BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002795
(880 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255568609|ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
gi|223535436|gb|EEF37106.1| GTP binding protein, putative [Ricinus communis]
Length = 1010
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/858 (57%), Positives = 614/858 (71%), Gaps = 50/858 (5%)
Query: 27 EIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTLKREFKMFRRAVAAKSGDP----LVG 82
+IQKHNRK K+ SQAQL+ SQ+QALAEE HFQTL E++ F +A+ ++ LVG
Sbjct: 177 QIQKHNRKITKV-SQAQLTASQKQALAEESHFQTLTSEYRTFTKAIKGETRSSTSGLLVG 235
Query: 83 KPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQL--GSDYFA 140
+PWERIER+K R++ S S +F G+ L E+LRELKE FE LNWVLD+D++L D+ +
Sbjct: 236 RPWERIERVKLREIVSGSNQFNGNKLNVESLRELKENFEDGLNWVLDNDIELENNDDWLS 295
Query: 141 KNVEWH--PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLK 198
+W P KR R++ E IR LVDRLS+R++T ++WK +IM QSGL F+EGQ++K+++
Sbjct: 296 SENQWQYDPAKRRRNDKEEIRFLVDRLSKRDVTVRDWKLAKIMKQSGLRFSEGQLMKIVE 355
Query: 199 GLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
GLG+KG W QAM+V++WVY K++RD KSRFVYTKLL++L RP EALRIFN M ED
Sbjct: 356 GLGNKGKWEQAMAVVEWVYNDKERRDSKSRFVYTKLLSVLRIERRPKEALRIFNSMREDH 415
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
NLYPD+AAYH +AVTLGQ G LKEL+K++E M+Q+PSKRI M K WDPVLEPD+V+YN
Sbjct: 416 NLYPDMAAYHVIAVTLGQAGNLKELLKIVECMKQQPSKRINKMCYKRWDPVLEPDIVIYN 475
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
AVLNACVP+ QWKGV WVF+QLRKSGLKP+ ATYGLAMEVML SGKYDLVHE FRKM +S
Sbjct: 476 AVLNACVPTQQWKGVAWVFEQLRKSGLKPNGATYGLAMEVMLNSGKYDLVHELFRKMNRS 535
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
GEA ALTYKVLVRAFWEEGK+NEA+ AVR+ME RGVVGTAS+YYELACCLC G WQDA
Sbjct: 536 GEAPKALTYKVLVRAFWEEGKVNEAMEAVRDMENRGVVGTASLYYELACCLCYYGMWQDA 595
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKV 498
ML V+K+K+LRHSKPLE+TFTGLI+SS+DGGH+ DCISIF++MK +C PNIGT+N MLKV
Sbjct: 596 MLEVKKMKNLRHSKPLEVTFTGLIMSSLDGGHVSDCISIFEYMKAYCVPNIGTINIMLKV 655
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
Y RND+FSKAKELF E N+ DG L PDE+TYSSMLEASA+A QWEYFE
Sbjct: 656 YGRNDLFSKAKELFGEIKGTNN--------DGTYLVPDEFTYSSMLEASASALQWEYFEL 707
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
VYK M G QLDQ KHA LLVEASR GK HLLEHAFD+ LEAGEIPH L FTEM+ QA
Sbjct: 708 VYKEMTFCGYQLDQKKHASLLVEASRVGKYHLLEHAFDAALEAGEIPHHLLFTEMVFQAT 767
Query: 619 VQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEI 678
Q NYE+AV L+N +A APF I+E+QW +LF+ N D+I++D LEKLL+AL + + A SE
Sbjct: 768 AQQNYERAVVLVNTLALAPFKISEKQWIDLFQKNGDKITQDGLEKLLDALRSSDVA-SEP 826
Query: 679 TVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHEAFDVKETENVPSSSASMM 738
TV+NLSR LH+LC + LS S G DV + + S S +M
Sbjct: 827 TVANLSRTLHSLCGRGRSEYLSGSTSLG---------------IDVTNSSYLDSGSRKIM 871
Query: 739 FENA-DLGADPLPQKTDVAVDIDSINHSSLSRQADADT-EMFSKALSYIHSNDRPSNLCI 796
+ ++ D L KTD+A S+ S+ + DT E S +Y D +++C
Sbjct: 872 GDKGPEMHEDTLIDKTDIAYGDLSVTRSNTGGEGSDDTDEASSSPRNYSTDRDGIASICT 931
Query: 797 DMEGLADDWASSEHSDYLDKELAALYLSKQSQDNDVVDLQKSMNRVGGSRRSELPSASEI 856
+++ DD AS +D L D D ++ +N+V S ++LPSA EI
Sbjct: 932 NVKIFGDDEASGASTDCL--------------DFDEMEYGIPINQVDDSCGTKLPSADEI 977
Query: 857 LEAWKESREKDGIFFPFE 874
L+ WKESR K +FFPF+
Sbjct: 978 LDIWKESR-KGRLFFPFQ 994
>gi|356565493|ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Glycine max]
Length = 865
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/873 (56%), Positives = 619/873 (70%), Gaps = 46/873 (5%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTL 61
+KI+++L++ GV PTPKI+ ++RKKEIQKHNRK K Q L+ +Q QA AEEQH +T+
Sbjct: 21 DKIRRRLIEKGVQPTPKIVHTLRKKEIQKHNRK-LKAQPAPPLTQAQAQAAAEEQHLETI 79
Query: 62 KREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLA--SESKEFAGDNLKRENLRELKEM 119
KREF RR +A GKPWE I++++F + A E G+ L+RE+L ELKEM
Sbjct: 80 KREF---RRVMA--------GKPWEGIQKVEFLEKARRPERDCGGGEKLRRESLTELKEM 128
Query: 120 FE----KDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNW 175
FE +L WV D D+++ +F + + + RSE E IR LV RLS++E+T K+W
Sbjct: 129 FEARKMDELKWVFDADLEIDEVWFDEGYGARGKTQKRSEVEVIRFLVHRLSDKEITMKDW 188
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
KF R+M SGL FTEGQ+L++++ LG K W+QA+SV+ WVY KD R +SRFVYTKLL
Sbjct: 189 KFSRMMKMSGLPFTEGQLLRIVELLGFKRCWKQALSVVQWVYNYKDHRKFQSRFVYTKLL 248
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
++LGKAGRP+EAL+IFN+M E ++YPDIAAYHSVAVTLGQ GLLKEL+ ++E MRQKP
Sbjct: 249 SVLGKAGRPNEALQIFNMMRESIHIYPDIAAYHSVAVTLGQAGLLKELLNIVECMRQKPK 308
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
MHRKNWDPVLEPD+V+YNAVLNACVPS QWKGV WVFKQLRKSGLKP+ ATYGLA
Sbjct: 309 AF---MHRKNWDPVLEPDVVIYNAVLNACVPSKQWKGVSWVFKQLRKSGLKPNGATYGLA 365
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
MEVML+SG YDLVHEFF KM +SGE ALTYKVLV+ FW+EGK+NEAV AVR+ME+RGV
Sbjct: 366 MEVMLESGNYDLVHEFFGKMKRSGEVPKALTYKVLVKTFWKEGKVNEAVKAVRDMERRGV 425
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+GTASVYYELACCLCNNGRWQDA+L V+ I+SL H+KPLE+TFTG+I SSMDGGHI+DCI
Sbjct: 426 IGTASVYYELACCLCNNGRWQDAILEVDNIRSLPHAKPLEVTFTGMIKSSMDGGHINDCI 485
Query: 476 SIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
IF++MK+HC PNIG +N MLKVY +NDMFSKAK LFEE A S Y G + + P
Sbjct: 486 CIFEYMKEHCVPNIGAINTMLKVYGQNDMFSKAKVLFEEVKVAKSEFYATPEGGYSSVVP 545
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
D Y+Y+SMLEASATA QWEYFE+VY+ M +SG QLDQ KH LLV+ASRAGK HLLEHAF
Sbjct: 546 DVYSYNSMLEASATAQQWEYFEHVYREMIVSGYQLDQDKHLSLLVKASRAGKLHLLEHAF 605
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 655
D +LEAGEIPH LFF E++IQAI Q NYE+AV LIN MAYAPF +TE+QWT LF+ +EDR
Sbjct: 606 DMILEAGEIPHHLFFFELVIQAIAQHNYERAVILINTMAYAPFRVTEKQWTNLFKESEDR 665
Query: 656 ISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPL 715
IS + LE+LL+AL NC+ SE+TVSNL+R+LH LC R+ SS FGS+ + +
Sbjct: 666 ISLENLERLLDALGNCDIV-SELTVSNLTRSLHVLCGLGTSRNFSSIIPFGSE----NSV 720
Query: 716 HGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLSRQADADT 775
+G++E D + NVP S MM E + D L + + + ++ ++D
Sbjct: 721 NGLNEGID--DDGNVPKISRRMMIEGVESKNDILVASYHTEPETIAFSRDQVNGGDNSDV 778
Query: 776 EMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQDNDVVDL 835
+F SYI +L D D+ A + SD LD+EL S+ V+D
Sbjct: 779 MVFRPQNSYIEDG---KSLYADSLECTDNLALDKSSDELDEELWDDGSSEDDDGEGVID- 834
Query: 836 QKSMNRVGGSRRSELPSASEILEAWKESREKDG 868
PSA EILE WKE RE+DG
Sbjct: 835 --------------KPSAYEILEVWKEMREEDG 853
>gi|449448456|ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Cucumis sativus]
gi|449499902|ref|XP_004160949.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Cucumis sativus]
Length = 860
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/883 (53%), Positives = 632/883 (71%), Gaps = 59/883 (6%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKI--QSQAQ---LSPSQQQALAEEQ 56
+KIK+ LL+ GV+PTP+I+RS+RKKEIQK+NRK ++ + AQ LS SQ+Q +AEE
Sbjct: 20 DKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQSAQSPPLSESQKQLIAEET 79
Query: 57 HFQTLKREFKMFRRAVAAK-SGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRE 115
HF TL+ E+K F +A+ AK +G +VG+PWER+ER+ F++L + D+LK+E+LRE
Sbjct: 80 HFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKELTGVRTGYNRDSLKKESLRE 139
Query: 116 LKEMFE----KDLNWVLDDDVQLGSDYF-AKNVEWHPEKRWRSEAEAIRVLVDRLSEREM 170
L+++FE ++ W LDDDV+L ++ ++N + KR R + E IR LVDRLS +
Sbjct: 140 LRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRRRGDGEVIRFLVDRLSSGPI 199
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
+ ++WKF R+M +SGL F EGQ+LK+L LG KG W+QA+SV++WVY LK KSRFV
Sbjct: 200 SMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNLKSHSHSKSRFV 259
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YTKLLA+LG A +P EAL+IFNLM D +YPD+AAYHS+AVTLGQ GLLK+L+K+IE M
Sbjct: 260 YTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIEFM 319
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RQ+PSK+++N RK+WDP +EPDLV+YNA+LNAC+P+ +WKGV+WVF QLRKSGL+P+ A
Sbjct: 320 RQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGA 379
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYGL+MEVML+SGKY+ +H F KM K+G+ + A TY+VLV+AFWEEG +N A+ AVR+M
Sbjct: 380 TYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGNVNGAIEAVRDM 439
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
EQRGVVG+ASVYYELACCLC NG+WQDA++ VEK+K+L H KPL +TFTG+I SS +GGH
Sbjct: 440 EQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGH 499
Query: 471 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
IDDCISIF++MK C PNIGT+N MLKVY RNDM+SKAK+LFEE R S S D
Sbjct: 500 IDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDLFEEIKRKADSS----SHDS 555
Query: 531 A--PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
A L PDEYTY+SMLEA+A++ QWEYFE VY+ MALSG QLDQ+KHA LLVEAS+AGK
Sbjct: 556 AVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALLLVEASKAGKW 615
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
+LL+HAFD++LEAG+IPHPL FTEM++Q Q NYE+AV L+ M YAPF ++ERQWTEL
Sbjct: 616 YLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTMGYAPFQVSERQWTEL 675
Query: 649 FESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQ 708
FE N DRI R+ L++LL+AL +C+A SE TVSNLSR+L +LC+ + + S S
Sbjct: 676 FEGNTDRIRRNNLKQLLHALGDCDA--SEATVSNLSRSLQSLCKFDIPENTSQSV----- 728
Query: 709 AIDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLS 768
A D H + + ++EN+ EN L D D ++DI ++H+SL+
Sbjct: 729 ACD----HDATDELQLPDSENM---------ENMKLHPD-----EDESLDIIPVDHASLN 770
Query: 769 RQADADTEMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQ 828
+ +++++M P ++ I L + + SD + + L +S+
Sbjct: 771 MKVNSESKM------------SPWSVSISDGAL----GTGQFSDGSNNVHSPFDLCGESE 814
Query: 829 DNDVVDLQKSMNRVGGSRRSELPSASEILEAWKESREKDGIFF 871
D D +L ++ + S LP+ +EILE WKE R+ DG+F
Sbjct: 815 D-DEEELNTLLDEFDDAYDSNLPAVNEILETWKEERKADGLFL 856
>gi|357476491|ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509586|gb|AES90728.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 877
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/882 (54%), Positives = 609/882 (69%), Gaps = 56/882 (6%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSP----SQQQALAEEQH 57
+KI++ L++ GV PTPKI+ ++RKK+IQKHNRK + Q QL+P SQ+Q L EEQH
Sbjct: 25 DKIRRSLIQKGVTPTPKIIHTLRKKQIQKHNRK---LNRQNQLNPPLSKSQKQTLEEEQH 81
Query: 58 FQTLKREFKMFRRAV----AAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENL 113
FQ LK E+K F + + G L+GKPWE +E++ F + + E G+ LKRE+L
Sbjct: 82 FQELKHEYKQFTQNLEENQGGNKGLCLIGKPWEGVEKVDFLERIKVNYEHRGEKLKRESL 141
Query: 114 RELKEMFEK----DLNWVLDDDVQLGSDYFAKNVEWHPEKRW-RSEAEAIRVLVDRLSER 168
ELKEMF + +L WV +DD+++ +F +N +K RSE + +R LVDRL ++
Sbjct: 142 IELKEMFRERKMDELKWVFEDDIEINEVWFDENNNGKRKKTSKRSEVQVVRFLVDRLCDK 201
Query: 169 EMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR 228
E+ AK+WKF R+M SGL FTEGQ++ +++ LG K W+QA+SV+ WVY KD R +SR
Sbjct: 202 EIRAKDWKFSRLMKLSGLSFTEGQLMMIIEMLGVKRCWKQALSVVQWVYNSKDHRKFQSR 261
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
FVYTKLLA+LGKA RP EAL+IFN+ML + +YPD+AAYHS+AVTLGQ GLLKEL+ ++E
Sbjct: 262 FVYTKLLAVLGKARRPKEALQIFNMMLGNIRVYPDMAAYHSIAVTLGQAGLLKELLNIVE 321
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MRQKP + +K M+RKNWDP LEPD+V+YNAVLNACVPS QWKGV WVF+Q+RKS LKP+
Sbjct: 322 CMRQKP-ETLKYMYRKNWDPTLEPDVVIYNAVLNACVPSKQWKGVSWVFQQMRKSSLKPN 380
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
ATYGLAMEVMLQSG YDLVHE F KM ++GE ALTYKV+VR FW+EGK++EAV AVR
Sbjct: 381 GATYGLAMEVMLQSGNYDLVHELFEKMQRNGEVPEALTYKVMVRTFWKEGKVDEAVKAVR 440
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+ME+RGV+GTASVYYELACCLCN GRWQDA L VEKIK L H+KPLE+TFTG+I SSMDG
Sbjct: 441 DMERRGVMGTASVYYELACCLCNCGRWQDATLEVEKIKRLPHAKPLEVTFTGMIRSSMDG 500
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
GHIDDCI IF++M+DHC PN+GTVN MLKVYS+NDMFS AK LFEE A S
Sbjct: 501 GHIDDCICIFEYMQDHCAPNVGTVNTMLKVYSQNDMFSTAKVLFEEVKVAKSD------- 553
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
L+PD YTY+ MLEAS+ HQWEYFE+VYK M LSG LDQ KH LLV+ASRAGK
Sbjct: 554 ----LRPDAYTYNLMLEASSRGHQWEYFEHVYKEMILSGYHLDQNKHLPLLVKASRAGKL 609
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
HLLEHAFD +LEAGEIPH LFF E++IQAI Q NYE+A+ L++ MA+AP+ +TE+QWTEL
Sbjct: 610 HLLEHAFDMVLEAGEIPHHLFFFELVIQAIAQHNYERAIILLSTMAHAPYRVTEKQWTEL 669
Query: 649 FESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQ 708
F+ NEDRI+ + L++LL+ L NCN SE T+SNLSR+LH LC R++SS F S+
Sbjct: 670 FKENEDRINHENLKRLLDDLGNCNVV-SEATISNLSRSLHDLCGLGSSRNISSIIPFRSE 728
Query: 709 AIDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLS 768
+D ++E + E P+ S MM E A+ G D L D+ + N +
Sbjct: 729 NVDC-----LNETINGGENGKAPNFSGRMMIEGAESGNDILFGGDQAEPDMFTFNDDQVD 783
Query: 769 RQADADTEMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQ 828
R + D + I S+ C+D ++LD+ L L K S
Sbjct: 784 RVNNNDVVVCRPQNRVIEDK---SSFCVD------------RPEFLDR----LTLDKSSD 824
Query: 829 DNDVVDLQKSMNRVGGSRRSEL---PSASEILEAWKESREKD 867
D++ E+ PSA +ILEAWKE RE+D
Sbjct: 825 DSEDELSDDESYEDDDDGDKEVIDKPSAYQILEAWKEMREED 866
>gi|334188692|ref|NP_201558.3| delayed greening 1 protein [Arabidopsis thaliana]
gi|223635752|sp|Q9FJW6.2|PP451_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g67570, chloroplastic; AltName: Full=Protein DELAYED
GREENING 1; AltName: Full=Protein EMBRYO DEFECTIVE 1408;
Flags: Precursor
gi|332010978|gb|AED98361.1| delayed greening 1 protein [Arabidopsis thaliana]
Length = 798
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/698 (62%), Positives = 547/698 (78%), Gaps = 20/698 (2%)
Query: 1 MEKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAK-IQSQAQL-SPSQQQALAEEQHF 58
MEKIK++LLK+GV PTPKIL ++RKKEIQKHNR+ + +S+A++ + +Q+Q++ EE F
Sbjct: 23 MEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEAEVYTEAQKQSMEEEARF 82
Query: 59 QTLKREFKMFRRAVAAKSGDP---LVGKPWERIERLKFRQLAS--ESKEFAGDNLKRENL 113
QTL+RE+K F R+++ K G +VG PWE IER+K ++L S +E + LK+ENL
Sbjct: 83 QTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVSAGELKKENL 142
Query: 114 RELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAK 173
+ELK++ EKDL WVLDDDV + K E+ P KRWR+E EA+RVLVDRLS RE+ K
Sbjct: 143 KELKKILEKDLRWVLDDDVDVEEFDLDK--EFDPAKRWRNEGEAVRVLVDRLSGREINEK 200
Query: 174 NWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK 233
+WKFVR+MNQSGL FTE QMLK++ LG K SW+QA +V+ WVY K ++ L+SRFVYTK
Sbjct: 201 HWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTK 260
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL++LG A RP EAL+IFN ML D LYPD+AAYH +AVTLGQ GLLKEL+K+IERMRQK
Sbjct: 261 LLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQK 320
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
P+K KN+ +KNWDPVLEPDLVVYNA+LNACVP+ QWK V WVF +LRK+GL+P+ ATYG
Sbjct: 321 PTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYG 380
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
LAMEVML+SGK+D VH+FFRKM SGEA A+TYKVLVRA W EGKI EAV AVR+MEQ+
Sbjct: 381 LAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQK 440
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
GV+GT SVYYELACCLCNNGRW DAML V ++K L + +PLEITFTGLI +S++GGH+DD
Sbjct: 441 GVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDD 500
Query: 474 CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
C++IFQ+MKD C+PNIGT N MLKVY RNDMFS+AKELFEE +S L
Sbjct: 501 CMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEE----------IVSRKETHL 550
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
P+EYTYS MLEASA + QWEYFE+VY+ M LSG Q+DQTKHA +L+EASRAGK LLEH
Sbjct: 551 VPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEH 610
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNE 653
AFD++LE GEIPHPLFFTE+L A + ++++A+ LIN +A A F I+E +WT+LFE ++
Sbjct: 611 AFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQISEEEWTDLFEEHQ 670
Query: 654 DRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 691
D +++D L KL + L C+ SE TVSNLS++L + C
Sbjct: 671 DWLTQDNLHKLSDHLIECDYV-SEPTVSNLSKSLKSRC 707
>gi|297797625|ref|XP_002866697.1| EMB1408 [Arabidopsis lyrata subsp. lyrata]
gi|297312532|gb|EFH42956.1| EMB1408 [Arabidopsis lyrata subsp. lyrata]
Length = 621
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/595 (63%), Positives = 475/595 (79%), Gaps = 19/595 (3%)
Query: 1 MEKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAK-IQSQAQL-SPSQQQALAEEQHF 58
MEKIK++LLK+GV PTPKIL ++RKKEIQKHNR+ + +S+A++ + +Q+Q++ EE F
Sbjct: 23 MEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEAEVYTEAQKQSMEEEARF 82
Query: 59 QTLKREFKMFRRAVAAKSGDP---LVGKPWERIERLKFRQLAS--ESKEFAGDNLKRENL 113
QTL+RE+K F R+++ KSG +VG PWE IER+K ++L S +E +G LK+ENL
Sbjct: 83 QTLRREYKQFTRSISGKSGGDVGLMVGNPWEGIERVKLKELVSGVRREEVSGGELKKENL 142
Query: 114 RELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAK 173
+ELK++ EKDL WVL+DDV + + + + E+ P KRWR+E EA+RVLVDRLS RE+T K
Sbjct: 143 KELKKILEKDLRWVLEDDVDV--EEYDLDKEFDPAKRWRTEGEAVRVLVDRLSGREITEK 200
Query: 174 NWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK 233
+WKFVRIMNQSGL F+E QMLK++ LG K SW+QA +V+ WVY K ++ +SRFVYTK
Sbjct: 201 HWKFVRIMNQSGLQFSEDQMLKIVDRLGRKNSWKQASAVVHWVYSDKKRKHNRSRFVYTK 260
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL++LG A RP EAL+IF+ ML D LYPD+AAYHS+AVTLGQ GLLKEL+K+IE MRQK
Sbjct: 261 LLSVLGFARRPKEALQIFSEMLGDRQLYPDMAAYHSIAVTLGQAGLLKELLKVIEHMRQK 320
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
P+K +KN+ ++NWD VLEPDLVVYNA+LNACVP+ QWK V WVF +LRK+GL+P+ ATYG
Sbjct: 321 PTKLMKNLRQRNWDHVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYG 380
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
LAMEVML+SGKYD VH+FFRKM SGEA A+TYKVLVRA W EGKI EAV AVR+MEQ+
Sbjct: 381 LAMEVMLESGKYDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQK 440
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
GV+GT SVYYELACCLCNNGRW+DAML V ++K L + +PLEITFTGLI +S++GGH+DD
Sbjct: 441 GVIGTGSVYYELACCLCNNGRWRDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDD 500
Query: 474 CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
C++IFQ+MKD C+PNIGT N ML+VY RNDMFS+AKELFEE +S L
Sbjct: 501 CMAIFQYMKDKCDPNIGTANMMLRVYGRNDMFSEAKELFEE----------IVSRKETHL 550
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
P+EYTY+ MLEASA + QWEYFE+VY+ M LSG Q+DQ KHA +L+EASRAGK
Sbjct: 551 VPNEYTYNFMLEASARSLQWEYFEHVYQLMILSGYQMDQAKHASMLIEASRAGKV 605
>gi|224097262|ref|XP_002310894.1| predicted protein [Populus trichocarpa]
gi|222853797|gb|EEE91344.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/511 (69%), Positives = 418/511 (81%), Gaps = 11/511 (2%)
Query: 80 LVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSDYF 139
LVGKPWERIER+K +++ S S+EF G LKRENLR+LKE+FE +L WV DDD+ + +
Sbjct: 1 LVGKPWERIERVKLKEIGSGSREFNGGKLKRENLRQLKEVFEGNLKWVFDDDIDVEDSDW 60
Query: 140 AKNV---EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKL 196
++ +W P KRWR E EAIR LVDRLS RE++ K+WK +IM QSGL F+EGQ+LK+
Sbjct: 61 LRSGSEEKWDPAKRWRGEGEAIRFLVDRLSCREVSVKDWKLAKIMKQSGLRFSEGQLLKI 120
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
++ LG+KG W QAM+V++WVY K++RD KSRFVYTKLL++LGK R EAL IFNLM E
Sbjct: 121 VEELGNKGKWSQAMAVVEWVYNDKERRDCKSRFVYTKLLSVLGKERRAQEALSIFNLMRE 180
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
D +YPD+AAYHS+AVTLGQ GLLKELVK+IE MRQKPSKRI M KNWDPVLEPDLV+
Sbjct: 181 DRRIYPDMAAYHSIAVTLGQTGLLKELVKVIECMRQKPSKRINKMLNKNWDPVLEPDLVI 240
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YNA+LNACVPS QWKGV WVF+QLR+SGLKP+ ATYGLAMEVML SGKY VHE+FRKM
Sbjct: 241 YNAILNACVPSQQWKGVSWVFQQLRRSGLKPNGATYGLAMEVMLLSGKYKSVHEYFRKMK 300
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
KSGE++ ALTYKVLVRAFWEEG++NEAV AVR+MEQRGVVG ASVYYELACCLC NGRWQ
Sbjct: 301 KSGESLKALTYKVLVRAFWEEGRVNEAVEAVRDMEQRGVVGAASVYYELACCLCYNGRWQ 360
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML 496
DAML VEK+K LR+ KPLE++ TG+I SSMDGGHID+CISIF+HMK HC PNIGT+N ML
Sbjct: 361 DAMLEVEKMKRLRYKKPLEVSLTGMIASSMDGGHIDNCISIFEHMKAHCVPNIGTINTML 420
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
KVYSR+D+FS+AKELFE+ + SG T + PD YTYSSMLE SA A QWEYF
Sbjct: 421 KVYSRSDLFSEAKELFEDIKGVDHSGTTII--------PDGYTYSSMLEVSARALQWEYF 472
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
EYVYK M+ SG QLDQ KHA LLVEASR+GK
Sbjct: 473 EYVYKEMSFSGYQLDQIKHAPLLVEASRSGK 503
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 20/250 (8%)
Query: 379 GEAIGALTYKVLVRAF----WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
GEAI L ++ R W+ KI M+Q G+ + ++ L N G+
Sbjct: 79 GEAIRFLVDRLSCREVSVKDWKLAKI---------MKQSGLRFSEGQLLKIVEELGNKGK 129
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG--HIDDCISIFQHMKD--HCEPNIG 490
W AM VVE + + + + + F + S+ G + +SIF M++ P++
Sbjct: 130 WSQAMAVVEWVYNDKERRDCKSRFVYTKLLSVLGKERRAQEALSIFNLMREDRRIYPDMA 189
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT-FLSGDGAP-LKPDEYTYSSMLEASA 548
+++ + + + ++ E + S L+ + P L+PD Y+++L A
Sbjct: 190 AYHSIAVTLGQTGLLKELVKVIECMRQKPSKRINKMLNKNWDPVLEPDLVIYNAILNACV 249
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ QW+ +V++ + SG + + + + +GK + F + ++GE L
Sbjct: 250 PSQQWKGVSWVFQQLRRSGLKPNGATYGLAMEVMLLSGKYKSVHEYFRKMKKSGESLKAL 309
Query: 609 FFTEMLIQAI 618
+ ++L++A
Sbjct: 310 TY-KVLVRAF 318
>gi|357121315|ref|XP_003562366.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/715 (49%), Positives = 477/715 (66%), Gaps = 33/715 (4%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALA--EEQHFQ 59
E ++++LL+ GV PTPKIL ++RKKE K R+ K S A P+ + +L EE F+
Sbjct: 34 ETLRRRLLRKGVSPTPKILHTLRKKEAHKSLRRARKDTSTANAPPTTEDSLVAQEEARFR 93
Query: 60 TLKREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEM 119
E+++ L+G+PW+ AS + E L L+EM
Sbjct: 94 AAAEEYRV------------LMGRPWDG---------ASSASGPPRGTTGNEGLGGLREM 132
Query: 120 FE----KDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEA----EAIRVLVDRLSEREMT 171
E + W+L+DDV+ G A + W SE I +LV RLSE +++
Sbjct: 133 LEARRSDGVRWLLEDDVEKGEADDANRKQRRVGSGWISEVGDEERRIELLVSRLSEGDLS 192
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVY 231
+W+ R+M Q+ L++ E +L++LK L +G+WRQA++V +WVY + +SRFVY
Sbjct: 193 LGDWRLSRMMKQADLIYNEDNLLQILKRLETQGNWRQAVAVTEWVYNENTYKHRRSRFVY 252
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
TKLL+ILGK+ P EALR+F +ML D +YPD+AAYHS+AVTLG+ GLL EL+K+I+ MR
Sbjct: 253 TKLLSILGKSLVPTEALRVFKIMLGDAQIYPDMAAYHSIAVTLGRAGLLNELIKIIDYMR 312
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
QKPSKR+ M RK+WDP+LEPDL++YN+VLNACV S QWKGVFWVFK++R GL P+ AT
Sbjct: 313 QKPSKRVMRMRRKDWDPLLEPDLIIYNSVLNACVLSQQWKGVFWVFKKMRFGGLTPTGAT 372
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
+GLAMEVML++ KYD V +FF KM + G A+TYKVLVRAFWE+GK+NEAV AV +ME
Sbjct: 373 FGLAMEVMLKAKKYDFVQKFFEKMQRKGVPPRAITYKVLVRAFWEQGKVNEAVEAVEDME 432
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
QRG+VG ASVYYELACCLCN G+W++AML VEK++ LR +KPLE FTG+I++S DGG++
Sbjct: 433 QRGIVGAASVYYELACCLCNKGKWKEAMLQVEKLEQLRLTKPLEYVFTGMILASFDGGYM 492
Query: 472 DDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+CISIF+ MKD+C PNIGT+N MLKVY R+DMF KAK+LFE TT + SS ++ D +
Sbjct: 493 SECISIFESMKDYCAPNIGTINVMLKVYGRSDMFVKAKDLFETTTCSFSSSQPYIC-DHS 551
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L+ D YTYSSMLEASA A QWEYFE Y+ M LS LDQ+K++WLL++ASRAGK +LL
Sbjct: 552 TLQADAYTYSSMLEASAHAQQWEYFENAYRRMILSHHHLDQSKYSWLLIKASRAGKPYLL 611
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
EHA +S+L+ GE P FTE + Q I S+Y + + L+N M+ A + E QW++L +
Sbjct: 612 EHALNSILDRGETPDVQLFTENVCQTIAHSDYGRTLCLLNFMSAASVDVNELQWSDLLQQ 671
Query: 652 NEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFG 706
N R S + L+ LL L + + +S RAL + + E+D S A G
Sbjct: 672 NMFRFSVNALKDLLMHLSTGDTIERDPALS-FVRALQSQYATFVEKDTSFLADCG 725
>gi|242040507|ref|XP_002467648.1| hypothetical protein SORBIDRAFT_01g031600 [Sorghum bicolor]
gi|241921502|gb|EER94646.1| hypothetical protein SORBIDRAFT_01g031600 [Sorghum bicolor]
Length = 872
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/870 (44%), Positives = 535/870 (61%), Gaps = 71/870 (8%)
Query: 12 GVFPTPKILRSIRKKEIQKHNRKQAK-----IQSQAQLSPSQQQALAEEQHFQTLKREFK 66
GV PTPK+L +IRKKE K R+ K + A L+P ++ AE++
Sbjct: 50 GVSPTPKVLHTIRKKEALKALRRARKDTAAAAAAAASLNPCGEEIGAEDEEEAR------ 103
Query: 67 MFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDL-N 125
AA LVG+PW+ R + + + + E LRE+ D+
Sbjct: 104 ---FRAAAAEYRALVGRPWDAGARG-----VAPPRGWDAEEGGLEGLREMLVARRGDVFR 155
Query: 126 WVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEA----IRVLVDRLSEREMTAKNWKFVRIM 181
W+LDDD++ +D + + P W +AE I++LV RL+ ++ ++W+ R+M
Sbjct: 156 WLLDDDIE--ADAAERKQQKRPGTGWDVDAEEEERRIQLLVSRLNGDYLSFRDWRLTRMM 213
Query: 182 NQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKA 241
++ ++++E +L++L GL +G+WRQA++V++WVY R KSRFVYTKLL++LGK+
Sbjct: 214 KKADIIYSEDNLLRILDGLEARGNWRQALAVIEWVYNENSYRHRKSRFVYTKLLSVLGKS 273
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
R +EALR+F +M D +YPD+ AYHS+AVTLG+ GLLKEL+K+IE MRQKPSKR+ NM
Sbjct: 274 LRANEALRVFTIMRRDPQIYPDMPAYHSIAVTLGRAGLLKELIKIIEYMRQKPSKRVMNM 333
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
RK WDP LEPD++VYN+VLNACV S QWKGVFWVF+Q+R SGL P+ AT+GLAMEVML+
Sbjct: 334 RRKGWDPSLEPDVLVYNSVLNACVLSQQWKGVFWVFQQMRISGLPPTGATFGLAMEVMLK 393
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+ KYD V +F+ KM K+G A+TYKVLVRAFWE+GKINEAV AV +MEQRGVVG ASV
Sbjct: 394 AKKYDFVQKFYEKMQKNGVPPRAITYKVLVRAFWEQGKINEAVEAVNDMEQRGVVGAASV 453
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
YYELACCLCNN RW+DAML VEK+K L +KPLE TFTG+I++S +GG+I DCISIF+ M
Sbjct: 454 YYELACCLCNNRRWRDAMLQVEKLKQLPLTKPLEYTFTGMILASFNGGYIYDCISIFESM 513
Query: 482 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
KDHC PNIGTVN MLKVY R DMF KAK+LFE T S+ T++ + + LK D YTYS
Sbjct: 514 KDHCTPNIGTVNVMLKVYGRCDMFGKAKDLFETTKACFSNSQTYIH-EHSSLKADTYTYS 572
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
SMLEASA+A QWEYFEYVY+ M LS LDQ+K++WLL++A RAGK +LLEHA DS+LE
Sbjct: 573 SMLEASASAQQWEYFEYVYREMVLSHHCLDQSKYSWLLIKACRAGKSNLLEHALDSILER 632
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL 661
GEIP TE++ Q+I +Y + + L+N M A + E +W L + N + + D L
Sbjct: 633 GEIPDVQLITELICQSIAHRDYRRTLQLLNIMTEASIKMKEVEWVYLLQKNVYQFNIDAL 692
Query: 662 EKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHEA 721
E + L +++ + L RAL + C I+ + G +
Sbjct: 693 EGFIKYLSTSGTINADPAL-GLVRALESQC-------------------GITLVKGPYLL 732
Query: 722 FDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLSRQADADTEMFSKA 781
D T+ S + E+ D A K D + +++ + D+D E+
Sbjct: 733 TDDTTTQQCGLS----LLESEDKYASSSLAKQD-QLTCENLCTDIILDVPDSDREIPQFG 787
Query: 782 LSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQDNDVVD-LQKSMN 840
+S + S D + + + L D EHSD L +Q +D + SMN
Sbjct: 788 VSVVMSRD----ISLSGQRLED---KHEHSD----------LGQQRPQVSAIDEVLDSMN 830
Query: 841 RVGGSRRSELPSASEILEAWKESREKDGIF 870
G + E+PSASEILE W++ R +G+F
Sbjct: 831 PYGVNSYEEMPSASEILELWEQER-INGMF 859
>gi|115463141|ref|NP_001055170.1| Os05g0315100 [Oryza sativa Japonica Group]
gi|113578721|dbj|BAF17084.1| Os05g0315100 [Oryza sativa Japonica Group]
gi|222631083|gb|EEE63215.1| hypothetical protein OsJ_18025 [Oryza sativa Japonica Group]
Length = 874
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/884 (44%), Positives = 538/884 (60%), Gaps = 73/884 (8%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAK-IQSQAQLSPSQQQALAEEQHFQT 60
E ++++LL+ GV PTPKIL ++RKKE K R+ K + A + + AL E+
Sbjct: 37 ETLRRRLLRKGVSPTPKILHALRKKEALKSLRRARKDTAAAAAAAEAASNALPREEDGAA 96
Query: 61 LKREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRE-LKEM 119
+ E R A L+G+PW A G+ + LRE L
Sbjct: 97 VVGEDDEARFRAAVAEYRALMGRPWHGGAS------APPRGALRGEGEGLDGLREMLAAR 150
Query: 120 FEKDLNWVLDDDVQLGSDYFAK-------NVEWHPEKRWRSEAEAIRVLVDRLSEREMTA 172
W+L+DD + A V W+ + +R E I LV RL+E +++
Sbjct: 151 RAGKFEWLLEDDDVEEGEEEAAVGRRGRAGVGWNSD--FRDEERRIESLVRRLNEDDLSM 208
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT 232
++W+ R+M ++ L++ E +L++L+GL +G+WRQA+SV +WVY + KSRFVYT
Sbjct: 209 RDWRLTRLMKKADLIYNEDNLLQILEGLEARGNWRQALSVTEWVYNENIYKHRKSRFVYT 268
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
KLL+ILGKA RP EALR+F +M D +YPD+AAYHS+AVTLG+ GLL EL+K+IE MRQ
Sbjct: 269 KLLSILGKAWRPTEALRVFTIMRSDAQIYPDMAAYHSIAVTLGRAGLLNELIKIIEYMRQ 328
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
KPSKR+ M RK+WDP LEPD+++YN+VLNACV S QWKGVFWVF+Q+R++ L P+ AT+
Sbjct: 329 KPSKRVMKMRRKDWDPSLEPDVLIYNSVLNACVLSQQWKGVFWVFQQMRRNSLIPTGATF 388
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
GLAMEVML++ KYD V +FF+KM KSG A+TYKVLVRA+WE+GK+NEAV AV++MEQ
Sbjct: 389 GLAMEVMLKAKKYDFVQKFFQKMQKSGVPPRAITYKVLVRAYWEQGKVNEAVEAVKDMEQ 448
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
RG+VG ASVYYELACCLCN GRW+DA+ VEK+K L +KPLE TFTG+I++S DGG+I
Sbjct: 449 RGIVGAASVYYELACCLCNKGRWRDALSQVEKLKQLPLTKPLEFTFTGMILASFDGGYIS 508
Query: 473 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+CISIF+ M+ HC PNIGT+N M+KVY R DMF KA++LF ET + N S + +
Sbjct: 509 ECISIFESMEGHCAPNIGTINVMIKVYGRCDMFVKARDLF-ETIKVN-----LPSSNHSS 562
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
K D YTYSSMLEA+A+A QWEYFE VY+ M LS LDQ+K++W+L++AS+AGK +LLE
Sbjct: 563 HKADAYTYSSMLEAAASAQQWEYFENVYREMTLSQYHLDQSKYSWMLIKASKAGKSYLLE 622
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESN 652
HA DS+LE GE P+ F+EM+ Q I Q NY K + LIN MA A ++E QW++L E N
Sbjct: 623 HALDSILERGETPNVQLFSEMICQTIAQRNYAKTLHLINIMAEASTDVSELQWSKLLEQN 682
Query: 653 EDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSA---HFGSQA 709
R S + L+ LL L + S+ + +S AL + C + D S A + G
Sbjct: 683 MHRFSVNALKDLLKYLSTSDIIKSDPELCFVS-ALQSQCGTTFVNDTSFVADGTYTGQSQ 741
Query: 710 IDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSIN-HSSLS 768
+ + EN+ SS S ++D ++ +SL+
Sbjct: 742 LSLP--------------ENITKSSNS---------------------NLDQLSCMNSLN 766
Query: 769 RQADADTEMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAAL--YLSKQ 826
D ++ S+ YI + + GL++D H + KE L +
Sbjct: 767 TNVFPDEKVSSEFSDYIMNTPQSDA----NAGLSEDIVIGSHFESEQKEQHDLGWLGTGV 822
Query: 827 SQDNDVVDLQKSMNRVGGSRRSELPSASEILEAWKESREKDGIF 870
S ++V+D SMN G E+PSASEILE W++ R +G F
Sbjct: 823 SAVDEVLD---SMNLYGDGSCGEMPSASEILELWEQDR-INGTF 862
>gi|125551793|gb|EAY97502.1| hypothetical protein OsI_19428 [Oryza sativa Indica Group]
Length = 874
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/887 (43%), Positives = 539/887 (60%), Gaps = 79/887 (8%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAK-IQSQAQLSPSQQQALAEEQHFQT 60
E ++++LL+ GV PTPKIL ++RKKE K R+ K + A + + AL E+
Sbjct: 37 ETLRRRLLRKGVSPTPKILHALRKKEALKSLRRARKDTAAAAAAAEAASNALPREEDGAA 96
Query: 61 LKREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMF 120
+ E R A L+G+PW + + + E L L+EM
Sbjct: 97 VVGEDDEARFRAAVAEYRALMGRPWHG---------GASTPPRGALRGEGEGLDGLREML 147
Query: 121 EK----DLNWVLDDDVQLGSDYFAK-------NVEWHPEKRWRSEAEAIRVLVDRLSERE 169
W+L+DD + A V W+ + +R E I LV RL+E +
Sbjct: 148 AARRAGKFEWLLEDDDVEEGEEEAAVGRRGRAGVGWNSD--FRDEERRIESLVRRLNEDD 205
Query: 170 MTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF 229
++ ++W+ R+M ++ L++ E +L++L+GL +G+WRQA+SV +WVY + KSRF
Sbjct: 206 LSMRDWRLTRLMKKADLIYNEDNLLQILEGLEARGNWRQALSVTEWVYNENIYKHRKSRF 265
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VYTKLL+ILGKA RP EALR+F +M D +YPD+AAYHS+AVTLG+ GLL EL+K+IE
Sbjct: 266 VYTKLLSILGKAWRPTEALRVFTIMRSDAQIYPDMAAYHSIAVTLGRAGLLNELIKIIEY 325
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MRQKPSKR+ M RK+WDP LEPD+++YN+VLNACV S QWKGVFWVF+Q+R++ L P+
Sbjct: 326 MRQKPSKRVMKMRRKDWDPSLEPDVLIYNSVLNACVLSQQWKGVFWVFQQMRRNSLIPTG 385
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
AT+GLAMEVML++ KYD V +FF+KM KSG A+TYKVLVRA+WE+GK+NEAV AV++
Sbjct: 386 ATFGLAMEVMLKAKKYDFVQKFFQKMQKSGVPPRAITYKVLVRAYWEQGKVNEAVEAVKD 445
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
MEQRG+VG ASVYYELACCLCN GRW+DA+ VEK+K L +KPLE TFTG+I++S DGG
Sbjct: 446 MEQRGIVGAASVYYELACCLCNKGRWRDALSQVEKLKQLPLTKPLEFTFTGMILASFDGG 505
Query: 470 HIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+I +CISIF+ M+ HC PNIGT+N M+KVY R DMF KA++LF ET + N S +
Sbjct: 506 YISECISIFESMEGHCAPNIGTINVMIKVYGRCDMFVKARDLF-ETIKVN-----LPSSN 559
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+ K D YTYSSMLEA+A+A QWEYFE VY+ M LS LDQ+K++W+L++AS+AGK +
Sbjct: 560 HSSHKADAYTYSSMLEAAASAQQWEYFENVYREMTLSQYHLDQSKYSWMLIKASKAGKSY 619
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
LLEHA DS+LE GE P+ F+EM+ Q I Q NY K + LIN MA A ++E QW++L
Sbjct: 620 LLEHALDSILERGETPNVQLFSEMICQTIAQRNYAKTLHLINIMAEASTDVSELQWSKLL 679
Query: 650 ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSA---HFG 706
E N R S + L+ LL L + S+ + +S AL + C + D S A + G
Sbjct: 680 EQNMHRFSVNALKDLLKYLSTSDIIKSDPELCFVS-ALQSQCGTTFVNDTSFVADGTYTG 738
Query: 707 SQAIDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSIN-HS 765
+ + EN+ SS S ++D ++ +
Sbjct: 739 QSQLSLP--------------ENITKSSNS---------------------NLDQLSCMN 763
Query: 766 SLSRQADADTEMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAAL--YL 823
SL+ D ++ S+ YI + + GL++D H + KE L
Sbjct: 764 SLNTNVFPDEKVSSEFSDYIMNTPQSDA----NAGLSEDIVIGSHFESEQKEQHDLGWLG 819
Query: 824 SKQSQDNDVVDLQKSMNRVGGSRRSELPSASEILEAWKESREKDGIF 870
+ S ++V+D SMN G E+PSASEILE W++ R +G F
Sbjct: 820 TGVSAVDEVLD---SMNLYGDGSCGEMPSASEILELWEQDR-INGTF 862
>gi|385269624|gb|AFI56571.1| PPR8522 [Zea mays]
gi|414874088|tpg|DAA52645.1| TPA: hypothetical protein ZEAMMB73_282844 [Zea mays]
Length = 832
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/868 (44%), Positives = 525/868 (60%), Gaps = 78/868 (8%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTL 61
E ++++ L+ GV PTPKIL ++RKKE K R+ A+ + A + S+ EE F+
Sbjct: 38 ETLRRRFLRRGVSPTPKILHTLRKKEALKALRR-ARKDTAAAATASRNPCDEEETRFRAA 96
Query: 62 KREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFE 121
E+ L G+PW+ R + + G+ E LRE+
Sbjct: 97 AAEYHA------------LAGRPWDAGTRG-----MAPPRGLDGEEGGLEGLREMLAARR 139
Query: 122 KD-LNWVLDDDVQLGSDYFAKNVEWHPEKRW----RSEAEAIRVLVDRLSEREMTAKNWK 176
D W+LDDD++ ++ + + P W E I++LV RL+ ++ ++W+
Sbjct: 140 GDGFRWLLDDDIE--AEAAERKQQRRPGAGWDVGTEDEERRIQLLVSRLNGDYLSFRDWR 197
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
R+M ++ ++++E +L++L GL +G+WRQA+S+++WVY R KSRFVYTKLL+
Sbjct: 198 LTRVMKRADIIYSEDNLLRILDGLEARGNWRQALSIIEWVYNENSYRHRKSRFVYTKLLS 257
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
ILGK+ R EAL IF +M D +YPD+ AYH +AVTLG+ GLLKEL+K+IE MRQKPSK
Sbjct: 258 ILGKSLRATEALHIFTIMRGDAQIYPDMPAYHCIAVTLGRAGLLKELIKIIEYMRQKPSK 317
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+ M RK+WDP LEPD++VYN+VLNACV S QWKGVFWVF+Q+R GL P+ ATYGLAM
Sbjct: 318 LVMKMRRKDWDPSLEPDVLVYNSVLNACVLSQQWKGVFWVFQQMRIGGLPPTGATYGLAM 377
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
EVML++ KYD V +F+ KM K+G A+TYKVLVR+FWE+ KINEAV AV +MEQRGVV
Sbjct: 378 EVMLKAKKYDFVQKFYEKMQKNGVPPRAITYKVLVRSFWEQDKINEAVEAVNDMEQRGVV 437
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
G ASVYYELACCLCNNGRW+DAML VEK+K L +KPLE FTG+I++S +GG+I DCIS
Sbjct: 438 GAASVYYELACCLCNNGRWRDAMLQVEKLKQLPLTKPLEYAFTGMILASFNGGYIYDCIS 497
Query: 477 IFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
IF+ MKDHC PNIGTVN MLKVY DMF KAK+LFE T + T++ + + K D
Sbjct: 498 IFELMKDHCMPNIGTVNVMLKVYGHCDMFGKAKDLFETTKACFLNSQTYIH-EHSSFKAD 556
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
YTY+SMLEASA+A QWEYFEYVY+ MALS LDQ+K++WLL++A RAGK +LLEHA D
Sbjct: 557 TYTYNSMLEASASAQQWEYFEYVYREMALSHHCLDQSKYSWLLIKACRAGKPYLLEHALD 616
Query: 597 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRI 656
S+LE GEIP TE + Q+I +Y + + L+N M A I E +W L + N +
Sbjct: 617 SILERGEIPDVQLITESICQSIAHRDYGRTLQLLNIMTQASIKIKEVEWDYLLQQNMHQF 676
Query: 657 SRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLH 716
S D LE L+ L + N ++ +L RAL + CR + +Q ++S H
Sbjct: 677 SIDALEGLIKYL-STNGTTNADPAVDLVRALQSQCRDDT----------STQQFELS-FH 724
Query: 717 GIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLSRQADADTE 776
G + S S + E L L TD+ +D+ +D E
Sbjct: 725 GSGNKY-----------SCSSLAELDQLTCKNL--CTDIILDVPG-----------SDRE 760
Query: 777 MFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQDNDVVDLQ 836
M +S + +C D+ L ++H EL+ L + Q + + +
Sbjct: 761 MPQLGVSAL--------MCRDI-SLNGQRVENKH------ELSDLG-QRGPQVSAIDKVL 804
Query: 837 KSMNRVGGSRRSELPSASEILEAWKESR 864
SMN G + E+PSAS+ILE W+ R
Sbjct: 805 DSMNSYGDNSYGEMPSASKILELWEHER 832
>gi|326511679|dbj|BAJ91984.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528463|dbj|BAJ93413.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 844
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/708 (49%), Positives = 475/708 (67%), Gaps = 37/708 (5%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAK-IQSQAQLSPSQQQALA--EEQHF 58
E ++++LL+ GV TPKIL ++RKKE K R+ K + +P ++ AL EE F
Sbjct: 38 ETLRRRLLRKGVSATPKILHALRKKEAGKSLRRARKEAATATATAPPKEDALVAEEEARF 97
Query: 59 QTLKREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKE 118
+ E+++ L+G+PW R + + +G++ L L++
Sbjct: 98 RAAAEEYRV------------LMGRPWH-----GARGVVGPPRAASGED----GLVGLRK 136
Query: 119 MFEKD----LNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEA----EAIRVLVDRLSEREM 170
M E+ W+LD DV+ A+ + W SE I +LV RL+E ++
Sbjct: 137 MLEERSGDRFQWLLDGDVENEGVEDARGKQRRVGSGWISEVGDEERRIELLVSRLNEVDL 196
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
++ +W+ R+M Q+ L++ E +L++LKGL KG+WRQA++V +WVY + +SRFV
Sbjct: 197 SSGDWRLTRMMKQADLIYNEDNLLQILKGLEAKGNWRQAVAVTEWVYNENSYKHRRSRFV 256
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YTKLL+ILGKA P EALRIF +M D +YPD+AAYHS+AVTLG+ GLL EL+K+I+ M
Sbjct: 257 YTKLLSILGKAWMPTEALRIFTIMRGDAQIYPDMAAYHSIAVTLGRAGLLNELIKIIDYM 316
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RQKPSKR+ M RK+WDP+LEPD++VYN+VLNACV S QWKGVFWVF+++R GL P+ A
Sbjct: 317 RQKPSKRVMMMRRKDWDPLLEPDVLVYNSVLNACVLSQQWKGVFWVFQKMRFGGLTPTGA 376
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+GLAMEVML+S KY+ V +FF KM + G A+TYKVLVRAFWE+GK+NEAV AV++M
Sbjct: 377 TFGLAMEVMLKSKKYEFVQKFFEKMQRKGVPPRAITYKVLVRAFWEQGKVNEAVEAVKDM 436
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
EQRGVVG A+VYYELACCLCN GRW+DAML VEK++ R +KPLE FTG+I++S DGG+
Sbjct: 437 EQRGVVGAATVYYELACCLCNKGRWKDAMLQVEKMEQFRLTKPLEFAFTGMILASFDGGY 496
Query: 471 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
I +CISIF+ MKD+C PNIGT+N MLKVY R DMF KAK+LFE TT S + G
Sbjct: 497 ISECISIFESMKDYCTPNIGTINVMLKVYGRCDMFGKAKDLFETTT---CSSQPHIRGHS 553
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ LK D YTYSS+LEASA+A QWEYFE VY+ M LS LDQ+K++WLL++ASRAGK +L
Sbjct: 554 S-LKVDVYTYSSILEASASAQQWEYFENVYRKMTLSQHHLDQSKYSWLLIKASRAGKPYL 612
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
+EHA DS+LE GEIP FTE + Q I +S+Y + + L+N M+ A ++ E+QW++L
Sbjct: 613 VEHALDSILERGEIPDVELFTENICQTIAESDYGRTLHLMNTMSAASVNMNEQQWSDLLL 672
Query: 651 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
N R L+ L+ L +A ++ S RAL + C + +D
Sbjct: 673 QNSHRFRVHGLKDLITHLSTSDAIKTDPGHS-FVRALQSQCATMLAKD 719
>gi|9757878|dbj|BAB08465.1| unnamed protein product [Arabidopsis thaliana]
Length = 505
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/510 (66%), Positives = 407/510 (79%), Gaps = 14/510 (2%)
Query: 80 LVGKPWERIERLKFRQLAS--ESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSD 137
+VG PWE IER+K ++L S +E + LK+ENL+ELK++ EKDL WVLDDDV +
Sbjct: 1 MVGNPWEGIERVKLKELVSGVRREEVSAGELKKENLKELKKILEKDLRWVLDDDVDVEEF 60
Query: 138 YFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLL 197
K E+ P KRWR+E EA+RVLVDRLS RE+ K+WKFVR+MNQSGL FTE QMLK++
Sbjct: 61 DLDK--EFDPAKRWRNEGEAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIV 118
Query: 198 KGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED 257
LG K SW+QA +V+ WVY K ++ L+SRFVYTKLL++LG A RP EAL+IFN ML D
Sbjct: 119 DRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGD 178
Query: 258 CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVY 317
LYPD+AAYH +AVTLGQ GLLKEL+K+IERMRQKP+K KN+ +KNWDPVLEPDLVVY
Sbjct: 179 RQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVY 238
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
NA+LNACVP+ QWK V WVF +LRK+GL+P+ ATYGLAMEVML+SGK+D VH+FFRKM
Sbjct: 239 NAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKS 298
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
SGEA A+TYKVLVRA W EGKI EAV AVR+MEQ+GV+GT SVYYELACCLCNNGRW D
Sbjct: 299 SGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCD 358
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLK 497
AML V ++K L + +PLEITFTGLI +S++GGH+DDC++IFQ+MKD C+PNIGT N MLK
Sbjct: 359 AMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLK 418
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
VY RNDMFS+AKELFEE +S L P+EYTYS MLEASA + QWEYFE
Sbjct: 419 VYGRNDMFSEAKELFEE----------IVSRKETHLVPNEYTYSFMLEASARSLQWEYFE 468
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+VY+ M LSG Q+DQTKHA +L+EASRAGK
Sbjct: 469 HVYQTMVLSGYQMDQTKHASMLIEASRAGK 498
>gi|110738632|dbj|BAF01241.1| hypothetical protein [Arabidopsis thaliana]
Length = 508
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/428 (65%), Positives = 345/428 (80%), Gaps = 11/428 (2%)
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+AAYH +AVTLGQ GLLKEL+K+IERMRQKP+K KN+ +KNWDPVLEPDLVVYNA+LNA
Sbjct: 1 MAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNA 60
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
CVP+ QWK V WVF +LRK+GL+P+ ATYGLAMEVML+SGK+D VH+FFRKM SGEA
Sbjct: 61 CVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPK 120
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
A+TYKVLVRA W EGKI EAV AVR+MEQ+GV+GT SVYYELACCLCNNGRW DAML V
Sbjct: 121 AITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVG 180
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRND 503
++K L + +PLEITFTGLI +S++GGH+DDC++IFQ+MKD C+PNIGT N MLKVY RND
Sbjct: 181 RMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRND 240
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
MFS+AKELFEE +S L P+EYTYS MLEASA + QWEYFE+VY+ M
Sbjct: 241 MFSEAKELFEE----------IVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTM 290
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
LSG Q+DQTKHA +L+EASRAGK LLEHAFD++LE GEIPHPLFFTE+L A + ++
Sbjct: 291 VLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDF 350
Query: 624 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNL 683
++A+ LIN +A A F I+E +WT+LFE ++D +++D L KL + L C+ SE TVSNL
Sbjct: 351 QRAITLINTVALASFQISEEEWTDLFEEHQDWLTQDNLHKLSDHLIECDYV-SEPTVSNL 409
Query: 684 SRALHALC 691
S++L + C
Sbjct: 410 SKSLKSRC 417
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 16/233 (6%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
VR M Q G++ T +L L + G W AM + + L++ R L+ F T L+A
Sbjct: 144 VRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITF--TGLIAA 201
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
G + + IF M + C+ P+I + + G+ + E +L E + +
Sbjct: 202 SLNGGHVDDCMAIFQYMKDKCD--PNIGTANMMLKVYGRNDMFSEAKELFEEIVSR---- 255
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
K H L P+ Y+ +L A S QW+ V++ + SG + + +
Sbjct: 256 -KETH-------LVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLI 307
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
++GK+ L+ F + + GE L + L+ +G A+ + +
Sbjct: 308 EASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTV 360
>gi|414874089|tpg|DAA52646.1| TPA: hypothetical protein ZEAMMB73_282844 [Zea mays]
Length = 659
Score = 577 bits (1487), Expect = e-161, Method: Compositional matrix adjust.
Identities = 307/637 (48%), Positives = 408/637 (64%), Gaps = 69/637 (10%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTL 61
E ++++ L+ GV PTPKIL ++RKKE K R+ A+ + A + S+ EE F+
Sbjct: 38 ETLRRRFLRRGVSPTPKILHTLRKKEALKALRR-ARKDTAAAATASRNPCDEEETRFRAA 96
Query: 62 KREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFE 121
E+ L G+PW+ R + + G+ E LRE+
Sbjct: 97 AAEYHA------------LAGRPWDAGTRG-----MAPPRGLDGEEGGLEGLREMLAARR 139
Query: 122 KD-LNWVLDDDVQLGSDYFAKNVEWHPEKRW----RSEAEAIRVLV-------------- 162
D W+LDDD++ ++ + + P W E I++LV
Sbjct: 140 GDGFRWLLDDDIE--AEAAERKQQRRPGAGWDVGTEDEERRIQLLVSRTSIQLVLESNDP 197
Query: 163 ------DRLSERE-----------------------MTAKNWKFVRIMNQSGLMFTEGQM 193
DR+S E ++ ++W+ R+M ++ ++++E +
Sbjct: 198 TLPQPEDRISGVEKGLAGLQPNCGPPWNKKRLNGDYLSFRDWRLTRVMKRADIIYSEDNL 257
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L++L GL +G+WRQA+S+++WVY R KSRFVYTKLL+ILGK+ R EAL IF +
Sbjct: 258 LRILDGLEARGNWRQALSIIEWVYNENSYRHRKSRFVYTKLLSILGKSLRATEALHIFTI 317
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M D +YPD+ AYH +AVTLG+ GLLKEL+K+IE MRQKPSK + M RK+WDP LEPD
Sbjct: 318 MRGDAQIYPDMPAYHCIAVTLGRAGLLKELIKIIEYMRQKPSKLVMKMRRKDWDPSLEPD 377
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
++VYN+VLNACV S QWKGVFWVF+Q+R GL P+ ATYGLAMEVML++ KYD V +F+
Sbjct: 378 VLVYNSVLNACVLSQQWKGVFWVFQQMRIGGLPPTGATYGLAMEVMLKAKKYDFVQKFYE 437
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
KM K+G A+TYKVLVR+FWE+ KINEAV AV +MEQRGVVG ASVYYELACCLCNNG
Sbjct: 438 KMQKNGVPPRAITYKVLVRSFWEQDKINEAVEAVNDMEQRGVVGAASVYYELACCLCNNG 497
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 493
RW+DAML VEK+K L +KPLE FTG+I++S +GG+I DCISIF+ MKDHC PNIGTVN
Sbjct: 498 RWRDAMLQVEKLKQLPLTKPLEYAFTGMILASFNGGYIYDCISIFELMKDHCMPNIGTVN 557
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
MLKVY DMF KAK+LFE T + T++ + + K D YTY+SMLEASA+A QW
Sbjct: 558 VMLKVYGHCDMFGKAKDLFETTKACFLNSQTYIH-EHSSFKADTYTYNSMLEASASAQQW 616
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
EYFEYVY+ MALS LDQ+K++WLL++A RAGK +
Sbjct: 617 EYFEYVYREMALSHHCLDQSKYSWLLIKACRAGKVRV 653
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 100/252 (39%), Gaps = 14/252 (5%)
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYY------ELACCLCNNGRWQDAMLVVEKI--- 445
W + ++N + R+ V+ A + Y + L G W+ A+ ++E +
Sbjct: 224 WNKKRLNGDYLSFRDWRLTRVMKRADIIYSEDNLLRILDGLEARGNWRQALSIIEWVYNE 283
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRND 503
S RH K +T L+ + + IF M+ + P++ + + R
Sbjct: 284 NSYRHRKS-RFVYTKLLSILGKSLRATEALHIFTIMRGDAQIYPDMPAYHCIAVTLGRAG 342
Query: 504 MFSKAKELFEETTRANSSGYTFLS-GDGAP-LKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+ + ++ E + S + D P L+PD Y+S+L A + QW+ +V++
Sbjct: 343 LLKELIKIIEYMRQKPSKLVMKMRRKDWDPSLEPDVLVYNSVLNACVLSQQWKGVFWVFQ 402
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
M + G + + +A K ++ ++ + + G P + + ++ Q
Sbjct: 403 QMRIGGLPPTGATYGLAMEVMLKAKKYDFVQKFYEKMQKNGVPPRAITYKVLVRSFWEQD 462
Query: 622 NYEKAVALINAM 633
+AV +N M
Sbjct: 463 KINEAVEAVNDM 474
>gi|147858132|emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
Length = 615
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/487 (55%), Positives = 338/487 (69%), Gaps = 33/487 (6%)
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
VLVRAFWEEGK+NEAV VR+ME+RGVVG ASVYYELACCLCNNGRWQDA++ VEK+K
Sbjct: 12 VLVRAFWEEGKVNEAVEVVRDMERRGVVGIASVYYELACCLCNNGRWQDAIVEVEKLKKR 71
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKA 508
HSKPLE+TFTG+I SSMDGGH+DDC+SIF+HMK HC PNIGT+NAMLKVY RNDMFSKA
Sbjct: 72 PHSKPLEVTFTGMITSSMDGGHLDDCLSIFEHMKYHCSPNIGTINAMLKVYGRNDMFSKA 131
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
KELFEET R+ + T + L PD YTYSSMLEASA+AHQWE+FEYVYK M LSG
Sbjct: 132 KELFEETKRSTFASNTCMDDGSISLVPDLYTYSSMLEASASAHQWEFFEYVYKEMTLSGY 191
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
QLDQ+KHA LL +ASRAGK HLLEHAFD++LEAGEIPHP FTEM+ QA Q NYE+AV
Sbjct: 192 QLDQSKHALLLGKASRAGKWHLLEHAFDTILEAGEIPHPSIFTEMICQATAQHNYERAVT 251
Query: 629 LINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALH 688
LINAMA+APF ++E+QWT+LF + +DRISR LEKLL++L NC+ A E TVSNL ++L
Sbjct: 252 LINAMAHAPFVVSEKQWTDLFVT-DDRISRVNLEKLLDSLHNCDVA-EEATVSNLYKSLQ 309
Query: 689 ALCRSEKERDLSSSAHFGSQAIDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADP 748
+LC S D SS A FG +A+ +PL+G D + SA + +P
Sbjct: 310 SLCGSGTSMDQSSVA-FGDEAMIRTPLNGNSGELDDNKKVFFQKFSADARGSDLSPHENP 368
Query: 749 LPQKTDVAVDIDSINHS-SLSRQADADTEMFSKALSYIHSNDR-PSNLCIDMEGLADDWA 806
+ +DV DI S+N + S D D E S+A +Y + D SN ++G
Sbjct: 369 PVKNSDVTFDIFSVNLTRSEEEDDDTDGEAISEAFNYACNGDEVASNEPNTLDG------ 422
Query: 807 SSEHSDYLDKELAALYLSKQSQDNDVVDLQKSMNRVGGSRRSELPSASEILEAWKESREK 866
+S+ ++K + L+ +++++D S S LPSA+EILE WK+SRE+
Sbjct: 423 ---NSEGINK----IELNMRAKEDD-------------SHGSNLPSANEILETWKKSRER 462
Query: 867 D--GIFF 871
D +FF
Sbjct: 463 DVRPLFF 469
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 6/221 (2%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLV E + + VR M + G++ +L L + G W+ A+ ++ +
Sbjct: 12 VLVRAFWEEGKVNEAVEVVRDMERRGVVGIASVYYELACCLCNNGRWQDAIVEVEKLKKR 71
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ L+ F T ++ G + L IF M C+ P+I +++ G+ +
Sbjct: 72 PHSKPLEVTF--TGMITSSMDGGHLDDCLSIFEHMKYHCS--PNIGTINAMLKVYGRNDM 127
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ +L E ++ S N + L PDL Y+++L A +HQW+ +V+K+
Sbjct: 128 FSKAKELFEETKR--STFASNTCMDDGSISLVPDLYTYSSMLEASASAHQWEFFEYVYKE 185
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+ SG + + + L + ++GK+ L+ F + ++GE
Sbjct: 186 MTLSGYQLDQSKHALLLGKASRAGKWHLLEHAFDTILEAGE 226
>gi|62321553|dbj|BAD95068.1| putative protein [Arabidopsis thaliana]
Length = 416
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/336 (63%), Positives = 263/336 (78%), Gaps = 11/336 (3%)
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
MEVML+SGK+D VH+FFRKM SGEA A+TYKVLVRA W EGKI EAV AVR+MEQ+GV
Sbjct: 1 MEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGV 60
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+GT SVYYELACCLCNNGRW DAML V ++K L + +PLEITFTGLI +S++GGH+DDC+
Sbjct: 61 IGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCM 120
Query: 476 SIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+IFQ+MKD C+PNIGT N MLKVY RNDMFS+AKELFEE +S L P
Sbjct: 121 AIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEE----------IVSRKETHLVP 170
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
+EYTYS MLEASA + QWEYFE+VY+ M LSG Q+DQTKHA +L+EASRAGK LLEHAF
Sbjct: 171 NEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAF 230
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 655
D++LE GEIPHPLFFTE+L A + ++++A+ LIN +A A F I+E +WT+LFE ++D
Sbjct: 231 DAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQISEEEWTDLFEEHQDW 290
Query: 656 ISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 691
+++D L KL + L C+ SE TVSNLS++L + C
Sbjct: 291 LTQDNLHKLSDHLIECDYV-SEPTVSNLSKSLKSRC 325
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 16/233 (6%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
VR M Q G++ T +L L + G W AM + + L++ R L+ +T L+A
Sbjct: 52 VRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLE--ITFTGLIAA 109
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
G + + IF M + C+ P+I + + G+ + E +L E + +
Sbjct: 110 SLNGGHVDDCMAIFQYMKDKCD--PNIGTANMMLKVYGRNDMFSEAKELFEEIVSR---- 163
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
K H L P+ Y+ +L A S QW+ V++ + SG + + +
Sbjct: 164 -KETH-------LVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLI 215
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
++GK+ L+ F + + GE L + L+ +G A+ + +
Sbjct: 216 EASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTV 268
>gi|218188830|gb|EEC71257.1| hypothetical protein OsI_03237 [Oryza sativa Indica Group]
Length = 994
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/519 (41%), Positives = 324/519 (62%), Gaps = 7/519 (1%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I+ L RL+ ++ WKF ++++ + + F++ +L++++ LG G+W++ + V++W+
Sbjct: 444 IQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRVVQILGRYGNWKRVLQVVEWLQ 503
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + KSR++YT +L +LGKA RP EAL +F ML+ + YPD+AAYH +AVTLGQ
Sbjct: 504 SRERFKSYKSRYIYTTVLDVLGKAKRPFEALNVFYTMLDQLSSYPDMAAYHCIAVTLGQS 563
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
GL+KEL +I+RMR P K+ K +NWDP LEPDL+VYNAVLNACV QW+G FWV
Sbjct: 564 GLVKELFDVIDRMRS-PPKKFKLSPIQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFWVL 622
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+QL++ ++P+ TYGL MEVML GKY+LV+EFF K+ K+ GAL YKVL+ A W E
Sbjct: 623 QQLKEKNIRPTNTTYGLVMEVMLVCGKYNLVYEFFNKVEKT-SIPGALNYKVLINALWRE 681
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
GKI+EAV AV+ ME RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +T
Sbjct: 682 GKIDEAVMAVKGMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVVT 740
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
+TGLI + +D G +++ IF M +C PN T N MLK Y+ + MF AK+L E
Sbjct: 741 YTGLIQTCIDNGSMENAKYIFDEMCKYCSPNNVTCNIMLKSYTEHGMFEDAKDLLENILS 800
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
S D++T++ +EA A A +W FEY ++ M SG D+ +H
Sbjct: 801 GRIRSKVESSQKAI---ADKFTFNIFMEACAEAKRWNDFEYAFRKMLSSGYHFDERRHLH 857
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
++++A R GK LLE +D + + G +P E + Q + A++ IN +
Sbjct: 858 MVLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESK 917
Query: 638 F-HITERQWTELFESNEDRISRDKLEKLLNALCNCNAAS 675
+++ W L N DR+ D + KLL+ L N ++S
Sbjct: 918 IRNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSS 956
>gi|326522626|dbj|BAK07775.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 969
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/559 (39%), Positives = 338/559 (60%), Gaps = 7/559 (1%)
Query: 111 ENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREM 170
EN+++ K +D V+DD + +V P E I+ L RL+ ++
Sbjct: 374 ENVQQGK-FVRRDSKAVVDDRAAFKTFEAFTDVRNRPRALQMEIEERIQKLASRLNATDV 432
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
WKF ++++ + + FT+ +L++++ LG G+W++ + V++W+ + + KSR++
Sbjct: 433 NTPEWKFSKMIHDAQIKFTDHSILRIVQILGRYGNWKRVLQVVEWLQSRERFKSYKSRYI 492
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT +L +LGKA RP EAL +F MLE + YPDIAAYH +AVTLGQ GL+KEL +I+ M
Sbjct: 493 YTTVLDVLGKAKRPFEALNVFYTMLEQLSSYPDIAAYHCIAVTLGQAGLVKELFDVIDCM 552
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R P K+ +NWDP LEPDL+VYNAVLNACV QW+G FWV +QL++ ++P+
Sbjct: 553 RSPPKKKFMVGPVQNWDPRLEPDLIVYNAVLNACVQQKQWEGTFWVLQQLKEKNIRPTNT 612
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYGL MEVML GKY+LV+EFF ++ K GAL YKVLV A W EGKI+EAV AV++M
Sbjct: 613 TYGLVMEVMLVCGKYNLVYEFFDRV-KQKSIPGALNYKVLVNALWREGKIDEAVMAVKDM 671
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
E RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +T+TGLI +D G
Sbjct: 672 ENRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVVTYTGLIQICIDSGS 730
Query: 471 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
I++ IF+ M ++C PN T N MLK Y + MF AK+L E L
Sbjct: 731 IENAKYIFKEMCNYCSPNNVTCNIMLKSYIDHGMFEDAKDLLENILNGRIRSKADLDQQA 790
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
D++T+++ L+A A A +W FEY ++ M +G D+ +H ++++A R+GK L
Sbjct: 791 I---ADKFTFNTFLDACAEAKKWNEFEYAFRKMLSNGYHFDERRHLRMVLDAYRSGKEQL 847
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF-HITERQWTELF 649
LE +D L G +P E + Q + A++ I++ + +++ + W+ L
Sbjct: 848 LEDIWDYLCRNGRVPPAAMIMERFCLKLRQGHTTAALSCISSFQESKIGNVSSKSWSSLL 907
Query: 650 ESNEDRISRDKLEKLLNAL 668
N D + + + +L++ L
Sbjct: 908 NRNADLLEEESVAELVHKL 926
>gi|357130707|ref|XP_003566988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Brachypodium distachyon]
Length = 976
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/584 (39%), Positives = 349/584 (59%), Gaps = 9/584 (1%)
Query: 109 KRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSER 168
K EN+ +L + +D V+DD + +V P E I+ L +L+
Sbjct: 381 KGENV-QLGKFVRRDSEAVIDDRAAFKTFEVFTDVRNRPRVLQMEIEERIQKLASQLNAT 439
Query: 169 EMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR 228
++ WKF ++++ + + FT+ +L++++ LG G+W++ + V++W+ + + KSR
Sbjct: 440 DVNTPEWKFSKMIHDAQIKFTDHSILRIVQILGRYGNWKRVLQVVEWLQSRERFKSYKSR 499
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++YT +L +LGKA +P EAL +F ML+ + YPDIAAYH +AVTLGQ GL+KEL +I+
Sbjct: 500 YIYTTVLDVLGKAKKPFEALNVFYTMLDQMSSYPDIAAYHCIAVTLGQAGLVKELFDVID 559
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR P K+ +NWDP LEPDL+VYNAVLNACV QW+G FWV +QL++ ++P+
Sbjct: 560 CMRSPPRKKFMAGPVQNWDPRLEPDLIVYNAVLNACVQQKQWEGTFWVLQQLKEKNIRPT 619
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TYGL MEVML GKY+LV+EFF ++ K GAL YKVLV A W EGKI+EAV AV+
Sbjct: 620 NTTYGLVMEVMLVCGKYNLVYEFFDRV-KQKSIPGALNYKVLVNALWREGKIDEAVMAVK 678
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+ME+RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +T+TGLI +D
Sbjct: 679 DMEKRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVVTYTGLIQICIDS 737
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
G +++ IF M +C PN T N MLK Y + MF AK+L E G S
Sbjct: 738 GSMENAKYIFNEMCSYCSPNNVTCNIMLKSYIEHGMFEDAKDLLENILNGR-IGSKLDSS 796
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
A + D++T+++ LEA A A +W FE ++ M +G D+ +H ++++A R GK
Sbjct: 797 QTA--EADKFTFNTFLEACAEAKKWNDFEDAFRKMLSNGYHFDERRHLRMVLDAYRNGKE 854
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF-HITERQWTE 647
LLE+ +D L G +P E + Q + A++ I++ + ++ W
Sbjct: 855 QLLENIWDYLCHHGRVPPVPMIMERFCLKLRQGDTTTALSCISSFQESKIRRVSSMSWFN 914
Query: 648 LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 691
L N DR+ + + KL++ L N ASS T +L + + + C
Sbjct: 915 LLNRNADRLKEESIAKLVHEL--NNYASSGSTCDSLYQNILSSC 956
>gi|222619034|gb|EEE55166.1| hypothetical protein OsJ_02981 [Oryza sativa Japonica Group]
Length = 994
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/519 (41%), Positives = 323/519 (62%), Gaps = 7/519 (1%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I+ L RL+ ++ WKF ++++ + + F++ +L++++ LG G+W++ + V++W+
Sbjct: 444 IQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRVVQILGRYGNWKRVLQVVEWLQ 503
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + KSR++YT +L +LGKA RP EAL +F ML+ + YPD+AAYH +AVTLGQ
Sbjct: 504 SRERFKSYKSRYIYTTVLDVLGKAKRPFEALNVFYTMLDQLSSYPDMAAYHCIAVTLGQS 563
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
GL+KEL +I+RMR P K+ K +NWDP LEPDL+VYNAVLNACV QW+G FWV
Sbjct: 564 GLVKELFDVIDRMRS-PPKKFKLSPIQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFWVL 622
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+QL++ ++P+ TYGL MEVML GKY+LV+EFF K+ K+ G L YKVL+ A W E
Sbjct: 623 QQLKEKNIRPTNTTYGLVMEVMLVCGKYNLVYEFFNKVEKT-SIPGTLNYKVLINALWRE 681
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
GKI+EAV AV+ ME RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +T
Sbjct: 682 GKIDEAVMAVKGMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVVT 740
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
+TGLI + +D G +++ IF M +C PN T N MLK Y+ + MF AK+L E
Sbjct: 741 YTGLIQTCIDNGSMENAKYIFDEMCKYCSPNNITCNIMLKSYTEHGMFEDAKDLLENILS 800
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
S D++T++ +EA A A +W FEY ++ M SG D+ +H
Sbjct: 801 GRIRSKVESSQKAI---ADKFTFNIFMEACAEAKRWNDFEYAFRKMLSSGYHFDERRHLR 857
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
++++A R GK LLE +D + + G +P E + Q + A++ IN +
Sbjct: 858 MVLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESK 917
Query: 638 F-HITERQWTELFESNEDRISRDKLEKLLNALCNCNAAS 675
+++ W L N DR+ D + KLL+ L N ++S
Sbjct: 918 IRNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSS 956
>gi|242053953|ref|XP_002456122.1| hypothetical protein SORBIDRAFT_03g030920 [Sorghum bicolor]
gi|241928097|gb|EES01242.1| hypothetical protein SORBIDRAFT_03g030920 [Sorghum bicolor]
Length = 937
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/522 (40%), Positives = 324/522 (62%), Gaps = 18/522 (3%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L RL+ ++ WKF ++++ + + F++ +L++++ LG G+W+ + V++W
Sbjct: 389 ERIQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRIVQMLGRYGNWKCVLQVVEW 448
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + KSR++YT +L +LGKA RP EAL +F M + YPD+AAYH +AVTLG
Sbjct: 449 LQSRERFKSYKSRYIYTTVLDVLGKAKRPLEALNVFYSMQNQLSSYPDMAAYHCIAVTLG 508
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q GL+KEL +I+ MR P K+ K +NWDP LEPDL+VYNAVLNACV QW+G FW
Sbjct: 509 QAGLVKELFDVIDCMRSPPRKKFKLSPLQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFW 568
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V +QL++ ++P+ +TYGL MEVML GKY+LV+EFF K+ KS GAL YKVLV A W
Sbjct: 569 VLQQLKEKNIRPTNSTYGLVMEVMLVCGKYNLVYEFFNKVEKS-SIPGALNYKVLVNALW 627
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
EGKINEAV AV++ME RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL
Sbjct: 628 REGKINEAVMAVKDMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLV 686
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+T+TGLI + +D G +++ IF HM ++C PN T N MLK Y ++ M AK+L +
Sbjct: 687 VTYTGLIQTCIDNGGMENAKYIFNHMCNYCSPNTVTCNIMLKSYIQHGMLEDAKDLLYDI 746
Query: 516 ------TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
++A+SS D++T+++ LEA A A +W FEY ++ M L+G
Sbjct: 747 LNCRIRSKADSSQVA---------TADKFTFNTFLEACAAAKRWNDFEYAFRQMLLNGYH 797
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
D+ +H ++++A R GK LL+ + L +P E ++Q + A++
Sbjct: 798 FDERRHLRMVLDAYRHGKDQLLDDLWHYLCHHSRVPPTPVIMERFCLKLMQGDTLAAISC 857
Query: 630 INAMAYAPF-HITERQWTELFESNEDRISRDKLEKLLNALCN 670
+++ +I+ W L N R+ + + KL + L N
Sbjct: 858 VSSFKEGKICNISSTSWLNLLNRNTARLKEEHVTKLAHELNN 899
>gi|413950899|gb|AFW83548.1| hypothetical protein ZEAMMB73_840071 [Zea mays]
Length = 956
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/516 (40%), Positives = 320/516 (62%), Gaps = 18/516 (3%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L RL+ ++ WKF ++++ + + F++ +L++++ LG G+W+ + V++W
Sbjct: 406 ERIQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRIVQMLGRYGNWKCVLQVVEW 465
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + KSR++YT +L +LGKA RP EAL +F M + YPD+AAYH +AVTLG
Sbjct: 466 LQSHERFKSYKSRYIYTTVLDVLGKAKRPFEALNVFYTMQNQLSSYPDMAAYHCIAVTLG 525
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q GL+KEL +I+ M P K+ K +NWDP LEPDL+VYNAVLNACV QW+G FW
Sbjct: 526 QAGLIKELFDVIDCMCSPPRKKFKLSPLQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFW 585
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V +QL++ + P+ +TYGL MEVML GKY+LV+EFF K+ KS GAL YKVLV A W
Sbjct: 586 VLQQLKEKNICPTNSTYGLVMEVMLVCGKYNLVYEFFNKVDKS-SIPGALNYKVLVNALW 644
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
EGKI+EAV AV++ME RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL
Sbjct: 645 REGKIDEAVMAVKDMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLV 703
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+T+TGLI + +D G ++D IF HM ++C PN T N M+K Y ++ M AK+L +
Sbjct: 704 VTYTGLIQTCIDNGGMEDAKYIFNHMCNYCSPNSVTCNIMMKSYIKHGMLEDAKDLLHDI 763
Query: 516 ------TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
++A+S+ D++T+++ +EA A A +W FEY ++ M L+G
Sbjct: 764 LNCRIRSKADSNQVA---------TADKFTFNTFMEACAAAKRWNDFEYAFREMLLNGYH 814
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
D+ +H ++++A R GK LL+ + L +P E ++Q + A++
Sbjct: 815 FDERRHLRMVLDAFRHGKEQLLDDLWHYLCRHSRVPPSPVIMERFCLKLMQGDTLAAISC 874
Query: 630 INAMAYAPF-HITERQWTELFESNEDRISRDKLEKL 664
+++ +++ W L N DR+ + + KL
Sbjct: 875 VSSFHEGKICNVSSMSWLNLLSRNADRLKEEHVTKL 910
>gi|56201925|dbj|BAD73375.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|56202015|dbj|BAD73522.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 988
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/519 (41%), Positives = 319/519 (61%), Gaps = 13/519 (2%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I+ L RL+ ++ WKF ++++ + + F++ +L++++ LG G+W++ + V++W+
Sbjct: 444 IQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRVVQILGRYGNWKRVLQVVEWLQ 503
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + KSR++YT +L +LGKA RP EAL + + YPD+AAYH +AVTLGQ
Sbjct: 504 SRERFKSYKSRYIYTTVLDVLGKAKRPFEALN------DQLSSYPDMAAYHCIAVTLGQS 557
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
GL+KEL +I+RMR P K+ K +NWDP LEPDL+VYNAVLNACV QW+G FWV
Sbjct: 558 GLVKELFDVIDRMRS-PPKKFKLSPIQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFWVL 616
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+QL++ ++P+ TYGL MEVML GKY+LV+EFF K+ K+ G L YKVL+ A W E
Sbjct: 617 QQLKEKNIRPTNTTYGLVMEVMLVCGKYNLVYEFFNKVEKT-SIPGTLNYKVLINALWRE 675
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
GKI+EAV AV+ ME RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +T
Sbjct: 676 GKIDEAVMAVKGMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVVT 734
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
+TGLI + +D G +++ IF M +C PN T N MLK Y+ + MF AK+L E
Sbjct: 735 YTGLIQTCIDNGSMENAKYIFDEMCKYCSPNNITCNIMLKSYTEHGMFEDAKDLLENILS 794
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
S D++T++ +EA A A +W FEY ++ M SG D+ +H
Sbjct: 795 GRIRSKVESSQKAI---ADKFTFNIFMEACAEAKRWNDFEYAFRKMLSSGYHFDERRHLR 851
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
++++A R GK LLE +D + + G +P E + Q + A++ IN +
Sbjct: 852 MVLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESK 911
Query: 638 F-HITERQWTELFESNEDRISRDKLEKLLNALCNCNAAS 675
+++ W L N DR+ D + KLL+ L N ++S
Sbjct: 912 IRNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSS 950
>gi|147858133|emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]
Length = 490
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/362 (58%), Positives = 275/362 (75%), Gaps = 18/362 (4%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTL 61
EKIK+ L++ GV+PTPKI+ ++RKKEIQK RK ++ +Q Q SP++ + + EE HF+TL
Sbjct: 15 EKIKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQ-SPTEDEEVNEEAHFRTL 73
Query: 62 KREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFE 121
KRE+ +A+ +VGKPWER F+++ + S E+ G+ LKRE+LREL E+ E
Sbjct: 74 KREYTKLSKAL-------MVGKPWERP---GFKEILNGSVEYGGERLKREHLRELSEILE 123
Query: 122 K--DLNWVLDDDVQL--GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKF 177
K ++ W+LDDDV++ GS + W P +R +A+AIR LVDRL+ ++T ++WKF
Sbjct: 124 KRGEVRWLLDDDVEVEQGSSGNERR-GWSPARRRGGDADAIRFLVDRLTAADITIRDWKF 182
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDK--RDLKSRFVYTKLL 235
R+M QSGL FTE Q+L++++ LG +G W+ A+SV++WVY KDK R KSRFVYTKLL
Sbjct: 183 SRVMKQSGLQFTERQLLRIVEELGARGHWKHALSVVEWVYTDKDKDNRRYKSRFVYTKLL 242
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
A+LGKA RPHEAL IFNLM DC++YPD+AAYHSVAVTLGQ GLLKEL+ +IE MRQKP
Sbjct: 243 AVLGKAKRPHEALDIFNLMRGDCHIYPDMAAYHSVAVTLGQAGLLKELLNIIECMRQKPP 302
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
KRIKNM RKNW+ +LEPD+V++NAVLNACVP+ QWKGV WVFKQLRK LKP+ ATYGLA
Sbjct: 303 KRIKNMCRKNWNALLEPDVVIFNAVLNACVPTQQWKGVSWVFKQLRKCSLKPNGATYGLA 362
Query: 356 ME 357
ME
Sbjct: 363 ME 364
>gi|449435940|ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Cucumis sativus]
Length = 902
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/541 (39%), Positives = 327/541 (60%), Gaps = 8/541 (1%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I++L RL+ ++ W F ++M + + +++ +L++++ LG G+WR+ + +++W
Sbjct: 353 ERIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEW 412
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + K RF+YT L +LGKA RP EAL +F+ M E + YPD+ AYHS+AVTLG
Sbjct: 413 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG 472
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q G ++EL +I+ MR P K+ K + WDP L+PD+V+YNAVLNACV +G FW
Sbjct: 473 QAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 532
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V ++L+K L+PS +TYGL MEVML+ GKY+LVHEFFRK+ KS ALTYKVLV W
Sbjct: 533 VLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSS-IPNALTYKVLVNTLW 591
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+EGK +EAV A+ NME RG+VG+A++YY+ A CLC+ GR ++A++ +EKI + +KPL
Sbjct: 592 KEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKV-ANKPLV 650
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+T+TGLI + +D + + IF HMK C PN+ T N +LK Y + MF +A+ELF+
Sbjct: 651 VTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNL 710
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+ + T +S + PD Y +++ML+AS +W+ F Y Y M L G + +H
Sbjct: 711 SEQRRNIST-VSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRH 769
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI-NAMA 634
+++EA+R GK LLE + L +A P P E + + +Y +A++ I + +
Sbjct: 770 LRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNS 829
Query: 635 YAPFHITERQWTELFESNEDRISRDKLEKLLN--ALCNCNAASSEITVSNLSRALHALCR 692
H +E W L + E R RD + +L++ + S NL + CR
Sbjct: 830 GDAHHFSESAWLNLLK--EKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCR 887
Query: 693 S 693
+
Sbjct: 888 T 888
>gi|255586263|ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526285|gb|EEF28597.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 856
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 251/688 (36%), Positives = 385/688 (55%), Gaps = 45/688 (6%)
Query: 41 QAQLSPSQQQALAEEQHF-QTLKREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASE 99
++Q + +++ A Q+F + L+R+ K SG+ + G R+ R + +
Sbjct: 187 RSQSTTGKKEEFAYGQNFPEMLRRKGKTHIGEEDGVSGNKMGG----RLVRNYVQIDKNT 242
Query: 100 SKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSDYFA-----KNVEWHPEKRWRSE 154
KEF K+ +R + F L++ +DD ++ F N P+ R
Sbjct: 243 DKEFME---KKGLIRRTNQAF---LDYGHEDDSEVERAAFKSLEEYNNFTGRPQNSKREV 296
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
+ ++ L L+ ++ W F ++M + + +T+ +L++++ LG G+WR+ + V++
Sbjct: 297 EDRLQKLAKCLNGADIDMPEWMFSKMMRSARIKYTDHSVLRIIQILGKLGNWRRVLQVIE 356
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
W+ + + + R +YT L +LGKA RP EAL +F++M + + YPD+ AYH +AVTL
Sbjct: 357 WLQMRERFKSHRLRNIYTTALNVLGKAQRPVEALNVFHVMQQQMSSYPDLVAYHCIAVTL 416
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
GQ G +++L +I+ MR P K+ K WDP LEPD+VVYNAVLNACV QW+G F
Sbjct: 417 GQAGHMEQLFDVIDSMRSPPKKKFKMAAVHKWDPRLEPDIVVYNAVLNACVQRKQWEGAF 476
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
WV +QL++ GL+PS TYGL MEVM GKY+LVHEFFRK+ KS AL YKVLV
Sbjct: 477 WVLQQLKQQGLQPSTTTYGLIMEVMFACGKYNLVHEFFRKVQKSS-IPNALVYKVLVNTL 535
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
W EGK +EAV AV ME+RG+VG A++YY+LA CLC+ GR Q+A+L +EKI + +KPL
Sbjct: 536 WREGKTDEAVLAVEEMERRGIVGFAALYYDLARCLCSAGRCQEALLQIEKICRV-ANKPL 594
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+TGLI + +D G+I + + IF MK C PN+ T N MLK Y + +F AKELF +
Sbjct: 595 VVTYTGLIQACLDSGNIHNAVYIFNQMKHFCSPNLVTFNVMLKAYFEHGLFEDAKELFHK 654
Query: 515 TTRANSSGYTFLSGD---GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
T ++ + G+ + PD YT+++ML+A + W+ FEYVY+ M G +
Sbjct: 655 MTEDSNH----IRGNHDYKVRVIPDIYTFNTMLDACISEKSWDDFEYVYRRMLHHGFHFN 710
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI- 630
+H ++++ASRAGK LE + L A IP P E + + + + A+A I
Sbjct: 711 GKRHLRMILDASRAGKVEPLEMTWKHLARADRIPPPNLIKERFRIMLEKDDCKSALACIT 770
Query: 631 -NAMAYAP-FHITERQWTELFESNEDRISRDKLEK---------------LLNALCNCNA 673
N M +P FH + W LF+ N ++I RD L + L N L +CN
Sbjct: 771 TNPMGESPAFH--KVAWLNLFKENAEQIRRDTLIQLKHEVSMLVNPPDPVLQNLLASCND 828
Query: 674 ASSEITVSNLSRALHALCRSEKERDLSS 701
+ + + S +C +E + +L S
Sbjct: 829 FLNSQVIVSESSLPEIVCTAESQTNLKS 856
>gi|356541058|ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Glycine max]
Length = 893
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/528 (40%), Positives = 321/528 (60%), Gaps = 16/528 (3%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L + L+ ++ W F +++ + L F + + +++ LG G+WR+ + V++W
Sbjct: 343 EKIQKLANSLNGADINLPEWMFSKMIRSARLKFNDYAITRIIIILGKLGNWRRVIQVIEW 402
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + K R +YT L LGK+ RP EAL IF+ M + + YPD+ AYHS+AVTLG
Sbjct: 403 LQKRERFKSHKLRHIYTAALDALGKSRRPVEALNIFHAMQQQMSSYPDLVAYHSIAVTLG 462
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q G +KEL +I+ MR P K+ K +NWDP LEPD+VVY+AVLNACV QW+G FW
Sbjct: 463 QAGHMKELFDVIDIMRSPPKKKFKTGIFENWDPRLEPDIVVYHAVLNACVRRKQWEGAFW 522
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V +QL+K G PSA TYGL MEVML GKY+LVHEFFRK+ KS +LTY+VLV W
Sbjct: 523 VLQQLKKQGQPPSATTYGLVMEVMLSCGKYNLVHEFFRKLQKSFSP-NSLTYRVLVNTLW 581
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+EGK +EA+ AV+ ME+RG+VG+AS+YY+LA CL GR +A+ ++KI + +KPL
Sbjct: 582 QEGKPDEAILAVQEMERRGIVGSASLYYDLARCLSAAGRSHEALKQIDKICKV-ANKPLV 640
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+T+TGL+ +S+D G+I D IF+ MK+ C PN+ T N +LK Y + MF +AK LFE+
Sbjct: 641 VTYTGLMQASLDAGNIQDGAYIFEKMKEICAPNLVTCNIILKAYLEHGMFQEAKVLFEQM 700
Query: 516 T------RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+ R N+ Y L + PD Y++++ML+A +W+YF++VY+ M G
Sbjct: 701 SENANRLRGNTD-YKML------VVPDTYSFNTMLDACVAEKRWDYFDHVYQRMLYHGYH 753
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA- 628
+ +H +++EAS+AGK LE + L + IP E + + +Y A+
Sbjct: 754 FNPKRHLRMILEASKAGKERPLEITWKHLTDTDRIPPAPLIKERFCAKLEKDDYVAALTC 813
Query: 629 LINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASS 676
+IN ++ W +LF+ N R +D + L+N N + +S
Sbjct: 814 IINNPPKDLQPFSKSSWLKLFKENSQRFQKDTIVGLMNEASNIVSNNS 861
>gi|225444167|ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Vitis vinifera]
Length = 846
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 314/515 (60%), Gaps = 10/515 (1%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L L+ ++ W F ++M + + FT+ +L++++ LG G+WR+A+ VL+W
Sbjct: 281 ERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRVIQILGKLGNWRRALQVLEW 340
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + K R++YT L +LGKA RP EAL +F ML+ + YPD+ AYH +AVTLG
Sbjct: 341 LQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQQMSSYPDLVAYHCIAVTLG 400
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q G +KEL +I+ MR P K+ K + WDP LEPD+VVYNAVLNACV QW+G FW
Sbjct: 401 QAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVVYNAVLNACVRRKQWEGAFW 460
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V +QL++ KPS TYGL MEVM GKY+LVHEFF K+ KS ALTYKVLV W
Sbjct: 461 VLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQKS-SIPNALTYKVLVNTLW 519
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
EGK +EAV AV++ME+RGVVG+A++YY+LA CLC+ GR Q+A++ +EKI + +KPL
Sbjct: 520 REGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQEALMQIEKICKV-ANKPLV 578
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+T+TGLI +D G+I + IF M + C PN+ T N MLK Y + MF +AK LF +
Sbjct: 579 VTYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFGKM 638
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+ + + S + PD YT+++M++A +W EYVY+ M G + +H
Sbjct: 639 L-GDGNHISSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYVYERMLRHGFHFNAKRH 697
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
++++ASRAGK LLE + SL G +P PL E + + + AV+ I
Sbjct: 698 LRIILDASRAGKEELLETTWKSLAGEGRVPPPL-IKERFCMKLEKGDCAAAVSSITGHHM 756
Query: 636 ----APFHITERQWTELFESNEDRISRDKLEKLLN 666
PF ++R W LF N R + L +L++
Sbjct: 757 NELQEPF--SKRAWLNLFTENAGRFQTESLVELMH 789
>gi|297740901|emb|CBI31083.3| unnamed protein product [Vitis vinifera]
Length = 647
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 314/515 (60%), Gaps = 10/515 (1%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L L+ ++ W F ++M + + FT+ +L++++ LG G+WR+A+ VL+W
Sbjct: 5 ERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRVIQILGKLGNWRRALQVLEW 64
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + K R++YT L +LGKA RP EAL +F ML+ + YPD+ AYH +AVTLG
Sbjct: 65 LQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQQMSSYPDLVAYHCIAVTLG 124
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q G +KEL +I+ MR P K+ K + WDP LEPD+VVYNAVLNACV QW+G FW
Sbjct: 125 QAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVVYNAVLNACVRRKQWEGAFW 184
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V +QL++ KPS TYGL MEVM GKY+LVHEFF K+ KS ALTYKVLV W
Sbjct: 185 VLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQKSSIP-NALTYKVLVNTLW 243
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
EGK +EAV AV++ME+RGVVG+A++YY+LA CLC+ GR Q+A++ +EKI + +KPL
Sbjct: 244 REGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQEALMQIEKICKVA-NKPLV 302
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+T+TGLI +D G+I + IF M + C PN+ T N MLK Y + MF +AK LF +
Sbjct: 303 VTYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFGKM 362
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+ + + S + PD YT+++M++A +W EYVY+ M G + +H
Sbjct: 363 L-GDGNHISSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYVYERMLRHGFHFNAKRH 421
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
++++ASRAGK LLE + SL G +P PL E + + + AV+ I
Sbjct: 422 LRIILDASRAGKEELLETTWKSLAGEGRVPPPL-IKERFCMKLEKGDCAAAVSSITGHHM 480
Query: 636 ----APFHITERQWTELFESNEDRISRDKLEKLLN 666
PF ++R W LF N R + L +L++
Sbjct: 481 NELQEPF--SKRAWLNLFTENAGRFQTESLVELMH 513
>gi|224061585|ref|XP_002300553.1| predicted protein [Populus trichocarpa]
gi|222847811|gb|EEE85358.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 323/546 (59%), Gaps = 40/546 (7%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
W+ E E I+ L + L+ ++ W F + M + + +T+ +L++++ LG G+WR+ +
Sbjct: 68 WKIE-EKIQKLGNWLNGADIDMPEWMFSKAMRSARVKYTDHSVLRIIQILGKLGNWRRVL 126
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+++W+ + + + VYT L +LGKA RP EAL +F+ M ++ LYPD+ AY S+
Sbjct: 127 QIIEWLNIRERYKSHRLSHVYTTALHVLGKAKRPVEALNLFHAMQQEMCLYPDLVAYRSI 186
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
AVTLGQ G +KEL +I+ MR P K+ K+ D LEPDLVVYNAVLNACV QW
Sbjct: 187 AVTLGQAGYMKELFDVIDSMRS-PPKKFKSGAPGKRDLGLEPDLVVYNAVLNACVRRKQW 245
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+G FWV +Q+++ G++PS ATYGL MEVML GKY+LVHEFF+K+ KS AL YKVL
Sbjct: 246 EGAFWVLQQMKEKGVQPSTATYGLVMEVMLACGKYNLVHEFFKKVQKSSIP-NALVYKVL 304
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV-------- 442
V FW EGK EAV AV++ME+RG+VG+A++YY+LA CLC +GR Q+A+ +V
Sbjct: 305 VNTFWREGKTEEAVLAVKDMERRGIVGSAALYYDLARCLCTSGRCQEALDLVIILCLIYY 364
Query: 443 ----------------EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 486
EKI + +KPL +T+TGL+ + +D G+I + + IF M++ C
Sbjct: 365 VSVVHVYLKLNLKNTIEKICKV-ANKPLVVTYTGLVQACLDSGNIQNAVYIFNQMRNFCP 423
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTR-----ANSSGYTFLSGDGAPLKPDEYTYS 541
PN+ T N MLK Y + +F +A ELF + + S Y F + PD YT++
Sbjct: 424 PNLVTCNIMLKAYLEHGLFEEANELFNKMLDDGNHISRRSDYKF------RVIPDIYTFN 477
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
+ML+AS ++W+ FEYVY+ M G + +H ++++ASRAGK +LE + L +
Sbjct: 478 TMLDASIAENKWDDFEYVYQKMLRHGFHFNANRHLRMVLDASRAGKGEVLEITWKHLAQE 537
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH-ITERQWTELFESNEDRISRDK 660
IP P E + + +++ A+A I + + W LFE N R +D
Sbjct: 538 DRIPPPPLVKERFCMMLEKEDFDSALACITTNSAGESQAFCKSAWLNLFEENAQRFRKDT 597
Query: 661 LEKLLN 666
L +L++
Sbjct: 598 LMRLMH 603
>gi|334182963|ref|NP_001185117.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332193129|gb|AEE31250.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 978
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/476 (40%), Positives = 293/476 (61%), Gaps = 13/476 (2%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I L L+ ++ W+F + + + + +T+ +++L+ LG G+WR+ + V++W+
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ K R +YT L +LGK+ RP EAL +F+ ML + YPD+ AY S+AVTLGQ
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G +KEL +I+ MR P K+ K + WDP LEPD+VVYNAVLNACV QW+G FWV
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+QL++ G KPS TYGL MEVML KY+LVHEFFRKM KS AL Y+VLV W+E
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSS-IPNALAYRVLVNTLWKE 675
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
GK +EAV V +ME RG+VG+A++YY+LA CLC+ GR + + +++KI + +KPL +T
Sbjct: 676 GKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRV-ANKPLVVT 734
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
+TGLI + +D G+I + IF MK C PN+ T N MLK Y + +F +A+ELF++ +
Sbjct: 735 YTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSE 794
Query: 518 -----ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
NSS + + + PD YT+++ML+ A +W+ F Y Y+ M G +
Sbjct: 795 DGNHIKNSSDFE------SRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNA 848
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
+H +++EASRAGK ++E ++ + + IP E + + + ++ A++
Sbjct: 849 KRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAIS 904
>gi|297846000|ref|XP_002890881.1| EMB2279 [Arabidopsis lyrata subsp. lyrata]
gi|297336723|gb|EFH67140.1| EMB2279 [Arabidopsis lyrata subsp. lyrata]
Length = 913
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/481 (39%), Positives = 293/481 (60%), Gaps = 13/481 (2%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I L L+ ++ W+F + + + + +T+ +++L+ LG G+WR+ + V++W+
Sbjct: 360 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 419
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ K R +YT L +LGK+ RP EAL +F+ ML + YPD+ AY S+AVTLGQ
Sbjct: 420 RQDRYKSNKLRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 479
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G +KEL +I+ MR P K+ K + WDP LEPD+VVYNAVLNACV QW+G FWV
Sbjct: 480 GHIKELFHVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 539
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+QL++ G KPS TYGL MEVML KY+LVHEFFRKM KS AL Y+VLV W+E
Sbjct: 540 QQLKQRGQKPSPVTYGLVMEVMLACEKYNLVHEFFRKMQKSS-IPNALAYRVLVNTLWKE 598
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-------- 449
GK +EA+ V +ME RG+VG+A++YY+LA CLC+ GR +A+ + + +++
Sbjct: 599 GKSDEAIHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEALNMADLDHTIQCQLNKICR 658
Query: 450 -HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKA 508
+KPL +T+TGLI + +D G+I + IF HMK C PN+ T N M+K Y + F +A
Sbjct: 659 VANKPLVVTYTGLIQACLDSGNIKNAAYIFDHMKKVCSPNLVTCNIMIKAYLQGGFFEEA 718
Query: 509 KELFEETTRANSSGYTFLSGD-GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+ELF++ + + +S D + + PD YT+++ML+ A +W+ F Y Y+ M G
Sbjct: 719 RELFQKMS--EDGNHIKISSDFESRVLPDMYTFNTMLDVCAEQKKWDDFGYAYREMLHHG 776
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
+ +H +++EASRAGK ++E ++ + + IP E + + + ++ A+
Sbjct: 777 YHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAI 836
Query: 628 A 628
+
Sbjct: 837 S 837
>gi|15221459|ref|NP_174349.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200328|sp|Q9SA76.1|PPR64_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g30610, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2279; Flags: Precursor
gi|4587517|gb|AAD25748.1|AC007060_6 T5I8.6 [Arabidopsis thaliana]
gi|332193128|gb|AEE31249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1006
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 296/503 (58%), Gaps = 39/503 (7%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I L L+ ++ W+F + + + + +T+ +++L+ LG G+WR+ + V++W+
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ K R +YT L +LGK+ RP EAL +F+ ML + YPD+ AY S+AVTLGQ
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G +KEL +I+ MR P K+ K + WDP LEPD+VVYNAVLNACV QW+G FWV
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+QL++ G KPS TYGL MEVML KY+LVHEFFRKM KS AL Y+VLV W+E
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSS-IPNALAYRVLVNTLWKE 675
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM--------LVVEKIKSLR 449
GK +EAV V +ME RG+VG+A++YY+LA CLC+ GR + + +V++ I++L
Sbjct: 676 GKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLI 735
Query: 450 H-------------------SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIG 490
+ +KPL +T+TGLI + +D G+I + IF MK C PN+
Sbjct: 736 YKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLV 795
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTR-----ANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
T N MLK Y + +F +A+ELF++ + NSS + + + PD YT+++ML+
Sbjct: 796 TCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFE------SRVLPDTYTFNTMLD 849
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
A +W+ F Y Y+ M G + +H +++EASRAGK ++E ++ + + IP
Sbjct: 850 TCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIP 909
Query: 606 HPLFFTEMLIQAIVQSNYEKAVA 628
E + + + ++ A++
Sbjct: 910 PSPLIKERFFRKLEKGDHISAIS 932
>gi|449530674|ref|XP_004172319.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like, partial [Cucumis sativus]
Length = 477
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/468 (41%), Positives = 284/468 (60%), Gaps = 8/468 (1%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F+YT L +LGKA RP EAL +F+ M E + YPD+ AYHS+AVTLGQ G ++EL +I+
Sbjct: 1 FIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVID 60
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR P K+ K + WDP L+PD+V+YNAVLNACV +G FWV ++L+K L+PS
Sbjct: 61 SMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPS 120
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+TYGL MEVML+ GKY+LVHEFFRK+ KS ALTYKVLV W+EGK +EAV A+
Sbjct: 121 TSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIP-NALTYKVLVNTLWKEGKTDEAVLAIE 179
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
NME RG+VG+A++YY+ A CLC+ GR ++A++ +EKI + +KPL +T+TGLI + +D
Sbjct: 180 NMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVA-NKPLVVTYTGLIQACLDS 238
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ + IF HMK C PN+ T N +LK Y + MF +A+ELF+ + + T +S
Sbjct: 239 KDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNIST-VSD 297
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ PD Y +++ML+AS +W+ F Y Y M L G + +H +++EA+R GK
Sbjct: 298 YRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKD 357
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI-NAMAYAPFHITERQWTE 647
LLE + L +A P P E + + +Y +A++ I + + H +E W
Sbjct: 358 ELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSESAWLN 417
Query: 648 LFESNEDRISRDKLEKLLN--ALCNCNAASSEITVSNLSRALHALCRS 693
L + E R RD + +L++ + S NL + CR+
Sbjct: 418 LLK--EKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRT 463
>gi|168058150|ref|XP_001781073.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667470|gb|EDQ54099.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 413
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 180/412 (43%), Positives = 259/412 (62%), Gaps = 3/412 (0%)
Query: 179 RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAIL 238
R+M+ + L +T+ ++L+L+K LG WR+AM V++WV+ + ++R V T LLA+L
Sbjct: 1 RLMHSARLKWTDSRLLELVKMLGACREWRRAMEVVNWVHHREHFAHCRNRHVMTTLLAVL 60
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR- 297
GK RP EAL +FN M E+ + YPD+AAYHS+AVTLGQ G L +L+ LIE +R+ P K+
Sbjct: 61 GKCHRPAEALDVFNAMREEHSTYPDMAAYHSIAVTLGQAGHLTQLLDLIESLREGPVKKT 120
Query: 298 IKNMHRK-NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+K R+ NW+ LEPD+VVYNAV+NACVP QW+G WVF+Q++ S +KP++ATYGLA
Sbjct: 121 VKGSPRQLNWNGRLEPDIVVYNAVINACVPHRQWEGTEWVFRQIQSSRIKPNSATYGLAT 180
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
EVM++S +YD V ++ M + A T+K LV A G+I++A+ V +ME+RG++
Sbjct: 181 EVMVKSRQYDKVWRYYELMERGDFLPNASTFKALVEALGTAGEIDQAIEVVDDMERRGIL 240
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
A VYY LA LC GR +A++ VEK+ L K +T+TGLI + G D I
Sbjct: 241 ECAGVYYALASALCTAGRLSEALVQVEKLAKLPTKKLDVVTYTGLIHTCEKSGRWQDAIF 300
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+F HM+ C PN+GT N M+ +Y R+ +F KAK +FE R F + + L P
Sbjct: 301 LFDHMEQFVCAPNLGTYNIMISLYGRHCLFEKAKNMFELVKRGAHKESKFYQANLSRLSP 360
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
E TY SML A +W+YFE V + G L+ +HAW L ++AG+
Sbjct: 361 TEQTYESMLGACVVCKEWDYFEVVLEEFHTRGFHLECRRHAWFLSPLTKAGQ 412
>gi|168011414|ref|XP_001758398.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690433|gb|EDQ76800.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 250/420 (59%), Gaps = 3/420 (0%)
Query: 179 RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAIL 238
R+M+ S + +T G +++L+K LG WR+AM V+ WV+ + +SR+VYT LLA+L
Sbjct: 1 RLMHGSRVKWTNGHLIELVKMLGVHNDWRKAMEVVHWVHCREHFGHCRSRYVYTTLLAVL 60
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP-SKR 297
GK RP EAL +FN+M ED + YPDIAAYHS+AVTLG+ G L +L+ LIE +RQ+ KR
Sbjct: 61 GKCLRPVEALNVFNVMREDHSTYPDIAAYHSIAVTLGKAGHLTQLLHLIESLRQESMKKR 120
Query: 298 IKNMHRK-NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+ + + +W LEPD+V+YNAV+NAC P +W+G W +Q++ S + P + TY LA+
Sbjct: 121 ARGIPLQLSWKGSLEPDIVIYNAVINACGPHREWEGAEWALQQIKFSRITPDSITYDLAI 180
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
EVM++SG+YD +++ M + G T+K LV A G+++ A+ V +ME RGV
Sbjct: 181 EVMVKSGQYDKAWKYYELMEREGFLPSGKTFKALVEALGTTGEVDRAMEMVEDMESRGVS 240
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
A VYY LA LC GR +A++ V K+ + KP ITFT LI + G D I+
Sbjct: 241 ECAGVYYALASALCTAGRLSEALVQVAKLANHPSKKPDVITFTCLIQTCEKAGRWQDAIT 300
Query: 477 IFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
+F M+ C PN+GT N M+ +Y R MF +A+ +FE D + L P
Sbjct: 301 LFNRMQYVCSPNVGTYNTMIALYGRLRMFEEARNMFEFVKEGKGIDSRSTPAD-SRLSPT 359
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
+TY SML A A W+YFE V + SG QLD+ +H W + +AG+ L FD
Sbjct: 360 AHTYESMLGACAACEHWDYFEVVLQEYRTSGFQLDRRRHLWFMSPIVKAGQVCLPAFYFD 419
>gi|296088227|emb|CBI35741.3| unnamed protein product [Vitis vinifera]
Length = 437
Score = 328 bits (841), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 196/389 (50%), Positives = 251/389 (64%), Gaps = 31/389 (7%)
Query: 481 MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
MK HC PNIGT+NAMLKVY RNDMFSKAKELFEET R+ + T + L PD YTY
Sbjct: 1 MKYHCSPNIGTINAMLKVYGRNDMFSKAKELFEETKRSTFASNTCMDDGSISLVPDLYTY 60
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
SSMLEASA+AHQWE+FEYVYK M LSG QLDQ+KHA LL +ASRAGK HLLEHAFD++LE
Sbjct: 61 SSMLEASASAHQWEFFEYVYKEMTLSGYQLDQSKHALLLGKASRAGKWHLLEHAFDTILE 120
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDK 660
AGEIPHP FTEM+ QA Q NYE+AV LINAMA+APF ++E+QWT+LF + +DRISR
Sbjct: 121 AGEIPHPSIFTEMICQATAQHNYERAVTLINAMAHAPFVVSEKQWTDLFVT-DDRISRVN 179
Query: 661 LEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHE 720
LEKLL++L NC+ A E TVSNL ++L +LC S D SS A FG +A+ +PL+G
Sbjct: 180 LEKLLDSLHNCDVA-EEATVSNLYKSLQSLCGSGTSMDQSSVA-FGDEAMIRTPLNGNSG 237
Query: 721 AFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHS-SLSRQADADTEMFS 779
D + SA + +P + +DV DI S+N + S D D E S
Sbjct: 238 ELDDNKKVFFQKFSADARGSDLSPHENPPVKNSDVTFDIFSVNLTRSEEEDDDTDGETIS 297
Query: 780 KALSYIHSNDR-PSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQDNDVVDLQKS 838
+A +Y + D SN ++G +S+ ++K + L+ +++++D
Sbjct: 298 EAFNYACNGDEVASNEPNTLDG---------NSEGINK----IELNMRAKEDD------- 337
Query: 839 MNRVGGSRRSELPSASEILEAWKESREKD 867
S S LPSA+EILE WK+SRE+D
Sbjct: 338 ------SHGSNLPSANEILETWKKSRERD 360
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+I +++ G+ + + +L E ++ S N + L PDL Y+++L
Sbjct: 7 PNIGTINAMLKVYGRNDMFSKAKELFEETKR--STFASNTCMDDGSISLVPDLYTYSSML 64
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
A +HQW+ +V+K++ SG + + + L + ++GK+ L+ F + ++GE
Sbjct: 65 EASASAHQWEFFEYVYKEMTLSGYQLDQSKHALLLGKASRAGKWHLLEHAFDTILEAGE 123
>gi|147821457|emb|CAN72260.1| hypothetical protein VITISV_035448 [Vitis vinifera]
Length = 1032
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/446 (40%), Positives = 251/446 (56%), Gaps = 46/446 (10%)
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
YPD+ AYH +AVTLGQ G +KEL +I+ MR P K+ K + WDP LEPD++VYNAV
Sbjct: 536 YPDLVAYHCIAVTLGQAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIIVYNAV 595
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV---------------------- 358
LNACV QW+G FWV +QL++ KPS TYGL MEV
Sbjct: 596 LNACVRRKQWEGAFWVLQQLKQQSQKPSITTYGLVMEVVTLIETDSGGKSWLTNLVGFGR 655
Query: 359 --------------MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
M GKY+LVHEFF K+ KS ALTYKVLV W EGK +EAV
Sbjct: 656 EEGLEYIVEVDIGVMFVCGKYNLVHEFFWKVQKS-SIPNALTYKVLVNTLWREGKTDEAV 714
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
AV++ME+RGVVG+A++YY+LA CLC GR Q+A++ +EKI + + KPL +T+TGLI +
Sbjct: 715 LAVQDMEKRGVVGSAALYYDLARCLCXAGRCQEALMQIEKICKVAN-KPLVVTYTGLIQA 773
Query: 465 SMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+D G+I + IF M + C PN+ T N MLK Y + MF +AKELF + + + +
Sbjct: 774 CLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKELFGKML-GDGNRIS 832
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
S + PD YT+++M++A +W EYVY+ M G + +H ++++ASR
Sbjct: 833 SKSDYNDRVLPDIYTFNTMIDACBAEKRWHDLEYVYERMLRHGFHFNAKRHLRIILDASR 892
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA----PFHI 640
AGK LLE + L G +P PL E + + + AV+ I PF
Sbjct: 893 AGKEELLETTWKXLAGEGRVPPPL-IKERFCMKLEKGDCAAAVSSITGHXMKELQEPF-- 949
Query: 641 TERQWTELFESNEDRISRDKLEKLLN 666
++R W LF N R + L +L++
Sbjct: 950 SKRAWLNLFTENAGRFQTESLVELMH 975
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 127/291 (43%), Gaps = 13/291 (4%)
Query: 121 EKDLNWVLDDDVQL----GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWK 176
E+ L ++++ D+ + G W +K A +VLV+ L T +
Sbjct: 656 EEGLEYIVEVDIGVMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVNTLWREGKTDEAVL 715
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
V+ M + G++ + L + L G ++A+ ++ + + +K + YT L+
Sbjct: 716 AVQDMEKRGVVGSAALYYDLARCLCXAGRCQEALMQIEKICKVANKPLV---VTYTGLIQ 772
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
+G A IFN M E C+ P++ + + + + +E +L +M
Sbjct: 773 ACLDSGNIQNAAFIFNQMHEFCS--PNLITCNVMLKAYLEHRMFEEAKELFGKM-LGDGN 829
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
RI + N D VL PD+ +N +++AC +W + +V++++ + G +A + +
Sbjct: 830 RISSKSDYN-DRVL-PDIYTFNTMIDACBAEKRWHDLEYVYERMLRHGFHFNAKRHLRII 887
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
++GK +L+ ++ +A G L + E+G AV+++
Sbjct: 888 LDASRAGKEELLETTWKXLAGEGRVPPPLIKERFCMKL-EKGDCAAAVSSI 937
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L L+ ++ W F ++M + + FT+ +L++++ LG G+WR+A+ VL+W
Sbjct: 281 ERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRVIQILGKLGNWRRALQVLEW 340
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+ L RF KL I + +L +F +M+
Sbjct: 341 L-------QLHERFKSHKLSCI-----SENGSLVVFEVMV 368
>gi|296086989|emb|CBI33251.3| unnamed protein product [Vitis vinifera]
Length = 462
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 234/456 (51%), Gaps = 114/456 (25%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTL 61
EKIK+ L++ GV+PTPKI+ ++RKKEIQK RK ++ +Q Q SP++ + + EE HF+TL
Sbjct: 15 EKIKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQ-SPTEDEEVNEEAHFRTL 73
Query: 62 KREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFE 121
KRE+ +A+ +VGKPWER F+++ + S E+ G+ LKRE+LREL E+ E
Sbjct: 74 KREYTKLSKAL-------MVGKPWERP---GFKEILNGSVEYGGERLKREHLRELSEILE 123
Query: 122 K--DLNWVLDDDVQL--GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKF 177
K ++ W+LDDDV++ GS + W P +R +A+AIR LVDRL+ ++T ++WKF
Sbjct: 124 KRGEVRWLLDDDVEVEQGSSGNERR-GWSPARRRGGDADAIRFLVDRLTAADITIRDWKF 182
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDK--RDLKSRFVYTKLL 235
R+M QSGL FTE Q+L++++ LG +G W+ ++SV++W Y KDK R KS + TK+
Sbjct: 183 SRVMKQSGLQFTERQLLRIVEELGARGHWKHSLSVVEWAYTDKDKDNRRYKSS-ILTKVT 241
Query: 236 AI-----LGKAGRPHEALR----IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ + A P + + +F L C+L P+ A Y + Q G + +
Sbjct: 242 TLSHWYQVLNACVPTQQWKGVSWVFK-QLRKCSLKPNGATYGLAMEVMLQSGKYDHVHRF 300
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E+MR +SG
Sbjct: 301 FEKMR--------------------------------------------------RSGEA 310
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P A TY + + + GK + E R M
Sbjct: 311 PKALTYKVLVRAFWEEGKVNEAVEVVRDM------------------------------- 339
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
E+RGVVG ASVYYELACCLCNNGRWQDA++ V
Sbjct: 340 ----ERRGVVGIASVYYELACCLCNNGRWQDAIVEV 371
>gi|359497125|ref|XP_002271271.2| PREDICTED: uncharacterized protein LOC100243336 [Vitis vinifera]
Length = 609
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/123 (81%), Positives = 108/123 (87%)
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
VLNACVP+ QWKGV WVFKQLRK LKP+ ATYGLAMEVMLQSGKYD VH FF KM +SG
Sbjct: 387 VLNACVPTQQWKGVSWVFKQLRKCSLKPNGATYGLAMEVMLQSGKYDHVHRFFEKMRRSG 446
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
EA ALTYKVLVRAFWEEGK+NEAV VR+ME+RGVVG ASVYYELACCLCNNGRWQDA+
Sbjct: 447 EAPKALTYKVLVRAFWEEGKVNEAVEVVRDMERRGVVGIASVYYELACCLCNNGRWQDAI 506
Query: 440 LVV 442
+ V
Sbjct: 507 VEV 509
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 845 SRRSELPSASEILEAWKESREKDGIFFPFEHGKK 878
S S LPSA+EILE WK+SRE+DGIFFPF+ G+K
Sbjct: 576 SHGSNLPSANEILETWKKSRERDGIFFPFQLGQK 609
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 230/506 (45%), Gaps = 50/506 (9%)
Query: 145 WHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKG 204
+ PE + +EA L+ +S++E ++ + + + L+ T+ +++ +K LG +G
Sbjct: 97 YPPEGKPCDVSEAAHSLLASISKQEDSSDATELLEFIAGE-LVLTDSELVYFVKALGRQG 155
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYT-KLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
W++A+ V +W+ + K R V T +L++LG + AL +F + +D + D
Sbjct: 156 KWKKALEVFEWI---RKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLD 212
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---------------------RIKNMH 302
+ AY S+ L + E + L E M+++ + RI+++
Sbjct: 213 VYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLF 272
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
++ D + PD YN ++ AC+ + + +F++++++G P+ TY ++V +
Sbjct: 273 QEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKG 332
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G + E +M +G + +TY L+ A+ G +EA A +++ +G+ Y
Sbjct: 333 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTY 392
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
L R++ A+ +++ + P +T+ LI +DD + +F+ M+
Sbjct: 393 CTLISAFNRAERYEKALETFTEMRK-TNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ 451
Query: 483 D-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA----------------NSSGYTF 525
+ +C P++ T N++LK + M ++ +F E RA GY
Sbjct: 452 EKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVD 511
Query: 526 LSGD------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
S D L+P T+++++ + A +W+ E V + MA +G QL HA L+
Sbjct: 512 YSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLI 571
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIP 605
+ +G+ L D L ++ + P
Sbjct: 572 HSYANSGQFFQLRKYIDELEKSAKQP 597
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 165/376 (43%), Gaps = 45/376 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ I G+ + + +++F M E N PD+ ++S+ + G G+L E+
Sbjct: 426 TYNILIDIYGRMEKLDDMMKVFKFMQEK-NCTPDLVTWNSLLKSFGNCGMLTEV------ 478
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
S + M R + P ++ +N ++ ++K L ++GL+P+
Sbjct: 479 -----SNVFREMKRAGYMPGVD----TFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTV 529
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ M + + G++ + ++MA++G + + L+ ++ G+ + +
Sbjct: 530 PTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDE 589
Query: 410 MEQRG---VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+E+ + G + LA C C G +A L + ++ HS +++ F +I
Sbjct: 590 LEKSAKQPLSGILCKTFVLAYCKC--GMDNEAQLALNQLYDNGHSPDIKV-FNAMISMCA 646
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA------- 518
G I+ + + + + K +P+ T N ++ +Y R M+ KA+E+ E RA
Sbjct: 647 KRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLI 706
Query: 519 --NSSGYTF-----------LSGD--GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
N+ Y++ + GD A ++PD +T+++++ + ++ ++ V + M
Sbjct: 707 TYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYM 766
Query: 564 ALSGCQLDQTKHAWLL 579
GCQ Q LL
Sbjct: 767 TEHGCQPTQITFKALL 782
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/429 (19%), Positives = 176/429 (41%), Gaps = 35/429 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L++ +A R +AL F M N P+I Y+ + G++ L +++K+ +
Sbjct: 390 FTYCTLISAFNRAERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 448
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M++K PDLV +N++L + V VF++++++G P
Sbjct: 449 FMQEKNCT---------------PDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPG 493
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ + +E + G D + ++ + ++G T+ L+ + EG+ + +
Sbjct: 494 VDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQ 553
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMD 467
M + G+ + + + L N+G++ +++++ +PL I +++
Sbjct: 554 EMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEK-SAKQPLSGILCKTFVLAYCK 612
Query: 468 GGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G ++ + D+ P+I NAM+ + ++ +A +L EE +A
Sbjct: 613 CGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQ------- 665
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
LKPD TY+ ++ + E V M +G + + LL ++ G
Sbjct: 666 ------LKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHG 719
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITER 643
+ F ++ A P F ++ Y++A+++I M P IT +
Sbjct: 720 RMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFK 779
Query: 644 QWTELFESN 652
+ + N
Sbjct: 780 ALLDGYNRN 788
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 37/205 (18%)
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
+D PD+ V+NA+++ C + + +++RK+ LKP TY M + + G Y
Sbjct: 627 YDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMY 686
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
E +M ++G+A +TY L+ ++ +
Sbjct: 687 YKAEEVMSEMRRAGKAPNLITYNTLLYSYTK----------------------------- 717
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 484
+GR DA V + + R +P TF L+ S G + +S+ ++M +H
Sbjct: 718 ------HGRMDDAARVFGDMVAAR-VRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHG 770
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAK 509
C+P T A+L Y+RN S+ K
Sbjct: 771 CQPTQITFKALLDGYNRNASPSRKK 795
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 108/309 (34%), Gaps = 53/309 (17%)
Query: 329 QWKGVFWVFKQLRK-SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS-GEAIGALT 386
+WK VF+ +RK K + V+ + E F + + ++
Sbjct: 156 KWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYA 215
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG-RWQDAMLVVEKI 445
Y L+ + +E + M++ G G A Y + G W + +++
Sbjct: 216 YTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEM 275
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM 504
K L S P + T+ +I + + H + + +FQ MK+ C PN T NA+L VY + M
Sbjct: 276 KDLEIS-PDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGM 334
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
+A EL E + A + P+ TY+ ++ A A
Sbjct: 335 HKEASELLVEM-------------EAAGISPNIVTYNELIAAYA---------------- 365
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 624
RAG C SLL G P + ++ YE
Sbjct: 366 -------------------RAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYE 406
Query: 625 KAVALINAM 633
KA+ M
Sbjct: 407 KALETFTEM 415
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 390 LVRAFWEEGKINEAVAAVRNMEQ------RGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
V+A +GK +A+ + + RGV TAS+ L N+ + A+ + E
Sbjct: 147 FVKALGRQGKWKKALEVFEWIRKHDCFKLRGV-ATASILSVLG----NHEQLPAALELFE 201
Query: 444 KIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYS- 500
+K S L++ +T LI D+ I++F+ M+ + N T N ML +Y
Sbjct: 202 SLKQ-DESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGK 260
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
R D + + + LF+E + PD+YTY++M+ A + ++
Sbjct: 261 RGDSWDRIQSLFQEMKDLE-------------ISPDDYTYNTMITACIQNSHCQEALRLF 307
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEML 614
+ M +GC ++ + LL GK + + A + L+E AG P+ + + E++
Sbjct: 308 QEMKEAGCCPNRVTYNALL---DVYGKGGMHKEASELLVEMEAAGISPNIVTYNELI 361
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 214/493 (43%), Gaps = 38/493 (7%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK-LLAIL 238
++ S + ++L ++KGLG +G W +A+ V +W ++ + + V +L IL
Sbjct: 36 VLTTSEPNLSSSELLSIMKGLGREGQWNKALEVFNW---MRQSVNFRPDGVTIAVMLRIL 92
Query: 239 GKAGRPHEALRIFNLMLEDCNLYP-DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
G+ + R+F + E+ YP D+ AY S+ L + KE + E+M++
Sbjct: 93 GRESQLTTVSRLFKSLREEG--YPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGP-- 148
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+P LV YN +++ W+ + +F++++ G++P TY A+
Sbjct: 149 -------------QPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAI 195
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ E F +M S +TY L+ + + G NEA ++ ME G +
Sbjct: 196 TACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCL 255
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
Y EL G A + + + S + +P T+T L+ + G ++ +
Sbjct: 256 PNIVTYNELLSAFGRAGLCNAAAEMKDSMVS-KGIEPDVFTYTSLLSAYSRAGKVEQAME 314
Query: 477 IFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
I+ M+ +C PN T NA++ ++ +N FS+ +FE+ ++P
Sbjct: 315 IYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDM-------------QACGVEP 361
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
D T++S+L A + V++GM +G + D+ L+ R G +
Sbjct: 362 DIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIY 421
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 655
D +L+AG P F +L + +E A +++ + + + + + + + +
Sbjct: 422 DGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANG 481
Query: 656 ISRDKLEKLLNAL 668
+KL+++++ L
Sbjct: 482 GELEKLKEMVDTL 494
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/505 (18%), Positives = 182/505 (36%), Gaps = 104/505 (20%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K R Y LL + GKAG +EA + M E P+I Y+ + G+ G
Sbjct: 214 MKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEM-ESAGCLPNIVTYNELLSAFGRAG 272
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA--------------- 323
L ++ + M K +EPD+ Y ++L+A
Sbjct: 273 LCNAAAEMKDSMVSKG---------------IEPDVFTYTSLLSAYSRAGKVEQAMEIYN 317
Query: 324 ------CVPSH--------------QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
C P+ + + +F+ ++ G++P T+ + ++G
Sbjct: 318 QMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNG 377
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
Y V + FR M K+G T+ +L+ A+ G ++A++ M Q G + +
Sbjct: 378 MYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFN 437
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH------------- 470
L L GRW+ A L+++++ + KP +I + ++ + +GG
Sbjct: 438 TLLAALAREGRWEHAELILDELNRSSY-KPNDIAYASMLHAYANGGELEKLKEMVDTLHT 496
Query: 471 ----------------------IDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSK 507
+D+ F M+ H + T NAM+ +Y + M K
Sbjct: 497 IYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDK 556
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A + F L G L+PD TY+ ++ + E + +G
Sbjct: 557 ATDTF-----------ALLRSTG--LEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAG 603
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
D + ++ S+ G+ F ++ G P + + + + +A+
Sbjct: 604 QTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEAL 663
Query: 628 ALINAM---AYAPFHITERQWTELF 649
+++ M P +T R + +
Sbjct: 664 SVVKHMHKTGCKPDEVTYRTLVDAY 688
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 169/450 (37%), Gaps = 76/450 (16%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+LL G G A + D + + D+ F YT LL+ +AG+ +A+ I+N M
Sbjct: 263 ELLSAFGRAGLCNAAAEMKDSMVSKGIEPDV---FTYTSLLSAYSRAGKVEQAMEIYNQM 319
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
N P+ ++++ G+ E++ + E M+ +EPD+
Sbjct: 320 -RTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACG---------------VEPDI 363
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V +N++L A + + V VF+ ++K+G +P AT+ + +E + G D +
Sbjct: 364 VTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDG 423
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M ++G T+ L+ A EG+ A + + + Y + N G
Sbjct: 424 MLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGE 483
Query: 435 WQDAMLVVEKIKS--------------------------------LRHSKPLEITFTGLI 462
+ +V+ + + +RH L T T
Sbjct: 484 LEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNA 543
Query: 463 ISSMDG--GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA- 518
+ SM G G +D F ++ EP++ T N ++ +Y R M+ K + E A
Sbjct: 544 MISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAG 603
Query: 519 ---------------------NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
+S+ F ++PD +TY++ + +
Sbjct: 604 QTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEAL 663
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
V K M +GC+ D+ + L+ + GK
Sbjct: 664 SVVKHMHKTGCKPDEVTYRTLVDAYCKIGK 693
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 159/409 (38%), Gaps = 48/409 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G QAM + + ++ + F + L+ + GK E + IF M
Sbjct: 299 LLSAYSRAGKVEQAMEIYNQ---MRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDM- 354
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW------ 306
+ C + PDI ++S+ G+ G+ E++K+ M++ +P K N+ + +
Sbjct: 355 QACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSS 414
Query: 307 -------DPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D +L+ PDL +N +L A +W+ + +L +S KP+ Y
Sbjct: 415 DQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASM 474
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ G+ + + E + + K V + + ++EA A M G
Sbjct: 475 LHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGY 534
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC- 474
+ S + + G A ++S +P +T+ L+ G C
Sbjct: 535 LSDTSTFNAMISMYGKKGMMDKATDTFALLRS-TGLEPDVVTYNCLMGMYGREGMYRKCE 593
Query: 475 ISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYT-----F 525
++ + M P++ + N ++ YS++ S A +F E + +S Y +
Sbjct: 594 ATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCY 653
Query: 526 LSGDGAP-------------LKPDEYTYSSMLEASATAHQWEYFEYVYK 561
++G P KPDE TY ++++A ++E E + K
Sbjct: 654 VNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILK 702
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 125/345 (36%), Gaps = 65/345 (18%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ + M ++ K R M ++G + L++ G GS QA+S+ D +
Sbjct: 369 LLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAG 428
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN---LYPDIAAYHSVA---VTL 274
DL + + LLA L + GR A L+L++ N P+ AY S+
Sbjct: 429 CTPDLAT---FNTLLAALAREGRWEHA----ELILDELNRSSYKPNDIAYASMLHAYANG 481
Query: 275 GQVGLLKELVKLIERMRQKPSKRI------------------------------------ 298
G++ LKE+V + + +K +
Sbjct: 482 GELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTF 541
Query: 299 ---------KNMHRKNWDPV-------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
K M K D LEPD+V YN ++ ++ ++
Sbjct: 542 NAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMA 601
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
+G P +Y + + G+ F +M +G + TY V + G E
Sbjct: 602 AGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPE 661
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
A++ V++M + G Y L C G++++ +++ IKS
Sbjct: 662 ALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKS 706
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 26/164 (15%)
Query: 230 VYTKLLAILGKAG--RPHEALRIFNLMLEDC---NLYPDIAAYHSVAVTLGQVGLLKELV 284
Y L+ + G+ G R EA L +C PD+ +Y++V + + G L
Sbjct: 575 TYNCLMGMYGREGMYRKCEA------TLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSAT 628
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
++ M ++PD YN + V + V K + K+G
Sbjct: 629 RIFHEMVSNG---------------IQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTG 673
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
KP TY ++ + GK++ V + + S Y+
Sbjct: 674 CKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAYR 717
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 192/431 (44%), Gaps = 46/431 (10%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
+L ++KGLG + A+S+ D++ D+ L + V +++ILGK GR A + +
Sbjct: 109 ILGIIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLH 168
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS----KRIKNMHRKN 305
LE D+ Y S+ ++ +K+ +M++ +P+ I N++ K
Sbjct: 169 -NLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKM 227
Query: 306 WDP--------------VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
P L PDL YN +++ C ++ +F++++ +G +P A T
Sbjct: 228 GMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVT 287
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y ++V +S + E ++M + +TY LV A+ G + +A+ R M
Sbjct: 288 YNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMV 347
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+G+ Y L N G+ + AM V E+++ + KP TF LI D G
Sbjct: 348 DKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKV-GCKPNICTFNALIKMYGDRGKF 406
Query: 472 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA-----NSSGYTF 525
++ + +F+ +K C P+I T N +L V+ +N M S+ +FEE R+ + T
Sbjct: 407 EEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTL 466
Query: 526 LSGDG-----------------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+S G A + PD TY+++L A WE E V M GC
Sbjct: 467 ISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGC 526
Query: 569 QLDQTKHAWLL 579
+ ++ ++ LL
Sbjct: 527 KPNEVTYSSLL 537
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/405 (17%), Positives = 155/405 (38%), Gaps = 29/405 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT LL+ AG+ A+ +F M P+I ++++ G G +E+VK+ +
Sbjct: 356 YTYTTLLSGFVNAGKEELAMEVFEEM-RKVGCKPNICTFNALIKMYGDRGKFEEMVKVFK 414
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ PD+V +N +L + V VF+++++S P
Sbjct: 415 EIKVCKC---------------SPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPE 459
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ + + G +D +++M ++G + TY ++ G ++ +
Sbjct: 460 RDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLA 519
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M+ G Y L N + + E+I S + T ++++S
Sbjct: 520 EMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVD 579
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
++ + + K P++ T NAML +Y R M KA E+ + + SG
Sbjct: 580 LLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEIL---------NFMYESG 630
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
L +Y+S++ + + E +++ + G + D + ++ R
Sbjct: 631 LTLSLT----SYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMM 686
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ + + +P + + + S + +A+ +I M
Sbjct: 687 DEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYM 731
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L G K +A +L+++Y L S Y L+ + + H++ +IF +L
Sbjct: 606 MLSIYGRKKMVPKANEILNFMYESGLTLSLTS---YNSLMYMYSRTENFHKSEQIFREIL 662
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D + PD+ +Y+ V + ++ E ++IE M+ P PD+V
Sbjct: 663 -DKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKV---------------PAPVPDVV 706
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
YN + A + V + + K G KP+ TY
Sbjct: 707 TYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTY 743
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 209/462 (45%), Gaps = 49/462 (10%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT-KLLAILGKAGRPHEA 247
T+ +++ +K LG +G W++A+ V +W+ + K R V T +L++LG + A
Sbjct: 1 TDSELVYFVKALGRQGKWKKALEVFEWI---RKHDCFKLRGVATASILSVLGNHEQLPAA 57
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK----------- 296
L +F + +D + D+ AY S+ L + E + L E M+++ +
Sbjct: 58 LELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLD 117
Query: 297 ----------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
RI+++ ++ D + PD YN ++ AC+ + + +F++++++G
Sbjct: 118 LYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCC 177
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++V + G + E +M +G + +TY L+ A+ G +EA A
Sbjct: 178 PNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAAL 237
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+++ +G+ Y L R++ A+ +++ + P +T+ LI
Sbjct: 238 KKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRK-TNCTPNIVTYNILIDIYG 296
Query: 467 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA------- 518
+DD + +F+ M++ +C P++ T N++LK + M ++ +F E RA
Sbjct: 297 RMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVD 356
Query: 519 ---------NSSGYTFLSGD------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
GY S D L+P T+++++ + A +W+ E V + M
Sbjct: 357 TFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEM 416
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
A +G QL HA L+ + +G+ L D L ++ + P
Sbjct: 417 AEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP 458
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 165/379 (43%), Gaps = 51/379 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ I G+ + + +++F M E N PD+ ++S+ + G G+L E+
Sbjct: 287 TYNILIDIYGRMEKLDDMMKVFKFMQEK-NCTPDLVTWNSLLKSFGNCGMLTEV------ 339
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
S + M R + P ++ +N ++ ++K L ++GL+P+
Sbjct: 340 -----SNVFREMKRAGYMPGVD----TFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTV 390
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ M + + G++ + ++MA++G + + L+ ++ G+ + +
Sbjct: 391 PTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDE 450
Query: 410 MEQR------GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+E+ G++ V CC+ N +A L + ++ HS +++ F +I
Sbjct: 451 LEKSAKQPLSGILCKTFVLAYCKCCMDN-----EAQLALNQLYDNGHSPDIKV-FNAMIS 504
Query: 464 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA---- 518
G I+ + + + + K +P+ T N ++ +Y R M+ KA+E+ E RA
Sbjct: 505 MCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAP 564
Query: 519 -----NSSGYTF-----------LSGD--GAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
N+ Y++ + GD A ++PD +T+++++ + ++ ++ V
Sbjct: 565 NLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVI 624
Query: 561 KGMALSGCQLDQTKHAWLL 579
+ M GCQ Q LL
Sbjct: 625 EYMTEHGCQPTQITFKALL 643
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/412 (19%), Positives = 172/412 (41%), Gaps = 40/412 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L++ +A R +AL F M + N P+I Y+ + G++ L +++K+ +
Sbjct: 251 FTYCTLISAFNRAERYEKALETFTEMRKT-NCTPNIVTYNILIDIYGRMEKLDDMMKVFK 309
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M++K PDLV +N++L + V VF++++++G P
Sbjct: 310 FMQEKNCT---------------PDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPG 354
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ + +E + G D + ++ + ++G T+ L+ + EG+ + +
Sbjct: 355 VDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQ 414
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M + G+ + + + L N+G++ +++++ +PL +G++ +
Sbjct: 415 EMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEK-SAKQPL----SGILCKTFVL 469
Query: 469 GHIDDC------ISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ C +++ Q + P+I NAM+ + ++ +A +L EE +A
Sbjct: 470 AYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQ--- 526
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
LKPD TY+ ++ + E V M +G + + LL
Sbjct: 527 ----------LKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSY 576
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
++ G+ F ++ A P F ++ Y++A+++I M
Sbjct: 577 TKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMT 628
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 37/195 (18%)
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
+D PD+ V+NA+++ C + + +++RK+ LKP TY M + + G Y
Sbjct: 488 YDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMY 547
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
E +M ++G+A +TY L+ ++ +
Sbjct: 548 HKAEEVMSEMRRAGKAPNLITYNTLLYSYTK----------------------------- 578
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 484
+GR DA V + + R +P TF L+ S G + +S+ ++M +H
Sbjct: 579 ------HGRMDDAARVFGDMVAAR-VRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHG 631
Query: 485 CEPNIGTVNAMLKVY 499
C+P T A+L Y
Sbjct: 632 CQPTQITFKALLDGY 646
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 108/309 (34%), Gaps = 53/309 (17%)
Query: 329 QWKGVFWVFKQLRK-SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS-GEAIGALT 386
+WK VF+ +RK K + V+ + E F + + ++
Sbjct: 17 KWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYA 76
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG-RWQDAMLVVEKI 445
Y L+ + +E + M++ G G A Y + G W + +++
Sbjct: 77 YTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEM 136
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM 504
K L S P + T+ +I + + H + + +FQ MK+ C PN T NA+L VY + M
Sbjct: 137 KDLEIS-PDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGM 195
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
+A EL E + A + P+ TY+ ++ A A
Sbjct: 196 HKEASELLVEM-------------EAAGISPNIVTYNELIAAYA---------------- 226
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 624
RAG C SLL G P + ++ YE
Sbjct: 227 -------------------RAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYE 267
Query: 625 KAVALINAM 633
KA+ M
Sbjct: 268 KALETFTEM 276
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 390 LVRAFWEEGKINEAVAAVRNMEQ------RGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
V+A +GK +A+ + + RGV TAS+ L N+ + A+ + E
Sbjct: 8 FVKALGRQGKWKKALEVFEWIRKHDCFKLRGV-ATASILSVLG----NHEQLPAALELFE 62
Query: 444 KIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYS- 500
+K S L++ +T LI D+ I++F+ M+ + N T N ML +Y
Sbjct: 63 SLKQ-DESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGK 121
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
R D + + + LF+E S PD+YTY++M+ A + ++
Sbjct: 122 RGDSWDRIQSLFQEMKDLEIS-------------PDDYTYNTMITACIQNSHCQEALRLF 168
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEML 614
+ M +GC ++ + LL GK + + A + L+E AG P+ + + E++
Sbjct: 169 QEMKEAGCCPNRVTYNALL---DVYGKGGMHKEASELLVEMEAAGISPNIVTYNELI 222
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 190/463 (41%), Gaps = 47/463 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ LG G W A+ V+ + K +L + Y L+ LGKAG+ EALR+ M
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKGCKPNL---WTYNTLVDCLGKAGQFDEALRLLAEM- 105
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR------------------------ 291
D PD+ Y+ + TLG+ G L E L MR
Sbjct: 106 RDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRS 165
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
QK + ++ M R PD++ Y++++ + F +F+++++ G KP + T
Sbjct: 166 QKAMELLEEMERHG----CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSIT 221
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
+ M+ + ++G+ D E +M + G G +TY L+ F + G + EA + M+
Sbjct: 222 FTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMK 281
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+ G Y L L + +A V++K++ P IT+ LI G +
Sbjct: 282 RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEK-EGCPPDTITYNTLINGLGKAGLL 340
Query: 472 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+D +F MK C P++ T + ++ + A LFEE +
Sbjct: 341 NDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM-------------ES 387
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
++PD +TY S++ A Q + + ++ M G D + L R G+
Sbjct: 388 VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKE 447
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
F+ + E+G +P + +L+ + A L+ +
Sbjct: 448 ARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL 490
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 160/407 (39%), Gaps = 63/407 (15%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P++ Y+S+ L + G +E L E ++ W PD+V Y+ ++
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAA-----------KW----TPDVVSYSCLI 51
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N+ + +W+ V +++ G KP+ TY ++ + ++G++D +M +G
Sbjct: 52 NSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCV 111
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
TY L+ + G+++EA M +RG V Y L L GR Q AM +
Sbjct: 112 PDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMEL 171
Query: 442 VEKIK------------SL----------------------RHSKPLEITFTGLIISSMD 467
+E+++ SL R KP ITFT L+ +
Sbjct: 172 LEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGK 231
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +DD + + MK+ +P + T NA++ + + +A L +E R
Sbjct: 232 AGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC------ 285
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
KPD TYS ++ A Q + V K M GC D + L+ +AG
Sbjct: 286 -------KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAG 338
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ FD + G P + ++ ++ + E A L M
Sbjct: 339 LLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM 385
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 20/286 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GLG G A + D +K K Y+ L+ LGKA R A +F M
Sbjct: 330 LINGLGKAGLLNDAGRLFDR---MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM- 385
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + PD+ Y S+ LG+ G + + +L MR K L PD++
Sbjct: 386 ESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG---------------LSPDVI 430
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNA LN+ ++K +F+ +++SGL P ATY + + ++ + D +++
Sbjct: 431 TYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL 490
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G A +L + + G ++EA ++ +G+ AS Y L L GR
Sbjct: 491 IEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRV 550
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
+A +E +K + KP ++++ LI + G ID + + M
Sbjct: 551 SEAFNTLEDLKE-QGGKPDIVSYSSLISALGQTGQIDTAFELLEEM 595
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 163/385 (42%), Gaps = 55/385 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
L+ G G G +A ++LD + K D+ Y+ L+ L KA + EA ++ M
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDV---VTYSCLITGLIKASQLDEACQVLKKME 316
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E C PD Y+++ LG+ GLL + +L +RM+ K PD+
Sbjct: 317 KEGCP--PDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCN---------------PDV 359
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V Y+ ++ A + + + +F+++ G++P TY + V+ ++G+ D F +
Sbjct: 360 VTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G + +TY + + G+ EA +M++ G++ + Y L L
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479
Query: 435 WQDAMLVVEKI-------KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE- 486
DA +++++ SL+ + LEI ++S G++D+ + Q
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEI------LTSW--GNVDEAHELLQFANSKGLW 531
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P + NA++ ++ S+A E+ KPD +YSS++ A
Sbjct: 532 PGASSYNALIDALAKAGRVSEAFNTLEDLKEQGG-------------KPDIVSYSSLISA 578
Query: 547 SATAHQ----WEYFEYVYK-GMALS 566
Q +E E + K G+ LS
Sbjct: 579 LGQTGQIDTAFELLEEMSKRGLKLS 603
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 27/193 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV-------GLLK 281
Y L LG+ GR EA +IF M E L PD+A Y ++ + L + GLLK
Sbjct: 430 ITYNAFLNSLGRGGRFKEARKIFEDMKES-GLLPDVATYDALLLGLSKTKEVDDACGLLK 488
Query: 282 ELVKLIERMRQKPSKRIKNMHR--KNWDPVLE--------------PDLVVYNAVLNACV 325
EL IE+ S + +W V E P YNA+++A
Sbjct: 489 EL---IEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALA 545
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ + F + L++ G KP +Y + + Q+G+ D E +M+K G +
Sbjct: 546 KAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPR 605
Query: 386 TYKVLVRAFWEEG 398
+Y LVR + G
Sbjct: 606 SYSNLVRKLQDWG 618
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 196/482 (40%), Gaps = 45/482 (9%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
+R M GL ++ G G +G W++A+SVL + K Y +
Sbjct: 237 LLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLT---EMSAKGLTPETISYNMAIR 293
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP-- 294
G++GR EA+ + M E + PD+ +Y + G G + V L++ M +
Sbjct: 294 ACGRSGRWKEAVEVLRQM-ESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVA 352
Query: 295 -------SKRIKNMHRKNWDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWV 336
S + W+ +E PD +N+ + AC S +WK +
Sbjct: 353 PNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALEL 412
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
K++ LKP A +Y A+E + G++++ E R+M G ++ + +RA E
Sbjct: 413 LKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGE 472
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G+ E + +R M +G+ Y G+W+ A+ ++ K+K L + P I
Sbjct: 473 RGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMT-PDSI 531
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ I + G + +++ + M P++ + A + Y +N + +A EL +
Sbjct: 532 TYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQM 591
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
L P+ TY+S+++A +WE + K + + D +
Sbjct: 592 PTKG-------------LTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSY 638
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
+ S GK E A D L E G P + +T + + +EKA+ L+N
Sbjct: 639 NLAI---SACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNL 695
Query: 633 MA 634
M
Sbjct: 696 MG 697
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 175/464 (37%), Gaps = 81/464 (17%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G WR+A+ +LD + + + YT + G+ G+ +AL + + E + P+
Sbjct: 124 GKWREALGILDEM----KEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPN 179
Query: 264 IAAYHSVAVTLGQ-------VGLLKEL---------------VKLIERMRQKPSKRIKNM 301
+ Y+S G V LL+E+ +K R Q +R+ +
Sbjct: 180 VFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQW--ERVIGL 237
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
R+ L PD + YN+V+ C QWK V ++ GL P +Y +A+ +
Sbjct: 238 LREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGR 297
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
SG++ E R+M G ++Y ++A G+ +V + M RGV ++
Sbjct: 298 SGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVA-PNTI 356
Query: 422 YYELACCLCN-NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
++ A C G+W+ A ++ LR E+T GL
Sbjct: 357 HFNSAIVACGKGGQWEKA------VELLR-----EVTALGLT------------------ 387
Query: 481 MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
P+ + N+ + +++ + +A EL +E LKPD +Y
Sbjct: 388 ------PDATSFNSAIAACTKSGRWKEALELLKEMPAKR-------------LKPDAISY 428
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+S +EA QWE + + M G + + G+ +
Sbjct: 429 NSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPA 488
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHIT 641
G P+ + + + +EKA+ L+ M A P IT
Sbjct: 489 QGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSIT 532
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 149/355 (41%), Gaps = 37/355 (10%)
Query: 110 RENLRELKEMFEKDLNWVLDDDVQLGS--DYFAKNVEWH---------PEKRWRSEAEAI 158
+E L LKEM K L D + S + K +W P K +
Sbjct: 407 KEALELLKEMPAKRLK---PDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISS 463
Query: 159 RVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
+ + ER + + +R M GL +K G G W +A LD +
Sbjct: 464 NIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKA---LDLLAK 520
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K+ Y +A K GR EA+ + M L PD+ +Y + G+ G
Sbjct: 521 MKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQ-GLTPDVISYTAAIDAYGKNG 579
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ V+L +RQ P+K L P+++ YN+V+ AC +W+ + K
Sbjct: 580 QWERAVEL---LRQMPTKG------------LTPNVITYNSVIKACGRGGEWEKALDLLK 624
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+L+++ + P +Y LA+ + G+++ + R+M G ++Y +RA EG
Sbjct: 625 ELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEG 684
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCN-NGRWQDAMLVVEKI--KSLRH 450
+ +A+ + M GV TA+ Y LA C GR ++A+ +V ++ + L H
Sbjct: 685 EWEKALGLLNLMGAHGVSPTAT-SYSLAIEACGKGGRREEAVCLVREMAQRGLSH 738
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
+G W++A+++L + G D+ S YT + GK G+ A+ + M L P
Sbjct: 543 RGRWKEAVALLREMPGQGLTPDVIS---YTAAIDAYGKNGQWERAVELLRQMPTK-GLTP 598
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKNWDPVLE-- 311
++ Y+SV G+ G ++ + L++ +++ P N+ R W+ L+
Sbjct: 599 NVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLL 658
Query: 312 ---------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
PD++ Y + + AC +W+ + + G+ P+A +Y LA+E +
Sbjct: 659 REMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKG 718
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
G+ + R+MA+ G + ++ ++V A ++ K
Sbjct: 719 GRREEAVCLVREMAQRGLSHRNISNSLIVEALGDDAK 755
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 187/442 (42%), Gaps = 36/442 (8%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+K R M ++G M LL GL G +A +LD ++++ +F Y L
Sbjct: 216 YKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE---MRERGLQPDKFSYDTL 272
Query: 235 LAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+A L K G+ AL++F + DC PD+ AY ++ L + G L E KL E+MR+
Sbjct: 273 MAGLCKTGKIDMALKVFEDNSNGDCP--PDVVAYSTLIAGLCKAGRLDEACKLFEKMREN 330
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
EPD+V + A+++ + + V + + P+ TY
Sbjct: 331 SC---------------EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
++ + ++G+ E F++M G +TY L+ F ++ A+ + M
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 435
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G + Y L LC GR +A + +K+ + P IT++ LI ID
Sbjct: 436 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA-KFCNPDVITYSCLIGGFCKLERIDM 494
Query: 474 CISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
++F M K P++ T + +++ Y + A+ L EE ++ S
Sbjct: 495 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS----------- 543
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
PD YTY+S+++ + V K MA GCQ + + L+ RAGK +
Sbjct: 544 --PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 601
Query: 593 HAFDSLLEAGEIPHPLFFTEML 614
+ ++ G P+ + + ++
Sbjct: 602 RLLEEMVGNGVQPNVITYRSLI 623
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 34/314 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ YN ++N H+ + + K++++SGL P+ TY + + K D ++
Sbjct: 159 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 218
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
FR+M ++G +TY L+ G ++EA + M +RG+ Y L LC
Sbjct: 219 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 278
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
G+ A+ V E S P + ++ LI G +D+ +F+ M+++ CEP++
Sbjct: 279 TGKIDMALKVFED-NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVV 337
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T A++ + D +A+++ E N + P+ TYSS+++
Sbjct: 338 TFTALMDGLCKGDRLQEAQQVLETMEDRNCT-------------PNVITYSSLIDGLCKT 384
Query: 551 HQWEYFEYVYKGMALSG---------------CQLDQTKHAWLLVEASRAGKC--HLLEH 593
Q + V+K M + G C + A LL+E A C ++ +
Sbjct: 385 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 444
Query: 594 --AFDSLLEAGEIP 605
D L + G P
Sbjct: 445 NTLIDGLCKTGRAP 458
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/354 (17%), Positives = 136/354 (38%), Gaps = 47/354 (13%)
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
P ++ H + + ++ YN + A + + + + K G+ P+ TY
Sbjct: 4 PDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYA 63
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA----------------------------- 384
+ ++ + +SG D E +M +SG A
Sbjct: 64 VVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE 123
Query: 385 ---LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+T+ +++ + ++ EA M+++G V Y L C + A L+
Sbjct: 124 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 183
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
++++K P +T++ +I +D +F+ M ++ C PN+ T N +L
Sbjct: 184 LKEMKE-SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
RN + +A EL +E L+PD+++Y +++ + + V+
Sbjct: 243 RNGLMDEAYELLDEMRERG-------------LQPDKFSYDTLMAGLCKTGKIDMALKVF 289
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + C D ++ L+ +AG+ F+ + E P + FT ++
Sbjct: 290 EDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALM 343
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 121/310 (39%), Gaps = 32/310 (10%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
L Y L+ L K GR EA R+F M + CN PD+ Y L+
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN--PDVITYSC---------LIGGF 486
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
KL ER+ +M R +D +L+ PD+V ++ ++ + + ++
Sbjct: 487 CKL-ERI---------DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ S P TY ++ + G+ ++MAK G +TY L+ AF GK
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
A + M GV Y L C G ++A ++E+++ + K +
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYR 656
Query: 460 GLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN-AMLKVYSRNDMFSKAKELFEETT-- 516
++ G + + + + +K P + A+++ + KA E+ EE T
Sbjct: 657 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716
Query: 517 ---RANSSGY 523
R N+ Y
Sbjct: 717 RKSRPNAEAY 726
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 109/308 (35%), Gaps = 54/308 (17%)
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
P + W KQ G + TY E +L++ + D + G
Sbjct: 4 PDAALRFFHWASKQ---QGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVF 60
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY V+++ + G +++A + M + G V A++Y + LC
Sbjct: 61 TYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALC--------------- 105
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMF 505
K+ +K L+ F+ M+ CE N+ T M+ D
Sbjct: 106 KARNTAKALDY---------------------FRSME--CEKNVITWTIMI------DGL 136
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
KA L E TT F P+E+TY+ ++ H+ + K M
Sbjct: 137 CKANRLPEATTY-------FAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 189
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
SG + ++ ++ R K F ++E G +P+ + + +L ++
Sbjct: 190 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 249
Query: 626 AVALINAM 633
A L++ M
Sbjct: 250 AYELLDEM 257
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 187/442 (42%), Gaps = 36/442 (8%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+K R M ++G M LL GL G +A +LD ++++ +F Y L
Sbjct: 97 YKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE---MRERGLQPDKFSYDTL 153
Query: 235 LAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+A L K G+ AL++F + DC PD+ AY ++ L + G L E KL E+MR+
Sbjct: 154 MAGLCKTGKIDMALKVFEDNSNGDCP--PDVVAYSTLIAGLCKTGRLDEACKLFEKMREN 211
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
EPD+V + A+++ + + V + + P+ TY
Sbjct: 212 SC---------------EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
++ + ++G+ E F++M G +TY L+ F ++ A+ + M
Sbjct: 257 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 316
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G + Y L LC GR +A + +K+ + P IT++ LI ID
Sbjct: 317 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA-KFCNPDVITYSCLIGGFCKLERIDM 375
Query: 474 CISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
++F M K P++ T + +++ Y + A+ L EE ++ S
Sbjct: 376 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS----------- 424
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
PD YTY+S+++ + V K MA GCQ + + L+ RAGK +
Sbjct: 425 --PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 482
Query: 593 HAFDSLLEAGEIPHPLFFTEML 614
+ ++ G P+ + + ++
Sbjct: 483 KLLEEMVGNGVQPNVITYRSLI 504
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 133/315 (42%), Gaps = 34/315 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ YN ++N H+ + + K++++SGL P+ TY + + K D ++
Sbjct: 40 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 99
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
FR+M ++G +TY L+ G ++EA + M +RG+ Y L LC
Sbjct: 100 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
G+ A+ V E S P + ++ LI G +D+ +F+ M+++ CEP++
Sbjct: 160 TGKIDMALKVFED-NSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVV 218
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T A++ + D +A+++ E N + P+ TYSS+++
Sbjct: 219 TFTALMDGLCKGDRLQEAQQVLETMEDRNCT-------------PNVITYSSLIDGLCKT 265
Query: 551 HQWEYFEYVYKGMALSG---------------CQLDQTKHAWLLVEASRAGKC--HLLEH 593
Q + V+K M + G C + A LL+E A C ++ +
Sbjct: 266 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 325
Query: 594 --AFDSLLEAGEIPH 606
D L + G P
Sbjct: 326 NTLIDGLCKTGRAPE 340
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 137/328 (41%), Gaps = 24/328 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P++V Y+ V++ + + +F+Q+ ++G P+ TY + + ++G D +
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E +M + G +Y L+ + GKI+ A+ + Y L L
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C GR +A + EK++ +P +TFT L+ G + + + + M+D +C PN
Sbjct: 193 CKTGRLDEACKLFEKMRE-NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 251
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEE-----------TTRANSSGYTFLSG-DGAPL--- 533
+ T ++++ + A+E+F+ T + G+ +G D A L
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311
Query: 534 -------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
PD TY+++++ + ++ M C D ++ L+ +
Sbjct: 312 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 371
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + FD +L+ +P + F+ ++
Sbjct: 372 RIDMARTLFDDMLKQAVLPDVVTFSTLV 399
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/325 (17%), Positives = 141/325 (43%), Gaps = 15/325 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
E +++ + +++ +++ F +++K G P+ TY + + + K +
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
++M +SG A +TY ++ F + K++ A R M + G + Y L LC
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNI 489
NG +A ++++++ R +P + ++ L+ G ID + +F+ + C P++
Sbjct: 124 RNGLMDEAYELLDEMRE-RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+ ++ + +A +LFE+ R NS +PD T++++++
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEK-MRENSC------------EPDVVTFTALMDGLCK 229
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + + V + M C + ++ L+ + G+ + F ++ G P+ +
Sbjct: 230 GDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 289
Query: 610 FTEMLIQAIVQSNYEKAVALINAMA 634
+ ++ + + + A+ L+ M
Sbjct: 290 YNSLIHGFCMTNGVDSALLLMEEMT 314
>gi|298714808|emb|CBJ25707.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1273
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 189/429 (44%), Gaps = 32/429 (7%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
W +A +L +K + + YT+L++I G++G H+AL + L P++
Sbjct: 730 WDKAEEILSM---MKSRAIKPNEVTYTELISICGRSGDVHQALAQLERARRN-GLSPNLI 785
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y++ + G + + L+E+M+ + DP L PDLV +N+V+NAC
Sbjct: 786 NYNACVDVCAKTGEVDRALALLEQMQT------------SGDPALTPDLVTFNSVINACA 833
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ W W+F +++ +GLK ++ A++ + + ++M G A+
Sbjct: 834 KAGDWALTLWLFSEIKAAGLKADIQSFNAALDACTKGSNPEAALALLKRMKSQGLEPDAI 893
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+Y+ + A G AV +R+MEQ+G+ + Y + + G W A+ +++ +
Sbjct: 894 SYQSAILACRAGGDGASAVMLLRDMEQQGLEPRDADYNLVIETVGREGDWAGALELLKSM 953
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM 504
K+ + T+ + + G + D ++ + MKD P N+++ V+SR
Sbjct: 954 KAEGIAAD-AYTYGAAVGACAKGRNPDLARALLEEMKDLGLTPTRFCWNSIISVHSRTGN 1012
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
+ A L +E ++ + DE T+S+M+ A W+ + + M
Sbjct: 1013 TTAAMTLMDEMKQS--------------MPCDETTFSAMMHGCAQTRDWDAAGRLLEEMN 1058
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 624
+G + + + LLV A RAG+ L E + + G P +T + ++
Sbjct: 1059 AAGLKPNDACYYTLLVAACRAGELRLAEGLIKGMRKDGAAPDLYSYTTLSAACGRFHDWR 1118
Query: 625 KAVALINAM 633
A+ LI +M
Sbjct: 1119 MALRLIESM 1127
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 120/308 (38%), Gaps = 58/308 (18%)
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
A+Y + QVG + + LI+ M + D PD+V +N + AC
Sbjct: 606 ASYSPALKSAAQVGDWRNAIALIDVMTRASVT----------DKDAGPDVVCFNYAMTAC 655
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + + V +++ GL + +YG+ M+ ++G ++ E + G +
Sbjct: 656 AKAGECELAHRVLSRIQACGLAANLVSYGICMDAYAKAGLWEKALELLAEARSQGLSPNI 715
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+T+ VR CN+ W A ++
Sbjct: 716 VTFTTAVRGL----------------------------------ACND--WDKAEEILSM 739
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRND 503
+KS R KP E+T+T LI G + ++ + ++ PN+ NA + V ++
Sbjct: 740 MKS-RAIKPNEVTYTELISICGRSGDVHQALAQLERARRNGLSPNLINYNACVDVCAKTG 798
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+A L E+ SGD A L PD T++S++ A A A W +++ +
Sbjct: 799 EVDRALALLEQMQ---------TSGDPA-LTPDLVTFNSVINACAKAGDWALTLWLFSEI 848
Query: 564 ALSGCQLD 571
+G + D
Sbjct: 849 KAAGLKAD 856
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 141/357 (39%), Gaps = 31/357 (8%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
+R M Q GL + +++ +G +G W A+ +L +K + + Y +
Sbjct: 914 LLRDMEQQGLEPRDADYNLVIETVGREGDWAGALELLK---SMKAEGIAADAYTYGAAVG 970
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
K P A + M +D L P ++S+ + G + L++ M+Q
Sbjct: 971 ACAKGRNPDLARALLEEM-KDLGLTPTRFCWNSIISVHSRTGNTTAAMTLMDEMKQS--- 1026
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+ D ++A+++ C + W + +++ +GLKP+ A Y +
Sbjct: 1027 -------------MPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLL 1073
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
++G+ L + M K G A +Y L A A+ + +M+ G+
Sbjct: 1074 VAACRAGELRLAEGLIKGMRKDGAAPDLYSYTTLSAACGRFHDWRMALRLIESMKIDGIP 1133
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG---LIISSMDGGHIDD 473
T +Y A C G + A +++E ++ S+ +E+ G +++ GG D
Sbjct: 1134 ATKKIYAA-ALAACGRGEAEIAEILLEMMR----SQGVELDDVGRSHALVAFGRGGRPDK 1188
Query: 474 CISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTFLS 527
+ + +++ PN+ N ++ + D L E RA +G +F S
Sbjct: 1189 ALVLMDDIREKGPPPNLQCFNGAIEACALADDIDGGISLLAEMGRAGIVPNGVSFRS 1245
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 181/421 (42%), Gaps = 39/421 (9%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T ++L LKGLG + A+ DW KD + + V ++++LGK GR A
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAA 193
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK--------------- 293
+FN + ED D+ +Y S+ G +E V + ++M ++
Sbjct: 194 NLFNGLQED-GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNV 252
Query: 294 ------PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
P +I ++ K + PD YN ++ C + VF++++ +G
Sbjct: 253 FGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSH 312
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY ++V +S + + +M +G + +TY L+ A+ +G ++EA+
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M ++G Y L G+ + AM + E++++ KP TF I +
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRN-AGCKPNICTFNAFIKMYGN 431
Query: 468 GGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G D + IF + + C P+I T N +L V+ +N M S+ +F+E RA G+
Sbjct: 432 RGKFVDMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA---GFV- 486
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
P+ T+++++ A + +E VY+ M +G D + + +L +R
Sbjct: 487 ---------PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 586 G 586
G
Sbjct: 538 G 538
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/462 (20%), Positives = 183/462 (39%), Gaps = 71/462 (15%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ Y LL + GK+ RP EA+++ N M E P I Y+S+ + G+L E ++L
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEM-ELNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 288 ERMRQKPSK--------------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+M +K +K N+ + + +P++ +NA +
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + +F ++ GL P T+ + V Q+G V F++M ++G T+
Sbjct: 433 GKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ A+ G +A+ R M GV S Y + L G W+ + V+ +++
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISI------------------------------ 477
R KP E+T+ L+ + +G I S+
Sbjct: 553 GR-CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 478 -----FQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
F +K+ P+I T+N+M+ +Y R M KA E+ + G+T
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLD---YMKERGFT------- 661
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
P TY+S++ + + + E + + + G + D + ++ R +
Sbjct: 662 ---PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
F + ++G +P + + + S +E+A+ ++ M
Sbjct: 719 SRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 156/403 (38%), Gaps = 43/403 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G AM++ + + K ++ + + + + G G+ + ++IF+ +
Sbjct: 390 LLSGFERAGKVESAMNIFEEMRNAGCKPNICT---FNAFIKMYGNRGKFVDMMKIFD-EI 445
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN------------ 300
C L PDI ++++ GQ G+ E+ + + M++ P + N
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 301 -----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
++R+ D + PDL YN VL A W+ V ++ KP+ TY
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + L+H ++ A+ K LV + + EA A +++RG
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII---SSMDGGHID 472
+ + A V++ +K R P T+ L+ S D G +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVGKANEVLDYMKE-RGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 473 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ + + + +P+I + N ++ Y RN A +F E SG
Sbjct: 685 EILR--EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM---RDSG---------- 729
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+ PD TY++ + + A +E V + M GC+ +Q +
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 28/250 (11%)
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+++ +EG+++ A +++ G Y L N+GR+++A+ V +K++
Sbjct: 178 IVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE- 236
Query: 449 RHSKPLEITFTGLI-ISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFS 506
KP IT+ ++ + G + S+ + MK D P+ T N ++ R +
Sbjct: 237 EGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+A ++FEE A S D+ TY+++L+ +H+ + V M L+
Sbjct: 297 EAAQVFEEMKAAGFSH-------------DKVTYNALLDVYGKSHRPKEAMKVLNEMELN 343
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
G + L+ +R G +L+ A + + E G P +T +L S +
Sbjct: 344 GFSPSIVTYNSLISAYARDG---MLDEAMELKNQMAEKGTKPDVFTYTTLL------SGF 394
Query: 624 EKAVALINAM 633
E+A + +AM
Sbjct: 395 ERAGKVESAM 404
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 89/220 (40%), Gaps = 16/220 (7%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ + K EA R F+ L++ PDI +S+ G+ ++ + ++++ M+++
Sbjct: 600 LVLVCSKCDLLPEAERAFS-ELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKER 658
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
P + YN+++ S + + +++ G+KP +Y
Sbjct: 659 G---------------FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ ++ + F +M SG +TY + ++ + EA+ VR M +
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKH 763
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
G + Y + C R +A L VE +++L P
Sbjct: 764 GCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 189/449 (42%), Gaps = 39/449 (8%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T ++L LKGLG + A+ DW KD + + V ++++LGK GR A
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---------------- 292
+FN + ED D+ +Y S+ G +E V + ++M +
Sbjct: 194 NMFNGLQED-GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNV 252
Query: 293 -----KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
P +I ++ K + PD YN ++ C + VF++++ +G
Sbjct: 253 FGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY 312
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY ++V +S + + +M +G + +TY L+ A+ +G ++EA+
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M ++G Y L G+ + AM + E++++ KP TF I +
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN-AGCKPNICTFNAFIKMYGN 431
Query: 468 GGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G + + IF + + C P+I T N +L V+ +N M S+ +F+E RA G+
Sbjct: 432 RGKFTEMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA---GFV- 486
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
P+ T+++++ A + +E VY+ M +G D + + +L +R
Sbjct: 487 ---------PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
G E + + P+ L + +L
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/462 (19%), Positives = 183/462 (39%), Gaps = 71/462 (15%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ Y LL + GK+ RP EA+++ N M+ + P I Y+S+ + G+L E ++L
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMVLN-GFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 288 ERMRQKPSK--------------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+M +K +K ++ + + +P++ +NA +
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + +F ++ GL P T+ + V Q+G V F++M ++G T+
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ A+ G +A+ R M GV S Y + L G W+ + V+ +++
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISI------------------------------ 477
R KP E+T+ L+ + +G I S+
Sbjct: 553 GR-CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 478 -----FQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
F +K+ P+I T+N+M+ +Y R M +KA + + G+T
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLD---YMKERGFT------- 661
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
P TY+S++ + + + E + + + G + D + ++ R +
Sbjct: 662 ---PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
F + +G +P + + + S +E+A+ ++ M
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 155/403 (38%), Gaps = 43/403 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G AMS+ + + K ++ + + + + G G+ E ++IF+ +
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICT---FNAFIKMYGNRGKFTEMMKIFD-EI 445
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN------------ 300
C L PDI ++++ GQ G+ E+ + + M++ P + N
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 301 -----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
++R+ D + PDL YN VL A W+ V ++ KP+ TY
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + L+H ++ A+ K LV + + EA A +++RG
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII---SSMDGGHID 472
+ + A V++ +K R P T+ L+ S D G +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKE-RGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 473 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ + + + +P+I + N ++ Y RN A +F E +
Sbjct: 685 EILR--EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG------------- 729
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+ PD TY++ + + A +E V + M GC+ +Q +
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 113/251 (45%), Gaps = 28/251 (11%)
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+++ +EG+++ A +++ G Y L N+GR+++A+ V +K++
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE- 236
Query: 449 RHSKPLEITFTGLI-ISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFS 506
KP IT+ ++ + G + S+ + MK D P+ T N ++ R +
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+A ++FEE A G+++ D+ TY+++L+ +H+ + V M L+
Sbjct: 297 EAAQVFEEMKAA---GFSY----------DKVTYNALLDVYGKSHRPKEAMKVLNEMVLN 343
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
G + L+ +R G +L+ A + + E G P +T +L S +
Sbjct: 344 GFSPSIVTYNSLISAYARDG---MLDEAMELKNQMAEKGTKPDVFTYTTLL------SGF 394
Query: 624 EKAVALINAMA 634
E+A + +AM+
Sbjct: 395 ERAGKVESAMS 405
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 88/220 (40%), Gaps = 16/220 (7%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ + K EA R F+ L++ PDI +S+ G+ ++ + +++ M+++
Sbjct: 600 LVLVCSKCDLLPEAERAFS-ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
P + YN+++ S + + +++ G+KP +Y
Sbjct: 659 G---------------FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ ++ + F +M SG +TY + ++ + EA+ VR M +
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKH 763
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
G + Y + C R +A L VE +++L P
Sbjct: 764 GCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 200/463 (43%), Gaps = 35/463 (7%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA-ILGKAGRPHEALRIF 251
++ +LK L G +A+ + +W+ ++ +L+A ILG+ + A ++F
Sbjct: 138 LIGVLKALDLSGDCERAILLFEWLVLNLGTGNVNLDNQAVELMARILGRESQHSIASKLF 197
Query: 252 NLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
+++ L+D +L D+ AY ++ + + G + V + E+M + L
Sbjct: 198 DVIPLDDYSL--DVRAYTTILHSYSRCGKYERAVAIFEKMNESG---------------L 240
Query: 311 EPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P LV YN +L+ W + + ++R GL T + + G D
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAK 300
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
EFF + G A G +TY L++ F + G +EA++ ++ ME A Y EL
Sbjct: 301 EFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAY 360
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
G +++ +++ + KP +T+T +I + +D +S++ MK+ C PN
Sbjct: 361 VRAGFYEEGAALIDTMTE-NGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPN 419
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T NA+L + + S+++E+ + G P+ T+++ML
Sbjct: 420 VCTYNAILGMLGKK---SQSEEMMKILCDMKVDG----------CAPNRITWNTMLSMCG 466
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+Y + V++ M G + D+ L+ + R G E +D +LEAG P
Sbjct: 467 NKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVA 526
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+ +L + ++ A ++I M F +E ++ + S
Sbjct: 527 TYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNS 569
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/481 (20%), Positives = 181/481 (37%), Gaps = 74/481 (15%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL F E ++ G +G +A ++ GLK + Y LL + GK
Sbjct: 271 MRSKGLGFDEFTCSTVISACGREGLLDEAK---EFFVGLKSQGYAPGTVTYNALLQVFGK 327
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSK- 296
AG EAL I M ED N PD Y+ + + G +E LI+ M + KP+
Sbjct: 328 AGIYSEALSIMKEM-EDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAV 386
Query: 297 ----------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ +++ + + P++ YNA+L Q + + + +
Sbjct: 387 TYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDM 446
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ G P+ T+ + + G + V F++M G T+ L+ A G
Sbjct: 447 KVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSD 506
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+A M + G + + Y L L G W+ A V++ +K+ + KP E +++
Sbjct: 507 IDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKN-KGFKPSETSYSL 565
Query: 461 LIISSMDGGHIDDCISI-----------------------------------FQHMKDHC 485
++ S GG++ I FQ ++ H
Sbjct: 566 ILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHG 625
Query: 486 -EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+P++ N+ML ++SR +M +A E+ L+PD TY+S++
Sbjct: 626 YKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECG-------------LQPDLVTYNSLM 672
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ A + E + + + SG + D + ++ R G H ++ G
Sbjct: 673 DLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIR 732
Query: 605 P 605
P
Sbjct: 733 P 733
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 135/349 (38%), Gaps = 30/349 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+L G+KG + V + G + RD + L+ G+ G +A +I++
Sbjct: 461 MLSMCGNKGMHKYVKRVFQEMKSCGFEPDRD-----TFNTLITASGRCGSDIDAEKIYDE 515
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS--------------- 295
MLE P +A Y+++ L + G + +I+ M+ K PS
Sbjct: 516 MLE-AGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGG 574
Query: 296 --KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K I + + +D + P ++ ++ A G+ F+ L+K G KP +
Sbjct: 575 YVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFN 634
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + + +D HE + + G +TY L+ + G+ +A +R ++
Sbjct: 635 SMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNS 694
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G Y + C G +A+ + ++ S R +P +T+ + G +
Sbjct: 695 GDKSDLISYNTVIKGFCRQGLMHEALRTLSEMIS-RGIRPCIVTYNTFVGGYAAKGMFAE 753
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
+ +M H C PN T ++ Y + F +A + T + S
Sbjct: 754 IDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVSTITDIDDS 802
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 198/444 (44%), Gaps = 37/444 (8%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
+L ++KGLG A+ V +WV K+ L + + +++ILGK GR A + +
Sbjct: 130 VLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLH 189
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS----KRIKNMHRK- 304
+ +D D+ AY S+ G +E V + ++M + KP+ I N++ K
Sbjct: 190 NLCKD-GFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKM 248
Query: 305 --NWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
W+ + + PD YN +++ C + ++ V K+++ +G P T
Sbjct: 249 GMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVT 308
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y ++V +S + E ++M +G +TY L+ A+ +G + +A+ M
Sbjct: 309 YNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMV 368
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
++G+ Y L G+ + A+ + E++++ KP TF LI + G
Sbjct: 369 EKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRN-EGCKPNICTFNALIKMHGNRGKF 427
Query: 472 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ + +F+ +K C P+I T N +L V+ +N M S+ +F+E RA G+
Sbjct: 428 TEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRA---GFV------ 478
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
P+ T+++++ + + ++ VYK M +G D + + +L +R G
Sbjct: 479 ----PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQ 534
Query: 591 LEHAFDSLLEAGEIPHPLFFTEML 614
E + + P+ L + +L
Sbjct: 535 SEKVLAEMKDGRCKPNELTYCSLL 558
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 134/578 (23%), Positives = 227/578 (39%), Gaps = 68/578 (11%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+++VR +S L+ + ++ LG G A S+L + KD D+ + YT +
Sbjct: 150 FEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNL--CKDGFDVDV-YAYTSM 206
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIERMRQK 293
+ GR EA+ +F M E+ P + Y+ + G++G+ ++V L++RM+
Sbjct: 207 ITAFTSNGRYREAVMVFKKM-EEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSA 265
Query: 294 -------------PSKRIKNMHRKNWDPVLE-------PDLVVYNAVLNACVPSHQWKGV 333
R N++ + + E PD V YNA+L+ S + K
Sbjct: 266 GIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEA 325
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
V +++ +G PS TY + + G + E +M + G TY L+
Sbjct: 326 MEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSG 385
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
F + GK AV M G + L N G++ + M V E IK+ + S P
Sbjct: 386 FEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCS-P 444
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKA---- 508
+T+ L+ G + +F+ MK P T N ++ YSR F +A
Sbjct: 445 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVY 504
Query: 509 KELFEETTRANSSGYTFLSG-------------------DGAPLKPDEYTYSSMLEASAT 549
K + E + S Y + DG KP+E TY S+L A A
Sbjct: 505 KRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGR-CKPNELTYCSLLHAYAN 563
Query: 550 AHQWEYF----EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL---EHAFDSLLEAG 602
+ E E +Y G+ L +T +LV + KC LL E AF L + G
Sbjct: 564 GKEIERMCALAEEIYSGIIEPRAVLLKT---LVLVNS----KCDLLMETERAFLELRQRG 616
Query: 603 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLE 662
P M+ + KA +++ M F + + L + ++ E
Sbjct: 617 FSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSE 676
Query: 663 KLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLS 700
++L + A + + + ++A CR+ + RD S
Sbjct: 677 EILREIL---AKGIRPDIISYNTVIYAYCRNGRMRDAS 711
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 189/474 (39%), Gaps = 69/474 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G ++AM VL + G S Y L++ + G +AL + N M+
Sbjct: 312 LLDVYGKSRRSKEAMEVLQEMEG---NGCPPSIVTYNSLISAYARDGLLEDALELKNQMV 368
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + PD+ Y ++ + G K V++ E MR + K P++
Sbjct: 369 EK-GIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCK---------------PNIC 412
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+NA++ ++ + VF+ ++ P T+ + V Q+G V F++M
Sbjct: 413 TFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEM 472
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
++G T+ L+ ++ G ++A+A + M + GV S Y + L G W
Sbjct: 473 KRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLW 532
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-------------- 481
+ + V+ ++K R KP E+T+ L+ + +G I+ ++ + +
Sbjct: 533 KQSEKVLAEMKDGR-CKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKT 591
Query: 482 ----KDHCE------------------PNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
C+ P+I T+NAM+ +Y R M +KA E+ + R
Sbjct: 592 LVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRG- 650
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
G+T P TY+S++ + + +E E + + + G + D + ++
Sbjct: 651 --GFT----------PSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVI 698
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
R G+ + E+G P + + + S + +A+ ++ M
Sbjct: 699 YAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYM 752
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 17/225 (7%)
Query: 225 LKSRFVYTKLLAILG-KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
++ R V K L ++ K E R F L L PDI +++ G+
Sbjct: 582 IEPRAVLLKTLVLVNSKCDLLMETERAF-LELRQRGFSPDITTLNAMVSIYGR------- 633
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+M K ++ + M R + P L YN+++ S ++ + +++
Sbjct: 634 ----RQMVAKANEILDCMKRGGF----TPSLTTYNSLMYMYSRSANFERSEEILREILAK 685
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G++P +Y + ++G+ +M +SG A +TY + ++ + EA
Sbjct: 686 GIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEA 745
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ V M + G S Y + C R +A + V ++ L
Sbjct: 746 IDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKL 790
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 196/461 (42%), Gaps = 43/461 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLK L G W A+++L W G + D + ++ LG+ G+ H+A+ +L
Sbjct: 109 LLKALELSGHWEWALALLRWA-GAEGAADASA---LEMVVRALGREGQ-HDAV---CALL 160
Query: 256 EDCNLYP----DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
++ L P D+ AY +V L + G + V+L +R++ +
Sbjct: 161 DEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQG---------------VA 205
Query: 312 PDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P LV YN VL+ W + + ++R +G++P T + + G D
Sbjct: 206 PTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVA 265
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
FF + G +TY L++ F + G EA+ ++ MEQ G A Y ELA
Sbjct: 266 FFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYA 325
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
G +++A ++ + S + P T+ ++ + + G +D+ +++F M K C PN+
Sbjct: 326 RAGFYEEAAKCLDTMTS-KGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNV 384
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N +L + + F+ E+ E +R+ + P+ T+++ML
Sbjct: 385 NTYNFILGMLGKKSRFTVMLEMLGEMSRSGCT-------------PNRVTWNTMLAVCGK 431
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+Y V +GM G +L + + L+ R G ++ + AG P
Sbjct: 432 RGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTT 491
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
+ +L Q ++ A ++++ M F ++ ++ L +
Sbjct: 492 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQ 532
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 192/487 (39%), Gaps = 52/487 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++ LG +G ++LD + L L R YT +L L +AGR A+ +F L
Sbjct: 143 VVRALGREGQHDAVCALLDEM-PLPPGSRLDVR-AYTTVLHALSRAGRYERAVELFA-EL 199
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLIERMRQ--------KPSKRIKNMHRKNW 306
+ P + Y+ V G++G +V L++ MR S I R
Sbjct: 200 RRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGL 259
Query: 307 -DPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
D + P +V YNA+L + + V K++ + G +P A TY
Sbjct: 260 VDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNE 319
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++G Y+ + M G A TY ++ A+ GK++EA+A M++ G
Sbjct: 320 LAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSG 379
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
V + Y + L R+ ML + S P +T+ ++ G D
Sbjct: 380 CVPNVNTYNFILGMLGKKSRFT-VMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYV 438
Query: 475 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+ + MK E + T N ++ Y R + A +++ E T S+G+
Sbjct: 439 TRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMT---SAGFA--------- 486
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
P TY+++L + W + + M G + + ++ LL ++ G ++
Sbjct: 487 -PCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGID- 544
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNY--------EKAVALINAMAYAPFHITERQW 645
A + + G + F + ++++ +V +N+ EKA + A Y P +
Sbjct: 545 AIEKEVYGGTV----FPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSM 600
Query: 646 TELFESN 652
++ N
Sbjct: 601 LSMYAKN 607
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 140/353 (39%), Gaps = 35/353 (9%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + +A LD + K L + F Y ++ G G+ EAL +F+ M + P+
Sbjct: 328 GFYEEAAKCLD---TMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQM-KKSGCVPN 383
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y+ + LG +G ++E + + M R P+ V +N +L
Sbjct: 384 VNTYNFI---LGMLGKKSRFTVMLEMLGE--------MSRSG----CTPNRVTWNTMLAV 428
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
C V V + ++ G++ S TY + + G + + +M +G A
Sbjct: 429 CGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPC 488
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
TY L+ +G + A + V M +G Y L C G + +E
Sbjct: 489 LTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIA-GIDAIE 547
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRN 502
K P + L+I++ + FQ +K P++ N+ML +Y++N
Sbjct: 548 KEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKN 607
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA-TAHQWE 554
M+SK E+F+ ++ L PD TY+S+++ A + WE
Sbjct: 608 GMYSKVTEIFDSIKQSG-------------LSPDLITYNSLMDMYAKCSESWE 647
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/395 (19%), Positives = 149/395 (37%), Gaps = 74/395 (18%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M++SG +L G +G VL+ G+K SR Y L+A G+
Sbjct: 410 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLE---GMKSCGVELSRDTYNTLIAAYGR 466
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR--- 297
G A +++N M P + Y+++ L + G ++ +MR K K
Sbjct: 467 CGSRTNAFKMYNEM-TSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQ 525
Query: 298 -----------------IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
I + ++ + + P V+ ++ A + G+ F+++
Sbjct: 526 SYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEV 585
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ G P + + + ++G Y V E F + +SG + +TY L+ + K
Sbjct: 586 KARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMY---AKC 642
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+E+ W+ A ++ ++KS KP +++
Sbjct: 643 SES-------------------------------WE-AEKILNQLKS-SQVKPDVVSYNT 669
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+I G I + I M D P + T + ++ Y+ +MFS+A+E+ + N
Sbjct: 670 VINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHN 729
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
LKP E TY ++++ A ++E
Sbjct: 730 -------------LKPMELTYRRVVDSYCKAKRFE 751
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PDLV++N++L+ + + V +F +++SGL P TY M++ + + +
Sbjct: 592 PDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKI 651
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
++ S ++Y ++ F ++G I EA + M G+ Y+ L +
Sbjct: 652 LNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYAS 711
Query: 432 NGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
+ +A V+ + ++H+ KP+E+T+ ++ S ++ S + + +PN
Sbjct: 712 LEMFSEAREVINYM--IQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSET-DPNF 767
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 197/444 (44%), Gaps = 37/444 (8%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
+L ++KGLG AMSV WV +D + + V ++ +LGK G+ A I N
Sbjct: 147 VLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILN 206
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS----KRIKNMHRK- 304
+ +D D+ AY S+ G ++ V + ++M + KP+ I N++ K
Sbjct: 207 NLRKD-GFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKM 265
Query: 305 --NWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
W + + PD YN +++ C ++ VF++++ SG P T
Sbjct: 266 GMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVT 325
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
+ ++V +S + E ++M SG + +TY L+ A+ +G + EA+ M
Sbjct: 326 FNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMV 385
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
++G+ Y L G + AM + ++++ KP TF LI + G
Sbjct: 386 EKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRA-AGCKPNICTFNALIKMHGNRGRF 444
Query: 472 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ + +F+ ++ +C P+I T N +L V+ +N M S+ +F+E RA G+
Sbjct: 445 AEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA---GFV------ 495
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
P+ T+++++ A + ++ VYK M +G D + + +L +R G
Sbjct: 496 ----PERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQ 551
Query: 591 LEHAFDSLLEAGEIPHPLFFTEML 614
E F + + P+ L + +L
Sbjct: 552 SEKVFAEMKDGRCKPNELTYCSLL 575
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/438 (21%), Positives = 177/438 (40%), Gaps = 33/438 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G R+AM + D + K D+ F YT LL+ KAG A+RIF M
Sbjct: 364 LISAYARDGLLREAMELKDQMVEKGIKPDV---FTYTTLLSGFEKAGMDEPAMRIFGEM- 419
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P+I ++++ G G E++K+ E + I N PD+V
Sbjct: 420 RAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIE------ICN---------CAPDIV 464
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N +L + V VFK+++++G P T+ + + G + +++M
Sbjct: 465 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRM 524
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
++G +Y ++ A G ++ M+ Y L N+
Sbjct: 525 LEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEI 584
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAM 495
+ + E+I S ++P+ + L++ + + + F+ +K P++ T+NAM
Sbjct: 585 ERMHTLAEEIYS-GLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAM 643
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
+ +Y R M +KA E+ N SG++ P TY+S++ + + +E
Sbjct: 644 IAIYGRRQMVAKANEIL---NFMNESGFS----------PSLATYNSLMYMHSRSENFER 690
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
E V K + G + D + ++ R G+ F + G +P + + +
Sbjct: 691 SEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVA 750
Query: 616 QAIVQSNYEKAVALINAM 633
S +E A+ ++ M
Sbjct: 751 SYAADSLFEDAIGVVRYM 768
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/462 (18%), Positives = 167/462 (36%), Gaps = 118/462 (25%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ + LL + GK+ RP EA+ + M E P I Y+S+ + GLL+E ++L
Sbjct: 323 KVTFNTLLDVYGKSRRPKEAMEVLKEM-EFSGFSPSIVTYNSLISAYARDGLLREAMELK 381
Query: 288 ERMRQK-----------------------PSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
++M +K P+ RI R +P++ +NA++
Sbjct: 382 DQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAG---CKPNICTFNALIKMH 438
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
++ + VF+++ P T+ + V Q+G V F++M ++G
Sbjct: 439 GNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 498
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
T+ L+ A+ G +A+A + M + GV S Y + L G W+ + V +
Sbjct: 499 DTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAE 558
Query: 445 IK------------SLRH----------------------SKPLEITFTGLIISSMDGGH 470
+K SL H ++P+ + L++ +
Sbjct: 559 MKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDL 618
Query: 471 IDDCISIFQHMKDHCEPNIGTVNAMLKVY------------------------------- 499
+ + F+ +K P++ T+NAM+ +Y
Sbjct: 619 LMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSL 678
Query: 500 ----SRNDMFSKAKELFEE----------------------TTRANSSGYTFLSGDGAPL 533
SR++ F +++E+ +E R + F L
Sbjct: 679 MYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGL 738
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
PD TY++ + + A +E V + M GC+ +Q +
Sbjct: 739 VPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTY 780
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 56/139 (40%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P L YN+++ S ++ V K++ GLKP +Y + ++G+
Sbjct: 668 FSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDAS 727
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F M G +TY V ++ + +A+ VR M + G + Y +
Sbjct: 728 RIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGY 787
Query: 430 CNNGRWQDAMLVVEKIKSL 448
C + R DA++ V + L
Sbjct: 788 CKHSRRADAIMFVSSLNQL 806
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+K+ + + ++ R+M AK + + MN+SG + L+ ++
Sbjct: 630 KKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFE 689
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
++ VL + K DL S Y ++ + GR +A RIF+ M + L PD+ Y
Sbjct: 690 RSEEVLKEILAKGLKPDLIS---YNTVIFAYCRNGRMKDASRIFSYM-KTYGLVPDVITY 745
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE----PDLVVYNAVLNA 323
++ + L ++ + ++ M + KR +N + D + D +++ + LN
Sbjct: 746 NTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQ 805
Query: 324 CVP 326
P
Sbjct: 806 LDP 808
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 195/428 (45%), Gaps = 41/428 (9%)
Query: 185 GLMFTEGQ----MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
GL FT +L ++KGL A+ V +V +D + S V ++++LGK
Sbjct: 138 GLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNREDFASILSNSVVAVIISVLGK 197
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS-- 295
GR A + + + D ++ DI AY S+ G +E V + +++ + +P+
Sbjct: 198 EGRASFAASLLHDLRND-GVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLI 256
Query: 296 --KRIKNMHRK---NWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
I N++ K W + + PDL YN ++++C ++ VF++
Sbjct: 257 TYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEE 316
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ +G P TY ++V +S + E ++M SG A +TY L+ A+ +G
Sbjct: 317 MKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGL 376
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
++EA+ M ++G+ Y L G+ AM V E+++ + +P TF
Sbjct: 377 LDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR-VAGCQPNICTFN 435
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI + G+ + + +F+ +K C P+I T N +L V+ +N M S+ +F+E RA
Sbjct: 436 ALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 495
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
G+ P+ T+++++ A + ++ +Y+ M +G D + + +
Sbjct: 496 ---GFV----------PERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAV 542
Query: 579 LVEASRAG 586
L +R G
Sbjct: 543 LAALARGG 550
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 160/409 (39%), Gaps = 37/409 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F YT LL+ K G+ A+++F M + C P+I ++++ G G E++K+
Sbjct: 397 FTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQ--PNICTFNALIKMHGNRGNFVEMMKVF 454
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLE--PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
E ++ + E PD+V +N +L + V VFK+++++G
Sbjct: 455 EEIK-----------------ICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 497
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P T+ + + G +D +R+M +G TY ++ A G ++
Sbjct: 498 VPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEK 557
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M+ Y L N + + E+I S +P + L++
Sbjct: 558 VLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYS-GIIEPQAVLLKTLVLVY 616
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ + F +++ P+I T+NAM+ +Y R M SK E+ SG+T
Sbjct: 617 SKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEIL---NFIKDSGFT 673
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
P TY+S++ + +E E + + + G + D ++ R
Sbjct: 674 ----------PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCR 723
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G+ F + + G P + + + S + +A+ ++ M
Sbjct: 724 NGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYM 772
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 195/428 (45%), Gaps = 41/428 (9%)
Query: 185 GLMFTEGQ----MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
GL FT +L ++KGL A+ V +V +D + S V ++++LGK
Sbjct: 138 GLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNREDFASILSNSVVAVIISVLGK 197
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS-- 295
GR A + + + D ++ DI AY S+ G +E V + +++ + +P+
Sbjct: 198 EGRASFAASLLHDLRND-GVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLI 256
Query: 296 --KRIKNMHRK---NWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
I N++ K W + + PDL YN ++++C ++ VF++
Sbjct: 257 TYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEE 316
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ +G P TY ++V +S + E ++M SG A +TY L+ A+ +G
Sbjct: 317 MKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGL 376
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
++EA+ M ++G+ Y L G+ AM V E+++ + +P TF
Sbjct: 377 LDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR-VAGCQPNICTFN 435
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI + G+ + + +F+ +K C P+I T N +L V+ +N M S+ +F+E RA
Sbjct: 436 ALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 495
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
G+ P+ T+++++ A + ++ +Y+ M +G D + + +
Sbjct: 496 ---GFV----------PERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAV 542
Query: 579 LVEASRAG 586
L +R G
Sbjct: 543 LAALARGG 550
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 160/409 (39%), Gaps = 37/409 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F YT LL+ K G+ A+++F M + C P+I ++++ G G E++K+
Sbjct: 397 FTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQ--PNICTFNALIKMHGNRGNFVEMMKVF 454
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLE--PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
E ++ + E PD+V +N +L + V VFK+++++G
Sbjct: 455 EEIK-----------------ICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 497
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P T+ + + G +D +R+M +G TY ++ A G ++
Sbjct: 498 VPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEK 557
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M+ Y L N + + E+I S +P + L++
Sbjct: 558 VLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYS-GIIEPQAVLLKTLVLVY 616
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ + F +++ P+I T+NAM+ +Y R M SK E+ SG+T
Sbjct: 617 SKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEIL---NFIKDSGFT 673
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
P TY+S++ + +E E + + + G + D ++ R
Sbjct: 674 ----------PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCR 723
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G+ F + + G P + + + S + +A+ ++ M
Sbjct: 724 NGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYM 772
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 16/218 (7%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ + K+ E R F L L + PDI +++ G+ RM K
Sbjct: 612 LVLVYSKSDLLTETERAF-LELREQGFSPDITTLNAMVSIYGR-----------RRMVSK 659
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ I N + D P L YN+++ + ++ + +++ G+KP ++
Sbjct: 660 -TNEILNFIK---DSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFN 715
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ ++G+ F +M G A +TY + ++ + EA+ V+ M +
Sbjct: 716 TVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKN 775
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
G + Y L C R +A + +++L S
Sbjct: 776 GCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRNLDPS 813
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 196/466 (42%), Gaps = 47/466 (10%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
+ LLK L G W A+++L W G D L+ ++ LG+ G+ H+A+
Sbjct: 107 ITSLLKALELSGHWEWALALLRWAGKEGAADASALE------MVVRALGREGQ-HDAV-- 157
Query: 251 FNLMLEDCNLYP----DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
+L++ L P D+ AY +V L + G + ++L +R++
Sbjct: 158 -CALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQG------------ 204
Query: 307 DPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
+ P LV YN VL+ W + + ++R +G++P T + + G
Sbjct: 205 ---VAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLV 261
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
D FF + G A +TY L++ F + G EA+ + MEQ G A Y EL
Sbjct: 262 DEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNEL 321
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDH 484
A G +++A ++ + S + P T+ ++ + + G +D+ +++F M K
Sbjct: 322 AGTYARAGFFEEAARCLDTMAS-KGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTG 380
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
PN+ T N +L + + F+ E+ E +R+ + P+ T+++ML
Sbjct: 381 FVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCT-------------PNRVTWNTML 427
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+Y V +GM G +L + + L+ R G ++ + AG
Sbjct: 428 AVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFT 487
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
P + +L Q ++ A ++++ M F E+ ++ L +
Sbjct: 488 PCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQ 533
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 155/382 (40%), Gaps = 41/382 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
LL+ G G++ +A+ VL G ++ + V Y +L +AG EA R + M
Sbjct: 286 LLQVFGKAGNYTEALRVL----GEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM 341
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKN 305
L P+ Y++V G VG + E + L ++M++ P+ N+ +
Sbjct: 342 ASK-GLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSR 400
Query: 306 WDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ +LE P+ V +N +L C V V + +R G++ S TY
Sbjct: 401 FTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNT 460
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + G + + +M +G TY L+ +G + A + V M +G
Sbjct: 461 LIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKG 520
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
Y L C G + ++ P + L+I++ +D
Sbjct: 521 FKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGM 580
Query: 475 ISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+ FQ +K P++ N+ML +Y++N M+SKA E+F+ R+ L
Sbjct: 581 ETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSG-------------L 627
Query: 534 KPDEYTYSSMLEASA-TAHQWE 554
PD TY+S+++ A + WE
Sbjct: 628 SPDLITYNSLMDMYAKCSESWE 649
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/437 (19%), Positives = 162/437 (37%), Gaps = 86/437 (19%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL+ ++ G+ G +A+++ D +K + + Y +L +LGK
Sbjct: 341 MASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQ---MKKTGFVPNVNTYNLVLGMLGK 397
Query: 241 AGRPHEALRIFNLMLE------DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ-- 292
R F +MLE P+ ++++ G+ G+ + +++E MR
Sbjct: 398 KSR-------FTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCG 450
Query: 293 -KPSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ S+ N M+ + P + YNA+LN W
Sbjct: 451 VELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQ 510
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA-LTYKVLVRA 393
+ ++R G KP+ +Y L ++ + G + ++ SG + + + LV A
Sbjct: 511 SIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIA 570
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK------- 446
++ +++ A + ++ RG ++ + NG + A V + IK
Sbjct: 571 NFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPD 630
Query: 447 -------------------------SLRHS---KPLEITFTGLIISSMDGGHIDDCISIF 478
L+ S KP +++ +I G + + +
Sbjct: 631 LITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVL 690
Query: 479 QHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
M D P T + ++ YS +MFS+A+E+ GY G LKP E
Sbjct: 691 SEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVI---------GYMVQHG----LKPME 737
Query: 538 YTYSSMLEASATAHQWE 554
TY ++E+ A ++E
Sbjct: 738 LTYRRVVESYCRAKRFE 754
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/382 (18%), Positives = 150/382 (39%), Gaps = 25/382 (6%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV--MLQSGK 364
D +L D+ ++L A S W+ W LR +G + +A L M V + + G+
Sbjct: 100 DELLRADI---TSLLKALELSGHWE---WALALLRWAGKEGAADASALEMVVRALGREGQ 153
Query: 365 YDLVHEFFRKMA-KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
+D V + G + Y ++ A G+ A+ + ++GV T Y
Sbjct: 154 HDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYN 213
Query: 424 ELACCLCNNGR-WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
+ GR W + +++++++ +P T + +I + G +D+ ++ F+ +K
Sbjct: 214 VVLDVYGRMGRSWPRIVALLDEMRAA-GVEPDGFTASTVIAACCRDGLVDEAVAFFEDLK 272
Query: 483 DHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
P + T NA+L+V+ + +++A + E + +PD TY+
Sbjct: 273 ARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGC-------------QPDAVTYN 319
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
+ A A +E MA G + + ++ GK FD + +
Sbjct: 320 ELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKT 379
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL 661
G +P+ + +L +S + + ++ M+ + W + R D +
Sbjct: 380 GFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYV 439
Query: 662 EKLLNALCNCNAASSEITVSNL 683
++L + +C S T + L
Sbjct: 440 TRVLEGMRSCGVELSRDTYNTL 461
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 183/433 (42%), Gaps = 43/433 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y +L L A + +A + M+ + N +P+ + + + Q GLL V+L+E
Sbjct: 211 YTYNTVLKGLCGAKQWEKAEELMEEMIRN-NCHPNEVTFATQIRSFCQNGLLDHAVQLLE 269
Query: 289 RMRQ---KPSKRIKNMHRKNWDP--------------VLEPDLVVYNAVLNACVPSHQWK 331
RM + P I + + + +P+ V YNA L + +WK
Sbjct: 270 RMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCKPNTVCYNAALKGLCMAERWK 329
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
V + ++ + P+ AT+ + + Q G D E +M K G + Y L+
Sbjct: 330 DVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLI 389
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRH 450
F E+G++++A+ + +M + ++ + A LC RW D ++ ++ LR
Sbjct: 390 NYFSEQGRVDDALMLLDSM----LCNPDTISFNAALKALCRTERWYDVEELIAQM--LRE 443
Query: 451 SKPL-EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 508
PL E+TF LI S G ++ I +F+ M K C P+I T ++++ +S + A
Sbjct: 444 DCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESA 503
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
ELF+ P KPD ++Y+++L+ A +WE + MA C
Sbjct: 504 IELFQSM----------------PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDC 547
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
++ L+ + G F + E G P + ++ Q + A+
Sbjct: 548 PPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALN 607
Query: 629 LINAMAYAPFHIT 641
L++ M+ P I+
Sbjct: 608 LLSTMSCKPDAIS 620
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 144/346 (41%), Gaps = 40/346 (11%)
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM----- 301
I ++ +DC P+ A + + L Q GL+ ++++E+M++ +P I N
Sbjct: 335 IAEMVRKDCP--PNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYF 392
Query: 302 -HRKNWDPVL--------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ D L PD + +NA L A + +W V + Q+ + T+
Sbjct: 393 SEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTF 452
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ ++ + Q G + E F +M K +TY L+ F E+G + A+ ++M
Sbjct: 453 NILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPC 512
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+ + + Y + LC RW+DA ++ + + + P EITF LI S G D
Sbjct: 513 KPDIFS---YNAVLKGLCRAARWEDAGELIANM-ARKDCPPNEITFNILINSLCQKGFAD 568
Query: 473 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
I +F+ M ++ P+I T NA++ +S A L +
Sbjct: 569 RAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMS--------------- 613
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
KPD +Y+S L+ A +W+ E + M C ++ +
Sbjct: 614 -CKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFKY 658
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 134/334 (40%), Gaps = 31/334 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN VL + QW+ + +++ ++ P+ T+ + Q+G D
Sbjct: 206 VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAV 265
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-C 428
+ +M + G + Y LV F E+G++++A+ + M + +V Y A
Sbjct: 266 QLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTM----LCKPNTVCYNAALKG 321
Query: 429 LCNNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
LC RW+D L+ E ++ + P E TF+ L G +D + + + M+ + C
Sbjct: 322 LCMAERWKDVGELIAEMVR--KDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCR 379
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ N ++ +S A L D PD ++++ L+A
Sbjct: 380 PDVVIYNTLINYFSEQGRVDDALMLL----------------DSMLCNPDTISFNAALKA 423
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGE 603
+W E + M C L + L+ + G L+ HA F+ + +
Sbjct: 424 LCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHG---LVNHAIEVFEQMPKYRC 480
Query: 604 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
P + ++ ++ Q E A+ L +M P
Sbjct: 481 TPDIVTYSSLINGFSEQGLVESAIELFQSMPCKP 514
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 23/230 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ L+ L + G + A+ +F M + PDI Y S+ + GL++ ++L +
Sbjct: 450 MTFNILIDSLCQHGLVNHAIEVFEQMPKY-RCTPDIVTYSSLINGFSEQGLVESAIELFQ 508
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M P K PD+ YNAVL + +W+ + + + P+
Sbjct: 509 SM---PCK---------------PDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPN 550
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ + + + Q G D E F++M + G TY L+ F E+G++++A+ +
Sbjct: 551 EITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLS 610
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
M + A Y LC RW++A +V ++ + P E+TF
Sbjct: 611 TMSCK---PDAISYNSTLKGLCRAERWKEAEEIVAEMLR-KKCPPNEVTF 656
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/348 (18%), Positives = 133/348 (38%), Gaps = 68/348 (19%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
E L L G AM V++ + + D+ +Y L+ + GR +AL
Sbjct: 347 EATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDV---VIYNTLINYFSEQGRVDDALM 403
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+ + ML CN PD ++++ L + ++ +LI +M ++ I+ D +
Sbjct: 404 LLDSML--CN--PDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSL 459
Query: 310 LE--------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ PD+V Y++++N + +F+ + KP
Sbjct: 460 CQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM---PCKPDI 516
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+Y ++ + ++ +++ E MA+ +T+ +L+ + ++G + A+ +
Sbjct: 517 FSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQ 576
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + G S P T+ LI + G
Sbjct: 577 MPEYG------------------------------------STPDIFTYNALINGFSEQG 600
Query: 470 HIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
+DD +++ M C+P+ + N+ LK R + + +A+E+ E R
Sbjct: 601 RLDDALNLLSTMS--CKPDAISYNSTLKGLCRAERWKEAEEIVAEMLR 646
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 24/212 (11%)
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 488
LC + R DA V++ +K + ++ L+ G + D + + K N
Sbjct: 120 LCAHRRLADAERVLDALKESGSAD--AVSHNTLVAGYCRDGRLADAERVLEAAKVSGAAN 177
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T A++ Y R+ + A L P+ PD YTY+++L+
Sbjct: 178 VVTYTALINGYCRSGRLADALNLIASM----------------PVAPDTYTYNTVLKGLC 221
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIP 605
A QWE E + + M + C ++ A + + G LL+HA + + G P
Sbjct: 222 GAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNG---LLDHAVQLLERMPRYGCTP 278
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
+ ++ ++ Q + A+ L+N M P
Sbjct: 279 DVVIYSTLVNGFSEQGRVDDALVLLNTMLCKP 310
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 101/269 (37%), Gaps = 26/269 (9%)
Query: 93 FRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNV-EWHPEKRW 151
+ L + + + L + LRE + E N ++D Q G A V E P+ R
Sbjct: 421 LKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRC 480
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
+ L++ SE+ + + + M +F+ +LKGL W A
Sbjct: 481 TPDIVTYSSLINGFSEQGLVESAIELFQSMPCKPDIFSYN---AVLKGLCRAARWEDAG- 536
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+ + + K + + L+ L + G A+ +F M E PDI Y+++
Sbjct: 537 --ELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEY-GSTPDIFTYNALI 593
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
+ G L + + L+ M KP D + YN+ L + +WK
Sbjct: 594 NGFSEQGRLDDALNLLSTMSCKP------------------DAISYNSTLKGLCRAERWK 635
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+ ++ + P+ T+ A ++ +
Sbjct: 636 EAEEIVAEMLRKKCPPNEVTFKYANQLFI 664
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 198/463 (42%), Gaps = 35/463 (7%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDW-VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
++ LLK L G+W +A+ + +W V L + R ++ ILG+ + A ++F
Sbjct: 151 LISLLKALDYSGNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLF 210
Query: 252 NLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
+++ L+D L D+ AY ++ + G +++ ERM + L
Sbjct: 211 DVIPLDDYVL--DVRAYTTILHAYSRTGKYHRAIEIFERMNESG---------------L 253
Query: 311 EPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P LV YN +L+ W + + ++R GL T + + G D
Sbjct: 254 SPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAR 313
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
EFF + G G +TY L+ F + G +EA++ + ME+ A Y E+
Sbjct: 314 EFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAY 373
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPN 488
G ++ +V++ + S + P +T+T +I + G ID + +F Q M+ C PN
Sbjct: 374 VRAGFHEEGAVVIDAMAS-KGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPN 432
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T NA+L + + K L EE + G+ L+G P+ T+++ML
Sbjct: 433 VATYNAVLGMLGK-------KSLSEEMMKI--LGHMKLNG----CSPNHITWNTMLAMCG 479
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+Y V++ M G + D+ L+ R G + + +++AG P
Sbjct: 480 KKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCIN 539
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+ +L + +++ A ++I M F +E ++ + S
Sbjct: 540 TYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHS 582
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/288 (17%), Positives = 114/288 (39%), Gaps = 20/288 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L +G W+ A SV + +++K S Y+ ++ K G + + + +
Sbjct: 544 LLNALARRGDWKAAESV---ILDMRNKGFRPSETSYSLMVHSYAKGGNV-KGIEMIEKSI 599
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D +++P ++ + + L + + + +++ K PDLV
Sbjct: 600 YDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYK---------------PDLV 644
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+ N++L+ ++ + + + + +GL+P T+ M++ + G E R +
Sbjct: 645 LCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRML 704
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
SG ++Y +++ F +G + E + + M GV Y G +
Sbjct: 705 QTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMF 764
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
+ V+ + + + +P E+T+ + D+ I +KD
Sbjct: 765 TEINDVISYM-IVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKD 811
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 73/418 (17%), Positives = 154/418 (36%), Gaps = 43/418 (10%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M G+M ++ G G +A+ + D + L ++ + Y +L +LGK
Sbjct: 389 MASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVAT---YNAVLGMLGK 445
Query: 241 AGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSK 296
E ++I M L C+ P+ ++++ G+ G+ K + ++ M+ +P +
Sbjct: 446 KSLSEEMMKILGHMKLNGCS--PNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDR 503
Query: 297 RIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
N MH + P + YNA+LNA WK V
Sbjct: 504 DTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILD 563
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA-LTYKVLVRAFWEEG 398
+R G +PS +Y L + + G + E K G+ + + + LV A ++
Sbjct: 564 MRNKGFRPSETSYSLMVHSYAKGGNVKGI-EMIEKSIYDGDIFPSWMLLRTLVLANFKCR 622
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+ A + +++ G + + N + A ++ I +P +T
Sbjct: 623 SLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHD-AGLQPDLVTH 681
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
L+ GG + + ++ +P++ + N ++K + R + + + E T
Sbjct: 682 NSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTS 741
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+ P +TY++ + A + V M + C+ ++ +
Sbjct: 742 IG-------------VGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTY 786
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 193/432 (44%), Gaps = 41/432 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLV+ + E+ + + F + +S L+ T+ ++ L+KGL D G W +A+ + +W+
Sbjct: 117 VLVNSIVEQPLPRLSSFFDSV--KSELLTTD--LVSLVKGLDDSGHWERAVFLFEWLVLS 172
Query: 220 KDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQV 277
+ LK V L+ ILG+ + A ++ + + L+D L D+ AY ++ +
Sbjct: 173 SNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYML--DVRAYTTILHAYSRT 230
Query: 278 GLLKELVKLIERMRQ-KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP-SHQWKGVFW 335
G ++ + L ERM++ PS P LV YN +L+ W+ +
Sbjct: 231 GKYEKAINLFERMKEMGPS----------------PTLVTYNVILDVFGKMGRSWRKILG 274
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V +++R GLK T + + G +FF ++ G G +TY L++ F
Sbjct: 275 VLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFG 334
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G EA++ ++ ME+ + Y EL G ++A +V+E + + P
Sbjct: 335 KAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQ-KGVMPNA 393
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
IT+T +I + G D+ + +F MK+ C PN T NA+L + + S++ E+ +
Sbjct: 394 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKK---SRSNEMIKM 450
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
S+G P+ T++++L ++ V++ M G + D+
Sbjct: 451 LCDMKSNG----------CFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDT 500
Query: 575 HAWLLVEASRAG 586
L+ R G
Sbjct: 501 FNTLISAYGRCG 512
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/436 (17%), Positives = 169/436 (38%), Gaps = 49/436 (11%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
+ +M Q G+M ++ G G +A+ + Y +K+ + + Y +L++
Sbjct: 381 IEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLF---YSMKEAGCVPNTCTYNAVLSM 437
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ----- 292
LGK R +E +++ M + +P+ A ++++ G G+ K + ++ M+
Sbjct: 438 LGKKSRSNEMIKMLCDMKSN-GCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEP 496
Query: 293 -------------------KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
SK M R ++ + YNA+LNA W+
Sbjct: 497 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV----TTYNALLNALARKGDWRSG 552
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA-LTYKVLVR 392
V ++ G KP+ +Y L ++ + G Y L E + G+ + + + L+
Sbjct: 553 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNY-LGIERIEEGINEGQIFPSWMLLRTLLL 611
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
A ++ + + A ++ G ++ + N + A +++ I
Sbjct: 612 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHE-DGLN 670
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P +T+ L+ + G I + + K +P++ + N ++K + R + +A +
Sbjct: 671 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRM 730
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
E T ++P +TY++ + + E V + MA + C+ +
Sbjct: 731 LSEMTERG-------------IRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPN 777
Query: 572 QTKHAWLLVEASRAGK 587
+ ++ RAGK
Sbjct: 778 ELTFKMVVDGYCRAGK 793
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 42/302 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L KG WR +V+ D+KS K +P E ++LML
Sbjct: 539 LLNALARKGDWRSGENVIS---------DMKS------------KGFKPTET--SYSLML 575
Query: 256 EDCNLYPDIAAYHSV-----AVTLGQV----GLLKELVKLIERMRQ-KPSKRIKNMHRKN 305
+ Y Y + + GQ+ LL+ L+ + R S+R + +K+
Sbjct: 576 Q---CYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 632
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
+PD+V++N++L+ ++ + + + + + GL P TY M++ ++ G+
Sbjct: 633 G---YKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGEC 689
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
E + + KS ++Y +++ F +G + EAV + M +RG+ Y
Sbjct: 690 WKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTF 749
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--D 483
G + + V+E + +P E+TF ++ G + + +K D
Sbjct: 750 VSGYTAMGMYGEIEDVIECMAK-NDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 808
Query: 484 HC 485
C
Sbjct: 809 PC 810
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 192/432 (44%), Gaps = 41/432 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLV+ + E+ +T + F + +S L+ T+ ++ L+KGL D G W +A+ + +W+
Sbjct: 110 VLVNSIVEQPLTGLSRFFDSV--KSELLRTD--LVSLVKGLDDSGHWERAVFLFEWLVLS 165
Query: 220 KDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQV 277
+ LK V + ILG+ + A ++ + + L++ L D+ AY ++ +
Sbjct: 166 SNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLL--DVRAYTTILHAYSRT 223
Query: 278 GLLKELVKLIERMRQ-KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP-SHQWKGVFW 335
G ++ + L ERM++ PS P LV YN +L+ W+ +
Sbjct: 224 GKYEKAIDLFERMKEMGPS----------------PTLVTYNVILDVFGKMGRSWRKILG 267
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V ++R GLK T + + G EFF ++ G G +TY L++ F
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G EA++ ++ ME+ + Y EL G ++A V+E + + P
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK-KGVMPNA 386
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
IT+T +I + G D+ + +F MK+ C PN T NA+L + + S++ E+ +
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK---SRSNEMIKM 443
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
S+G + P+ T+++ML ++ V++ M G + D+
Sbjct: 444 LCDMKSNGCS----------PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 575 HAWLLVEASRAG 586
L+ R G
Sbjct: 494 FNTLISAYGRCG 505
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 88/440 (20%), Positives = 171/440 (38%), Gaps = 34/440 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ G G + +A+SVL +++ Y +L+A +AG EA + +M
Sbjct: 322 LLQVFGKAGVYTEALSVLKE---MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P+ Y +V G+ G E +KL M++ P+
Sbjct: 379 KK-GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV---------------PNTC 422
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNAVL+ + + + ++ +G P+ AT+ + + G V+ FR+M
Sbjct: 423 TYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G T+ L+ A+ G +A M + G + Y L L G W
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDW 542
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
+ V+ +KS + KP E +++ ++ GG+ I +K+ P+ +
Sbjct: 543 RSGENVISDMKS-KGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRT 601
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+L + + ++ F T GY KPD ++SML + ++
Sbjct: 602 LLLANFKCRALAGSERAF---TLFKKHGY----------KPDMVIFNSMLSIFTRNNMYD 648
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
E + + + G D + L+ R G+C E +L ++ P + + ++
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 615 IQAIVQSNYEKAVALINAMA 634
+ ++AV +++ M
Sbjct: 709 KGFCRRGLMQEAVRMLSEMT 728
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/436 (18%), Positives = 170/436 (38%), Gaps = 49/436 (11%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
+ +M + G+M ++ G G +A+ + Y +K+ + + Y +L++
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF---YSMKEAGCVPNTCTYNAVLSL 430
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ----- 292
LGK R +E +++ M + P+ A ++++ G G+ K + ++ M+
Sbjct: 431 LGKKSRSNEMIKMLCDMKSN-GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 293 -------------------KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
SK M R ++ + YNA+LNA W+
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV----TTYNALLNALARKGDWRSG 545
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA-LTYKVLVR 392
V ++ G KP+ +Y L ++ + G Y L E K G+ + + + L+
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNY-LGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
A ++ + + A ++ G ++ + N + A ++E I+ S
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
L +T+ L+ + G I + + K +P++ + N ++K + R + +A +
Sbjct: 665 DL-VTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
E T ++P +TY++ + + E V + MA + C+ +
Sbjct: 724 LSEMTERG-------------IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPN 770
Query: 572 QTKHAWLLVEASRAGK 587
+ ++ RAGK
Sbjct: 771 ELTFKMVVDGYCRAGK 786
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 120/293 (40%), Gaps = 24/293 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L KG WR +V+ +K K + Y+ +L K G RI N +
Sbjct: 532 LLNALARKGDWRSGENVIS---DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ-KPSKRIKNMHRKNWDPVLEPDL 314
E ++P LL+ L+ + R S+R + +K+ +PD+
Sbjct: 589 EG-QIFPSWM-------------LLRTLLLANFKCRALAGSERAFTLFKKHG---YKPDM 631
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V++N++L+ ++ + + + +R+ GL P TY M++ ++ G+ E +
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ KS ++Y +++ F G + EAV + M +RG+ Y G
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--DHC 485
+ + V+E + +P E+TF ++ G + + +K D C
Sbjct: 752 FAEIEDVIECMAK-NDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPC 803
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 182/445 (40%), Gaps = 72/445 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + L+ L GR +AL +F+ ML P + Y + + ++ + L++
Sbjct: 163 FTFNPLIRALCVRGRVPDALAVFDDMLHR-GCSPSVVTYSILLDATCKASGYRQAMVLLD 221
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR K EPD+V YN ++NA + L G KP
Sbjct: 222 EMRAKGC---------------EPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPD 266
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A TY ++ + S ++ V E F +MA + A +T+ +V + ++G ++ A+ V
Sbjct: 267 AVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVD 326
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--------------------- 447
+M + G + Y + LC+ GR DA+ ++ ++KS
Sbjct: 327 HMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIE 386
Query: 448 -------------LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
P E+TF +I S G +D I + + M ++ C P+I T N
Sbjct: 387 QWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYN 446
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+++ A EL +N Y KPD T++++L+ + +W
Sbjct: 447 SIIDGLCNERCIDDAMELL-----SNLQSYG--------CKPDIVTFNTLLKGLCSVDRW 493
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLFF 610
E E + M S C D T ++ + G LL A ++L E G IP+ +
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKG---LLLQAIETLKIMAENGCIPNQSTY 550
Query: 611 TEMLIQAIVQSN-YEKAVALINAMA 634
+++ A++++ ++A+ L++ M
Sbjct: 551 -NIVVDALLKAGKTQEALKLLSGMT 574
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 15/291 (5%)
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
RI++ R PD +N ++ A + VF + G PS TY + +
Sbjct: 145 RIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILL 204
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ ++ Y +M G +TY VL+ A EG ++EA+ + ++ G
Sbjct: 205 DATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCK 264
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
A Y + LC + RW++ + ++ S P E+TF ++ S G +D I
Sbjct: 265 PDAVTYTPVLKSLCGSERWKEVEELFAEMAS-NKCAPDEVTFNTIVTSLCQQGLVDRAIK 323
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ HM +H C P+I T +++L A EL +R S G KP
Sbjct: 324 VVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL---SRLKSYG----------CKP 370
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
D Y+++L+ + QWE+ E + M S C D+ ++ + G
Sbjct: 371 DTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKG 421
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 155/409 (37%), Gaps = 65/409 (15%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YG 218
+V L ++ + + K V M++ G + +L GL D G A+ +L + YG
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGR-PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
K YT +L L + H + ++ DC PD +++V +L Q
Sbjct: 368 CK-----PDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCP--PDEVTFNTVIASLCQK 420
Query: 278 GLLKELVKLIERMRQK---PSKRIKN------MHRKNWDPVLE-----------PDLVVY 317
GL+ +K++E+M + P N + + D +E PD+V +
Sbjct: 421 GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTF 480
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG-------------- 363
N +L +W+ + + S P A T+ + + Q G
Sbjct: 481 NTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAE 540
Query: 364 --------KYDLVHEFFRKMAKSGEAIGAL-----------TYKVLVRAFWEEGKINEAV 404
Y++V + K K+ EA+ L TY ++ + GK+ EA+
Sbjct: 541 NGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEAL 600
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+R M G+ Y LA +C A+ ++ +++ + S P + +++
Sbjct: 601 DLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLS-PDATFYNDILLG 659
Query: 465 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
D I F HM C P+ T +L+ + + +AK+L
Sbjct: 660 FCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 103/260 (39%), Gaps = 18/260 (6%)
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R A G + +TY +V + G+I +A + M T + L LC
Sbjct: 119 RVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFT---FNPLIRALCVR 175
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGT 491
GR DA+ V + + R P +T++ L+ ++ + + M+ CEP+I T
Sbjct: 176 GRVPDALAVFDDMLH-RGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVT 234
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ +A + + L G KPD TY+ +L++ +
Sbjct: 235 YNVLINAMCNEGDVDEALNILSD-----------LPSHGC--KPDAVTYTPVLKSLCGSE 281
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+W+ E ++ MA + C D+ ++ + G D + E G IP + ++
Sbjct: 282 RWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYS 341
Query: 612 EMLIQAIVQSNYEKAVALIN 631
+L + AV L++
Sbjct: 342 SILDGLCDVGRVDDAVELLS 361
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 94/248 (37%), Gaps = 21/248 (8%)
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+L++ G++ +A R G T Y + C GR +DA ++ S
Sbjct: 102 NILIKRLCSGGRVADAE---RVFATLGASATVVTYNTMVNGYCRAGRIEDA----RRLIS 154
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
P TF LI + G + D +++F M C P++ T + +L + +
Sbjct: 155 GMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYR 214
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+A L +E RA +PD TY+ ++ A + + +
Sbjct: 215 QAMVLLDEM-RAKGC------------EPDIVTYNVLINAMCNEGDVDEALNILSDLPSH 261
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
GC+ D + +L + + +E F + P + F ++ Q ++A
Sbjct: 262 GCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRA 321
Query: 627 VALINAMA 634
+ +++ M+
Sbjct: 322 IKVVDHMS 329
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 196/463 (42%), Gaps = 47/463 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
LLK L G W A+++L W G D L+ ++ LG+ G+ H+ +
Sbjct: 116 LLKALELSGHWEWALALLRWASDEGAADAAALE------MVVRALGREGQ-HD---VVCD 165
Query: 254 MLEDCNLYP----DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+L++ L P D+ AY +V L + G + ++L +R++
Sbjct: 166 LLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQG--------------- 210
Query: 310 LEPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
+ P +V YN VL+ W + + +++R +G++P T + + G D
Sbjct: 211 VVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQA 270
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
FF + G +TY L++ F + G EA+ ++ ME G A Y ELA
Sbjct: 271 VAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGT 330
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-P 487
G +++A ++ + S + P T+ ++ + + G +D+ +++F MK + P
Sbjct: 331 YARAGFFEEAAKCLDTMTS-KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP 389
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ T N + + + F+ E+ EE +R SG T P+ T+++ML
Sbjct: 390 NVNTYNLIFGMLGKKSRFTAMLEMLEEMSR---SGCT----------PNRVTWNTMLAVC 436
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+Y V GM G +L + + L+ R G +D ++ +G P
Sbjct: 437 GKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCL 496
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
+ +L Q ++ A ++++ M F ++ ++ L +
Sbjct: 497 TTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQ 539
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 160/417 (38%), Gaps = 77/417 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G QA++ + LK + + Y LL + GKAG EALR+ M
Sbjct: 257 VIAACGRDGLLDQAVAFFE---DLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEM- 312
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV--- 309
ED PD Y+ +A T + G +E K ++ M K P+ N + V
Sbjct: 313 EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRV 372
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
P++ YN + ++ + + +++ +SG P+ T+
Sbjct: 373 DEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 432
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ V + G D V M G + TY L+ A+ G A M G
Sbjct: 433 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDC 474
+ Y L L G W A +V K+ L++ KP + +++ L+ GG+
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKM--LKNGFKPNDQSYSLLLQCYAKGGNAAGI 550
Query: 475 ISI-----------------------------------FQHMKDHC-EPNIGTVNAMLKV 498
SI FQ +K +P++ N+ML +
Sbjct: 551 ESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAM 610
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ-WE 554
Y++N ++SKA E+F+ ++ L PD TY+S+++ A +++ WE
Sbjct: 611 YAKNGLYSKATEMFDSIKQSG-------------LSPDLITYNSLMDMYAKSNESWE 654
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 179/440 (40%), Gaps = 56/440 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLIER 289
YT +L L +AGR AL++F L + P I Y+ V G++G +V L+E
Sbjct: 183 YTTVLHALSRAGRYERALQLFA-ELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 241
Query: 290 MRQ--------KPSKRIKNMHRKNWDPVLE---------------PDLVVYNAVLNACVP 326
MR S I R D +L+ P +V YNA+L
Sbjct: 242 MRAAGVEPDDFTASTVIAACGR---DGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 298
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + V K++ SG +P A TY ++G ++ + M G T
Sbjct: 299 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 358
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y ++ A+ G+++EA+A M++ G V + Y + L R+ + ++E++
Sbjct: 359 YNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM- 417
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 505
S P +T+ ++ G D + MK E + T N ++ Y R
Sbjct: 418 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 477
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+ A ++++E SSG+T P TY+++L + W + + M
Sbjct: 478 TYAFKMYDEMI---SSGFT----------PCLTTYNALLNVLSRQGDWSTAQSIVSKMLK 524
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-- 623
+G + + ++ LL ++ G +E + + + G I F + ++++ +V +N+
Sbjct: 525 NGFKPNDQSYSLLLQCYAKGGNAAGIE-SIEKEVYVGTI----FPSWVILRTLVIANFKC 579
Query: 624 ------EKAVALINAMAYAP 637
EKA + A Y P
Sbjct: 580 RRLEGVEKAFQEVKAQGYKP 599
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PDLV++N++L + + +F +++SGL P TY M++ +S + +
Sbjct: 598 KPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEK 657
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+++ S ++Y ++ F ++G I EA + M G+ Y+ L
Sbjct: 658 ILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYA 717
Query: 431 NNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
+ + +A VV + + H+ KP+E+T+ ++ S D+ + D
Sbjct: 718 SLEMFNEAREVVNYM--IHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/395 (18%), Positives = 155/395 (39%), Gaps = 74/395 (18%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M++SG +L G +G VL+ G+K SR Y L++ G+
Sbjct: 417 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLN---GMKSCGVELSRDTYNTLISAYGR 473
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKR 297
G A ++++ M+ P + Y+++ L + G ++ +M + KP+ +
Sbjct: 474 CGSRTYAFKMYDEMISS-GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQ 532
Query: 298 -----------------IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
I+++ ++ + + P V+ ++ A + +GV F+++
Sbjct: 533 SYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEV 592
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ G KP + + + ++G Y E F + +SG + +TY L+ + K
Sbjct: 593 KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMY---AKS 649
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
NE+ W+ A +++++KS KP +++
Sbjct: 650 NES-------------------------------WE-AEKILKQLKS-SQVKPDVVSYNT 676
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+I G I + I M D P + T + ++ Y+ +MF++A+E+ N
Sbjct: 677 VINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHN 736
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
LKP E TY ++++ A +++
Sbjct: 737 -------------LKPMELTYRRVVDSYCKAKRYD 758
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 15/177 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ ++S+ + GL + ++ + ++Q L PDL+ YN+++
Sbjct: 599 PDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSG---------------LSPDLITYNSLM 643
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S++ + KQL+ S +KP +Y + + G +M G A
Sbjct: 644 DMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMA 703
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+TY LV + NEA V M + Y + C R+ +A
Sbjct: 704 PCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 760
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 196/463 (42%), Gaps = 47/463 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
LLK L G W A+++L W G D L+ ++ LG+ G+ H+ +
Sbjct: 116 LLKALELSGHWEWALALLRWASDEGAADAAALE------MVVRALGREGQ-HD---VVCD 165
Query: 254 MLEDCNLYP----DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+L++ L P D+ AY +V L + G + ++L +R++
Sbjct: 166 LLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQG--------------- 210
Query: 310 LEPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
+ P +V YN VL+ W + + +++R +G++P T + + G D
Sbjct: 211 VVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQA 270
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
FF + G +TY L++ F + G EA+ ++ ME G A Y ELA
Sbjct: 271 VAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGT 330
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-P 487
G +++A ++ + S + P T+ ++ + + G +D+ +++F MK + P
Sbjct: 331 YARAGFFEEAAKCLDTMTS-KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP 389
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ T N + + + F+ E+ EE +R SG T P+ T+++ML
Sbjct: 390 NVNTYNLIFGMLGKKSRFTAMLEMLEEMSR---SGCT----------PNRVTWNTMLAVC 436
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+Y V GM G +L + + L+ R G +D ++ +G P
Sbjct: 437 GKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCL 496
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
+ +L Q ++ A ++++ M F ++ ++ L +
Sbjct: 497 TTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQ 539
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 160/417 (38%), Gaps = 77/417 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G QA++ + LK + + Y LL + GKAG EALR+ M
Sbjct: 257 VIAACGRDGLLDQAVAFFE---DLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEM- 312
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV--- 309
ED PD Y+ +A T + G +E K ++ M K P+ N + V
Sbjct: 313 EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRV 372
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
P++ YN + ++ + + +++ +SG P+ T+
Sbjct: 373 DEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 432
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ V + G D V M G + TY L+ A+ G A M G
Sbjct: 433 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDC 474
+ Y L L G W A +V K+ L++ KP + +++ L+ GG+
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKM--LKNGFKPNDQSYSLLLQCYAKGGNAAGI 550
Query: 475 ISI-----------------------------------FQHMKDHC-EPNIGTVNAMLKV 498
SI FQ +K +P++ N+ML +
Sbjct: 551 ESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAM 610
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ-WE 554
Y++N ++SKA E+F+ ++ L PD TY+S+++ A +++ WE
Sbjct: 611 YAKNGLYSKATEMFDSIKQSG-------------LSPDLITYNSLMDMYAKSNESWE 654
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 178/440 (40%), Gaps = 56/440 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLIER 289
YT +L L +AGR AL++F L + P I Y+ V G++G +V L+E
Sbjct: 183 YTTVLHALSRAGRYERALQLFA-ELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 241
Query: 290 MRQ--------KPSKRIKNMHRKNWDPVLE---------------PDLVVYNAVLNACVP 326
MR S I R D +L+ P +V YNA+L
Sbjct: 242 MRAAGVEPDDFTASTVIAACGR---DGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 298
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + V K++ SG +P A TY ++G ++ + M G T
Sbjct: 299 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 358
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y ++ A+ G+++EA+A M++ G V + Y + L R+ AML + +
Sbjct: 359 YNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT-AMLEMLEEM 417
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 505
S P +T+ ++ G D + MK E + T N ++ Y R
Sbjct: 418 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 477
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+ A ++++E SSG+T P TY+++L + W + + M
Sbjct: 478 TYAFKMYDEMI---SSGFT----------PCLTTYNALLNVLSRQGDWSTAQSIVSKMLK 524
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-- 623
+G + + ++ LL ++ G +E + + + G I F + ++++ +V +N+
Sbjct: 525 NGFKPNDQSYSLLLQCYAKGGNAAGIE-SIEKEVYVGTI----FPSWVILRTLVIANFKC 579
Query: 624 ------EKAVALINAMAYAP 637
EKA + A Y P
Sbjct: 580 RRLEGVEKAFQEVKAQGYKP 599
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PDLV++N++L + + +F +++SGL P TY M++ +S + +
Sbjct: 598 KPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEK 657
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+++ S ++Y ++ F ++G I EA + M G+ Y+ L
Sbjct: 658 ILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYA 717
Query: 431 NNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
+ + +A VV + + H+ KP+E+T+ ++ S D+ + D
Sbjct: 718 SLEMFNEAREVVNYM--IHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/395 (18%), Positives = 155/395 (39%), Gaps = 74/395 (18%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M++SG +L G +G VL+ G+K SR Y L++ G+
Sbjct: 417 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLN---GMKSCGVELSRDTYNTLISAYGR 473
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKR 297
G A ++++ M+ P + Y+++ L + G ++ +M + KP+ +
Sbjct: 474 CGSRTYAFKMYDEMISS-GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQ 532
Query: 298 -----------------IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
I+++ ++ + + P V+ ++ A + +GV F+++
Sbjct: 533 SYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEV 592
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ G KP + + + ++G Y E F + +SG + +TY L+ + K
Sbjct: 593 KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMY---AKS 649
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
NE+ W+ A +++++KS KP +++
Sbjct: 650 NES-------------------------------WE-AEKILKQLKS-SQVKPDVVSYNT 676
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+I G I + I M D P + T + ++ Y+ +MF++A+E+ N
Sbjct: 677 VINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHN 736
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
LKP E TY ++++ A +++
Sbjct: 737 -------------LKPMELTYRRVVDSYCKAKRYD 758
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 15/177 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ ++S+ + GL + ++ + ++Q L PDL+ YN+++
Sbjct: 599 PDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSG---------------LSPDLITYNSLM 643
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S++ + KQL+ S +KP +Y + + G +M G A
Sbjct: 644 DMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMA 703
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+TY LV + NEA V M + Y + C R+ +A
Sbjct: 704 PCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 760
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 169/415 (40%), Gaps = 32/415 (7%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
+L ++K LG A++V WV +L S ++ ILGKAGR A +
Sbjct: 123 ILGIIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLL 182
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
+ D ++ D+ AY + G ++ V L +M+Q P
Sbjct: 183 ALQND-GVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCN---------------P 226
Query: 313 DLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
L+ YN VLN W V + + +R G+ P TY + + Y+
Sbjct: 227 TLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHL 286
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F++M G +TY L+ F + + EA+ ++ ME G T+ Y L
Sbjct: 287 FQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAK 346
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 490
G ++A+ + ++ + KP T+T L+ G D I +F M+ C+PNI
Sbjct: 347 GGLLEEALDLKTQMVH-KGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNIC 405
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T NA++K++ F++ ++F++ N S PD T++++L
Sbjct: 406 TFNALIKMHGNRGKFAEMMKVFDDIKLCNCS-------------PDIVTWNTLLAVFGQN 452
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
++K M +G ++ L+ SR G + S+LEAG +P
Sbjct: 453 GMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVP 507
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 218/498 (43%), Gaps = 59/498 (11%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+ +VR N + +F+ + ++K LG G A S+L + D+ + YT L
Sbjct: 143 FHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQNDGVHIDV---YAYTCL 199
Query: 235 LAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLL-KELVKLIERMRQ 292
+ +GR +A+ +FN M +D CN P + Y+ V G++G+ + L+E MR
Sbjct: 200 INAYSSSGRYRDAVNLFNKMQQDGCN--PTLITYNVVLNVYGKMGMPWSNVTALVEAMRS 257
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ + PDL YN +++ C ++ +F+Q++ G P TY
Sbjct: 258 RG---------------VAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTY 302
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++V +S + + ++M +G + ++TY L+ A+ + G + EA+ M
Sbjct: 303 NALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVH 362
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+G+ Y L G+ A+ V +++++ KP TF LI + G
Sbjct: 363 KGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAV-GCKPNICTFNALIKMHGNRGKFA 421
Query: 473 DCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ + +F +K +C P+I T N +L V+ +N M S+ +F+E RA G+
Sbjct: 422 EMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRA---GFV------- 471
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA------ 585
+ T+++++ A + ++ VYK M +G D + + +L +R
Sbjct: 472 ---AERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQS 528
Query: 586 ---------GKCHLLEHAFDSLLEA----GEIPHPLFFTEMLIQAIVQSN--YEKAVALI 630
G+C E ++ SLL A EI F E + V+++ K + L+
Sbjct: 529 EKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLV 588
Query: 631 NAMAYAPFHITERQWTEL 648
N+ + TER + EL
Sbjct: 589 NSKSDLLIE-TERAFLEL 605
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/464 (19%), Positives = 183/464 (39%), Gaps = 75/464 (16%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ Y LL + GK+ RP EA+++ M E P Y+S+ + GLL+E + L
Sbjct: 299 KVTYNALLDVFGKSRRPQEAMKVLQEM-EANGFSPTSVTYNSLISAYAKGGLLEEALDLK 357
Query: 288 ERMRQKPSKR--------IKNMHRKNWDPV------------LEPDLVVYNAVLNACVPS 327
+M K K + + D +P++ +NA++
Sbjct: 358 TQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNR 417
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + VF ++ P T+ + V Q+G V F++M ++G T+
Sbjct: 418 GKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTF 477
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ A+ G ++A+A ++M + GVV S Y + L G W+ + V+ +++
Sbjct: 478 NTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMED 537
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-------------------------- 481
R KP E++++ L+ + +G I+ + + +
Sbjct: 538 GR-CKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLI 596
Query: 482 ----------KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL--FEETTRANSSGYTFLSGD 529
+ P+I T+NAML +Y R M +KA E+ F TR
Sbjct: 597 ETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETR------------ 644
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
P TY+S++ + + ++ E + + + G + D+ + ++ R G+
Sbjct: 645 ---FTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMK 701
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
F + ++ +P + + + S + +A+ ++ M
Sbjct: 702 EASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYM 745
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 148/372 (39%), Gaps = 46/372 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ L+ + G G+ E +++F+ ++ CN PDI ++++ GQ G
Sbjct: 406 TFNALIKMHGNRGKFAEMMKVFD-DIKLCNCSPDIVTWNTLLAVFGQNG----------- 453
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + S K M R + V E D +N +++A + V+K + ++G+ P
Sbjct: 454 MDSQVSGIFKEMKRAGF--VAERD--TFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDL 509
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+TY + + + G ++ + +M L+Y L+ A+ GK E + A
Sbjct: 510 STYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAY-ANGKEIERMNAFAE 568
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK--IKSLRHSKPLEITFTGLIISSMD 467
G V T +V + L N+ D ++ E+ ++ R +IT ++S
Sbjct: 569 EIYSGSVETHAVLLK-TLVLVNSK--SDLLIETERAFLELRRRGISPDITTLNAMLSIYG 625
Query: 468 GGH-IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT--------- 516
+ I M + P++ T N+++ +YSR++ F K++E+ E
Sbjct: 626 RKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRI 685
Query: 517 -------------RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
R + F + L PD TY++ + A + V + M
Sbjct: 686 SYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYM 745
Query: 564 ALSGCQLDQTKH 575
GC+ DQ +
Sbjct: 746 IKQGCKPDQNTY 757
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/187 (18%), Positives = 74/187 (39%), Gaps = 15/187 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI +++ G+ ++M K + + MH + P L YN+++
Sbjct: 612 PDITTLNAMLSIYGR-----------KQMVAKAHEILNFMHETRF----TPSLTTYNSLM 656
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
S ++ + +++ + G+KP +Y + ++G+ F +M S
Sbjct: 657 YMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALV 716
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+TY + + + EA+ VR M ++G + Y + C + +A
Sbjct: 717 PDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSF 776
Query: 442 VEKIKSL 448
V+ + +L
Sbjct: 777 VKNLSNL 783
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 176/410 (42%), Gaps = 57/410 (13%)
Query: 185 GLMFTEGQ-MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR---FVYTKLLAILGK 240
GL + + M LLK L +G ++A+ + DW+ L+ +L S + YT +++ G
Sbjct: 229 GLYYLDSSAMAALLKELAKQGYLKRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGS 288
Query: 241 AGRPHEALRIFNLMLE---DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
+ AL + M DCN++ +A +V + ++ L
Sbjct: 289 HQQLRRALELVAEMRSRGIDCNVH-TYSALMNVCIKANELDL------------------ 329
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
++++++ + P+LV YN +++ V QW+ V L K ++ TY +
Sbjct: 330 AQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVIS 389
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+SG+ + + + KM +G A TY L+ A+ ++G++ +A+ R+M +RG
Sbjct: 390 ACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCER 449
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
Y L GRW+ A+ + K+ + KP +TF LI + GGH + +
Sbjct: 450 NVITYSSLISACEKAGRWEMALELFSKMHK-ENCKPNVVTFNSLIAACSHGGHWEKASEL 508
Query: 478 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
F+ M+ C+P+ T ++ Y R + +A + FE+ PD
Sbjct: 509 FEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGC-------------HPD 555
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
++S++E W+ SG L Q+K L A+R+G
Sbjct: 556 AAVFNSLMEV-----LWQ-----------SGVLLAQSKALQLWTLANRSG 589
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 159/356 (44%), Gaps = 26/356 (7%)
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ-KPSKRIKNMHRKNWDPVLEPDLVVYNA 319
Y D +A ++ L + G LK V++ + +R +PS + ++ DL Y
Sbjct: 232 YLDSSAMAALLKELAKQGYLKRAVEIFDWLRNLEPSHELSSLC----------DLYTYTT 281
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++ C Q + + ++R G+ + TY M V +++ + DL + +++M + G
Sbjct: 282 MISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEG 341
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ +TY +L+ + + + EAV + +E++ + Y + +G+ + A+
Sbjct: 342 CSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQAL 401
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 498
V EK+ + KP T+T LI + G ++ + IF+ M + CE N+ T ++++
Sbjct: 402 KVYEKMLA-AGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISA 460
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ + A ELF + + N KP+ T++S++ A + WE
Sbjct: 461 CEKAGRWEMALELFSKMHKENC-------------KPNVVTFNSLIAACSHGGHWEKASE 507
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+++ M GC+ D + L+ R G+ AF+ + G P F ++
Sbjct: 508 LFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLM 563
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/273 (18%), Positives = 112/273 (41%), Gaps = 30/273 (10%)
Query: 390 LVRAFWEEGKINEAVAA---VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
L++ ++G + AV +RN+E + + Y + G Q +E +
Sbjct: 241 LLKELAKQGYLKRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALELVA 300
Query: 447 SLRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 502
+R S+ ++ T++ L+ + +D +++ M ++ C PN+ T N ++ VY +
Sbjct: 301 EMR-SRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKR 359
Query: 503 DMFSKA--------KELFEETTRANSSGYTFLSGDGAP--------------LKPDEYTY 540
+ +A K+ + R ++ + + G P +KP TY
Sbjct: 360 CQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTY 419
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
++++ A Q E +++ M GC+ + ++ L+ +AG+ + F + +
Sbjct: 420 TALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHK 479
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
P+ + F ++ ++EKA L M
Sbjct: 480 ENCKPNVVTFNSLIAACSHGGHWEKASELFEQM 512
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 164/382 (42%), Gaps = 41/382 (10%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y ++ + G + + ++L+ M + +P+ + YNA L
Sbjct: 280 PDVVIYSTLVNGFSEQGRVDDAIELLNGM------------------LCKPNTICYNAAL 321
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W+ V + ++ + P+ AT+ + + Q+G D E +M K G
Sbjct: 322 KGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCR 381
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
A+ Y L+ +F E+G++++A+ + +M V + + + LC RW DA +
Sbjct: 382 PDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVISFNAALKG---LCRAERWDDAEEL 438
Query: 442 VEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
+ ++ LR PL E+TF LI S G +++ I +F+ M + C P+I T ++++
Sbjct: 439 I--VQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGL 496
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
S + A ELF+ P KPD + Y+++L+ A +WE +
Sbjct: 497 SEQGLVESAIELFQSM----------------PCKPDIFGYNAVLKGLCRAARWEDAGEL 540
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
MA C ++ L+ + G F+ + + G P + ++
Sbjct: 541 ISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSE 600
Query: 620 QSNYEKAVALINAMAYAPFHIT 641
Q + A L++ M+ P ++
Sbjct: 601 QGRLDDARRLLSTMSCKPDAVS 622
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 146/347 (42%), Gaps = 42/347 (12%)
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM----- 301
I ++ +DC P+ A + + L Q GL+ ++++E+M + +P I N
Sbjct: 337 IVEMVRKDC--LPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSF 394
Query: 302 -HRKNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ D L+ PD++ +NA L + +W + Q+ + T+
Sbjct: 395 SEQGRVDDALKLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTF 454
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ ++ + Q+G+ + E F +M K G +TY L+ E+G + A+ ++M
Sbjct: 455 NILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPC 514
Query: 413 R-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+ + G +V L C RW+DA ++ + + + P EITF LI S G +
Sbjct: 515 KPDIFGYNAVLKGL----CRAARWEDAGELISNM-ARKDCPPNEITFNILINSLCQKGLV 569
Query: 472 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
D I +F+ M + P+I T NA++ +S A+ L +
Sbjct: 570 DRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMS-------------- 615
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
KPD +Y+S L+ A +W+ E V M C ++ +
Sbjct: 616 --CKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKY 660
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 134/331 (40%), Gaps = 25/331 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN VL + QW+ + ++ ++ P+ T+ + Q+G D
Sbjct: 208 VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAV 267
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-C 428
+ +M + G + Y LV F E+G++++A+ + M + ++ Y A
Sbjct: 268 QLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGM----LCKPNTICYNAALKG 323
Query: 429 LCNNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
LC RW+D L+VE ++ + P E TF+ L G +D + + + M K C
Sbjct: 324 LCIAQRWEDVGQLIVEMVR--KDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCR 381
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+ N ++ +S A +L + P PD ++++ L+
Sbjct: 382 PDAVIYNTLIYSFSEQGRVDDALKLL----------------NSMPCSPDVISFNAALKG 425
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
A +W+ E + M C L + L+ + G+ + F+ + + G P
Sbjct: 426 LCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPD 485
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
+ ++ ++ Q E A+ L +M P
Sbjct: 486 IVTYSSLINGLSEQGLVESAIELFQSMPCKP 516
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 26/262 (9%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
LKGL W A ++ V L++ L + L+ L + GR + A+ +F M +
Sbjct: 423 LKGLCRAERWDDAEELI--VQMLREDCPLIE-MTFNILIDSLCQNGRVNNAIEVFEQMPK 479
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
PDI Y S+ L + GL++ ++L + M P K PD+
Sbjct: 480 Y-GCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCK---------------PDIFG 520
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YNAVL + +W+ + + + P+ T+ + + + Q G D E F +M
Sbjct: 521 YNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMP 580
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
K G TY L+ F E+G++++A + M + A Y LC RW+
Sbjct: 581 KYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSYNSALKGLCRAERWK 637
Query: 437 DAMLVVEKIKSLRHSKPLEITF 458
+A VV ++ ++ P E+TF
Sbjct: 638 EAEEVVAEMLRMK-CPPNEVTF 658
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 18/213 (8%)
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 488
LC R DA V++ +K+ + P ++ L+ G + D + N
Sbjct: 122 LCAQRRLADAERVLDALKAAGAADP--VSHNTLVAGYCRDGRLADAERLLAAAGLSGAAN 179
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T ++ Y R+ + A L P+ PD YTY+++L
Sbjct: 180 VVTYTTLINGYCRSGRLADALALIASM----------------PVAPDTYTYNTVLMGLC 223
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A QWE E + M + C ++ A + + G D + + G P +
Sbjct: 224 GARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVV 283
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
++ ++ Q + A+ L+N M P I
Sbjct: 284 IYSTLVNGFSEQGRVDDAIELLNGMLCKPNTIC 316
>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
Length = 810
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 207/514 (40%), Gaps = 80/514 (15%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +SG + ++ L G +AM VLD + + R + VY ++++ L +
Sbjct: 229 MIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGV---IVYNEIISCLAE 285
Query: 241 AGRPHEALRIFN---------------------------------LMLEDCNLYPDIAAY 267
GR EAL +F+ ++ +DC PD +
Sbjct: 286 LGRVEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCP--PDEVTF 343
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQ---KP-----SKRIKNM-HRKNWDPVLE------- 311
++V L GL+ ++++E+M + KP S + + R D LE
Sbjct: 344 NTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPW 403
Query: 312 -PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P+ V Y +VL + +W V + ++ ++ L T+GL ++ + Q G D E
Sbjct: 404 KPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAE 463
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME-QRGVVGTASVYYELACCL 429
R+M K G + + Y L+ F E G +++A+ +NM +R VV Y + L
Sbjct: 464 VLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKRNVV----TYNYMLKGL 519
Query: 430 CNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
C +W+DA LV E +K P E+TF+ LI G ++ I +F+ M K +C P
Sbjct: 520 CRAEQWEDAGKLVAEMVKD--ECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMP 577
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ + ++ S + A +L + P KPD YS+ L+
Sbjct: 578 NVIIYSTLINGLSDQECVDDALKLLNDM----------------PCKPDTICYSAALKGL 621
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
A +WE + M C D+ + L+ G + +L+ +P+
Sbjct: 622 CRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNV 681
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
++ ++ Q E A+ L+ M P I
Sbjct: 682 FIYSSLINGFAEQYRAEDALQLLRNMPCEPDTIC 715
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 153/375 (40%), Gaps = 43/375 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI Y+S+ + G + + ++L KNM K ++V YN +L
Sbjct: 475 PDIIIYNSLINGFSENGSVDDALELF-----------KNMSCKR-------NVVTYNYML 516
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ QW+ + ++ K P+ T+ + + Q G + E F KM K
Sbjct: 517 KGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCM 576
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAM- 439
+ Y L+ ++ +++A+ + +M + ++ Y A LC RW+DA
Sbjct: 577 PNVIIYSTLINGLSDQECVDDALKLLNDMPCK----PDTICYSAALKGLCRAERWEDAGE 632
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 498
L++E I+ ++ P E+TF+ LI + G ++ + + M K C PN+ ++++
Sbjct: 633 LILEMIR--KNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLING 690
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
++ A +L P +PD YS+ L+ A +WE
Sbjct: 691 FAEQYRAEDALQLLRNM----------------PCEPDTICYSAALKGLCRAKRWEDARE 734
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
+ M C LD+ + L+ + G + F+ + G P+ + ++
Sbjct: 735 LIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYS 794
Query: 619 VQSNYEKAVALINAM 633
Q ++ + L+++M
Sbjct: 795 EQRRVDEGLKLLSSM 809
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 115/284 (40%), Gaps = 21/284 (7%)
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
R+ + R D P+ + +L + +W + ++ +SG P+ T+G+ +
Sbjct: 186 RLNDARRLVADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMII 245
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ Q+G D +M+K G + Y ++ E G++ EA+ M + +
Sbjct: 246 HSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCKPDI 305
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
+ Y + LC +GRW+DA ++ + + P E+TF +I G +D +
Sbjct: 306 FS---YNTVMKGLCRDGRWEDAGTLIAGMVR-KDCPPDEVTFNTVISYLCHRGLVDCAME 361
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ + M + C+P+ T +A++ S A EL P KP
Sbjct: 362 VVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTI----------------PWKP 405
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ Y S+L+ A +W+ + M + LD+ ++
Sbjct: 406 NTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLII 449
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 108/284 (38%), Gaps = 24/284 (8%)
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
G+ +A SG A +TY LV + EG++N+A V +M T S
Sbjct: 150 GGRLADAERMLASLALSGSA-DVVTYNTLVAGYCREGRLNDARRLVADMPFAPNSYTNST 208
Query: 422 YYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
+ LC+N W DA L+ E I+S P ++TF +I S G D + +
Sbjct: 209 LLKG---LCSNKEWDDAEELLSEMIRS--GCPPNDLTFGMIIHSLCQNGLADRAMGVLDQ 263
Query: 481 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
M K C + N ++ + +A LF D P KPD ++
Sbjct: 264 MSKCRCTRGVIVYNEIISCLAELGRVEEALHLF----------------DQMPCKPDIFS 307
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
Y+++++ +WE + GM C D+ ++ G + +
Sbjct: 308 YNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMP 367
Query: 600 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
+ G P ++ ++ + + A+ L+ + + P + R
Sbjct: 368 KYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWKPNTVCYR 411
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 87/215 (40%), Gaps = 24/215 (11%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
LKGL W A + + + K L ++ L+ L G A + LML+
Sbjct: 618 LKGLCRAERWEDAG---ELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLK 674
Query: 257 -DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+C P++ Y S+ + ++ ++L+ M EPD +
Sbjct: 675 YEC--MPNVFIYSSLINGFAEQYRAEDALQLLRNMP------------------CEPDTI 714
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+A L + +W+ + ++ + AT+ + + + Q+G D+ E F +M
Sbjct: 715 CYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQM 774
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ G + + LV + E+ +++E + + +M
Sbjct: 775 SVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 171/405 (42%), Gaps = 31/405 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V+ +L L AG+ +A+ F M + C PD Y+++ L + L + ++L+E
Sbjct: 12 VHKSILRGLCDAGQCSDAVLHFREMSKTCP--PDSVTYNTMINGLSKSDRLDDAIRLLEE 69
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M D P++ YN VL+ +++ + W+ +Q+ G P
Sbjct: 70 M---------------VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDV 114
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+Y + + + + D KM + G +TY LV F G ++ AV VR
Sbjct: 115 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 174
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M +RG A Y + LC+ + A+ + ++++ P T++ ++ S + G
Sbjct: 175 MTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSG 234
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+DD + + M C PN+ T +++L + +A L + TR+ S
Sbjct: 235 KVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS------- 287
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
P+ TY+++++ + + ++ + M GCQ + + LL + GK
Sbjct: 288 ------PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ ++E G +P+ + +L + E+A L+++M
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/496 (17%), Positives = 205/496 (41%), Gaps = 48/496 (9%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
EA RV+ D++ +R + +++ + ++L++ + ++G A++ +
Sbjct: 132 EACRVM-DKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190
Query: 216 VYGLKDKRDLKSR-----------------FVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
++GL R L S F Y+ ++ L K+G+ +A R+ M+
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK- 249
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
P++ Y S+ L + G L E L++RM + P++V YN
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC---------------SPNIVTYN 294
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+++ + + + +++ G +P+ TY + ++ + GK + M +
Sbjct: 295 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G TY L+ F ++ ++ A + +M Q+G V Y + LC + +
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 414
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
+L++E++ S + P +TF +I + +D +F +++ C PN+ T N+++
Sbjct: 415 VLLLEQMLS-NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 473
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
++ F +A+ L E TR PD TY+++++ + + +
Sbjct: 474 GLCKSRRFDQAEYLLREMTRKQGC------------SPDIITYNTVIDGLCKSKRVDRAY 521
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
++ M G D ++ ++ + + + +L+ G P + + ++
Sbjct: 522 KLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGF 581
Query: 618 IVQSNYEKAVALINAM 633
N +KA+ ++ +
Sbjct: 582 CKTGNLDKALEILQLL 597
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 145/353 (41%), Gaps = 32/353 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y LL + K A ++ + M++ P++ +Y++V L + + E V L+E
Sbjct: 361 FTYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVSYNTVIAGLCKATKVHEGVLLLE 419
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M PD+V +N +++A +++ + +F +++SG P+
Sbjct: 420 QMLSNNCV---------------PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPN 464
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMA-KSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + + +S ++D R+M K G + +TY ++ + +++ A
Sbjct: 465 LVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLF 524
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M G+ Y + LC R+ D V ++ P IT+ LI
Sbjct: 525 LQMLSDGLAPDDVTYSIVISSLCK-WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G++D + I Q + P++ T + + S+ +A EL E RA
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG------- 636
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
L PD TY+++L+ A + E +++ M GC+ D + L+
Sbjct: 637 ------LVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 116/291 (39%), Gaps = 26/291 (8%)
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M ++G+ A V+ + LC+ G+ DA+L ++ + P +T+ +I
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS--KTCPPDSVTYNTMINGLSKSD 58
Query: 470 HIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+DD I + + M D+ PN+ + N +L + + + A L E+
Sbjct: 59 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMR---------- 108
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
G P PD +Y++++ Q + V M GCQ + + L+ R G
Sbjct: 109 -GCP--PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDL 165
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM----AYAPFHITERQ 644
+ E G P+ + + ++ + A+ L M + P T
Sbjct: 166 DGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFT--- 222
Query: 645 WTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
++ + +S D +L+ A+ + + + +T S+L LH LC++ K
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSL---LHGLCKAGK 270
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/524 (20%), Positives = 225/524 (42%), Gaps = 57/524 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L++GL D+G A+S+LD + +R+ + V YT LL + K+ +A+++ + M
Sbjct: 143 LIRGLCDRGRVGDALSLLDDML----RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM 198
Query: 255 -LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ C P+I Y+ + + + + + +++ R+ +PD
Sbjct: 199 RAKGCT--PNIVTYNVIINGMCREDRVDDARQILNRLSSYG---------------FQPD 241
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
V Y VL + +W+ V +F ++ ++ P+ T+ + + + G + E
Sbjct: 242 TVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLD 301
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M++ G +++ + ++G++++A + NM G Y + LC G
Sbjct: 302 RMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG 361
Query: 434 RWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
RW+DA L+ E ++ ++ P E+TF I G ID I + + M ++ C I T
Sbjct: 362 RWEDAKELLNEMVR--KNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVT 419
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
NA++ + A ELF + P +P+ TY+++L A
Sbjct: 420 YNALVNGFCVQGRVDSALELF----------------NSLPCEPNTITYTTLLTGLCHAE 463
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD---SLLEAGEIPHPL 608
+ + + M + C L+ L+ + G +E A + ++E G P+ +
Sbjct: 464 RLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKG---FVEEAIELVQQMMEHGCTPNLI 520
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE--SNEDRISRDKLEKLLN 666
F +L N E+A+ L++ + + ++ + + S EDRI ++ ++ +
Sbjct: 521 TFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRI--EEAVQMFH 578
Query: 667 ALCNCNAASSEITVSNLSRALHALC-RSEKERDLSSSAHFGSQA 709
A+ + + + + L ALC R E +R + AH S +
Sbjct: 579 AVQDMGMRPKAVMYNKI---LSALCKRCETDRAIDFFAHMVSNS 619
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 101/281 (35%), Gaps = 31/281 (11%)
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
GEA L+R G+ ++A +R E G Y L C GR A
Sbjct: 65 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
++ + P T+T LI D G + D +S+ M + C+P++ T +L+
Sbjct: 125 RRLIASMP----VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLE 180
Query: 498 VYSRNDMFSKAKELFEET----TRANSSGYTF--------------------LSGDGAPL 533
++ F +A ++ +E N Y LS G
Sbjct: 181 AVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYG--F 238
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
+PD +Y+++L+ A +WE E ++ M + C ++ L+ R G
Sbjct: 239 QPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIE 298
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
D + E G + ++ Q + A +N M
Sbjct: 299 VLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMG 339
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/379 (17%), Positives = 141/379 (37%), Gaps = 46/379 (12%)
Query: 157 AIRVLVDRLSEREMTAKN-------------------WKFVRIMNQSGLMFTEGQMLKLL 197
AI VL DR+SE TA ++F+ M G +L
Sbjct: 296 AIEVL-DRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVL 354
Query: 198 KGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE- 256
KGL G W A +L+ + K + + + IL + G +A+ + M E
Sbjct: 355 KGLCRAGRWEDAKELLNE---MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEY 411
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
C++ I Y+++ G + ++L N P EP+ +
Sbjct: 412 GCSV--GIVTYNALVNGFCVQGRVDSALELF-----------------NSLPC-EPNTIT 451
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y +L + + + ++ ++ + T+ + + Q G + E ++M
Sbjct: 452 YTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMM 511
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ G +T+ L+ E+ EA+ + + +G+ Y + L R +
Sbjct: 512 EHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIE 571
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 495
+A+ + ++ + +P + + ++ + D I F HM + C PN T +
Sbjct: 572 EAVQMFHAVQDM-GMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVIL 630
Query: 496 LKVYSRNDMFSKAKELFEE 514
++ +R + +A+ + E
Sbjct: 631 IEGLAREGLLKEARYVLSE 649
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 82/209 (39%), Gaps = 23/209 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
YT LL L A R A + M++ DC L ++ ++ + Q G ++E ++L+
Sbjct: 450 ITYTTLLTGLCHAERLDAAAELLAEMMQNDCPL--NVVTFNVLVSFFCQKGFVEEAIELV 507
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEP--------------------DLVVYNAVLNACVPS 327
++M + D + E D + Y+++++
Sbjct: 508 QQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSRE 567
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + +F ++ G++P A Y + + + + D +FF M + TY
Sbjct: 568 DRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTY 627
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+L+ EG + EA + + RGV+
Sbjct: 628 VILIEGLAREGLLKEARYVLSELCSRGVL 656
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 169/406 (41%), Gaps = 31/406 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y LL G EA +F M E + PDI Y + T G++ L+++ +L+
Sbjct: 241 ITYNTLLGACAHRGLGDEAEMVFRTMNES-GIVPDINTYSYLVQTFGKLNRLEKVSELLR 299
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + PD+ YN +L A K VF+Q++ +G +
Sbjct: 300 EMECGGNL---------------PDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVAN 344
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
AATY + + + + G+YD V + F +M S A TY +L++ F E G E V
Sbjct: 345 AATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFH 404
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+M + V Y L G ++DA ++ + + P +TG+I +
Sbjct: 405 DMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNE-KGVVPSSKAYTGVIEAFGQA 463
Query: 469 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
++ + +F M + P + T N+++ ++R ++ +A+ + +R N SG
Sbjct: 464 ALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAIL---SRMNESG----- 515
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
LK D ++++ ++EA Q+E Y M + C+ ++ +L AG
Sbjct: 516 -----LKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGL 570
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
E F + +G +P + + ML A LI+AM
Sbjct: 571 VDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAM 616
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 195/468 (41%), Gaps = 89/468 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + ++T ++ +LG+ G + +F+
Sbjct: 104 VFKEFAQRGDWQRSLRLFKYM-----QRQIWCKPNEHIHTIMITLLGREGLLDKCREVFD 158
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + + + +Y ++ G+ G ++L+ M+Q+ + P
Sbjct: 159 EMPSN-GVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQER---------------VSP 202
Query: 313 DLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
++ YN V+NAC W+G+ +F ++R G++P TY + G D
Sbjct: 203 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMV 262
Query: 372 FRKMAKSG------------EAIGAL-----------------------TYKVLVRAFWE 396
FR M +SG + G L +Y VL+ A+ E
Sbjct: 263 FRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAE 322
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G I EA+ R M+ G V A+ Y L +GR+ D + ++K + ++ P
Sbjct: 323 LGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMK-VSNTDPDAG 381
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF--- 512
T+ LI +GG+ + +++F M +++ EPN+ T ++ + ++ AK++
Sbjct: 382 TYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHM 441
Query: 513 -EETTRANSSGYT------------------FLSGDGAPLKPDEYTYSSMLEASATAHQW 553
E+ +S YT F + + P TY+S++ A A +
Sbjct: 442 NEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLY 501
Query: 554 EYFEYVYKGMALSGCQLDQTKHAW-LLVEASRAGKCHLLEHAFDSLLE 600
+ E + M SG + D H++ ++EA R G + E A S +E
Sbjct: 502 KEAEAILSRMNESGLKRD--VHSFNGVIEAFRQGGQY--EEAVKSYVE 545
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 157/386 (40%), Gaps = 35/386 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ + GS ++AM V ++ + + Y+ LL + GK GR ++ +R L +
Sbjct: 316 LLEAYAELGSIKEAMGVFRQ---MQAAGCVANAATYSVLLNLYGKHGR-YDDVRDLFLEM 371
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N PD Y+ + G+ G KE+V L M ++ +EP++
Sbjct: 372 KVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEEN---------------VEPNMQ 416
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++ AC ++ + + + G+ PS+ Y +E Q+ Y+ F M
Sbjct: 417 TYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTM 476
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G TY L+ AF G EA A + M + G+ + + G++
Sbjct: 477 NEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQY 536
Query: 436 QDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVN 493
++A+ VE K+ + +P E+T ++ G +D+ FQ +K P++
Sbjct: 537 EEAVKSYVEMEKA--NCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYC 594
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
ML +Y++ND + A L + S + G D+ + W
Sbjct: 595 MMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQMIKGDFDDES------------NW 642
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLL 579
+ EYV+ + GC L + LL
Sbjct: 643 QIVEYVFDKLNSEGCGLGMRFYNALL 668
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 216/509 (42%), Gaps = 41/509 (8%)
Query: 198 KGLGDKGSWRQAMSVLDW-VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LML 255
KGL G+W++A+ + W + L + + + ++ ILG+ + ALR+ + + +
Sbjct: 143 KGLDLSGNWKRAVLLFKWAILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISV 202
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ +L D+ A+ ++ ++G + + + E+MR+ L P LV
Sbjct: 203 EEYSL--DVRAWTTILHAYSRIGKYERAITMFEKMRKTG---------------LSPTLV 245
Query: 316 VYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN +L+ W + + ++R +GL+ T + + G D +FF +
Sbjct: 246 TYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFAR 305
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ G G TY L++ F + G +EA++ ++ ME+ Y EL G
Sbjct: 306 LKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGF 365
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
++ ++ + + P IT+T +I + G D +S F+ MK+ C PN+ T N
Sbjct: 366 HEEGADFIDTMIR-KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYN 424
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A+L + + S+ +E+ + S+G P+ T+++ML
Sbjct: 425 AILGMLGKK---SRLEEMIDMLCDMRSNG----------CAPNSVTWNTMLAMCGNKGMH 471
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
+Y V++ M G + ++ L+ R G + ++ +++AG P + +
Sbjct: 472 KYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNAL 531
Query: 614 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNA 673
L + ++E A ++I M F E ++ + + +EK+ + N +
Sbjct: 532 LNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHI 591
Query: 674 ASSEITVSNL------SRALHALCRSEKE 696
S I + L RAL + R+ +E
Sbjct: 592 FPSWILLRTLVLANFKRRALMGMERAFQE 620
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 186/476 (39%), Gaps = 77/476 (16%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +GL F E ++ G +G +A + LK + + F Y LL + GK
Sbjct: 271 MRSNGLEFDEFTCSTVISACGREGLLDEARK---FFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK- 296
AG EAL I M E N PD+ Y+ + + G +E I+ M +K P+
Sbjct: 328 AGIYSEALSILKEM-EKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAI 386
Query: 297 ----------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ + R+ + P++ YNA+L + + + + +
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R +G P++ T+ + + G + V+ FR+M G T+ L+ A+ G
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ 506
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+ V M + G + Y L L G W+ A V+ +KS + KP E +++
Sbjct: 507 IDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKS-KGFKPNETSYSL 565
Query: 461 LIISSMDGGH------IDDCI-----------------------------SIFQHMKDHC 485
++ GG+ I++ I FQ H
Sbjct: 566 MLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHG 625
Query: 486 -EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+P++ N+ML ++++N M+ +A E+ + L+PD TY+S++
Sbjct: 626 YKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESG-------------LQPDLVTYNSLM 672
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ A + E + KG+ SG + D + ++ R G L++ A +L E
Sbjct: 673 DMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQG---LMQEAIRTLSE 725
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PDLV++N++L+ + + + + +R+SGL+P TY M++ + G+ E
Sbjct: 627 KPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEE 686
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+ + KSG ++Y +++ F +G + EA+ + M G+ Y
Sbjct: 687 ILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYS 746
Query: 431 NNGRWQDAMLVVEKIKSLRH-SKPLEITF 458
G + + V+ + ++H +P E+T+
Sbjct: 747 GKGMFSEVEEVISYM--IQHDCRPNELTY 773
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 28/189 (14%)
Query: 230 VYTKLLAILGKA---GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL---KEL 283
++ +L+I K R HE LR ++ + L PD+ Y+S+ + G +E+
Sbjct: 632 LFNSMLSIFAKNKMYDRAHEMLR----LIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+K I++ KP DLV YN V+ + ++ S
Sbjct: 688 LKGIQKSGGKP------------------DLVSYNTVIKGFCRQGLMQEAIRTLSEMTIS 729
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G++P TY + G + V E M + LTYK++V + + K EA
Sbjct: 730 GIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEA 789
Query: 404 VAAVRNMEQ 412
+ V N+ +
Sbjct: 790 MDFVSNITE 798
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 2/162 (1%)
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ-WKGVFWVFKQLRKSGLKPSA 349
+ K R M R + L+PDLV YN++++ + WKG + K ++KSG KP
Sbjct: 642 KNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGE-EILKGIQKSGGKPDL 700
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+Y ++ + G +M SG +TY V + +G +E +
Sbjct: 701 VSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISY 760
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
M Q Y + C ++++AM V I + S
Sbjct: 761 MIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 216/509 (42%), Gaps = 41/509 (8%)
Query: 198 KGLGDKGSWRQAMSVLDW-VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LML 255
KGL G+W++A+ + W + L + + + ++ ILG+ + ALR+ + + +
Sbjct: 143 KGLDLSGNWKRAVLLFKWAILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISV 202
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ +L D+ A+ ++ ++G + + + E+MR+ L P LV
Sbjct: 203 EEYSL--DVRAWTTILHAYSRIGKYERAITMFEKMRKTG---------------LSPTLV 245
Query: 316 VYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN +L+ W + + ++R +GL+ T + + G D +FF +
Sbjct: 246 TYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFAR 305
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ G G TY L++ F + G +EA++ ++ ME+ Y EL G
Sbjct: 306 LKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGF 365
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
++ ++ + + P IT+T +I + G D +S F+ MK+ C PN+ T N
Sbjct: 366 HEEGADFIDTMIR-KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYN 424
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A+L + + S+ +E+ + S+G P+ T+++ML
Sbjct: 425 AILGMLGKK---SRLEEMIDMLCDMRSNG----------CAPNSVTWNTMLAMCGNKGMH 471
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
+Y V++ M G + ++ L+ R G + ++ +++AG P + +
Sbjct: 472 KYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNAL 531
Query: 614 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNA 673
L + ++E A ++I M F E ++ + + +EK+ + N +
Sbjct: 532 LNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHI 591
Query: 674 ASSEITVSNL------SRALHALCRSEKE 696
S I + L RAL + R+ +E
Sbjct: 592 FPSWILLRTLVLANFKRRALMGMERAFQE 620
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 186/476 (39%), Gaps = 77/476 (16%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +GL F E ++ G +G +A + LK + + F Y LL + GK
Sbjct: 271 MRSNGLEFDEFTCSTVISACGREGLLDEARK---FFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK- 296
AG EAL I M E N PD+ Y+ + + G +E I+ M +K P+
Sbjct: 328 AGIYSEALSILKEM-EKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAI 386
Query: 297 ----------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ + R+ + P++ YNA+L + + + + +
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R +G P++ T+ + + G + V+ FR+M G T+ L+ A+ G
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ 506
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+ V M + G + Y L L G W+ A V+ +KS + KP E +++
Sbjct: 507 IDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKS-KGFKPNETSYSL 565
Query: 461 LIISSMDGGH------IDDCI-----------------------------SIFQHMKDHC 485
++ GG+ I++ I FQ H
Sbjct: 566 MLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHG 625
Query: 486 -EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+P++ N+ML ++++N M+ +A E+ + L+PD TY+S++
Sbjct: 626 YKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESG-------------LQPDLVTYNSLM 672
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ A + E + KG+ SG + D + ++ R G L++ A +L E
Sbjct: 673 DMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQG---LMQEAIRTLSE 725
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PDLV++N++L+ + + + + +R+SGL+P TY M++ + G+ E
Sbjct: 627 KPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEE 686
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+ + KSG ++Y +++ F +G + EA+ + M G+ Y
Sbjct: 687 ILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYS 746
Query: 431 NNGRWQDAMLVVEKIKSLRH-SKPLEITF 458
G + + V+ + ++H +P E+T+
Sbjct: 747 GKGMFSEVEEVISYM--IQHDCRPNELTY 773
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 28/189 (14%)
Query: 230 VYTKLLAILGKA---GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL---KEL 283
++ +L+I K R HE LR ++ + L PD+ Y+S+ + G +E+
Sbjct: 632 LFNSMLSIFAKNKMYDRAHEMLR----LIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+K I++ KP DLV YN V+ + ++ S
Sbjct: 688 LKGIQKSGGKP------------------DLVSYNTVIKGFCRQGLMQEAIRTLSEMTIS 729
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G++P TY + G + V E M + LTYK++V + + K EA
Sbjct: 730 GIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEA 789
Query: 404 VAAVRNMEQ 412
+ V N+ +
Sbjct: 790 MDFVSNITE 798
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 2/162 (1%)
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ-WKGVFWVFKQLRKSGLKPSA 349
+ K R M R + L+PDLV YN++++ + WKG + K ++KSG KP
Sbjct: 642 KNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGE-EILKGIQKSGGKPDL 700
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+Y ++ + G +M SG +TY V + +G +E +
Sbjct: 701 VSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISY 760
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
M Q Y + C ++++AM V I + S
Sbjct: 761 MIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 172/392 (43%), Gaps = 33/392 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ LG +G A S+L+ ++ + D+ + YT L+ GR EA+ +F M
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDV---YAYTSLITACVSNGRYREAVMVFKKME 60
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ P + Y+ + G++G+ P +I + + + PD
Sbjct: 61 EE-GCKPTLITYNVILNVYGKMGM--------------PWNKITGLFEGMKNAGILPDEY 105
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++ C ++ VF+ ++ G P TY ++V +S + E R+M
Sbjct: 106 TYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREM 165
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G + +TY L+ A+ +G + EA+ M +RG+ Y + G+
Sbjct: 166 EVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKD 225
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
+ AM V E++++ KP TF LI + G + + +F+ +K C P+I T N
Sbjct: 226 ESAMRVFEEMRT-AGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNT 284
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+L V+ +N M S+ +F+E R G+ P+ TY++++ A + ++
Sbjct: 285 LLAVFGQNGMDSEVSGVFKEMKRV---GFV----------PERDTYNTLISAYSRCGSFD 331
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+YK M +G D + + +L +R G
Sbjct: 332 QAMAMYKRMLDTGITPDLSTYNAVLAALARGG 363
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 186/463 (40%), Gaps = 73/463 (15%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ Y LL + GK+ R EA+ + M + C+ P I Y+S+ + GLL+E ++L
Sbjct: 139 KVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCS--PSIVTYNSLISAYARDGLLEEAMEL 196
Query: 287 IERMRQKPSK--------RIKNMHRKNWDP----VLE--------PDLVVYNAVLNACVP 326
+M ++ K + R D V E P++ +NA++
Sbjct: 197 KNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGN 256
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
++ + VF++++ P T+ + V Q+G V F++M + G T
Sbjct: 257 RGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDT 316
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L+ A+ G ++A+A + M G+ S Y + L G W+ + ++ +++
Sbjct: 317 YNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQ 376
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM------------------KDHCE-- 486
KP E+T L+ + +G I +++ + + C+
Sbjct: 377 D-GMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLL 435
Query: 487 ----------------PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
P++ T+NAM+ +Y R M +K E+ SG+T
Sbjct: 436 LEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEIL---NFMKESGFT------ 486
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
P TY+S++ + + +E E V K + G + D + ++ R G+
Sbjct: 487 ----PSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKE 542
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
H F + E+G IP + + + S +E+A+ ++ M
Sbjct: 543 ASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYM 585
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 22/253 (8%)
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
V++ +EGK++ A + + N+ + G Y L +NGR+++A++V +K++
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE- 61
Query: 449 RHSKPLEITFTGLI-ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFS 506
KP IT+ ++ + G + +F+ MK+ P+ T N ++ R ++
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+A +FE+ S G+ PD+ TY+++L+ + + + V + M ++
Sbjct: 122 EAAAVFEDM---KSMGFV----------PDKVTYNTLLDVYGKSRRIKEAIEVLREMEVN 168
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
GC + L+ +R G LLE A + ++E G +T ML +
Sbjct: 169 GCSPSIVTYNSLISAYARDG---LLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKD 225
Query: 624 EKAVALINAMAYA 636
E A+ + M A
Sbjct: 226 ESAMRVFEEMRTA 238
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 168/442 (38%), Gaps = 60/442 (13%)
Query: 163 DRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDK 222
D L E M KN M + G+ +L G G AM V + + K
Sbjct: 187 DGLLEEAMELKNQ-----MVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCK 241
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
++ + + L+ + G G+ E +++F ++ C PDI ++++ GQ G+ E
Sbjct: 242 PNICT---FNALIKMHGNRGKFAEMMKVFE-EIKICCCVPDIVTWNTLLAVFGQNGMDSE 297
Query: 283 LVKLIERMRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLN 322
+ + + M++ P + N M+++ D + PDL YNAVL
Sbjct: 298 VSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLA 357
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
A W+ + +++ KP+ T+ + +GK E R +A + E
Sbjct: 358 ALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHA-YANGK-----EIGRMLALAEEIC 411
Query: 383 G------ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
A+ K LV + + EA A ++++G S L + GR Q
Sbjct: 412 SGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLST---LNAMIAIYGRRQ 468
Query: 437 DAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVN 493
E + ++ S P T+ L+ + + + + + +P+I + N
Sbjct: 469 MVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYN 528
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
++ Y RN +A +F E + L PD TY++ + + A +
Sbjct: 529 TVIFAYCRNGRMKEASHIFSEMRESG-------------LIPDVITYNTFVASYAADSMF 575
Query: 554 EYFEYVYKGMALSGCQLDQTKH 575
E V M GC+ +Q +
Sbjct: 576 EEAIDVVCYMIKHGCKPNQNTY 597
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 94/256 (36%), Gaps = 16/256 (6%)
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ GK + + K G Y L+ A G+ EAV + ME+ G T
Sbjct: 10 KEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLI 69
Query: 421 VYYELACCLCNNGR-WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y + G W + E +K+ P E T+ LI G ++ ++F+
Sbjct: 70 TYNVILNVYGKMGMPWNKITGLFEGMKN-AGILPDEYTYNTLITCCRRGSLYEEAAAVFE 128
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
MK P+ T N +L VY ++ +A E+ E S P
Sbjct: 129 DMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCS-------------PSIV 175
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
TY+S++ A A E + M G +LD + +L R GK F+ +
Sbjct: 176 TYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEM 235
Query: 599 LEAGEIPHPLFFTEML 614
AG P+ F ++
Sbjct: 236 RTAGCKPNICTFNALI 251
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 56/137 (40%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P L YN+++ S ++ V K++ G+KP +Y + ++G+
Sbjct: 487 PSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHI 546
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M +SG +TY V ++ + EA+ V M + G + Y + C
Sbjct: 547 FSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCK 606
Query: 432 NGRWQDAMLVVEKIKSL 448
R DA+ + + L
Sbjct: 607 LNRRDDAIKFISSLHEL 623
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 191/455 (41%), Gaps = 47/455 (10%)
Query: 204 GSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
G W A+++L W G D L+ ++ LG+ G+ H+ + +L++ L
Sbjct: 33 GHWEWALALLRWASDEGAADAAALE------MVVRALGREGQ-HD---VVCDLLDEMPLP 82
Query: 262 P----DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVY 317
P D+ AY +V L + G + ++L +R++ + P +V Y
Sbjct: 83 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQG---------------VVPTIVTY 127
Query: 318 NAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
N VL+ W + + +++R +G++P T + + G D FF +
Sbjct: 128 NVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLK 187
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G +TY L++ F + G EA+ ++ ME G A Y ELA G ++
Sbjct: 188 ARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFE 247
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAM 495
+A ++ + S + P T+ ++ + + G +D+ +++F MK + PN+ T N +
Sbjct: 248 EAAKCLDTMTS-KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLI 306
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
+ + F+ E+ EE +R+ + P+ T+++ML +Y
Sbjct: 307 FGMLGKKSRFTAMLEMLEEMSRSGCT-------------PNRVTWNTMLAVCGKRGMEDY 353
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
V GM G +L + + L+ R G +D ++ +G P + +L
Sbjct: 354 VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLN 413
Query: 616 QAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
Q ++ A ++++ M F ++ ++ L +
Sbjct: 414 VLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQ 448
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 160/417 (38%), Gaps = 77/417 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G QA++ + LK + + Y LL + GKAG EALR+ M
Sbjct: 166 VIAACGRDGLLDQAVAFFE---DLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEM- 221
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV--- 309
ED PD Y+ +A T + G +E K ++ M K P+ N + V
Sbjct: 222 EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRV 281
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
P++ YN + ++ + + +++ +SG P+ T+
Sbjct: 282 DEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 341
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ V + G D V M G + TY L+ A+ G A M G
Sbjct: 342 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 401
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDC 474
+ Y L L G W A +V K+ L++ KP + +++ L+ GG+
Sbjct: 402 TPCLTTYNALLNVLSRQGDWSTAQSIVSKM--LKNGFKPNDQSYSLLLQCYAKGGNAAGI 459
Query: 475 ISI-----------------------------------FQHMKDHC-EPNIGTVNAMLKV 498
SI FQ +K +P++ N+ML +
Sbjct: 460 ESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAM 519
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ-WE 554
Y++N ++SKA E+F+ ++ L PD TY+S+++ A +++ WE
Sbjct: 520 YAKNGLYSKATEMFDSIKQSG-------------LSPDLITYNSLMDMYAKSNESWE 563
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 179/440 (40%), Gaps = 56/440 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLIER 289
YT +L L +AGR AL++F L + P I Y+ V G++G +V L+E
Sbjct: 92 YTTVLHALSRAGRYERALQLFA-ELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 150
Query: 290 MRQ--------KPSKRIKNMHRKNWDPVLE---------------PDLVVYNAVLNACVP 326
MR S I R D +L+ P +V YNA+L
Sbjct: 151 MRAAGVEPDDFTASTVIAACGR---DGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 207
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + V K++ SG +P A TY ++G ++ + M G T
Sbjct: 208 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 267
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y ++ A+ G+++EA+A M++ G V + Y + L R+ + ++E++
Sbjct: 268 YNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM- 326
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 505
S P +T+ ++ G D + MK E + T N ++ Y R
Sbjct: 327 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 386
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+ A ++++E SSG+T P TY+++L + W + + M
Sbjct: 387 TYAFKMYDEMI---SSGFT----------PCLTTYNALLNVLSRQGDWSTAQSIVSKMLK 433
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-- 623
+G + + ++ LL ++ G +E + + + G I F + ++++ +V +N+
Sbjct: 434 NGFKPNDQSYSLLLQCYAKGGNAAGIE-SIEKEVYVGTI----FPSWVILRTLVIANFKC 488
Query: 624 ------EKAVALINAMAYAP 637
EKA + A Y P
Sbjct: 489 RRLEGVEKAFQEVKAQGYKP 508
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/395 (18%), Positives = 155/395 (39%), Gaps = 74/395 (18%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M++SG +L G +G VL+ G+K SR Y L++ G+
Sbjct: 326 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLN---GMKSCGVELSRDTYNTLISAYGR 382
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKR 297
G A ++++ M+ P + Y+++ L + G ++ +M + KP+ +
Sbjct: 383 CGSRTYAFKMYDEMISS-GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQ 441
Query: 298 -----------------IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
I+++ ++ + + P V+ ++ A + +GV F+++
Sbjct: 442 SYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEV 501
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ G KP + + + ++G Y E F + +SG + +TY L+ + K
Sbjct: 502 KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMY---AKS 558
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
NE+ W+ A +++++KS KP +++
Sbjct: 559 NES-------------------------------WE-AEKILKQLKS-SQVKPDVVSYNT 585
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+I G I + I M D P + T + ++ Y+ +MF++A+E+ N
Sbjct: 586 VINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHN 645
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
LKP E TY ++++ A +++
Sbjct: 646 -------------LKPMELTYRRVVDSYCKAKRYD 667
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PDLV++N++L + + +F +++SGL P TY M++ +S + +
Sbjct: 507 KPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEK 566
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+++ S ++Y ++ F ++G I EA + M G+ Y+ L
Sbjct: 567 ILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYA 626
Query: 431 NNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
+ + +A VV + + H+ KP+E+T+ ++ S D+ + D
Sbjct: 627 SLEMFNEAREVVNYM--IHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 678
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 15/177 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ ++S+ + GL + ++ + ++Q L PDL+ YN+++
Sbjct: 508 PDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSG---------------LSPDLITYNSLM 552
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S++ + KQL+ S +KP +Y + + G +M G A
Sbjct: 553 DMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMA 612
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+TY LV + NEA V M + Y + C R+ +A
Sbjct: 613 PCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 669
>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 903
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 184/468 (39%), Gaps = 73/468 (15%)
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
D G W +A LD ++ +++ ++ V Y ++A GKAG+ +A+ IF M E +
Sbjct: 312 DCGEWEEA---LDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREMSE-VGI 367
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKL---IERMRQKPSKRIKN------MHRKNWDPVLE 311
PD+ ++ + G GL +E + + +ER +P+ N + W+ L+
Sbjct: 368 KPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQWEEALD 427
Query: 312 ---------------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
D YN L+AC QW + + + K G
Sbjct: 428 FFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLRDMPKRG 487
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+KP +Y + + G+ D R+M + G +T+ + A G+ ++AV
Sbjct: 488 VKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAV 547
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+R M + GV A Y L + GRW+ A+ ++ +++ S P I +T I +
Sbjct: 548 RLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVS-PTVICYTAAIRA 606
Query: 465 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ G D+ + + + M PN+ + +A + ++ + + L E
Sbjct: 607 CGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALG---- 662
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
L P+E+ Y++ + QWE ++ M SG Q +
Sbjct: 663 ---------LTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYT------- 706
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPL-FFTEMLIQAIVQSNYEKAVALI 630
A +L GE+ L +EM +A ++ N + A+I
Sbjct: 707 ---------SAVSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVI 745
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 35/332 (10%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S FVY+K ++ + K R EAL I M E P+ ++ G+ G ++E + L
Sbjct: 123 STFVYSKCISRMAKCFRWGEALDILARMAE-LGAMPNSYCVNAALDACGKAGRVQEALGL 181
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GL 345
+ R +E D+V YN + ACV W+ + +++ G+
Sbjct: 182 MRDARASG---------------IELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGI 226
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
KP+ TY A++V + GK D +M G + Y + AF A +
Sbjct: 227 KPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAAS 286
Query: 406 AVRNMEQRGVVGTASVY-YELACCLCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+R + V +V+ Y LA C C + G W++A+ ++ ++ + +P +T+ ++
Sbjct: 287 TLREIHDWPV--KPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVA 344
Query: 464 SSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ G + I IF+ M + +P++ + + + +A +F E RA
Sbjct: 345 ACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAG--- 401
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++P+ T+++++ A A QWE
Sbjct: 402 ----------VRPNIITHNAVMSACIAAGQWE 423
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 160/380 (42%), Gaps = 37/380 (9%)
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
+ P + +Y++V G+ G + + L+ M ++ L PD++ +N
Sbjct: 487 GVKPVVISYNTVISACGKCGEGDQALALLREMPERG---------------LMPDVITFN 531
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+ + A S + + +++ ++G+ A TY A+ + +G+++ R+M +
Sbjct: 532 SAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGA 591
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G + + Y +RA E GK +EA+ +R M GV Y +GRW+
Sbjct: 592 GVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQG 651
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
+ ++ ++ +L + P E +T I GG + ++ F+ M +P + + +
Sbjct: 652 LALLNEMPALGLT-PNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVS 710
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
+ A EL E + A ++P+E TY++++ A Q
Sbjct: 711 ALAHCGEVDLALELLSEMK------------EEAGIEPNEQTYAAVILACGNGGQGHLVA 758
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRA-GKCHLLEHAFDSL--LEAGEIPHPLFFTEML 614
V + MA +G T + + A RA G+C A L +EA +P +
Sbjct: 759 QVQRDMASAGITPRLTGY----LSAIRASGECGNWSEATSLLGEMEAAGVPPTVSCYNAA 814
Query: 615 IQAIVQSN-YEKAVALINAM 633
I A +S +++A+ L++ M
Sbjct: 815 ITACGKSGKWQEALDLLDEM 834
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 151/396 (38%), Gaps = 45/396 (11%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ D + P++ Y+ T G +E + L+ MR+ +EPD+
Sbjct: 291 IHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGG--------------VEPDV 336
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN V+ AC + Q + +F+++ + G+KP ++ A+ G + FR+
Sbjct: 337 VTYNIVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFRE 396
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAV---------------AAVRNMEQRGVVGTA 419
M ++G +T+ ++ A G+ EA+ V
Sbjct: 397 MERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVAD 456
Query: 420 SVYYELACCLCNNG-RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
+ Y A C G +W A+ ++ + R KP+ I++ +I + G D +++
Sbjct: 457 ACSYNTALSACEVGEQWGRALSLLRDMPK-RGVKPVVISYNTVISACGKCGEGDQALALL 515
Query: 479 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
+ M + P++ T N+ + S + A L E RA + D
Sbjct: 516 REMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAG-------------VAADA 562
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
TYSS L A A +WE + + M +G + + AGK
Sbjct: 563 ITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLRE 622
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ AG P+ ++ + +E+ +AL+N M
Sbjct: 623 MPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEM 658
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 117/306 (38%), Gaps = 55/306 (17%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+ +R M ++G+ L GL G W QA+S+L + G + YT +
Sbjct: 548 RLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTV---ICYTAAI 604
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
G+AG+ EAL + M + P++ +Y + G+ G ++ + L+ M P+
Sbjct: 605 RACGEAGKGDEALLLLREM-PTAGVTPNLFSYSATISACGKDGRWEQGLALLNEM---PA 660
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
L P+ Y A + C QW+ F+ + SG++P+ Y A
Sbjct: 661 LG------------LTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSA 708
Query: 356 MEVMLQSGKYDLVHEFF------------------------------------RKMAKSG 379
+ + G+ DL E R MA +G
Sbjct: 709 VSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAG 768
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
Y +RA E G +EA + + ME GV T S Y +G+WQ+A+
Sbjct: 769 ITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEAL 828
Query: 440 LVVEKI 445
+++++
Sbjct: 829 DLLDEM 834
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 116/304 (38%), Gaps = 37/304 (12%)
Query: 200 LGDKGSWRQAMSVLD----WVYGLKDKRDLKSRFV------YTKLLAILGKAGRPHEALR 249
+ D S+ A+S + W L RD+ R V Y +++ GK G +AL
Sbjct: 454 VADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALA 513
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN--------- 300
+ M E L PD+ ++S L G + V+L MR+ P +
Sbjct: 514 LLREMPER-GLMPDVITFNSAIAALSNSGRPDDAVRL---MREMPRAGVAADAITYSSAL 569
Query: 301 ---MHRKNWDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
H W+ L P ++ Y A + AC + + + +++ +G+
Sbjct: 570 TGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVT 629
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ +Y + + G+++ +M G Y + G+ AVA
Sbjct: 630 PNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVAT 689
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
R+M G+ T Y L + G A+ ++ ++K +P E T+ +I++
Sbjct: 690 FRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVILACG 749
Query: 467 DGGH 470
+GG
Sbjct: 750 NGGQ 753
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 113/287 (39%), Gaps = 17/287 (5%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y+ L L AGR +AL + M + + P + Y + G+ G E + L
Sbjct: 563 ITYSSALTGLAHAGRWEQALSLLREM-QGAGVSPTVICYTAAIRACGEAGKGDEALLL-- 619
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+R+ P+ + P+L Y+A ++AC +W+ + ++ GL P+
Sbjct: 620 -LREMPTAGVT------------PNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPN 666
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
Y A+ G+++ FR M SG + Y V A G+++ A+ +
Sbjct: 667 EFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLS 726
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M++ + Y C NG + V++ + P + I +S +
Sbjct: 727 EMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGEC 786
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G+ + S+ M+ P + NA + ++ + +A +L +E
Sbjct: 787 GNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDE 833
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 85/220 (38%), Gaps = 18/220 (8%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+ G G W Q +++L+ + L + F YT + G G+ A+ F M+
Sbjct: 639 ISACGKDGRWEQGLALLNEMPALGLT---PNEFCYTAAITGCGIGGQWERAVATFRSMIA 695
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
+ P + Y S L G + ++L+ M+++ +EP+
Sbjct: 696 S-GIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAG--------------IEPNEQT 740
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y AV+ AC Q V V + + +G+ P Y A+ + G + +M
Sbjct: 741 YAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEME 800
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+G Y + A + GK EA+ + M +G+V
Sbjct: 801 AAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLV 840
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 59/344 (17%), Positives = 123/344 (35%), Gaps = 65/344 (18%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P VY+ ++ +W + ++ + G P++ A++ ++G+
Sbjct: 118 PAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALDACGKAGRVQE 177
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
R SG + ++Y + A G A++ +R ME + + Y+ A
Sbjct: 178 ALGLMRDARASGIELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGIKPNHITYQAAI 237
Query: 428 CLCNNGRWQD--AMLVVE------KIKSLRHS---------------------------K 452
+C D A L++E +K+ +S K
Sbjct: 238 KVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAASTLREIHDWPVK 297
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAKE 510
P + I + D G ++ + + M++ EP++ T N ++ + KA E
Sbjct: 298 PNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIE 357
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
+F E + +KPD ++++ + A + E +++ M +G +
Sbjct: 358 IFREMSEVG-------------IKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRP 404
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ H ++ AG+ E A D FFTE++
Sbjct: 405 NIITHNAVMSACIAAGQ---WEEALD------------FFTEVV 433
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 151/359 (42%), Gaps = 58/359 (16%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDL------------ 225
V+ + Q F G + LLK L G R+A + DW+ GL D DL
Sbjct: 142 VKAIGQGLYYFDSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTM 201
Query: 226 --------------------KSRFV------YTKLLAILGKAGRPHEALRIFNLML-EDC 258
+SR + Y+ L+ + K AL ++ ML E C
Sbjct: 202 ISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGC 261
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
P++ Y+++ G+ G +E +++++ + ++ ++P++ YN
Sbjct: 262 T--PNLVTYNTLIDVYGKTGAWEEAIRVLDALERQ---------------GIDPEIRTYN 304
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
V+ AC S Q + +++++ +G +P+A TY + ++G+ D + F+ M +
Sbjct: 305 TVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRR 364
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G +TY L+ A + G+ A+ R M G Y L +W+ A
Sbjct: 365 GCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKA 424
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 496
+ E+++ R KP +TF GLI + GH ++ F+ MK H C P+ N ++
Sbjct: 425 QEMFEQMQH-RGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIV 482
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 133/287 (46%), Gaps = 15/287 (5%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+ + Y +++ C Q + + ++R G++ + TY M V ++ + DL + +
Sbjct: 194 NTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVY 253
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R+M G +TY L+ + + G EA+ + +E++G+ Y + +
Sbjct: 254 RQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMS 313
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
G+ Q+A+ + E++ + ++P T+T LI + G +D + IFQ M + CE N+ T
Sbjct: 314 GQAQEALRIYERMLAA-GAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVIT 372
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
++++ + + A ELF E ++ G +P+ TY+S++ A A
Sbjct: 373 YSSLISACEKAGRWELALELFREM---HTEG----------CRPNVVTYNSLIAACAQGA 419
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
QWE + +++ M GC+ D L+ RAG AF+ +
Sbjct: 420 QWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQM 466
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 19/238 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+W +A+ VLD + ++++ Y ++ +G+ EALRI+ ML
Sbjct: 271 LIDVYGKTGAWEEAIRVLDALERQGIDPEIRT---YNTVIIACNMSGQAQEALRIYERML 327
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P Y ++ G+ G L +++ + M ++ +R +++
Sbjct: 328 A-AGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCER---------------NVI 371
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+++++AC + +W+ +F+++ G +P+ TY + Q +++ E F +M
Sbjct: 372 TYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQM 431
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
G A+T+ L+ A+ G A+ A M+ + VY + L G
Sbjct: 432 QHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTG 489
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 84/204 (41%), Gaps = 27/204 (13%)
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T++ L+ + G +D + +++ M + C PN+ T N ++ VY + + +A + +
Sbjct: 232 TYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDAL 291
Query: 516 TR----------------ANSSG--------YTFLSGDGAPLKPDEYTYSSMLEASATAH 551
R N SG Y + GA +P TY++++ A
Sbjct: 292 ERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGA--QPTATTYTALISAYGKNG 349
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
Q + +++ M GC+ + ++ L+ +AG+ L F + G P+ + +
Sbjct: 350 QLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYN 409
Query: 612 EMLIQAIVQSNYEKAVALINAMAY 635
++ + +EKA + M +
Sbjct: 410 SLIAACAQGAQWEKAQEMFEQMQH 433
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 177/389 (45%), Gaps = 49/389 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ +AGR +A+ +F M+ D + P I Y+ V ++ + KE+V+L+
Sbjct: 175 YTALVSAFSRAGRFRDAVAVFRRMV-DSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ + PD YN +++ C +K VF +++ SG +P
Sbjct: 234 MKEHG---------------VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDK 278
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ ++V ++ ++D E ++M + G +TY L+ ++ ++G + +AVA +
Sbjct: 279 VTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQE 338
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDG 468
ME +G+ Y L L G+ A +VE + +R+ KP T+ LI
Sbjct: 339 MEVKGIKPDVVTYTTLISGLDRAGKIDAA--IVEYDEMVRNGCKPNLCTYNALIKMHGVR 396
Query: 469 GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G + +++F ++ P+I T N +L V+ +N + S+ +F+E +A GY
Sbjct: 397 GKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKA---GYI--- 450
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
P+ TY S++ + + ++ +YK M +G D + + +L +R G+
Sbjct: 451 -------PERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503
Query: 588 ---------------CHLLEHAFDSLLEA 601
C E+++ SLL A
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHA 532
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 161/390 (41%), Gaps = 51/390 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG-KYDLVHE 370
PD Y A+++A + +++ VF+++ SG++P+ TY + + V + + V E
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 371 FFRKMAKSGEAIGALTYKVLV-----RAFWEE---------------------------G 398
M + G A TY L+ RA ++E G
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 399 KI---NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
K +EA+ ++ ME+ G + Y L +G + A+ + ++++ ++ KP
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME-VKGIKPDV 348
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+T LI G ID I + M ++ C+PN+ T NA++K++ F + +F+E
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
S+G+ PD T++++L V+K M +G ++
Sbjct: 409 L---RSAGFV----------PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 455
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ L+ SR G L + ++EAG P + +L +E+A L M
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515
Query: 635 YAPFHITERQWTELFESNEDRISRDKLEKL 664
E ++ L + + DK++ L
Sbjct: 516 ERDCKPDEYSYSSLLHAYANAKRLDKMKAL 545
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/422 (19%), Positives = 169/422 (40%), Gaps = 31/422 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT L++ L +AG+ A+ ++ M+ + C P++ Y+++ G G E++ + +
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCK--PNLCTYNALIKMHGVRGKFPEMMAVFD 407
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+R PD+V +N +L + V VFK+++K+G P
Sbjct: 408 ELRSAG---------------FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPE 452
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + G +DL + +++M ++G TY ++ A G+ +A
Sbjct: 453 RDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFA 512
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
ME+R Y L N R + + I S R + T ++++S
Sbjct: 513 EMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVN 572
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ + + + C +I +NAM+ +Y +N M K +++ L
Sbjct: 573 NLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILS------------LMK 620
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ A + TY+S++ + E E + + SG + D+ + ++ R G+
Sbjct: 621 ESA-INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQM 679
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
F + +G P + + + + S +E+A+ L+ M ER + +
Sbjct: 680 KEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSI 739
Query: 649 FE 650
E
Sbjct: 740 VE 741
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 150/396 (37%), Gaps = 40/396 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M+V D L+ + + LLA+ G+ G E +F M
Sbjct: 389 LIKMHGVRGKFPEMMAVFDE---LRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM- 444
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL +++ +RM + + PD+
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG---------------IYPDVS 489
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNAVL+A +W+ +F ++ + KP +Y + + + D + +
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 549
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K LV + + EA A + Q+ +V + N
Sbjct: 550 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMV 609
Query: 436 QDAMLVVEKIKSLRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
+ VEKI SL + + T+ L+ G + C +I +K P+ +
Sbjct: 610 RK----VEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYS 665
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ Y R +A LF E SG LKPD TY+ +++ +
Sbjct: 666 YNTVIYAYGRKGQMKEASRLFSEM---KCSG----------LKPDVVTYNIFVKSYVSNS 712
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+E + + M GC+ ++ + ++ R GK
Sbjct: 713 MFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGK 748
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN V+ A Q K +F +++ SGLKP TY + ++ + + ++
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 718
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
E R M G TY +V + GK+ +A V N+ Q
Sbjct: 719 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 761
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ +++ SG++P +Y + + G+ F +M SG +TY + V+++
Sbjct: 650 ILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYV 709
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
EA+ VR M +G Y + C NG+ DA + V + L
Sbjct: 710 SNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 762
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/312 (18%), Positives = 124/312 (39%), Gaps = 35/312 (11%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ R Y L++ + G A++I+ M+E +YPD++ Y++V L + G ++
Sbjct: 450 IPERDTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAE 508
Query: 285 KLIERMRQKPSK--------------------RIKNMHRKNWDPVLEP------DLVVYN 318
KL M ++ K ++K + + +EP LV+ N
Sbjct: 509 KLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 568
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+ +N + + F +LR+ + + ++ V + M +S
Sbjct: 569 SKVNNLAEAEK------AFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 622
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+ A TY L+ + G + + ++ GV Y + G+ ++A
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
+ ++K KP +T+ + S + ++ I + ++M C+PN T N++++
Sbjct: 683 SRLFSEMKC-SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVE 741
Query: 498 VYSRNDMFSKAK 509
Y RN + AK
Sbjct: 742 GYCRNGKLTDAK 753
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 195/478 (40%), Gaps = 35/478 (7%)
Query: 204 GSWRQAMSVLDWVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
G WR+A+ +D G+K L + Y + G+ G+ +A+R+ M + P
Sbjct: 11 GDWRKALRAVD---GMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTE-GAAP 66
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D++AY +V + G K V + M P+K I PD Y A +N
Sbjct: 67 DLSAYSAVIDACAKGGQWKMAVFFLMEM---PTKGIA------------PDARSYGAAIN 111
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
AC +WK + +++ + P+ Y A+ ++G++++ ++MA G A
Sbjct: 112 ACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAP 171
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
++Y + A G+ EA+ +M GV Y N GRW++A+ ++
Sbjct: 172 DVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLL 231
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR 501
KI ++ + P I+++ +I + G + + + MK PNI T NA + ++
Sbjct: 232 RKIPTVGLT-PNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAK 290
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+ +A +L E L PD +YSS+++A + +W+ + +
Sbjct: 291 GGRWKEAIDLLREMPTVG-------------LPPDVVSYSSVIDACSKGDRWKEAIDILR 337
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
M G + + + ++ G+ + + AG + + +
Sbjct: 338 EMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGE 397
Query: 622 NYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEIT 679
+++A+AL+ M H T ++ ++ K ++LL + A +E+
Sbjct: 398 QWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVC 455
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 184/452 (40%), Gaps = 41/452 (9%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G W A+S++ + + D+ S Y+ ++ G+ GR EAL +F M + PD
Sbjct: 152 GQWEIAVSLVKEMATVGLAPDVIS---YSSAISACGRGGRWEEALELFEDM-RTSGVAPD 207
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERM--------------------RQKPSKRIKNMHR 303
+ Y S G KE V L+ ++ ++ K ++ R
Sbjct: 208 VITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLR 267
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
+ L P+++ YNA ++AC +WK + +++ GL P +Y ++ +
Sbjct: 268 EMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGD 327
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
++ + R+M G + A++Y + A + G+ EA +R M GV + Y
Sbjct: 328 RWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRV-IGY 386
Query: 424 ELACCLCNNG-RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
A C G +W++A+ ++ ++ ++ + +++ I + G + + M
Sbjct: 387 NSAIAACAKGEQWKEALALLREMPTVGLHTTV-FSYSSAIDACGKGNLWIKAKELLREMA 445
Query: 483 D-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
PN N+ + R D + +A +L E L PD ++YS
Sbjct: 446 TVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVG-------------LSPDVFSYS 492
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
S + A A QW+ V K M+ +G D + + S+ G+ + + A
Sbjct: 493 SAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAA 552
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G P+ + ++ + + +++ +AL+ M
Sbjct: 553 GLTPNIISYSSAIDACVRGGQWKEGIALLEEM 584
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 16/197 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ + GK +A + M L P+ Y+S G+ +E V L
Sbjct: 419 FSYSSAIDACGKGNLWIKAKELLREM-ATVGLAPNEVCYNSAIDACGRGDQWEEAVDL-- 475
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+R+ P+ L PD+ Y++ + AC QWK V K++ +GL P
Sbjct: 476 -LREMPTVG------------LSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPD 522
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
Y A++ + G++ + +M +G ++Y + A G+ E +A +
Sbjct: 523 LICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLE 582
Query: 409 NMEQRGVVGTASVYYEL 425
M GVV Y+ L
Sbjct: 583 EMRGSGVVPDVITYHAL 599
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P+ V YN+ ++AC QW+ + +++ GL P +Y A+ + ++
Sbjct: 449 LAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEAL 508
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
++M+ +G A + Y + A + G+ AVA + M G+ Y
Sbjct: 509 AVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDAC 568
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
G+W++ + ++E+++ P IT+ L+++
Sbjct: 569 VRGGQWKEGIALLEEMRG-SGVVPDVITYHALMVT 602
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 214/509 (42%), Gaps = 39/509 (7%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWV---YGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
E LLK L G+W +A+ + +W +G L ++ V ++ ILG+ +
Sbjct: 140 EADFPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVV-ELMVRILGRESQHSI 198
Query: 247 ALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
A ++F+L+ +E +L D+ AY ++ + + G K + L +M++
Sbjct: 199 ASKLFDLIPVEKYSL--DVRAYTTILHSYARTGKYKRAIDLFGKMKEIG----------- 245
Query: 306 WDPVLEPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
L+P LV YN +L+ W + + ++R GL+ T + + G
Sbjct: 246 ----LDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGM 301
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
D +F ++ +G G +TY +++ F + G EA++ ++ ME + Y E
Sbjct: 302 LDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNE 361
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 483
LA G + M V++ + S + P IT+T +I + G DD + +F MKD
Sbjct: 362 LAATYVRAGFLDEGMAVIDTMTS-KGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDL 420
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
C PN+ T N++L + + S+ +++ + +G P+ T+++M
Sbjct: 421 GCAPNVYTYNSVLAMLGKK---SRTEDVIKVLCEMKLNG----------CAPNRATWNTM 467
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
L + + Y V + M G + D+ L+ +R G + ++++G
Sbjct: 468 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGF 527
Query: 604 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK 663
P + +L + +++ A ++I M F E ++ L + +EK
Sbjct: 528 TPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEK 587
Query: 664 LLNALCNCNAASSEITVSNLSRALHALCR 692
+ + + + S I + L H CR
Sbjct: 588 VEKEIYDGHVFPSWILLRTLVLTNHK-CR 615
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 177/430 (41%), Gaps = 80/430 (18%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y +L + GKAG EAL I M ED N PD Y+ +A T + G L E + +I+
Sbjct: 323 TYNSMLQVFGKAGIYTEALSILKEM-EDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDT 381
Query: 290 M-----------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
M R+ + R+ ++ + D P++ YN+VL
Sbjct: 382 MTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMK---DLGCAPNVYTYNSVLAMLGK 438
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + V V +++ +G P+ AT+ + V + GK++ V++ R+M G T
Sbjct: 439 KSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDT 498
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
+ L+ A+ G ++ M + G + Y L L G W+ A V++ ++
Sbjct: 499 FNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMR 558
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD------------------HC--- 485
+ + KP E +++ L+ G++ + + + D C
Sbjct: 559 T-KGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHL 617
Query: 486 ---------------EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+P++ +N+ML +++RN MFSKA+E+ F+ G
Sbjct: 618 RGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLH-----------FIHECG 666
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
L+P+ +TY+ +++ + E V KG+ SG + D + ++ R G L
Sbjct: 667 --LQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKG---L 721
Query: 591 LEHAFDSLLE 600
++ A L E
Sbjct: 722 MQEAIGVLSE 731
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 254 MLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
+ +C L P++ Y+ + V G+ +E++K I+ N P
Sbjct: 661 FIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQ----------------NSGP-- 702
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD+V YN V+ + V ++ G++P+ TY + +D +E
Sbjct: 703 EPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANE 762
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
R M + LTYK+LV + + GK EA+ V +++
Sbjct: 763 VIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKE 804
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 124/330 (37%), Gaps = 34/330 (10%)
Query: 141 KNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGL 200
KN + P+K + L+ + + K M +SG LL L
Sbjct: 488 KNCGFEPDK------DTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNAL 541
Query: 201 GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
+G W+ A SV+ ++ K + Y+ LL KAG + + + D ++
Sbjct: 542 ARRGDWKAAESVIQ---DMRTKGFKPNENSYSLLLHCYSKAGNV-KGIEKVEKEIYDGHV 597
Query: 261 YPDIAAYHSVAVT----------------LGQVGLLKELVKLIERM-----RQKPSKRIK 299
+P ++ +T L + G +LV +I M R K + +
Sbjct: 598 FPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLV-VINSMLSMFARNKMFSKAR 656
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQ-WKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
M + L+P+L YN +++ V + WK V K ++ SG +P +Y ++
Sbjct: 657 EMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAE-EVLKGIQNSGPEPDVVSYNTVIKG 715
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ G +M G +TY + + +EA +R M + +
Sbjct: 716 FCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPS 775
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
Y L C G++++AM V KIK L
Sbjct: 776 ELTYKILVDGYCKAGKYEEAMDFVSKIKEL 805
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 187/436 (42%), Gaps = 44/436 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ LG++G W +A+ +W+ R S+ + +++ LG+ G+ AL +FN
Sbjct: 168 LLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLA-SIMISTLGRLGKVEIALDVFN-RA 225
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS----------------- 295
+ ++ AY ++ G+ G +E +K+ + M++ KP+
Sbjct: 226 QKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVD 285
Query: 296 -KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
K+ ++ + +EPD + +N+++ C W+ VF ++++ G++ TY
Sbjct: 286 LKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNT 345
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + + G+ +L M + +TY ++ + + G EA+ +M++ G
Sbjct: 346 LIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESG 405
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
V Y L GR+ DA+ + ++ + K +T+ LI + G D
Sbjct: 406 VRPDRVSYNTLIDIYAKLGRFDDALTACKDMERV-GLKADVVTYNALIDAYGKQGKYKDA 464
Query: 475 ISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+F MK + PN+ T +A++ YS+ M A +F E RA L
Sbjct: 465 AGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAG-------------L 511
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
KPD YSS++++ E + + M +G Q + + L+ R G+ +E
Sbjct: 512 KPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEA 571
Query: 594 AFDSLLEAGEIPHPLF 609
A G +P +F
Sbjct: 572 A------KGNMPINVF 581
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/515 (20%), Positives = 204/515 (39%), Gaps = 136/515 (26%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLI 287
+ Y+ +++ G++GR EAL++F M + P++ Y+++ G+ G+ LK+ + +
Sbjct: 235 YAYSAMVSAYGRSGRCREALKVFQAM-KKAGCKPNLITYNTIIDACGKGGVDLKKALDIF 293
Query: 288 ERMRQKP-----------------------SKRI-KNMHRKNWDPVLEPDLVVYNAVLNA 323
E M+++ S+R+ M R+ +E D+ YN +++A
Sbjct: 294 EEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRG----IEQDIFTYNTLIDA 349
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
Q + + +R + P+ TY ++ + G ++ + M +SG
Sbjct: 350 VCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPD 409
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
++Y L+ + + G+ ++A+ A ++ME+ G+ Y L G+++DA + +
Sbjct: 410 RVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFD 469
Query: 444 KIKS-------LRHS---------------------------KPLEITFTGLIISSMDGG 469
K+K+ L +S KP + ++ LI S G
Sbjct: 470 KMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCG 529
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN---------------DMFSKAKELFE 513
++D + + Q M + +PNI T N+++ Y RN ++F+K +
Sbjct: 530 LVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRST 589
Query: 514 E------TTRANSSGYT--------FLSGDGAPLKPDEYTYSSML----------EASAT 549
E T++ N++ +T F LKP+ T+S++L EAS
Sbjct: 590 EIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVL 649
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
Q +F+ G+A G + +H W VEA R
Sbjct: 650 LEQMRFFDSWVYGIA-HGLLMGLREHVW--VEAQR------------------------- 681
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
L I + +Y A NA+ +H +RQ
Sbjct: 682 ----LFDEIARMDYATGAAFYNALTDVLWHFGQRQ 712
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/468 (19%), Positives = 192/468 (41%), Gaps = 49/468 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV-TLGQVGLLKELVKLIER 289
+ LL LG G AL+ + M++ +L + + S+ + TLG++G ++ + + R
Sbjct: 165 FPYLLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNR 224
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ ++ Y+A+++A S + + VF+ ++K+G KP+
Sbjct: 225 AQKAG---------------FGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNL 269
Query: 350 ATYGLAMEVMLQSGKYDL--VHEFFRKMAKSGEAIGALTYKVLVR-----AFWEEGKINE 402
TY ++ + G DL + F +M K G +T+ L+ + WE+ +
Sbjct: 270 ITYNTIIDACGKGG-VDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQ--- 325
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
M++RG+ Y L +C G+ + A ++ ++ L++ P +T++ +I
Sbjct: 326 --RVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMR-LKNISPNVVTYSTMI 382
Query: 463 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G ++ I ++ MK+ P+ + N ++ +Y++ F A ++ R
Sbjct: 383 DGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG-- 440
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
LK D TY+++++A +++ ++ M G + ++ L+
Sbjct: 441 -----------LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDA 489
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---PF 638
S+AG F AG P + ++ ++ E AV L+ M A P
Sbjct: 490 YSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPN 549
Query: 639 HITERQWTELFESNE--DRISRDKLEKLLNALCNCNAASSEITVSNLS 684
+T + + N D + K +N S+EI L+
Sbjct: 550 IVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLT 597
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 157/372 (42%), Gaps = 32/372 (8%)
Query: 162 VDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKD 221
V + + E+ A +R+ N S + T M+ G G G + +A+ + + +K+
Sbjct: 350 VCKGGQMELAASIMSSMRLKNISPNVVTYSTMID---GYGKLGCFEEAIGLY---HDMKE 403
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
R Y L+ I K GR +AL M E L D+ Y+++ G+ G K
Sbjct: 404 SGVRPDRVSYNTLIDIYAKLGRFDDALTACKDM-ERVGLKADVVTYNALIDAYGKQGKYK 462
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+ L ++M+ + L P+++ Y+A+++A + + +F + +
Sbjct: 463 DAAGLFDKMKAEG---------------LVPNVLTYSALIDAYSKAGMHQDATSIFVEFK 507
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
++GLKP Y ++ + G + ++M ++G +TY L+ A+ G+++
Sbjct: 508 RAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVD 567
Query: 402 EAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHS------KPL 454
AA NM E+ C L + D V+ + S+ H KP
Sbjct: 568 NVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAV-SVFHEMQQFGLKPN 626
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+TF+ ++ + + + + + M+ G + +L + R ++ +A+ LF+E
Sbjct: 627 VVTFSAILNACSRCSSLQEASVLLEQMRFFDSWVYGIAHGLL-MGLREHVWVEAQRLFDE 685
Query: 515 TTRAN-SSGYTF 525
R + ++G F
Sbjct: 686 IARMDYATGAAF 697
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 167/406 (41%), Gaps = 31/406 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y LL G EA +F M E + PDI Y + T G++ L+++ +L+
Sbjct: 243 ITYNTLLGACAHRGLGDEAEMVFRTMNES-GIVPDINTYSYLVQTFGKLNRLEKVSELLR 301
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + PD+ YN +L A K VF+Q++ +G +
Sbjct: 302 EMESGGNL---------------PDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVAN 346
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
AATY + + + + G+YD V + F +M S A TY +L++ F E G E V
Sbjct: 347 AATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFH 406
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+M + V Y L G ++DA ++ + + P +TG+I +
Sbjct: 407 DMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNE-KGIVPSSKAYTGVIEAFGQA 465
Query: 469 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
++ + +F M + P + T N+ + ++R ++ +A+ + +R N SG
Sbjct: 466 ALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAIL---SRMNESG----- 517
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
LK D ++++ +++A Q+E Y M + C+ ++ +L AG
Sbjct: 518 -----LKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGL 572
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
E F + +G +P + + ML A LI+ M
Sbjct: 573 VDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEM 618
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 171/408 (41%), Gaps = 75/408 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++ +LG+ G + +F+
Sbjct: 106 VFKEFAQRGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIMITLLGREGLLDKCREVFD 160
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + + + Y +V G+ G ++L+ M+Q+ + P
Sbjct: 161 EMPSN-GVARTVYVYTAVINAYGRNGQFHASLELLNGMKQER---------------VSP 204
Query: 313 DLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATY----------GLAME---- 357
++ YN V+NAC W+G+ +F ++R G++P TY GL E
Sbjct: 205 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMV 264
Query: 358 --VMLQSG-------------------KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
M +SG + + V E R+M G +Y VL+ A+ E
Sbjct: 265 FRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAE 324
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G I EA+ R M+ G V A+ Y L +GR+ D + ++K + ++ P
Sbjct: 325 LGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMK-VSNTDPDAG 383
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ LI +GG+ + +++F M +++ EPN+ T ++ + ++ AK++
Sbjct: 384 TYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKIL--- 440
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
N G + P Y+ ++EA A +E V+ M
Sbjct: 441 LHMNEKG----------IVPSSKAYTGVIEAFGQAALYEEALVVFNTM 478
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 158/386 (40%), Gaps = 35/386 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ + GS ++AM V ++ + + Y+ LL + GK GR + IF L +
Sbjct: 318 LLEAYAELGSIKEAMDVFRQ---MQAAGCVANAATYSVLLNLYGKHGRYDDVRDIF-LEM 373
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N PD Y+ + G+ G KE+V L M ++ +EP++
Sbjct: 374 KVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEEN---------------VEPNME 418
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++ AC ++ + + + G+ PS+ Y +E Q+ Y+ F M
Sbjct: 419 TYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTM 478
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G TY + AF G EA A + M + G+ + + G++
Sbjct: 479 NEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQY 538
Query: 436 QDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVN 493
++A+ VE K+ + +P E+T ++ G +D+ FQ +K P++
Sbjct: 539 EEAVKSYVEMEKA--NCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYC 596
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
ML +Y++ND + A L +E S G G +K D S+ W
Sbjct: 597 LMLALYAKNDRLNDAYNLIDEMITMRVS--DIHQGIGQMIKGDFDDESN----------W 644
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLL 579
+ EYV+ + GC L + LL
Sbjct: 645 QIVEYVFDKLNSEGCGLGMRFYNALL 670
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 176/389 (45%), Gaps = 49/389 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ +AGR +A+ +F M+ D + P I Y+ V ++ + KE+V+L+
Sbjct: 157 YTALVSAFSRAGRFRDAVAVFRRMV-DSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 215
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ + PD YN +++ C +K VF +++ SG +P
Sbjct: 216 MKEHG---------------VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDK 260
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ ++V ++ ++D E ++M + G +TY L+ ++ ++G + +AVA +
Sbjct: 261 VTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQE 320
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDG 468
ME +G+ Y L L G+ A +VE + +R+ KP T+ LI
Sbjct: 321 MEVKGMKPDVVTYTTLISGLDRAGKIDAA--IVEYDEMVRNGCKPNLCTYNALIKMHGVR 378
Query: 469 GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G + +++F + P+I T N +L V+ +N + S+ +F+E +A GY
Sbjct: 379 GKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKA---GYI--- 432
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
P+ TY S++ + + ++ +YK M +G D + + +L +R G+
Sbjct: 433 -------PERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 485
Query: 588 ---------------CHLLEHAFDSLLEA 601
C E+++ SLL A
Sbjct: 486 WEQAEKLFAEMEERDCKPDEYSYSSLLHA 514
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 182/440 (41%), Gaps = 42/440 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V + ++ +AGR EA + D PD AY ++ + G ++ V + R
Sbjct: 125 VLATAIRVMARAGRLAEASALL-----DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRR 179
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA----CVPSHQWKGVFWVFKQLRKSGL 345
M D ++P +V YN VL+ VP WK V + +++ G+
Sbjct: 180 M---------------VDSGVQPAIVTYNVVLHVYSKMAVP---WKEVVELVASMKEHGV 221
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P TY + + Y + F +M SG +T+ L+ + + + +EA+
Sbjct: 222 APDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIE 281
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
++ ME+ G + Y L +G + A+ + ++++ ++ KP +T+T LI
Sbjct: 282 VIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME-VKGMKPDVVTYTTLISGL 340
Query: 466 MDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G ID I + M ++ C+PN+ T NA++K++ F + +F+E S+G+
Sbjct: 341 DRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF---RSAGFV 397
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
PD T++++L V+K M +G ++ + L+ SR
Sbjct: 398 ----------PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 447
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
G L + ++EAG P + +L +E+A L M E
Sbjct: 448 CGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYS 507
Query: 645 WTELFESNEDRISRDKLEKL 664
++ L + + DK++ L
Sbjct: 508 YSSLLHAYANAKRLDKMKAL 527
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 187/479 (39%), Gaps = 71/479 (14%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ + LL + GKA R EA+ + M E P + Y+S+ + + GLL++ V L
Sbjct: 260 KVTFNSLLDVYGKARRHDEAIEVIQEM-ERVGCPPSVVTYNSLISSYVKDGLLEQAVALK 318
Query: 288 ERMRQKPSKR--------IKNMHRKN--------WDPVL----EPDLVVYNAVLNACVPS 327
+ M K K I + R +D ++ +P+L YNA++
Sbjct: 319 QEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVR 378
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + VF + R +G P T+ + V Q+G V F++M K+G TY
Sbjct: 379 GKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 438
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ ++ G + A+ + M + G+ S Y + L GRW+ A + +++
Sbjct: 439 VSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEE 498
Query: 448 LRHSKPLEITFTGLIISSMDGGHID------DCI-------------------------- 475
R KP E +++ L+ + + +D D I
Sbjct: 499 -RDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLA 557
Query: 476 ----SIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ + + C +I +NAM+ +Y +N M K +++ L + A
Sbjct: 558 EAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILS------------LMKESA 605
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
+ TY+S++ + E E + + SG + D+ + ++ R G+
Sbjct: 606 -INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 664
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
F + +G P + + + + S +E+A+ L+ M ER + + E
Sbjct: 665 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVE 723
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 149/396 (37%), Gaps = 40/396 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M+V D D+ + LLA+ G+ G E +F M
Sbjct: 371 LIKMHGVRGKFPEMMAVFDEFRSAGFVPDI---VTWNTLLAVFGQNGLDSEVSGVFKEM- 426
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL +++ +RM + + PD+
Sbjct: 427 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG---------------IYPDVS 471
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNAVL+A +W+ +F ++ + KP +Y + + + D + +
Sbjct: 472 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 531
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K LV + + EA A + Q+ +V + N
Sbjct: 532 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMV 591
Query: 436 QDAMLVVEKIKSLRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
+ VEKI SL + + T+ L+ G + C +I +K P+ +
Sbjct: 592 RK----VEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYS 647
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ Y R +A LF E SG LKPD TY+ +++ +
Sbjct: 648 YNTVIYAYGRKGQMKEASRLFSEM---KCSG----------LKPDVVTYNIFVKSYVSNS 694
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+E + + M GC+ ++ + ++ R GK
Sbjct: 695 MFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGK 730
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN V+ A Q K +F +++ SGLKP TY + ++ + + ++
Sbjct: 641 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 700
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
E R M G TY +V + GK+ +A V N+ Q
Sbjct: 701 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 743
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ +++ SG++P +Y + + G+ F +M SG +TY + V+++
Sbjct: 632 ILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYV 691
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
EA+ VR M +G Y + C NG+ DA + V + L
Sbjct: 692 SNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 744
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 59/312 (18%), Positives = 124/312 (39%), Gaps = 35/312 (11%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ R Y L++ + G A++I+ M+E +YPD++ Y++V L + G ++
Sbjct: 432 IPERDTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAE 490
Query: 285 KLIERMRQKPSK--------------------RIKNMHRKNWDPVLEP------DLVVYN 318
KL M ++ K ++K + + +EP LV+ N
Sbjct: 491 KLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 550
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+ +N + + F +LR+ + + ++ V + M +S
Sbjct: 551 SKVNNLAEAEK------AFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 604
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+ A TY L+ + G + + ++ GV Y + G+ ++A
Sbjct: 605 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 664
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
+ ++K KP +T+ + S + ++ I + ++M C+PN T N++++
Sbjct: 665 SRLFSEMKC-SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVE 723
Query: 498 VYSRNDMFSKAK 509
Y RN + AK
Sbjct: 724 GYCRNGKLTDAK 735
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 164/384 (42%), Gaps = 20/384 (5%)
Query: 311 EPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
EPD +N ++N C+ S + V V + + ++G +P+ TY + + +SG L
Sbjct: 132 EPDTTTFNTLINGLCLESKVSEAVVLVARMV-ENGCQPNVVTYNSIVNGICKSGDTSLAL 190
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ RKM + TY ++ + +G I+ A++ + ME +G+ + Y L L
Sbjct: 191 DLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGL 250
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C G+W D + +++ + S R P ITF LI + G + + +++ M PN
Sbjct: 251 CKAGKWNDGVQLLKDMTS-RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPN 309
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T N+++ Y + S+A + + R N S PD T++S+++
Sbjct: 310 TITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS-------------PDIVTFTSLIKGYC 356
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + +++ ++ G + ++ L+ ++GK + E F ++ G +P +
Sbjct: 357 KVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVM 416
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
+ +L EKA+ + + + ++ +T + E K+E N
Sbjct: 417 TYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEG---MCKGGKVEDAWNLF 473
Query: 669 CNCNAASSEITVSNLSRALHALCR 692
C+ + V + + LC+
Sbjct: 474 CSLPCKGVKPNVMTYTVMISGLCK 497
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/404 (18%), Positives = 157/404 (38%), Gaps = 66/404 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ + K+G AL + M E N+ D+ Y ++ +L + G + + L + M
Sbjct: 173 YNSIVNGICKSGDTSLALDLLRKMDER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 231
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K ++ LV YN+++ + +W + K + + P+
Sbjct: 232 ETKG---------------IKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVI 276
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + ++V ++ GK +E +++M G + +TY L+ + + +++EA
Sbjct: 277 TFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA------- 329
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
NN D M+ + P +TFT LI
Sbjct: 330 --------------------NN--MLDLMV-------RNNCSPDIVTFTSLIKGYCKVKR 360
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+D+ + +F+ + K N T + +++ + ++ A+ELF+E
Sbjct: 361 VDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG---------- 410
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+ PD TY +L+ + E +++ + S LD + ++ + GK
Sbjct: 411 ---VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVE 467
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ F SL G P+ + +T M+ + + +A L+ M
Sbjct: 468 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 511
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 135/323 (41%), Gaps = 24/323 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y L+ R EA + +LM+ + N PDI + S+ +V + E +KL
Sbjct: 311 ITYNSLMDGYCMQNRLSEANNMLDLMVRN-NCSPDIVTFTSLIKGYCKVKRVDEGMKLFR 369
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ ++ L + V Y+ ++ S + + +F+++ G+ P
Sbjct: 370 KISKRG---------------LVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPD 414
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TYG+ ++ + +GK + E F + KS + + Y +++ + GK+ +A
Sbjct: 415 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFC 474
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
++ +GV Y + LC G +A +++ K++ ++P + T+ LI + +
Sbjct: 475 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE-DGNEPNDCTYNTLIRAHLRD 533
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
G + + + MK C + + + + DM S A F+E R S G G
Sbjct: 534 GDLTASAKLIEEMK-SCGFSADASSIKMVI----DMLSSAVWWFKEPRR--SPGVKRFRG 586
Query: 529 DGAPLKPDEYTYSSMLEASATAH 551
A L P +S+ + AH
Sbjct: 587 TQAYLMPFNTITASLNFNTIEAH 609
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 176/389 (45%), Gaps = 49/389 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ +AGR +A+ +F M+ D + P I Y+ V ++ + KE+V+L+
Sbjct: 175 YTALVSAFSRAGRFRDAVAVFRRMV-DSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ + PD YN +++ C +K VF +++ SG +P
Sbjct: 234 MKEHG---------------VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDK 278
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ ++V ++ ++D E ++M + G +TY L+ ++ ++G + +AVA +
Sbjct: 279 VTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQE 338
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDG 468
ME +G+ Y L L G+ A +VE + +R+ KP T+ LI
Sbjct: 339 MEVKGMKPDVVTYTTLISGLDRAGKIDAA--IVEYDEMVRNGCKPNLCTYNALIKMHGVR 396
Query: 469 GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G + +++F + P+I T N +L V+ +N + S+ +F+E +A GY
Sbjct: 397 GKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKA---GYI--- 450
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
P+ TY S++ + + ++ +YK M +G D + + +L +R G+
Sbjct: 451 -------PERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503
Query: 588 ---------------CHLLEHAFDSLLEA 601
C E+++ SLL A
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHA 532
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 161/390 (41%), Gaps = 51/390 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG-KYDLVHE 370
PD Y A+++A + +++ VF+++ SG++P+ TY + + V + + V E
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 371 FFRKMAKSGEAIGALTYKVLV-----RAFWEE---------------------------G 398
M + G A TY L+ RA ++E G
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 399 KI---NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
K +EA+ ++ ME+ G + Y L +G + A+ + ++++ ++ KP
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME-VKGMKPDV 348
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+T LI G ID I + M ++ C+PN+ T NA++K++ F + +F+E
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
S+G+ PD T++++L V+K M +G ++
Sbjct: 409 F---RSAGFV----------PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 455
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ L+ SR G L + ++EAG P + +L +E+A L M
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515
Query: 635 YAPFHITERQWTELFESNEDRISRDKLEKL 664
E ++ L + + DK++ L
Sbjct: 516 ERDCKPDEYSYSSLLHAYANAKRLDKMKAL 545
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 177/444 (39%), Gaps = 35/444 (7%)
Query: 212 VLDWVYGLKDKRDLKSR----FVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAA 266
+L+ LK + ++K YT L++ L +AG+ A+ ++ M+ + C P++
Sbjct: 328 LLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK--PNLCT 385
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+++ G G E++ + + R PD+V +N +L
Sbjct: 386 YNALIKMHGVRGKFPEMMAVFDEFRSAG---------------FVPDIVTWNTLLAVFGQ 430
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ V VFK+++K+G P TY + + G +DL + +++M ++G T
Sbjct: 431 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y ++ A G+ +A ME+R Y L N R + + I
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFS 506
S R + T ++++S + + + + C +I +NAM+ +Y +N M
Sbjct: 551 SERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVR 610
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
K +++ L + A + TY+S++ + E E + + S
Sbjct: 611 KVEKILS------------LMKESA-INLSAATYNSLMHMYSRLGDCEKCENILTEIKSS 657
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
G + D+ + ++ R G+ F + +G P + + + + S +E+A
Sbjct: 658 GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEA 717
Query: 627 VALINAMAYAPFHITERQWTELFE 650
+ L+ M ER + + E
Sbjct: 718 IELVRYMVTQGCKPNERTYNSIVE 741
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 149/396 (37%), Gaps = 40/396 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M+V D D+ + LLA+ G+ G E +F M
Sbjct: 389 LIKMHGVRGKFPEMMAVFDEFRSAGFVPDI---VTWNTLLAVFGQNGLDSEVSGVFKEM- 444
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL +++ +RM + + PD+
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG---------------IYPDVS 489
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNAVL+A +W+ +F ++ + KP +Y + + + D + +
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 549
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K LV + + EA A + Q+ +V + N
Sbjct: 550 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMV 609
Query: 436 QDAMLVVEKIKSLRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
+ VEKI SL + + T+ L+ G + C +I +K P+ +
Sbjct: 610 RK----VEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYS 665
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ Y R +A LF E SG LKPD TY+ +++ +
Sbjct: 666 YNTVIYAYGRKGQMKEASRLFSEM---KCSG----------LKPDVVTYNIFVKSYVSNS 712
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+E + + M GC+ ++ + ++ R GK
Sbjct: 713 MFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGK 748
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN V+ A Q K +F +++ SGLKP TY + ++ + + ++
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 718
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
E R M G TY +V + GK+ +A V N+ Q
Sbjct: 719 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 761
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ +++ SG++P +Y + + G+ F +M SG +TY + V+++
Sbjct: 650 ILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYV 709
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
EA+ VR M +G Y + C NG+ DA + V + L
Sbjct: 710 SNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 762
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/312 (18%), Positives = 124/312 (39%), Gaps = 35/312 (11%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ R Y L++ + G A++I+ M+E +YPD++ Y++V L + G ++
Sbjct: 450 IPERDTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAE 508
Query: 285 KLIERMRQKPSK--------------------RIKNMHRKNWDPVLEP------DLVVYN 318
KL M ++ K ++K + + +EP LV+ N
Sbjct: 509 KLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 568
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+ +N + + F +LR+ + + ++ V + M +S
Sbjct: 569 SKVNNLAEAEK------AFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 622
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+ A TY L+ + G + + ++ GV Y + G+ ++A
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
+ ++K KP +T+ + S + ++ I + ++M C+PN T N++++
Sbjct: 683 SRLFSEMKC-SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVE 741
Query: 498 VYSRNDMFSKAK 509
Y RN + AK
Sbjct: 742 GYCRNGKLTDAK 753
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 183/406 (45%), Gaps = 43/406 (10%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ G D + ++SR TK++ IL K+G+P EA+ IF ++E + P +A Y ++ L
Sbjct: 62 FCMGKNDCQIVRSR---TKVMNILIKSGKPQEAIVIFQNLIEGGH-QPSLATYTTLLNAL 117
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
K + ++ + +K ++PD + +NA++NA S +
Sbjct: 118 TTQKYFKPIHSIVSLVEEKQ---------------MKPDSIFFNALINAFAESGNMEDAK 162
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL-TYKVLVRA 393
V +++++SGLKPSA TY ++ +GK D + M+ G L TY +L+RA
Sbjct: 163 KVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRA 222
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-K 452
+ I+EA V M G+ + +A NG+ A ++ +++ R+S K
Sbjct: 223 LCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQ--RNSLK 280
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR---NDMFSKA 508
P E T T +I G + + + MKD +PN+ +N+++ + D +
Sbjct: 281 PNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEV 340
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+L EE ++PD TYS+++ A + A E + +Y M SG
Sbjct: 341 LKLMEEFQ----------------IRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGV 384
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ D ++ L RA + E + ++G P+ + FT ++
Sbjct: 385 KPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVI 430
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 172/417 (41%), Gaps = 33/417 (7%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK+ + ++ L++ +E K V+ M +SGL + L+KG G G
Sbjct: 135 EKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPD 194
Query: 208 QAMSVLDWVYGLKD-KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++M +LD + + K +LK+ Y L+ L K EA + M + PD+
Sbjct: 195 ESMKLLDLMSTEGNVKPNLKT---YNMLIRALCKMENISEAWNVVYKMTAS-GMQPDVVT 250
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW----------------- 306
++++A Q G + +I M++ KP++R + +
Sbjct: 251 FNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMK 310
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D ++P+L+V N+++N V GV V K + + ++P TY M Q+G +
Sbjct: 311 DLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLE 370
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
E + M KSG A Y +L + + ++ +A + M + GV ++ +
Sbjct: 371 KCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVI 430
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
C+ GR +AM V +K+ S L+ TF LI + + Q M++ H
Sbjct: 431 SGWCSVGRMDNAMRVFDKMGEFGVSPNLK-TFETLIWGYAEAKQPWKAEGMLQIMEEFHV 489
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFE--ETTRANSSGYTFLSGDGAPLKPDEYTY 540
+P T+ + + + +AK L + ANS G D P K E Y
Sbjct: 490 QPKKSTILLVAEAWRFAGFKERAKTLLRTVKAKMANSIG----KDDNKPAKMSEKIY 542
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 192/474 (40%), Gaps = 79/474 (16%)
Query: 223 RDLKS------RFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLG 275
+D+KS + Y LL + GK+ R EA+ + M + C+ P I Y+S+
Sbjct: 128 KDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCS--PSIVTYNSLISAYA 185
Query: 276 QVGLLKELVKLIERMRQKP--------SKRIKNMHRKNWDPV------------LEPDLV 315
+ GLLKE ++L +M + + + R D +P++
Sbjct: 186 RDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNIC 245
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+NA++ ++ + VF++++ S P T+ + V Q+G V F++M
Sbjct: 246 TFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 305
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
++G TY L+ A+ G ++A+ + M + G+ S Y + L G W
Sbjct: 306 KRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLW 365
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-------------- 481
+ + + ++K R KP E+T+ L+ + +G I +++ + +
Sbjct: 366 EQSEKIFAEMKDGR-CKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKT 424
Query: 482 ----KDHCE------------------PNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
C+ P++ T+NAML +Y R MF+K E+ N
Sbjct: 425 LVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEIL---NFMN 481
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
SG+T P TY+S++ + + +E E V K + G + D + ++
Sbjct: 482 ESGFT----------PSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVI 531
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
R G+ F + E+G +P + + + S +E A+ ++ M
Sbjct: 532 FAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYM 585
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 164/406 (40%), Gaps = 40/406 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ LG +G A S+L+ ++ KD L + YT L+ GR EA+ +F M
Sbjct: 4 IISMLGKEGKVSVAASLLNDLH--KDGFGLDV-YAYTSLITACVSNGRYREAVMVFKKME 60
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVK-LIERMRQK---PSKRIKN----------M 301
E+ P + Y+ + G++G+ +K L E M+ P + N +
Sbjct: 61 EE-GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSL 119
Query: 302 HR------KNWDPV-LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
H K+ + PD V YNA+L+ S + K V +++ +G PS TY
Sbjct: 120 HEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNS 179
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + G E +M + G + TY L+ F GK A+ M G
Sbjct: 180 LISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAG 239
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ L N G++ + M V E+IK+ P +T+ L+ G +
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKN-SCCVPDIVTWNTLLAVFGQNGMDSEV 298
Query: 475 ISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+F+ MK P T N ++ YSR F +A ++++ A +
Sbjct: 299 SGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAG-------------I 345
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
PD TY+++L A A WE E ++ M C+ ++ + LL
Sbjct: 346 TPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLL 391
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 127/318 (39%), Gaps = 60/318 (18%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y L++ + G +A+ I+ MLE + PD++ Y++V L + GL ++ K+
Sbjct: 314 RDTYNTLISAYSRCGSFDQAMDIYKRMLE-AGITPDLSTYNAVLAALARGGLWEQSEKIF 372
Query: 288 ERM---RQKPSK-----------------RIKNMHRKNWDPVLEP------DLVVYNA-- 319
M R KP++ R+ + + V+EP LV+ N+
Sbjct: 373 AEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKC 432
Query: 320 -----------------------VLNACVPSHQWKGVFW----VFKQLRKSGLKPSAATY 352
LNA + + + +F + + +SG PS ATY
Sbjct: 433 DLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATY 492
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
M + +S ++ E +++ G ++Y ++ A+ G++ EA M +
Sbjct: 493 NSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRE 552
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHI 471
G+V Y + ++DA+ VV + ++H KP + T+ ++ H
Sbjct: 553 SGLVPDVITYNTFVASYAADSMFEDAIDVVRYM--IKHGCKPNQNTYNSVVDGYCKHNHR 610
Query: 472 DDCISIFQHMKDHCEPNI 489
DD I + + +P+I
Sbjct: 611 DDAIMFISSLHE-LDPHI 627
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 167/442 (37%), Gaps = 60/442 (13%)
Query: 163 DRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDK 222
D L + M KN M + G+ LL G G AM V + K
Sbjct: 187 DGLLKEAMELKNQ-----MVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCK 241
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
++ + + L+ + G G+ E +++F + C + PDI ++++ GQ G+ E
Sbjct: 242 PNICT---FNALIKMHGNRGKFAEMMKVFEEIKNSCCV-PDIVTWNTLLAVFGQNGMDSE 297
Query: 283 LVKLIERMRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLN 322
+ + + M++ P + N ++++ + + PDL YNAVL
Sbjct: 298 VSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLA 357
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
A W+ +F +++ KP+ TY + +GK E R +A + E
Sbjct: 358 ALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHA-YANGK-----EIGRMLALAEEIC 411
Query: 383 G------ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
A+ K LV + + EA A ++++G S L L GR Q
Sbjct: 412 SGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLST---LNAMLSIYGRRQ 468
Query: 437 DAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVN 493
E + + S P T+ L+ + + + + + +P+ + N
Sbjct: 469 MFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYN 528
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
++ Y RN +A +F E + L PD TY++ + + A +
Sbjct: 529 TVIFAYCRNGRMKEASRIFSEMRESG-------------LVPDVITYNTFVASYAADSMF 575
Query: 554 EYFEYVYKGMALSGCQLDQTKH 575
E V + M GC+ +Q +
Sbjct: 576 EDAIDVVRYMIKHGCKPNQNTY 597
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 109/238 (45%), Gaps = 23/238 (9%)
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
V++ +EGK++ A + + ++ + G Y L +NGR+++A++V +K++
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE- 61
Query: 449 RHSKPLEITFTGLI-ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFS 506
KP IT+ ++ + G + +F+ MK+ P+ T N ++ R +
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+A +F++ S G+ PD+ TY+++L+ + + + V + M ++
Sbjct: 122 EAAAVFKDM---KSMGFV----------PDKVTYNALLDVYGKSRRTKEAMEVLREMEVN 168
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQS 621
GC + L+ +R G LL+ A + ++E G I +F L+ V++
Sbjct: 169 GCSPSIVTYNSLISAYARDG---LLKEAMELKNQMVEGG-INLDVFTYTTLLSGFVRA 222
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 165/391 (42%), Gaps = 20/391 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P+ V +N +++ ++ + ++ G +P TYG+ + + + G DL
Sbjct: 797 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 856
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
KM + G L Y ++ + +++A+ + ME +G+ Y L CLC
Sbjct: 857 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 916
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
N GRW DA ++ + R P TF+ LI + + G + + ++ M K +P+I
Sbjct: 917 NYGRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++++ + +D +AK++FE S + F PD TY+++++
Sbjct: 976 VTYSSLINGFCMHDRLDEAKQMFEFMV----SKHCF---------PDVVTYNTLIKGFCK 1022
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ E V++ M+ G + + L+ +AG C + + F ++ G P+ +
Sbjct: 1023 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 1082
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 669
+ +L EKA+ + + + T + + E K+E + C
Sbjct: 1083 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG---MCKAGKVEDGWDLFC 1139
Query: 670 NCNAASSEITVSNLSRALHALCR--SEKERD 698
N + + V + + CR S++E D
Sbjct: 1140 NLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 1170
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 140/337 (41%), Gaps = 19/337 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V +N +L+A V ++ V + K++ G++ T+ + + + L
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K G +T LV F ++++AV+ V M + G Y + LC
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
R DA ++I+ + +P +T+T L+ + D + M K PN+
Sbjct: 306 TKRVNDAFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 364
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T +A+L + +N +AKELFEE R + + PD TYSS++
Sbjct: 365 TYSALLDAFVKNGKVLEAKELFEEMVRMS-------------IDPDIVTYSSLINGLCLH 411
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ + ++ M GC D + L+ +A + F + + G + + + +
Sbjct: 412 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 471
Query: 611 TEMLIQAIVQS-NYEKAVALINAMAYAPFHITERQWT 646
LIQ Q+ + +KA + M + F I+ WT
Sbjct: 472 NT-LIQGFFQAGDVDKAQEFFSQMDF--FGISPDIWT 505
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 160/433 (36%), Gaps = 68/433 (15%)
Query: 243 RPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
+ EA+ + + M+ + C PD+ Y V L + G L+ +M Q
Sbjct: 815 KASEAMALIDRMVAKGCQ--PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK------- 865
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
LEP +++YN +++ +FK++ G++P+ TY + +
Sbjct: 866 --------LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 917
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
G++ M + T+ L+ AF +EGK+ EA M +R + +
Sbjct: 918 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 977
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y L C + R +A + E + S +H P +T+ LI +++ + +F+ M
Sbjct: 978 YSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 1036
Query: 482 ------------------------------------KDHCEPNIGTVNAMLKVYSRNDMF 505
D PNI T N +L +N
Sbjct: 1037 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 1096
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
KA +FE R+ ++P YTY+ M+E A + E ++ ++L
Sbjct: 1097 EKAMVVFEYLQRSK-------------MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 1143
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G + D + ++ R G + F + E G +P+ + ++ + + E
Sbjct: 1144 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 1203
Query: 626 AVALINAMAYAPF 638
+ LI M F
Sbjct: 1204 SAELIKEMRSCGF 1216
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 143/382 (37%), Gaps = 43/382 (11%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+S+L + L + D R L+ + R +A+ + + M+E PDI AY+
Sbjct: 242 ALSILGKMLKLGYEPD---RVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYN 297
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ +L + + + + + +K + P++V Y A++N S
Sbjct: 298 AIIDSLCKTKRVNDAFDFFKEIERKG---------------IRPNVVTYTALVNGLCNSS 342
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+W + + K + P+ TY ++ +++GK E F +M + +TY
Sbjct: 343 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 402
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ +I+EA M +G + Y L C R +D M + ++ S
Sbjct: 403 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQ 461
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
R +T+ LI G +D F M P+I T N +L N K
Sbjct: 462 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 521
Query: 508 AKELFEE----------------------TTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
A +FE+ T + + F S LKPD TY++M+
Sbjct: 522 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 581
Query: 546 ASATAHQWEYFEYVYKGMALSG 567
T E +Y M G
Sbjct: 582 GLCTKGLLHEVEALYTKMKQEG 603
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 124/305 (40%), Gaps = 15/305 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD+V YNA++++ + + F FK++ + G++P+ TY + + S ++
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 349
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
M K +TY L+ AF + GK+ EA M + + Y L LC
Sbjct: 350 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 409
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
+ R +A + + + S + +++ LI ++D + +F+ M N
Sbjct: 410 LHDRIDEANQMFDLMVS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N +++ + + KA+E F + D + PD +TY+ +L
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQM-------------DFFGISPDIWTYNILLGGLCD 515
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ E +++ M LD + ++ + GK F SL G P +
Sbjct: 516 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 575
Query: 610 FTEML 614
+T M+
Sbjct: 576 YTTMM 580
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 122/272 (44%), Gaps = 24/272 (8%)
Query: 222 KRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS----------- 269
KR + V Y+ L+ R EA ++F M+ + +PD+ Y++
Sbjct: 968 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK-HCFPDVVTYNTLIKGFCKYKRV 1026
Query: 270 -----VAVTLGQVGLLKELVK---LIERMRQKPSKRI-KNMHRKNWDPVLEPDLVVYNAV 320
V + Q GL+ V LI+ + Q + + + ++ + P+++ YN +
Sbjct: 1027 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 1086
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
L+ + + + VF+ L++S ++P+ TY + +E M ++GK + + F ++ G
Sbjct: 1087 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 1146
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ Y ++ F +G EA A + M++ G + + Y L +G + +
Sbjct: 1147 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 1206
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
++++++S + + + GL+ + + G +D
Sbjct: 1207 LIKEMRSCGFAG--DASTIGLVTNMLHDGRLD 1236
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 17/210 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +AG A IF M+ D + P+I Y+++ L + G L++ + + E +
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EP + YN ++ + + + + +F L G+KP
Sbjct: 1107 QRSK---------------MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 1151
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + + G + F++M + G + Y L+RA +G + ++ M
Sbjct: 1152 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 1211
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAML 440
G G AS L + ++GR + L
Sbjct: 1212 RSCGFAGDAST-IGLVTNMLHDGRLDKSFL 1240
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 181/479 (37%), Gaps = 94/479 (19%)
Query: 108 LKRENLRELKEMFEKDLNWVLDDDVQLGS------------DYFAKNVEWHPEKRWRSEA 155
+K + E KE+FE+ + +D D+ S D + + K ++
Sbjct: 374 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 433
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGL---GDKGSWRQAMSV 212
+ L++ + + K R M+Q GL+ L++G GD ++ S
Sbjct: 434 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493
Query: 213 LD--------WVY-----GLKDKRDLKSRFV----------------YTKLLAILGKAGR 243
+D W Y GL D +L+ V YT ++ + K G+
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 553
Query: 244 PHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK--------- 293
EA +F +L L+ L PDI Y ++ L GLL E+ L +M+Q+
Sbjct: 554 VEEAWSLFCSLSLK--GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 611
Query: 294 -------PSKRIKNMHRKNWDPVLEPDL---VVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
++ IK M + P L D+ V A+ + + + K + ++L ++
Sbjct: 612 SDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKAL--SLLRAFSGKTSYDYREKLSRN 669
Query: 344 GLK--------------------PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
GL PS + + + + K+D+V +M G
Sbjct: 670 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN 729
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
TY +L+ F ++ A+A + M + G L C++ R +A+ +V+
Sbjct: 730 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 789
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT----VNAMLK 497
++ + +P +TF LI + +++ M C+P++ T VN + K
Sbjct: 790 QM-FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 90/449 (20%), Positives = 176/449 (39%), Gaps = 67/449 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L R EA ++F+LM+ L D+ +Y+++ + +++ +KL M
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCL-ADVVSYNTLINGFCKAKRVEDGMKLFREM 459
Query: 291 RQKP--------SKRIKNMHRK-NWDPVLE-----------PDLVVYNAVLNACVPSHQW 330
Q+ + I+ + + D E PD+ YN +L + +
Sbjct: 460 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 519
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ +F+ ++K + TY + M ++GK + F ++ G +TY +
Sbjct: 520 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 579
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVV--------GTASVYYELACCLCNNGRWQDAMLVV 442
+ +G ++E A M+Q G++ G ++ EL + + G A ++
Sbjct: 580 MSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGY---APSLL 636
Query: 443 EKIKSLRHSKPLEI--TFTG---------LIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+ IKS K L + F+G L + + +DD +++F M K P+I
Sbjct: 637 KDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSII 696
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ +L ++ + F L E+ + G P + YTYS ++
Sbjct: 697 EFSKLLSAIAKMNKFDVVISLGEQ-----------MQNLGIP--HNHYTYSILINCFCRR 743
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH--LLEHA---FDSLLEAGEIP 605
Q V M G + + + LL G CH + A D + G P
Sbjct: 744 SQLPLALAVLGKMMKLGYEPNIVTLSSLL-----NGYCHSKRISEAVALVDQMFVTGYQP 798
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + F ++ + + +A+ALI+ M
Sbjct: 799 NTVTFNTLIHGLFLHNKASEAMALIDRMV 827
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 199/486 (40%), Gaps = 44/486 (9%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L + K L +G RQA S L+ +++ + + + Y L+ L ++G EAL ++
Sbjct: 163 LIIFKSLFIRGGLRQAPSALE---KMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRR 219
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ--------------------- 292
M+ + L P + + ++ V G+ +K ++ L+E M
Sbjct: 220 MVSE-GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDG 278
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
K + + M R + D PD+V Y +++A + + +F +++ S KP TY
Sbjct: 279 KIDEAYRIMKRMDDDGC-GPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++ G D V + + +M G A +T+ +LV A + G+INEA + M +
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRK 397
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+GV+ Y L L R DA+ + ++SL +P T+ LI GH
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESL-GVEPTAYTYILLIDYHGKSGHPG 456
Query: 473 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ F+ MK PNI NA L + +AK +F E SSG
Sbjct: 457 KALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL---KSSG--------- 504
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L PD TY+ M++ + Q + + M+ C+ D L+ +AG+
Sbjct: 505 -LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTEL 648
F + E P + + +L + +KAV L +M +P IT +
Sbjct: 564 WQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDC 623
Query: 649 FESNED 654
N++
Sbjct: 624 LCKNDE 629
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 159/379 (41%), Gaps = 53/379 (13%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC----------NLY-------- 261
K K+ +R V+ K LG +P L+++NL+++ NL+
Sbjct: 766 KHKKTSVARNVFVKFTKELGV--KP--TLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGC 821
Query: 262 -PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
PD Y+S+ G+ G + EL L + M + K P+ + YN V
Sbjct: 822 APDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCK---------------PNTITYNMV 866
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
++ V S++ ++ L P+ T+G ++ +L+SG+ D HE F M G
Sbjct: 867 ISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGC 926
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ Y +LV + + G ++ A + M + G+ Y L LC GR DA+
Sbjct: 927 RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALH 986
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
EK+K P + + +I ++ +S+F M++ P++ T N+++
Sbjct: 987 YFEKLKQ-AGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNL 1045
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
M +A +++EE F+ LKP+ +TY++++ + E +
Sbjct: 1046 GIVGMIEEAGKIYEE--------LQFIG-----LKPNVFTYNALIRGYTLSGNSELAYGI 1092
Query: 560 YKGMALSGCQLDQTKHAWL 578
YK M + GC + A L
Sbjct: 1093 YKKMMVGGCDPNTGTFAQL 1111
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 166/402 (41%), Gaps = 39/402 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ L KAGR +EA + + M + + P++ Y+++ L + L + + L M
Sbjct: 372 FTILVNALCKAGRINEAFDLLDTMRKQ-GVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+EP Y +++ S F++++ G+ P+
Sbjct: 431 ESLG---------------VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIV 475
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
++ + + G+ F ++ SG A ++TY ++++ + + G+++EA+ + M
Sbjct: 476 ACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEM 535
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ V L L GR ++A + +++ + + P +T+ L+ G
Sbjct: 536 SKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLA-PTVVTYNILLAGLGKEGQ 594
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
I + +F+ M H C PN T N +L +ND A ++F + T N
Sbjct: 595 IQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNC--------- 645
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+PD T+++++ +Q + +++ M +L + H L K
Sbjct: 646 ----RPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK----KLLRPDHVTLCTLLPGVIKSG 697
Query: 590 LLEHAF----DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
+E AF D + G F+ +++ + ++ EKA+
Sbjct: 698 QIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAI 739
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 17/270 (6%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ + Y L+ GK+G P +AL F M + + P+I A ++ +L ++G L E +
Sbjct: 438 TAYTYILLIDYHGKSGHPGKALETFEKM-KARGIAPNIVACNASLYSLAEMGRLGEAKAM 496
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++ L PD V YN ++ Q + ++ K +
Sbjct: 497 FNELKSSG---------------LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCE 541
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P ++ + ++G+ + + F +M + A +TY +L+ +EG+I +AV
Sbjct: 542 PDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+M G + L CLC N A+ + K+ ++ + +P +TF +I +
Sbjct: 602 FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTM-NCRPDVLTFNTIIHGFI 660
Query: 467 DGGHIDDCISIFQHMKDHCEPNIGTVNAML 496
I + I +F MK P+ T+ +L
Sbjct: 661 KQNQIKNAIWLFHQMKKLLRPDHVTLCTLL 690
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 29/235 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL G A + D + YG + + +Y L+ GK G A F
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCR-----PNSAIYNILVNGYGKLGHVDTACEFFKR 955
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M+++ + PD+ +Y + L G + + + E+++Q L+PD
Sbjct: 956 MVKE-GIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG---------------LDPD 999
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE--- 370
LV YN ++N S + + +F +++ G+ P TY ++L G ++ E
Sbjct: 1000 LVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYN---SLILNLGIVGMIEEAGK 1056
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+ ++ G TY L+R + G A + M G + +L
Sbjct: 1057 IYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 173/425 (40%), Gaps = 49/425 (11%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G WR+A+ VLD + K D ++ Y+ +A G A + A+ + M PD
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQN---YSSAIAACGNARQWERAVELLASMAAR-GTPPD 220
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y S +V KE V L+ M+ + K P+++VY+A ++A
Sbjct: 221 VLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVK---------------PNVIVYSAAISA 265
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
C QW+ + K++ GL P TY ++ + G+++ +M G
Sbjct: 266 CRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVAN 325
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+TY +++ A + G+ EAVA +R M++ GV Y G+W++A+ ++
Sbjct: 326 IITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLR 385
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 502
++ + P I++ +I + G + I + Q M+ H P++ +A + ++
Sbjct: 386 EMP-MEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQA 444
Query: 503 DMFSKAKELFEE----------------------TTRANSSGYTFLSGDGAPLKPDEYTY 540
+ +A L E T R+ + L PD TY
Sbjct: 445 SRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITY 504
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
S+++ + A QWE +++ M G D + ++ G E A D L
Sbjct: 505 SAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGG---WWEEALDVL-- 559
Query: 601 AGEIP 605
GE+P
Sbjct: 560 -GEMP 563
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 163/401 (40%), Gaps = 47/401 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ +G W A +L + K + + Y+ ++ K G+ EA+ + M
Sbjct: 297 VIDACAKRGQWEPAFRLL---MEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQ 353
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN------------MHR 303
E+ + PD+ Y S + G +E V L +R+ P + + R
Sbjct: 354 EN-GVAPDVITYSSTISACAKKGQWEEAVGL---LREMPMEGVTPNAISYGIVISACAKR 409
Query: 304 KNWDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
W ++ PD++ Y+A ++AC + +W+ W+ +++ +GL P+ +Y
Sbjct: 410 GRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISY 469
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
A++ ++G+ + E R+M G A +TY ++ + + EA+ R M++
Sbjct: 470 NSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQR 529
Query: 413 RGVV-GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+G+ S + C G W++A+ V+ ++ ++ P I++ I + G
Sbjct: 530 QGITPDVVSCNTAINAC-AQGGWWEEALDVLGEMPTM-GLVPDAISYRTAIDACAKGDRW 587
Query: 472 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ I + + M P+ + + S + ++ +A L +
Sbjct: 588 KEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVG----------- 636
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
L PD TY+S + A A +W+ + + M G D
Sbjct: 637 --LSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPD 675
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 19/246 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y+ ++A + EAL +F M + PD+ + ++ Q G +E + ++
Sbjct: 502 ITYSAVIASCAMGRQWEEALDLFREMQRQ-GITPDVVSCNTAINACAQGGWWEEALDVLG 560
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M P+ L PD + Y ++AC +WK + + +++ GL P
Sbjct: 561 EM---PTMG------------LVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPD 605
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A +Y AM G + R M G + +TY + A + G+ EA +R
Sbjct: 606 AISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLR 665
Query: 409 NMEQRGVVGTASVYYELACCLCNNG-RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M G+ + + A C NG +W A+ V+ ++++L S P E T+ + +
Sbjct: 666 QMPTFGLAPDVN-SFNAAIDACGNGDQWGTAVEVLFEMRALGVS-PNEATYLTAMYACKR 723
Query: 468 GGHIDD 473
G DD
Sbjct: 724 CGEKDD 729
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 160/384 (41%), Gaps = 20/384 (5%)
Query: 311 EPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
EPD +N ++N C+ K V V ++ ++G +P TY + + +SG L
Sbjct: 155 EPDTTTFNTLINGLCLEGKVSKAVVLV-DRMVENGCQPDMVTYNSIVNGICRSGDTSLAF 213
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ RKM + TY ++ + +G I+ A++ + ME +G+ + Y L L
Sbjct: 214 DMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C G+W D L+++ + S R P ITF L+ + G + + +++ M PN
Sbjct: 274 CKAGKWNDGALLLKDMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I T N ++ Y + S+A + + R S PD T++S+++
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-------------PDIVTFTSLIKGYC 379
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + V++ ++ G + ++ L+ ++GK L E F ++ G +P +
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
+ +L EKA+ + + + + +T + E K+E N
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG---MCKGGKVEDAWNLF 496
Query: 669 CNCNAASSEITVSNLSRALHALCR 692
C+ + V + + LC+
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCK 520
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 129/313 (41%), Gaps = 37/313 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR------FVYTKLLAILGKAGRPHEALR 249
L++GL G W +L +D+ SR + LL + K G+ EA
Sbjct: 269 LVRGLCKAGKWNDGALLL---------KDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-RQKPS------------- 295
++ M+ + P+I Y+++ L E +++ M R K S
Sbjct: 320 LYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 296 ---KRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
KR+ + + R L + V Y+ ++ S + K +F+++ G+ P
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TYG+ ++ + +GK + E F + KS +G + Y ++ + GK+ +A +
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ +GV Y + LC G +A +++ K++ + P + T+ LI + + G
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE-DGNAPNDCTYNTLIRAHLRDG 557
Query: 470 HIDDCISIFQHMK 482
+ + + MK
Sbjct: 558 DLTASAKLIEEMK 570
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 169/388 (43%), Gaps = 53/388 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++++LG+ G ++ IF
Sbjct: 112 VFKEFAQRGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFE 166
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + + +Y ++ + G+ G + ++L+ERM+++ + P
Sbjct: 167 EM-PTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEK---------------VTP 210
Query: 313 DLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
++ YN V+N+C W+G+ +F ++R G++P TY + G D
Sbjct: 211 SILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMV 270
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
FR M + G TY+ LV F + K+ + ++ ME G + S Y L +
Sbjct: 271 FRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYAS 330
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH--IDDCISIFQHMK-DHCEPN 488
G + AM V +++ R P +T++ L+ ++ GGH DD +F MK + EP+
Sbjct: 331 KGDIRHAMGVFRQMQEAR-CVPNAVTYSMLL--NLYGGHGRYDDVRELFLEMKVSNTEPD 387
Query: 489 IGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGY---TFLSGDGA---------- 531
+GT N +++V+ F + LF EE N Y + G G
Sbjct: 388 VGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILL 447
Query: 532 -----PLKPDEYTYSSMLEASATAHQWE 554
+ P Y+ ++EA A +E
Sbjct: 448 HMDEKGIVPSTKAYTGVIEAYGQAASYE 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 143/345 (41%), Gaps = 40/345 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y LL G EA +F M E + PDI Y ++ T G++ L+++ +L++
Sbjct: 249 ITYNTLLNACANRGLGDEAEMVFRTMNEG-GMVPDITTYRNLVETFGKLNKLEKVSELLK 307
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + PD+ YN +L A + VF+Q++++ P+
Sbjct: 308 EMESSGNL---------------PDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPN 352
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A TY + + + G+YD V E F +M S TY VL+ F E G E V
Sbjct: 353 AVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFH 412
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+M + V Y L G +DA ++ + + P +TG+I +
Sbjct: 413 DMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDE-KGIVPSTKAYTGVIEAYGQA 471
Query: 469 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS------ 521
++ + +F M + +P + T N+++ +++R ++ +++ + + + +
Sbjct: 472 ASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSF 531
Query: 522 -----GY-----------TFLSGDGAPLKPDEYTYSSMLEASATA 550
GY T++ + A +PDE T+ ++L TA
Sbjct: 532 NGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTA 576
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 168/422 (39%), Gaps = 33/422 (7%)
Query: 159 RVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
R LV+ + K + ++ M SG + LL+ KG R AM V
Sbjct: 287 RNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQ--- 343
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+++ R + + Y+ LL + G GR + +F L ++ N PD+ Y+ + G+ G
Sbjct: 344 MQEARCVPNAVTYSMLLNLYGGHGRYDDVRELF-LEMKVSNTEPDVGTYNVLIEVFGEGG 402
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
KE+V L M ++ +EP++ Y ++ AC + +
Sbjct: 403 YFKEVVTLFHDMVEEN---------------VEPNMGTYEGLIYACGKGGLHEDAKKILL 447
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+ + G+ PS Y +E Q+ Y+ F M + G TY L+ F G
Sbjct: 448 HMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGG 507
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
E+ A + M + GV + + G++++A+ +++ R +P E TF
Sbjct: 508 LYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARF-QPDERTF 566
Query: 459 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
++ G +D+ F+ ++ P++ M+ VY+R++ + A E+ +E
Sbjct: 567 EAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVT 626
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
S + G D+Y+ W+ EYV+ + GC L +
Sbjct: 627 NKVSNIHQVVGKMMKGDYDDYS------------NWQMVEYVFDKLNSEGCGLGMRFYNT 674
Query: 578 LL 579
LL
Sbjct: 675 LL 676
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 101/230 (43%), Gaps = 16/230 (6%)
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y +++ EG + ++ M GV + Y L +G+++ ++ ++E++K
Sbjct: 145 YTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMK 204
Query: 447 SLRHSKPLEITFTGLIISSMDGG-HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM 504
+ + P +T+ +I S GG + + +S+F M+ + +P+I T N +L + +
Sbjct: 205 KEKVT-PSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGL 263
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
+A+ +F N G + PD TY +++E ++ E + K M
Sbjct: 264 GDEAEMVFRTM---NEGG----------MVPDITTYRNLVETFGKLNKLEKVSELLKEME 310
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
SG D + + LL + G F + EA +P+ + ++ +L
Sbjct: 311 SSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLL 360
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 28/199 (14%)
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG--GHIDDCISIFQHMKDHCEP-NI 489
G WQ ++ + + ++ KP E +T II S+ G G ++ IF+ M H P ++
Sbjct: 120 GDWQRSLRLFKYMQRQIWCKPNEHIYT--IIISLLGREGLLEKSTEIFEEMPTHGVPRSV 177
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEE-------------TTRANSSGYTFLSGDG------ 530
+ A++ Y R+ + + EL E T NS L+ +G
Sbjct: 178 FSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFA 237
Query: 531 ----APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
++PD TY+++L A A + E V++ M G D T + L+ +
Sbjct: 238 EMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLN 297
Query: 587 KCHLLEHAFDSLLEAGEIP 605
K + + +G +P
Sbjct: 298 KLEKVSELLKEMESSGNLP 316
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 196/466 (42%), Gaps = 48/466 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLK L G W A+++L W + D + F ++ LG+ GR H+A+ +L
Sbjct: 118 LLKALELSGHWEWALALLRWARA-EGAADGPAPF--EMVVRALGREGR-HDAV---CALL 170
Query: 256 EDCNLYP----DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
++ L P D+ AY +V L + G + ++L + +R++ +
Sbjct: 171 DEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREG---------------VA 215
Query: 312 PDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P V YN VL+ W V + +R +G++P T A V+ +G+ LV E
Sbjct: 216 PTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGVEPDGFT---ASTVIAAAGRDGLVDE 272
Query: 371 ---FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
FF + G A +TY L++ F + G EA+ +R ME G A Y ELA
Sbjct: 273 AVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAG 332
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
G +Q+A ++ + + P T+ ++ + + G +D+ +++F M K+
Sbjct: 333 SYARAGFYQEAAKCIDTMIG-KGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFI 391
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P T N +L + + F+ E+ E +R SG T P+ T++++L
Sbjct: 392 PYTNTYNLVLGMLGKKSRFAAMLEMLGEMSR---SGCT----------PNRVTWNTLLAV 438
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
Y V +GM +L + + L+ R G +D + AG P
Sbjct: 439 CGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPC 498
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESN 652
+ +L Q ++ A ++++ M F + ++ L + +
Sbjct: 499 LTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCH 544
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 157/409 (38%), Gaps = 108/409 (26%)
Query: 224 DLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
DLK+R Y LL + GKAG EALR+ M ED PD Y+ +A + +
Sbjct: 279 DLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREM-EDAGCKPDAVTYNELAGSYARA 337
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G +E K I+ M K L P+ YN ++ A + + +F
Sbjct: 338 GFYQEAAKCIDTMIGKG---------------LLPNTFTYNTIMTAYGNAGKVDEALALF 382
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG------------------ 379
+++K+G P TY L + ++ + ++ + E +M++SG
Sbjct: 383 DRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKR 442
Query: 380 ----------EAIGAL-------TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
E + + TY L+ A+ G A M G + Y
Sbjct: 443 GMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTY 502
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI----- 477
L L G W A +V K+KS KP +++++ L+ GG+ +I
Sbjct: 503 NALLNVLSRQGDWTAARSIVSKMKS-EGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVY 561
Query: 478 ------------------------------FQHMKDHC-EPNIGTVNAMLKVYSRNDMFS 506
FQ +K +P++ +N+ML +Y++N ++S
Sbjct: 562 QGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYS 621
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ-WE 554
KA E+FE + L PD TY+S+++ A +++ WE
Sbjct: 622 KAMEMFESIEQLG-------------LSPDLITYNSLMDMYAKSNEPWE 657
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 76/443 (17%), Positives = 159/443 (35%), Gaps = 81/443 (18%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
K + M GL+ ++ G+ G +A+++ D +K + Y +L
Sbjct: 345 KCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDR---MKKNGFIPYTNTYNLVL 401
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
+LGK R L + M P+ ++++ G+ G+ + +++E M+
Sbjct: 402 GMLGKKSRFAAMLEMLGEM-SRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKV 460
Query: 296 KRIKNMHR----------------KNWDPV----LEPDLVVYNAVLNACVPSHQWKGVFW 335
+ ++ + K +D + P L YNA+LN W
Sbjct: 461 ELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARS 520
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ +++ G KP+ +Y L ++ + G + +++ + + + LV A +
Sbjct: 521 IVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANF 580
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS---- 451
+ ++ A + ++ RG + + NG + AM + E I+ L S
Sbjct: 581 KCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLI 640
Query: 452 ---------------------------------------KPLEITFTGLIISSMDGGHID 472
KP +++ +I G I
Sbjct: 641 TYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIK 700
Query: 473 DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ + M D P + T + ++ Y+ +MF++A+E+ GY
Sbjct: 701 EAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVV---------GYMIQR---- 747
Query: 532 PLKPDEYTYSSMLEASATAHQWE 554
LKP E TY ++++ A ++E
Sbjct: 748 KLKPMELTYRRVVDSYCRAKRYE 770
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 146/320 (45%), Gaps = 32/320 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLI 287
F ++ L++ GK+G EA+++F M + L P++ Y++V G+ G+ K +V++
Sbjct: 223 FAFSALISAYGKSGYFDEAIKVFESM-KVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIF 281
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + ++PD + YN++L C W+ +F ++ G+
Sbjct: 282 EEMLRNG---------------VQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQ 326
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY ++ + + G+ DL +E +M +TY + + + G++ +A+
Sbjct: 327 DVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLY 386
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M+ G+ Y L GR++DA+ V +++ S K + +T+ L+
Sbjct: 387 NEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDV-VTYNALLDGYGK 445
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G ++ +F+ M KD PN+ T + ++ VYS+ ++ +A E+F E +A
Sbjct: 446 QGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG------- 498
Query: 527 SGDGAPLKPDEYTYSSMLEA 546
LK D YS ++ A
Sbjct: 499 ------LKADVVLYSELINA 512
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELV 284
R Y LLA+ + G A +FN M+ D + D+ Y+++ + GQ+ L E+
Sbjct: 293 RITYNSLLAVCSRGGLWEAARNLFNEMI-DRGIDQDVFTYNTLLDAVCKGGQMDLAYEI- 350
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
M + P K+I P++V Y+ + + + + + ++ +++ G
Sbjct: 351 -----MLEMPGKKIL------------PNVVTYSTMADGYAKAGRLEDALNLYNEMKFLG 393
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ +Y + + + G+++ + ++M SG +TY L+ + ++GK NE
Sbjct: 394 IGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVT 453
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ M++ V Y L +++AM V + K K + ++ LI +
Sbjct: 454 RVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQ-AGLKADVVLYSELINA 512
Query: 465 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 502
G +D + + M K+ PN+ T N+++ + R+
Sbjct: 513 LCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM-FSKAKELFE 513
F+ LI + G+ D+ I +F+ MK +PN+ T NA++ + + F + E+FE
Sbjct: 223 FAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFE 282
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
E R ++PD TY+S+L + WE ++ M G D
Sbjct: 283 EMLRNG-------------VQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVF 329
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ LL + G+ L A++ +L E+P ++ + + Y KA L +A+
Sbjct: 330 TYNTLLDAVCKGGQMDL---AYEIML---EMPGKKILPNVVTYSTMADGYAKAGRLEDAL 383
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 99/261 (37%), Gaps = 17/261 (6%)
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVML-QSGKYDLVHEFFRKMAKSGEAIGALTYK 388
WK + L + G K AM L + GK +L F G +
Sbjct: 167 WKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFS 226
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ A+ + G +EA+ +M+ G+ V Y C G + +V + L
Sbjct: 227 ALISAYGKSGYFDEAIKVFESMKVSGLKPNL-VTYNAVIDACGKGGVEFKRVVEIFEEML 285
Query: 449 RHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
R+ +P IT+ L+ GG + ++F M D + ++ T N +L +
Sbjct: 286 RNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMD 345
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
A E+ E G + P+ TYS+M + A A + E +Y M
Sbjct: 346 LAYEIMLEMP-------------GKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL 392
Query: 567 GCQLDQTKHAWLLVEASRAGK 587
G LD+ + LL ++ G+
Sbjct: 393 GIGLDRVSYNTLLSIYAKLGR 413
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 16/127 (12%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
K Y LL GK G+ +E R+F M +D ++P++ Y ++ + L +E ++
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKD-RVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ +Q L+ D+V+Y+ ++NA + + ++ K G+
Sbjct: 490 VFREFKQAG---------------LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGI 534
Query: 346 KPSAATY 352
+P+ TY
Sbjct: 535 RPNVVTY 541
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 146/320 (45%), Gaps = 32/320 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLI 287
F ++ L++ GK+G EA+++F M + L P++ Y++V G+ G+ K +V++
Sbjct: 223 FAFSALISAYGKSGYFDEAIKVFESM-KVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIF 281
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + ++PD + YN++L C W+ +F ++ G+
Sbjct: 282 EEMLRNG---------------VQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQ 326
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY ++ + + G+ DL +E +M +TY + + + G++ +A+
Sbjct: 327 DVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLY 386
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M+ G+ Y L GR++DA+ V +++ S K + +T+ L+
Sbjct: 387 NEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDV-VTYNALLDGYGK 445
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G ++ +F+ M KD PN+ T + ++ VYS+ ++ +A E+F E +A
Sbjct: 446 QGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG------- 498
Query: 527 SGDGAPLKPDEYTYSSMLEA 546
LK D YS ++ A
Sbjct: 499 ------LKADVVLYSELINA 512
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELV 284
R Y LLA+ + G A +FN M+ D + D+ Y+++ + GQ+ L E+
Sbjct: 293 RITYNSLLAVCSRGGLWEAARNLFNEMI-DRGIDQDVFTYNTLLDAVCKGGQMDLAYEI- 350
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
M + P K+I P++V Y+ + + + + + ++ +++ G
Sbjct: 351 -----MLEMPGKKIL------------PNVVTYSTMADGYAKAGRLEDALNLYNEMKFLG 393
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ +Y + + + G+++ + ++M SG +TY L+ + ++GK NE
Sbjct: 394 IGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVT 453
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ M++ V Y L +++AM V + K K + ++ LI +
Sbjct: 454 RVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQ-AGLKADVVLYSELINA 512
Query: 465 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 502
G +D + + M K+ PN+ T N+++ + R+
Sbjct: 513 LCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 458 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM-FSKAKELFEET 515
F+ LI + G+ D+ I +F+ MK +PN+ T NA++ + + F + E+FEE
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
R ++PD TY+S+L + WE ++ M G D +
Sbjct: 285 LRNG-------------VQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTY 331
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
LL + G+ L A++ +L E+P ++ + + Y KA L +A+
Sbjct: 332 NTLLDAVCKGGQMDL---AYEIML---EMPGKKILPNVVTYSTMADGYAKAGRLEDAL 383
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 99/261 (37%), Gaps = 17/261 (6%)
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVML-QSGKYDLVHEFFRKMAKSGEAIGALTYK 388
WK + L + G K AM L + GK +L F G +
Sbjct: 167 WKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFS 226
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ A+ + G +EA+ +M+ G+ V Y C G + +V + L
Sbjct: 227 ALISAYGKSGYFDEAIKVFESMKVSGLKPNL-VTYNAVIDACGKGGVEFKRVVEIFEEML 285
Query: 449 RHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
R+ +P IT+ L+ GG + ++F M D + ++ T N +L +
Sbjct: 286 RNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMD 345
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
A E+ E G + P+ TYS+M + A A + E +Y M
Sbjct: 346 LAYEIMLEMP-------------GKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL 392
Query: 567 GCQLDQTKHAWLLVEASRAGK 587
G LD+ + LL ++ G+
Sbjct: 393 GIGLDRVSYNTLLSIYAKLGR 413
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 16/127 (12%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
K Y LL GK G+ +E R+F M +D ++P++ Y ++ + L +E ++
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKD-RVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ +Q L+ D+V+Y+ ++NA + + ++ K G+
Sbjct: 490 VFREFKQAG---------------LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGI 534
Query: 346 KPSAATY 352
+P+ TY
Sbjct: 535 RPNVVTY 541
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 198/485 (40%), Gaps = 42/485 (8%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L + K L +G RQ +VL+ ++ + + + Y L+ +L ++G EAL ++
Sbjct: 161 LTIFKALSIRGGLRQMTTVLN---KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRR 217
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVKLIER-------------MRQK 293
M+ + L P + Y ++ V LG+ + LLKE+ L R R
Sbjct: 218 MVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ R+ D PDLV Y +++A + Q + +F +++ +G KP Y
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYI 336
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
++ G D EF+ +M G +T+ +LV + +EA A M ++
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G++ Y L C L GR +DA+ +++ ++S+ +P T+ I G
Sbjct: 397 GILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV-GVQPTAYTYITFIDYFGKSGETGK 455
Query: 474 CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ F+ MK PNI NA L + +AK +F R N
Sbjct: 456 AVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF-NGLRENG------------ 502
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
L PD TY+ M++ + Q + + M +GC+ D L+ +AG+
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY---APFHITERQWTELF 649
FD + + P + + +L + +KA+ L +M +P I+ + F
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Query: 650 ESNED 654
N++
Sbjct: 623 CKNDE 627
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 135/318 (42%), Gaps = 30/318 (9%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD ++ + G+ G + EL +L + M S+R K PD + YN V+
Sbjct: 821 PDAFTFNMLLAVHGKSGKITELFELYKEM---ISRRCK------------PDAITYNIVI 865
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
++ S+ F L S +P+ TYG ++ + + G+ + F +M+ G
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+ +L+ + + G A + M G+ Y L CLC GR +A+
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
++KS P I + +I +++ ++++ M++ P++ T N+++
Sbjct: 986 FNELKS-TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
M +AK ++EE A L+PD +TY++++ + + E+ VY
Sbjct: 1045 LAGMVEQAKRMYEELQLAG-------------LEPDVFTYNALIRGYSLSENPEHAYTVY 1091
Query: 561 KGMALSGCQLDQTKHAWL 578
K M + GC + +A L
Sbjct: 1092 KNMMVDGCNPNIGTYAQL 1109
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 157/383 (40%), Gaps = 25/383 (6%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+ + +LVD L + + + +M + G++ L+ GL G A+
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+LD + + + + + Y + GK+G +A+ F M + P+I A ++
Sbjct: 423 KLLDTMESVGVQ---PTAYTYITFIDYFGKSGETGKAVETFEKMKAK-GIVPNIVACNAS 478
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+L ++G L+E +K + N R+N L PD V YN ++ Q
Sbjct: 479 LYSLAEMGRLRE------------AKTMFNGLRENG---LAPDSVTYNMMMKCYSKVGQV 523
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ ++ ++G +P ++ + ++G+ D + F +M + +TY L
Sbjct: 524 DEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTL 583
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ +EG++ +A+ +M + + L C C N + A+ + K+ ++
Sbjct: 584 LSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM-TVMD 642
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML----KVYSRNDMFS 506
KP +T+ +I + ++ F +K P+ T+ +L K D S
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAIS 702
Query: 507 KAKE-LFEETTRANSSGYTFLSG 528
A++ +++ R N S + L G
Sbjct: 703 IARDFMYQVRFRVNRSFWEDLMG 725
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 133/332 (40%), Gaps = 21/332 (6%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ L E T K W + M G LL G G + + + +
Sbjct: 794 LIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR 853
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K D Y +++ L K+ +AL F ++ + P Y + L +VG L
Sbjct: 854 CKPD---AITYNIVISSLAKSNNLDKALDFFYDLVSS-DFRPTPRTYGPLIDGLAKVGRL 909
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+E ++L E M K P+ ++N ++N + +FK++
Sbjct: 910 EEAMRLFEEMSDYGCK---------------PNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
G++P +Y + ++ + +G+ D +F ++ +G + Y ++ + ++
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
EA+A M RG+V Y L L G + A + E+++ L +P T+
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ-LAGLEPDVFTYNA 1073
Query: 461 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGT 491
LI + + +++++M D C PNIGT
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 127/325 (39%), Gaps = 15/325 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P L YN ++ + H + + +FK ++ G P A T+ + + V +SGK +
Sbjct: 784 ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E +++M A+TY +++ + + +++A+ ++ T Y L L
Sbjct: 844 ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
GR ++AM + E++ S KP F LI G + +F+ M + P+
Sbjct: 904 AKVGRLEEAMRLFEEM-SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + ++ D A R + + Y F L PD Y+ ++
Sbjct: 963 LKSYTILV------DCLCLAG-------RVDEALYYFNELKSTGLDPDFIAYNRIINGLG 1009
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + E +Y M G D + L++ AG + ++ L AG P
Sbjct: 1010 KSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVF 1069
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM 633
+ ++ + N E A + M
Sbjct: 1070 TYNALIRGYSLSENPEHAYTVYKNM 1094
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 106/279 (37%), Gaps = 23/279 (8%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+R + +A +++ L++ K F + S T L+ GL G +
Sbjct: 852 RRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEE 911
Query: 209 AMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
AM + + + YG K + ++ L+ GK G A ++F M+ + + PD+ +
Sbjct: 912 AMRLFEEMSDYGCK-----PNCAIFNILINGYGKIGDTETACQLFKRMVNE-GIRPDLKS 965
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y + L G + E + ++ L+PD + YN ++N
Sbjct: 966 YTILVDCLCLAGRVDEALYYFNELKSTG---------------LDPDFIAYNRIINGLGK 1010
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
S + + ++ ++R G+ P TY M + +G + + ++ +G T
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
Y L+R + A +NM G Y +L
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 179/417 (42%), Gaps = 40/417 (9%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ S Y +L L A A R F+ ML D + P++ Y+ + L G KE +
Sbjct: 153 VPSVLAYNAVLLALSDASLT-SARRFFDSMLSD-GVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
++ MR P++V YN ++ A + + G + +R+ G
Sbjct: 211 SILRDMRGAGCG---------------PNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG 255
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
LKP+ T+ + M ++GK + + F +M + G A ++Y LV + + G +EA+
Sbjct: 256 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEAL 315
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ M Q+G++ + L +C G + A+ +V +++ R + E+TFT LI
Sbjct: 316 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRE-RGLQMNEVTFTALIDG 374
Query: 465 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G +DD + + MK +P++ NA++ Y +A+EL E
Sbjct: 375 FCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM-------- 426
Query: 524 TFLSGDGAPLKPDEYTYSSMLEA-SATAHQWEYFEYVYKGMALSGCQLDQTKHAWL---L 579
+ LKPD TYS+++ A FE + + M G D ++ L L
Sbjct: 427 -----EAKGLKPDVVTYSTIISAYCKNCDTHSAFE-LNQQMLEKGVLPDAITYSSLIRVL 480
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
R H+L F ++++ G P +T ++ + N E A++L + M A
Sbjct: 481 CGEKRLSDAHVL---FKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA 534
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 22/274 (8%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M Q G+M L+ + G+ +A+++ V ++++ + +T L+ K
Sbjct: 321 MTQKGIMPDVVTFTSLIHVMCKAGNLERAVTL---VRQMRERGLQMNEVTFTALIDGFCK 377
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G +AL M + C + P + Y+++ VG + E +L+ M K
Sbjct: 378 KGFLDDALLAVRGM-KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG------ 430
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
L+PD+V Y+ +++A + F + +Q+ + G+ P A TY + V+
Sbjct: 431 ---------LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC 481
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ H F+ M K G TY L+ +EG + A++ M + GV+
Sbjct: 482 GEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVV 541
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
Y L L + R +A ++ K L H P+
Sbjct: 542 TYSVLINGLSKSARAMEAQQLLFK---LYHEDPI 572
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 14/200 (7%)
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P T+ L+ + GH + +SI + M+ C PN+ T N ++ + R A+ L
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 247
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
LKP+ T++SM+ A + E V+ M G D
Sbjct: 248 VGMMREGG-------------LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPD 294
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
+ L+ +AG H F + + G +P + FT ++ N E+AV L+
Sbjct: 295 GVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVR 354
Query: 632 AMAYAPFHITERQWTELFES 651
M + E +T L +
Sbjct: 355 QMRERGLQMNEVTFTALIDG 374
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 91/237 (38%), Gaps = 24/237 (10%)
Query: 167 EREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK 226
ER +T VR M + GL E L+ G KG A L V G+K R
Sbjct: 347 ERAVT-----LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA---LLAVRGMKQCRIKP 398
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y L+ GR EA + + M E L PD+ Y ++ + +L
Sbjct: 399 SVVCYNALINGYCMVGRMDEARELLHEM-EAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 457
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++M +K + PD + Y++++ + +FK + K GL+
Sbjct: 458 NQQMLEKG---------------VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQ 502
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
P TY ++ + G + KM K+G +TY VL+ + + EA
Sbjct: 503 PDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEA 559
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 162/407 (39%), Gaps = 31/407 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ L K GR EA+R+ M L D+ Y ++ G L L +
Sbjct: 46 FTYCILMDGLCKEGRVEEAMRLLGEMKRK-GLEVDVVVYSTLISGFCSKGCLDRGKALFD 104
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K + P++VVY+ ++N W+ V + + G++P
Sbjct: 105 EMLEKG---------------ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPD 149
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + + G+ + F M + GE +TY VL+ +EG I +A
Sbjct: 150 VYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFE 209
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMD 467
M ++G Y L LCNNG+ +AM L ++ + +P ITF +I
Sbjct: 210 TMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCK 269
Query: 468 GGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +D + I+ M + N+ T + ++ Y ++ + KA EL++ R + G
Sbjct: 270 EGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWK---RVHKLG---- 322
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
L P TYS M++ H + + ++ M +SG + L+ +
Sbjct: 323 ------LVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKES 376
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
F + E+ P + F M+ + + A L+N M
Sbjct: 377 SLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 163/387 (42%), Gaps = 36/387 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G KG WR+A +VL + + ++ + YT ++ L K GR +AL +F+LM
Sbjct: 121 LINGFCKKGLWREATAVL---HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT 177
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E P Y+ + L + G + + K+ E M +K KR+ ++V
Sbjct: 178 EK-GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEK-GKRL--------------EVV 221
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSG--LKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
YN ++ + + +F L + G ++P T+ ++ + + G+ D E +
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYD 281
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
M + G T +L+ + + G I++A+ + + + G+V +++ Y + C
Sbjct: 282 TMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMH 341
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 492
A + ++K + P + L+ S ++ +FQ MK+ +CEP+ +
Sbjct: 342 MLNFAKGLFSRMK-ISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISF 400
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N M+ + AKEL + + L PD YTYSS + + Q
Sbjct: 401 NIMIDGTLKAGDIHSAKELLNDMQQMG-------------LTPDAYTYSSFINRLSKLGQ 447
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLL 579
E + + M SG D + L+
Sbjct: 448 MEEAKGAFDSMIASGITPDNHVYDSLI 474
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 123/293 (41%), Gaps = 15/293 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+V YN ++N + + + ++ S +P++ TY + M+ + + G+ +
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M + G + + Y L+ F +G ++ A M ++G+ VY L C
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIG 490
G W++A V+ + R +P T+T +I G + +F M + EP+
Sbjct: 128 KGLWREATAVLHTMTE-RGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186
Query: 491 T----VNAMLKVYSRNDMFSKAKELFEETTRANSSGY-TFLSGDGAPLKPDEYT--YSSM 543
T +N + K D F + + E+ R Y T + G K DE +SS+
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246
Query: 544 LE-ASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVEASRAGK---CHLL 591
LE + F V +G+ G +LD+ + ++E G CH+L
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEG-RLDKAVEIYDTMIERGSFGNLFTCHIL 298
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 117/297 (39%), Gaps = 17/297 (5%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+++ + P +Y + + + + + + +M S + TY +L+ +EG+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ EA+ + M+++G+ VY L C+ G + +++ + P + ++
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLE-KGISPNVVVYS 119
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI G + ++ M + +P++ T M+ ++ KA +LF+ T
Sbjct: 120 CLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
+P TY+ ++ +++ M G +L+ + L
Sbjct: 180 GE-------------EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTL 226
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT-EMLIQAIV-QSNYEKAVALINAM 633
++ GK F SLLE G P T +IQ + + +KAV + + M
Sbjct: 227 IMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM 283
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L P + Y+++ +L + L++ +L + M++ EPD + +N
Sbjct: 358 LSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNC---------------EPDTISFNI 402
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++ + + + +++ GL P A TY + + + G+ + F M SG
Sbjct: 403 MIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASG 462
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
Y L++ F +I E + +R M GV+ + + LCN+ M
Sbjct: 463 ITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVM 522
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 176/376 (46%), Gaps = 28/376 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKL-LKGLGDKGSWRQAMSVLDWVYGL 219
++D L ++ T K + +R+M Q G+ + + + + G A S+L+ +
Sbjct: 184 VMDGLCKKGHTQKAFDLLRLMEQ-GITKPDTCIYNIVIDAFCKDGMLDGATSLLNE---M 239
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K K YT L+ LGK + E +R L + N+YPD+ ++SV L + G
Sbjct: 240 KQKNIPPDIITYTSLIDGLGKLSQ-WEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGK 298
Query: 280 LKELVKLIERMRQK---PSKRIKNM-------------HRKNWDPVL----EPDLVVYNA 319
+++ +++ M +K P++ N+ R+ +D ++ EPD++ Y A
Sbjct: 299 VEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTA 358
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++N V + +F+++ ++GLKPS T + + + + G+ + FF +M +G
Sbjct: 359 LINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAG 418
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
T+ L+ +++ G + EA++ +E+R +Y + LC NG+ A
Sbjct: 419 HIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAH 478
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
EK+ L P IT+T +I G +D+ + + M+D+ C P+ T N +++
Sbjct: 479 ATFEKL-PLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRG 537
Query: 499 YSRNDMFSKAKELFEE 514
+ R+ S+ K +E
Sbjct: 538 FFRSSKVSEMKAFLKE 553
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 138/346 (39%), Gaps = 27/346 (7%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMEVM 359
+H K P E V + ++ ++ K +FK+L R++ +P YG M+ +
Sbjct: 132 IHFKKGIPYNE---VTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGL 188
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ G + R M + Y +++ AF ++G ++ A + + M+Q+ +
Sbjct: 189 CKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDI 248
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y L L +W+ + ++ L + P TF +I G ++D I
Sbjct: 249 ITYTSLIDGLGKLSQWEKVRTLFLEMIHL-NIYPDVCTFNSVIDGLCKEGKVEDAEEIMT 307
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
+M + EPN T N ++ Y +A+ +F+ ++PD
Sbjct: 308 YMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKG-------------IEPDII 354
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
+Y++++ + + +++ ++ +G + + LL G+ + FD +
Sbjct: 355 SYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEM 414
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
AG IP+ + + Y K + AM++ FH ER+
Sbjct: 415 QAAGHIPN------LYTHCTLLGGYFKNGLVEEAMSH--FHKLERR 452
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 128/325 (39%), Gaps = 16/325 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P V ++ +L A V + V +F+++ K + A + + DL
Sbjct: 70 PSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSV 129
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLC 430
K G +T+ L+R + E K+ +AV + + + + V Y LC
Sbjct: 130 LAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLC 189
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 489
G Q A ++ ++ +KP + +I + G +D S+ MK + P+I
Sbjct: 190 KKGHTQKAFDLL-RLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDI 248
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T +++ + + K + LF E N + PD T++S+++
Sbjct: 249 ITYTSLIDGLGKLSQWEKVRTLFLEMIHLN-------------IYPDVCTFNSVIDGLCK 295
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ E E + M G + ++ + ++ G+ FDS+++ G P +
Sbjct: 296 EGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIIS 355
Query: 610 FTEMLIQAIVQSNYEKAVALINAMA 634
+T ++ + + +KA+ L ++
Sbjct: 356 YTALINGYVEKKKMDKAMQLFREIS 380
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/362 (17%), Positives = 138/362 (38%), Gaps = 14/362 (3%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F +F+Q+ + PSA ++ ++ ++ Y V FR++ K + A +V +
Sbjct: 57 FSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNS 116
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ + + + ++G+ + L L + +DA+ + +K+ +P
Sbjct: 117 CCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEP 176
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
E+ + ++ GH + + M+ +P+ N ++ + ++ M A L
Sbjct: 177 DEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLL 236
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
E + N + PD TY+S+++ QWE ++ M D
Sbjct: 237 NEMKQKN-------------IPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDV 283
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
++ + GK E ++E G P+ + + ++ ++ +A + ++
Sbjct: 284 CTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDS 343
Query: 633 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
M +T L ++ DK +L + S +T S L R L + R
Sbjct: 344 MIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGR 403
Query: 693 SE 694
+E
Sbjct: 404 TE 405
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 111/290 (38%), Gaps = 34/290 (11%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
K + R+N + EPD V+Y V++ C H K F + + + + KP Y + ++
Sbjct: 166 KKLVREN---ICEPDEVMYGTVMDGLCKKGHTQKA-FDLLRLMEQGITKPDTCIYNIVID 221
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+ G D +M + +TY L+ + + + M +
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYP 281
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK---PLEITFTGLIISSMDG----GH 470
+ + LC G+ +DA E+I + K P EIT+ + MDG G
Sbjct: 282 DVCTFNSVIDGLCKEGKVEDA----EEIMTYMIEKGVEPNEITYNVV----MDGYCLRGQ 333
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ IF M D EP+I + A++ Y KA +LF E +S +
Sbjct: 334 MGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFRE-----------ISQN 382
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
G LKP T S +L + E + + M +G + H LL
Sbjct: 383 G--LKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLL 430
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+ ++ +Y AV+N + + F++L GL P TY + Q G D +
Sbjct: 455 DTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
RKM +G TY V+VR F+ K++E A ++ +
Sbjct: 515 MLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEI 554
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 165/391 (42%), Gaps = 20/391 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P+ V +N +++ ++ + ++ G +P TYG+ + + + G DL
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
KM + G L Y ++ + +++A+ + ME +G+ Y L CLC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
N GRW DA ++ + R P TF+ LI + + G + + ++ M K +P+I
Sbjct: 303 NYGRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++++ + +D +AK++FE S + F PD TY+++++
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMV----SKHCF---------PDVVTYNTLIKGFCK 408
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ E V++ M+ G + + L+ +AG C + + F ++ G P+ +
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 669
+ +L EKA+ + + + T + + E K+E + C
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG---MCKAGKVEDGWDLFC 525
Query: 670 NCNAASSEITVSNLSRALHALCR--SEKERD 698
N + + V + + CR S++E D
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 160/433 (36%), Gaps = 68/433 (15%)
Query: 243 RPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
+ EA+ + + M+ + C PD+ Y V L + G L+ +M Q
Sbjct: 201 KASEAMALIDRMVAKGCQ--PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK------- 251
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
LEP +++YN +++ +FK++ G++P+ TY + +
Sbjct: 252 --------LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
G++ M + T+ L+ AF +EGK+ EA M +R + +
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y L C + R +A + E + S +H P +T+ LI +++ + +F+ M
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 482 ------------------------------------KDHCEPNIGTVNAMLKVYSRNDMF 505
D PNI T N +L +N
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
KA +FE R+ ++P YTY+ M+E A + E ++ ++L
Sbjct: 483 EKAMVVFEYLQRSK-------------MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G + D + ++ R G + F + E G +P+ + ++ + + E
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Query: 626 AVALINAMAYAPF 638
+ LI M F
Sbjct: 590 SAELIKEMRSCGF 602
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 122/272 (44%), Gaps = 24/272 (8%)
Query: 222 KRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS----------- 269
KR + V Y+ L+ R EA ++F M+ + +PD+ Y++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK-HCFPDVVTYNTLIKGFCKYKRV 412
Query: 270 -----VAVTLGQVGLLKELVK---LIERMRQKPSKRI-KNMHRKNWDPVLEPDLVVYNAV 320
V + Q GL+ V LI+ + Q + + + ++ + P+++ YN +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
L+ + + + VF+ L++S ++P+ TY + +E M ++GK + + F ++ G
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ Y ++ F +G EA A + M++ G + + Y L +G + +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
++++++S + + + GL+ + + G +D
Sbjct: 593 LIKEMRSCGFAG--DASTIGLVTNMLHDGRLD 622
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 17/210 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +AG A IF M+ D + P+I Y+++ L + G L++ + + E +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EP + YN ++ + + + + +F L G+KP
Sbjct: 493 QRSK---------------MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + + G + F++M + G + Y L+RA +G + ++ M
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAML 440
G G AS L + ++GR + L
Sbjct: 598 RSCGFAGDAST-IGLVTNMLHDGRLDKSFL 626
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 100/243 (41%), Gaps = 15/243 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P ++ ++ +L+A +++ V + +Q++ G+ + TY + + + + L
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K G +T L+ + +I+EAVA V M G + L L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+ + +AM +++++ + + +P +T+ ++ G D ++ M + EP +
Sbjct: 199 HNKASEAMALIDRMVA-KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
N ++ + A LF+E + ++P+ TYSS++
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEM-------------ETKGIRPNVVTYSSLISCLCNY 304
Query: 551 HQW 553
+W
Sbjct: 305 GRW 307
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/506 (21%), Positives = 205/506 (40%), Gaps = 42/506 (8%)
Query: 116 LKEMFEKDLNWVLDDDVQLGSDYFA----KNVEWHPEKRWRSEAE-AIRVLVDRLSEREM 170
+KEM EK ++ D G + + VE+ P ++S E L+
Sbjct: 485 IKEMVEKGGECIISRDSNAGHEGTIEGADRTVEY-PSLGFKSLGEITYNTLMSAFIHNGH 543
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
+ K + +M + + T L+ GLG G +A+S+L + +K+ + V
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM----EKQGCEPSVV 599
Query: 231 -YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ L+A K + E+L +F+ M+ D++ Y V L + + + + + R
Sbjct: 600 TYSSLMASFYKRDQEEESLSLFDEMVRK-GCVADVSTYSLVINCLCKSDDVDQALDVFGR 658
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+++ +EP L Y +L++ V + +F +L++S L P
Sbjct: 659 MKEEG---------------MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDT 703
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y + + +++S + D + M TY L+ + G++ EA
Sbjct: 704 FVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTK 763
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + G Y L L G+ A+++ + R P +T++ LI S G
Sbjct: 764 MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR-CVPDVVTYSSLIDSLGKEG 822
Query: 470 HIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+++ F++ + C PN+G ++++ + + M +A ELFEE R
Sbjct: 823 RVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCP------- 875
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
P+ TY+++L A A + E + + M GC D + L+ + G
Sbjct: 876 ------PNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMV 929
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEML 614
E F + E G +P + FT ++
Sbjct: 930 DEAESYFKRMKEKGIVPDVITFTSLI 955
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 185/417 (44%), Gaps = 38/417 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GLG G A + +KD+ + + Y ++++LGKAGR EA ++F+ +
Sbjct: 398 LIDGLGKAGEADMACGLFKE---MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLK 454
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR--------KNWD 307
E PD+ Y+++ LG+ G + +++ +I+ M +K + I + + D
Sbjct: 455 EQ-GAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGAD 513
Query: 308 PVLE-PDL-------VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+E P L + YN +++A + + + + ++K P+ TY ++ +
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGL 573
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++G+ D R+M K G +TY L+ +F++ + E+++ M ++G V
Sbjct: 574 GKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADV 633
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
S Y + CLC + A+ V ++K +PL + L+ S + ID + IF
Sbjct: 634 STYSLVINCLCKSDDVDQALDVFGRMKE-EGMEPLLGNYKTLLSSLVKDEKIDFALQIFN 692
Query: 480 HMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
+++ P+ N M+ +++ +A +L + N + PD +
Sbjct: 693 ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQN-------------ILPDLF 739
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
TY+S+L+ + + E ++ M G + D + L+ + GK L HA
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK---LSHAL 793
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 130/587 (22%), Positives = 237/587 (40%), Gaps = 65/587 (11%)
Query: 67 MFRRAVAAKSGDPLV---GKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKD 123
M +R A+ D +V W+ R+ L S + F N N+ E+F +
Sbjct: 188 MIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTN----NVSGALEIFNQM 243
Query: 124 -----------LNWVLDDDVQLGSDYFAKNVEWHPEKRWR--SEAEAIRVLVDRLSEREM 170
N+VL+ V+ G Y + + + ++R +A+ R+ V +
Sbjct: 244 KSFGCNPSTNMYNFVLELLVK-GGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGR 302
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
+ ++ M +SG+ L+ L G+ +A + G+K+ R +
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFN---GMKNLRCSPNVVT 359
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L KAGR EA +F M E+ N PD AY+++ LG+ G L + M
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMKEN-NCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ D L P+L YN +++ + + + +F L++ G P
Sbjct: 419 K---------------DRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVF 463
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMA-KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY ++V+ + G+ D V ++M K GE I + EG I A V
Sbjct: 464 TYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNA-----GHEGTIEGADRTVE- 517
Query: 410 MEQRGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
G + Y L +NG +A+ ++E +K P +T+T L+
Sbjct: 518 YPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKK-HECIPTVVTYTTLVDGLGKA 576
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G +D+ +S+ + M K CEP++ T ++++ + + D ++ LF+E R
Sbjct: 577 GRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVA----- 631
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
D TYS ++ + + V+ M G + + LL + K
Sbjct: 632 --------DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK 683
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAM 633
F+ L E+ +P F +++ +V+SN ++A L+++M
Sbjct: 684 IDFALQIFNELQESSLVPDT-FVYNIMVNGLVKSNRVDEACKLVDSM 729
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 155/376 (41%), Gaps = 31/376 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL+ L K + AL+IFN L++ +L PD Y+ + L + + E KL++ M
Sbjct: 671 YKTLLSSLVKDEKIDFALQIFN-ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM 729
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + + PDL Y ++L+ S + + F +F ++ + G +P
Sbjct: 730 KNQN---------------ILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVV 774
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y M+V+ + GK FR MAK +TY L+ + +EG++ EA N
Sbjct: 775 AYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENS 834
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+G VY L G A+ + E+++ R P +T+ L+ G
Sbjct: 835 ISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR-RQCPPNIVTYNNLLSGLAKAGR 893
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
++ + + M K C P++ T N ++ + M +A+ F+ R G
Sbjct: 894 LNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFK---RMKEKG------- 943
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+ PD T++S++E+ + ++ M G + L+ RAGK H
Sbjct: 944 ---IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVH 1000
Query: 590 LLEHAFDSLLEAGEIP 605
F + G +P
Sbjct: 1001 EAAMIFHEMKVKGCMP 1016
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 159/391 (40%), Gaps = 23/391 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +YN VL V + VF +L + ++P A T+ + + +SG+ D E
Sbjct: 250 PSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEP 309
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
++M KSG G T+ VL+ A + G I+EA M+ Y L L
Sbjct: 310 IQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAK 369
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
GR ++A V ++K + P I + LI G D +F+ MKD PN+
Sbjct: 370 AGRLEEACEVFVEMKE-NNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLR 428
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N M+ V + +A +LF + L GA PD +TY+++++
Sbjct: 429 TYNIMISVLGKAGRQPEAWQLFHD-----------LKEQGAV--PDVFTYNTLIDVLGKG 475
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
Q + + K M G + ++ + E + G +E+ GEI +
Sbjct: 476 GQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITY---- 531
Query: 611 TEMLIQAIVQSNY-EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 669
L+ A + + + ++AV L+ M T +T L + D+ LL +
Sbjct: 532 -NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590
Query: 670 NCNAASSEITVSNLSRALHALCRSEKERDLS 700
S +T S+L + + R ++E LS
Sbjct: 591 KQGCEPSVVTYSSLMASFYK--RDQEEESLS 619
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 155/410 (37%), Gaps = 59/410 (14%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW--DPVLEPDLVVYNA 319
P+I+ +V + G LK++ +I R R+ ++ K + R + +P L D+VV
Sbjct: 102 PEISNLEAVERSGGDKFKLKKINGVIRR-RKWDAEMGKQLERLKFKLNPGLVCDVVVNQK 160
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
L+ W G ++ G + TY L ++ + + + D V + M K G
Sbjct: 161 DLHLAKCFFTWAG--------QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEG 212
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
I L+R F ++ A+ M+ G + ++Y + L G + A+
Sbjct: 213 HRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAV 272
Query: 440 LVVEKIKSLR------------HS----------------------KPLEITFTGLIISS 465
+V K+ R HS P TFT LI +
Sbjct: 273 IVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDAL 332
Query: 466 MDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ G+ID+ F MK+ C PN+ T ++ ++ +A E+F E N S
Sbjct: 333 VKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCS--- 389
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
PD Y+++++ A + + ++K M G + + ++ +
Sbjct: 390 ----------PDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGK 439
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
AG+ F L E G +P + ++ +K +A+I M
Sbjct: 440 AGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMV 489
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 101/246 (41%), Gaps = 21/246 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+KR + L+D L + + + F G G L+ G KG
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860
Query: 208 QAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+A+ + + + +R V Y LL+ L KAGR + A ++ M E PD+
Sbjct: 861 RALELFEEM----QRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM-EKVGCVPDLVT 915
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+ + +G++G++ E +RM++K + PD++ + +++ +
Sbjct: 916 YNILIDGVGKMGMVDEAESYFKRMKEKG---------------IVPDVITFTSLIESLGK 960
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ +F + + G PS TY + ++++ ++GK F +M G +T
Sbjct: 961 VDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020
Query: 387 YKVLVR 392
++ R
Sbjct: 1021 IGIMKR 1026
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 166/391 (42%), Gaps = 20/391 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P+ V +N +++ ++ + ++ G +P TYG+ + + + G DL
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFI 242
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
KM + G L Y ++ + +++A+ + ME +G+ Y L CLC
Sbjct: 243 LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
N GRW DA ++ + R P TF+ LI + + G + + ++ M K +P+I
Sbjct: 303 NYGRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++++ + +D +AK++FE S + F PD +YS++++
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMV----SKHCF---------PDVVSYSTLIKGFCK 408
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A + + +++ M+ G + + L+ +AG C + + F ++ G P+ +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 669
+ +L EKA+ + + + T + + E K+E + C
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG---MCKAGKVEDGWDLFC 525
Query: 670 NCNAASSEITVSNLSRALHALCR--SEKERD 698
N + + V + + CR S++E D
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 150/412 (36%), Gaps = 63/412 (15%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y V L + G L+ +M Q LEP +++Y ++
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGK---------------LEPGVLIYTTII 263
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + +FK++ G++P+ TY + + G++ M +
Sbjct: 264 DGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
T+ L+ AF +EGK+ EA M +R + + Y L C + R +A +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 442 VE----------------KIKSLRHSKPLE------------------ITFTGLIISSMD 467
E IK +K ++ +T+T LI
Sbjct: 384 FEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ 443
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G D IF+ M D PNI T N +L +N KA +FE R+
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK------- 496
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
++P YTY+ M+E A + E ++ ++L G + D + ++ R G
Sbjct: 497 ------MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
+ F + E G +P+ + ++ + + E + LI M F
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 122/272 (44%), Gaps = 24/272 (8%)
Query: 222 KRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
KR + V Y+ L+ R EA ++F M+ + +PD+ +Y ++ + +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK-HCFPDVVSYSTLIKGFCKAKRV 412
Query: 281 KELVKLIERMRQKP--------SKRIKNMHRK-NWDPVLE-----------PDLVVYNAV 320
E ++L M Q+ + I+ + + + D E P+++ YN +
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
L+ + + + VF+ L++S ++P+ TY + +E M ++GK + + F ++ G
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ Y ++ F +G EA A + M++ G + + Y L +G + +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
++++++S + + + GL+ + + G +D
Sbjct: 593 LIKEMRSCGFAG--DASTIGLVTNMLHDGRLD 622
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 17/210 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L +AG A IF M+ D + P+I Y+++ L + G L++ + + E +
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EP + YN ++ + + + + +F L G+KP
Sbjct: 493 QRSK---------------MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + + G + F++M + G + Y L+RA +G + ++ M
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAML 440
G G AS L + ++GR + L
Sbjct: 598 RSCGFAGDAST-IGLVTNMLHDGRLDKSFL 626
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 169/405 (41%), Gaps = 31/405 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL+ + G EA +F M E + PDI Y + T G++ L+++ +L++
Sbjct: 254 TYNTLLSACARRGLGDEAEMVFRTMNEG-GILPDITTYSYLVETFGKLNRLEKVSELLKE 312
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M S PD+ YN +L A S K VF+Q++ +G P+A
Sbjct: 313 MESGGSF---------------PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNA 357
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
ATY + + + + G+YD V + F +M S A TY +L+ F E G E V +
Sbjct: 358 ATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHD 417
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + V Y L G +DA ++ + + P +TG+I +
Sbjct: 418 MVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNE-KGVVPSSKAYTGVIEAYGQAA 476
Query: 470 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
++ + F M + +P + T N++++++++ ++ +++ + + SG
Sbjct: 477 LYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAIL---LKMGQSG------ 527
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ + T++ ++EA Q+E Y M + C D+ +L AG
Sbjct: 528 ----VARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLV 583
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
E F + G +P + + ML ++ A L++ M
Sbjct: 584 EESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEM 628
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 187/453 (41%), Gaps = 85/453 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++ +LG+ G + IF+
Sbjct: 116 VFKEFAQRGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFD 170
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + P + ++ ++ G+ G K ++L++RM+++ + P
Sbjct: 171 EMPSH-GVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKER---------------VSP 214
Query: 313 DLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
++ YN V+N+C W+ + +F Q+R G++ TY + + G D
Sbjct: 215 SILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMV 274
Query: 372 FRKMAKSG------------EAIGAL-----------------------TYKVLVRAFWE 396
FR M + G E G L +Y VL+ A +
Sbjct: 275 FRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQ 334
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G I EA+ R M+ G V A+ Y L +GR+ D + ++K + +++P
Sbjct: 335 SGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMK-VSNTEPNAA 393
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF--- 512
T+ LI +GG+ + +++F M +++ EPN+ T ++ + + AK++
Sbjct: 394 TYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHM 453
Query: 513 -EETTRANSSGYT------------------FLSGDGAPLKPDEYTYSSMLEASATAHQW 553
E+ +S YT F + + KP TY+S+++ A +
Sbjct: 454 NEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLY 513
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+ E + M SG ++ ++EA R G
Sbjct: 514 KESEAILLKMGQSGVARNRDTFNG-VIEAFRQG 545
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 156/385 (40%), Gaps = 33/385 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ GS ++AM V + G + + Y+ LL + G+ GR ++ +R L +
Sbjct: 328 LLEAHAQSGSIKEAMGVFRQMQG---AGCVPNAATYSILLNLYGRHGR-YDDVRDLFLEM 383
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N P+ A Y+ + G+ G KE+V L M ++ +EP++
Sbjct: 384 KVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN---------------VEPNME 428
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++ AC + + + + G+ PS+ Y +E Q+ Y+ F M
Sbjct: 429 TYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTM 488
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G TY L++ F + G E+ A + M Q GV + + G++
Sbjct: 489 NEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQF 548
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
++A+ +++ R P E T ++ G +++ F +K P++
Sbjct: 549 EEAIKAYVEMEKAR-CDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCM 607
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
ML VY++ D + A +L +E S + G + +Y S W+
Sbjct: 608 MLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQ---MIRGDYDDDS---------NWQ 655
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLL 579
EYV++ + GC L + LL
Sbjct: 656 MVEYVFEKLKSEGCSLGVRFYNTLL 680
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/519 (20%), Positives = 212/519 (40%), Gaps = 47/519 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL D+G A+++LD + + S YT LL + K+ EA+ + + M
Sbjct: 147 IIRGLCDRGRVGDALALLD---DMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMR 203
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P+I Y+ + + + G + + +++ R+ +PD+
Sbjct: 204 AKGCT--PNIVTYNVIINGMCREGRVDDAKEILNRLSSYG---------------FQPDI 246
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V Y VL + +W V +F ++ P+ T+ + + + G + + ++
Sbjct: 247 VSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQ 306
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M++ G +++ A ++G++++A + NM G Y + LC GR
Sbjct: 307 MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 366
Query: 435 WQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
W+ A L+ E ++ ++ P E+TF I G I+ I + + M ++ C I T
Sbjct: 367 WEHAKELLPEMVR--KNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTY 424
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
NA++ + A ELF + P +P+ TY+++L A +
Sbjct: 425 NALVHGFCVQGRVDSALELF----------------NNLPCEPNTITYTTLLTGLCHAER 468
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+ + GM C L+ L+ + G + ++E G P+ + F
Sbjct: 469 LDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNT 528
Query: 613 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR-DKLEKLLNALCNC 671
+L N E+A+ L++ + + T + S D +SR D+ E+ + L
Sbjct: 529 LLDGITKDCNSEEALELLHGLVSKGVSLD----TITYSSVVDVLSREDRTEEAIQMLHAV 584
Query: 672 NAASSEITVSNLSRALHALC-RSEKERDLSSSAHFGSQA 709
V ++ L ALC R E ++ + A+ S
Sbjct: 585 QDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG 623
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 173/459 (37%), Gaps = 43/459 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++ TKL+ L + GR +A R+ E D+ AY+++ + G L +LI
Sbjct: 75 YLCTKLIRNLCRRGRTSDAARVLRTA-EASGAPVDVFAYNTLVAGYCRYGRLDAARRLIA 133
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M PV PD Y ++ + + + + G +PS
Sbjct: 134 SM-----------------PV-PPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPS 175
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + +E + +S + +M G +TY V++ EG++++A +
Sbjct: 176 VVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 235
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+ G Y + LC RW D ++ ++ + P E+TF L+ G
Sbjct: 236 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD-KKCVPNEVTFDMLVRFFCRG 294
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G ++ I + Q M H C PN N ++ + A Y FL+
Sbjct: 295 GMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDA--------------YDFLN 340
Query: 528 GDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
G PD +Y+++L A +WE+ + + M C ++ + + G
Sbjct: 341 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 400
Query: 587 KCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
L+E A + + E G + + ++ VQ + A+ L N + P IT
Sbjct: 401 ---LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYT 457
Query: 644 Q-WTELFESNEDRISRDKLEKLLNALCNCNAASSEITVS 681
T L + + + L ++ C NA + + VS
Sbjct: 458 TLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVS 496
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 116/325 (35%), Gaps = 65/325 (20%)
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG------------------------ 414
GEA L+R G+ ++A +R E G
Sbjct: 69 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128
Query: 415 --------VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
V A Y + LC+ GR DA+ +++ + R +P +T+T L+ +
Sbjct: 129 RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ-RGCQPSVVTYTVLLEAVC 187
Query: 467 DGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
+ +++ M+ C PNI T N ++ R AKE+ R +S G+
Sbjct: 188 KSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN---RLSSYGF-- 242
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+PD +Y+++L+ A +W+ + ++ M C ++ L+ R
Sbjct: 243 --------QPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRG 294
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV-QSNYEKAVALINAMAYAPFHITERQ 644
G + + G P+ ++I AI Q + A +N M
Sbjct: 295 GMVERAIQVLQQMSQHGCTPNTT-LCNIVINAICKQGRVDDAYDFLNNMG---------- 343
Query: 645 WTELFESNEDRISRDKLEKLLNALC 669
++ N D IS +L LC
Sbjct: 344 ---MYGCNPDTIS---YTTVLRGLC 362
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 152/330 (46%), Gaps = 26/330 (7%)
Query: 274 LGQVGLLKELVKLIERMRQ-KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
LG+ GL +L + +R+ P + P+L D + ++++ CV
Sbjct: 260 LGKGGLPHRGAQLFDLLRRLGPGSPLA--------PLL--DEFTFTSMISNCVAQQDLGR 309
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+ +++R G++ + T+ M V ++ G+Y L + +R M +G +TY L+
Sbjct: 310 AMALAEEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTYNTLID 369
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
+ + G+ EA+A + M++ + + L + +WQ+A+ V E++ + H
Sbjct: 370 VYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASSH-P 428
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P T+ LI + GG + +++F+ M + CE ++ T ++++ + + A +L
Sbjct: 429 PNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWKLALQL 488
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
FEE + G+G P+ +Y+S++ A A QWE V++ M GC+ D
Sbjct: 489 FEE-----------MRGEGC--VPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPD 535
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
+ L+ R G+ AF+ ++ A
Sbjct: 536 VVSYTALIQAYERGGQWRRALAAFEEMIRA 565
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 132/303 (43%), Gaps = 22/303 (7%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++D+ ++ ++ L+ + K G+ AL ++ M + ++ Y+++ G+ G
Sbjct: 317 MRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDM-QAAGCPANVVTYNTLIDVYGKSG 375
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+E + ++E+M+++ RI+ + R +N ++ AC S+QW+ V++
Sbjct: 376 QWEEALAVLEQMKRE---RIQPVTR------------TFNTLMIACNTSNQWQEALRVYE 420
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
Q+ S P+ TY + + G V F++M + G +TY L+ A + G
Sbjct: 421 QMAASSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAG 480
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+ A+ M G V Y L +W+ A V E+++ + +P +++
Sbjct: 481 EWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQR-QGCRPDVVSY 539
Query: 459 TGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMF---SKAKELFE 513
T LI + GG ++ F+ M C P+ N ++ V + KA LF
Sbjct: 540 TALIQAYERGGQWRRALAAFEEMIRARPCAPDSIVYNTIIDVLWETGVGWAQRKAASLFR 599
Query: 514 ETT 516
+ +
Sbjct: 600 QAS 602
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/292 (18%), Positives = 120/292 (41%), Gaps = 27/292 (9%)
Query: 353 GLAMEVMLQSGKYDLVH------EFFRKMAKSGEAIGAL----TYKVLVRAFWEEGKINE 402
GLAM V+ GK L H + R++ G + L T+ ++ + +
Sbjct: 252 GLAM-VIKDLGKGGLPHRGAQLFDLLRRLGP-GSPLAPLLDEFTFTSMISNCVAQQDLGR 309
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A+A M RG+ + L G+++ A+ V +++ + +T+ LI
Sbjct: 310 AMALAEEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANV-VTYNTLI 368
Query: 463 ISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G ++ +++ + MK + +P T N ++ + ++ + +A ++E+ ++
Sbjct: 369 DVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASSH- 427
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
P+ TY++++ A + V+K M GC+ ++ L+
Sbjct: 428 ------------PPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISA 475
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+AG+ L F+ + G +P+ + + ++ + +EKA + M
Sbjct: 476 CEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQM 527
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 182/419 (43%), Gaps = 38/419 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ LG++G W +A+ +W+ R S+ + +++ LG+ G+ AL +FN
Sbjct: 169 LLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLA-SIMISTLGRLGKVEIALDVFN-RA 226
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS----------------- 295
+ ++ AY ++ G+ G +E +K+ + M++ KP+
Sbjct: 227 QKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVD 286
Query: 296 -KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
K+ ++ + +EPD + +N+++ C W+ VF ++++ G++ T+
Sbjct: 287 LKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNT 346
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + + G+ +L M + +TY ++ + + G EA++ +M++ G
Sbjct: 347 LIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESG 406
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
V Y L GR+ DA++ + ++ + K +T+ LI + G D
Sbjct: 407 VRPDRVSYNTLIDIYAKLGRFDDALIACKDMERV-GLKADVVTYNALIDAYGKQGKYKDA 465
Query: 475 ISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+F MK + PN+ T +A++ YS+ M +F E RA L
Sbjct: 466 ACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAG-------------L 512
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
KPD YSS++++ E + + M +G Q + + L+ R G+ LE
Sbjct: 513 KPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLE 571
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/438 (19%), Positives = 184/438 (42%), Gaps = 34/438 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV-TLGQVGLLKELVKLIER 289
+ LL LG G AL+ + M++ +L + + S+ + TLG++G ++ + + R
Sbjct: 166 FPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFNR 225
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ ++ Y+A+++A S + + VF+ ++K+G KP+
Sbjct: 226 AQKAG---------------FGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNL 270
Query: 350 ATYGLAMEVMLQSGKYDLVH--EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY ++ + G DL + F +M K G +T+ L+ G ++
Sbjct: 271 ITYNTIIDACGKGG-VDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVF 329
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M++RG+ + L +C G+ + A ++ ++ ++ P +T++ +I
Sbjct: 330 AEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRG-KNISPNVVTYSTMIDGYGK 388
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G ++ IS++ MK+ P+ + N ++ +Y++ F A ++ R
Sbjct: 389 LGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG------- 441
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
LK D TY+++++A +++ ++ M G + ++ L+ S+AG
Sbjct: 442 ------LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAG 495
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
+ + F AG P + ++ ++ E AV L+ M A +
Sbjct: 496 MHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYN 555
Query: 647 ELFESNEDRISRDKLEKL 664
L ++ DKLE +
Sbjct: 556 SLIDAYGRYGQADKLEAV 573
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 133/320 (41%), Gaps = 50/320 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A+S+ + +K+ R Y L+ I K GR +AL I +
Sbjct: 382 MIDGYGKLGCFEEAISLY---HDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL-IACKDM 437
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E L D+ Y+++ G+ G K+ L ++M+ + L P+++
Sbjct: 438 ERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEG---------------LVPNVL 482
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+A++++ + + V VF + +++GLKP Y ++ + G + ++M
Sbjct: 483 TYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEM 542
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
++G +TY L+ A+ G+ ++ A NM N
Sbjct: 543 TQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMP--------------------NSVQ 582
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+ +E ++ S+ TG++ + +S+F M+ +PN+ T +A
Sbjct: 583 KIGERSMEVVRKPPPSQQNASDHTGVLAA----------VSVFHEMQQFGLKPNVVTFSA 632
Query: 495 MLKVYSRNDMFSKAKELFEE 514
+L SR +A L E+
Sbjct: 633 ILNACSRCASLQEASVLLEQ 652
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 198/497 (39%), Gaps = 53/497 (10%)
Query: 96 LASESKEFAGDNLKRENLRELKEMFEKDLNW-------VLDDDVQLGSDYFAKNVEWHPE 148
LA S F G R R +E E + W +L QLG A ++ E
Sbjct: 223 LARLSNSFDG---IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQME 279
Query: 149 KRWR-SEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKG 204
R + + V+VD + E K K + + + GL +T ++ L G
Sbjct: 280 FRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVV 339
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
Q + V+ K++R VYT L++ GK+G ++F+ M + PD
Sbjct: 340 EAEQVLRVM------KNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK-KIVPDF 392
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y S+ L Q G + E KL M K L+PD V Y A+++
Sbjct: 393 VTYTSMIHGLCQAGKVVEARKLFSEMLSKG---------------LKPDEVTYTALIDGY 437
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + K F + Q+ + GL P+ TY ++ + + G+ D+ +E +M++ G
Sbjct: 438 CKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNV 497
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
TY L+ + G I +AV + M+ G Y + C G A ++ +
Sbjct: 498 CTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL-R 556
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS-RN 502
I + +P +TF L+ G ++D + + M D PN T N+++K Y RN
Sbjct: 557 IMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRN 616
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+M RA Y + G + PD TY+ +++ A + +++K
Sbjct: 617 NM------------RATIEIYKGMHAQG--VVPDTNTYNILIKGHCKARNMKEAWFLHKE 662
Query: 563 MALSGCQLDQTKHAWLL 579
M G L + L+
Sbjct: 663 MVEKGFSLTAASYNSLI 679
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 139/329 (42%), Gaps = 18/329 (5%)
Query: 327 SHQWKGV---FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
S+ + G+ F VF++ + G+ + +Y + + ++ Q GK H +M G
Sbjct: 227 SNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPD 286
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
++Y V+V + + ++ + + + ++++G+ Y + LC GR +A V+
Sbjct: 287 VVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLR 346
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRN 502
+K+ R P + +T LI G++ +F MK P+ T +M+ +
Sbjct: 347 VMKNQRIF-PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQA 405
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+A++LF E S G LKPDE TY+++++ A + + ++
Sbjct: 406 GKVVEARKLFSEML---SKG----------LKPDEVTYTALIDGYCKAGEMKEAFSLHNQ 452
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M G + + L+ + G+ + + E G P+ + ++ N
Sbjct: 453 MVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGN 512
Query: 623 YEKAVALINAMAYAPFHITERQWTELFES 651
E+AV L+ M A F +T + ++
Sbjct: 513 IEQAVKLMEEMDLAGFFPDTITYTTIMDA 541
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/453 (19%), Positives = 173/453 (38%), Gaps = 54/453 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML--------EDCNLYPD---------------IA 265
V+ +L +AG EA ++F+ +L + CNL+
Sbjct: 182 LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR 241
Query: 266 AYHSVAVTLGQV--GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
Y V V V ++ L+ + ++++ S I+ R N PD+V Y+ +++
Sbjct: 242 EYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV-----PDVVSYSVIVDG 296
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
Q V + ++L++ GLKP+ TY + + ++G+ + R M
Sbjct: 297 YCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPD 356
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+ Y L+ F + G ++ M+++ +V Y + LC G+ +A +
Sbjct: 357 NVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFS 416
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 502
++ S + KP E+T+T LI G + + S+ M + PN+ T A++ +
Sbjct: 417 EMLS-KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475
Query: 503 DMFSKAKELFEETT----RANSSGYTFLSG------------------DGAPLKPDEYTY 540
A EL E + + N Y L D A PD TY
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+++++A + + + M G Q L+ +G E +L+
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G +P+ F ++ Q +++N + + M
Sbjct: 596 KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGM 628
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 162/386 (41%), Gaps = 31/386 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL+ + G EA +F M E + PDI Y + T G++ L+++ +L++
Sbjct: 12 TYNTLLSACARRGLGDEAEMVFRTMNEG-GILPDITTYSYLVETFGKLNRLEKVSELLKE 70
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M S PD+ YN +L A S K VF+Q++ +G P+A
Sbjct: 71 MESGGSF---------------PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNA 115
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
ATY + + + + G+YD V + F +M S A TY +L+ F E G E V +
Sbjct: 116 ATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHD 175
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + V Y L G +DA ++ + + P +TG+I +
Sbjct: 176 MVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNE-KGVVPSSKAYTGVIEAYGQAA 234
Query: 470 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
++ + F M + +P + T N++++++++ ++ +++ + + SG
Sbjct: 235 LYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAIL---LKMGQSG------ 285
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ + T++ ++EA Q+E Y M + C D+ +L AG
Sbjct: 286 ----VARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLV 341
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEML 614
E F + G +P + + ML
Sbjct: 342 EESEEQFGEIKALGILPSVMCYCMML 367
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 25/300 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++ D+V YN +L+AC VF+ + + G+ P TY +E + + + V
Sbjct: 6 IQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVS 65
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E ++M G +Y VL+ A + G I EA+ R M+ G V A+ Y L
Sbjct: 66 ELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLY 125
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
+GR+ D + ++K + +++P T+ LI +GG+ + +++F M +++ EPN
Sbjct: 126 GRHGRYDDVRDLFLEMK-VSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPN 184
Query: 489 IGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYT------------------FL 526
+ T ++ + + AK++ E+ +S YT F
Sbjct: 185 METYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFN 244
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+ + KP TY+S+++ A ++ E + M SG ++ ++EA R G
Sbjct: 245 TMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNG-VIEAFRQG 303
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 153/376 (40%), Gaps = 33/376 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ GS ++AM V + G + + Y+ LL + G+ GR ++ +R L +
Sbjct: 86 LLEAHAQSGSIKEAMGVFRQMQG---AGCVPNAATYSILLNLYGRHGR-YDDVRDLFLEM 141
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N P+ A Y+ + G+ G KE+V L M ++ +EP++
Sbjct: 142 KVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN---------------VEPNME 186
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++ AC + + + + G+ PS+ Y +E Q+ Y+ F M
Sbjct: 187 TYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTM 246
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G TY L++ F + G E+ A + M Q GV + + G++
Sbjct: 247 NEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQF 306
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
++A+ +++ R P E T ++ G +++ F +K P++
Sbjct: 307 EEAIKAYVEMEKAR-CDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCM 365
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
ML VY++ D + A +L +E S + G + +Y S W+
Sbjct: 366 MLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQ---MIRGDYDDDS---------NWQ 413
Query: 555 YFEYVYKGMALSGCQL 570
EYV++ + GC L
Sbjct: 414 MVEYVFEKLKSEGCSL 429
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 87/238 (36%), Gaps = 24/238 (10%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+R G++ TY + + G D FR M + G TY LV F + +
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ + ++ ME G + Y L +G ++AM V +++ P T++
Sbjct: 61 LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQG-AGCVPNAATYS 119
Query: 460 GLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
L+ G DD +F MK + EPN T N ++ V+ F + LF +
Sbjct: 120 ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE 179
Query: 519 NS-------SGYTFLSGDGA---------------PLKPDEYTYSSMLEASATAHQWE 554
N G F G G + P Y+ ++EA A +E
Sbjct: 180 NVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYE 237
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/460 (19%), Positives = 191/460 (41%), Gaps = 43/460 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G + G A+ +L+ +K F +T ++ + AG A+ M
Sbjct: 118 VISGFCNAGDLHAALELLEE---MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG 174
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK--PSKRI--------------- 298
D P++ Y ++ + L+E +KL+E MR++ P +
Sbjct: 175 CD----PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMV 230
Query: 299 ---KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+++ +K + P+++ +N++++ + + G++P+ TY
Sbjct: 231 GAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSAL 290
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + +S K+ E +M G A TY L+ + KI EA +R M G
Sbjct: 291 IDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 350
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
VY + C +G+ +A +++++ R S P +T+ +I G I +
Sbjct: 351 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS-PDVVTYNTVIDGLCKLGKIAEAQ 409
Query: 476 SIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
I + M++ + P++ T + ++ ++DM +A++L + +A +
Sbjct: 410 VILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCN------------ 457
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
PD TY+++++ + E EY+ +GM +GC + + L+ +A K E
Sbjct: 458 -PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 516
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ + AG P+ + + M+ V ++A L+ M
Sbjct: 517 VMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 131/304 (43%), Gaps = 20/304 (6%)
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+R K + ++ R EPD+ YN V++ + + ++++ +G P A
Sbjct: 88 VRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDA 147
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ + M +G D + R M G +TY L+ AF K+ EA+ +
Sbjct: 148 FTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEE 204
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M +RG Y L LC A VV+K+ + P +TF L+ G
Sbjct: 205 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFA-PNVMTFNSLVDGFCKRG 263
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
++DD + M PN+ T +A++ ++ F +AKE+ EE + G T
Sbjct: 264 NVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM---KTRGVT---- 316
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
PD +TYS+++ A + E E + + MA SGC D ++ ++ ++GK
Sbjct: 317 ------PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK- 369
Query: 589 HLLE 592
LLE
Sbjct: 370 -LLE 372
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/430 (18%), Positives = 180/430 (41%), Gaps = 45/430 (10%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+ F + LL +L + + EA +F + +L C PD+ +Y+ V G L ++
Sbjct: 76 TAFSWNSLLQVLVRCKKHREAGDLFRSELLASCE--PDVCSYNIVISGFCNAGDLHAALE 133
Query: 286 LIERMRQKP--------SKRIKNM-HRKNWDPVL--------EPDLVVYNAVLNACVPSH 328
L+E M+ + I M + + D + +P++V Y A++ A +
Sbjct: 134 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAK 193
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ + + +++R+ G P+ TY + ++ + + + +KM + G A +T+
Sbjct: 194 KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 253
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
LV F + G +++A + M +G+ Y L LC + ++ +A V+E++K+
Sbjct: 254 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKT- 312
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
R P T++ LI I++ + + M C P++ ++++ + ++ +
Sbjct: 313 RGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE 372
Query: 508 AKELFEETTRANSSG-----YTFLSG------------------DGAPLKPDEYTYSSML 544
A++ +E + S T + G + + PD TYS+++
Sbjct: 373 AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVI 432
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ + + M +GC D + ++ + G+ E+ + AG
Sbjct: 433 NGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCA 492
Query: 605 PHPLFFTEML 614
P+ + +T ++
Sbjct: 493 PNVVTYTTLI 502
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 138/348 (39%), Gaps = 34/348 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
LVD +R K + IM G+ L+ GL + +A VL+ +K
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE---MK 311
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ F Y+ L+ L KA + EA ++ M PD+ Y S+ + G L
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS-GCTPDVVVYSSIIHAFCKSGKL 370
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLE-------------------------PDLV 315
E K ++ MR K+ K+ ++ V++ PD+V
Sbjct: 371 LEAQKTLQEMR----KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ V+N S + ++ K+G P TY ++ + + G+ + + M
Sbjct: 427 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 486
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
++G A +TY L+ + K++EA + M G Y + LC +GR
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546
Query: 436 QDAMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
++A +V+++K R P T+ ++ + M + + + + MK
Sbjct: 547 KEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 156/383 (40%), Gaps = 18/383 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD +N ++ + + ++ ++G +P TY + + +SG L +
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
RKM + TY ++ + +G I+ A++ + ME +G+ + Y L LC
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
G+W D L+++ + S R P ITF L+ + G + + +++ M PNI
Sbjct: 265 KAGKWNDGALLLKDMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 323
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N ++ Y + S+A + + R S PD T++S+++
Sbjct: 324 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-------------PDIVTFTSLIKGYCM 370
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + V++ ++ G + ++ L+ ++GK L E F ++ G +P +
Sbjct: 371 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 430
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 669
+ +L EKA+ + + + + +T + E K+E N C
Sbjct: 431 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG---MCKGGKVEDAWNLFC 487
Query: 670 NCNAASSEITVSNLSRALHALCR 692
+ + V + + LC+
Sbjct: 488 SLPCKGVKPNVMTYTVMISGLCK 510
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 178/426 (41%), Gaps = 34/426 (7%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL V L + D + + L+ L G+ EA+ + + M+E+ PD+ Y+
Sbjct: 132 AYSVLGKVMKLGYEPDTTT---FNTLIKGLFLEGKVSEAVVLVDRMVEN-GCQPDVVTYN 187
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S+ + + G + L+ +M ++ K D+ Y+ ++++
Sbjct: 188 SIVNGICRSGDTSLALDLLRKMEERNVK---------------ADVFTYSTIIDSLCRDG 232
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+FK++ G+K S TY + + ++GK++ + M +T+
Sbjct: 233 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 292
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
VL+ F +EGK+ EA + M RG+ Y L C R +A +++ +
Sbjct: 293 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 352
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ S P +TFT LI +DD + +F+++ K N T + +++ + ++
Sbjct: 353 KCS-PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 411
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A+ELF+E S G + PD TY +L+ + E +++ + S
Sbjct: 412 AEELFQEMV---SHG----------VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 458
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
L + ++ + GK + F SL G P+ + +T M+ + + +A
Sbjct: 459 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 518
Query: 628 ALINAM 633
L+ M
Sbjct: 519 ILLRKM 524
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 129/313 (41%), Gaps = 37/313 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR------FVYTKLLAILGKAGRPHEALR 249
L++GL G W +L +D+ SR + LL + K G+ EA
Sbjct: 259 LVRGLCKAGKWNDGALLL---------KDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 309
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-RQKPS------------- 295
++ M+ + P+I Y+++ L E +++ M R K S
Sbjct: 310 LYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 368
Query: 296 ---KRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
KR+ + + R L + V Y+ ++ S + K +F+++ G+ P
Sbjct: 369 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 428
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TYG+ ++ + +GK + E F + KS +G + Y ++ + GK+ +A +
Sbjct: 429 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 488
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ +GV Y + LC G +A +++ K++ + P + T+ LI + + G
Sbjct: 489 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE-DGNAPNDCTYNTLIRAHLRDG 547
Query: 470 HIDDCISIFQHMK 482
+ + + MK
Sbjct: 548 DLTASAKLIEEMK 560
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 22/209 (10%)
Query: 218 GLKDKRDLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
G+K R++ R Y+ L+ ++G+ A +F M+ + PD+ Y +
Sbjct: 377 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH-GVLPDVMTYGILL 435
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
L G L++ +++ E +++ ++ +V+Y ++ + +
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSK---------------MDLGIVMYTTIIEGMCKGGKVE 480
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+ +F L G+KP+ TY + + + + G + RKM + G A TY L+
Sbjct: 481 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
RA +G + + + M+ G AS
Sbjct: 541 RAHLRDGDLTASAKLIEEMKSCGFSADAS 569
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD++ Y +L+ + + + +F+ L+KS + Y +E M + GK +
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F + G +TY V++ ++G ++EA +R ME+ G Y L
Sbjct: 486 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 545
Query: 432 NGRWQDAMLVVEKIKSLRHS 451
+G + ++E++KS S
Sbjct: 546 DGDLTASAKLIEEMKSCGFS 565
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 196/466 (42%), Gaps = 38/466 (8%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWV---YGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
E LLK L G+W +A+ + +W +G L ++ V ++ ILG+ +
Sbjct: 141 EADFPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVV-ELMVRILGRESQHSI 199
Query: 247 ALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
A ++F+L+ +E +L D+ AY ++ + G K + L ++M
Sbjct: 200 ASKLFDLIPVEKYSL--DVRAYTTILHAYARSGKYKRAIDLFDKMEGIG----------- 246
Query: 306 WDPVLEPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
L+P LV YN +L+ W + + ++R GL+ T + + G
Sbjct: 247 ----LDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGM 302
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
D +F ++ +G G + Y +++ F + G EA++ ++ ME + Y E
Sbjct: 303 LDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNE 362
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 483
LA G + M V++ + S + P IT+T +I + G DD + +F MKD
Sbjct: 363 LAATYVRAGFLDEGMAVIDTMTS-KGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDL 421
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
C PN+ T N++L + + S+ +++ + +G P+ T+++M
Sbjct: 422 GCAPNVYTYNSVLAMLGKK---SRTEDVIKVLCEMKLNG----------CAPNRATWNTM 468
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
L + + Y V + M G + D+ L+ +R G + ++++G
Sbjct: 469 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGF 528
Query: 604 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
P + +L + +++ A ++I M F E ++ L
Sbjct: 529 TPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLL 574
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/523 (21%), Positives = 203/523 (38%), Gaps = 65/523 (12%)
Query: 167 EREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK 226
ER + W ++ + L + +++ LG + A + D + K D++
Sbjct: 158 ERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVR 217
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVK 285
+ YT +L ++G+ A+ +F+ M E L P + Y+ + G++G +++
Sbjct: 218 A---YTTILHAYARSGKYKRAIDLFDKM-EGIGLDPTLVTYNVMLDVYGKMGRSWGRILE 273
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L++ MR K LE D + V++AC +L+ +G
Sbjct: 274 LLDEMRSKG---------------LEFDEFTCSTVISACGREGMLDEARKFLAELKLNGY 318
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
KP Y ++V ++G Y ++M + ++TY L + G ++E +A
Sbjct: 319 KPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMA 378
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M +GV+ A Y + GR DA+ + K+K L P T+ ++
Sbjct: 379 VIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDL-GCAPNVYTYNSVLAML 437
Query: 466 MDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS---------------RNDMFSKAK 509
+D I + MK + C PN T N ML V S +N F K
Sbjct: 438 GKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDK 497
Query: 510 ELFE-----------ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ F E A G SG P TY+++L A A W+ E
Sbjct: 498 DTFNTLISSYARCGSEVDSAKMYGEMVKSG----FTPCVTTYNALLNALAHRGDWKAAES 553
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
V + M G + ++T ++ LL S+AG +E + + P + +L++ +
Sbjct: 554 VIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFP-----SWILLRTL 608
Query: 619 VQSNY--------EKAVALINAMAYAPFHITERQWTELFESNE 653
V SN+ E+A + Y P + +F N+
Sbjct: 609 VLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNK 651
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
V EPD+V YN V+ + V ++ G++P+ TY + +D
Sbjct: 702 VPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEA 761
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+E R M + LTYK+LV + + GK EA+ V +++
Sbjct: 762 NEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKE 805
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 121/330 (36%), Gaps = 34/330 (10%)
Query: 141 KNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGL 200
KN + P+K + L+ + + K M +SG LL L
Sbjct: 489 KNCGFEPDK------DTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNAL 542
Query: 201 GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
+G W+ A SV+ ++ K + Y+ LL KAG ++ + D +
Sbjct: 543 AHRGDWKAAESVIQ---DMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKV-EKEIYDGQV 598
Query: 261 YPDIAAYHSVAVT----------------LGQVGLLKELVKLIERM-----RQKPSKRIK 299
+P ++ ++ L + G +LV +I M R K + +
Sbjct: 599 FPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLV-VINSMLSMFSRNKMFSKAR 657
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQ-WKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
M + L+P+L YN +++ V + WK V K ++ S +P +Y ++
Sbjct: 658 EMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAE-EVLKGIQNSVPEPDVVSYNTVIKG 716
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ G +M G +TY + + +EA +R M + +
Sbjct: 717 FCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPS 776
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
Y L C G+ ++AM V KIK +
Sbjct: 777 ELTYKILVDGYCKAGKHEEAMDFVTKIKEI 806
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 186/453 (41%), Gaps = 51/453 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V +D L + E ++ ++ M++ + T L+ GL G +AM+VL+ +
Sbjct: 47 VFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEK 106
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ LK+ YT ++ L KAGR EA RIF ML + PD Y ++ L + G
Sbjct: 107 GNSPTLKT---YTVVIDGLSKAGRVEEARRIFVDMLGN-GCRPDAFVYTALIKGLCKSGK 162
Query: 280 LKELVKLIERMRQKP---------------------SKRIKNMHRKNWDPVLE----PDL 314
+E L + + + RI + D +E PD
Sbjct: 163 PEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDA 222
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V Y ++++ + + F ++R G +P A TY ++ +++ H +R+
Sbjct: 223 VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 282
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M +SG + +TY +++ + G++ EA A ME+RG V T Y L C+ G
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 342
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTV 492
A+ + ++ R +P +++ +I G + F+ + + C P++ T
Sbjct: 343 VSAAVELFRRMLD-RGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC-PDVYTF 400
Query: 493 NAML-KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
NA L + R D S ELFE +S P+ ++YS +++ A
Sbjct: 401 NAFLHGLCQRLDTVSDGVELFESMVSQGTS-------------PNLHSYSILMDGICRAG 447
Query: 552 QWEYFEYVYKGMALSGCQLD----QTKHAWLLV 580
E +++ M G D T WL +
Sbjct: 448 GLEVALEIFREMVSRGVAPDVVVFNTLIRWLCI 480
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 157/411 (38%), Gaps = 68/411 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+KGL G +A ++ K V YT L+ L KAGR EA ++F+
Sbjct: 153 LIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDE 212
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PD Y S+ L ++G ++E +R M + + EPD
Sbjct: 213 AVERGFIPDAVTYTSIIDGLCKLGRVEE-----------GCERFHEMRNRGY----EPDA 257
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V Y A+++ + + V++Q+ +SG S TY + ++ + ++G+ + F
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G +TY L+ F EG ++ AV R M RG Y + LC G+
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLI---------ISS-------------------- 465
A EK+ R P TF + +S
Sbjct: 378 LAKAYFYFEKLLQ-RRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSY 436
Query: 466 ---MDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
MDG G ++ + IF+ M P++ N +++ +A E+F E R
Sbjct: 437 SILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELER 496
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
++ PD ++Y S+L+ + + E + M L GC
Sbjct: 497 RSA--------------PDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGC 533
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 153/377 (40%), Gaps = 33/377 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ A+ V L + L E ++ER + EPD V YN +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGC---------------EPDYVTYNVFI 49
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + + F + K++ + P+ TY ++ +L++G+ D +M + G +
Sbjct: 50 DGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNS 109
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
TY V++ + G++ EA +M G A VY L LC +G+ ++A +
Sbjct: 110 PTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYAL 169
Query: 442 VEKIKSLRH---SKPLEITFTGLIISSMDGGHIDDCISIF--QHMKDHCEPNIGTVNAML 496
++ + +H + P +T+T LI G I + +F + ++ P+ T +++
Sbjct: 170 YKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSII 229
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
+ + E F E + GY +PD TY+++++ A
Sbjct: 230 DGLCKLGRVEEGCERFHEM---RNRGY----------EPDAVTYAALIDGFMKAKMIPKA 276
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
VY+ M SG + + +L +AG+ F ++ E G + + ++ ++
Sbjct: 277 HRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDG 336
Query: 617 AIVQSNYEKAVALINAM 633
+ N AV L M
Sbjct: 337 FCSEGNVSAAVELFRRM 353
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 20/264 (7%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+ +A L+D + +M K + R M QSG + + +L GL G +A
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 312
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+ ++++ + + Y+ L+ G A+ +F ML D P++ +Y+ +
Sbjct: 313 ATF---LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML-DRGCEPNLVSYNII 368
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQ 329
L + G L + E++ Q+ L PD+ +NA L+ C
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRR---------------LCPDVYTFNAFLHGLCQRLDT 413
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+F+ + G P+ +Y + M+ + ++G ++ E FR+M G A + +
Sbjct: 414 VSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNT 473
Query: 390 LVRAFWEEGKINEAVAAVRNMEQR 413
L+R G+++EA+ R +E+R
Sbjct: 474 LIRWLCIAGRVDEALEVFRELERR 497
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 27/330 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P V Y A+++ + + + V +Q+ + G P+ TY + ++ + ++G+ +
Sbjct: 75 PTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 134
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS----VYYELAC 427
F M +G A Y L++ + GK EA A + R TA Y L
Sbjct: 135 FVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLID 194
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-E 486
LC GR +A V + R P +T+T +I G +++ F M++ E
Sbjct: 195 GLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 254
Query: 487 PNIGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGY------------------T 524
P+ T A++ + + M KA +++ + T ++ Y T
Sbjct: 255 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 314
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
FL+ + TYS++++ + +++ M GC+ + + ++ R
Sbjct: 315 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 374
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
AGK F+ LL+ P F L
Sbjct: 375 AGKLAKAYFYFEKLLQRRLCPDVYTFNAFL 404
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 157/384 (40%), Gaps = 22/384 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+V + V+N + F V ++ ++G +P TY + ++ + ++ + D +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+KM + +TY LV + G+++EA+A + M ++G T Y + L
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM---KDHCE-- 486
GR ++A + + +P +T LI G ++ ++++ K H
Sbjct: 125 AGRVEEARRIFVDMLG-NGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ T +++ + +A+++F++ A G+ PD TY+S+++
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDD--EAVERGFI----------PDAVTYTSIIDG 231
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ E + M G + D +A L+ +A + +L++G +
Sbjct: 232 LCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVS 291
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE--SNEDRISR--DKLE 662
+ + +L +A A AM T ++ L + +E +S +
Sbjct: 292 TVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFR 351
Query: 663 KLLNALCNCNAASSEITVSNLSRA 686
++L+ C N S I + L RA
Sbjct: 352 RMLDRGCEPNLVSYNIIIRGLCRA 375
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 189/448 (42%), Gaps = 79/448 (17%)
Query: 190 EGQMLK-LLKGLGDKGSWRQAMSVLDWVYG--LKDKRDLKSRFVYTKLLAILGKAGRPHE 246
+GQ+L ++ G G +AMS L V G L K ++ LG AGR E
Sbjct: 255 DGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTA-----TLVAVITALGNAGRTEE 309
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKPSKRIKNM-- 301
A IF L++ L P AY+++ + G LK+ +V +ER P + ++
Sbjct: 310 AEAIFE-ELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLI 368
Query: 302 ----HRKNWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL- 345
+ W+ + P+ V++ +L + +W+ F V +++R SG+
Sbjct: 369 DAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVS 428
Query: 346 ----------------------------------KPSAATYGLAMEVMLQSGKYDLVHEF 371
+P A T+ ++ +SG ++ E
Sbjct: 429 PDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEEL 488
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F M +SG + TY +++ +F E+ + + + M+ +G++ Y L
Sbjct: 489 FEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQ 548
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 490
+GR++DA+ +E +KS+ KP + LI + G + I+ F+ M+ D +P++
Sbjct: 549 SGRFKDAIECLEVMKSV-GLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVL 607
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
+N+++ + + ++A + + + LKPD TY+++++A
Sbjct: 608 VLNSLINAFGEDRRDAEAFSVLQYMKEND-------------LKPDVVTYTTLMKALIRV 654
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWL 578
+++ VY+ M LSGC D+ A L
Sbjct: 655 EKFDKVPAVYEEMTLSGCTPDRKARAML 682
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/428 (18%), Positives = 172/428 (40%), Gaps = 50/428 (11%)
Query: 184 SGLMFTEGQMLK------------LLKGL-GDKGSWRQAMSVLDWVYGLKDKRDL--KSR 228
+ L FTE Q+++ LLK L D S A S++ W+ ++ +L
Sbjct: 99 TSLDFTEFQLVESYRAVPAPLWHSLLKSLCSDSSSIGTAYSLVTWL----ERHNLCFSYE 154
Query: 229 FVYTKLLAILGKAGRPHEALRI----------FNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+Y+ L+ LG++ + +EA + +N ++ C D+ ++ + + G
Sbjct: 155 LLYSILIHALGRSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDG 214
Query: 279 LLKELVKL------IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
+ V + R + S ++ ++ + +E D + N ++ S
Sbjct: 215 FPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNR 274
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
++ +GL P AT + + +G+ + F ++ + G Y L++
Sbjct: 275 AMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLK 334
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
+ + G + +A + V ME+ G Y L N GRW+ A +V++++++ +
Sbjct: 335 GYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEA-SGVR 393
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P F+ ++ S D G + + M++ P+ N M+ + + + A
Sbjct: 394 PNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALAT 453
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F+ R G ++PD T++++++ + E +++ M SGC
Sbjct: 454 FD---RMRMEG----------VQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPC 500
Query: 572 QTKHAWLL 579
T + ++
Sbjct: 501 TTTYNIMI 508
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 120/279 (43%), Gaps = 15/279 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P AV+ A + + + +F++L++ GL P Y ++ +++G
Sbjct: 287 LSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAE 346
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M +SG + TY +L+ A+ G+ A ++ ME GV + V+ +
Sbjct: 347 SIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASY 406
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
+ G+WQ + V+ ++++ S P + +I + +D ++ F M+ + +P+
Sbjct: 407 RDRGKWQKSFQVLREMRNSGVS-PDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPD 465
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T N ++ + ++ +KA+ELFE + S P TY+ M+ +
Sbjct: 466 AVTWNTLIDCHCKSGHHNKAEELFEAMQESGCS-------------PCTTTYNIMINSFG 512
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+WE + + M G + + L+ ++G+
Sbjct: 513 EQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGR 551
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 151/343 (44%), Gaps = 24/343 (6%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIM-NQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
++ V+V + F++ M NQ G + L+ GL G + A+ ++D
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTL 274
+ L++ D + Y +++ L K G EA+ + M+ DC+ P+ Y+++ TL
Sbjct: 321 M--LQEGYD-PDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCS--PNTVTYNTLISTL 375
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ ++E +L + K + PD+ +N+++ + +
Sbjct: 376 CKENQVEEATELARVLTSKG---------------ILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+F+++R G +P TY + ++ + GK D ++M SG A +TY L+ F
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ KI EA ME GV + Y L LC + R +DA +++++ + KP
Sbjct: 481 CKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM-IMEGQKPD 539
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 496
+ T+ L+ GG I I Q M + CEP+I T ++
Sbjct: 540 KFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 130/299 (43%), Gaps = 24/299 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD +N ++N + K + + + G P TY + + + G+ EF
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M + +TY L+ +E ++ EA R + +G++ + L LC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 490
+ AM + E+++S + +P E T+ LI S G +D+ +++ + M+ C ++
Sbjct: 413 TRNHRVAMELFEEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 491 TVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTFLSG--------DGAPL---- 533
T N ++ + + + +A+E+F+E +R + + T + G D + L
Sbjct: 472 TYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531
Query: 534 -----KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
KPD++TY+S+L + + + M +GC+ D + L+ +AG+
Sbjct: 532 IMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/448 (19%), Positives = 160/448 (35%), Gaps = 83/448 (18%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
KLL L ALR+FNL + N P+ A Y + + LG+ G ++ K++E M+
Sbjct: 51 VKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMK 110
Query: 292 QKPSKR---------------------IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ + +H D L+PD YN +LN V +
Sbjct: 111 NSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNL 170
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
K V ++ G+KP +T+ + ++ + ++ + M G T+ +
Sbjct: 171 KLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTI 230
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
++ + EEG ++ A+ M + G + + C GR +DA+ ++++ +
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIF-------------------------------- 478
P + TF L+ GH+ I I
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 479 ----QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT------------------ 516
Q + C PN T N ++ + + +A EL T
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 517 ------RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
R + + G +PDE+TY+ ++++ + + + + K M LSGC
Sbjct: 411 CLTRNHRVAMELFEEMRSKGC--EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSL 598
+ L+ +A K E FD +
Sbjct: 469 SVITYNTLIDGFCKANKIREAEEIFDEM 496
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/296 (18%), Positives = 117/296 (39%), Gaps = 27/296 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
L+ L + + + R++ G++ L++GL + R AM + + +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE---M 426
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVG 278
+ K F Y L+ L G+ EAL + M L C + Y+++ +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA--RSVITYNTLIDGFCKAN 484
Query: 279 LLKELVKLIERMRQK-----------------PSKRIKNMHRKNWDPVLE---PDLVVYN 318
++E ++ + M S+R+++ + ++E PD YN
Sbjct: 485 KIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYN 544
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
++L K + + + +G +P TYG + + ++G+ ++ + R +
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNG 433
G A+ Y +++ + + K EA+ R M ++ +V Y + LCN G
Sbjct: 605 GIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGG 660
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 109/272 (40%), Gaps = 26/272 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
++ GL G ++A+ LD + RD V Y L++ L K + EA + ++
Sbjct: 336 VISGLCKLGEVKEAVEFLDQMI----TRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKN 305
+ PD+ ++S+ L + ++L E MR K P + NM +
Sbjct: 392 TSK-GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 306 WDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
D L ++ YN +++ +++ + +F ++ G+ ++ TY
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + +S + + + +M G+ TY L+ F G I +A V+ M G
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L LC GR + A ++ I+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 156/367 (42%), Gaps = 37/367 (10%)
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
++GL LI+ + + + + + + L+P+L++YN+V+NA +
Sbjct: 190 KMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAES 249
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ ++ KSG+KP TY + ++ D E F +M + G A TY L+
Sbjct: 250 IINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLC 309
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G++NEA+ + M + GV+ T + LC+ GR +DA + +K + KP
Sbjct: 310 NSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKK-KGCKPNV 368
Query: 456 ITFTGLI----ISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
T+T LI +S M I +F M +D PN T NA++ V N A
Sbjct: 369 YTYTSLISGQRVSRM-------AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALI 421
Query: 511 LFEETTR----ANSSGYTFL------SGD-------------GAPLKPDEYTYSSMLEAS 547
+F + N+S Y L GD G P P TY+ +++
Sbjct: 422 VFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP-TPTLVTYNIIIKGY 480
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ + V + M +GCQ D+ + L+ + K L F+ +++ G P+
Sbjct: 481 CDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNE 540
Query: 608 LFFTEML 614
+ +T ++
Sbjct: 541 VTYTALI 547
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/410 (19%), Positives = 154/410 (37%), Gaps = 65/410 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KG D G A+ VL+ + + D + YT+L++ K + A +FN M+
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPD---EWSYTELISGFCKISKMELASGMFNEMM 532
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D L P+ Y ++ + L +++ERM++ + P++
Sbjct: 533 -DRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR---------------PNVQ 576
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +++ + + G + K + + + P TY + + +G L E F KM
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKM 636
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G TY L++A +EG++ EA ++++G++
Sbjct: 637 VKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLI------------------- 677
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
P E+T+ +I + G +D M + C+P + T +
Sbjct: 678 -----------------PDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDV 720
Query: 495 MLKVYSRNDMFSKAKELFEETTRA-------NSSGYTFLSGDGAPL--KPDEYTYSSMLE 545
++K ++ K L + + N + LS A L + Y ++L
Sbjct: 721 LIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLS 780
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
+ + +W +Y+ M +Q + L+ RA K L F
Sbjct: 781 RLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVF 830
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 189/446 (42%), Gaps = 38/446 (8%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
ALRI + ++ +L PD Y +V L G + + V L+ M
Sbjct: 102 ALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVA-------------- 147
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D V+ + +N VL A + + KG +F+ ++ G P+AATY + + +L G+
Sbjct: 148 DGVVAAE--AFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAG 205
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
R+M + G G +TY +V G++ +A ME+ G+ VY +
Sbjct: 206 AAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVI 265
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 485
C +G A+ V E + + +P + ++ +I + G + + +F+ M D C
Sbjct: 266 TGFCKSGEIDCALKVWEAMVA-SPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKC 324
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PNI T +M++ Y + S+A ++EE GA P+ +YS ++
Sbjct: 325 APNIITYGSMIQGYFKIGDTSRALSVWEEMI-------------GAGCMPNAVSYSILIN 371
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI- 604
+ + V+K M GC D + ++ +G F +L +G
Sbjct: 372 GLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHAD 431
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKL 661
P + + +L ++ + +A+ L+N M P +T + F + E R R+ L
Sbjct: 432 PDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGE-RKGREFL 490
Query: 662 EKLLNALCN--CNAASSEITVSNLSR 685
E L+ LC+ N A+ E+ + L++
Sbjct: 491 EGLVVRLCDRRRNMAAGEVLMVMLAK 516
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 197/485 (40%), Gaps = 42/485 (8%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L + K L +G RQ +VL+ ++ + + + Y L+ +L ++G EAL ++
Sbjct: 161 LTIFKALSIRGGLRQMTTVLN---KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRR 217
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVKLIER-------------MRQK 293
M+ + L P + Y ++ V LG+ + LLKE+ L R R
Sbjct: 218 MVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ R+ D PDLV Y +++A + Q + +F +++ +G KP Y
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYI 336
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
++ G D EF+ +M G +T+ +LV + +EA A M ++
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G++ Y L C L GR +DA+ ++ ++S+ +P T+ I G
Sbjct: 397 GILPNLHTYNTLICGLLRAGRIEDALKLLGTMESV-GVQPTAYTYNIFIDYFGKSGETGK 455
Query: 474 CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ F+ MK PNI NA L + +AK +F R N
Sbjct: 456 AVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF-NGLRENG------------ 502
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
L PD TY+ M++ + Q + + M +GC+ D L+ +AG+
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA---YAPFHITERQWTELF 649
FD + + P + + +L + +KA+ L +M +P I+ + F
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Query: 650 ESNED 654
N++
Sbjct: 623 CKNDE 627
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 135/318 (42%), Gaps = 30/318 (9%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD ++ + G+ G + EL +L + M S+R K PD + YN V+
Sbjct: 821 PDAFTFNMLLAVHGKSGKITELFELYKEM---ISRRCK------------PDAITYNIVI 865
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
++ S+ F L S +P+ TYG ++ + + G+ + F +M+ G
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+ +L+ + + G A + M G+ Y L CLC GR +A+
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
++KS P I + +I +++ ++++ M++ P++ T N+++
Sbjct: 986 FNELKS-TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
M +AK ++EE A L+PD +TY++++ + + E+ VY
Sbjct: 1045 LAGMVEQAKRMYEELQLAG-------------LEPDVFTYNALIRGYSLSENPEHAYTVY 1091
Query: 561 KGMALSGCQLDQTKHAWL 578
K M + GC + +A L
Sbjct: 1092 KNMMVDGCNPNIGTYAQL 1109
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 133/332 (40%), Gaps = 21/332 (6%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ L E T K W + M G LL G G + + + +
Sbjct: 794 LIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR 853
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K D Y +++ L K+ +AL F ++ + P Y + L +VG L
Sbjct: 854 CKPD---AITYNIVISSLAKSNNLDKALDFFYDLVSS-DFRPTPRTYGPLIDGLAKVGRL 909
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+E ++L E M K P+ ++N ++N + +FK++
Sbjct: 910 EEAMRLFEEMSDYGCK---------------PNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
G++P +Y + ++ + +G+ D +F ++ +G + Y ++ + ++
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
EA+A M RG+V Y L L G + A + E+++ L +P T+
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ-LAGLEPDVFTYNA 1073
Query: 461 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGT 491
LI + + +++++M D C PNIGT
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 157/383 (40%), Gaps = 25/383 (6%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+ + +LVD L + + + +M + G++ L+ GL G A+
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+L + + + + + Y + GK+G +A+ F M + P+I A ++
Sbjct: 423 KLLGTMESVGVQ---PTAYTYNIFIDYFGKSGETGKAVETFEKMKAK-GIVPNIVACNAS 478
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+L ++G L+E +K + N R+N L PD V YN ++ Q
Sbjct: 479 LYSLAEMGRLRE------------AKTMFNGLRENG---LAPDSVTYNMMMKCYSKVGQV 523
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ ++ ++G +P ++ + ++G+ D + F +M + +TY L
Sbjct: 524 DEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTL 583
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ +EG++ +A+ +M ++ + L C C N + A+ + K+ ++
Sbjct: 584 LSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM-TVMD 642
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML----KVYSRNDMFS 506
KP +T+ +I + ++ F +K P+ T+ +L K D S
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAIS 702
Query: 507 KAKE-LFEETTRANSSGYTFLSG 528
A++ +++ R N S + L G
Sbjct: 703 IARDFMYQVRFRVNRSFWEDLMG 725
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 127/325 (39%), Gaps = 15/325 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P L YN ++ + H + + +FK ++ G P A T+ + + V +SGK +
Sbjct: 784 ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E +++M A+TY +++ + + +++A+ ++ T Y L L
Sbjct: 844 ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
GR ++AM + E++ S KP F LI G + +F+ M + P+
Sbjct: 904 AKVGRLEEAMRLFEEM-SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + ++ D A R + + Y F L PD Y+ ++
Sbjct: 963 LKSYTILV------DCLCLAG-------RVDEALYYFNELKSTGLDPDFIAYNRIINGLG 1009
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + E +Y M G D + L++ AG + ++ L AG P
Sbjct: 1010 KSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVF 1069
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM 633
+ ++ + N E A + M
Sbjct: 1070 TYNALIRGYSLSENPEHAYTVYKNM 1094
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 106/279 (37%), Gaps = 23/279 (8%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+R + +A +++ L++ K F + S T L+ GL G +
Sbjct: 852 RRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEE 911
Query: 209 AMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
AM + + + YG K + ++ L+ GK G A ++F M+ + + PD+ +
Sbjct: 912 AMRLFEEMSDYGCK-----PNCAIFNILINGYGKIGDTETACQLFKRMVNE-GIRPDLKS 965
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y + L G + E + ++ L+PD + YN ++N
Sbjct: 966 YTILVDCLCLAGRVDEALYYFNELKSTG---------------LDPDFIAYNRIINGLGK 1010
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
S + + ++ ++R G+ P TY M + +G + + ++ +G T
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
Y L+R + A +NM G Y +L
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 196/470 (41%), Gaps = 51/470 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL D+G +A+S+LD + + S YT LL + K+ +A+ + + M
Sbjct: 182 IIRGLCDRGRVGEALSLLD---DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 238
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P+I Y+ + + + G + + + + R+ +PD
Sbjct: 239 AKGCT--PNIVTYNVIINGMCREGRVDDAREFLNRLSSYG---------------FQPDT 281
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V Y VL + +W+ V +F ++ + P+ T+ + + + G + + +
Sbjct: 282 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 341
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M+ G A +++ ++G++++A + NM G Y + LC R
Sbjct: 342 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 401
Query: 435 WQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
W+DA L+ E ++ ++ P E+TF I G I+ + + M +H CE NI T
Sbjct: 402 WEDAKELLKEMVR--KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 459
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
NA++ + A ELF Y+ P KP+ TY+++L A +
Sbjct: 460 NALVNGFCVQGRVDSALELF----------YSM------PCKPNTITYTTLLTGLCNAER 503
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLF 609
+ + M C + L+ + G L++ A + ++E G P+ +
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKG---LMDEAIELVEQMMEHGCTPNLIT 560
Query: 610 FTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 656
+ +L N E+A+ L++ + +P +T + S EDR+
Sbjct: 561 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL-SREDRV 609
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 160/411 (38%), Gaps = 75/411 (18%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V + +SG Y + + G+ D M + +A TY ++R
Sbjct: 131 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDA---YTYTPIIRGLC 187
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G++ EA++ + +M RG + Y L +C + + AM V++++++ + P
Sbjct: 188 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA-KGCTPNI 246
Query: 456 ITFTGLIISSMDGGHIDD---------------------------CIS--------IF-Q 479
+T+ +I G +DD C + +F +
Sbjct: 247 VTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAE 306
Query: 480 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE---------TTRAN----------- 519
M+ +C PN T + +++ + R M +A ++ E+ TT N
Sbjct: 307 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 366
Query: 520 -SSGYTFLSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+ FL+ G+ PD +Y+++L+ A +WE + + K M C ++
Sbjct: 367 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426
Query: 578 LLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + G L+E A + + E G + + + ++ VQ + A+ L +M
Sbjct: 427 FICILCQKG---LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 483
Query: 635 YAPFHITERQWTELFE--SNEDRI--SRDKLEKLLNALCNCNAASSEITVS 681
P IT +T L N +R+ + + L ++L C N + + VS
Sbjct: 484 CKPNTIT---YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 531
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 34/245 (13%)
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
GEA L+R G+ ++A +R E+ G Y L C G+ A
Sbjct: 104 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 163
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
++ + P T+T +I D G + + +S+ M C+P++ T +L+
Sbjct: 164 RRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 219
Query: 498 VYSRNDMFSKAKELFEET----TRANSSGYTF--------------------LSGDGAPL 533
++ F +A E+ +E N Y LS G
Sbjct: 220 AVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG--F 277
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
+PD +Y+++L+ A +WE E ++ M C ++ L+ R G ++E
Sbjct: 278 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG---MVER 334
Query: 594 AFDSL 598
A L
Sbjct: 335 AIQVL 339
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 179/427 (41%), Gaps = 40/427 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F +T ++ + AG A+ M D P++ Y ++ + L+E +KL+E
Sbjct: 26 FTHTPIITAMANAGDLDGAMDHLRSMGCD----PNVVTYTALIAAFARAKKLEEAMKLLE 81
Query: 289 RMRQK--PSKRI------------------KNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
MR++ P + +++ +K + P+++ +N++++
Sbjct: 82 EMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRG 141
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ + G++P+ TY ++ + +S K+ E +M SG A TY
Sbjct: 142 NVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYS 201
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ + KI EA +R M G VY + C +G+ +A +++++
Sbjct: 202 ALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ 261
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFS 506
R S P +T+ +I G I + I M++ + P++ T + ++ ++DM
Sbjct: 262 RKS-PDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLV 320
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+A++L + +A + PD TY+++++ + E EY+ +GM +
Sbjct: 321 EAQKLLDRMCKAGCN-------------PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRA 367
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
GC + + L+ +A K E + + AG P+ + + M+ V ++A
Sbjct: 368 GCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEA 427
Query: 627 VALINAM 633
L+ M
Sbjct: 428 QQLVQRM 434
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 138/345 (40%), Gaps = 30/345 (8%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
LVD +R K + IM G+ L+ GL + +A VL+ +K
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE---MK 189
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
F Y+ L+ L KA + EA ++ M PD+ Y S+ + G L
Sbjct: 190 ASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS-GCTPDVVVYSSIIHAFCKSGKL 248
Query: 281 KELVKLIERMRQK-----------------------PSKRIKNMHRKNWDPVLEPDLVVY 317
E K ++ MR++ ++ I + +++ D + PD+V Y
Sbjct: 249 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVL--PDVVTY 306
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
+ V+N S + ++ K+G P TY ++ + + G+ + + M +
Sbjct: 307 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+G A +TY L+ + K++EA + M G Y + LC +GR ++
Sbjct: 367 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 426
Query: 438 AMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
A +V+++K R P T+ ++ + M + + + + M
Sbjct: 427 AQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 167/407 (41%), Gaps = 31/407 (7%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
RF Y L+ G++G+ A+ +F M + PD Y + LG+ G ++E
Sbjct: 100 RFAYNVLIRYFGRSGQLDSAMEMFREM-KIKGSEPDEYTYGFLVNALGKAGRVQEARSFF 158
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ M ++ L P++ YN +++A Q +F ++++ G +P
Sbjct: 159 DAMLERG---------------LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQP 203
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
S TY + ++ + +G+ + F KM G + + TY LV + G++ EA
Sbjct: 204 SVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVF 263
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
R M RGV Y L L G D + + K S + P +F ++ +
Sbjct: 264 REMVDRGVAVDLVNYNSLLATLAKAGNM-DRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
D +F M + C+P++ + N ++ Y+R ++A+++ EE A G+
Sbjct: 323 ANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEA---GFI-- 377
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
P+ TY+S++ AT Q + V + M +GC+ D + L+ + G
Sbjct: 378 --------PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ F + + G P L + + ++A+ L M
Sbjct: 430 ENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 173/430 (40%), Gaps = 67/430 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ G G AM + +K K + Y L+ LGKAGR EA F+ ML
Sbjct: 106 LIRYFGRSGQLDSAMEMFRE---MKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAML 162
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E L P+I Y+ + +VG L + L M+++ +P +V
Sbjct: 163 ER-GLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG---------------FQPSVV 206
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+A + + +F ++ G P + TY + + +SG+ + H+ FR+M
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREM 266
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG-------------VVGTAS-- 420
G A+ + Y L+ + G ++ ++ M ++G +G A+
Sbjct: 267 VDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKP 326
Query: 421 -----VYYELACCLC------------NNGRWQDAMLVVEKIKSLRHSK--PLEITFTGL 461
V+ + C + R+ DA + ++ + + P T+ L
Sbjct: 327 DAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSL 386
Query: 462 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
I G +D+ ++ + M+ C P++ T N ++ + + +A LF++
Sbjct: 387 IHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG- 445
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
++PD +Y+ ++ A + + ++K M GC +D+ + L+
Sbjct: 446 ------------VEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIR 493
Query: 581 EASRAGKCHL 590
A RAG L
Sbjct: 494 AAHRAGDTEL 503
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/406 (19%), Positives = 166/406 (40%), Gaps = 31/406 (7%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
KL+ G+ + +A +FN E P + A+ + L G + + +++
Sbjct: 34 VKLITAYGRGNKSGDAFDLFN-QAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLV 92
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
QK + D YN ++ S Q +F++++ G +P T
Sbjct: 93 QKGC---------------QLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYT 137
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
YG + + ++G+ FF M + G TY +L+ AF + G+++ A+ M+
Sbjct: 138 YGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+RG + Y L LC+ GR A + K+ P T++ L+ G +
Sbjct: 198 RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTG-DGCSPDSYTYSTLVNGLGKSGRV 256
Query: 472 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
++ +F+ M D ++ N++L ++ + +L +E +R
Sbjct: 257 EEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKG----------- 305
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
PD ++++++++A A++ + V+ M SGC+ D + L+ +R G
Sbjct: 306 --FHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQ 363
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
+ ++EAG IP + ++ ++A A++ M A
Sbjct: 364 ARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/381 (17%), Positives = 146/381 (38%), Gaps = 56/381 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P+ +V ++ A ++ F +F Q P+ + +++++ SG+++
Sbjct: 28 LRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAE 85
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
++K+ + G + Y VL+R F G+++ A+ R M+ +G
Sbjct: 86 LVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG--------------- 130
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
S+P E T+ L+ + G + + S F M + PN
Sbjct: 131 ---------------------SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPN 169
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I T N ++ + + A LF E R +P TY+ +L+A
Sbjct: 170 IPTYNLLMDAFRKVGQLDMALGLFAEMKRRG-------------FQPSVVTYNILLDALC 216
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+A + ++ M GC D ++ L+ ++G+ F +++ G +
Sbjct: 217 SAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLV 276
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE----SNEDRISRDKLEKL 664
+ +L N ++ L+ M+ FH + + + +N+ +R+ ++
Sbjct: 277 NYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARM 336
Query: 665 LNALCNCNAASSEITVSNLSR 685
+ + C + S I + + +R
Sbjct: 337 VESGCKPDLISYNILIDSYAR 357
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 196/470 (41%), Gaps = 51/470 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL D+G +A+S+LD + + S YT LL + K+ +A+ + + M
Sbjct: 151 IIRGLCDRGRVGEALSLLD---DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P+I Y+ + + + G + + + + R+ +PD
Sbjct: 208 AKGCT--PNIVTYNVIINGMCREGRVDDAREFLNRLSSYG---------------FQPDT 250
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V Y VL + +W+ V +F ++ + P+ T+ + + + G + + +
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M+ G A +++ ++G++++A + NM G Y + LC R
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370
Query: 435 WQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
W+DA L+ E ++ ++ P E+TF I G I+ + + M +H CE NI T
Sbjct: 371 WEDAKELLKEMVR--KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
NA++ + A ELF Y+ P KP+ TY+++L A +
Sbjct: 429 NALVNGFCVQGRVDSALELF----------YSM------PCKPNTITYTTLLTGLCNAER 472
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLF 609
+ + M C + L+ + G L++ A + ++E G P+ +
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKG---LMDEAIELVEQMMEHGCTPNLIT 529
Query: 610 FTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 656
+ +L N E+A+ L++ + +P +T + S EDR+
Sbjct: 530 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL-SREDRV 578
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 160/411 (38%), Gaps = 75/411 (18%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V + +SG Y + + G+ D M + +A TY ++R
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDA---YTYTPIIRGLC 156
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G++ EA++ + +M RG + Y L +C + + AM V++++++ + P
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA-KGCTPNI 215
Query: 456 ITFTGLIISSMDGGHIDD---------------------------CIS--------IF-Q 479
+T+ +I G +DD C + +F +
Sbjct: 216 VTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAE 275
Query: 480 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE---------TTRAN----------- 519
M+ +C PN T + +++ + R M +A ++ E+ TT N
Sbjct: 276 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335
Query: 520 -SSGYTFLSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+ FL+ G+ PD +Y+++L+ A +WE + + K M C ++
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 578 LLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + G L+E A + + E G + + + ++ VQ + A+ L +M
Sbjct: 396 FICILCQKG---LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 452
Query: 635 YAPFHITERQWTELFE--SNEDRI--SRDKLEKLLNALCNCNAASSEITVS 681
P IT +T L N +R+ + + L ++L C N + + VS
Sbjct: 453 CKPNTIT---YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 500
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 34/245 (13%)
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
GEA L+R G+ ++A +R E+ G Y L C G+ A
Sbjct: 73 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
++ + P T+T +I D G + + +S+ M C+P++ T +L+
Sbjct: 133 RRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 188
Query: 498 VYSRNDMFSKAKELFEET----TRANSSGYTF--------------------LSGDGAPL 533
++ F +A E+ +E N Y LS G
Sbjct: 189 AVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG--F 246
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
+PD +Y+++L+ A +WE E ++ M C ++ L+ R G ++E
Sbjct: 247 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG---MVER 303
Query: 594 AFDSL 598
A L
Sbjct: 304 AIQVL 308
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 166/405 (40%), Gaps = 31/405 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL+ G EA +F M+E + P+I Y + T G++G L+++ L++
Sbjct: 256 TYNTLLSACAARGLGDEAEMVFKTMIEG-GIVPEITTYSYIVETFGKLGKLEKVAMLLKE 314
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + PD+ YN ++ A K VFKQ++ +G P+A
Sbjct: 315 MESEG---------------YLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNA 359
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+TY + + + + G+YD V E F +M +S A TY +L+R F E G E V +
Sbjct: 360 STYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHD 419
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ + Y L G +DA ++ + + P ++GLI +
Sbjct: 420 LVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNG-KGIVPSSKAYSGLIEAYGQAA 478
Query: 470 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
D+ + F M + + I T N+++ ++R ++ KE +R G
Sbjct: 479 LYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLY---KEFEAILSRMREYG------ 529
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ + ++S ++E + Q+E + M C+LD+ +L AG
Sbjct: 530 ----ISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLV 585
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ F + +G +P L + ML ++ A L++ M
Sbjct: 586 DESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEM 630
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 195/458 (42%), Gaps = 47/458 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++++LG+ G + IF+
Sbjct: 118 VFKEFAARGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFD 172
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-RQKPSKRIKNMHRK------- 304
M + + +Y ++ G+ G + ++L+ERM R++ S I +
Sbjct: 173 EMASQ-GVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 231
Query: 305 --NWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+W+ +L +PDLV YN +L+AC VFK + + G+ P T
Sbjct: 232 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 291
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y +E + GK + V ++M G +Y VL+ A + G I EA+ + M+
Sbjct: 292 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
G V AS Y L +GR+ D + ++K ++P T+ LI +GG+
Sbjct: 352 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKE-SSAEPDATTYNILIRVFGEGGYF 410
Query: 472 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ +++F + D + +PN+ T ++ + + AK++ +G
Sbjct: 411 KEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKI-------------LFHMNG 457
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ P YS ++EA A ++ + M G + + L+ +R G
Sbjct: 458 KGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKE 517
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAV 627
E + E G + F+ +I+ QS YE+A+
Sbjct: 518 FEAILSRMREYGISRNAKSFSG-IIEGYRQSGQYEEAI 554
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 138/351 (39%), Gaps = 30/351 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ LL + GK GR + +F L +++ + PD Y+ + G+ G KE+V L
Sbjct: 361 TYSILLNLYGKHGRYDDVRELF-LQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHD 419
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ D ++P++ Y ++ AC + + + G+ PS+
Sbjct: 420 LV---------------DENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSS 464
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E Q+ YD F M + G TY L+ F G E A +
Sbjct: 465 KAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSR 524
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + G+ A + + +G++++A+ +++ +R E T G++ G
Sbjct: 525 MREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELD-EQTLEGVLGVYCFAG 583
Query: 470 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+D+ F +K P++ ML VY++N + A EL +E + S + G
Sbjct: 584 LVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIG 643
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ +Y S W+ EYV+ + GC + LL
Sbjct: 644 Q---MIKGDYDDDS---------NWQMVEYVFDKLNAEGCGFGMRFYNTLL 682
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 179/418 (42%), Gaps = 41/418 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLED-----CNLYPDIAAYHSVAVTLGQVGLLKELV 284
Y LL L G A+++ ML + P++ Y ++ +L + GL+ +
Sbjct: 199 TYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGK 258
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L M+ + + PD+V Y+++++ + +W+G +F ++ G
Sbjct: 259 ELFLEMKGRG---------------ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ P+ T+ + ++ + ++GK + + + M + GE+ TY L+ F EG+I++A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ME +G+ A Y L C +GR +A + ++ + P IT+ L+
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMC-KEIMPTVITYNTLLTG 422
Query: 465 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G + D ++F MK H P T N +L +N+ S+A ELF +
Sbjct: 423 LFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD---- 478
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+P ++ +++ A + E ++ ++ G + + + ++
Sbjct: 479 ---------FQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529
Query: 584 RAGKCHLLEHAFDSLL---EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
++G+ LE+A D L E G P+ + F ++ +K V L+ MA F
Sbjct: 530 KSGQ---LENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDF 584
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 87/192 (45%), Gaps = 16/192 (8%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
K + + Y LL L + G+ +A +F M +L P+ Y+ + L + L
Sbjct: 407 KEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVH-DLTPESCTYNILLDGLCKNNHLS 465
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
E ++L + +N D +P + ++N +++ + + + +F +L
Sbjct: 466 EAMELFHYL-------------ENHD--FQPSIQIFNCLIDGLCKARKIEIARELFNRLS 510
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
GL+P+ TY + + + +SG+ + + F M + G A +T+ L+R F + ++
Sbjct: 511 HEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQ 570
Query: 402 EAVAAVRNMEQR 413
+ V ++ M ++
Sbjct: 571 KVVELLQEMAEK 582
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/349 (17%), Positives = 128/349 (36%), Gaps = 37/349 (10%)
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
EA +FN ++ D P I++++++ + ++ +++ L +RM
Sbjct: 75 EAFSVFNHLI-DMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIG----------- 122
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
L PD + N ++N ++ V ++ + G P+ T+ ++ + +
Sbjct: 123 ----LAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRI 178
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
RKM + G +TY L+ G AV M ++ L
Sbjct: 179 SEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNL 238
Query: 426 AC-C-----LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
C C LC +G + ++K R P + ++ +I G + +F
Sbjct: 239 VCYCTIIDSLCKDGLIDKGKELFLEMKG-RGISPDVVAYSSIIHGMCHTGRWEGAKGLFN 297
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M D PN+ T N ++ + +A L + + S PD +
Sbjct: 298 EMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGES-------------PDTF 344
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
TY+++++ + + ++ M G + D + L+ ++G+
Sbjct: 345 TYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGR 393
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 166/405 (40%), Gaps = 31/405 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL+ G EA +F M+E + P+I Y + T G++G L+++ L++
Sbjct: 256 TYNTLLSACAARGLGDEAEMVFKTMIEG-GIVPEITTYSYIVETFGKLGKLEKVAMLLKE 314
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + PD+ YN ++ A K VFKQ++ +G P+A
Sbjct: 315 MESEG---------------YLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNA 359
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+TY + + + + G+YD V E F +M +S A TY +L+R F E G E V +
Sbjct: 360 STYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHD 419
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ + Y L G +DA ++ + + P ++GLI +
Sbjct: 420 LVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNG-KGIVPSSKAYSGLIEAYGQAA 478
Query: 470 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
D+ + F M + + I T N+++ ++R ++ KE +R G
Sbjct: 479 LYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLY---KEFEAILSRMREYG------ 529
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ + ++S ++E + Q+E + M C+LD+ +L AG
Sbjct: 530 ----ISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLV 585
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ F + +G +P L + ML ++ A L++ M
Sbjct: 586 DESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEM 630
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 195/458 (42%), Gaps = 47/458 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++++LG+ G + IF+
Sbjct: 118 VFKEFAARGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFD 172
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-RQKPSKRIKNMHRK------- 304
M + + +Y ++ G+ G + ++L+ERM R++ S I +
Sbjct: 173 EMASQ-GVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 231
Query: 305 --NWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+W+ +L +PDLV YN +L+AC VFK + + G+ P T
Sbjct: 232 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 291
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y +E + GK + V ++M G +Y VL+ A + G I EA+ + M+
Sbjct: 292 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
G V AS Y L +GR+ D + ++K ++P T+ LI +GG+
Sbjct: 352 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKE-SSAEPDATTYNILIRVFGEGGYF 410
Query: 472 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ +++F + D + +PN+ T ++ + + AK++ +G
Sbjct: 411 KEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKI-------------LFHMNG 457
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ P YS ++EA A ++ + M G + + L+ +R G
Sbjct: 458 KGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKE 517
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAV 627
E + E G + F+ +I+ QS YE+A+
Sbjct: 518 FEAILSRMREYGISRNAKSFSG-IIEGYRQSGQYEEAI 554
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 138/351 (39%), Gaps = 30/351 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ LL + GK GR + +F L +++ + PD Y+ + G+ G KE+V L
Sbjct: 361 TYSILLNLYGKHGRYDDVRELF-LQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHD 419
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ D ++P++ Y ++ AC + + + G+ PS+
Sbjct: 420 LV---------------DENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSS 464
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E Q+ YD F M + G TY L+ F G E A +
Sbjct: 465 KAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSR 524
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + G+ A + + +G++++A+ +++ +R E T G++ G
Sbjct: 525 MREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELD-EQTLEGVLGVYCFAG 583
Query: 470 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+D+ F +K P++ ML VY++N + A EL +E + S + G
Sbjct: 584 LVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIG 643
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ +Y S W+ EYV+ + GC + LL
Sbjct: 644 Q---MIKGDYDDDS---------NWQMVEYVFDKLNAEGCGFGMRFYNTLL 682
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 119/558 (21%), Positives = 224/558 (40%), Gaps = 60/558 (10%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWV---YGLKDKR--DLKSRFVYTKLLAILGKAGRP 244
E + LLKGL G+W +A + +WV +G ++ + D F ++ +LG+ +
Sbjct: 163 ESDITGLLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDDQSVEF----MVKMLGRESQY 218
Query: 245 HEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
A ++F+++ +E+ +L D+ A +V + G K +++ E+M++
Sbjct: 219 SIASKLFDIIPVEEYSL--DVKACTTVLHAYARTGKYKRAIEIFEKMKETG--------- 267
Query: 304 KNWDPVLEPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
L+P LV YN +L+ W + + ++R GL+ T + +
Sbjct: 268 ------LDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGRE 321
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G D FF + +G G TY +++ F + G EA+ ++ ME A Y
Sbjct: 322 GILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITY 381
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
EL G + V++ + S + P IT+T +I + G D + +F MK
Sbjct: 382 NELVAAYVRAGFHDEGAAVIDTMAS-KGVMPNAITYTTVINAYGKAGDADKALEVFGQMK 440
Query: 483 D-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
+ C PN+ T N +L + + S+++++ + + +G P PD T++
Sbjct: 441 ELGCVPNVCTYNNVLVLLGKR---SRSEDMIKILCD--------MKLNGCP--PDRITWN 487
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
+ML + ++ V + M G + D+ L+ R G + + ++ A
Sbjct: 488 TMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAA 547
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL 661
G P + +L + N++ A +++ M F E ++ L + L
Sbjct: 548 GFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGL 607
Query: 662 EK---------------LLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFG 706
EK LL L N ++ + RA H L + + D+
Sbjct: 608 EKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQL--KGMERAFHQLQNNGYKLDMVVINSML 665
Query: 707 SQAIDISPLHGIHEAFDV 724
S + L HE DV
Sbjct: 666 SMFVRNQKLEKAHEMLDV 683
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 170/417 (40%), Gaps = 39/417 (9%)
Query: 199 GLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
G D+G+ +V+D + K + + YT ++ GKAG +AL +F M ++
Sbjct: 392 GFHDEGA-----AVID---TMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQM-KEL 442
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
P++ Y++V V LG+ ++++K++ M+ N P PD + +N
Sbjct: 443 GCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKL------------NGCP---PDRITWN 487
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+L C + K V V ++++ G +P T+ + + G V + + +M +
Sbjct: 488 TMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAA 547
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G TY L+ A G A + V +M ++G + Y L C G +
Sbjct: 548 GFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGL 607
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLK 497
V +I H P + L++++ + F ++++ + ++ +N+ML
Sbjct: 608 EKVEMEIYD-GHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLS 666
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
++ RN KA E+ + +SG L+P+ TY+S+++ A E
Sbjct: 667 MFVRNQKLEKAHEMLD---------VIHVSG----LQPNLVTYNSLIDLYARVGDCWKAE 713
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ K + SG D + ++ + G + G P P+ F +
Sbjct: 714 EMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFM 770
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 115/268 (42%), Gaps = 22/268 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L +G+W+ A SV V ++ K + Y+ LL KAG L + +
Sbjct: 559 LLNALARRGNWKAAESV---VLDMRKKGFKPNETSYSLLLHCYSKAGNVR-GLEKVEMEI 614
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D +++P ++ +T + LK + + +++ K D+V
Sbjct: 615 YDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKL---------------DMV 659
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
V N++L+ V + + + + + SGL+P+ TY +++ + G E + +
Sbjct: 660 VINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDI 719
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
SG + ++Y +++ F ++G + EA+ + M GV + C NG +
Sbjct: 720 QNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLF 779
Query: 436 QDAMLVVEKIKSLRHS-KPLEITFTGLI 462
+A V+ + + H P E+T+ +I
Sbjct: 780 AEADEVIRYM--IEHGCMPNELTYKIVI 805
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 78/192 (40%), Gaps = 23/192 (11%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ--KPSKR 297
K + HE L + ++ L P++ Y+S L+ L R+ K +
Sbjct: 673 KLEKAHEMLDVIHV----SGLQPNLVTYNS-------------LIDLYARVGDCWKAEEM 715
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+K++ + PD+V YN V+ + + ++ +G++P T+ M
Sbjct: 716 LKDIQNSG----ISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMS 771
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+G + E R M + G LTYK+++ + + K EA+ V +++ +
Sbjct: 772 CYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDISF 831
Query: 418 TASVYYELACCL 429
+LA C+
Sbjct: 832 DDQSLKKLASCI 843
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/556 (19%), Positives = 226/556 (40%), Gaps = 49/556 (8%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL 186
+D ++ + +F +W ++R + ++ + L+ L E + WK ++ M +S
Sbjct: 103 IDVEINVKIQFF----KWAGKRRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSST 158
Query: 187 MFTEGQML-KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
L +++K LG +A+SV Y +K ++ + Y ++ +L + G
Sbjct: 159 CVISSVYLSEIVKLLGKAKMVNKALSVF---YQIKGRKCKPAATTYNSMILMLKQEGHLE 215
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIK--- 299
+ I+N M D N +PD Y ++ G++G ++L + M++ P+ +I
Sbjct: 216 KVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTL 275
Query: 300 --------------NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ ++ D + Y + + + + VF + K G
Sbjct: 276 LGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGC 335
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAV 404
KP + ++ + G+ ++ + FRKM +TY +++A +E + +EA
Sbjct: 336 KPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAA 395
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ M+ G+ ++ Y L C R + A+L++E++ + P + LI S
Sbjct: 396 SWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDE-KGFPPCPAAYCSLINS 454
Query: 465 SMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ +F +K++C + V A M+K + + S+A +LF E + S
Sbjct: 455 LGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGS--- 511
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
KPD Y Y++++ A + + + + M +GC D H +L +
Sbjct: 512 ----------KPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLA 561
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
R G F + + P + + +L +E+A L+ M F
Sbjct: 562 RTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNI 621
Query: 644 QWTELFES----NEDR 655
+T + E+ +EDR
Sbjct: 622 TYTSILEAVGKVDEDR 637
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/540 (21%), Positives = 218/540 (40%), Gaps = 102/540 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L+ L +G +A+++ D L+ ++ R Y+ L+ L K R AL + + M
Sbjct: 164 VLRSLCARGDLDRAVTLFD---SLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMP 220
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD+ Y+++ + G ++++++ +++ + P R P+L
Sbjct: 221 RS-RVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGAR--------------PNLA 265
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+ ++K V V++++ + L+P TYG+ + + +SG D + ++
Sbjct: 266 TYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEI 325
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEA--------VAAVRNME----------QRGVVG 417
K+G I A Y LV+ F + G++ EA A +RN+ G+V
Sbjct: 326 IKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVD 385
Query: 418 TASVYYEL-----ACC------------LCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFT 459
A ++L AC LC NG A + E+ + K L++ +++
Sbjct: 386 EAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARV--SGKQLDVFSYS 443
Query: 460 GLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML----KVYSRNDMFSKAKELFEE 514
+I + G + D + +++ M KD C+PN NA++ +VY +D ++ +
Sbjct: 444 SMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADN 503
Query: 515 TTRANSSGYTFLSGDGA-------------------PLKPDEYTYSSMLEASATAHQWEY 555
Y L DG PD TY S++ + + +
Sbjct: 504 GCSPTVITYNTLI-DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDD 562
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
++K + G ++D H L+ AGK H F + E P L L+
Sbjct: 563 ALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLM 622
Query: 616 QAIVQSNY-EKAVALINAMAYAPFHITERQWTELFESN--EDRISRDKLEKLLNALCNCN 672
+ ++ Y +KA L WT + E D IS + K LC+C+
Sbjct: 623 DGLYETGYIDKAATL---------------WTSITEDGLEPDIISYNTRIK---GLCSCD 664
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 149/324 (45%), Gaps = 25/324 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KGL D G +A+ + D + KD + + L+ L + G ++A IF
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLE--KDVACIPDTVTFGTLIHGLCQNGFANKAFTIF---- 427
Query: 256 EDCNLYP---DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
E+ + D+ +Y S+ L VG L + VK+ E+M + K P
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK---------------P 472
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+ +YNA+++ ++ ++ ++ +G P+ TY ++ + ++ KY
Sbjct: 473 NSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVA 532
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R+M ++G TY L+R + + KI++A++ + + +G+ ++ L LC+
Sbjct: 533 REMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSA 592
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
G+ +A+ V +K ++ P +T+ L+ + G+ID +++ + +D EP+I +
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652
Query: 492 VNAMLKVYSRNDMFSKAKELFEET 515
N +K D + +L +E
Sbjct: 653 YNTRIKGLCSCDRIHEGIQLLDEV 676
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
LVV +A A +P F+ L G P ++ ++ +++ ++ FF
Sbjct: 87 LVVLSAFSRAIMPDAALDA----FRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFF 142
Query: 373 RKMAKS--GEAIGA--LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
++ G I TY +++R+ G ++ AV ++ +R V Y L C
Sbjct: 143 ASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCG 202
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KD-HCE 486
L R A+ +++++ R +P + + L+ G + + ++ + KD
Sbjct: 203 LAKQDRLDHALDLLDEMPRSR-VQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGAR 261
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ T N ML + F + E++E N L+PD TY ++
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANN-------------LQPDVITYGILIHG 308
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ + VY + +G +D + L+ +AG+
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 155/349 (44%), Gaps = 40/349 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV-----AVTLGQVGL----- 279
Y L+ + R + A ++ + M ++ N+ PD Y ++ A Q G+
Sbjct: 621 TYNSLIDACVRCNRLNSAWQLLSEMQQN-NIVPDNFTYSTLIKGIRAENQSQNGISNPMD 679
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L++ L+E+M+Q + ++PD ++YN +++ACV H VF++
Sbjct: 680 LEKAFALLEQMKQS-------------NGGVKPDEILYNCLIDACVRFHDVNRAVAVFQE 726
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ S +KPS+ TYG+ ++ + + D F+KM + ++TY L+ A + +
Sbjct: 727 MQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQ 786
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
I A+ M++ GV ++ L + + A+ V + +K KP +TF
Sbjct: 787 IERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFN 846
Query: 460 GLIISSMDGGHIDDCISIFQHMK---DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
LI + I + IF+ MK H +P++ T + M+K + R +A + +
Sbjct: 847 SLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDME 906
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+ N + DE Y+S+L+ A++ E VYK M +
Sbjct: 907 KNN-------------IMADEVLYNSLLDGCCKANEIEMALKVYKNMEI 942
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 154/398 (38%), Gaps = 46/398 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++D S+ AK + M G+ T L+ G+ QA VL+ +K
Sbjct: 407 IIDGCSKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQ---MK 463
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHE---ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+K+ + Y+ L + + + A ++N + + PD ++ +
Sbjct: 464 EKQVKPDNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINC 523
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE------------------------PD 313
L V+L ++++ + +I+ + + D L PD
Sbjct: 524 KQLDRAVELFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPD 583
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ +N ++ C + + F +F ++ LKP+ TY ++ ++ + + +
Sbjct: 584 EISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLLS 643
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGK----------INEAVAAVRNMEQ-RGVVGTASVY 422
+M ++ TY L++ E + + +A A + M+Q G V +
Sbjct: 644 EMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEIL 703
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y C R+ D V + ++ S KP +T+ LI + +D+ +F+
Sbjct: 704 YNCLIDAC--VRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKK 761
Query: 481 MKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
MKD+C PN T ++ +N+ +A E+FE R
Sbjct: 762 MKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKR 799
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/468 (16%), Positives = 172/468 (36%), Gaps = 98/468 (20%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
W+ + M Q+ ++ L+KG+ + + G+ + DL+ F +
Sbjct: 639 WQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQN---------GISNPMDLEKAFALLEQ 689
Query: 235 LAILGKAGRPHEALRIFNLMLEDC-------------------NLYPDIAAYHSVAVTLG 275
+ +P E L +N +++ C N+ P Y + G
Sbjct: 690 MKQSNGGVKPDEIL--YNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYG 747
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
L + ++M+ D L P+ V Y +++ACV ++Q +
Sbjct: 748 SANQLDNAFFVFKKMK---------------DNCLIPNSVTYGCLIDACVKNNQIERAME 792
Query: 336 VFKQLRKSG------------------------------------LKPSAATYGLAMEVM 359
VF+ +++ G +KP+ T+ ++
Sbjct: 793 VFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCC 852
Query: 360 LQSGKYDLVHEFFRKMAK--SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
++ E F +M + S +TY +++ F E I +A+ + +ME+ ++
Sbjct: 853 IRCNSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMA 912
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
+Y L C + A+ V + ++ L+ KP +T++ LI ++ + +
Sbjct: 913 DEVLYNSLLDGCCKANEIEMALKVYKNMEILK-IKPSNVTYSILIKIYGKQRNLPKALGV 971
Query: 478 FQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
+ M KD P + +L+ ++ A++LF + + G ++ D
Sbjct: 972 LEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDMR---------IQG----IRGD 1018
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
+ TY +M+ + +++ + K + S QL +L E ++
Sbjct: 1019 QLTYQTMINGCLYSQKFDSILILLKDASDSKVQLPHELSQNILTELNK 1066
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/337 (18%), Positives = 134/337 (39%), Gaps = 56/337 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++PD V+YN++++ C ++Q F ++ ++ G+ P+ T+ ++ ++SG D
Sbjct: 397 IKPDEVLYNSIIDGCSKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAW 456
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M + TY L + E QR + A V Y
Sbjct: 457 RVLEQMKEKQVKPDNYTYSTLFKGIKSEN-------------QRQDLEKAFVLY------ 497
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
++++ P EI F L+ + ++ +D + +F+ +K +P I
Sbjct: 498 -------------NQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELFKQLKPQSQPQI 544
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
N D + L + A ++ S + ++PDE +++++++ A
Sbjct: 545 QVSNT--------DDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISFNTIIKGCAQ 596
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE---IPH 606
+ + ++ M + + + + L+ R C+ L A+ L E + +P
Sbjct: 597 EKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVR---CNRLNSAWQLLSEMQQNNIVPD 653
Query: 607 PLFFTEML--IQAIVQS--------NYEKAVALINAM 633
++ ++ I+A QS + EKA AL+ M
Sbjct: 654 NFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQM 690
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 196/470 (41%), Gaps = 51/470 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL D+G +A+S+LD + + S YT LL + K+ +A+ + + M
Sbjct: 151 IIRGLCDRGRVGEALSLLD---DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P+I Y+ + + + G + + + + R+ +PD
Sbjct: 208 AKGCT--PNIVTYNVIINGMCREGRVDDAREFLNRLSSYG---------------FQPDT 250
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V Y VL + +W+ V +F ++ + P+ T+ + + + G + + +
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M+ G A +++ ++G++++A + NM G Y + LC R
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370
Query: 435 WQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
W+DA L+ E ++ ++ P E+TF I G I+ + + M +H CE NI T
Sbjct: 371 WEDAKELLKEMVR--KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
NA++ + A ELF Y+ P KP+ TY+++L A +
Sbjct: 429 NALVNGFCVQGRVDSALELF----------YSM------PCKPNTITYTTLLTGLCNAER 472
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLF 609
+ + M C + L+ + G L++ A + ++E G P+ +
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKG---LMDEAIELVEQMMEHGCTPNLIT 529
Query: 610 FTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 656
+ +L N E+A+ L++ + +P +T + S EDR+
Sbjct: 530 YNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL-SREDRV 578
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 160/411 (38%), Gaps = 75/411 (18%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V + +SG Y + + G+ D M + +A TY ++R
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDA---YTYTPIIRGLC 156
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G++ EA++ + +M RG + Y L +C + + AM V++++++ + P
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA-KGCTPNI 215
Query: 456 ITFTGLIISSMDGGHIDD---------------------------CIS--------IF-Q 479
+T+ +I G +DD C + +F +
Sbjct: 216 VTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAE 275
Query: 480 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE---------TTRAN----------- 519
M+ +C PN T + +++ + R M +A ++ E+ TT N
Sbjct: 276 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335
Query: 520 -SSGYTFLSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+ FL+ G+ PD +Y+++L+ A +WE + + K M C ++
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 578 LLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + G L+E A + + E G + + + ++ VQ + A+ L +M
Sbjct: 396 FICILCQKG---LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 452
Query: 635 YAPFHITERQWTELFE--SNEDRI--SRDKLEKLLNALCNCNAASSEITVS 681
P IT +T L N +R+ + + L ++L C N + + VS
Sbjct: 453 CKPNTIT---YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 500
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 34/245 (13%)
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
GEA L+R G+ ++A +R E+ G Y L C G+ A
Sbjct: 73 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
++ + P T+T +I D G + + +S+ M C+P++ T +L+
Sbjct: 133 RRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 188
Query: 498 VYSRNDMFSKAKELFEET----TRANSSGYTF--------------------LSGDGAPL 533
++ F +A E+ +E N Y LS G
Sbjct: 189 AVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG--F 246
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
+PD +Y+++L+ A +WE E ++ M C ++ L+ R G ++E
Sbjct: 247 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG---MVER 303
Query: 594 AFDSL 598
A L
Sbjct: 304 AIQVL 308
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 151/343 (44%), Gaps = 24/343 (6%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIM-NQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
++ V+V + F++ M NQ G + L+ GL G + A+ ++D
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTL 274
+ L++ D + Y +++ L K G EA+ + + M+ DC+ P+ Y+++ TL
Sbjct: 321 M--LQEGYD-PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS--PNTVTYNTLISTL 375
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ ++E +L + K + PD+ +N+++ + +
Sbjct: 376 CKENQVEEATELARVLTSKG---------------ILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+F+++R G +P TY + ++ + GK D ++M SG A +TY L+ F
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ K EA ME GV + Y L LC + R +DA +++++ + KP
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-IMEGQKPD 539
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 496
+ T+ L+ GG I I Q M + CEP+I T ++
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 129/299 (43%), Gaps = 24/299 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD +N ++N + K + + + G P TY + + + G+ E
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M + +TY L+ +E ++ EA R + +G++ + L LC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 490
+ AM + E+++S + +P E T+ LI S G +D+ +++ + M+ C ++
Sbjct: 413 TRNHRVAMELFEEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 491 TVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTFLSG--------DGAPL---- 533
T N ++ + + + +A+E+F+E +R + + T + G D A L
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 534 -----KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
KPD+YTY+S+L + + + M +GC+ D + L+ +AG+
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 167/430 (38%), Gaps = 47/430 (10%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
++L LG GS+ +L+ +K R + L+ + E L + + M
Sbjct: 88 EILLRLGRSGSFDDMKKILE---DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWM 144
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ L PD Y+ + L LK L+E I + W ++PD+
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLK----LVE---------ISHAKMSVWG--IKPDV 189
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+N ++ A +HQ + + + + GL P T+ M+ ++ G D +
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM-EQRGVVGTASVYYELACCLCNNG 433
M + G + ++ V+V F +EG++ +A+ ++ M Q G + L LC G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
+ A+ +++ + + P T+ +I G + + + + M C PN T
Sbjct: 310 HVKHAIEIMDVMLQEGYD-PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 493 NAMLKVYSRNDMFSKAKELFEETT------------------------RANSSGYTFLSG 528
N ++ + + +A EL T R + +
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
G +PDE+TY+ ++++ + + + + K M LSGC + L+ +A K
Sbjct: 429 KGC--EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 589 HLLEHAFDSL 598
E FD +
Sbjct: 487 REAEEIFDEM 496
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/489 (19%), Positives = 187/489 (38%), Gaps = 73/489 (14%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
KLL L ALR+FNL + N P+ A Y + + LG+ G ++ K++E M+
Sbjct: 51 VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 110
Query: 292 QKPSKRIKN------------------MHRKNW---DPVLEPDLVVYNAVLNACVPSHQW 330
+ + + +W + L+PD YN +LN V +
Sbjct: 111 SSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL 170
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
K V ++ G+KP +T+ + ++ + ++ + M G T+ +
Sbjct: 171 KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
++ + EEG ++ A+ M + G + + C GR +DA+ ++++ +
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 509
P + TF L+ GH+ I I M ++ +P++ T N+++ + +A
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
E+ ++ + S P+ TY++++ + C+
Sbjct: 351 EVLDQMITRDCS-------------PNTVTYNTLIS--------------------TLCK 377
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
+Q + A E +R L G +P F ++ + N+ A+ L
Sbjct: 378 ENQVEEA---TELARV------------LTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 630 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 689
M E + L +S S+ KL++ LN L + +V + +
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDS---LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 690 LCRSEKERD 698
C++ K R+
Sbjct: 480 FCKANKTRE 488
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 110/272 (40%), Gaps = 26/272 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
++ GL G ++A+ VLD + RD V Y L++ L K + EA + ++
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMI----TRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKN 305
+ PD+ ++S+ L + ++L E MR K P + NM +
Sbjct: 392 TSK-GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 306 WDPVLEP-----------DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
D L ++ YN +++ +++ + +F ++ G+ ++ TY
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + +S + + + +M G+ TY L+ F G I +A V+ M G
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L LC GR + A ++ I+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/296 (18%), Positives = 115/296 (38%), Gaps = 27/296 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
L+ L + + + R++ G++ L++GL + R AM + + +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE---M 426
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVG 278
+ K F Y L+ L G+ EAL + M L C + Y+++ +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA--RSVITYNTLIDGFCKAN 484
Query: 279 LLKELVKLIERMRQK-----------------PSKRIKNMHRKNWDPVLE---PDLVVYN 318
+E ++ + M S+R+++ + ++E PD YN
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
++L K + + + +G +P TYG + + ++G+ ++ + R +
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNG 433
G + Y +++ + + K EA+ R M ++ +V Y + LCN G
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/490 (20%), Positives = 209/490 (42%), Gaps = 38/490 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D L + + + + R M SG++ LL GL + QA+++L + +
Sbjct: 49 ILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAIL---HEM 105
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+D + Y L+ L K P A +F M + P + Y+++ L + G
Sbjct: 106 RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTGK 164
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L+ + L + M + S + D P+++ Y+ +++ +++ + +
Sbjct: 165 LERAMALFQEMLDRRSH--------DMDDRCSPNVITYSVLIDGLCKANRVSQAVELLES 216
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ G P TY + ++ + + K E R+M +G +TY L+ +
Sbjct: 217 MKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 276
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+++A+A +R+M RG Y L LC GR +DA ++ + + P + +
Sbjct: 277 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID-KGGTPDLMIYN 335
Query: 460 GLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI +D+ I++ + + +P++ T ++++ R++ +A L
Sbjct: 336 MLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL------ 389
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
++ G P PD YS++++ A + + +Y+ MA GC D ++ L
Sbjct: 390 -----LYVKSRGCP--PDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTL 442
Query: 579 ---LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAMA 634
L +A R + HLL ++ G P + + LI+ + N+ ++A+ L+ M
Sbjct: 443 IDGLCKAGRVDEAHLL---LARMVRMGTPPSTMTYNS-LIKGLCDLNHLDEAIELVEEME 498
Query: 635 ---YAPFHIT 641
AP +T
Sbjct: 499 RSNCAPSAVT 508
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 142/355 (40%), Gaps = 35/355 (9%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P+ +PD+ Y A+L + F ++R L P+ + ++ + ++ +
Sbjct: 3 PICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSID 62
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
FR M SG + Y L+ W+E ++++A+A + M G Y L
Sbjct: 63 ALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID 122
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH------- 480
LC N A + E +KS+ S P +T+ L+ G ++ +++FQ
Sbjct: 123 GLCKNNEPDRAQELFEHMKSVECS-PSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH 181
Query: 481 -MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS----GYTFLSGDG----- 530
M D C PN+ T + ++ + + S+A EL E S YT L DG
Sbjct: 182 DMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILV-DGLCKES 240
Query: 531 --------------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
A P+ TY+S+L A + + + M GC + +
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALI 630
L+ + G+ +++ G P + + MLI + +++ ++++AL+
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY-NMLINGLCKADQVDESIALL 354
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 144/355 (40%), Gaps = 40/355 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LVD L + A W+ +R M +G + LL GL A++++
Sbjct: 231 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM------ 284
Query: 220 KDKRDLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
RD+ R Y L+ L K GR +A + M++ PD+ Y+ +
Sbjct: 285 ---RDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK-GGTPDLMIYNMLING 340
Query: 274 LGQVGLLKELVKLIERMRQ---KP-----SKRIKNMHRKN-WDPVLE-----------PD 313
L + + E + L+ R KP S I + R N D PD
Sbjct: 341 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 400
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+++Y+ +++ + + F +++ + G TY ++ + ++G+ D H
Sbjct: 401 VILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 460
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M + G +TY L++ + ++EA+ V ME+ +A Y L +C
Sbjct: 461 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRME 520
Query: 434 RWQDAMLVVEKIKS---LRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH 484
R A++++E+ K+ L+ I ++ LI G + + + FQ M D+
Sbjct: 521 RVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDN 575
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+Y+ L+ L KAG+ EA ++ +M D C+ D+ Y ++ L + G + E L+
Sbjct: 402 ILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCD--ADVVTYSTLIDGLCKAGRVDEAHLLL 459
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
RM + + P + YN+++ + + +++ +S P
Sbjct: 460 ARMVRMGTP---------------PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 504
Query: 348 SAATYGLAMEVMLQSGKYD-----LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
SA TY + + M + + D L R +A G A+ + Y L+ + G++ E
Sbjct: 505 SAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAE 564
Query: 403 AVAAVRNMEQRGVV 416
A+ + M GV+
Sbjct: 565 ALDYFQEMIDNGVI 578
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 163/386 (42%), Gaps = 36/386 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
+L+ L D G +QAM VLD + +RD + YT L+ + +A+++ + M
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRML----QRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM 265
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
D PD+ Y+ + + + G L E +K + M PS +P++
Sbjct: 266 -RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM---PSSGC------------QPNV 309
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ +N +L + + +W + + + G PS T+ + + + + G + K
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K G +L+Y L+ F +E K++ A+ + M RG Y + LC +G+
Sbjct: 370 MPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVN 493
+DA+ ++ ++ S + P+ IT+ +I G I + M+ +P+ T +
Sbjct: 430 VEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+++ SR +A + F E R ++P+ T++S++ Q
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMG-------------VRPNAVTFNSIMLGLCKTRQT 535
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLL 579
+ M GC+ +T + L+
Sbjct: 536 DRAIDFLVYMINRGCKPTETSYTILI 561
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 183/477 (38%), Gaps = 73/477 (15%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T L+ + G+ +A +I + LE PD+ Y+ + + G + + +++RM
Sbjct: 141 TTLIRGFCRMGKTRKAAKILEV-LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ PD+V YN +L + S + K V ++ + P T
Sbjct: 200 ------------------VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + +E + + +M G +TY VLV +EG+++EA+ + +M
Sbjct: 242 YTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
G + + +C+ GRW DA L+ + ++ + P +TF LI G
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR--KGFSPSVVTFNILINFLCRKGL 359
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ I I + M H C+PN + N +L + + +A E E R S G
Sbjct: 360 LGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE---RMVSRG------- 409
Query: 530 GAPLKPDEYTYSSMLEASATAHQWE-------------------YFEYVYKGMALSG--- 567
PD TY++ML A + E + V G+A +G
Sbjct: 410 ---CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 568 -------------CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ D ++ L+ SR GK F G P+ + F ++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIM 526
Query: 615 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES-NEDRISRDKLEKLLNALCN 670
+ ++A+ + M TE +T L E + ++++ LE LLN LCN
Sbjct: 527 LGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALE-LLNELCN 582
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 128/334 (38%), Gaps = 21/334 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD++ ++ + + + + L SG P TY + + ++G+ +
Sbjct: 135 PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M+ S + + TY ++R+ + GK+ +A+ + M QR Y L C
Sbjct: 195 LDRMSVSPDVV---TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+ AM ++++++ R P +T+ L+ G +D+ I M C+PN+
Sbjct: 252 DSGVGQAMKLLDEMRD-RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N +L+ + A++L + R S P T++ ++
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFS-------------PSVVTFNILINFLCRK 357
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ + M GCQ + + LL + K + ++ G P + +
Sbjct: 358 GLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 611 TEMLIQAIVQSNYEKAVALINAMA---YAPFHIT 641
ML E AV ++N ++ +P IT
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 169/393 (43%), Gaps = 37/393 (9%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+K G WR+A+ VL + + DL S + + LGKAG+ AL +F +E
Sbjct: 233 IKACGQARRWREALGVLREMQARGLRPDLVS---FNTAMDALGKAGQYDLALELFT-EIE 288
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
D P++ +Y++ G+ G++ +L+ M Q S R PD V
Sbjct: 289 DHGFAPNLVSYNTAIHACGRAGMVDRAHELLREM-QGLSVR--------------PDSVS 333
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN V+ A +QWK + +++++ G+ P +Y AM V ++G+++ E +
Sbjct: 334 YNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEA 393
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG-R 434
G ++Y ++ A G+ +A+ ME+ GV V + A CN +
Sbjct: 394 LGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVA-PDRVSFNTAMHACNRALK 452
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVN 493
WQ A+ ++ ++++ R P ++T + + G + + + + M+ P N+ T
Sbjct: 453 WQAALQILREMEA-RSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYT 511
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A + R + L EE DG ++P+ +Y+ ++A +W
Sbjct: 512 AAMDACCRGGAVDRVLVLLEEM-------------DGKGVEPNVVSYTIAMDAMNRVGKW 558
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+ V + M G +LD + L A RAG
Sbjct: 559 DRASAVLEQMVQRGLRLDSVSYRTALSTAGRAG 591
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/361 (17%), Positives = 139/361 (38%), Gaps = 41/361 (11%)
Query: 301 MHRKNWD--------PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
M R++W P++E D+V + + AC + +W+ V ++++ GL+P ++
Sbjct: 205 MRRRDWTRALTVLDAPLIEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSF 264
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
AM+ + ++G+YDL E F ++ G A ++Y + A G ++ A +R M+
Sbjct: 265 NTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQG 324
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
V + Y + +W+ A+ ++ ++K P I++ + G +
Sbjct: 325 LSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWE 384
Query: 473 DCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ + + +P++ + N ++ R + +A +LF
Sbjct: 385 RATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVG------------ 432
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK---- 587
+ PD ++++ + A A +W+ + + M + + + RAG+
Sbjct: 433 -VAPDRVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERA 491
Query: 588 ---------------CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
H A D+ G + L E + V+ N ++A
Sbjct: 492 LELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDA 551
Query: 633 M 633
M
Sbjct: 552 M 552
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 106/252 (42%), Gaps = 22/252 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
++ K W+ A+ +L +K+ + + Y + + KAGR A +
Sbjct: 337 VMAAFAKKNQWKAALELL---AEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEA 393
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L L PD+ +Y++V G+ G + + L M + + PD
Sbjct: 394 LGQ-GLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVG---------------VAPDR 437
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V +N ++AC + +W+ + +++ + P+ +Y +A++ ++G+++ E +
Sbjct: 438 VSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEE 497
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN-G 433
M G TY + A G ++ + + M+ +GV V Y +A N G
Sbjct: 498 MEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNV-VSYTIAMDAMNRVG 556
Query: 434 RWQDAMLVVEKI 445
+W A V+E++
Sbjct: 557 KWDRASAVLEQM 568
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G W +A +L G + D+ S Y ++ G+AG +AL +F +M E+ + PD
Sbjct: 381 GRWERATELLTEALGQGLQPDVVS---YNTVMHACGRAGEYLQALDLFGMM-EEVGVAPD 436
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKP-SKRIKNM--------HRKNWDPVLE--- 311
++++ + + ++++ M + + +K+ W+ LE
Sbjct: 437 RVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELME 496
Query: 312 --------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
++ Y A ++AC V + +++ G++P+ +Y +AM+ M + G
Sbjct: 497 EMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVG 556
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLV----RAFWEEGK 399
K+D +M + G + +++Y+ + RA EEG+
Sbjct: 557 KWDRASAVLEQMVQRGLRLDSVSYRTALSTAGRAGDEEGE 596
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 156/383 (40%), Gaps = 18/383 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD +N ++ + + ++ ++G +P TY + + +SG L +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
RKM + TY ++ + +G I+ A++ + ME +G+ + Y L LC
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
G+W D L+++ + S R P ITF L+ + G + + +++ M PNI
Sbjct: 275 KAGKWNDGALLLKDMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N ++ Y + S+A + + R S PD T++S+++
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-------------PDIVTFTSLIKGYCM 380
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + V++ ++ G + ++ L+ ++GK L E F ++ G +P +
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 669
+ +L EKA+ + + + + +T + E K+E N C
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG---MCKGGKVEDAWNLFC 497
Query: 670 NCNAASSEITVSNLSRALHALCR 692
+ + V + + LC+
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCK 520
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 171/407 (42%), Gaps = 34/407 (8%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL V L + D + + L+ L G+ EA+ + + M+E+ PD+ Y+
Sbjct: 142 AYSVLGKVMKLGYEPDTTT---FNTLIKGLFLEGKVSEAVVLVDRMVEN-GCQPDVVTYN 197
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S+ + + G + L+ +M ++ K D+ Y+ ++++
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVK---------------ADVFTYSTIIDSLCRDG 242
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+FK++ G+K S TY + + ++GK++ + M +T+
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
VL+ F +EGK+ EA + M RG+ Y L C R +A +++ +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ S P +TFT LI +DD + +F+++ K N T + +++ + ++
Sbjct: 363 KCS-PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A+ELF+E S G + PD TY +L+ + E +++ + S
Sbjct: 422 AEELFQEMV---SHG----------VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
L + ++ + GK + F SL G P+ + +T M+
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 129/313 (41%), Gaps = 37/313 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR------FVYTKLLAILGKAGRPHEALR 249
L++GL G W +L +D+ SR + LL + K G+ EA
Sbjct: 269 LVRGLCKAGKWNDGALLL---------KDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-RQKPS------------- 295
++ M+ + P+I Y+++ L E +++ M R K S
Sbjct: 320 LYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 296 ---KRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
KR+ + + R L + V Y+ ++ S + K +F+++ G+ P
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TYG+ ++ + +GK + E F + KS +G + Y ++ + GK+ +A +
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ +GV Y + LC G +A +++ K++ + P + T+ LI + + G
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE-DGNAPNDCTYNTLIRAHLRDG 557
Query: 470 HIDDCISIFQHMK 482
+ + + MK
Sbjct: 558 DLTASAKLIEEMK 570
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 22/209 (10%)
Query: 218 GLKDKRDLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
G+K R++ R Y+ L+ ++G+ A +F M+ + PD+ Y +
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH-GVLPDVMTYGILL 445
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
L G L++ +++ E +++ ++ +V+Y ++ + +
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSK---------------MDLGIVMYTTIIEGMCKGGKVE 490
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+ +F L G+KP+ TY + + + + G + RKM + G A TY L+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
RA +G + + + M+ G AS
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADAS 579
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD++ Y +L+ + + + +F+ L+KS + Y +E M + GK +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F + G +TY V++ ++G ++EA +R ME+ G Y L
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 432 NGRWQDAMLVVEKIKSLRHS 451
+G + ++E++KS S
Sbjct: 556 DGDLTASAKLIEEMKSCGFS 575
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 158/379 (41%), Gaps = 38/379 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL L KA + H+A IF+ M+ + + PD+ +Y L+ K+ E
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI---------LIDGFCKIDEL- 498
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R + ++++ D P++ YNA LN + + V++++ +G P
Sbjct: 499 -----GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVI 553
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + K+D HE F M G A+TY L+ +E K +EA R M
Sbjct: 554 TYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 613
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+RG Y L CN G+ + A+ V +++ S H P + + L+ G
Sbjct: 614 VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD-PDVVAYNCLLKGFFRAGK 672
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ +FQ M C+P+ + N M+ S+ A E+FE + +
Sbjct: 673 PGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC-------- 724
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVEASRAGKC 588
PD TY+S++ + V+K + +L HA+ +L+EA + G
Sbjct: 725 ----SPDLVTYNSLIFGLCGEQRLSEAMKVFK--EIDRLKLSPDPHAFNVLLEAIKCGIV 778
Query: 589 HLLE------HAFDSLLEA 601
+ E AF+ L+EA
Sbjct: 779 YQFEIRFKDPPAFNVLMEA 797
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 141/349 (40%), Gaps = 20/349 (5%)
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
++PS+ T ++ + ++G+ D M K G T+ +L+ + KI EA
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ 429
Query: 405 AAVRNMEQR--GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
++ M+++ + Y L LC + A + + S R P ++++ LI
Sbjct: 430 EFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILI 489
Query: 463 ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
+ +++ M D +C PN+ T NA L R + A+ ++EE A S
Sbjct: 490 DGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCS 549
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
PD TYS+++ + A + + +++ M GC+ + + LL
Sbjct: 550 -------------PDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHG 596
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPF 638
+ K F ++E G P + +T +L E+AV + + M + P
Sbjct: 597 LCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 656
Query: 639 HITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 686
+ + F + + ++ + +++ C + S I + LS+A
Sbjct: 657 VVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKA 705
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 159/416 (38%), Gaps = 47/416 (11%)
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
EA+R F M+ D P Y V L G E ++ R +K R
Sbjct: 182 EAVRFFGEMV-DKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEK---------RVA 231
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
+ +L+ L+V + + + + + +F+ + KSG KP A Y + +
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASK------LFRAMVKSGCKPDATIYSYMVLAHCKLENL 285
Query: 366 DLVHEFFRKMAKSGEA-IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
D + F +MA +A + + + + + GKI +A A R M Q + + VY
Sbjct: 286 DEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDM 344
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--K 482
L L +GR A +I R+ +P T +I G +D +S+ + M +
Sbjct: 345 LIRLLIESGRIDKAEEACLEIAG-RNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKR 403
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR------ANSSGYTFLSGDGAPLK-- 534
+C P++ T + ++ + D +A+E + R ++ Y L K
Sbjct: 404 GYC-PDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462
Query: 535 -----------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
PD +YS +++ + E +YK M C + T +
Sbjct: 463 HQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNA 522
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
L R G+ + ++ ++ AG P + ++ ++ + +++A L M
Sbjct: 523 FLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETM 578
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 145/351 (41%), Gaps = 28/351 (7%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F+ L+ K TY ++ +++ + F KM G TY VLV++
Sbjct: 117 FRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCY 176
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
E +EAV M +G ++++Y ++ CL G+ + V + L +E+
Sbjct: 177 ERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFG--RDLEKRVAVEM 234
Query: 457 TF-TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF-- 512
L+++ + + +F+ M K C+P+ + M+ + + + +A +LF
Sbjct: 235 MLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLE 294
Query: 513 ---EETTRANSSGYT-FLSGDGAPLKPDE-YTYSSMLEASATAHQWEYFEYVYKGMALSG 567
E N+ +T FLSG K ++ + ++ S ++ Q Y + + + + SG
Sbjct: 295 MAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVY-DMLIRLLIESG 353
Query: 568 CQLDQTKHAWLLVEASR----AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
++D+ + A L + +G CH L +AG + L E +I+ +
Sbjct: 354 -RIDKAEEACLEIAGRNIQPSSGTCH---SVIQELCKAGRVDSALSLLETMIKRGYCPDM 409
Query: 624 EKAVALINAMAYAPFHITERQWTELFESNEDRI-----SRDKLEKLLNALC 669
LIN + A I E Q E + + +I S LLN+LC
Sbjct: 410 ATHSMLINELCKAD-KIQEAQ--EFLQGMDRKISSRSSSCFSYNSLLNSLC 457
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/555 (19%), Positives = 229/555 (41%), Gaps = 48/555 (8%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL 186
+D +V + +F +W +KR + ++ L+ L E + + W+ ++ M +S
Sbjct: 101 IDVEVHVKIQFF----KWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPC 156
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
++ +++K LG +A+S+ Y +K ++ + Y ++ +L + G +
Sbjct: 157 AIGPSELSEIVKILGRVKMVNKALSIF---YQVKGRKCRPTAGTYNSVILMLMQEGHHEK 213
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHR 303
++N M + + +PD Y ++ G++ V+L + M++ +P+ +I
Sbjct: 214 VHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLM 273
Query: 304 KNW---DPVLEPDLVVYNAVLNACVP--------------SHQWKGVFWVFKQLRKSGLK 346
+ V E +V+ + CVP S + + + V+K + K G K
Sbjct: 274 GIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCK 333
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE-GKINEAVA 405
P + ++ +S + E F +M +TY ++++ +E+ +EA +
Sbjct: 334 PDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASS 393
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M++ GVV ++ Y L C R + A+L++E++ + P + LI S
Sbjct: 394 WLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDE-KGFPPCPAAYCSLINSL 452
Query: 466 MDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ +FQ +K++C ++ M+K + + F++A LF E +
Sbjct: 453 GKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCI--- 509
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
PD Y Y++++ A + +++ M +GC D H +L +R
Sbjct: 510 ----------PDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLAR 559
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
G F + + P + + +L +E+A L+ M F
Sbjct: 560 TGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLIT 619
Query: 645 WTELFES----NEDR 655
++ + E+ +EDR
Sbjct: 620 YSSILEAVGKVDEDR 634
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 161/409 (39%), Gaps = 39/409 (9%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+L+ L + GRP +A R+ C + AY ++ + G L + +++ M
Sbjct: 108 RLVRDLCRRGRPDDAERVVGA----CGPAATVVAYGALTDGYCRAGRLGDARRVVGGM-- 161
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
PV +P+ YN +++ Q + V + G P TY
Sbjct: 162 ---------------PV-QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTY 205
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ +E + Y E M G +TY VL+ EG +++A+ +RN+
Sbjct: 206 NILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPS 265
Query: 413 RGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
G + Y + LC+ RW DA LV E ++ + P E TF +I S G +
Sbjct: 266 HGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLR--ENCPPNEATFNVVIYSLCRKGLL 323
Query: 472 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
I + + M H C NI T NA++ A L ++ S G
Sbjct: 324 QQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLL---SKMKSYG-------- 372
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
KPD TY+++L+ +A QW E + M +GC D L+ + G
Sbjct: 373 --CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVD 430
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 639
F + + G P+ + ++ ++ + ++A+ L N M + F+
Sbjct: 431 AIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFN 479
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 133/321 (41%), Gaps = 23/321 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
L+ L ++G R A+SVLD + D+ Y LL K +A+ + +LM
Sbjct: 173 LIHTLCERGQVRDALSVLDDMLCRGCAPDV---VTYNILLEATCKGRGYRQAMELIDLMR 229
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E C P+ Y+ + + G + + ++L +R PS K P
Sbjct: 230 AEGCT--PNNVTYNVLMDGMCGEGDVDDALEL---LRNLPSHGCK------------PST 272
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN VL + +W + ++ + P+ AT+ + + + + G + K
Sbjct: 273 VNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEK 332
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M+K G +TY ++ E+ ++ A+ + M+ G Y L LC+ +
Sbjct: 333 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQ 392
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
W DA +++ + P +TF LI G + D I +F+ M D C PN T +
Sbjct: 393 WVDAEELMDNMTQ-NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 451
Query: 494 AMLKVYSRNDMFSKAKELFEE 514
++ ++ +A ELF E
Sbjct: 452 TIISGLAKATKLDQALELFNE 472
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 156/401 (38%), Gaps = 86/401 (21%)
Query: 122 KDLNWVLDDDVQLGS--DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVR 179
+D VLDD + G D N+ + R +A+ L+D + T N +
Sbjct: 184 RDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME-LIDLMRAEGCTPNNVTYNV 242
Query: 180 IMNQSGLMFTEGQM---LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
+M+ M EG + L+LL+ L G S Y +L
Sbjct: 243 LMDG---MCGEGDVDDALELLRNLPSHGCK-------------------PSTVNYNTVLK 280
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS- 295
L A R +A + ML + N P+ A ++ V +L + GLL++ ++L+E+M +
Sbjct: 281 GLCSAERWGDADELVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 339
Query: 296 ------KRIKN--MHRKNWDPVL-----------EPDLVVYNAVLNACVPSHQW------ 330
I N ++N D + +PD+V YN +L + QW
Sbjct: 340 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEEL 399
Query: 331 -------------------------KGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQ 361
KG+ VFKQ+ G P++ TY + + +
Sbjct: 400 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 459
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+ K D E F +M G + Y++L ++ I EA+ VR ++ G+ +
Sbjct: 460 ATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVL 518
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
Y + LC NG+ + A+ ++ + S P ++T+ LI
Sbjct: 519 YNAILLGLCRNGKTEFAIDIMAYMVS-SGCMPDDLTYVILI 558
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 20/208 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL W A ++D + L + L+ L + G +A+ +F M
Sbjct: 383 LLKGLCSAAQWVDAEELMD---NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM- 438
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P+ Y ++ L + L + ++L M K PD
Sbjct: 439 PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK---------------GFNPD-K 482
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+Y + + ++L+ SG+ P Y + + ++GK + + M
Sbjct: 483 IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 542
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEA 403
SG LTY +L+ EG +NEA
Sbjct: 543 VSSGCMPDDLTYVILIEGLAYEGYLNEA 570
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 141/320 (44%), Gaps = 15/320 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD V +N +++ ++ + Q+ + G +P TYG + + + G DL
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+KM K + Y ++ + I++A A ME +G+ Y L CLC
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
N GRW DA ++ + R P +TF+ LI + + G + + ++ M K +P+I
Sbjct: 302 NYGRWSDASRLLSNMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++++ + +D +AK +FE +S D P+ TY+++++
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFE----------LMISKDCF---PNVVTYNTLIKGFCK 407
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A + E +++ M+ G + + L+ +AG C + + F ++ G P +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 610 FTEMLIQAIVQSNYEKAVAL 629
++ +L EKA+ +
Sbjct: 468 YSILLDGLCKYGKLEKALVV 487
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y+ L+ R EA +F LM+ +DC +P++ Y+++ + ++E ++L
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 288 ERMRQK--------------------PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
M Q+ + + +K + PD++ Y+ +L+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + VF+ L+KS ++P TY + +E M ++GK + + F ++ G + Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
++ F +G EA A R M++ G + + Y L
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTL 576
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +AG A +IF M+ D + PDI Y + L + G L++ + + E +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EPD+ YN ++ + + + + +F L G+KP+
Sbjct: 492 QKSK---------------MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + + G + FR+M + G + Y L+RA +G + ++ M
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAML 440
G VG AS + + ++GR + + L
Sbjct: 597 RSCGFVGDAST-ISMVINMLHDGRLEKSYL 625
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 169/436 (38%), Gaps = 38/436 (8%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
L+ L +G +A+ + D + R+ L+ L GR +A R+F +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMAS-GGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGP 215
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
+ Y+++ + G +++ +LI M PD
Sbjct: 216 SAT----VVTYNTMVNGYCRAGRIEDARRLINGMP------------------FPPDTFT 253
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+N ++ A + VF + G PS TY + ++ + Y +M
Sbjct: 254 FNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMR 313
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G +TY VL+ A EG ++EA+ + N+ G A Y + LC + RW+
Sbjct: 314 AKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWK 373
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 495
+ ++ ++ S + P E+TF ++ S G +D I + HM +H C +I T +++
Sbjct: 374 EVEELLAEMTS-NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSI 432
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
L A EL +R S G KPD Y+++L+ + QWE
Sbjct: 433 LDGLCDVGRVDDAVELL---SRLKSYG----------CKPDTIAYTTVLKGLCSTEQWER 479
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
E + M S C D+ ++ + G + + E G P + + ++
Sbjct: 480 AEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIID 539
Query: 616 QAIVQSNYEKAVALIN 631
+S + A+ L++
Sbjct: 540 GLCNESCIDDAMELLS 555
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 180/431 (41%), Gaps = 46/431 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + L+ L GR +AL +F+ ML P + Y + + ++ + L++
Sbjct: 252 FTFNPLIRALCVRGRIPDALAVFDDMLHR-GCSPSVVTYSILLDATCKESGYRQAMALLD 310
Query: 289 RMRQK---PSKRIKNM------HRKNWDPVL-----------EPDLVVYNAVLNACVPSH 328
MR K P N+ + + D L +PD V Y VL + S
Sbjct: 311 EMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSE 370
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+WK V + ++ + P T+ + + Q G D E M++ G +TY
Sbjct: 371 RWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYS 430
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKS 447
++ + G++++AV + ++ G Y + LC+ +W+ A L+ E + S
Sbjct: 431 SILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCS 490
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
P E+TF ++ S G +D I + + M ++ C P+I T N ++
Sbjct: 491 --DCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCID 548
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
A EL + S G KPD T++++L+ +WE E + M S
Sbjct: 549 DAMELLSDL---QSCG----------CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRS 595
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLFFTEMLIQAIVQSN- 622
C D+ ++ + G LL A ++L E G +P+ ++ +++ A++++
Sbjct: 596 NCPPDELTFNTVITSLCQKG---LLTQAIETLKIMAENGCVPNSSTYS-IVVDALLKAGK 651
Query: 623 YEKAVALINAM 633
+ A+ L++ M
Sbjct: 652 AQAALELLSGM 662
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 161/416 (38%), Gaps = 53/416 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--Y 217
+V L ++ + + + V M++ G + +L GL D G A+ +L + Y
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQ 276
G K YT +L L + A + ML DC PD +++V +L Q
Sbjct: 456 GCK-----PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCP--PDEVTFNTVVASLCQ 508
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
GL+ ++++E+M + PD+V YN +++ +
Sbjct: 509 KGLVDRAIRVVEQMSENGCS---------------PDIVTYNCIIDGLCNESCIDDAMEL 553
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
L+ G KP T+ ++ + +++ + M +S LT+ ++ + +
Sbjct: 554 LSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQ 613
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
+G + +A+ ++ M + G V +S Y + L G+ Q A+ E + + + P I
Sbjct: 614 KGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAAL---ELLSGMTNGTPDLI 670
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+ +I + G +++ + + + M + C P+ T ++ R D +A +
Sbjct: 671 TYNTVISNLTKAGKMEEALDLLRVMVSNGLC-PDTTTYRSLAYGVCREDGTDRAVRMLRR 729
Query: 515 TTRANSSGYTFLSGD----------------------GAPLKPDEYTYSSMLEASA 548
S T D + PDE TY +LEA A
Sbjct: 730 VQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALA 785
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 116/299 (38%), Gaps = 47/299 (15%)
Query: 368 VHEFFRKMAKSGEAIGALTYKV--------------------------------LVRAFW 395
V + R A G + +TY L+RA
Sbjct: 203 VSDAERVFAALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALC 262
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G+I +A+A +M RG + Y L C ++ AM +++++++ + +P
Sbjct: 263 VRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRA-KGCEPDI 321
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+ LI + + G +D+ ++I ++ H C+P+ T +LK ++ + + +EL E
Sbjct: 322 VTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAE 381
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
T N + PDE T+++++ + + V M+ GC D
Sbjct: 382 MTSNNCA-------------PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ +L G+ L G P + +T +L +E+A L+ M
Sbjct: 429 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEM 487
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 106/279 (37%), Gaps = 23/279 (8%)
Query: 359 MLQSGKYDLVHEFFRKMAKSG--EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
++Q G+ D F MA G + +L++ +G++++A R G
Sbjct: 160 LVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAE---RVFAALGPS 216
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
T Y + C GR +DA ++ + P TF LI + G I D ++
Sbjct: 217 ATVVTYNTMVNGYCRAGRIEDARRLINGMPF----PPDTFTFNPLIRALCVRGRIPDALA 272
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+F M C P++ T + +L + + +A L +E RA +P
Sbjct: 273 VFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEM-RAKGC------------EP 319
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
D TY+ ++ A + + + GC+ D + +L + + +E
Sbjct: 320 DIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELL 379
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ P + F ++ Q ++A+ +++ M+
Sbjct: 380 AEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMS 418
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 125/309 (40%), Gaps = 26/309 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+V L ++ + + + V M+++G ++ GL ++ AM +L +
Sbjct: 501 TVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSC 560
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVG 278
K D+ + LL L R +A ++ N+M +C PD +++V +L Q G
Sbjct: 561 GCKPDI---VTFNTLLKGLCGVDRWEDAEQLMANMMRSNCP--PDELTFNTVITSLCQKG 615
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE------------------PDLVVYNAV 320
LL + ++ ++ M + + + D +L+ PDL+ YN V
Sbjct: 616 LLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTV 675
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-GLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ + + + + + + +GL P TY LA V + G D R++ +G
Sbjct: 676 ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGT-DRAVRMLRRVQDTG 734
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ Y ++ F + + + A+ +M G + S Y L L G +A
Sbjct: 735 LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAK 794
Query: 440 LVVEKIKSL 448
++ + SL
Sbjct: 795 RLLASLCSL 803
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 164/386 (42%), Gaps = 36/386 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
+L+ L D G +QAM VLD + +RD + YT L+ + A+++ + M
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRML----QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
D PD+ Y+ + + + G L E +K + M PS +P++
Sbjct: 266 -RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM---PSSGC------------QPNV 309
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ +N +L + + +W + + + G PS T+ + + + + G + K
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G +L+Y L+ F +E K++ A+ + M RG Y + LC +G+
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVN 493
+DA+ ++ ++ S + P+ IT+ +I G I + M+ +P+ T +
Sbjct: 430 VEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+++ SR +A + F E R ++P+ T++S++ + Q
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMG-------------IRPNAVTFNSIMLGLCKSRQT 535
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLL 579
+ M GC+ ++T + L+
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILI 561
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 182/477 (38%), Gaps = 73/477 (15%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T L+ + G+ +A +I + LE PD+ Y+ + + G + + +++RM
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEI-LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ PD+V YN +L + S + K V ++ + P T
Sbjct: 200 ------------------VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + +E + + +M G +TY VLV +EG+++EA+ + +M
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
G + + +C+ GRW DA L+ + ++ + P +TF LI G
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR--KGFSPSVVTFNILINFLCRKGL 359
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ I I + M H C+PN + N +L + + +A E E R S G
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE---RMVSRG------- 409
Query: 530 GAPLKPDEYTYSSMLEASATAHQWE-------------------YFEYVYKGMALSG--- 567
PD TY++ML A + E + V G+A +G
Sbjct: 410 ---CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 568 -------------CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ D ++ L+ SR GK F G P+ + F ++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 615 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES-NEDRISRDKLEKLLNALCN 670
+ ++A+ + M E +T L E + ++++ LE LLN LCN
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE-LLNELCN 582
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 156/383 (40%), Gaps = 18/383 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD +N ++ + + ++ ++G +P TY + + +SG L +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
RKM + TY ++ + +G I+ A++ + ME +G+ + Y L LC
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
G+W D L+++ + S R P ITF L+ + G + + +++ M PNI
Sbjct: 275 KAGKWNDGALLLKDMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N ++ Y + S+A + + R S PD T++S+++
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-------------PDIVTFTSLIKGYCM 380
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + V++ ++ G + ++ L+ ++GK L E F ++ G +P +
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 669
+ +L EKA+ + + + + +T + E K+E N C
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG---MCKGGKVEDAWNLFC 497
Query: 670 NCNAASSEITVSNLSRALHALCR 692
+ + V + + LC+
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCK 520
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 171/407 (42%), Gaps = 34/407 (8%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL V L + D + + L+ L G+ EA+ + + M+E+ PD+ Y+
Sbjct: 142 AYSVLGKVMKLGYEPDTTT---FNTLIKGLFLEGKVSEAVVLVDRMVEN-GCQPDVVTYN 197
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S+ + + G + L+ +M ++ K D+ Y+ ++++
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVK---------------ADVFTYSTIIDSLCRDG 242
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+FK++ G+K S TY + + ++GK++ + M +T+
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
VL+ F +EGK+ EA + M RG+ Y L C R +A +++ +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ S P +TFT LI +DD + +F+++ K N T + +++ + ++
Sbjct: 363 KCS-PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A+ELF+E S G + PD TY +L+ + E +++ + S
Sbjct: 422 AEELFQEMV---SHG----------VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
L + ++ + GK + F SL G P+ + +T M+
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 129/313 (41%), Gaps = 37/313 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR------FVYTKLLAILGKAGRPHEALR 249
L++GL G W +L +D+ SR + LL + K G+ EA
Sbjct: 269 LVRGLCKAGKWNDGALLL---------KDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-RQKPS------------- 295
++ M+ + P+I Y+++ L E +++ M R K S
Sbjct: 320 LYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 296 ---KRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
KR+ + + R L + V Y+ ++ S + K +F+++ G+ P
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TYG+ ++ + +GK + E F + KS +G + Y ++ + GK+ +A +
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ +GV Y + LC G +A +++ K++ + P + T+ LI + + G
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE-DGNAPNDCTYNTLIRAHLRDG 557
Query: 470 HIDDCISIFQHMK 482
+ + + MK
Sbjct: 558 DLTASAKLIEEMK 570
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD++ Y +L+ + + + +F+ L+KS + Y +E M + GK +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F + G +TY V++ ++G ++EA +R ME+ G Y L
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 432 NGRWQDAMLVVEKIKSLRHS 451
+G + ++E++KS S
Sbjct: 556 DGDLTASAKLIEEMKSCGFS 575
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 162/353 (45%), Gaps = 35/353 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ LG G A +V D LK+ K+ + ++ L++ G++G +EA+++F+ M
Sbjct: 196 MISTLGRLGKVELAKAVFD--TALKEGYG-KTVYAFSALISAYGRSGYCNEAIKVFDSMK 252
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ L P++ Y++V G+ G+ K++V++ + M ++PD
Sbjct: 253 SN-GLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNG---------------VQPDR 296
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ +N++L C W+ +F + G+ TY ++ + + G+ DL E +
Sbjct: 297 ITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSE 356
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M +TY ++ + + G++++A+ M+ GV Y L GR
Sbjct: 357 MPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGR 416
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVN 493
++ A+ V +++++ K + +T+ L+ D+ +F+ MK PN+ T +
Sbjct: 417 FEQALDVCKEMENAGIRKDV-VTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYS 475
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
++ VYS+ ++ +A E+F E +A LK D YS++++A
Sbjct: 476 TLIDVYSKGGLYKEAMEVFREFKQAG-------------LKADVVLYSALIDA 515
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 155/397 (39%), Gaps = 47/397 (11%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G W A + + DK + F Y LL + K G+ A I + M N+ P+
Sbjct: 310 GLWEAARRLFS---AMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTK-NILPN 365
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y ++ +VG L + + + M+ + D V YN +L+
Sbjct: 366 VVTYSTMIDGYAKVGRLDDALNMFNEMKFLG---------------VGLDRVSYNTLLSV 410
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
+++ V K++ +G++ TY + + +YD V F +M + +
Sbjct: 411 YAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPN 470
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
LTY L+ + + G EA+ R +Q G+ +Y L LC NG + ++ +++
Sbjct: 471 LLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLD 530
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRND 503
++ +P +T+ II + C+ + D E V ++ + +
Sbjct: 531 EMTK-EGIRPNVVTYNS-IIDAFGRSASAQCV-----VDDSGETTALQVESLSSIVVQEA 583
Query: 504 MFSKAK--------ELF-----EETTRANSSGY--------TFLSGDGAPLKPDEYTYSS 542
+ S+A E+F E+ A +SG F +KP+ T+S+
Sbjct: 584 IESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMHELKIKPNVVTFSA 643
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+L A + +E + + + L Q+ H L+
Sbjct: 644 ILNACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLM 680
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 98/263 (37%), Gaps = 21/263 (7%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F R+SG + + + GK +L F K G + L+ A+
Sbjct: 178 FAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGR 237
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPL 454
G NEA+ +M+ G++ V Y C G + VVE + + +P
Sbjct: 238 SGYCNEAIKVFDSMKSNGLMPNL-VTYNAVIDACGKGGVEFKK-VVEIFDGMLSNGVQPD 295
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
ITF L+ GG + +F M D + +I T N +L + A E+
Sbjct: 296 RITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMS 355
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
E N + P+ TYS+M++ A + + ++ M G LD+
Sbjct: 356 EMPTKN-------------ILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRV 402
Query: 574 KHAWLLVEASRAGKCHLLEHAFD 596
+ LL ++ G+ E A D
Sbjct: 403 SYNTLLSVYAKLGR---FEQALD 422
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 138/320 (43%), Gaps = 33/320 (10%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + QA+ V + ++D+ Y LLA GK R E R+F M + + P+
Sbjct: 415 GRFEQALDVCKEMENAGIRKDV---VTYNALLAGYGKQYRYDEVRRVFEEM-KRGRVSPN 470
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y ++ + GL KE +++ +Q L+ D+V+Y+A+++A
Sbjct: 471 LLTYSTLIDVYSKGGLYKEAMEVFREFKQAG---------------LKADVVLYSALIDA 515
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
+ + + ++ K G++P+ TY ++ +S V + SGE
Sbjct: 516 LCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCV------VDDSGETT- 568
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML--V 441
AL + L +E ++A N R + + E AC N+G+ + + V
Sbjct: 569 ALQVESLSSIVVQEAIESQAADKEDN---RIIEIFGKLAAEKACEAKNSGKQEILCILGV 625
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSR 501
+K+ L+ KP +TF+ ++ + +D + + ++ G + +L Y R
Sbjct: 626 FQKMHELK-IKPNVVTFSAILNACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLMGY-R 683
Query: 502 NDMFSKAKELFEETTRANSS 521
+++ +A+ LF+E +SS
Sbjct: 684 ENVWLQAQSLFDEVKLMDSS 703
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 15/180 (8%)
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM-FSKAKELFEET 515
F+ LI + G+ ++ I +F MK + PN+ T NA++ + + F K E+F+
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
S+G ++PD T++S+L + WE ++ M G D +
Sbjct: 288 L---SNG----------VQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTY 334
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
LL + G+ L + +P+ + ++ M+ + A+ + N M +
Sbjct: 335 NTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKF 394
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 206/497 (41%), Gaps = 80/497 (16%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
QAM L+++ L + +++ L+ L K G P +A+++F M E + P+I Y
Sbjct: 77 QAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM-ESSRVKPEIVTY 135
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++V L + G L++ +L+E M +K K PD+V YN ++NA
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKS-------------APDIVTYNTLINA---- 178
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
F+ R S ++ + A F KM +G LT
Sbjct: 179 ------FY-----RASRIREACA--------------------FREKMKAAGINPDVLTC 207
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+LV ++G + EA+ + M+ G V Y + LC G+ +A E +K+
Sbjct: 208 NILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA---AEILKT 264
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 506
+ S L +TF L+ G + + + + M +++ P++ T ++ R
Sbjct: 265 MSCSPDL-VTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQ 323
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
A L EE R GY PD Y+S+++ + + E + K M++
Sbjct: 324 VAFYLLEEIVR---QGYI----------PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEK 625
GC+ ++ L+ RAG H ++ +P PLF +++ +++ + K
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVP-PLFTYNIVLGGLIKDGSISK 429
Query: 626 AVALIN---AMAYAPFHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVS 681
AV+LI+ A Y P +T + L ++N R + D +++ + C N +
Sbjct: 430 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVT------ 483
Query: 682 NLSRALHALCRSEKERD 698
L + LCR + D
Sbjct: 484 -LGSVVFGLCRVGRVDD 499
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/398 (19%), Positives = 147/398 (36%), Gaps = 49/398 (12%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L++ + K G EAL I + M + PD+ Y+S+ L G + E ++++ M
Sbjct: 210 LVSGICKDGDVEEALEILDGM-KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS-- 266
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
PDLV +N +L+ + V +++ + + P TY
Sbjct: 267 ----------------CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + + + G+ + ++ + G + Y LV + G+I EA V+ M R
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL---EITFTGLIISSMDGGH 470
G +Y L C G A ++ ++ S+ PL I GLI G
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLI----KDGS 426
Query: 471 IDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEE--------------- 514
I +S+ + P++ T N ++ + + +A +L +E
Sbjct: 427 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGS 486
Query: 515 -------TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
R + + + P+ Y+S+++ + + + V M G
Sbjct: 487 VVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG 546
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
LD + L+V S G+ +D ++ G +P
Sbjct: 547 VALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLP 584
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 126/324 (38%), Gaps = 34/324 (10%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+ YN +L+ V S V+K L SG P+ T+ + + ++G+ EF
Sbjct: 26 DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R + + A + VL+ +++G ++AV NME V Y + LC +
Sbjct: 86 RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145
Query: 433 GRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 490
G + A L+ E I+ S P +T+ LI + I + + + MK P++
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N ++ ++ +A E+ + A P+ PD TY+S++ A A
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGMKLA------------GPV-PDVITYNSIIHALCVA 252
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ + K M+ C D LL D +AG +P L
Sbjct: 253 GKVVEAAEILKTMS---CSPDLVTFNTLL----------------DGFCKAGMLPRALEV 293
Query: 611 TEMLIQAIVQSNYEKAVALINAMA 634
E + + + + L+N +
Sbjct: 294 LEEMCRENILPDVITYTILVNGLC 317
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 137/352 (38%), Gaps = 54/352 (15%)
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
+ G K +Y ++++++SG + + ++ + SG + +T+K+L+R + G+
Sbjct: 20 QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
A+ +R +++ V ++ L +G ++D
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNVLI-----HGLFKD------------------------ 110
Query: 462 IISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
G+ D + +F++M+ +P I T N ++ ++ KA+EL EE R
Sbjct: 111 -------GNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIR--- 160
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
G PD TY++++ A A + + M +G D L+
Sbjct: 161 --------KGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVS 212
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 640
+ G D + AG +P + + ++ V +A ++ M+ +P +
Sbjct: 213 GICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLV 272
Query: 641 TERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
T + F + R LE +L +C N IT + L ++ LCR
Sbjct: 273 TFNTLLDGF-CKAGMLPR-ALE-VLEEMCRENILPDVITYTIL---VNGLCR 318
>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 564
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 168/394 (42%), Gaps = 53/394 (13%)
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
++++ LK G KG W++A++ + ++ + + Y+ L++ + ++GR E L +
Sbjct: 36 KLIQTLKSQGRKGQWKEALTAANLA---REDGVVFDVYTYSVLMSAVARSGRWEEVLVLL 92
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM---------- 301
++M + + PD A+ + + G + V L++ Q+ + + M
Sbjct: 93 DVMRSE-GVAPDHFAFGAAVNACAKGGQWERAVALLD---QRALRLLGEMAAVGLSPNVT 148
Query: 302 ----------HRKNWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ W+ L P+ ++A ++AC + QW+ + +++
Sbjct: 149 TFSSAVAACGNAGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRM 208
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R + P+ TY A++ ++G++ L +M + G A +T+ + A G+
Sbjct: 209 RAANCPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQW 268
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
EA+ +R+M GV Y +N RW A+ V E+++S R + E++FT
Sbjct: 269 QEALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRS-RGIRGDEVSFTA 327
Query: 461 LIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
I + GG + +++ M+D P + + + + + + +A L E
Sbjct: 328 AIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVG 387
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
S P+E ++++ ++A A QW
Sbjct: 388 VS-------------PNEVSFNAAIDACGRAGQW 408
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 156/365 (42%), Gaps = 36/365 (9%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+ G+ G W +A+ +LD + ++ + F ++ ++ GKAG+ AL I M
Sbjct: 154 VAACGNAGQWERALGLLD---QMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRM-R 209
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
N P++ Y + G+ G + L+ MR+K + P+++
Sbjct: 210 AANCPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKG---------------VAPNVIT 254
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD---LVHEFFR 373
+N+ ++A QW+ + + + G++P+ +Y A+ + ++ VHE R
Sbjct: 255 FNSAISALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMR 314
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
G+ + ++ + A + G A+A + M G+ T + A C G
Sbjct: 315 SRGIRGDEV---SFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVR-SFSTAISACGKG 370
Query: 434 R-WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV 492
+ W A+ ++ +++ + S P E++F I + G +S+ M P GT+
Sbjct: 371 QQWGRAVALLREMEEVGVS-PNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPR-GTI 428
Query: 493 --NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK-PDEYTYSSMLEASAT 549
NA++ + +++A + E +G GD AP+ D +YS+ ++A
Sbjct: 429 TYNAVIAACGKGKEWARAVSVLREML----AGQAKTDGDMAPVPMADVVSYSAAIDACVR 484
Query: 550 AHQWE 554
A +WE
Sbjct: 485 AGEWE 489
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 132/336 (39%), Gaps = 32/336 (9%)
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
QWK R+ G+ TY + M + +SG+++ V M G A +
Sbjct: 49 QWKEALTAANLAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRSEGVAPDHFAFG 108
Query: 389 VLVRAFWEEGKINEAVA-----AVRNMEQRGVVGTAS--VYYELACCLCNN-GRWQDAML 440
V A + G+ AVA A+R + + VG + + A C N G+W+ A+
Sbjct: 109 AAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAACGNAGQWERALG 168
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVY 499
+++++ P E TF+ + + G ++I + M+ +C PN+ T A +
Sbjct: 169 LLDQMAE-EGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDAC 227
Query: 500 SRNDMFSKAKELFEETTRANSSG--YTFLS-----GDGA---------------PLKPDE 537
+ + A+ L E + TF S G+G ++P+
Sbjct: 228 GKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPSMGVQPNM 287
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
++Y++ + A ++W V++ M G + D+ + ++ G + D
Sbjct: 288 WSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLDE 347
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ + G P F+ + + +AVAL+ M
Sbjct: 348 MRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREM 383
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 114/281 (40%), Gaps = 44/281 (15%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV------YTKLLAILGKAGRPHEALRI 250
+ LG+ G W++A+++L RD+ S V YT + G R AL +
Sbjct: 259 ISALGNGGQWQEALNLL---------RDMPSMGVQPNMWSYTAAVTACGDNNRWARALAV 309
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
M + D ++ + Q G + + L++ MR D +
Sbjct: 310 HEQMRSR-GIRGDEVSFTAAIDACAQGGAWEMALALLDEMR---------------DEGI 353
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P + ++ ++AC QW + +++ + G+ P+ ++ A++ ++G++
Sbjct: 354 PPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALS 413
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM---------EQRGVVGTASV 421
KM+ +G G +TY ++ A + + AV+ +R M + V V
Sbjct: 414 LLDKMSSAGVPRGTITYNAVIAACGKGKEWARAVSVLREMLAGQAKTDGDMAPVPMADVV 473
Query: 422 YYELACCLC-NNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
Y A C G W++A+ +VE LR + L + G+
Sbjct: 474 SYSAAIDACVRAGEWEEAISLVEL---LRRDRRLNVGTEGV 511
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 100/246 (40%), Gaps = 23/246 (9%)
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
+G+ EA+ A + GVV Y L + +GRW++ +++++ ++S P
Sbjct: 47 KGQWKEALTAANLAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRS-EGVAPDHF 105
Query: 457 TFTGLIISSMDGGHIDDCISIF---------QHMKDHCEPNIGTVNAMLKVYSRNDMFSK 507
F + + GG + +++ + PN+ T ++ + + +
Sbjct: 106 AFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAACGNAGQWER 165
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A L ++ ++ +G P P+E+T+S+ + A A QW + + M +
Sbjct: 166 ALGLLDQ-----------MAEEGVP--PNEFTFSAAVSACGKAGQWRPALTILRRMRAAN 212
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
C + + + +AG+ L + + E G P+ + F + +++A+
Sbjct: 213 CPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEAL 272
Query: 628 ALINAM 633
L+ M
Sbjct: 273 NLLRDM 278
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 158/388 (40%), Gaps = 22/388 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD+ YNA+++ ++Q VF ++R G P TY + + + GK +L E
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
++ K G +TY +L+ A EG+INEA+ + RG+ Y + +C
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNI 489
G A+ V + S R P +++ L+ S ++ +D + + M CEPN+
Sbjct: 248 KEGMEDRALDFVRHL-SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T + ++ + R +A + E L PD Y+Y ++ A
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKG-------------LTPDSYSYDPLISAFCK 353
Query: 550 AHQWEY-FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + EY+ K M GC D + +L + G L F+ L E G P
Sbjct: 354 EGRLDLAIEYLEK-MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVR 412
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL-EKLLNA 667
+ M N KA+ +I+ M E + L + RD L ++ +
Sbjct: 413 AYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISC----LCRDGLVDEAIGL 468
Query: 668 LCNCNAASSEITVSNLSRALHALCRSEK 695
L + A + TV + + L +C++ +
Sbjct: 469 LVDMEATRFQPTVISFNIVLLGMCKAHR 496
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 160/377 (42%), Gaps = 48/377 (12%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
KL+KG + + ++AM V++ + YG D + Y +++ KA + A ++F+
Sbjct: 102 KLIKGFFNSRNLKKAMRVMEILETYGDPDV------YSYNAMISGFSKANQIDSANQVFD 155
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS-------------- 295
M PD+ Y+ + +L G L+ ++++ + + KPS
Sbjct: 156 RMRSR-GFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILE 214
Query: 296 KRIKNMHRKNWDPV----LEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RI N + +D + L PDL YNA++ C + + + +V + L G P
Sbjct: 215 GRI-NEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFV-RHLSARGCNPDVV 272
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+Y + + L +++ + M SG +T+ +L+ +F EG++ EAV + M
Sbjct: 273 SYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVM 332
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+++G+ + Y L C GR A+ +EK+ S P + + ++ + G
Sbjct: 333 KEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS-DGCLPDIVNYNTILATLCKFGC 391
Query: 471 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
D + +F+ + + C P + N M KA E+ E R
Sbjct: 392 ADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKG---------- 441
Query: 530 GAPLKPDEYTYSSMLEA 546
+ PDE TY+S++
Sbjct: 442 ---IDPDEITYNSLISC 455
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 111/261 (42%), Gaps = 20/261 (7%)
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
C G+ +++ +E + S + KP + T LI + ++ + + + ++ + +P++
Sbjct: 73 CRAGKHNESLYFLESVVS-KGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDV 131
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+ NAM+ +S+ + A ++F+ R S G++ PD TY+ M+ + +
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFD---RMRSRGFS----------PDVVTYNIMIGSLCS 178
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ E V + GC+ + L+ G+ + FD L+ G P L+
Sbjct: 179 RGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPD-LY 237
Query: 610 FTEMLIQAIVQSNYE-KAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
+I+ I + E +A+ + ++ + + L S ++ + E+L+ +
Sbjct: 238 TYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDM 297
Query: 669 ----CNCNAASSEITVSNLSR 685
C N + I +S+ R
Sbjct: 298 VLSGCEPNVVTHSILISSFCR 318
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/479 (21%), Positives = 194/479 (40%), Gaps = 68/479 (14%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M+ G E + L G WR+A+S+L+ + + +YTK+++ L +
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLE------KEEFVPDTVLYTKMISGLCE 54
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
A EA+ M L P++ Y + L + + + KRI +
Sbjct: 55 ASLFEEAMDFLTRMRASSCL-PNVLTYRIL------------LCGCLNKEKLGRCKRILS 101
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
M P ++N++++A S + + + K++ + G +P Y + + +
Sbjct: 102 MMITEG---CYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGIC 158
Query: 361 QS---GK--YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
S GK DL + + +M ++G + + R GK +A +R M +G
Sbjct: 159 SSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGF 218
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ S Y ++ LCN + + A + +++K P +T LI S G I+
Sbjct: 219 IPDTSTYSKVIGYLCNASKVEKAFQLFQEMKR-NGIAPDVYVYTTLIDSFCKAGFIEQAR 277
Query: 476 SIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYT------ 524
+ F M +D C PN+ T A++ Y ++ SKA E++E + N YT
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337
Query: 525 -----------------------------FLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
F DGA +P+ +TY ++++ A+Q +
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ K M++ GC+ + + L+ +AGK + F ++LE G P+ ++ ++
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLI 456
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 132/291 (45%), Gaps = 13/291 (4%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K+ + +A ++ +ML P+I Y ++ L + G +++ + I ++
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMMLSK-GCTPNIVTYTALIDGLCKAGKIEKASQ-IYKI 352
Query: 291 RQKPSKRIKN--MHRKNWDPVL-EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+K + I + MH + D EP++ Y A+++ ++Q K + K + G +P
Sbjct: 353 MKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEP 412
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ Y ++ ++GK D E F M + G TY L+ +++ +++ A+ +
Sbjct: 413 NHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVL 472
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDA---MLVVEKIKSLRHSKPLEITFTGLIIS 464
M + +Y E+ LC G+ +A M+++E+ + P +T+T +I
Sbjct: 473 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE----KGCNPNVVTYTAMIDG 528
Query: 465 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G ++ C+ + Q M C PN T ++ + +A +L EE
Sbjct: 529 FGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEE 579
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 115/266 (43%), Gaps = 30/266 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQM-LKLLKGLGDKGSWRQAMSVLDWV--- 216
L+D L + K + +IM + + + M +++ G ++ + +++D +
Sbjct: 333 LIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKA 392
Query: 217 YGLKDKRDL----------KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
Y +K+ RDL + VY L+ KAG+ EA +F MLE C P++
Sbjct: 393 YQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLE-CGYDPNVYT 451
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ L + L +K++ +M + P++V+Y +++
Sbjct: 452 YSSLIDRLFKDKRLDLALKVLSKMLENSCA---------------PNVVIYTEMIDGLCK 496
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + + + + G P+ TY ++ +SG+ + E ++M+ G A +T
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQ 412
Y+VL+ G ++EA + M+Q
Sbjct: 557 YRVLINHCCSTGLLDEAHKLLEEMKQ 582
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/219 (18%), Positives = 90/219 (41%), Gaps = 18/219 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y L+ L KA + EA + M +E C P+ Y ++ + G L E ++
Sbjct: 380 FTYGALVDGLCKAYQVKEARDLLKSMSVEGCE--PNHVVYDALIDGCCKAGKLDEAQEVF 437
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
M + +DP ++ Y+++++ + V ++ ++ P
Sbjct: 438 TTMLEC-----------GYDP----NVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAP 482
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ Y ++ + + GK D ++ M + G +TY ++ F + G++ + + +
Sbjct: 483 NVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELL 542
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
+ M +G Y L C+ G +A ++E++K
Sbjct: 543 QQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMK 581
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 188/418 (44%), Gaps = 46/418 (11%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D++SR TKL+ L + GRP EA IFN ++E+ + P I Y ++ L + L
Sbjct: 318 DVRSR---TKLMNGLIERGRPQEAHSIFNTLIEEGH-KPSIITYTTLVTALTRQKHFHSL 373
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ LI ++++ L PD +++NA++NA S +F+++++S
Sbjct: 374 LSLISKVQKNG---------------LRPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI--GALTYKVLVRAFWEEGKIN 401
G KP+A+T+ ++ + GK + M + E + T +LV+A+ + KI
Sbjct: 419 GCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRD-EMLQPNDRTCNILVQAWCNQRKIE 477
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFT 459
EA V M+ GV A + LA G A ++ I + H+K P T
Sbjct: 478 EAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMI--IPRMLHNKVKPNVRTCG 535
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY-SRNDM--FSKAKELFEET 515
++ + G +++ + F MK+ PN+ N+++K + + NDM + +L EE
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 595
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+KPD T+S+++ A ++ + E +Y+ M G D
Sbjct: 596 G----------------VKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAF 639
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ L +RAG+ E + + + G P+ + +T+++ +KA+ + N M
Sbjct: 640 SILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKM 697
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P+L V+N+++ + + GV V + + G+KP T+ M G
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E +R M + G + +L + + G+ +A + M + GV +Y ++
Sbjct: 622 EIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
C+ G + AM V K++ P T+ LI
Sbjct: 682 CSAGEMKKAMQVYNKMRGSVGLSPNLTTYETLI 714
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPS--- 295
G+ EALR F M E ++P++ ++S+ + + + + E+V L+E KP
Sbjct: 545 GKMEEALRFFYRMKE-LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVT 603
Query: 296 --------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
KR + ++R + ++PD+ ++ + + + + + Q+R
Sbjct: 604 FSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMR 663
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS-GEAIGALTYKVLVRAFWE 396
K G++P+ Y + +G+ + + KM S G + TY+ L+ F E
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGLSPNLTTYETLIWGFGE 719
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 31/357 (8%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M SG+ + +L+GL G A V + G+ + YT ++ L K
Sbjct: 163 MKDSGIAVLRSHNI-VLRGLCSGGKISMAWEVFKDMSGIFSPNLIS----YTIMIDGLCK 217
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS-- 295
+ + +A+ +F M+ D +YPD+ Y ++ LG+ +KE L E R K P+
Sbjct: 218 SRKVDKAITLFKQMV-DKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVV 276
Query: 296 ------------KRIKNMHRKNWD----PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
RI+N D P L+PD+ Y+A++N S++ + + ++++
Sbjct: 277 TYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEE 336
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA-IGALTYKVLVRAFWEEG 398
+ +G P TY ++ + +SG D E FRKM +TY VL+ F +
Sbjct: 337 MLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVD 396
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
++ +AV + ME R ++ A + + LC R +A + E I + KP + F
Sbjct: 397 RLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG--KTCKPDSVLF 454
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
++ IDD + M D C P + T A++ + R +S A ++ E
Sbjct: 455 NTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHE 511
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 177/454 (38%), Gaps = 56/454 (12%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-PDIAAYHSVAVTLGQVGLLKELVK 285
+RF LL++ KA R +A F ++ N++ PD +Y+++ + G +K+ +
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMK--NVFEPDEVSYNTLMNGFFKAGDVKKALA 158
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L M+ +++ +N VL + + VFK + SG+
Sbjct: 159 LFGEMKDSGIAVLRS----------------HNIVLRGLCSGGKISMAWEVFKDM--SGI 200
Query: 346 -KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
P+ +Y + ++ + +S K D F++M +TY L+ ++ ++ EA
Sbjct: 201 FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAY 260
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+G T Y + LC GR ++A+ + + + H KP T++ LI
Sbjct: 261 DLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALING 320
Query: 465 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS-- 521
+ +++ M D C P++ T N +L ++ KA E+F + N
Sbjct: 321 LNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDP 380
Query: 522 ---GYTFLS---------GD---------GAPLKPDEYTYSSMLEA----SATAHQWEYF 556
YT L GD G L PD T++++++ S E F
Sbjct: 381 NVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF 440
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
E + K C+ D +L + + + D +L++G P +T ++
Sbjct: 441 ESIGK-----TCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTG 495
Query: 617 AIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
Y A+ + + M F ER EL +
Sbjct: 496 FCRTGRYSDALIMYHEMIEMGFP-PERHLAELVD 528
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 171/381 (44%), Gaps = 40/381 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +L+ L +AGR EA+ +F M +DC YP++ Y L+K L + +
Sbjct: 261 YNQLIHGLCEAGRIDEAVSLFVRMKDDC-CYPNVYTY---------TALIKGLCR---KN 307
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K + M +N L PDL+ YN+++ + + + +++ GL P
Sbjct: 308 VHKAMGLLDEMLERN----LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQR 363
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYG ++ + +S + + F + + G + + Y VL+ + + GK++EA M
Sbjct: 364 TYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKM 423
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ A + L LC+ G ++A+ + +++ + KP TF LI + G
Sbjct: 424 LSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMG-LKPTVYTFNILIGRMLKQGD 482
Query: 471 IDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
DD Q M E P T NA ++VY +A+++ + + +
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQ-----------MKEE 531
Query: 530 GAPLKPDEYTYSSMLEASA-TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
G P PD++TY+S+++A + F+ V K M + C+ + H +L + K
Sbjct: 532 GVP--PDDFTYTSLIKAYGKLGLTYSAFD-VLKSMFDADCE--PSHHTFLSLIKQLFDKR 586
Query: 589 HLLEHAFDSLLEA----GEIP 605
+++E + ++ +E+ G++P
Sbjct: 587 YVVEKSGETGVESVSNFGDVP 607
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K++ + + Y + L K+ R EA R+F+ + E+ + ++ Y + +VG
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEE-GVSANVIMYSVLIDGYCKVG 411
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E L E+M K P+ +NA+++ + K +F
Sbjct: 412 KVDEAGCLFEKMLSKNCS---------------PNAYTFNALIHGLCSAGNLKEALSLFD 456
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
Q+ K GLKP+ T+ + + ML+ G +D H+ +KM SGE A TY + + G
Sbjct: 457 QMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAG 516
Query: 399 KINEAVAAVRNMEQRGV 415
K+ EA + M++ GV
Sbjct: 517 KVQEAEDMMVQMKEEGV 533
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 140/347 (40%), Gaps = 32/347 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL-KPSAATYGLAMEVMLQSGKYDLVHE 370
P ++V +++ C + V + +++ K + K S Y + ++ + G D +++
Sbjct: 121 PKIIV--SMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQ 178
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+ +M + ++ T+ +++ + + G + EA + M Q G+ C
Sbjct: 179 LYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYC 238
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNI 489
+ A V E++ + E+++ LI + G ID+ +S+F MKD C PN+
Sbjct: 239 RSKDVDSAFRVFEEMPNRN-----EVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNV 293
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRAN---------------------SSGYTFLS- 527
T A++K R ++ KA L +E N S Y LS
Sbjct: 294 YTYTALIKGLCRKNV-HKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSL 352
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
L PD+ TY ++ +++ E ++ + G + ++ L+ + GK
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
F+ +L P+ F ++ N ++A++L + M
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMV 459
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 126/304 (41%), Gaps = 53/304 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L AG EAL +F+ M++ L P + ++ + + + G + K ++
Sbjct: 433 YTFNALIHGLCSAGNLKEALSLFDQMVK-MGLKPTVYTFNILIGRMLKQGDFDDAHKCLQ 491
Query: 289 RMR---QKPSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNA----- 323
+M +KP R N M + + + PD Y +++ A
Sbjct: 492 KMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLG 551
Query: 324 ----------------CVPSHQ-----WKGVF---WVFKQLRKSGLKPSAATYG-LAMEV 358
C PSH K +F +V ++ ++G++ S + +G +
Sbjct: 552 LTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVE-SVSNFGDVPGSN 610
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
M + ++D+V E F +M K G + Y+ L+ + + A+ + M++ G+ +
Sbjct: 611 MWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPS 670
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
V+ + C C ++ +A +VE + HS LE T LI + G + S+F
Sbjct: 671 EMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKT-LICGLYEEGETERGNSVF 729
Query: 479 QHMK 482
+ ++
Sbjct: 730 KKLR 733
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 163/369 (44%), Gaps = 27/369 (7%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
Y D A ++ L +VGL +L + +R P N + D+ Y
Sbjct: 28 FYLDSRALAALLKELHKVGLSNRASELFDWLRSLPD---------NHELAHLCDVYTYTT 78
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++ C Q + + ++R G+ + TY M V +++ + +L + + ++ + G
Sbjct: 79 IISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLREG 138
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+TY +L+ + G EAV + +E +G Y + +G+ + A+
Sbjct: 139 CTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHAL 198
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 498
V E++ + ++P T+T LI + G I++ + IFQ M + CE N+ T ++++
Sbjct: 199 RVYERMLA-DGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISA 257
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ + A EL +E R N KP+ T++++L A A QW+ +
Sbjct: 258 CEKAGRWQLALELLDEMHRDNC-------------KPNTVTFNALLSACAQGGQWKAAQD 304
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGK-CHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
V++ M GC+ D +A L+ R + C L+ A D + G P + ++I+A
Sbjct: 305 VFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQ-ALDEMQGQGHRPDVGVYN-VVIEA 362
Query: 618 IVQSNYEKA 626
+ +S A
Sbjct: 363 LTRSGVLSA 371
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 145/320 (45%), Gaps = 25/320 (7%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYP 262
GS +Q L+ V ++ + + Y+ L+ + KA AL ++ L+ E C P
Sbjct: 84 GSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLREGCT--P 141
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
++ Y+ + G++G +E V++++ + + +K P++ YN +L+
Sbjct: 142 NLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTK---------------PEVRTYNTILS 186
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
AC S Q + V++++ G +P+A TY + ++GK + F+ M + G
Sbjct: 187 ACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCER 246
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+TY L+ A + G+ A+ + M + + L G+W+ A V
Sbjct: 247 NVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVF 306
Query: 443 EKIKSLRHSKPLEITFTGLIISSMD-GGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYS 500
E++ S KP +++ ++IS+ D G + M+ P++G N +++ +
Sbjct: 307 EQMPSC-GCKPDAVSY-AILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALT 364
Query: 501 RNDMFS---KAKELFEETTR 517
R+ + S KA ++F+ TR
Sbjct: 365 RSGVLSAQLKAAQIFQAATR 384
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 107/247 (43%), Gaps = 19/247 (7%)
Query: 457 TFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T++ L+ + ++ + ++ Q +++ C PN+ T N ++ ++ + + +A ++ +
Sbjct: 110 TYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDA- 168
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
L G KP+ TY+++L A + Q E+ VY+ M G Q T +
Sbjct: 169 ----------LEDQGT--KPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTY 216
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM-- 633
L+ + GK F ++ G + + ++ ++ ++ A+ L++ M
Sbjct: 217 TALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHR 276
Query: 634 -AYAPFHIT-ERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 691
P +T + + + + ++D E++ + C +A S I +S R + C
Sbjct: 277 DNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRG-NQWC 335
Query: 692 RSEKERD 698
R+ + D
Sbjct: 336 RALQALD 342
>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
Length = 714
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 112/527 (21%), Positives = 207/527 (39%), Gaps = 89/527 (16%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I+ VD+L E ++ K V S +M+ E + +L+ +G K VL W+
Sbjct: 19 IKSYVDKLLSSEQSSDKVKKVL----SSMMWDEKLVSRLIVEIGRKHKKMMVADVLRWMR 74
Query: 218 GLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
++R +K S + + L + G EA+ I N+M +D + PDI +Y++V L
Sbjct: 75 EESERRKIKLSSLPFNACIRALERMGDWREAVAILNIMEKD-GVEPDIVSYNTVLSALRH 133
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
++ + +++RMR+K S PD+V +N L AC W+ +
Sbjct: 134 SPDIQNVFVMLKRMREKVS----------------PDIVSFNTALAACQRQCDWESGVAI 177
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYD------------------------------ 366
+ + + ++ T+ + + + GKYD
Sbjct: 178 LEMMSEDQIERDVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSPNIYTFNALIAVCKN 237
Query: 367 ----------------LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ F + +G +TY L+ + E GK E+ + +
Sbjct: 238 SLATSLMSRKRQNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKWKESYDILFEI 297
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
E + V+ Y L ++ A+ + EK+ R P IT+ LI + + +
Sbjct: 298 EDQHVITDVITYSTLISTFAKTRKYSLAIEMYEKMME-RQVMPNVITYNSLIFACLRANN 356
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ F M+ PN+ T + M+ D + A +LF E R
Sbjct: 357 FSQAFAFFDDMQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKE---------- 406
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+ PD T+S++L + QWE V + M +G QL+ ++ ++ +AG+
Sbjct: 407 ---IPPDPMTFSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGR-- 461
Query: 590 LLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
L+ AF L E G P+ + FT ++ V + ++A ++ M
Sbjct: 462 -LDDAFRILDECKRDGIKPNVIMFTALIHACKVARDLDRAFRVLELM 507
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/416 (18%), Positives = 164/416 (39%), Gaps = 46/416 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL + + G+ E+ I +ED ++ D+ Y ++ T + +++ E+M
Sbjct: 274 YNSLLGVYMEMGKWKESYDIL-FEIEDQHVITDVITYSTLISTFAKTRKYSLAIEMYEKM 332
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
M R+ + P+++ YN+++ AC+ ++ + F F ++ G+ P+
Sbjct: 333 ----------MERQ-----VMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQGISPNVV 377
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + + F +M + +T+ L+ + +A+ + M
Sbjct: 378 TYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDVLEWM 437
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ G+ +Y + GR DA ++++ K KP I FT LI +
Sbjct: 438 QDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKR-DGIKPNVIMFTALIHACKVARD 496
Query: 471 IDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+D + + MK DH PN+ T N +L ++ + F+ G+
Sbjct: 497 LDRAFRVLELMKEDHVTPNLVTFNVLLGTC---EVVGNSTCAFQVVGLLQEYGF------ 547
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+ + T++++++ +H+W+ VY M L + + L + A G
Sbjct: 548 ----RANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGD-- 601
Query: 590 LLEHAFDSLLE------------AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
A D +++ AG P + ++ + SNY+KA + M
Sbjct: 602 -WRRAIDVMVDMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGM 656
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/416 (17%), Positives = 163/416 (39%), Gaps = 52/416 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL + G W+++ +L + ++D+ + Y+ L++ K + A+ ++ M+
Sbjct: 277 LLGVYMEMGKWKESYDIL---FEIEDQHVITDVITYSTLISTFAKTRKYSLAIEMYEKMM 333
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P++ Y+S+ + + + M+ + + P++V
Sbjct: 334 ER-QVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQG---------------ISPNVV 377
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ ++ +C W F +F ++ + + P T+ + V S +++ + M
Sbjct: 378 TYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDVLEWM 437
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G + Y +V + G++++A + ++ G+ ++ L C R
Sbjct: 438 QDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVIMFTALIHA-CKVARD 496
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
D V ++ H P +TF L+ + G+ + ++++ N+ T N
Sbjct: 497 LDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLLQEYGFRANLQTFNT 556
Query: 495 MLKVYSRNDMFSKAKELFEET----TRANSSGYTFLS------GD--------------- 529
++K R+ + KA E++ + R + S + LS GD
Sbjct: 557 LIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAIDVMVDMRIKT 616
Query: 530 ------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
A P Y+S++ A + ++ VYKGM SG + + + ++
Sbjct: 617 EKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNLII 672
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 111/277 (40%), Gaps = 74/277 (26%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC---NLYP 262
W QAM VL+W+ + +++ +Y+ ++ + G+AGR +A RI L++C + P
Sbjct: 427 WEQAMDVLEWMQDAGIQLNIR---MYSAVVHVCGQAGRLDDAFRI----LDECKRDGIKP 479
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNWDPV---------- 309
++ + ++ L +++E M++ P+ N+ + V
Sbjct: 480 NVIMFTALIHACKVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVV 539
Query: 310 -------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL-------- 354
+L +N ++ CV SH+W+ F V+ Q++ ++PS +T+
Sbjct: 540 GLLQEYGFRANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEG 599
Query: 355 -----AMEVM-------------------------------LQSGKYDLVHEFFRKMAKS 378
A++VM ++S Y + ++ M S
Sbjct: 600 GDWRRAIDVMVDMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTS 659
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
G +TY +++ + K++E + + M+Q V
Sbjct: 660 GVRANIVTYNLIISILSGQRKLSEVLKVINEMKQEEV 696
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 113/548 (20%), Positives = 215/548 (39%), Gaps = 57/548 (10%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
FT Q+++ L+ D+ + A+ V +W K + S VY ++L LGKAG
Sbjct: 62 FTPKQLIETLRRQTDEVA---ALRVFNWAS--KQPNFVPSSSVYEEILRKLGKAGSFEYM 116
Query: 248 LRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM----RQKPSKRIKNM- 301
R+ M L C D + + G+ L E+V +++ M R KP R N+
Sbjct: 117 RRVLEEMKLSGCEF--DRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVL 174
Query: 302 ----------------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
H + D+ +N ++ A +HQ + + +++ GL
Sbjct: 175 LNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGL 234
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P T+ M+ ++ G D +M + G +T VL+ F ++G+I++A++
Sbjct: 235 SPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS 294
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
++ G Y L LC G + AM VV+ + L P T+ LI
Sbjct: 295 FIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML-LGGLDPDIYTYNSLISGL 353
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN----- 519
G I++ + I M C PN T NA++ + + +A E+ T
Sbjct: 354 CKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDV 413
Query: 520 -----------------SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
S+ F G +PDE+TY+ ++++ ++ + E + K
Sbjct: 414 CTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 473
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M L+GC + + L+ + + E FD + G + + ++
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKR 533
Query: 623 YEKAVALINAMAYAPFHITERQWTELF----ESNEDRISRDKLEKLLNALCNCNAASSEI 678
E A L++ M + + L ++ + + + D ++ + ++ CN + +
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593
Query: 679 TVSNLSRA 686
+S L +A
Sbjct: 594 LISGLCKA 601
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 145/334 (43%), Gaps = 25/334 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD YN ++N K V + GL P TY + + + G+ + +
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M + A+TY ++ + +E +++EA R + +G++ + L LC
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCL 425
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 490
+ + AM + E++K + +P E T+ LI S +++ +++ + M+ + C N+
Sbjct: 426 SSNHKSAMDLFEEMKG-KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVV 484
Query: 491 TVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTFLSG--------DGAPL---- 533
N ++ + +N +A+E+F+E +R + + T + G D A L
Sbjct: 485 IYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM 544
Query: 534 -----KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+PD++TY+S+L + + + M SGC D +A L+ +AG+
Sbjct: 545 IMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRV 604
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ S+ G + P + +IQA+ + N
Sbjct: 605 QVASRLLRSIQMKGMVLTPHAYNP-VIQALFKRN 637
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/433 (20%), Positives = 180/433 (41%), Gaps = 38/433 (8%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + G T+ + L+ G +G QA+S + + D +F Y L+ L K
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPD---QFTYNTLVNGLCK 320
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G A+ + + ML L PDI Y+S+ L ++G ++E VK++++M +
Sbjct: 321 IGHAKHAMEVVDAMLLG-GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCS---- 375
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
P+ V YNA++++ ++ + + L G+ P T+ ++ +
Sbjct: 376 -----------PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLC 424
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
S + + F +M G TY +L+ + K+ EA+ ++ ME G
Sbjct: 425 LSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVV 484
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
+Y L C N R ++A + ++++ L+ +T+ LI ++D +
Sbjct: 485 IYNTLIDGFCKNKRIEEAEEIFDEME-LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQ 543
Query: 481 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
M + P+ T N++L + + KA ++ + T SSG PD T
Sbjct: 544 MIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMT---SSG----------CNPDIVT 590
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW--LLVEASRAGKCHLLEHAFDS 597
Y++++ A + + + + + + G L T HA+ ++ + + H F
Sbjct: 591 YATLISGLCKAGRVQVASRLLRSIQMKGMVL--TPHAYNPVIQALFKRNRTHEAMRLFRE 648
Query: 598 LLEAGEIPHPLFF 610
+L+ E P + +
Sbjct: 649 MLDKSEPPDAITY 661
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 124/310 (40%), Gaps = 22/310 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + + R++ G++ L++GL + + AM + + + G
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG 443
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGL 279
+ D F Y L+ L + + EAL + M L C ++ Y+++ +
Sbjct: 444 CRPD---EFTYNMLIDSLCSSRKLEEALNLLKEMELNGCA--RNVVIYNTLIDGFCKNKR 498
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
++E ++ + M + R D V YN +++ S + + + Q
Sbjct: 499 IEEAEEIFDEMELQGVSR---------------DSVTYNTLIDGLCKSKRVEDAAQLMDQ 543
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ GL+P TY + ++G + + M SG +TY L+ + G+
Sbjct: 544 MIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGR 603
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ A +R+++ +G+V T Y + L R +AM + ++ + P IT+
Sbjct: 604 VQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLD-KSEPPDAITYK 662
Query: 460 GLIISSMDGG 469
+ +GG
Sbjct: 663 IVYRGLCNGG 672
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 17/202 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L K+ R +A ++ + M+ + L PD Y+S+ + G +K+ +++ M
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIME-GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTM 579
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
PD+V Y +++ + + + + + ++ G+ +
Sbjct: 580 TSSGCN---------------PDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPH 624
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG-KINEAVAAVRN 409
Y ++ + + + FR+M E A+TYK++ R G I EAV
Sbjct: 625 AYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVE 684
Query: 410 MEQRGVVGTASVYYELACCLCN 431
M +RG + S + LA LC
Sbjct: 685 MIERGNIPEFSSFVMLAEGLCT 706
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 151/358 (42%), Gaps = 20/358 (5%)
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G +P TYG+ + + + G DL KM + G L Y ++ + +++A
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ + ME +G+ Y L CLCN GRW DA ++ + R P TF+ LI
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPDVFTFSALID 129
Query: 464 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ + G + + ++ M K +P+I T ++++ + +D +AK++FE S
Sbjct: 130 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV----SK 185
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+ F PD TY+++++ + E V++ M+ G + + L+
Sbjct: 186 HCF---------PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 236
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE 642
+AG C + + F ++ G P+ + + +L EKA+ + + + T
Sbjct: 237 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 296
Query: 643 RQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR--SEKERD 698
+ + E K+E + CN + + V + + CR S++E D
Sbjct: 297 YTYNIMIEG---MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 351
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 150/413 (36%), Gaps = 65/413 (15%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y V L + G L+ +M Q LEP +++YN ++
Sbjct: 14 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK---------------LEPGVLIYNTII 58
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +FK++ G++P+ TY + + G++ M +
Sbjct: 59 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 118
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
T+ L+ AF +EGK+ EA M +R + + Y L C + R +A +
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 178
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-------------------- 481
E + S +H P +T+ LI +++ + +F+ M
Sbjct: 179 FEFMVS-KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 237
Query: 482 ----------------KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
D PNI T N +L +N KA +FE R+
Sbjct: 238 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK------ 291
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
++P YTY+ M+E A + E ++ ++L G + D + ++ R
Sbjct: 292 -------MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 344
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
G + F + E G +P+ + ++ + + E + LI M F
Sbjct: 345 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 397
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 122/272 (44%), Gaps = 24/272 (8%)
Query: 222 KRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS----------- 269
KR + V Y+ L+ R EA ++F M+ + +PD+ Y++
Sbjct: 149 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK-HCFPDVVTYNTLIKGFCKYKRV 207
Query: 270 -----VAVTLGQVGLLKELVK---LIERMRQKPSKRI-KNMHRKNWDPVLEPDLVVYNAV 320
V + Q GL+ V LI+ + Q + + + ++ + P+++ YN +
Sbjct: 208 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 267
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
L+ + + + VF+ L++S ++P+ TY + +E M ++GK + + F ++ G
Sbjct: 268 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 327
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ Y ++ F +G EA A + M++ G + + Y L +G + +
Sbjct: 328 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 387
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
++++++S + + + GL+ + + G +D
Sbjct: 388 LIKEMRSCGFAG--DASTIGLVTNMLHDGRLD 417
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 190/446 (42%), Gaps = 45/446 (10%)
Query: 197 LKGLGDKGSWRQAMSVLDWV-----YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
+K L +G+ RQA+ V ++ Y LK+ + +++ILG+ G+ A IF
Sbjct: 1 MKELEIRGARRQALQVFRFLQEHLEYELKEHNCVT-------IISILGREGKLGLAREIF 53
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
M + P + AY ++ + GLLKE L E M++K
Sbjct: 54 EGM-SKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCS--------------- 97
Query: 312 PDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P+++ YN ++NAC +++ + +F++++++G++P+ TY + + +D +
Sbjct: 98 PNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQ 157
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
++M ++Y ++ + G+++EAV M++ G + Y L
Sbjct: 158 ILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYA 217
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
GR++ AM + ++ P T+ +I GG + +F M + C P+
Sbjct: 218 REGRYEKAMCLFVGMED-EGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDR 276
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N ML YS+ +A++L + RA + PD +TY+ +L+A+
Sbjct: 277 VTYNTMLDAYSKWSRRGRARDLLKTMKRAGCT-------------PDLWTYNILLDAAGK 323
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A ++ + +G + + L+ R G E A+ + G +P+
Sbjct: 324 AGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATA 383
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAY 635
+ L+ + K + I +++Y
Sbjct: 384 YCG-LMNSYSHHGMYKVLCCIRSLSY 408
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 191/473 (40%), Gaps = 77/473 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++++LG+ G + L +F+
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFD 165
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + + +Y ++ G+ G + ++L++RM+ + P
Sbjct: 166 EMPSQ-GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDK---------------ISP 209
Query: 313 DLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
++ YN V+NAC W+G+ +F ++R G++P TY + G D
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 269
Query: 372 FRKMAKSG------------EAIGAL-----------------------TYKVLVRAFWE 396
FR M G E G L +Y VL+ A+ +
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAK 329
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G I EA+ M+ G A+ Y L +GR+ D + ++KS ++ P
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS-SNTDPDAA 388
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ LI +GG+ + +++F M +++ EP++ T ++ + + A+++ +
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
T AN + P Y+ ++EA A +E + M G +
Sbjct: 449 T-AND------------IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETY 495
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAV 627
LL +R G E L+++G IP I+A Q +E+AV
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSG-IPRNRDTFNAQIEAYKQGGKFEEAV 547
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 155/386 (40%), Gaps = 31/386 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL+ G EA +F M D + PD+ Y + T G++ L+++ L+
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSE 307
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M S PD+ YN +L A S K VF Q++ +G P+A
Sbjct: 308 MASGGSL---------------PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + QSG+YD V + F +M S A TY +L+ F E G E V +
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + + Y + G +DA +++ + + P +TG+I +
Sbjct: 413 MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA-NDIVPSSKAYTGVIEAFGQAA 471
Query: 470 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
++ + F M + P+I T +++L ++R + +++ + L
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSR-----------LVD 520
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
G P D T+++ +EA ++E Y M S C D+ +L S A
Sbjct: 521 SGIPRNRD--TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLV 578
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEML 614
F+ + + +P + + ML
Sbjct: 579 DECREQFEEMKASDILPSIMCYCMML 604
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 148/376 (39%), Gaps = 33/376 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ GS ++AM V + ++ + Y+ LL + G++GR + ++F L +
Sbjct: 323 LLEAYAKSGSIKEAMGVF---HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF-LEM 378
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N PD A Y+ + G+ G KE+V L M ++ +EPD+
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN---------------IEPDME 423
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++ AC + + + + + + PS+ Y +E Q+ Y+ F M
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G TY L+ +F G + E+ A + + G+ + G++
Sbjct: 484 HEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
++A+ ++ R P E T ++ +D+C F+ MK P+I
Sbjct: 544 EEAVKTYVDMEKSR-CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
ML VY + + + EL EE S + G + +Y S W+
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQ---MIKGDYDDDS---------NWQ 650
Query: 555 YFEYVYKGMALSGCQL 570
EYV + GC L
Sbjct: 651 IVEYVLDKLNSEGCGL 666
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 34/245 (13%)
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
A V+ E A G WQ ++ + + ++ KP E +T +I G +D C+ +F
Sbjct: 109 ALVFKEFA----GRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF 164
Query: 479 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE-------------TTRANSSGYT 524
M ++ + A++ Y RN + + EL + T N+
Sbjct: 165 DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARG 224
Query: 525 FLSGDG----------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
L +G ++PD TY+++L A A + E V++ M G D T
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
++ L+ GK LE D L E G +P + +L + ++A+ + +
Sbjct: 285 YSHLV---ETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 632 AMAYA 636
M A
Sbjct: 342 QMQAA 346
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 33/352 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT L+ K G A R+F+ M + + PD Y +V L Q G + E KL
Sbjct: 260 IYTTLIDGFCKLGNVSSAYRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFHE 318
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K LEPD V Y A+++ + K F + Q+ + GL P+
Sbjct: 319 MVCKR---------------LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 363
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + G+ D +E +M + G + TY LV + G I++AV +++
Sbjct: 364 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 423
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME G A Y L C + A ++ ++ R +P +TF L+ G
Sbjct: 424 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD-RELQPTVVTFNVLMNGFCMSG 482
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS-RNDMFSKAKELFEETTRANSSGYTFLS 527
++D + + M + PN T N+++K Y RN+M RA + Y +
Sbjct: 483 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM------------RATTEIYRGMC 530
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
G + PD TY+ +++ A + ++++ M G L + + L+
Sbjct: 531 AKG--VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 580
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 18/249 (7%)
Query: 335 WVFK---QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
WV K +++ GLKP+ TY + ++ ++GK R+M G A + Y L+
Sbjct: 206 WVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLI 265
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
F + G ++ A M++R + Y + C LC GR +A + ++ R
Sbjct: 266 DGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR-L 324
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
+P E+T+T LI G + + S+ Q ++ PNI T A+ + A E
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
L E R L+ + YTY+S++ A + + K M ++G
Sbjct: 385 LLHEMCRKG-------------LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP 431
Query: 571 DQTKHAWLL 579
D + L+
Sbjct: 432 DAVTYTTLM 440
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 137/360 (38%), Gaps = 58/360 (16%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L P+ Y+ V + L + G + E +++ M + + PD V+Y
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG---------------IAPDGVIYTT 263
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++ + +F +++K + P TY + + Q+G+ + F +M
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+TY L+ + +EGK+ EA + M Q G+ Y LA LC G A
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383
Query: 440 LVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 497
++ ++ R L I T+ L+ G+ID + + + M+ P+ T ++
Sbjct: 384 ELLHEM--CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMD 441
Query: 498 VYSRNDMFSKAKELFEE-----------TTRANSSGYTFLSG---DGAPL---------K 534
Y ++ +A EL + T +G+ +SG DG L
Sbjct: 442 AYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC-MSGMLEDGEKLLKWMLEKGIM 500
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSG---------------CQLDQTKHAWLL 579
P+ TY+S+++ + +Y+GM G C+ K AW L
Sbjct: 501 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL 560
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 22/291 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ K G+ EA + N ML+ L P+I Y ++A L + G + +L+
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQ-MGLTPNIVTYTALADGLCKCGEVDTANELLHE 388
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +K LE ++ YN+++N + + K + +G P A
Sbjct: 389 MCRKG---------------LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 433
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY M+ +S + HE R+M +T+ VL+ F G + + ++
Sbjct: 434 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 493
Query: 410 MEQRGVVGTASVYYELA--CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M ++G++ A+ Y L C+ NN R A + + + P T+ LI
Sbjct: 494 MLEKGIMPNATTYNSLIKQYCIRNNMR---ATTEIYRGMCAKGVVPDGNTYNILIKGHCK 550
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
++ + + + M + + NA++K + + F +A+ELFE+ R
Sbjct: 551 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 601
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 16/197 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ L KAG +A+++ M E +PD Y ++ + +E+V+ E
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAVTYTTLMDAYCKS---REMVRAHE 454
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+RQ D L+P +V +N ++N S + + K + + G+ P+
Sbjct: 455 LLRQM------------LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 502
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A TY ++ E +R M G TY +L++ + + EA R
Sbjct: 503 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 562
Query: 409 NMEQRGVVGTASVYYEL 425
+M +G T S Y L
Sbjct: 563 DMVGKGFNLTVSSYNAL 579
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 23/303 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G + A+ V+D + L++ D + Y L++ L K G EA+++ N M+
Sbjct: 307 LVNGLSKTGHVKHALEVMDMM--LREGFD-PDIYTYNSLISGLCKLGEVDEAVKVLNQMI 363
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E DC+ P+ Y+++ TL + ++E KL + K + PD+
Sbjct: 364 ERDCS--PNTVTYNTIISTLCKENQVEEATKLALVLTGKG---------------ILPDV 406
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN+++ S ++K+++ G P TY + ++ + GK ++
Sbjct: 407 CTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE 466
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M SG A +TY L+ F + +I EA ME +GV + Y L LC + R
Sbjct: 467 MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
++A +++++ + +P + T+ L+ G I I Q M D CEP+I T
Sbjct: 527 VEEASQLMDQM-IMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYG 585
Query: 494 AML 496
++
Sbjct: 586 TLI 588
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 137/329 (41%), Gaps = 41/329 (12%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD +N ++N + K V + + G P TY + + + G+ D +
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M + + +TY ++ +E ++ EA + +G++ Y L LC
Sbjct: 359 LNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCL 418
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 490
+ AM + +++K+ + P E T+ LI S G + + +++ + M+ C N+
Sbjct: 419 SRNHTVAMELYKEMKT-KGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVI 477
Query: 491 TVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSGDGA--------------- 531
T N ++ + +N ++A+E+F++ NS Y L DG
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI-DGLCKSERVEEASQLMDQ 536
Query: 532 ----PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
L+PD++TY+S+L A + + + MA GC+ D + L+ +AG+
Sbjct: 537 MIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGR 596
Query: 588 C---------------HLLEHAFDSLLEA 601
+L HA++ +++A
Sbjct: 597 VEAATKLLRTIQMKGINLTPHAYNPVIQA 625
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 125/294 (42%), Gaps = 21/294 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD+ +N ++ A +HQ + + +++ GL P T+ M+ ++ G D
Sbjct: 191 IRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAM 250
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR-GVVGTASVYYELACC 428
+M ++G + +T VLV F +EG+I EA+ + M R G + L
Sbjct: 251 RVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNG 310
Query: 429 LCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
L G + A+ V++ + LR P T+ LI G +D+ + + M + C
Sbjct: 311 LSKTGHVKHALEVMDMM--LREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCS 368
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN T N ++ + + +A +L L+G G + PD TY+S+++
Sbjct: 369 PNTVTYNTIISTLCKENQVEEATKL-----------ALVLTGKG--ILPDVCTYNSLIQG 415
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ +YK M GC D+ + L+ GK L+ A + L E
Sbjct: 416 LCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK---LQEALNLLKE 466
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
++ Y L+ L K+ R EA ++ + M+ + L PD Y+S+ + G +K+
Sbjct: 509 RNSVTYNTLIDGLCKSERVEEASQLMDQMIME-GLRPDKFTYNSLLTYFCKAGDIKKAAD 567
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+++ M EPD+V Y ++ + + + + + ++ G+
Sbjct: 568 IVQTMASDGC---------------EPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGI 612
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG-KINEAV 404
+ Y ++ + + + FR+M + EA A+TYK++ R + G I EAV
Sbjct: 613 NLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAV 672
Query: 405 AAVRNMEQRGVVGTASVYYELA 426
V M +RG V S +Y LA
Sbjct: 673 DFVMEMLERGYVPEFSSFYMLA 694
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 71/373 (19%), Positives = 140/373 (37%), Gaps = 29/373 (7%)
Query: 116 LKEMFEKDL---NWVLDDDVQLGS-DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMT 171
L+E F+ D+ N ++ +LG D K + E+ ++ L +
Sbjct: 328 LREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQV 387
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVY 231
+ K ++ G++ L++GL + AM + +K K F Y
Sbjct: 388 EEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKE---MKTKGCHPDEFTY 444
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
L+ L G+ EAL + M E ++ Y+++ + + E ++ ++M
Sbjct: 445 NMLIDSLCFRGKLQEALNLLKEM-EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQME 503
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ R + V YN +++ S + + + Q+ GL+P T
Sbjct: 504 LQGVSR---------------NSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFT 548
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + ++G + + MA G +TY L+ + G++ A +R ++
Sbjct: 549 YNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQ 608
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPL--EITFTGLIISSMDG 468
+G+ T Y + L R ++A+ L E I+ + +I F GL G
Sbjct: 609 MKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGL---CQGG 665
Query: 469 GHIDDCISIFQHM 481
G I + + M
Sbjct: 666 GPIGEAVDFVMEM 678
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 138/304 (45%), Gaps = 17/304 (5%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+ Y A ++ CV + Q + + +++ G++ + T+ M V ++ G+ L + +
Sbjct: 135 DVYTYTAAISICVSAQQLERALELSADMQRRGVQRNVHTHSALMNVCIKCGQLKLALDVW 194
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
M + G +TY L+ + + G+ +A+ +R M+ +G+ Y L +
Sbjct: 195 EDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTS 254
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEIT-FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
G+WQ A+ + E++++ H+ L T + LI + G + + ++ M + CE ++
Sbjct: 255 GQWQTALQLYEEMRAAGHA--LNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVI 312
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T ++++ ++ + A F+E + N +P+ T++S++ A A
Sbjct: 313 TYSSLISACEKSGEWQLALRFFDECLKDN-------------CRPNVITFNSLITACAQG 359
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
QWE +++ M GC D + L+ R GK L AF ++ G P + +
Sbjct: 360 AQWEKARELFELMQQQGCTPDVVTYTALISAYERGGKWQLALQAFQAMQAKGCKPDSIVY 419
Query: 611 TEML 614
++
Sbjct: 420 NAII 423
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 153/379 (40%), Gaps = 67/379 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRD---LKSRFVYTKLLAILGKAGRPHEALRIFN 252
LLK L G +A D V L D + L + YT ++I A + AL +
Sbjct: 101 LLKELARTGLAHRAQEFFDHVLALGDSTEAARLADVYTYTAAISICVSAQQLERALELSA 160
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + + ++ + ++ + G LK + + E M++ D ++ P
Sbjct: 161 DM-QRRGVQRNVHTHSALMNVCIKCGQLKLALDVWEDMQR--------------DGIV-P 204
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
++V YN +++ QW+ V ++++ G++P TY M SG++ + +
Sbjct: 205 NVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLY 264
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M +G A+ +Y L+ A + G + + + R M Q+G + Y L +
Sbjct: 265 EEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISACEKS 324
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV 492
G WQ L + F D+C +KD+C PN+ T
Sbjct: 325 GEWQ-----------------LALRF------------FDEC------LKDNCRPNVITF 349
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N+++ ++ + KA+ELFE + + PD TY++++ A +
Sbjct: 350 NSLITACAQGAQWEKARELFELMQQQGCT-------------PDVVTYTALISAYERGGK 396
Query: 553 WEYFEYVYKGMALSGCQLD 571
W+ ++ M GC+ D
Sbjct: 397 WQLALQAFQAMQAKGCKPD 415
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 32/319 (10%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y+ + G+ G + EL +L E+M K P+ + +N ++
Sbjct: 823 PDVFTYNLLLDAHGKSGKINELFELYEQMICSSCK---------------PNTITHNIII 867
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V S+ +F L P+ TYG ++ +L+SG+ + E F +M G
Sbjct: 868 ANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCR 927
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
Y +L+ F + G +N A + M + G+ Y L CLC GR DA+
Sbjct: 928 PNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHY 987
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGH-IDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
EK+K + L+ L+I + H I++ ++++ M+ P++ T N+++
Sbjct: 988 FEKLK--QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNL 1045
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
M +A +L+EE F+ L+P+ +TY++++ + + + V
Sbjct: 1046 GVAGMVEQAGKLYEE--------LQFIG-----LEPNVFTYNALIRGYSMSGNSDSAYAV 1092
Query: 560 YKGMALSGCQLDQTKHAWL 578
YK M + GC + A L
Sbjct: 1093 YKRMMVGGCSPNTGTFAQL 1111
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 175/416 (42%), Gaps = 41/416 (9%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYG-LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
L + KGL +G RQ + +G +++ + + Y L+ +L ++G EAL ++
Sbjct: 163 LIIFKGLFIRGGLRQT----PFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYR 218
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQ---VGLLKELVKLIERMRQKP--------------S 295
M+ + L P + + ++ V G+ +K L++ +E + KP +
Sbjct: 219 RMVLE-GLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRA 277
Query: 296 KRIKNMHR---KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
RI R + D PD+V Y +++A + + +F +++ S KP TY
Sbjct: 278 GRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTY 337
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++ G V EF+ +M G A +T+ +LV A + G I+EA + M +
Sbjct: 338 ITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRK 397
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+GV+ Y L L R DA+ + +++L P T+ I G D
Sbjct: 398 QGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETL-GVVPTAYTYILFIDFYGKSGRSD 456
Query: 473 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ F+ MK PNI NA L + +AK +F R S+G
Sbjct: 457 KALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFN---RLKSNG--------- 504
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
L PD TY+ M++ + A Q + + M+ + C+ D L+ +AG+
Sbjct: 505 -LAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGR 559
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/364 (18%), Positives = 147/364 (40%), Gaps = 20/364 (5%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+ + +LV+ L + + + + +M + G++ L+ GL A
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA- 423
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
LD ++ + + + Y + GK+GR +AL F M + + P+I A ++
Sbjct: 424 --LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKM-KIRGIAPNIVACNAS 480
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+L ++G L+E + R++ L PD V YN ++ + Q
Sbjct: 481 LYSLAEMGRLREAKVIFNRLKSNG---------------LAPDSVTYNMMMKCYSKAGQV 525
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ + ++ +P + + ++G+ D + F ++ A +TY L
Sbjct: 526 DEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTL 585
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ +EG++ A+ +M G + + CLC N A+ ++ K+ ++ +
Sbjct: 586 IAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTM-N 644
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
P +TF +I + + D I +F MK P+ T+ +L +N + A +
Sbjct: 645 CMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFK 704
Query: 511 LFEE 514
+ E+
Sbjct: 705 IAED 708
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 149/409 (36%), Gaps = 106/409 (25%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT + +LG+AGR EA RI M ED PD+ Y + L G L + ++L
Sbjct: 265 YTYTICIRVLGRAGRIDEACRIMKRM-EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFV 323
Query: 289 RMR---QKPSK-----------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
+M+ KP + R+K + PD++ + ++NA +
Sbjct: 324 KMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAG 383
Query: 329 QWKGVFWVFKQLRKSGL-----------------------------------KPSAATYG 353
F + +RK G+ P+A TY
Sbjct: 384 NIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYI 443
Query: 354 LAMEVMLQSGKYDLVHEFFRKMA-----------------------------------KS 378
L ++ +SG+ D E F KM +
Sbjct: 444 LFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSN 503
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G A ++TY ++++ + + G+++EA+ + +M + V L L GR +A
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
+ ++K ++ + P +T+ LI G + + +F M + C PN T N +L
Sbjct: 564 WKMFCRLKDMKLA-PTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILD 622
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ND A ++ + T N PD T+++++
Sbjct: 623 CLCKNDEVDLALKMLYKMTTMNC-------------MPDVLTFNTIIHG 658
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 123/310 (39%), Gaps = 50/310 (16%)
Query: 336 VFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
VF + K G+KP+ +Y +E L ++ F +M +G A TY +L+ A
Sbjct: 776 VFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAH 835
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ GKINE +Y ++ C C +++ +KS K L
Sbjct: 836 GKSGKINELF---------------ELYEQMICSSCKPNTITHNIIIANLVKSNSLDKAL 880
Query: 455 EI--------------TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
++ T+ L+ + G +++ +F+ M D+ C PN N ++ +
Sbjct: 881 DLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGF 940
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
+ + A ELF+ R ++PD +Y+S++ A + + +
Sbjct: 941 GKTGDVNTACELFKRMVREG-------------IRPDLKSYTSLVGCLCEAGRVDDALHY 987
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQ 616
++ + +G LD + ++ G+ H +E A +D + G P + +++
Sbjct: 988 FEKLKQTGLYLDSIAYNLMI---DGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILN 1044
Query: 617 AIVQSNYEKA 626
V E+A
Sbjct: 1045 LGVAGMVEQA 1054
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 131/308 (42%), Gaps = 23/308 (7%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
KRDL + + K L I G + A F M E + + +Y+ + L Q GL +
Sbjct: 156 KRDLNTYLIIFKGLFIRGGLRQTPFA---FGKMRE-AGFHLNAYSYNGLIHLLLQSGLCR 211
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
E +++ RM + L+P L ++A++ A + V + +++
Sbjct: 212 EALEMYRRMVLEG---------------LKPSLKTFSALMVATGKRRDTETVKSLLEEME 256
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
GLKP+ TY + + V+ ++G+ D ++M G +TY VL+ A GK++
Sbjct: 257 SLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLD 316
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+A+ M+ Y + + G ++++ ++ P ITFT L
Sbjct: 317 DAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYA-PDVITFTIL 375
Query: 462 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE--ETTRA 518
+ + G+ID+ + M K PN+ T N ++ R + A +LF ET
Sbjct: 376 VNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGV 435
Query: 519 NSSGYTFL 526
+ YT++
Sbjct: 436 VPTAYTYI 443
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 95/232 (40%), Gaps = 23/232 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
LL GL G +A + + + YG + + +Y L+ GK G + A +F
Sbjct: 901 LLDGLLKSGRLEEAKELFEEMVDYGCR-----PNNAIYNILINGFGKTGDVNTACELFKR 955
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M+ + + PD+ +Y S+ L + G + + + E+++Q L D
Sbjct: 956 MVRE-GIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG---------------LYLD 999
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ YN +++ SH+ + ++ +++ G+ P TY + + +G + + +
Sbjct: 1000 SIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYE 1059
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
++ G TY L+R + G + A A + M G + +L
Sbjct: 1060 ELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 168/373 (45%), Gaps = 38/373 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ LG++G W +A+ ++ + +R+ + + + +++ILG+ G+ A +F L
Sbjct: 154 LLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLA-SAMISILGRLGQVELAKNVFETAL 212
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS----------------- 295
+ + A+ ++ G+ G E +K+ E M+ KP+
Sbjct: 213 NE-GYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVD 271
Query: 296 -KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
R + + ++PD + +N++L C W+ +F ++ G++ TY
Sbjct: 272 FNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNT 331
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + + G+ DL + +M + +TY ++ + + G+++EA+ M+
Sbjct: 332 LLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFAS 391
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ Y L GR+++A+ V ++++S K +T+ L+ G ++
Sbjct: 392 IGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKD-AVTYNALLGGYGKQGKYEEV 450
Query: 475 ISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+F+ MK + PN+ T + ++ VYS+ ++ +A E+F E +A L
Sbjct: 451 KRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG-------------L 497
Query: 534 KPDEYTYSSMLEA 546
K D YS++++A
Sbjct: 498 KADVVLYSALIDA 510
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 170/394 (43%), Gaps = 38/394 (9%)
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
A A+ ++ RL + E+ AKN F +N+ G T L+ G G +A+ V +
Sbjct: 188 ASAMISILGRLGQVEL-AKN-VFETALNE-GYGNTVYAFSALISAYGRSGYCDEAIKVFE 244
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRP-HEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ K +L Y ++ GK G + A IF+ ML + + PD ++S+
Sbjct: 245 TMKSSGLKPNL---VTYNAVIDACGKGGVDFNRAAEIFDEMLRN-GVQPDRITFNSLLAV 300
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
G+ GL + L M ++R +E D+ YN +L+A Q
Sbjct: 301 CGRGGLWEAARNLFSEM----------LYRG-----IEQDIFTYNTLLDAVCKGGQMDLA 345
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F + ++ + + P+ TY ++ ++G+ D F +M + + ++Y L+
Sbjct: 346 FQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSI 405
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ + G+ EA+ + ME G+ A Y L G++++ V E++K+ R P
Sbjct: 406 YAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIF-P 464
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+T++ LI GG + + +F+ K + ++ +A++ +N + A
Sbjct: 465 NLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFL 524
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+E T+ ++P+ TY+S+++A
Sbjct: 525 DEMTKEG-------------IRPNVVTYNSIIDA 545
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 132/322 (40%), Gaps = 45/322 (13%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y LL+I K GR EAL + M E + D Y+++ G+ G +E+ ++
Sbjct: 396 RVSYNTLLSIYAKLGRFEEALNVCKEM-ESSGIKKDAVTYNALLGGYGKQGKYEEVKRVF 454
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M+ ++RI P+L+ Y+ +++ ++ VF++ +K+GLK
Sbjct: 455 EEMK---AERIF------------PNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKA 499
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG--------- 398
Y ++ + ++G + F +M K G +TY ++ AF G
Sbjct: 500 DVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPP 559
Query: 399 ------KINEAVAAVRNMEQRGVVG------TASVYYELA----CCLCNNGRWQDAMLVV 442
K++ + V VG ++ +LA C R + +L +
Sbjct: 560 YETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCI 619
Query: 443 EKIKSLRHS---KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVY 499
+ H KP +TF+ ++ + +D + + ++ G + +L Y
Sbjct: 620 LAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 679
Query: 500 SRNDMFSKAKELFEETTRANSS 521
N ++ +A+ LF+E + +SS
Sbjct: 680 GDN-VWVQAQSLFDEVKQMDSS 700
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 15/194 (7%)
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM-FSKAKELFEET 515
F+ LI + G+ D+ I +F+ MK +PN+ T NA++ + + F++A E+F+E
Sbjct: 223 FSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEM 282
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
R ++PD T++S+L WE ++ M G + D +
Sbjct: 283 LRNG-------------VQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTY 329
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
LL + G+ L + +P+ + ++ ++ ++A+ L N M +
Sbjct: 330 NTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKF 389
Query: 636 APFHITERQWTELF 649
A + + L
Sbjct: 390 ASIGLDRVSYNTLL 403
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/499 (21%), Positives = 199/499 (39%), Gaps = 40/499 (8%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+S F Y ++ L K G A +F M ++ PDI Y+S+ G++GLL E +
Sbjct: 253 RSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECIC 311
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ E+M+ D +PD++ YNA++N + F +++ +GL
Sbjct: 312 IFEQMK---------------DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 356
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
KP+ TY ++ + G +FF M + TY L+ A + G + EA+
Sbjct: 357 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 416
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
V + Q G+ Y L LC GR ++A V + + P + T+T L+
Sbjct: 417 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN-AGVAPNQETYTALVHGF 475
Query: 466 MDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAK----ELFEETTRANS 520
+ ++ I + MK+ C +P++ +L +AK E+ E N+
Sbjct: 476 IKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNA 535
Query: 521 SGYT------FLSGDGAP------------LKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
YT F SG L E TY ++++ + + + +
Sbjct: 536 VIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGR 595
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M+ G Q + + L+ + + + FD +L+ G +P + +T ++ + N
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 655
Query: 623 YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSN 682
++A+ L + M + +T L K LL+ + E+
Sbjct: 656 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 715
Query: 683 LSRALHALCRSEKERDLSS 701
L + +AL + ++ +L +
Sbjct: 716 LIKKYYALGKVDEALELQN 734
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 144/360 (40%), Gaps = 63/360 (17%)
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+LKEL+ L R PS + ++ + V P V++A+ +A + + F
Sbjct: 153 AVLKELICL---RRVLPSWDVFDLLWATRN-VCVPGFGVFDALFSALIELGMLEEASECF 208
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
++RK + P + + + + G+ DL +FF+ M +G TY +++ +E
Sbjct: 209 LKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKE 268
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
G + A + M++ G P +T
Sbjct: 269 GDLEMARSLFTQMKEAGFT------------------------------------PDIVT 292
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEET- 515
+ LI G +D+CI IF+ MKD C+P++ T NA++ + + + KA E E
Sbjct: 293 YNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMK 352
Query: 516 ---TRANSSGYT------------------FLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+ N Y+ F+ L P+E+TY+S+++A+ A
Sbjct: 353 ANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLA 412
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + + +G +L+ + LL G+ E F ++L AG P+ +T ++
Sbjct: 413 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 472
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 108/528 (20%), Positives = 213/528 (40%), Gaps = 51/528 (9%)
Query: 250 IFNLMLEDCNL-YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKN 305
+F+L+ N+ P + ++ L ++G+L+E + +MR+ P R N
Sbjct: 170 VFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHR 229
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
V DL S ++ FK + +G+K S TY + ++ + + G
Sbjct: 230 LSKVGRGDL------------SRKF------FKDMGAAGIKRSVFTYNIMIDYLCKEGDL 271
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
++ F +M ++G +TY L+ + G ++E + M+ Y L
Sbjct: 272 EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNAL 331
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 484
C C R A + ++K+ KP +T++ I + G + + I F M+
Sbjct: 332 INCFCKFERMPKAFEFLHEMKA-NGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 390
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
PN T +++ + ++A +L EE +A +K + TY+++L
Sbjct: 391 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG-------------IKLNVVTYTALL 437
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE- 603
+ + + E V++ M +G +Q + L+ +A + +E+A D L E E
Sbjct: 438 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE---MEYAKDILKEMKEK 494
Query: 604 --IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL 661
P L + +L +S E+A LI + + + +T L ++ +
Sbjct: 495 CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEA 554
Query: 662 EKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQA-IDISPLHGIHE 720
LL + + ++E+T L + LC+S ++ + HFG + I + P ++
Sbjct: 555 LTLLEEMLDLGLIATEVTYCAL---IDGLCKSGLVQE--AMHHFGRMSEIGLQPNVAVYT 609
Query: 721 AFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDID-SINHSSL 767
A +N A +F+ L +P K ID ++ H +L
Sbjct: 610 ALVDGLCKNNCFEVAKKLFDEM-LDKGMMPDKIAYTALIDGNMKHGNL 656
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 142/386 (36%), Gaps = 69/386 (17%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D + A+ K V + Q+G+ LL GL ++G ++A V +
Sbjct: 401 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR---AML 457
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ ++ YT L+ KA A I M E C + PD+ Y ++ L L
Sbjct: 458 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC-IKPDLLLYGTILWGLCNESRL 516
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+E LI ++
Sbjct: 517 EEAKLLI--------------------------------------------------GEI 526
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
++SG+ +A Y M+ +SG+ +M G +TY L+ + G +
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLV 586
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
EA+ M + G+ +VY L LC N ++ A + +++ + P +I +T
Sbjct: 587 QEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLD-KGMMPDKIAYTA 645
Query: 461 LIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
LI +M G++ + +++ M + E ++ A++ S + KA+ L +E
Sbjct: 646 LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMI--- 702
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLE 545
G + PDE Y +++
Sbjct: 703 ----------GKGVLPDEVVYMCLIK 718
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 85/213 (39%), Gaps = 16/213 (7%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
QA L + + D + + Y L+ L K+G EA+ F M E L P++A Y
Sbjct: 550 QATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSE-IGLQPNVAVY 608
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ L + + KL + M K + PD + Y A+++ +
Sbjct: 609 TALVDGLCKNNCFEVAKKLFDEMLDKG---------------MMPDKIAYTALIDGNMKH 653
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + ++ + G++ Y + + SG+ +M G + Y
Sbjct: 654 GNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVY 713
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
L++ ++ GK++EA+ M +RG++ S
Sbjct: 714 MCLIKKYYALGKVDEALELQNEMAKRGMITGLS 746
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 188/453 (41%), Gaps = 46/453 (10%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+R L+D L K K + M G L+ L +G ++A
Sbjct: 97 FRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAF 156
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN--LMLEDCNLYPDIAAYH 268
S+L+ + +L + ++ L K G A R+ + M+E L PD+ ++
Sbjct: 157 SLLEQMAANGCPPEL---ITFGLIIKGLCKEGEIEAAFRVVDEMFMIES-GLSPDVITFN 212
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH---RKNWDPVLEPDLVVYNAVLNACV 325
SV GL KE +RI + H ++ + P++V Y+ +++
Sbjct: 213 SVLD-----GLCKE-------------QRILDAHNVFKRALERGCRPNVVTYSTLIDGLS 254
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ + ++ + G + + TY ++ +L+ G+ + R+M +G A+
Sbjct: 255 KMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAV 314
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY L+ F++ ++ EAV +R M + G + Y L LC +GR+ +A+ +++ +
Sbjct: 315 TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM 374
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRND 503
+ R P IT++ ++ G + + + F+ M + P++ +A++ +
Sbjct: 375 AA-RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG 433
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+A E E RA PD T+S ++ A + + +++GM
Sbjct: 434 KIDEAYEFLERMIRAGRI-------------PDVVTFSILINGLCDAGRIDTGLELFRGM 480
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
A GC D +A L+ RA + ++ AFD
Sbjct: 481 AERGCVPDMVTYATLVDRLCRASR---VDEAFD 510
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 171/402 (42%), Gaps = 25/402 (6%)
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ ++ D + PD+V Y A+++ + K + +F++ R G P+ TY ++ +
Sbjct: 16 TLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGL 75
Query: 360 LQSGKYDLVHEFFRKMA-KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ G+ + + MA G +TY L+ + ++++ + M RG
Sbjct: 76 CKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPN 135
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISI 477
A Y L L GR ++A ++E++ + + P E+ GLII + G I+ +
Sbjct: 136 AVTYNTLVNALLGQGRSKEAFSLLEQMAA--NGCPPELITFGLIIKGLCKEGEIEAAFRV 193
Query: 478 FQHM---KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
M + P++ T N++L + A +F+ RA G +
Sbjct: 194 VDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFK---RALERG----------CR 240
Query: 535 PDEYTYSSMLEA-SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
P+ TYS++++ S A E + + K + L GC+ + ++ ++ + G+
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL-GCRANTVTYSTVVDGLLKVGRMEDAVV 299
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNE 653
+ +AG +P + + ++ + +AV L+ M A FH + +T L
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 359
Query: 654 DRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
D+ ++L+ + A + IT S++ + LC++ +
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSI---VDGLCKAGR 398
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 122/301 (40%), Gaps = 20/301 (6%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+ R L+D LS+ + + + M + G ++ GL G
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A+ VL ++D L Y L+ K R EA+ + MLE +P + Y
Sbjct: 296 DAVVVLRQ---MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE-AGFHPSVVTY 351
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVP 326
++ L + G E V++++ M + P+ + Y+++++ C
Sbjct: 352 TTLCHGLCRSGRFDEAVEILDYMAARGCA---------------PNAITYSSIVDGLCKA 396
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + + K R + P Y ++ + ++GK D +EF +M ++G +T
Sbjct: 397 GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVT 456
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
+ +L+ + G+I+ + R M +RG V Y L LC R +A + ++++
Sbjct: 457 FSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMR 516
Query: 447 S 447
S
Sbjct: 517 S 517
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 95/478 (19%), Positives = 182/478 (38%), Gaps = 94/478 (19%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---P 294
L K+ + +A+ +F M+ D +YPD+ Y ++ LG+ +KE L E R K P
Sbjct: 5 LCKSRKVDKAITLFKQMV-DKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHP 63
Query: 295 S--------------KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQWKGVFWV 336
+ RI+N D + P +V Y+ +++ H+ +
Sbjct: 64 TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
+++ G P+A TY + +L G+ +MA +G +T+ ++++ +
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183
Query: 397 EGKINEAVAAVRN--MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
EG+I A V M + G+ + + LC R DA V ++ R +P
Sbjct: 184 EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE-RGCRPN 242
Query: 455 EITFTGLI--ISSM-----------------------------DG----GHIDDCISIFQ 479
+T++ LI +S M DG G ++D + + +
Sbjct: 243 VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 302
Query: 480 HMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M+D C P+ T N ++ + + +A L E A P
Sbjct: 303 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG-------------FHPSVV 349
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC---------- 588
TY+++ + +++ + MA GC + ++ ++ +AG+
Sbjct: 350 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 409
Query: 589 --------HLLEHA--FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
H++ ++ D L +AG+I F E +I+A + LIN + A
Sbjct: 410 ARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 467
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 15/189 (7%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S YT L L ++GR EA+ I + M P+ Y S+ L + G + E +
Sbjct: 347 SVVTYTTLCHGLCRSGRFDEAVEILDYMAAR-GCAPNAITYSSIVDGLCKAGRVTEALGY 405
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E+M + D V+ P ++ Y+A+++ + + + +++ ++G
Sbjct: 406 FEKMAR--------------DEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRI 451
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P T+ + + + +G+ D E FR MA+ G +TY LV +++EA
Sbjct: 452 PDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDL 511
Query: 407 VRNMEQRGV 415
+ M G+
Sbjct: 512 FQQMRSDGL 520
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 163/385 (42%), Gaps = 44/385 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
VYT ++ I+G+ G +A +F M L D ++ ++ ++ G+ G + + L+
Sbjct: 76 VYTIMIGIMGREGMLDKASELFEDMPLNDVEW--NVYSFTALINAYGRNGQHEASLHLLA 133
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKP 347
RM+++ + P+L+ YN V+NAC +W+G+ +F Q+R G++P
Sbjct: 134 RMKREK---------------VTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQP 178
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + G + FR M ++G ++TY LV + + + +
Sbjct: 179 DIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELL 238
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
R MEQ G Y L G+++ A + ++++ P +TF+ L+ +
Sbjct: 239 REMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQE-AGCTPDVVTFSTLLEAYGK 297
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF-------EETTRAN 519
G D+ +F MK+ EP++ T N +++V+ + F ++ LF E +
Sbjct: 298 HGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMST 357
Query: 520 SSGYTFLSGDGAPLK---------------PDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
+G + G G K P ++ ++ A A + Y + M
Sbjct: 358 YAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMK 417
Query: 565 LSGCQLD-QTKHAWLLVEASRAGKC 588
SGC+ D +T +A + A C
Sbjct: 418 ESGCKPDLETYNALIGAHAGGGLYC 442
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 148/369 (40%), Gaps = 30/369 (8%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K ++ + Y ++ K G E L + + PDI Y+++ G
Sbjct: 135 MKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRG 194
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L++E + M + + PD + YNA+++ + + +GV + +
Sbjct: 195 LVEEAGMVFRTMNEAG---------------VVPDSITYNALVDIYGQADRHEGVGELLR 239
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
++ ++G P Y + +E ++GKY + F++M ++G +T+ L+ A+ + G
Sbjct: 240 EMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHG 299
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+E +M++RG + Y L G +Q+++ + + +P T+
Sbjct: 300 CYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLD-GGVEPDMSTY 358
Query: 459 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
GL+ S GG I +HM + + P ++ Y ++S+A
Sbjct: 359 AGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEAT-------- 410
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
Y F S + KPD TY++++ A A + Y M G D + +
Sbjct: 411 -----YAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNS 465
Query: 578 LLVEASRAG 586
L+ R G
Sbjct: 466 LIEAFGRGG 474
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 103/269 (38%), Gaps = 18/269 (6%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ + G+ G E++ +F +L D + PD++ Y + + G+ GL
Sbjct: 322 TYNTLIQVFGQGGFFQESINLFWDLL-DGGVEPDMSTYAGLLYSCGKGGL---------- 370
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
K K +HR + P + ++ A + + + F +++SG KP
Sbjct: 371 -----HKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDL 425
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + G Y + M G + TY L+ AF G ++A+ R+
Sbjct: 426 ETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRD 485
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME+ Y L C G + +A ++ + P ++ L+
Sbjct: 486 MEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQ-VGGELPSVDSYCLLLSVCARRN 544
Query: 470 HIDDCISIFQHMKDHCEPNI-GTVNAMLK 497
DD + + M + P+I G V +LK
Sbjct: 545 RWDDASKVLEEMLEPNMPSIYGVVGGILK 573
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 118/298 (39%), Gaps = 20/298 (6%)
Query: 330 WKGVFWVFKQL-RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
W+ +FK + R KP+ Y + + +M + G D E F M + ++
Sbjct: 54 WQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFT 113
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ A+ G+ ++ + M++ V Y + G + +L + +
Sbjct: 114 ALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGL--FAQM 171
Query: 449 RHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 505
RH +P IT+ L+ + G +++ +F+ M + P+ T NA++ +Y + D
Sbjct: 172 RHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRH 231
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
EL E +A ++ PD Y+ ++EA A ++ ++K M
Sbjct: 232 EGVGELLREMEQAGNA-------------PDVVAYNILIEAYGRAGKYRAAAKMFKQMQE 278
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
+GC D + LL + G + F + E G P + LIQ Q +
Sbjct: 279 AGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYN-TLIQVFGQGGF 335
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 155/386 (40%), Gaps = 31/386 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL+ G EA +F M D + PD+ Y + T G++ L+++ L+
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGE 307
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M S PD+ YN +L A S K VF Q++ +G P+A
Sbjct: 308 MASGGSL---------------PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + QSG+YD V + F +M S A TY +L+ F E G E V +
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + + Y + G +DA +++ + + P +TG+I +
Sbjct: 413 MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA-NDIVPSSKAYTGVIEAFGQAA 471
Query: 470 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
++ + F M + P+I T +++L ++R + +++ + L
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR-----------LVD 520
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
G P D T+++ +EA ++E Y M S C D+ +L S A
Sbjct: 521 SGIPRNRD--TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLV 578
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEML 614
F+ + + +P + + ML
Sbjct: 579 DECREQFEEMKASDILPSIMCYCMML 604
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 191/473 (40%), Gaps = 77/473 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++++LG+ G + L +F+
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFD 165
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + + +Y ++ G+ G + ++L++RM+ + + P
Sbjct: 166 EMPSQ-GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK---------------ISP 209
Query: 313 DLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
++ YN V+NAC W+G+ +F ++R G++P TY + G D
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 269
Query: 372 FRKMAKSG------------EAIGAL-----------------------TYKVLVRAFWE 396
FR M G E G L +Y VL+ A+ +
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK 329
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G I EA+ M+ G A+ Y L +GR+ D + ++KS ++ P
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS-SNTDPDAA 388
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ LI +GG+ + +++F M +++ EP++ T ++ + + A+++ +
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
T AN + P Y+ ++EA A +E + M G
Sbjct: 449 T-AND------------IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAV 627
LL +R G E L+++G IP I+A Q +E+AV
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSG-IPRNRDTFNAQIEAYKQGGKFEEAV 547
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 148/376 (39%), Gaps = 33/376 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ GS ++AM V + ++ + Y+ LL + G++GR + ++F L +
Sbjct: 323 LLEAYAKSGSIKEAMGVF---HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF-LEM 378
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N PD A Y+ + G+ G KE+V L M ++ +EPD+
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN---------------IEPDME 423
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++ AC + + + + + + PS+ Y +E Q+ Y+ F M
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G T+ L+ +F G + E+ A + + G+ + G++
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
++A+ ++ R P E T ++ +D+C F+ MK P+I
Sbjct: 544 EEAVKTYVDMEKSR-CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
ML VY + + + EL EE S + G + +Y S W+
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQ---MIKGDYDDDS---------NWQ 650
Query: 555 YFEYVYKGMALSGCQL 570
EYV + GC L
Sbjct: 651 IVEYVLDKLNSEGCGL 666
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 34/245 (13%)
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
A V+ E A G WQ ++ + + ++ KP E +T +I G +D C+ +F
Sbjct: 109 ALVFKEFA----GRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF 164
Query: 479 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE-------------TTRANSSGYT 524
M ++ + A++ Y RN + + EL + T N+
Sbjct: 165 DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG 224
Query: 525 FLSGDG----------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
L +G ++PD TY+++L A A + E V++ M G D T
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
++ L+ GK LE D L E G +P + +L + ++A+ + +
Sbjct: 285 YSHLV---ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 632 AMAYA 636
M A
Sbjct: 342 QMQAA 346
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 148/350 (42%), Gaps = 35/350 (10%)
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPS------------KRIK---- 299
+L PD+ Y ++ L +V + +++++ M R PS KR K
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351
Query: 300 -NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
N+ ++ D + P+L VYNA++++ ++ +F ++ K GL+P+ TY + +++
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ GK D F +M +G + Y L+ + G I+ A + M + + T
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y L C+ G+ A+ + ++ + P TFT L+ G I D + +F
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTG-KGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 479 QHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
M + + +PN T N M++ Y SKA E +E T + PD
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG-------------IVPDT 577
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
Y+Y ++ Q + G+ C+L++ + LL R GK
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 94/478 (19%), Positives = 186/478 (38%), Gaps = 38/478 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D R F+ M +GL + L+ G G A ++ +
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG---FMAEM 463
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+K+ + YT L+ G+ ++ALR+++ M + P I + ++ L + GL
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGL 522
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+++ VKL M + W+ ++P+ V YN ++ F K+
Sbjct: 523 IRDAVKLFNEMAE-------------WN--VKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + G+ P +Y + + +G+ F + K + + Y L+ F EGK
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL--RHSKPLEIT 457
+ EA++ + M QRGV Y L + + + +D L +K + R KP ++
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVL---IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 458 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+T +I + G + I+ M + C PN T A++ + ++A+ L +
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
+S P++ TY L+ L G + +
Sbjct: 745 PVSSV-------------PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYN 791
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L+ R G+ ++ G P + +T M+ + +++ +KA+ L N+M
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 86/437 (19%), Positives = 172/437 (39%), Gaps = 49/437 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G KG +A+ + + G K S + +T LL+ L +AG +A+++FN M
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTG---KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP------SKR------------ 297
E N+ P+ Y+ + + G + + + ++ M +K S R
Sbjct: 535 E-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 298 ------IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ +H+ N E + + Y +L+ + + V +++ + G+
Sbjct: 594 SEAKVFVDGLHKGNC----ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
YG+ ++ L+ L ++M G + Y ++ A + G EA M
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
G V Y + LC G +A ++ K++ + S P ++T+ G + + G +
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPV-SSVPNQVTY-GCFLDILTKGEV 767
Query: 472 D--DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
D + + + N T N +++ + R +A EL T + GD
Sbjct: 768 DMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELI-----------TRMIGD 816
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
G + PD TY++M+ + + ++ M G + D+ + L+ AG+
Sbjct: 817 G--VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 590 LLEHAFDSLLEAGEIPH 606
+ +L G IP+
Sbjct: 875 KATELRNEMLRQGLIPN 891
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 101/237 (42%), Gaps = 15/237 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P++ +A+L+ V + +F + G++P Y + + +
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E M +G + + Y VL+ ++ K+ EAV +++ + + Y L L
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C ++ + +++++ LR S P E + L+ G I++ +++ + + D PN
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFS-PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN 366
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+ NA++ + F +A+ LF+ + L+P++ TYS +++
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIG-------------LRPNDVTYSILID 410
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 189/461 (40%), Gaps = 42/461 (9%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A++V+ L R L V + + +AG EA I + PD +AY
Sbjct: 134 AVAVVRAARDLHGDRALHHPRVLPTAIRVFARAGCLAEASAIL-----EAAPAPDASAYT 188
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA----C 324
++ + G ++ V + +RM D ++P LV YN V +A
Sbjct: 189 ALVSAFSRAGRFRDAVAVFQRM---------------VDGGVQPALVTYNVVFHAYSKMS 233
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
VP WK V + +++ G++ TY + + G + + F +M +G
Sbjct: 234 VP---WKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDK 290
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+T+ L+ + + K EA+ ++ ME G + Y L +G ++A+ + ++
Sbjct: 291 VTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQE 350
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRND 503
++ R KP +T+T LI G ID ++ + M ++ C PN+ T NA++K++
Sbjct: 351 ME-FRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRG 409
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
F++ +F++ S+GY PD T++++L V+K M
Sbjct: 410 KFTEMMAVFDDL---RSAGYV----------PDVVTWNTLLSVFGQNGLDSEVSGVFKEM 456
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
+G ++ + L+ SR G + ++EAG P + +L +
Sbjct: 457 KKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRW 516
Query: 624 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 664
E+A L M E ++ L + + DK++ L
Sbjct: 517 EQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTL 557
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 179/448 (39%), Gaps = 85/448 (18%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
+G R+A V D + + D + + LL + GKA + EA+ + M E+ P
Sbjct: 268 RGLHREAAQVFDEMKAAGFEPD---KVTFNSLLDVYGKARKHEEAIGVLKRM-ENAGCTP 323
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMR---QKPSKRIKNMHRKNWDPV--LEPDLVVY 317
+ Y+S+ + GLL+E ++L + M KP D V ++ L Y
Sbjct: 324 SVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATY 383
Query: 318 N-AVLNACVPS----------HQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQS 362
+ V N C P+ H +G F VF LR +G P T+ + V Q+
Sbjct: 384 SEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQN 443
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G V F++M K+G TY L+ ++ G ++A+ + M + G+ S Y
Sbjct: 444 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTY 503
Query: 423 YELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI---- 477
+ L GRW+ A L E + R KP E++++ L+ + + +D ++
Sbjct: 504 NAVLSALARGGRWEQAEKLFAEMVD--RDCKPDELSYSSLLHAYANAKKLDKMKTLSEDI 561
Query: 478 -------------------------------FQHM-KDHCEPNIGTVNAMLKVYSRNDMF 505
FQ + + C +I +NAM+ +Y +N M
Sbjct: 562 YAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMV 621
Query: 506 SKAKE----LFEETTRANSSGYTFLS------GD------------GAPLKPDEYTYSSM 543
K +E + E + +++ Y L GD + ++PD Y+Y+++
Sbjct: 622 KKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTV 681
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLD 571
+ A Q + ++ M SG + D
Sbjct: 682 IYAYGRKGQMKEASRLFSEMKCSGVKPD 709
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 151/402 (37%), Gaps = 52/402 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M+V D L+ + + LL++ G+ G E +F M
Sbjct: 401 LIKLHGVRGKFTEMMAVFD---DLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEM- 456
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL + +++ +RM + + PD+
Sbjct: 457 KKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRM---------------IEAGIYPDIS 501
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNAVL+A +W+ +F ++ KP +Y + + K D KM
Sbjct: 502 TYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLD-------KM 554
Query: 376 AKSGEAIGA-------LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
E I A K LV + + E A + + +R +V +
Sbjct: 555 KTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSI 614
Query: 429 LCNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 485
N + V+ + S+ HS T+ L+ G + C SI +K
Sbjct: 615 YGKNKMVKKVEEVLSLMMENSINHSA---ATYNSLMHMYSRLGDCEKCESILTEIKSSGM 671
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
P+ + N ++ Y R +A LF E SG +KPD TY+ ++
Sbjct: 672 RPDRYSYNTVIYAYGRKGQMKEASRLFSEM---KCSG----------VKPDIVTYNIFIK 718
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ +E + + + GC+ ++ +L SR G+
Sbjct: 719 SYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGR 760
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 136/354 (38%), Gaps = 63/354 (17%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M ++G + + L+ G + QAM + + D+ + Y +L+ L +
Sbjct: 456 MKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDIST---YNAVLSALAR 512
Query: 241 AGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR-- 297
GR +A ++F M++ DC PD +Y S+ L ++ L E + + +R
Sbjct: 513 GGRWEQAEKLFAEMVDRDCK--PDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHN 570
Query: 298 --IKNM----HRKNWDPVLEP------------DLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+K + ++ N P E D+ V NA+++ + K V V
Sbjct: 571 WLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSL 630
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ ++ + SAATY M + + G + ++ SG +Y ++ A+ +G+
Sbjct: 631 MMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQ 690
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ EA M+ GV KP +T+
Sbjct: 691 MKEASRLFSEMKCSGV------------------------------------KPDIVTYN 714
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
I S + ++ I + +++ C PN T N++L+ YSR+ +AK
Sbjct: 715 IFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFL 768
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 49/103 (47%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN V+ A Q K +F +++ SG+KP TY + ++ + + ++
Sbjct: 671 MRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAI 730
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ R + G T+ +++ + G++ EA + + N+ +
Sbjct: 731 DLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLPK 773
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/540 (21%), Positives = 217/540 (40%), Gaps = 102/540 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L+ L +G +A+++ D L+ ++ Y+ L+ L K R AL + + M
Sbjct: 164 VLRSLCARGDLDRAVTLFD---SLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMP 220
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD+ Y+++ + G ++++++ +++ + P R P+L
Sbjct: 221 RS-GVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGAR--------------PNLA 265
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+ ++K V V++++ + L+P TYG+ + + +SG D + ++
Sbjct: 266 TYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEI 325
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEA--------VAAVRNME----------QRGVVG 417
K+G I A Y LV+ F + G++ EA A +RN+ G+V
Sbjct: 326 IKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVD 385
Query: 418 TASVYYEL-----ACC------------LCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFT 459
A ++L AC LC NG A + E+ + K L++ +++
Sbjct: 386 EAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARV--SGKQLDVFSYS 443
Query: 460 GLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML----KVYSRNDMFSKAKELFEE 514
+I + G + D + +++ M KD C+PN NA++ +VY +D ++ +
Sbjct: 444 SMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADN 503
Query: 515 TTRANSSGYTFLSGDGA-------------------PLKPDEYTYSSMLEASATAHQWEY 555
Y L DG PD TY S++ + + +
Sbjct: 504 GCSPTVITYNTLI-DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDD 562
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
++K + G ++D H L+ AGK H F + E P L L+
Sbjct: 563 ALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLM 622
Query: 616 QAIVQSNY-EKAVALINAMAYAPFHITERQWTELFESN--EDRISRDKLEKLLNALCNCN 672
+ ++ Y +KA L WT + E D IS + K LC+C+
Sbjct: 623 DGLYETGYIDKAATL---------------WTSITEDGLEPDIISYNTRIK---GLCSCD 664
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 149/324 (45%), Gaps = 25/324 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KGL D G +A+ + D + KD + + L+ L + G ++A IF
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLE--KDVACIPDTVTFGTLIHGLCQNGFANKAFTIF---- 427
Query: 256 EDCNLYP---DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
E+ + D+ +Y S+ L VG L + VK+ E+M + K P
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK---------------P 472
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+ +YNA+++ ++ ++ ++ +G P+ TY ++ + ++ KY
Sbjct: 473 NSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVA 532
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R+M ++G TY L+R + + KI++A++ + + +G+ ++ L LC+
Sbjct: 533 REMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSA 592
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
G+ +A+ V +K ++ P +T+ L+ + G+ID +++ + +D EP+I +
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652
Query: 492 VNAMLKVYSRNDMFSKAKELFEET 515
N +K D + +L +E
Sbjct: 653 YNTRIKGLCSCDRIHEGIQLLDEV 676
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 8/176 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P+L YN VL + +F LR+ + P TY M + + + D
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHAL 213
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA----VRNMEQRGVVGTASVYYEL 425
+ +M +SG + Y L+ ++ G+ + + V++ R + T +V +
Sbjct: 214 DLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD- 272
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
LC GR+++ V E++ + + +P IT+ LI G +D ++ +
Sbjct: 273 --GLCKFGRFKEVGEVWERMVA-NNLQPDVITYGILIHGLCRSGDVDGAARVYSEI 325
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 146/360 (40%), Gaps = 64/360 (17%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F Y LL L KA + H+A IF+ M+ + ++ PD+ +Y ++ + + EL
Sbjct: 120 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSY---SILIDGFCKIDEL--- 173
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
R + ++++ D P++ YNA LN + + V++++ +G
Sbjct: 174 ---------GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCS 224
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P TY + + K+D HE F M G A+TY L+ +E K +EA
Sbjct: 225 PDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 284
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH---------------- 450
R M +RG Y L CN G+ + A+ V +++ S H
Sbjct: 285 FRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFR 344
Query: 451 ------------------SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDH-CEPNIG 490
KP ++ +I +DD + +F+ M +DH C P++
Sbjct: 345 AGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLV 404
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N+++ S+A ++F+E R L PD + ++ +LEA A
Sbjct: 405 TYNSLIFGLCGEQRLSEAMKVFKEIDRLK-------------LSPDPHAFNVLLEAMYAA 451
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 148/382 (38%), Gaps = 23/382 (6%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV---MLQSGKYDLVHEF 371
V + A L S + + F + +++S + G V + ++G+ D
Sbjct: 12 VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV--YYELACCL 429
M K G T+ +L+ + KI EA ++ M + +S Y L L
Sbjct: 72 LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSL 131
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C + A + + S R P ++++ LI + +++ M D +C PN
Sbjct: 132 CKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 191
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T NA L R + A+ ++EE A S PD TYS+++ +
Sbjct: 192 VTTYNAFLNGLMRKGRIADAQGVYEEMISAGCS-------------PDVITYSTLIHGFS 238
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A + + +++ M GC+ + + LL + K F ++E G P +
Sbjct: 239 LARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKV 298
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFESNEDRISRDKLEKL 664
+T +L E+AV + + M + P + + F + + +R + +
Sbjct: 299 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVM 358
Query: 665 LNALCNCNAASSEITVSNLSRA 686
++ C + S I + LS+A
Sbjct: 359 VSRECKPDTVSHNIMIDGLSKA 380
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 20/216 (9%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+ R A L+ L + + + R M + G + LL G + G Q
Sbjct: 256 RGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQ 315
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAY 267
A+ V D + D+ Y LL +AG+P EA ++F +M+ +C PD ++
Sbjct: 316 AVEVFDEMVSKGHDPDV---VAYNCLLKGFFRAGKPGEARQLFQVMVSRECK--PDTVSH 370
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ + L + L + V++ ERM Q D PDLV YN+++
Sbjct: 371 NIMIDGLSKAKRLDDAVEVFERMEQ--------------DHGCSPDLVTYNSLIFGLCGE 416
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
+ VFK++ + L P + + +E M +G
Sbjct: 417 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/560 (20%), Positives = 224/560 (40%), Gaps = 67/560 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+LK L D G A+++ + + +R Y L+ L K G +AL++F+ ML
Sbjct: 178 ILKALVDSGVILLALALYNRMVAAGCA---PNRATYNVLMDGLCKQGMAGDALKMFDEML 234
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D + P++ Y + +L G + E V+L+ M+ K PD V
Sbjct: 235 -DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL---------------PDEV 278
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNA L+ + F L+ G Y ++ + Q+ ++D +++ M
Sbjct: 279 TYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ + + Y +++R E G+I +A++ + M+++G V Y + LC++G
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVN 493
+ A + ++ L+++ L+ T ++I + G +D+ + IF M +H C+P + T N
Sbjct: 399 ERAHTLRSEM--LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYN 456
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTF---------------------LSGDGAP 532
A++ + R +A+ LF + N+ + G
Sbjct: 457 ALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQV 516
Query: 533 LK--------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
LK PD TY++++ A + ++K + L G D+ + L
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
+ RA + + F ++L++G P + M+ +A+ L + Y P
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL--WLDYLPK 634
Query: 639 HITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
+E+ + I L+ + L + I+ + + L LC+ + D
Sbjct: 635 KYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDD 694
Query: 699 LSSSAH----FGSQAIDISP 714
H FG IDI+P
Sbjct: 695 ALRIFHTLQEFG---IDITP 711
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 164/428 (38%), Gaps = 59/428 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D L ++ M K M G+M LL L + G +A+ +L +
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLG---SM 268
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
KDK L Y L+ L K GR +EA + +ML+D + Y + L Q
Sbjct: 269 KDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL-VMLQDGGFALGLKGYSCLIDGLFQA-- 325
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
R + K M +N + PD+V+Y ++ C + + +
Sbjct: 326 ---------RRFDEGFGYYKTMLERN----ISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++K G P Y ++V+ G + H +M ++ + + T +++ + G
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
++EA+ M + G T Y L GR ++A ++ K++ + ++ L + T
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFLRLT 491
Query: 460 GLIISSMDGGHIDDCISIFQHMKDHCE--------------------PNIGTVNAMLKVY 499
+ + D S+ + + D C+ P++ T N ++
Sbjct: 492 ------LGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGL 545
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
+ A LF+E L G + PDE TY ++++ AH+ +
Sbjct: 546 CKARNLDGAVRLFKELQ---------LKG----ISPDEITYGTLIDGLLRAHRENDAMML 592
Query: 560 YKGMALSG 567
++ + SG
Sbjct: 593 FQNILQSG 600
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 94/243 (38%), Gaps = 35/243 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P VYN +L A V S ++ ++ +G P+ ATY + M+ + + G +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M G Y VL+ + GKI+EAV + +M+ +G + Y LC
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289
Query: 432 NGRWQDAM--LVVEK--------------IKSL------------------RHSKPLEIT 457
GR +A LV+ + I L R+ P +
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+T +I + G I+D +S MK P+ N +LKV + +A L E
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409
Query: 517 RAN 519
+ N
Sbjct: 410 QNN 412
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 122/312 (39%), Gaps = 19/312 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ SH + +F R +GL S++ + + +G++ + F +M + A
Sbjct: 113 LSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTA 172
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
Y +++A + G I A+A M G + Y L LC G DA+ + ++
Sbjct: 173 FVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDE 232
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 503
+ R P +T L+ S + G ID+ + + MKD C P+ T NA L +
Sbjct: 233 MLD-RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK-- 289
Query: 504 MFSKAKELFEETTRANSSGYTF-LSGDGAPLKPDEYTYSSMLEASATAHQW-EYFEYVYK 561
+ E F+ G+ L G YS +++ A ++ E F Y YK
Sbjct: 290 -VGRVNEAFQRLVMLQDGGFALGLKG-----------YSCLIDGLFQARRFDEGFGY-YK 336
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
M D + ++ + AG+ D + + G +P + +L
Sbjct: 337 TMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHG 396
Query: 622 NYEKAVALINAM 633
+ E+A L + M
Sbjct: 397 DLERAHTLRSEM 408
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 16/229 (6%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAIL 238
M Q+ L+ ++ GL +G +AM + D + +G + Y L+
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD-----PTVMTYNALIDGF 462
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG--QVGLLKELVKLIERMRQKPSK 296
+ GR EA +F+ M N P + + +TLG QV + L KL+ M Q
Sbjct: 463 YREGRLEEARMLFHKMEMGNN--PSLF----LRLTLGANQVRDSESLRKLVHDMCQSGQV 516
Query: 297 -RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + R D + PD+V YN ++N + G +FK+L+ G+ P TYG
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
++ +L++ + + F+ + +SG + Y ++R+ K+++A+
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAI 625
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 12/266 (4%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
F+ +M + G + +LK L D G +A ++ + L++ L S T ++
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM--LQNNLVLDST-TQTIMIC 425
Query: 237 ILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR--QK 293
L K G EA++IF+ M E C+ P + Y+++ + G L+E L +M
Sbjct: 426 GLCKRGLVDEAMQIFDEMGEHGCD--PTVMTYNALIDGFYREGRLEEARMLFHKMEMGNN 483
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
PS ++ N + + V + C S Q + + + + SG+ P TY
Sbjct: 484 PSLFLRLTLGANQ---VRDSESLRKLVHDMC-QSGQVLKAYKLLRSIIDSGVVPDVVTYN 539
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + ++ D F+++ G + +TY L+ + N+A+ +N+ Q
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQS 599
Query: 414 GVVGTASVYYELACCLCNNGRWQDAM 439
G + S+Y + LC + A+
Sbjct: 600 GSSPSLSIYNSMMRSLCRMKKLSQAI 625
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 33/352 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT L+ K G A R+F+ M + + PD Y +V L Q G + E KL
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHE 418
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K LEPD V Y A+++ + K F + Q+ + GL P+
Sbjct: 419 MVCKR---------------LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 463
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + G+ D +E +M + G + TY LV + G I++AV +++
Sbjct: 464 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 523
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME G A Y L C + A ++ ++ R +P +TF L+ G
Sbjct: 524 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD-RELQPTVVTFNVLMNGFCMSG 582
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS-RNDMFSKAKELFEETTRANSSGYTFLS 527
++D + + M + PN T N+++K Y RN+M RA + Y +
Sbjct: 583 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM------------RATTEIYRGMC 630
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
G + PD TY+ +++ A + ++++ M G L + + L+
Sbjct: 631 AKG--VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 680
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 156/386 (40%), Gaps = 65/386 (16%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLML--------EDCNLY-------------------- 261
V+ +L +AG EA ++F+ ML + CNL+
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVE 243
Query: 262 -PDI------AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
P++ A+Y+ + +L Q+G + E +L+ +M + PD+
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI---------------PDV 288
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ Y+ V+N + + V + ++++ GLKP+ TY + ++ ++GK R+
Sbjct: 289 ISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G A + Y L+ F + G ++ A M++R + Y + C LC GR
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVN 493
+A + ++ R +P E+T+T LI G + + S+ Q ++ PNI T
Sbjct: 409 VMEADKLFHEMVCKR-LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYT 467
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A+ + A EL E R L+ + YTY+S++ A
Sbjct: 468 ALADGLCKCGEVDTANELLHEMCRKG-------------LELNIYTYNSLVNGLCKAGNI 514
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLL 579
+ + K M ++G D + L+
Sbjct: 515 DQAVKLMKDMEVAGFHPDAVTYTTLM 540
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 22/290 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K G+ EA + N ML+ L P+I Y ++A L + G + +L+ M
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQ-MGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+K LE ++ YN+++N + + K + +G P A
Sbjct: 490 CRKG---------------LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 534
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY M+ +S + HE R+M +T+ VL+ F G + + ++ M
Sbjct: 535 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 594
Query: 411 EQRGVVGTASVYYELA--CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
++G++ A+ Y L C+ NN R A + + + P T+ LI
Sbjct: 595 LEKGIMPNATTYNSLIKQYCIRNNMR---ATTEIYRGMCAKGVVPDGNTYNILIKGHCKA 651
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
++ + + + M + + NA++K + + F +A+ELFE+ R
Sbjct: 652 RNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 701
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 16/197 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ L KAG +A+++ M E +PD Y ++ + +E+V+ E
Sbjct: 499 YTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAVTYTTLMDAYCKS---REMVRAHE 554
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+RQ D L+P +V +N ++N S + + K + + G+ P+
Sbjct: 555 LLRQM------------LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 602
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A TY ++ E +R M G TY +L++ + + EA R
Sbjct: 603 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 662
Query: 409 NMEQRGVVGTASVYYEL 425
+M +G T S Y L
Sbjct: 663 DMVGKGFNLTVSSYNAL 679
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 162/402 (40%), Gaps = 31/402 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y+ LL + + AL + M++ PDI S+ + E V L++
Sbjct: 117 YTYSILLNCFCRRSQLPLALAVLGKMMK-LGYEPDIVTLSSLLNGYCHGKRISEAVALVD 175
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M + K PD V +N +++ ++ + ++ G +P
Sbjct: 176 QMVEMGYK---------------PDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD 220
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TYG + + + G DL +KM K + Y ++ + +++A
Sbjct: 221 LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFN 280
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
ME +G+ Y L CLCN GRW DA ++ + R P +TF LI +
Sbjct: 281 KMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE-RKINPNVVTFNSLIDAFAKE 339
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G + + +F M + +PNI T N+++ + +D +A+++F +
Sbjct: 340 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC------- 392
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
PD TY+++++ A + E +++ M+ G + + L+ +AG
Sbjct: 393 ------LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
C + + F ++ G P + ++ +L EKA+ +
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 488
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 141/316 (44%), Gaps = 25/316 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L++ L GR +A R+ + M+E + P++ ++S+ + G L E KL +
Sbjct: 292 FTYNSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350
Query: 289 RMRQK---PSKRIKN-------MHRKNWDPVLE-----------PDLVVYNAVLNACVPS 327
M Q+ P+ N MH + D + PD+V YN ++ +
Sbjct: 351 EMIQRSIDPNIVTYNSLINGFCMHDR-LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKA 409
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + +F+++ + GL + TY ++ + Q+G D+ + F+KM G +TY
Sbjct: 410 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 469
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+L+ + GK+ +A+ +++ + Y + +C G+ +D + + S
Sbjct: 470 SILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSL-S 528
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFS 506
L+ KP I +T +I G ++ ++F+ MK D P+ G N +++ R+ +
Sbjct: 529 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKA 588
Query: 507 KAKELFEETTRANSSG 522
+ EL +E G
Sbjct: 589 ASAELIKEMRSCGFVG 604
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +AG A +IF M+ D + PDI Y + L + G L++ + + E +
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYL 492
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EP++ YN ++ + + + + +F L G+KP+
Sbjct: 493 QKSK---------------MEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 537
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + + G + FR+M + G + Y L+RA +G + ++ M
Sbjct: 538 IYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 597
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAML 440
G VG AS + + ++GR + + L
Sbjct: 598 RSCGFVGDAST-ISMVINMLHDGRLEKSYL 626
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 118/302 (39%), Gaps = 24/302 (7%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F ++ KS PS + + + + K+D+V +M G TY +L+ F
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFC 127
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
++ A+A + M + G L C+ R +A+ +V+++ + + KP
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGY-KPDT 186
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT----VNAMLKVYSRNDMFSKAKE 510
+TF LI + +++ M C+P++ T VN + K + S K+
Sbjct: 187 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 246
Query: 511 LFEETTRANSSGY-TFLSG-----------------DGAPLKPDEYTYSSMLEASATAHQ 552
+ + AN Y T + G + +KPD +TY+S++ +
Sbjct: 247 MEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGR 306
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
W + M + L+ ++ GK E FD +++ P+ + +
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 366
Query: 613 ML 614
++
Sbjct: 367 LI 368
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 198/492 (40%), Gaps = 43/492 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A L+ L + T+ V R M + G + LLKGL D+
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRS 179
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + Y +L K G +A ++ ML D + PD+
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEML-DRGILPDVVT 238
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ L + + + ++++ M +KN + PD + YN++L+
Sbjct: 239 YSSIIAALCKAQAMDKAMEVLNTM-------VKNG--------VMPDCMTYNSILHGYCS 283
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
S Q K K++R G++P+ TY M + ++G+ + F M K G T
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 343
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y+ L++ + +G + E A + M + G+ V+ L C + AMLV K++
Sbjct: 344 YRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403
Query: 447 SLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 504
+H + G +I + G +DD + F+ M D PNI +++ D
Sbjct: 404 --QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 505 FSKAKEL-FEETTRANSSGYTFLSG-------DG--------------APLKPDEYTYSS 542
+ KA+EL E R F + +G +KPD TY++
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
+++ A + + + M G + D + L+ R + F ++ +G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 603 EIPHPLFFTEML 614
P+ + + +L
Sbjct: 582 VSPNIITYNIIL 593
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 174/423 (41%), Gaps = 40/423 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M +L G G ++A+ L ++
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK---MR 298
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ Y+ L+ L K GR EA +IF+ M + L PDIA Y ++ G L
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGAL 357
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M ++N ++PD V+N ++ A + VF ++
Sbjct: 358 VEMHALLDLM-------VRNG--------IQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R+ GL P+ YG ++V+ +SG D +F +M G + Y L+ K
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEIT 457
++A + M RG+ + + C GR ++ EK+ L KP IT
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIIT 518
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+ LI G +D+ + M +P+I T ++ Y R A LF+E
Sbjct: 519 YNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMV 578
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
SSG + P+ TY+ +L+ + + +Y + SG QL+ + +
Sbjct: 579 ---SSG----------VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625
Query: 577 WLL 579
+L
Sbjct: 626 IIL 628
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K GR E+ ++F+LM+ + PDI Y+++ G + E KL+ M K
Sbjct: 493 KEGRVIESEKLFDLMVR-IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK--- 548
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
PD+V Y ++N + +FK++ SG+ P+ TY + ++ +
Sbjct: 549 ------------PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ + E + + KSG + TY +++ + +EA+ +N+
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 120/297 (40%), Gaps = 20/297 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TY + + ++G+ DL + K G
Sbjct: 65 VARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFR 124
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+T+ L++ + + ++A+ V R M + G + Y L LC+ R Q+A+
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE 184
Query: 441 VVEKIKSLR--HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
++ + R S P +++ ++ G D S + M D P++ T ++++
Sbjct: 185 LLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA 244
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
+ KA E+ + + PD TY+S+L ++ Q +
Sbjct: 245 ALCKAQAMDKAMEVLNTMVKNG-------------VMPDCMTYNSILHGYCSSGQPKEAI 291
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
K M G + + ++ L+ + G+ FDS+ + G P + +L
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 348
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/502 (20%), Positives = 199/502 (39%), Gaps = 76/502 (15%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDI 264
+++A V D + + D + + LL + GKA EA+ + M L C P +
Sbjct: 265 YKEAAKVFDEMRAAGFEPD---KVTFNSLLDVYGKARMHDEAIGVLKEMELGGCP--PSV 319
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRK--------NWDP 308
Y+S+ + + GLLKE +L E M K + I + R +D
Sbjct: 320 VTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDE 379
Query: 309 VL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
+L +P+L YNA++ ++ + VF LR +G P T+ + V Q+G
Sbjct: 380 MLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGL 439
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
V F++M KSG TY L+ ++ G ++++ + M + G+ S Y
Sbjct: 440 DSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNA 499
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--- 481
+ L GRW+ A + ++++L +P E++++ L+ + + +D ++ + +
Sbjct: 500 VLSALARGGRWEQAEKLFAEMENL-DCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAE 558
Query: 482 ---------------------------------KDHCEPNIGTVNAMLKVYSRNDMFSKA 508
+ C +I +NAM+ VY +N M K
Sbjct: 559 KIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKV 618
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+E+ G+ + TY+S++ + E E + + SG
Sbjct: 619 EEILSLM-------------KGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGA 665
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
+ D+ + ++ R G+ F + +G IP + + + + S +E+A+
Sbjct: 666 RPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAID 725
Query: 629 LINAMAYAPFHITERQWTELFE 650
L+ M ER + + +
Sbjct: 726 LVRYMVTRGCKPNERTYNSILQ 747
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 170/387 (43%), Gaps = 34/387 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ +A R +A+ +F M+ + + P I Y+ V ++ + K++V L++
Sbjct: 181 YTALVSAFSRASRFRDAVAVFRRMVAN-GIQPAIVTYNVVLHVYSKIAVPWKDVVALVDS 239
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ + P+ D YN +++ C +K VF ++R +G +P
Sbjct: 240 MKN------------DGIPL---DRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDK 284
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ ++V ++ +D ++M G +TY L+ ++ ++G + EA
Sbjct: 285 VTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEE 344
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDG 468
ME +G+ Y L L G+ A+ +++ LR+ KP T+ LI
Sbjct: 345 MEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEM--LRNGCKPNLCTYNALIKLHGVR 402
Query: 469 GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G + +++F ++ P++ T N +L V+ +N + S+ +F+E + SGY
Sbjct: 403 GKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKK---SGYV--- 456
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
P+ TY S++ + + ++ +YK M +G D + + +L +R G+
Sbjct: 457 -------PERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGR 509
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEML 614
E F + P L ++ +L
Sbjct: 510 WEQAEKLFAEMENLDCRPDELSYSSLL 536
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 160/391 (40%), Gaps = 51/391 (13%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV------------ 358
EPD Y A+++A + +++ VF+++ +G++P+ TY + + V
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVV 234
Query: 359 -MLQSGKYDLVH-----------------------EFFRKMAKSGEAIGALTYKVLVRAF 394
++ S K D + + F +M +G +T+ L+ +
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY 294
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ +EA+ ++ ME G + Y L +G ++A + E+++ ++ +P
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEME-VKGIQPD 353
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
IT+T LI G ID I + M ++ C+PN+ T NA++K++ F + +F+
Sbjct: 354 VITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFD 413
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
+ S+G+ PD T++++L V+K M SG ++
Sbjct: 414 DL---RSAGFV----------PDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERD 460
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ L+ SR G + ++EAG P + +L +E+A L M
Sbjct: 461 TYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEM 520
Query: 634 AYAPFHITERQWTELFESNEDRISRDKLEKL 664
E ++ L + + DK++ L
Sbjct: 521 ENLDCRPDELSYSSLLHAYANAKKLDKMKAL 551
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 121/579 (20%), Positives = 228/579 (39%), Gaps = 51/579 (8%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL F E ++ G +G +A ++ LK Y LL + GK
Sbjct: 294 MRNEGLQFDEFTCSTVISACGREGLINEAK---EFFVELKSSGYEPGTVTYNALLQVFGK 350
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK------- 293
AG EAL I M ED N D Y+ + + G +E +I+ M +K
Sbjct: 351 AGIYSEALNILKEM-EDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAV 409
Query: 294 -----------PSKRIKNMHRKNW--DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
K +K + N P++ YN++L + + + + +
Sbjct: 410 TYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDM 469
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R +G P+ T+ + + GK+ V+ FR+M G G T+ L+ A+ G
Sbjct: 470 RINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSE 529
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+A M + G A+ Y L L G W+ A V+ +++ + KP E +F+
Sbjct: 530 LDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRN-KGFKPNETSFSL 588
Query: 461 LIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
++ GG++ I + + D P+ + ++ + + FEE +
Sbjct: 589 MLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMK-- 646
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+GY KPD ++SML A + +E + + + SG Q D + L+
Sbjct: 647 -NGY----------KPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLM 695
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 639
+R G+C E L+++GE P + + ++ Q ++A+ +++ M
Sbjct: 696 NMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGIC 755
Query: 640 ITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDL 699
+ R +++++++ + N +E+T + + C++ K +D
Sbjct: 756 PCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKII---VDGYCKARKYQD- 811
Query: 700 SSSAHFGSQAIDISPLHGIHEAFDVKETENVPSSSASMM 738
+ FG + ID ++FD T+ + S MM
Sbjct: 812 AMDFIFGIKNID--------DSFDNHSTQRLASHVRDMM 842
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 195/460 (42%), Gaps = 33/460 (7%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA-ILGKAGRPHEAL 248
E ++ LLK L G +A+ + +WV D+K +L+ ILG+ + AL
Sbjct: 158 EVDIVSLLKALDVLGKSERAILLFEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIAL 217
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
++ + + D D+ A ++ + G K+ + + ERM+ D
Sbjct: 218 KLLDKIPID-KYSLDVRACTTILHAYSRNGKYKQAIAMFERMK---------------DC 261
Query: 309 VLEPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
L P LV YN +L+ W + + ++R GL+ T + + G +
Sbjct: 262 GLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINE 321
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
EFF ++ SG G +TY L++ F + G +EA+ ++ ME + Y EL
Sbjct: 322 AKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVA 381
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
G +++ V++ + + + P +T+T +I + G + +F M K C
Sbjct: 382 AYVRAGFYEEGATVIDTM-TRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCV 440
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ T N++L + + S+++E+ + + + +G P P+ T++++L
Sbjct: 441 PNVCTYNSILALLGKK---SRSEEMIKILSD--------MRINGCP--PNRITWNTLLAM 487
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ ++ +V++ M G + + L+ R G +D +++AG P
Sbjct: 488 CGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPC 547
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
+ +L + +++ A +++ M F E ++
Sbjct: 548 ATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFS 587
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 144/320 (45%), Gaps = 32/320 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLI 287
+ ++ L++ G++G EA+ +FN M E L P++ Y++V G+ G+ K++ K
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKE-YGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ M++ ++PD + +N++L C W+ +F ++ ++
Sbjct: 328 DEMQRN---------------CVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQ 372
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+Y ++ + + G+ DL E +M ++Y ++ F + G+ +EA+
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M + Y L GR ++A+ ++ ++ S+ K + +T+ L+
Sbjct: 433 GEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV-VTYNALLGGYGK 491
Query: 468 GGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G D+ +F MK +H PN+ T + ++ YS+ ++ +A E+F E A
Sbjct: 492 QGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAG------- 544
Query: 527 SGDGAPLKPDEYTYSSMLEA 546
L+ D YS++++A
Sbjct: 545 ------LRADVVLYSALIDA 558
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 20/267 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G W A ++ D + + ++D+ F Y LL + K G+ A I M
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMSNRRIEQDV---FSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P++ +Y +V + G E + L MR + D V
Sbjct: 402 AK-RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLN---------------IALDRV 445
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+ + + + +++ G+K TY + + GKYD V + F +M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEM 505
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ LTY L+ + + G EA+ R + G+ +Y L LC NG
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLI 462
A+ +++++ S P +T+ +I
Sbjct: 566 GSAVSLIDEMTKEGIS-PNVVTYNSII 591
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 15/180 (8%)
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM-FSKAKELFEET 515
F+ LI + G ++ IS+F MK++ PN+ T NA++ + M F + + F+E
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
R ++PD T++S+L + WE ++ M+ + D +
Sbjct: 331 QRNC-------------VQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSY 377
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
LL + G+ L + +P+ + ++ ++ +++A+ L M Y
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/281 (17%), Positives = 111/281 (39%), Gaps = 16/281 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F+ G + + + +SG ++ F M + G +TY ++ A
Sbjct: 255 IFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG 314
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN-NGRWQDAMLVVEKIKSLRHSKPL 454
+ G + VA + QR V + + +C+ G W+ A + +++ + R + +
Sbjct: 315 KGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDV 374
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
++ L+ + GG +D I M PN+ + + ++ +++ F +A LF
Sbjct: 375 -FSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
E N + D +Y+++L + E + + MA G + D
Sbjct: 434 EMRYLN-------------IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ LL + GK ++ F + +P+ L ++ ++
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLI 521
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 176/411 (42%), Gaps = 51/411 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G W +A + + +K + L + + L+A + G+ A R+ + M
Sbjct: 107 LMDAYGRTKQWTEAENTF---HLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMK 163
Query: 256 EDCNLYPDIAAYHSVAVTLGQVG---LLKELVKLIERMRQKP-----------------S 295
E N P + Y++ L + G L +++ + ++ P S
Sbjct: 164 ES-NCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHS 222
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNA------CVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ +++ + + P L Y A++NA CV + + +F +L+ G P
Sbjct: 223 AKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEE------IFAELQSVGFVPDI 276
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY +E + G E F M ++G ++Y +L+ AF G I++A A +
Sbjct: 277 YTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDS 336
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M++ G T + L GR DA V +++S+ +P F L+ + + G
Sbjct: 337 MKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESM-GVEPDTFMFNSLLGAYGNSG 395
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+D S+++ M+ C+P+I T+N ++ VY++ +A+E+F S G+T
Sbjct: 396 RMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSL---ESKGFT---- 448
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
PD +++S++ A + + VY+ M ++GC D+ LL
Sbjct: 449 ------PDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLL 493
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/433 (20%), Positives = 167/433 (38%), Gaps = 35/433 (8%)
Query: 206 WRQAMSVLDWVY-GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
WR A+ + +W+ G K D+ + L+ G+ + EA F+LM + P
Sbjct: 81 WRSAIVIYEWILQGSMFKPDVG---CFNMLMDAYGRTKQWTEAENTFHLM-KKFQCLPTE 136
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
+++ + + G L+ +++ M++ P LV YN L
Sbjct: 137 TSFNVLMAAYSRGGQLERAERVLHEMKESNCS---------------PGLVTYNTYLEVL 181
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
S W+ VF++++ G+ P+ T+ L + + ++ F+ M K+
Sbjct: 182 NKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSL 241
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
TY L+ A EG A ++ G V Y L G A V E
Sbjct: 242 FTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFET 301
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRND 503
+ K +++ LI + G I D +I+ MK +P + + +L + +
Sbjct: 302 MLEA-GVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAG 360
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+ A+ R S G ++PD + ++S+L A + + + E +Y+ M
Sbjct: 361 RVTDAENFVR---RLESMG----------VEPDTFMFNSLLGAYGNSGRMDKMESLYESM 407
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
S C+ D L+ ++ G E F+SL G P + +T ++ + Y
Sbjct: 408 QGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLY 467
Query: 624 EKAVALINAMAYA 636
K V++ M A
Sbjct: 468 RKCVSVYQKMLIA 480
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 37/407 (9%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y ++ K G EA + M+ED ++ PD+ Y++V L + G ++E + L
Sbjct: 79 SPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSGRVEEALLL 137
Query: 287 ---IERMRQKPSKRIKN------MHRKNWDPVLE-----------PDLVVYNAVLNACVP 326
+ER+ P++R N + D + PD Y +++
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAK 197
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + + +F+++ SG+ PSA TY + + M + D E F+ M G T
Sbjct: 198 AGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFT 257
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
+ +L+ A + GK++EA ++ M G V Y L LC+ R DA ++E +
Sbjct: 258 FNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMF 505
R KP +T LI G I + + M + P++ T N ++ + R
Sbjct: 318 K-RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+A+EL + L P+ TY++++ A++ V+ M
Sbjct: 377 ERARELLSDMVARG-------------LAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP-HPLFFT 611
SGC + + L++ AG+ F ++ AG P H ++ T
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 136/311 (43%), Gaps = 25/311 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D L++ + +K R M SG+ + ++ G+ + +A L+ +
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEA---LELFKSM 246
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ K SRF + L+ K G+ EA R+ M +D ++ PD+ Y ++ L +
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV-PDVVTYSTLISGLCSIAR 305
Query: 280 LKELVKLIERM--RQ-KPSKRIKN--MH-----------RKNWDPVLE----PDLVVYNA 319
+ + L+E M RQ KP+ +N +H R+ D ++ PD+V YN
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++ + Q + + + GL P+ TY + + ++ + F +M SG
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
A TY L+ F G+++ + M G+ VY LA LC +GR A+
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485
Query: 440 LVV-EKIKSLR 449
++ E +SLR
Sbjct: 486 EILREGRESLR 496
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 164/415 (39%), Gaps = 34/415 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KAG+ ++A +F +L + P AY S+ L + +L
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKLLHS-GVTPSTVAYTSLIHGLCMANSFDDARELF--- 68
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+M+R+ P P V YN +++A + + K++ + G P
Sbjct: 69 --------ADMNRRGCPP--SP--VTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVV 116
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY M+ + +SG+ + F +M + G ++ ++ ++ KI++A M
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
E R + + Y L L G+ +A + ++ P +T+ +I
Sbjct: 177 EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLD-SGITPSAVTYNVVIHGMCLAYT 235
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+D+ + +F+ M+ C P+ T N ++ + + K E F R G+
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKR---GKMDEAFRLLKRMTDDGHV----- 287
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
PD TYS+++ + + + ++ + M C+ L+ +AG+
Sbjct: 288 -----PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHIT 641
D+++ +G+ P + + ++ E+A L++ M AP +T
Sbjct: 343 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 397
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/403 (19%), Positives = 168/403 (41%), Gaps = 35/403 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD Y +++ + + +F++L SG+ PS Y + + + +D
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E F M + G +TY V++ A + G + EA ++ M + G V Y + L
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C +GR ++A+L+ +++ L P + +I+ ID +F M+ P+
Sbjct: 126 CKSGRVEEALLLFNEMERL-GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ ++ ++ ++A +LF R SG T P TY+ ++
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFR---RMLDSGIT----------PSAVTYNVVIHGMC 231
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIP 605
A+ + ++K M GC+ + L+ + GK ++ AF + + G +P
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK---MDEAFRLLKRMTDDGHVP 288
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMA---YAPFHITERQWTE-LFESNEDRISRDKL 661
+ ++ ++ + + A L+ M P +T+ L ++ + +R+
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE-- 346
Query: 662 EKLLNALCNCNAASSEITVSNLSRALHALCR---SEKERDLSS 701
+L+A+ + + +T + L +H CR +E+ R+L S
Sbjct: 347 --VLDAMVSSGQSPDVVTYNTL---VHGHCRAGQTERARELLS 384
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 21/258 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G ++A VLD + D+ Y L+ +AG+ A + + M+
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDV---VTYNTLVHGHCRAGQTERARELLSDMV 387
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L P++ Y ++ L + L E + +M+ P+L
Sbjct: 388 AR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA---------------PNLF 431
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y A++ + Q G +F ++ +G+ P YG + +SG+ E R+
Sbjct: 432 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREG 491
Query: 376 AKS--GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+S EA G Y+ V + GK+ A+ VR+M + G + L LC +G
Sbjct: 492 RESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551
Query: 434 RWQDAMLVVEKIKSLRHS 451
+ +A V+E+I L +
Sbjct: 552 QGGEARAVLEEIMDLAYG 569
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/391 (16%), Positives = 150/391 (38%), Gaps = 54/391 (13%)
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ P + +YG+ ++ + ++GK + + F+K+ SG + Y L+ ++A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+M +RG + Y + C G ++A +++K+ H P +T+ ++
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDG 124
Query: 465 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G +++ + +F M+ C PN + N ++ + +A ++F E
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM-------- 176
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+ + PD ++Y +++ A
Sbjct: 177 -----EARDIPPDSWSYGILIDGLA----------------------------------- 196
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
+AGK + F +L++G P + + ++ + ++A+ L +M +
Sbjct: 197 KAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRF 256
Query: 644 QWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKER----DL 699
+ L +++ R D+ +LL + + +T S L L ++ R + R D+
Sbjct: 257 TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 700 SSSAHFGSQAIDISPLHGIHEAFDVKETENV 730
+ + +HG+ +A +KE V
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 185/457 (40%), Gaps = 50/457 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT ++ L R HEA + M NL P++ Y + L + G + E V L+
Sbjct: 47 YTYTAVIHALCVENRLHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALLS 105
Query: 289 RMRQK--PSKRIKN----------MHRKNWDPVLE-------PDLVVYNAVLNACVPSHQ 329
+MR+K P+ N + +D + E PD+ Y ++ S +
Sbjct: 106 KMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 165
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-GALTYK 388
VF+QL G +P TY ++ + + G+ + F +M KSG + +TY
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ F GK++EA+ + M + G Y L C R DA ++ ++ +
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM-TR 284
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ P +TFT L+ + D + I M + C P + T N +L Y R + +
Sbjct: 285 KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344
Query: 508 AKELFEETTRANSSGYTF-----------LSGDGAPL---------KPDEYTYSSMLEAS 547
A++ E + +F S + L PD Y+++++
Sbjct: 345 ARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 548 ATAHQWEYFEYVYKGMALS-GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ + VY+ M GC + ++ L+ AG +L+ A +E G +P+
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAG---MLDRA-RGYIEKGCVPN 460
Query: 607 PLFFTEMLIQAIVQSNY-EKAVALINAMAYAPFHITE 642
+ +LI A ++N E A L++ M F + +
Sbjct: 461 IGTY-NLLIDAFRKANRDEDARELLDDMVQRGFGVVQ 496
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 134/335 (40%), Gaps = 29/335 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ Y AV++A ++ +++ L P+ TY + ++ + + G+ D
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K A+TY L+ + + +EA + M G + Y L C
Sbjct: 104 LSKMRKKCVPT-AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNI 489
+ + DA+ V E++ + R +P +T++ LI G + + I +F M C PN
Sbjct: 163 SKKSDDALRVFEQLVA-RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSG-----YTFLSG-------DGA------ 531
T N+++ + R +A L E SS T ++G D A
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281
Query: 532 ----PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
L PD T++S+++ ++ ++ M C + +L RA +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
LE A +LE + P + ++I+ + + N
Sbjct: 342 ---LEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN 373
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 25/327 (7%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D V Y +++ + + ++ G P TY + + + +F
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+MA +TY VL+ + G+++EAVA + M ++ V TA Y L LC
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKA 128
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGT 491
R +A ++E++ P T+T LI DD + +F+ + P++ T
Sbjct: 129 ERASEAYDLLEEM-VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+ ++ + +A +LF ++ S P+ TY+S++
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSC------------MPNTVTYNSLISGFCRMG 235
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL--LEHAFDSL---LEAGEIPH 606
+ + + + MA +G D + L+ G C L L+ A+D L G P
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLM-----NGFCKLARLDDAYDLLNQMTRKGLTPD 290
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAM 633
+ FT ++ ++ AV ++ M
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEM 317
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/322 (19%), Positives = 133/322 (41%), Gaps = 21/322 (6%)
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+TY L++ + ++ +A+ + M +G Y + LC R +A +E+
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDM 504
+ + R+ P +T+T LI GG +D+ +++ M+ C P T N+++ + +
Sbjct: 72 MAN-RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAER 130
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
S+A +L EE + PD +TY++++ + + + V++ +
Sbjct: 131 ASEAYDLLEEMVYSGCI-------------PDIFTYTTLITGFCKSKKSDDALRVFEQLV 177
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE-IPHPLFFTEMLIQAIVQSNY 623
G + D ++ L+ + G+ F ++++G +P+ + + ++
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237
Query: 624 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNL 683
++A+ L+ MA +T L D LLN + +T ++L
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297
Query: 684 SRALHALCRSEKERDLSSSAHF 705
+ LCR E LS + H
Sbjct: 298 ---MDGLCR---ENRLSDAVHI 313
>gi|302757297|ref|XP_002962072.1| hypothetical protein SELMODRAFT_63596 [Selaginella moellendorffii]
gi|300170731|gb|EFJ37332.1| hypothetical protein SELMODRAFT_63596 [Selaginella moellendorffii]
Length = 413
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 178/397 (44%), Gaps = 47/397 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A+++ + +K R + + YT ++ L A R+F+ ++
Sbjct: 33 LITGLMKDGDEADAIAIFE---RMKQDRVAPTLYTYTAVMRALAHVQGWESAHRMFSELV 89
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR-----KNWDPVL 310
+L PD+A Y+++ G+ L+ +++ ERMR++ ++N+ +
Sbjct: 90 VHGSLKPDVAMYNTMLAAYGRGHKLERVLQTWERMRKEGC--VENVGTYCLLVSTFVQTN 147
Query: 311 EPDLV-----------------VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ DL +Y ++ C +W FK++ +SG KP+ TY
Sbjct: 148 QADLALDAYARMNSQGLKATDGIYRGLVCVCATQGRWLVALTFFKEMLESGCKPTIVTYN 207
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ M + ++GK+++V + +M SG A T ++ + + A+ +++
Sbjct: 208 VLMRALGKAGKWEIVLDLLPRMKASGVAPDFYTVNAVLNGLIAAREFDRAMLFFHSVKSS 267
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G+ VY + + W+ A+ +V++++ + P E+TF L+++ + ++
Sbjct: 268 GMKLDREVYNVILVACQKSKNWEAALSLVQEMEQTGIA-PNEVTFGPLLVACENAKQVEV 326
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ +++HMK C PN V ++++ + M+ +A+ ++ ++
Sbjct: 327 ALRLYEHMKQRRCVPNTHVVASLIRACGKELMWQQARNIYRVSS---------------- 370
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
P+ Y Y+++++A + ++ + V + M GCQ
Sbjct: 371 --PNVYVYNALIDAYCRSQKYHLAKKVDRRMIEEGCQ 405
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 146/371 (39%), Gaps = 32/371 (8%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L +AGR A ++ L D AY+S+ L + G + + + ERM+Q
Sbjct: 2 LSRAGRRRTAFKVLE-WLSDRKRGIHANAYNSLITGLMKDGDEADAIAIFERMKQDR--- 57
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG-LKPSAATYGLAM 356
+ P L Y AV+ A W+ +F +L G LKP A Y +
Sbjct: 58 ------------VAPTLYTYTAVMRALAHVQGWESAHRMFSELVVHGSLKPDVAMYNTML 105
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ K + V + + +M K G TY +LV F + + + A+ A M +G+
Sbjct: 106 AAYGRGHKLERVLQTWERMRKEGCVENVGTYCLLVSTFVQTNQADLALDAYARMNSQGLK 165
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
T +Y L C GRW A+ +++ KP +T+ L+ + G + +
Sbjct: 166 ATDGIYRGLVCVCATQGRWLVALTFFKEMLE-SGCKPTIVTYNVLMRALGKAGKWEIVLD 224
Query: 477 IFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ MK P+ TVNA+L F +A F SSG +K
Sbjct: 225 LLPRMKASGVAPDFYTVNAVLNGLIAAREFDRAMLFFHSV---KSSG----------MKL 271
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
D Y+ +L A + WE + + M +G ++ LLV A + + +
Sbjct: 272 DREVYNVILVACQKSKNWEAALSLVQEMEQTGIAPNEVTFGPLLVACENAKQVEVALRLY 331
Query: 596 DSLLEAGEIPH 606
+ + + +P+
Sbjct: 332 EHMKQRRCVPN 342
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 113/549 (20%), Positives = 216/549 (39%), Gaps = 57/549 (10%)
Query: 116 LKEMFEKDL-------NWVLDDDVQLGSDYFAKNV-EWHPEKRWRSEAEAIRVLVDRLSE 167
L EM +KD N ++ ++G A+NV + E+ + L+ +
Sbjct: 115 LDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQ 174
Query: 168 REMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
+ K + M +SGL LL GL + + +L+ + + D
Sbjct: 175 TNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPD--- 231
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y ++A L ++G+ EA +I M+E PD+ Y+S+ +V + E +L+
Sbjct: 232 TFSYNTVVACLCESGKYEEAGKILEKMIEK-KCGPDVVTYNSLMDGFCKVSKMDEAERLL 290
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + P ++ Y ++ + + + V + + K+G+ P
Sbjct: 291 EDMVGRRCA---------------PTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISP 335
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY ++ + ++GK + HE M + A +TY +LV + GK+++A +
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLL 395
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M +RG + + C G+ + V+E +K + + P +T++ LI
Sbjct: 396 EMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT-PDVVTYSTLIDGYCK 454
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGY 523
+ D +I P+ + ++ML+ +A+E+ + T+ SS Y
Sbjct: 455 ANRMQDAFAILGI-----SPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHY 509
Query: 524 TFLSGDGAPLK------------------PDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+ G ++ P+ YTYS ++ + E V M
Sbjct: 510 ALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLE 569
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS-NYE 624
GC D + L+ + K F ++ ++G P L + +LI QS N E
Sbjct: 570 KGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYN-ILISGFCQSGNVE 628
Query: 625 KAVALINAM 633
KA+ ++ M
Sbjct: 629 KAIEVMQLM 637
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 164/403 (40%), Gaps = 42/403 (10%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+R L+ S + A ++ + M ++G+ LL GL G +
Sbjct: 296 RRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEE 355
Query: 209 AMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A +L+ + ++D V Y+ L+ L K G+ +A + +MLE P++ +
Sbjct: 356 AHELLEVMV----EKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER-GCQPNLVTF 410
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+++ + G + E K++E M++ PD+V Y+ +++ +
Sbjct: 411 NTMIDGFCKAGKVDEGHKVLELMKEVSCT---------------PDVVTYSTLIDGYCKA 455
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + F + G+ P A+Y +E + +GK + E M K G + Y
Sbjct: 456 NRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHY 509
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+++ + + +EA+ ++ M +RG Y L LC R +DA+ V++ +
Sbjct: 510 ALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLE 569
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
+ P T+T LI +D F+ M+D CEP+ N ++ + ++
Sbjct: 570 -KGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVE 628
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
KA E+ + + PD TY S++ + T
Sbjct: 629 KAIEVMQLMLEKGCN-------------PDAATYFSLMRSLTT 658
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/424 (18%), Positives = 150/424 (35%), Gaps = 68/424 (16%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y L+ +AG L I N ML PD+ ++++ Q+G L
Sbjct: 23 SNSTYGALITGFSRAGNSKMVLEIANEMLAR-RFSPDVITHNTILKAYCQIGDL------ 75
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ + + K W P Y +++ + + + ++ +
Sbjct: 76 --------DRALSHFRGKMW---CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P AA Y + + + GK D + M + +TY L+ + ++EA
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184
Query: 407 VRNMEQRGVVGTASVYYEL-----------------------------------ACCLCN 431
+ M++ G+ Y L CLC
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 490
+G++++A ++EK+ + P +T+ L+ +D+ + + M C P +
Sbjct: 245 SGKYEEAGKILEKMIE-KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI 303
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T ++ +SR D + A + E+ +A S PD TY+ +L+ A
Sbjct: 304 TYTTLIGGFSRADRLADAYRVMEDMFKAGIS-------------PDLVTYNCLLDGLCKA 350
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ E + + M C D ++ L+ + GK + +LE G P+ + F
Sbjct: 351 GKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTF 410
Query: 611 TEML 614
M+
Sbjct: 411 NTMI 414
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 115/303 (37%), Gaps = 48/303 (15%)
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKM---------------AKSGEAIG------- 383
KPS +TYG + ++G +V E +M K+ IG
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 384 -----------ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
A TY +L+ + +I+EA + M Q+ A+VY L LC
Sbjct: 81 HFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
G+ DA V K+ R P IT+T LI+ +D+ + + MK+ P+
Sbjct: 141 GKI-DAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
NA+L + + + +L EE A +PD ++Y++++ +
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGR-------------EPDTFSYNTVVACLCESG 246
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
++E + + M C D + L+ + K E + ++ P + +T
Sbjct: 247 KYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYT 306
Query: 612 EML 614
++
Sbjct: 307 TLI 309
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 19/202 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L+GL G +A V+D + + + Y ++ L R EAL++ +M
Sbjct: 477 MLEGLCSTGKVEEAQEVMDL---MTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMS 533
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E P++ Y + L + +++ + +++ M +K PD+
Sbjct: 534 ER-GCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCV---------------PDVA 577
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++++ ++ + FK +R SG +P Y + + QSG + E + M
Sbjct: 578 TYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLM 637
Query: 376 AKSGEAIGALTYKVLVRAFWEE 397
+ G A TY L+R+ E
Sbjct: 638 LEKGCNPDAATYFSLMRSLTTE 659
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 163/369 (44%), Gaps = 40/369 (10%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L++LG+A +P A +F+ + ++ + Y+S+ + G + +L+ RM+ +
Sbjct: 86 MLSVLGRANQPGLAQELFDR--AESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDR 143
Query: 294 PSKR--------IKNMHRKN-------------WDPVLEPDLVVYNAVLNACVPSHQWKG 332
+ IK R + L PD + YN +++AC +++
Sbjct: 144 GCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSD 203
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+F+++++ G P TY + V ++G+ + FR M + G A+TY ++
Sbjct: 204 AILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLH 263
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN-GRWQDAMLVVEKIKSLRHS 451
AF +G+I E V +R M + + + Y + G + A + ++K
Sbjct: 264 AFARDGRIEE-VERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKE-EGR 321
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
P +TFT LI + G +++ ++F+ M K P + +AM+ Y++ DMFS A+
Sbjct: 322 CPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEH 381
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
+ RA ++PD YS ML+ A E +YK M SG +
Sbjct: 382 TYSCMLRAG-------------VRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKP 428
Query: 571 DQTKHAWLL 579
+ + +A ++
Sbjct: 429 ELSVYAIMV 437
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 151/386 (39%), Gaps = 88/386 (22%)
Query: 330 WKGVFWVFKQLRK-----------------------------------SGLKPSAATYGL 354
W+ VF+ L++ +GL+P+AA
Sbjct: 651 WQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANY 710
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+E ++GK + EF++++ + G + T+ V+ AF G + EA + R M + G
Sbjct: 711 VLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAG 770
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ V+ L DA +V+ IK ++I + + S G +
Sbjct: 771 FSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAA 830
Query: 475 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+ +F+ M++ C P+ T N ++ +YSRN M +A+ L E + ++
Sbjct: 831 L-VFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNA------------ 877
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK------ 587
P+ TY++++ A +E E V+K +A +GC+ D T + ++ +AG+
Sbjct: 878 -PNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEE 936
Query: 588 ----------------CHLL-------------EHAFDSLLEAGEIPHPLFFTEMLIQAI 618
H+L E ++L E G P + +T ++ +
Sbjct: 937 VIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHL 996
Query: 619 VQSNYEKAVALINAMAYA---PFHIT 641
+Y AV + M A P H+T
Sbjct: 997 NNKDYLSAVIWLRKMTDACVRPTHVT 1022
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
+P IT+ LI + + D I IF+ M + C+P+I T NAM+ VY R A
Sbjct: 182 RPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASS 241
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
+F G+T PD TY+S+L A A + E E + M + C
Sbjct: 242 IFRIM---QEQGFT----------PDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSS 288
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
D+ + ++ +AG E + + E G P + FT ++
Sbjct: 289 DEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLI 332
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 99/498 (19%), Positives = 186/498 (37%), Gaps = 85/498 (17%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++D R Y ++ + GKAG +A ++ M E+ PD + + TLG+ G
Sbjct: 281 MRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRC-PDSVTFTVLIDTLGKAG 339
Query: 279 LLKELVKLIERMRQ---KPSKRI-----------------KNMHRKNWDPVLEPDLVVYN 318
+ E + E M + +P+ + ++ + + PDL+ Y+
Sbjct: 340 FVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYS 399
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK- 377
+L+ + + ++K + SGLKP + Y + + V Q + ++M +
Sbjct: 400 VMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEMVQS 459
Query: 378 -----------------------------SGEAIGALTYKVLVRAFWEEGKINEA---VA 405
G A+ T ++ AF GK+++A V
Sbjct: 460 SASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVH 519
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT-FTGLIIS 464
AV ++E A +Y LA L GR+ +A E++++ + +++ F ++++
Sbjct: 520 AVSSIEPS---VAAHLYKRLALMLAKAGRFSEAE---EEMRTSQTYGQAQVSDFLKVLVA 573
Query: 465 SMD-GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA---- 518
S D G D+ ++ F M + E + + + Y R A EL + A
Sbjct: 574 SYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFEVK 633
Query: 519 NSSGYTFLSGDGAPLK------------------PDEYTYSSMLEASATAHQWEYFEYVY 560
+S+ + + LK + YS++L A A +E
Sbjct: 634 DSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRAL 693
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M +G Q + ++L RAGK L + L E G P+ F +
Sbjct: 694 DNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRN 753
Query: 621 SNYEKAVALINAMAYAPF 638
N E+A ++ M A F
Sbjct: 754 GNLEEARSMYRQMREAGF 771
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 100/233 (42%), Gaps = 17/233 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y ++++ K G +A +F M ++ PD ++++ + + +++E L+
Sbjct: 812 IYNHMISLYSKLGSYRKAALVFKGM-QEIGCSPDATTFNTLIMLYSRNQMVQEAQALLRE 870
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M IK + P++ Y +++A ++ VFK + ++G KP A
Sbjct: 871 M-------IKTGN--------APNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDA 915
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y + + V ++G++ + E +M G T +L+ ++ + G +A +
Sbjct: 916 TAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLET 975
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
+ + G+ A Y + NN + A++ + K+ +P +T T +
Sbjct: 976 LPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTD-ACVRPTHVTITCFV 1027
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 35/204 (17%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
LE D+ +YN +++ ++ VFK +++ G P A T+ + + ++
Sbjct: 806 LELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQ 865
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
R+M K+G A TY L+ A+ +A +++ + G A+ Y
Sbjct: 866 ALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAY------- 918
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
+ M+ V + K+ H K E+ I Q D EP++
Sbjct: 919 -------NVMINVYR-KAGEHRKIEEV--------------------IEQMKADGFEPSL 950
Query: 490 GTVNAMLKVYSRNDMFSKAKELFE 513
T++ ++ Y + KA+E+ E
Sbjct: 951 TTIHMLMDSYGKGGATGKAEEVLE 974
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 123/583 (21%), Positives = 225/583 (38%), Gaps = 94/583 (16%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLL------KGLGDKGSWRQAM 210
A L+ LS MTA +M++ M +EG LL L G+ A
Sbjct: 182 AYSALLIHLSRLGMTAA------VMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 235
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE---ALRIFNLML-EDCNLYPDIAA 266
+++ V+ + D F YT + ILG R H+ AL++FN M E C P+
Sbjct: 236 TIMKKVFESEMSPD---TFTYTSM--ILGHC-RKHDLDSALQVFNQMAKEGCE--PNTVT 287
Query: 267 YHSVAVTLGQVGLLKELVKLIERM-----------RQKPSKRIKNM--HRKNW------- 306
Y ++ L G + E LI M P + +M + W
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+ EP++ Y A+++ S K +F ++ + G+ P+ TY + +++++ +
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
M ++G + +TY +++ + G +A+ + NM QRG Y +
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467
Query: 427 CCLCNNGRWQDAMLVVE----------------------KIKSLRHS------------K 452
C++G A+ +++ KI + +
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P E+T+T LI +D S+ +HMK C PN+ T N ++ ++ + FS A+EL
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+ + P+ TY++M++ ++ M GC +
Sbjct: 588 CKVMIEEG-------------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
++ L+ + GK E+ F L G IP + + +M+ I+ E A +
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 632 AMAYAPFHITERQWTELFES--NEDRISRDKLEKLLNALCNCN 672
M A T + L + NE ++ +L L + + NC+
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/520 (19%), Positives = 194/520 (37%), Gaps = 49/520 (9%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
+ L+K K + + MS LD + GL+ F Y+ LL L + G + +
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLR-----MGLFAYSALLIHLSRLGMTAAVMDRY 203
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ ML + + P++ Y++V L + G + + + + +K ++ +
Sbjct: 204 HRMLSE-GVQPNLLIYNAVINALCKDGNVAD---------------AETIMKKVFESEMS 247
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y +++ H VF Q+ K G +P+ TY + + SG+ + +
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL 307
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
R+M G A T + A + G +A +M+ +G Y L LC
Sbjct: 308 IREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+G + A+ + ++ S P +T+ LI ++ I + M ++ C PNI
Sbjct: 368 SGLLKVAIGLFHRM-SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426
Query: 491 TVNAMLKVYS-----------RNDMFSKAKELFEETTRANSSGYT------------FLS 527
T N M+K Y N+M + T GY L
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
DG KPDE++Y+ ++ + E ++ M G ++ + L+ + K
Sbjct: 487 RDGG-CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 647
+ + +G P+ + ++ Q+N+ A L M +T
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 648 LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 687
+ + S ++ N + + +T S+L RAL
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 184/434 (42%), Gaps = 32/434 (7%)
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
D S+R L + + L +TKLL+ + K G+ + A+ + +E L
Sbjct: 68 DASSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLS 127
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI +++++ + L+ ++ SK IK L+PD V +N ++
Sbjct: 128 PDI---YTLSILIDCFSHLQR----VDLAFSVFSKMIK--------LGLQPDAVTFNTLI 172
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N ++ F SG +P+ TY + + + G+ F+KM ++G
Sbjct: 173 NGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQ 232
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+TY +L+ + ++ +NEA+ M+ + + Y L LCN RW++A +
Sbjct: 233 PNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASAL 292
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
+ ++ SL + P TF L+ + G + + +F+ M + EP++ T ++++ YS
Sbjct: 293 LNEMTSL-NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYS 351
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+A++LF+ KPD ++Y+ +++ A + + + ++
Sbjct: 352 LRMEIVEARKLFDAMITKGC-------------KPDAFSYNILIKGYCKAKRIDEAKQLF 398
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M G D + L+ + G+ + F ++ G +P LF ML+ +
Sbjct: 399 NEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPD-LFTYSMLLDGFCK 457
Query: 621 SNY-EKAVALINAM 633
Y KA L M
Sbjct: 458 EGYLGKAFRLFRVM 471
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 138/320 (43%), Gaps = 21/320 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + W++A ++L+ + L ++ F + L+ + K G+ EA +F M
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNI---FTFNVLVDAICKEGKVSEAQGVFKTMT 332
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + PD+ Y S+ + E KL + M K K PD
Sbjct: 333 E-MGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCK---------------PDAF 376
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++ + + +F ++ GL P Y + + Q G+ + F+ M
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G TY +L+ F +EG + +A R M+ + ++Y L +C G
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
+DA + ++ ++ P +T +I + G +D+ + F++M+ D C P+ + N
Sbjct: 497 KDARKLFSEL-FVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNV 555
Query: 495 MLKVYSRNDMFSKAKELFEE 514
+++ + + S+A +L E
Sbjct: 556 IIRGFLQYKDESRAAQLIGE 575
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 21/213 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ KA R EA ++FN M+ L PD Y+++ L Q+G L+E L +
Sbjct: 376 FSYNILIKGYCKAKRIDEAKQLFNEMIHQ-GLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434
Query: 289 RMRQKPS--------------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M + + + R L+PD+ +YN +++A
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG 494
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
K +F +L GL P+ Y + + + G D E FR M G +Y
Sbjct: 495 NLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYN 554
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
V++R F + + A + M RG V A
Sbjct: 555 VIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 123/583 (21%), Positives = 225/583 (38%), Gaps = 94/583 (16%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLL------KGLGDKGSWRQAM 210
A L+ LS MTA +M++ M +EG LL L G+ A
Sbjct: 182 AYSALLIHLSRLGMTAA------VMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 235
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE---ALRIFNLML-EDCNLYPDIAA 266
+++ V+ + D F YT + ILG R H+ AL++FN M E C P+
Sbjct: 236 TIMKKVFESEMSPD---TFTYTSM--ILGHC-RKHDLDSALQVFNQMAKEGCE--PNTVT 287
Query: 267 YHSVAVTLGQVGLLKELVKLIERM-----------RQKPSKRIKNM--HRKNW------- 306
Y ++ L G + E LI M P + +M + W
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+ EP++ Y A+++ S K +F ++ + G+ P+ TY + +++++ +
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
M ++G + +TY +++ + G +A+ + NM QRG Y +
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467
Query: 427 CCLCNNGRWQDAMLVVE----------------------KIKSLRHS------------K 452
C++G A+ +++ KI + +
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P E+T+T LI +D S+ +HMK C PN+ T N ++ ++ + FS A+EL
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+ + P+ TY++M++ ++ M GC +
Sbjct: 588 CKVMIEEG-------------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
++ L+ + GK E+ F L G IP + + +M+ I+ E A +
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 632 AMAYAPFHITERQWTELFES--NEDRISRDKLEKLLNALCNCN 672
M A T + L + NE ++ +L L + + NC+
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/520 (19%), Positives = 194/520 (37%), Gaps = 49/520 (9%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
+ L+K K + + MS LD + GL+ F Y+ LL L + G + +
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLR-----MGLFAYSALLIHLSRLGMTAAVMDRY 203
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ ML + + P++ Y++V L + G + + + + +K ++ +
Sbjct: 204 HRMLSE-GVQPNLLIYNAVINALCKDGNVAD---------------AETIMKKVFESEMS 247
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y +++ H VF Q+ K G +P+ TY + + SG+ + +
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL 307
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
R+M G A T + A + G +A +M+ +G Y L LC
Sbjct: 308 IREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+G + A+ + ++ S P +T+ LI ++ I + M ++ C PNI
Sbjct: 368 SGILKVAIGLFHRM-SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426
Query: 491 TVNAMLKVYS-----------RNDMFSKAKELFEETTRANSSGYT------------FLS 527
T N M+K Y N+M + T GY L
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
DG KPDE++Y+ ++ + E ++ M G ++ + L+ + K
Sbjct: 487 RDGG-CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 647
+ + +G P+ + ++ Q+N+ A L M +T
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 648 LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 687
+ + S ++ N + + +T S+L RAL
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 22/288 (7%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
KG +A VL + D+ +YT L+ +L GR EA +F+ M+E P
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDV---ILYTSLIDLLFSTGRVPEARHVFDSMIEK-GCAP 351
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D Y ++ ++G ++ +++E M + + PD YN++++
Sbjct: 352 DALTYGTIIQNFSKIGNVEAAGEILELMAKSG---------------VGPDCFAYNSLMD 396
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
V + F V+ ++ SG+KP+A T+ + M + + GK D F++M + E
Sbjct: 397 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVP 456
Query: 383 GAL-TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
L +Y +L+ + G+++EA + M RG++ Y L L GR +A +
Sbjct: 457 PTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 516
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPN 488
VE + L + ++ ++ LI +D +D +FQ MK C PN
Sbjct: 517 VEDMVKLGVNPDVQ-AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 563
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 153/389 (39%), Gaps = 31/389 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT ++ L + R EA +F L+ P++ AY +V L + G +++ +K E M
Sbjct: 111 YTTVIKGLADSKRIDEACELFE-ELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEM 169
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
P Y V++ + VF+Q+ + G P
Sbjct: 170 SGSSCV---------------PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 214
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ ++ K D + M G A+TY +V F + INEA + M
Sbjct: 215 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 274
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+RG ++ L + GR ++A V+ ++ + R P I +T LI G
Sbjct: 275 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTA-RGCAPDVILYTSLIDLLFSTGR 333
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ + +F M + C P+ T +++ +S+ A E+ E + SG
Sbjct: 334 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK---------SGV 384
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
G PD + Y+S+++ + + VY M SG + + L+ + GK
Sbjct: 385 G----PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 440
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
F +LE E+P L +LI +
Sbjct: 441 RAFSLFKEMLEKEEVPPTLVSYTILIDGL 469
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 154/387 (39%), Gaps = 43/387 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ KA + EA ++ ++ML P Y S+ ++ ++ E ++I +M
Sbjct: 216 YTTLIDGFSKASKMDEARKLLDVMLTK-GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 274
Query: 291 RQK---PSKRI----------KNMHRKNWDPVLE-------PDLVVYNAVLNACVPSHQW 330
R++ P I K + + + E PD+++Y ++++ + +
Sbjct: 275 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 334
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
VF + + G P A TYG ++ + G + E MAKSG Y L
Sbjct: 335 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSL 394
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ + + ++++A M G+ A + L L +G+ A + +++
Sbjct: 395 MDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEE 454
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
P +++T LI G + + FQ M D P T +++ ++ +AK
Sbjct: 455 VPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAK 514
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS----MLEASATAHQWEYFEYVYKGMAL 565
+L E+ + + PD YS+ ++++S W+ F+ + K
Sbjct: 515 KLVEDMVKLG-------------VNPDVQAYSALITGLIDSSMVDTAWDVFQEMMK---- 557
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLE 592
GC ++ + L AG+ LE
Sbjct: 558 RGCAPNEVTYKVLRRGFRAAGRALDLE 584
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 157/410 (38%), Gaps = 45/410 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +++ L + EA + FN M+++ PD+ A+ ++ + G
Sbjct: 10 YNTVISGLASIDKMDEAYKFFNSMIDN-GCEPDVIAFTTLIHGFCKAG------------ 56
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + ++ N K + PD+ +Y +V++ C G F + P A
Sbjct: 57 QPQVGHKLLNQALKRF----RPDVFLYTSVIHGYCKAGDLDTGYF--------RAVTPKA 104
Query: 350 A----TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
+ +Y ++ + S + D E F ++ +G + + Y ++ + G+I + +
Sbjct: 105 SLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 164
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
M V T + Y + LC DA V E++ + P IT+T LI
Sbjct: 165 NFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQ-KGCVPDTITYTTLIDGF 223
Query: 466 MDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+D+ + M EP T +++ + + DM ++AKE+ +
Sbjct: 224 SKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC---- 279
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
+P + ++S+L + + E V M GC D + L+
Sbjct: 280 ---------EPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 330
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
G+ H FDS++E G P L + ++ N E A ++ MA
Sbjct: 331 TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 380
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/385 (17%), Positives = 148/385 (38%), Gaps = 35/385 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ KAG+P ++ N L+ PD+ Y SV + G L
Sbjct: 45 FTTLIHGFCKAGQPQVGHKLLNQALK--RFRPDVFLYTSVIHGYCKAGDLD--------- 93
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + P D++ Y V+ S + +F++L+ +G P+
Sbjct: 94 ---------TGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVV 144
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y ++ +L++G+ + + F +M+ S TY V++ + + +A M
Sbjct: 145 AYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM 204
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
Q+G V Y L + +A +++ + + + +P +T+ ++
Sbjct: 205 VQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT-KGPEPTAVTYGSIVHGFCKLDM 263
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
I++ + M++ CEP + ++L Y +A+E ++ T + G
Sbjct: 264 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK---GRAEEAYQVLTEMTARG------- 313
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
PD Y+S+++ + + +V+ M GC D + ++ S+ G
Sbjct: 314 ---CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 370
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEML 614
+ + ++G P + ++
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLM 395
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/381 (17%), Positives = 144/381 (37%), Gaps = 25/381 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EP +V YN V++ + + F + +G +P + + ++G+ + H+
Sbjct: 4 EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA-VAAVRNMEQRGVVGTASVYYELACCL 429
+ K Y ++ + + G ++ AV V+ +V LA
Sbjct: 64 LLNQALKRFRP-DVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA--- 119
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
++ R +A + E++K+ S P + +T +I + G I+D + F+ M C P
Sbjct: 120 -DSKRIDEACELFEELKTAGCS-PNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T ++ + M A ++FE+ + PD TY+++++ +
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCV-------------PDTITYTTLIDGFS 224
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A + + + M G + + ++ + + + + E G P
Sbjct: 225 KASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLF 284
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFESNEDRISRDKLEKL 664
FT +L + + E+A ++ M AP I + LF + +R + +
Sbjct: 285 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 344
Query: 665 LNALCNCNAASSEITVSNLSR 685
+ C +A + + N S+
Sbjct: 345 IEKGCAPDALTYGTIIQNFSK 365
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 76/205 (37%), Gaps = 55/205 (26%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G +A S+ + +K ++ V YT L+ LGKAGR EA F M
Sbjct: 429 LMHGLFKDGKTDRAFSLFKE---MLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEM 485
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ D + P+ Y S+ +L + G + E KL+E M
Sbjct: 486 I-DRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV----------------------- 521
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
K G+ P Y + ++ S D + F++
Sbjct: 522 ---------------------------KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQE 554
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGK 399
M K G A +TYKVL R F G+
Sbjct: 555 MMKRGCAPNEVTYKVLRRGFRAAGR 579
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 108/492 (21%), Positives = 201/492 (40%), Gaps = 41/492 (8%)
Query: 107 NLKRENLRELKEMFEKDLNWVL--DDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDR 164
NLK EN + + E D+ L + D+ L +YF K ++ ++++++
Sbjct: 29 NLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIAN---SKSFKHTPLTYQMMIEK 85
Query: 165 L-SEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKR 223
L SEREM + ++ M G+ +E + ++ GS QA+ Y ++D R
Sbjct: 86 LASEREMDCVQY-LLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTF---YRMQDFR 141
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
+ +Y +L L R I++ M +D + P++ Y+ + L + +
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKD-GMEPNVFTYNILLKALCKNNRVDGA 200
Query: 284 VKLIERMRQKPS---------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
KL+ M K K K + P + VYNA++N +
Sbjct: 201 HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEY 260
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
++ F + ++ G+ P+ +Y + + +G +L KM G + T+
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L++ F+ +G +EA+ M + GVV Y L LC+ DA+ V +++ +
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME-I 379
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
P T++ LI G +D ++ M H C PN+ M+ V RN MF++
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A L E N P+ T+++ ++ + + ++ V+ M SG
Sbjct: 440 AYCLIENMQVENC-------------PPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG 486
Query: 568 CQLDQTKHAWLL 579
C + T + LL
Sbjct: 487 CFPNTTTYNELL 498
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/325 (17%), Positives = 151/325 (46%), Gaps = 20/325 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P + +YN +L+A + ++++ + ++ ++K G++P+ TY + ++ + ++ + D H
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ +M+ G ++Y L+ + + GK+ EA R + + VY L +
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA----RELAM-SFTPSVPVYNALINGV 256
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C +++A +++++ + + P I++T +I + D G+++ +++ M C PN
Sbjct: 257 CKEYTFEEAFQLLDEMMN-KGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPN 315
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T +++K + +A + ++ R + P+ Y++++
Sbjct: 316 LHTFTSLIKGFFLKGGSHEALDFWDRMIREG-------------VVPNVVAYNALMHGLC 362
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ V+ M ++GC + ++ L+ ++AG ++ ++ G P+ +
Sbjct: 363 SKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM 633
+T M+ S + +A LI M
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENM 447
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 131/322 (40%), Gaps = 21/322 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL K S A+SV + ++ + Y+ L+ KAG A ++N M+
Sbjct: 357 LMHGLCSKRSLGDAVSVFNQ---MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+P++ AY + L + + + LIE NM +N P+ V
Sbjct: 414 TH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIE-----------NMQVENC----PPNTV 457
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N + S + VF Q+ SG P+ TY ++ +L+ ++ + M
Sbjct: 458 TFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM 517
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G + +TY ++ + G + EA+ + M RG A + C G+
Sbjct: 518 EHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ +++++ + + P I +T LI +++ I + M + PN+ T N
Sbjct: 578 NIAIQLMDRLSAGKW-HPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNV 636
Query: 495 MLKVYSRNDMFSKAKELFEETT 516
+++ N S A + + ++
Sbjct: 637 LVRHLFSNMGHSGAVQFLDASS 658
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 173/415 (41%), Gaps = 39/415 (9%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L + K L KG RQA L ++ + + + Y L+ L + G EAL+++
Sbjct: 161 LTIFKALSIKGGIRQAPFALG---KMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKR 217
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQ---VGLLKELVKLIERMRQKP--------------SK 296
M+ + L P + Y ++ V LG+ G + +L++ +E + +P +
Sbjct: 218 MISE-GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAG 276
Query: 297 RIKNMH---RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
RI + + + D PD+V Y +++A + + ++ ++R S KP TY
Sbjct: 277 RIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYI 336
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
M G + V F+ +M G A +TY +LV A + GK+++A + M R
Sbjct: 337 TLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVR 396
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G+V Y L L N R +A+ + ++SL + P ++ I G +
Sbjct: 397 GIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVA-PTAYSYVLFIDYYGKLGDPEK 455
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ F+ MK P+I NA L + +AK++F +
Sbjct: 456 ALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCG------------- 502
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
L PD TY+ M++ + A Q + + M GC+ D L+ +AG+
Sbjct: 503 LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGR 557
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 146/333 (43%), Gaps = 31/333 (9%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
AL++F + +++ P+I Y+ + G+ + EL +L M + K
Sbjct: 807 ALKLF-VEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCK---------- 855
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
P+++ +N +++A V S+ ++ ++ P+ TYG + +L++G+ +
Sbjct: 856 -----PNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSE 910
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ F +M Y +L+ F + G +N A + M + G+ Y L
Sbjct: 911 EAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILV 970
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 485
CL GR DA+ E++K L P +++ +I +++ +S+F MK+
Sbjct: 971 ECLFMTGRVDDAVHYFEELK-LTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGI 1029
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
P + T NA++ + M +A ++FEE F+ L+P+ +TY++++
Sbjct: 1030 SPELYTYNALILHFGNAGMVDQAGKMFEELQ--------FMG-----LEPNVFTYNALIR 1076
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
+ + + V+K M + GC + A L
Sbjct: 1077 GHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 148/360 (41%), Gaps = 35/360 (9%)
Query: 137 DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQM 193
D F K++ HP E+ L+D L +T K M +G +FT +
Sbjct: 776 DKFTKSLGTHPT------PESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLL 829
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFN 252
L D + + L +Y R K + + +++ L K+ ++AL ++
Sbjct: 830 L-------DAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYY 882
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
++ + P Y + L + G +E +K+ E M P + K P
Sbjct: 883 EIISG-DFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEM---PDYQCK------------P 926
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+ +YN ++N + +FK++ K G++P +Y + +E + +G+ D +F
Sbjct: 927 NCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYF 986
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
++ +G ++Y +++ + ++ EA++ M+ RG+ Y L N
Sbjct: 987 EELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNA 1046
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 491
G A + E+++ + +P T+ LI G+ D S+F+ M C PN GT
Sbjct: 1047 GMVDQAGKMFEELQFM-GLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGT 1105
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 167/429 (38%), Gaps = 62/429 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V L+ L KAGR EA ++F L+D L P + Y+ + LG+ G L + + L
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFG-RLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFG 601
Query: 289 RMRQK--PSKRI----------KN--------MHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M++ P + KN M + PD++ YN ++ +
Sbjct: 602 SMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEG 661
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD----LVHEFFRK--MAKSGEAI 382
+ FW + Q++K L P T + +++ G+ + +V EF + + S +
Sbjct: 662 RAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVW 720
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
G L +L+ E +I EA++ + + ++ L LC + DA +
Sbjct: 721 GELMECILI-----EAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLF 775
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR 501
+K + P ++ L+ + + + +F MK+ C PNI T N +L + +
Sbjct: 776 DKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGK 835
Query: 502 NDMFSKAKELFEET-------------------TRANSSG------YTFLSGDGAPLKPD 536
+ + EL+ E ++NS Y +SGD P
Sbjct: 836 SKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGD---FSPT 892
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
TY ++ A + E +++ M C+ + + L+ +AG ++ F
Sbjct: 893 PCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFK 952
Query: 597 SLLEAGEIP 605
+++ G P
Sbjct: 953 RMIKEGIRP 961
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 149/368 (40%), Gaps = 31/368 (8%)
Query: 139 FAKNVEWHPEKRWRSEAEA---------IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFT 189
F + KR+ SE EA +LV+ L + + + + +M G++
Sbjct: 342 FGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPN 401
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
L+ GL + +A+ + + + L + + Y + GK G P +AL
Sbjct: 402 LHTYNTLISGLLNLRRLDEALELFNNMESLGVA---PTAYSYVLFIDYYGKLGDPEKALD 458
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN-MHRKNWDP 308
F M + + P IAA ++ +L ++G ++E +K I N +H
Sbjct: 459 TFEKMKKR-GIMPSIAACNASLYSLAEMGRIRE------------AKDIFNDIHNCG--- 502
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
L PD V YN ++ + Q + ++ G +P ++ + ++G+ D
Sbjct: 503 -LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
+ F ++ A +TY +L+ +EGK+ +A+ +M++ G + L C
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDC 621
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 488
LC N A+ + ++ ++ + P +T+ +I + G + MK P+
Sbjct: 622 LCKNDAVDLALKMFCRM-TIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPD 680
Query: 489 IGTVNAML 496
T+ +L
Sbjct: 681 HVTLYTLL 688
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 84/434 (19%), Positives = 170/434 (39%), Gaps = 66/434 (15%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + G+M + L L + G R+A + + ++ D Y ++ K
Sbjct: 463 MKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPD---SVTYNMMMKCYSK 519
Query: 241 AGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
AG+ +A ++ ML E C PDI +S+ TL + G + E ++ R++
Sbjct: 520 AGQIDKATKLLTEMLSEGCE--PDIIVVNSLIDTLYKAGRVDEAWQMFGRLK-------- 569
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
D L P +V YN ++ + +F +++SG P+ T+ ++ +
Sbjct: 570 -------DLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCL 622
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++ DL + F +M + LTY ++ +EG+ A M ++ +
Sbjct: 623 CKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDH 681
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y L + +GR +DA+ +V + + +GL S+ G + +CI I
Sbjct: 682 VTLYTLLPGVVKDGRVEDAIKIVMEF----------VHQSGLQTSNQVWGELMECILIEA 731
Query: 480 HMKDHCEPNIGTVN-----------AMLKVYSRNDMFSKAKELFEETTRANSSGYT---- 524
+++ G V +++V + AK+LF++ T++ + T
Sbjct: 732 EIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESY 791
Query: 525 -------------------FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
F+ A P+ +TY+ +L+A + + + +Y M
Sbjct: 792 NCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLC 851
Query: 566 SGCQLDQTKHAWLL 579
GC+ + H ++
Sbjct: 852 RGCKPNIITHNIII 865
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 19/230 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G +AM + + + + K + +Y L+ GKAG + A +F M+
Sbjct: 899 LIGGLLKAGRSEEAMKIFEEMPDYQCKPNCA---IYNILINGFGKAGNVNIACDLFKRMI 955
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ + PD+ +Y + L G + + V E ++ L+PD V
Sbjct: 956 KE-GIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG---------------LDPDTV 999
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++N S + + +F +++ G+ P TY + +G D + F ++
Sbjct: 1000 SYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEEL 1059
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
G TY L+R + G + A + + M G A + +L
Sbjct: 1060 QFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 369
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 129/286 (45%), Gaps = 18/286 (6%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D + PD VVYNA+LN + + K F +++ + + G S A++ + M + +G+ D
Sbjct: 18 DSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSVASFNIMMRGLFDNGRVD 76
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
V+ + M K G ++TY +LV F + G IN+++ + E++G V A Y +
Sbjct: 77 EVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDAFAYSAMI 136
Query: 427 CCLCNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DH 484
LC + + A+ V+ IKS KP + LI + +D I +F+ M H
Sbjct: 137 NGLCKETKLEKAISVLNGMIKS--GCKPNTHVYNALINGLIGASKSEDAIRVFREMGITH 194
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
C P I T N ++ +++ F +A +L +E L P TYS ++
Sbjct: 195 CSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKG-------------LTPSVITYSLLM 241
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ H+ E ++ + +G + D H L+ GK L
Sbjct: 242 KGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQL 287
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 198/492 (40%), Gaps = 43/492 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A L+ L + T+ V R M + G + LLKGL D+
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRS 179
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + Y +L K G +A ++ ML D + PD+
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEML-DRGILPDVVT 238
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ L + + + ++++ M +KN + PD + YN++L+
Sbjct: 239 YSSIIAALCKAQAMDKAMEVLNTM-------VKNG--------VMPDCMTYNSILHGYCS 283
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
S Q K K++R G++P+ TY M + ++G+ + F M K G T
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 343
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y+ L++ + +G + E A + M + G+ V+ L C + AMLV K++
Sbjct: 344 YRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403
Query: 447 SLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 504
+H + G +I + G +DD + F+ M D PNI +++ D
Sbjct: 404 --QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 505 FSKAKEL-FEETTRANSSGYTFLSG-------DG--------------APLKPDEYTYSS 542
+ KA+EL E R F + +G +KPD TY++
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
+++ A + + + M G + D + L+ R + F ++ +G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 603 EIPHPLFFTEML 614
P+ + + +L
Sbjct: 582 VSPNIITYNIIL 593
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 174/423 (41%), Gaps = 40/423 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M +L G G ++A+ L ++
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK---MR 298
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ Y+ L+ L K GR EA +IF+ M + L PDIA Y ++ G L
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGAL 357
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M ++N ++PD V+N ++ A + VF ++
Sbjct: 358 VEMHALLDLM-------VRNG--------IQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R+ GL P+ YG ++V+ +SG D +F +M G + Y L+ K
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEIT 457
++A + M RG+ + + C GR ++ EK+ L KP IT
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIIT 518
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+ LI G +D+ + M +P+I T ++ Y R A LF+E
Sbjct: 519 YNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMV 578
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
SSG + P+ TY+ +L+ + + +Y + SG QL+ + +
Sbjct: 579 ---SSG----------VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625
Query: 577 WLL 579
+L
Sbjct: 626 IIL 628
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 19/215 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL W +A + + + D+ + + ++ K GR E+ ++F+LM+
Sbjct: 452 LIHGLCTCDKWDKAE---ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PDI Y+++ G + E KL+ M K PD+V
Sbjct: 509 R-IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK---------------PDIV 552
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++N + +FK++ SG+ P+ TY + ++ + + + E + +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
KSG + TY +++ + +EA+ +N+
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 120/297 (40%), Gaps = 20/297 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TY + + ++G+ DL + K G
Sbjct: 65 VARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFR 124
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+T+ L++ + + ++A+ V R M + G + Y L LC+ R Q+A+
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE 184
Query: 441 VVEKIKSLR--HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
++ + R S P +++ ++ G D S + M D P++ T ++++
Sbjct: 185 LLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA 244
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
+ KA E+ + + PD TY+S+L ++ Q +
Sbjct: 245 ALCKAQAMDKAMEVLNTMVKNG-------------VMPDCMTYNSILHGYCSSGQPKEAI 291
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
K M G + + ++ L+ + G+ FDS+ + G P + +L
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 348
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 192/483 (39%), Gaps = 53/483 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
V++ L + + F M GL FT G L+ GL G ++A ++LD +
Sbjct: 285 VMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA---LMNGLCKGGRLKEAKALLDEM 341
Query: 217 Y--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
GLK + VY L+ K G+ EA I N M+ + P+ Y ++ L
Sbjct: 342 SCSGLK-----PNVVVYATLVDGFMKEGKAAEAFDILNEMIS-AGVQPNKIMYDNLIRGL 395
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
++G L KL+ M IK HR PD Y+ ++ + G F
Sbjct: 396 CKIGQLGRASKLLNEM-------IKVGHR--------PDTFTYHPLMQGHFQHYDKDGAF 440
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+ ++R SG+ P+A TYG+ + + Q+G+ +M G A Y L+
Sbjct: 441 ELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 500
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+EG I+ A ++ NM + V+ Y L L GR ++A +++ R P
Sbjct: 501 SKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQK-RGLVPD 559
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
E T++GLI +++ + Q M + +PN T +L+ Y +++ K + +
Sbjct: 560 EFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619
Query: 514 ETTRANSSGYTFLSG----------------------DGAPLKPDEYTYSSMLEASATAH 551
+ + G + L PD + YSS++
Sbjct: 620 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMA 679
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
E + MA G + + L+ R+G + FDS+L G +P+ + +T
Sbjct: 680 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYT 739
Query: 612 EML 614
++
Sbjct: 740 ALI 742
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 137/342 (40%), Gaps = 24/342 (7%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN +++ S + F +++ GL P A TYG M + + G+ +
Sbjct: 281 VTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDE 340
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M+ SG + Y LV F +EGK EA + M GV +Y L LC G+
Sbjct: 341 MSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQ 400
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
A ++ ++ + H +P T+ L+ D + M++ PN T
Sbjct: 401 LGRASKLLNEMIKVGH-RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYG 459
Query: 494 AMLKVYSRNDMFSKAKELFEETT----RANSSGYTFL----SGDG--------------A 531
M+ +N +A L EE + N+ Y L S +G A
Sbjct: 460 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKA 519
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
+ PD + Y+S+++ +T + E E Y + G D+ ++ L+ +
Sbjct: 520 NVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKA 579
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ +L +G P+ +T++L +++EK +++ +M
Sbjct: 580 DQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM 621
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 123/310 (39%), Gaps = 26/310 (8%)
Query: 333 VFWVFKQ-LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+ W K + +G+ P TY +E ++ +D + F +M + A+ +TY V++
Sbjct: 228 LVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMI 287
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
G + EA M G+ A Y L LC GR ++A +++++ S
Sbjct: 288 SGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM-SCSGL 346
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
KP + + L+ M G + I M +PN + +++ + +A +
Sbjct: 347 KPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASK 406
Query: 511 LFEETTRANSSGYTF-----LSG-------DGA----------PLKPDEYTYSSMLEASA 548
L E + TF + G DGA + P+ YTY M+
Sbjct: 407 LLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLC 466
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + + + M G + + +A L++ S+ G L + +++ +A +P L
Sbjct: 467 QNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPD-L 525
Query: 609 FFTEMLIQAI 618
F LI+ +
Sbjct: 526 FCYNSLIKGL 535
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 86/215 (40%), Gaps = 7/215 (3%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PDL +Y+++++ + + ++ K GL+P Y ++ +SG
Sbjct: 661 LVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 720
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F + G +TY L+ + G I +A ++M RG+ A VY LA
Sbjct: 721 NVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGC 780
Query: 430 CNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
+ + A+ + E++ + H F+ L+ G + + + M D
Sbjct: 781 SDAADLEQALFLTEEMFNRGYAHVS----LFSTLVRGFCKRGRLQETEKLLHVMMDREIV 836
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
PN TV ++ + + +A +F E + +S
Sbjct: 837 PNAQTVENVITEFGKAGKLCEAHRVFAELQQKKAS 871
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 1/202 (0%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD +Y V+ S + F V ++ K+GL P Y + + + +
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+MAK G G + Y L+ F G I+ A ++ +G++ Y L C
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIG 490
NG DA + + + R P + L D ++ + + + M + ++
Sbjct: 747 KNGDITDAFDLYKDMLD-RGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVS 805
Query: 491 TVNAMLKVYSRNDMFSKAKELF 512
+ +++ + + + ++L
Sbjct: 806 LFSTLVRGFCKRGRLQETEKLL 827
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 8/166 (4%)
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
F+ G G P PD YTYS+ LEA A ++ + V++ M C +++ + ++ R
Sbjct: 235 FMEGAGIP--PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292
Query: 585 AGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
+G +E AF + +++ G P + ++ ++A AL++ M+ +
Sbjct: 293 SGA---VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPN 349
Query: 642 ERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 687
+ L + + +LN + + ++I NL R L
Sbjct: 350 VVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGL 395
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 25/299 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G + + A S+L + K D+ Y L+ L KAGR EA ++ M
Sbjct: 158 LISGCCREKNLEMADSLLQTMAASGVKADV---VTYNTLMDGLCKAGRLQEAEQLLERMK 214
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
PD+ AY S L + G + +++E+MR D +P++V
Sbjct: 215 AS-GCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMR---------------DSDHDPNVV 258
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN +L+ S + + +Q+ S G + Y ++ + + G+
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
MA++G +TY LV + GKI EAV AVR M G A Y L LC+ GR
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378
Query: 435 WQDAMLVVEKIKSLR----HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+A +VE++ S H P T+ LI G IDD + FQ M+ C+P+
Sbjct: 379 LAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPD 437
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 169/391 (43%), Gaps = 36/391 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ L+ K GRP + R+ M + P++ +Y+ GLL+ L KL E
Sbjct: 11 VTFNALVNGFSKQGRPGDCERLLETMAAR-GIQPNVVSYN---------GLLEGLCKL-E 59
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R + + +++M + PDLV Y+ +L+ + + + + K++ GL+P
Sbjct: 60 RWHEA-EELVRDMISRGGRST--PDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPD 116
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A Y M + +S + E +M ++G +T+ L+ E + A + ++
Sbjct: 117 ALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ 176
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M GV Y L LC GR Q+A ++E++K+ P + ++ +
Sbjct: 177 TMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA-SGCAPDVVAYSSFVYGLCKS 235
Query: 469 GHIDDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G + + + + M+D H +PN+ T N +L ++ A E+ E+ ++ G +
Sbjct: 236 GKVLNAHQVLEQMRDSDH-DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
YS++++ + + V + MA +GC+ D ++ L+ +AG
Sbjct: 295 G------------YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Query: 587 KCHLLEHAFDSLLEA---GEIPHPLFFTEML 614
K +E A +++ E G P+ + + ++
Sbjct: 343 K---IEEAVEAVREMAMEGCKPNAVTYCSLV 370
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/430 (19%), Positives = 166/430 (38%), Gaps = 65/430 (15%)
Query: 196 LLKGLGDKGSWRQAMSVL-DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
LL+GL W +A ++ D + + R Y+ LL+ KAG+ E+ + +
Sbjct: 51 LLEGLCKLERWHEAEELVRDMIS--RGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEV 108
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ L PD Y V +L + + + ++ M R P L
Sbjct: 109 ISR-GLRPDALMYTKVMASLCK-----------SARLGEALELLEEMIRAGCCPTL---- 152
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ +N +++ C + + + + SG+K TY M+ + ++G+ + +
Sbjct: 153 ITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLER 212
Query: 375 M-------------------AKSGEAIGA----------------LTYKVLVRAFWEEGK 399
M KSG+ + A +TY ++ + GK
Sbjct: 213 MKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK 272
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
I+ A+ + M G V Y LC GR Q+A V+E + + +P +T+
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM-ARAGCRPDVVTY 331
Query: 459 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
+ L+ G I++ + + M + C+PN T +++ ++A+ + EE +
Sbjct: 332 SSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSS 391
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
GD P P TY++++ A + + ++ M GC D ++
Sbjct: 392 GGG------GGDHCP--PSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443
Query: 578 LLVEASRAGK 587
++ +R+G+
Sbjct: 444 IVEGLARSGR 453
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 55/296 (18%), Positives = 122/296 (41%), Gaps = 17/296 (5%)
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
++G P++ T+ + + G+ MA G ++Y L+ + + +
Sbjct: 3 RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH 62
Query: 402 EAVAAVRNMEQRGVVGTASV--YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
EA VR+M RG T + Y L C G+ +++ +++++ S R +P + +T
Sbjct: 63 EAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVIS-RGLRPDALMYT 121
Query: 460 GLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
++ S + + + + + M + C P + T N ++ R A L + T A
Sbjct: 122 KVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ--TMA 179
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
S +K D TY+++++ A + + E + + M SGC D ++
Sbjct: 180 ASG-----------VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSF 228
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ ++GK + + ++ P+ + + +L + A+ ++ MA
Sbjct: 229 VYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ ++ L K GR EA + M PD+ Y S+ L + G ++E V+ + M
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARA-GCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG-----L 345
+ K P+ V Y ++++ + + +++ G
Sbjct: 355 AMEGCK---------------PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHC 399
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
PS +TY + + ++G+ D +FF++M G ++Y +V G+ +A
Sbjct: 400 PPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 153/343 (44%), Gaps = 51/343 (14%)
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
N D+ Y + L GL E+ K+I+ M + P+ I +L +V
Sbjct: 90 NFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNK 149
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
A+ VF Q++ KP+A+TY + +++Q G ++ +HE + +M
Sbjct: 150 AL--------------SVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNE 195
Query: 379 GEAI-GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
G+ +TY VLV AF + G+ + A+ M+ G+ TA +Y L +G +
Sbjct: 196 GDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EK 254
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
A+ +V+++K + P T+T LI G ++D S+F +M KD C+P++ +N ++
Sbjct: 255 ALGLVQEMKD-KGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLI 313
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-------SAT 549
++ + A +LF++ + P+ TY+++++A ++
Sbjct: 314 NIFGKAGRLEDALKLFDQMRSLKCA-------------PNVVTYNTVIKALFESKAPASE 360
Query: 550 AHQWEYFE-----------YVYKGMALSGCQLDQTKHAWLLVE 581
A W FE + Y + C+ ++ + A LL+E
Sbjct: 361 AASW--FEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLE 401
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 155/359 (43%), Gaps = 43/359 (11%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
L V +KDK + F YT+L+ LGK+GR +A +F ML+D PD+ +++
Sbjct: 256 LGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKD-GCKPDVVLINNLIN 314
Query: 273 TLGQVGLLKELVKLIERMR---------------------QKPSKRIKNMHRKNWDPVLE 311
G+ G L++ +KL ++MR + P+ + K +
Sbjct: 315 IFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVT 374
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P Y+ +++ +++ + + +++ + G P A Y + + ++ +Y+ +E
Sbjct: 375 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 434
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F ++ ++ A Y V+++ + G+ +EAV M++ G Y L L
Sbjct: 435 FLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVR 494
Query: 432 NGRWQDAMLVVEKIKSLRHSKPL---EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
G ++A + ++ + L I GL + G + +F MKD +P
Sbjct: 495 AGMIEEAFSALRTMEENGCTPDLNSHNIILNGLART----GRPEQATEMFMKMKDSLIKP 550
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ + N +L SR+ MF +A +L E S G+ + D TYSS+LEA
Sbjct: 551 DAVSYNTILGSLSRSGMFEEAAKLMREM---GSRGFEY----------DHITYSSILEA 596
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/547 (18%), Positives = 219/547 (40%), Gaps = 44/547 (8%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQS-G 185
+D ++ + +F +W ++R + + L+ L + + + WK ++ M +S
Sbjct: 71 IDVEINVKIQFF----KWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPT 126
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
+ + +++K LG +A+SV Y +K ++ + Y ++ +L + G
Sbjct: 127 CVIGPADLSEVVKILGKAKMVNKALSVF---YQIKSRKCKPTASTYNSMILMLMQEGHHE 183
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRI---- 298
+ +++ M + + +PD Y + ++G ++L + M+ P+ +I
Sbjct: 184 KIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTL 243
Query: 299 -----KNMHRKNWDPVLE-------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
K+ K V E P + Y ++ S + + + VF + K G K
Sbjct: 244 LAIYFKSGDEKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCK 303
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVA 405
P + + ++G+ + + F +M A +TY +++A +E + +EA +
Sbjct: 304 PDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAAS 363
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
M+ GV ++ Y L C R + A+L++E++ + P + LI +
Sbjct: 364 WFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDE-KGFPPCPAAYCSLINAL 422
Query: 466 MDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ +F +K++C + + A M+K + S+A +LF E + +
Sbjct: 423 GKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCN--- 479
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
PD Y Y++++ A E + M +GC D H +L +R
Sbjct: 480 ----------PDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLAR 529
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
G+ F + ++ P + + +L +E+A L+ M F
Sbjct: 530 TGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHIT 589
Query: 645 WTELFES 651
++ + E+
Sbjct: 590 YSSILEA 596
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 24/244 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 382 ILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF---LEL 438
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVG 278
K+ S +Y ++ LGK GRP EA+ +FN M + CN PD+ AY+++ L + G
Sbjct: 439 KENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCN--PDVYAYNALMSGLVRAG 496
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+++E + M + PDL +N +LN + + + +F
Sbjct: 497 MIEEAFSALRTMEENGCT---------------PDLNSHNIILNGLARTGRPEQATEMFM 541
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+++ S +KP A +Y + + +SG ++ + R+M G +TY ++ A G
Sbjct: 542 KMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAV---G 598
Query: 399 KINE 402
K++E
Sbjct: 599 KVDE 602
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 183/453 (40%), Gaps = 50/453 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT ++ L R HEA + M NL P++ Y + L + G + E V L+
Sbjct: 47 YTYTAVIHALCVENRLHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALLS 105
Query: 289 RMRQK--PSKRIKN----------MHRKNWDPVLE-------PDLVVYNAVLNACVPSHQ 329
+MR+K P+ N + +D + E PD+ Y ++ S +
Sbjct: 106 KMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 165
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-GALTYK 388
VF+QL G +P TY ++ + + G+ + F +M KSG + +TY
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ F GK++EA+ + M + G Y L C R DA ++ ++ +
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM-TR 284
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ P +TFT L+ + D + I M + C P + T N +L Y R + +
Sbjct: 285 KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344
Query: 508 AKELFEETTRANSSGYTF-----------LSGDGAPL---------KPDEYTYSSMLEAS 547
A++ E + +F S + L PD Y+++++
Sbjct: 345 ARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 548 ATAHQWEYFEYVYKGMALS-GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ + VY+ M GC + ++ L+ AG +L+ A +E G +P+
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAG---MLDRA-RGYIEKGCVPN 460
Query: 607 PLFFTEMLIQAIVQSNY-EKAVALINAMAYAPF 638
+ +LI A ++N E A L++ M F
Sbjct: 461 IGTY-NLLIDAFRKANRDEDARELLDDMVQRGF 492
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/398 (18%), Positives = 160/398 (40%), Gaps = 36/398 (9%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
K+ A L+ L + E ++ + + M SG + L+ G
Sbjct: 109 KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDD 168
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+ V + + + D+ + Y+ L+ L K GR EA+ +F M++ + P+ Y+
Sbjct: 169 ALRVFEQLVARGFRPDVVT---YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKR------------------------IKNMHRK 304
S+ ++G + E + L+ERM + S + M RK
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
L PD+V + ++++ ++ + ++R+ P+ TY ++ ++ +
Sbjct: 286 G----LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
+ +F + + +++ +++R + + +EA+ V +R +Y
Sbjct: 342 LEEARKFMLEEMDCPPNV--VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
+ LC + +A V K+ P IT++ LI + G +D +++
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLD---RARGYIEKG 456
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
C PNIGT N ++ + + + A+EL ++ + G
Sbjct: 457 CVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGG 494
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 134/335 (40%), Gaps = 29/335 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ Y AV++A ++ +++ L P+ TY + ++ + + G+ D
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K A+TY L+ + + +EA + M G + Y L C
Sbjct: 104 LSKMRKKCVPT-AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNI 489
+ + DA+ V E++ + R +P +T++ LI G + + I +F M C PN
Sbjct: 163 SKKSDDALRVFEQLVA-RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSG-----YTFLSG-------DGA------ 531
T N+++ + R +A L E SS T ++G D A
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281
Query: 532 ----PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
L PD T++S+++ ++ ++ M C + +L RA +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
LE A +LE + P + ++I+ + + N
Sbjct: 342 ---LEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN 373
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 25/327 (7%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D V Y +++ + + ++ G P TY + + + +F
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+MA +TY VL+ + G+++EAVA + M ++ V TA Y L LC
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKA 128
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGT 491
R +A ++E++ P T+T LI DD + +F+ + P++ T
Sbjct: 129 ERASEAYDLLEEM-VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+ ++ + +A +LF ++ S P+ TY+S++
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSC------------MPNTVTYNSLISGFCRMG 235
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL--LEHAFDSL---LEAGEIPH 606
+ + + + MA +G D + L+ G C L L+ A+D L G P
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLM-----NGFCKLARLDDAYDLLNQMTRKGLTPD 290
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAM 633
+ FT ++ ++ AV ++ M
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEM 317
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/322 (19%), Positives = 133/322 (41%), Gaps = 21/322 (6%)
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+TY L++ + ++ +A+ + M +G Y + LC R +A +E+
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDM 504
+ + R+ P +T+T LI GG +D+ +++ M+ C P T N+++ + +
Sbjct: 72 MAN-RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAER 130
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
S+A +L EE + PD +TY++++ + + + V++ +
Sbjct: 131 ASEAYDLLEEMVYSGCI-------------PDIFTYTTLITGFCKSKKSDDALRVFEQLV 177
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE-IPHPLFFTEMLIQAIVQSNY 623
G + D ++ L+ + G+ F ++++G +P+ + + ++
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237
Query: 624 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNL 683
++A+ L+ MA +T L D LLN + +T ++L
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297
Query: 684 SRALHALCRSEKERDLSSSAHF 705
+ LCR E LS + H
Sbjct: 298 ---MDGLCR---ENRLSDAVHI 313
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+ + M + GL L+ GL + A+ +L ++ K + + Y +
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGE---MRRKSCSPTVYTYNTI 332
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
L +A + EA + MLE+ + P++ +++ + L +V E ++L+E R++
Sbjct: 333 LDGYCRANQLEEARK---FMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR- 388
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF-KQLRKSGLKPSAATYG 353
R N PD+V+Y V++ + V+ K L + G P++ TY
Sbjct: 389 --------RCN------PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYS 434
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + +G D + K G TY +L+ AF + + +A + +M QR
Sbjct: 435 TLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490
Query: 414 GVVGTAS 420
G G S
Sbjct: 491 GFGGVQS 497
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 119/588 (20%), Positives = 224/588 (38%), Gaps = 90/588 (15%)
Query: 135 GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKN------------WKFVRI-- 180
S Y A E+ R+R R +VD + + N WK V +
Sbjct: 185 ASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLV 244
Query: 181 --MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAIL 238
M + G+ L+ +G +R+A + D + + D + + LL +
Sbjct: 245 DSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPD---KVTFNSLLDVY 301
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR---QKP- 294
GKA R EA+ + M E+ P + Y+S+ + GLL+E ++L + M KP
Sbjct: 302 GKARRHEEAIGVLKKM-ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPD 360
Query: 295 ----SKRIKNMHR-KNWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ I + R D L P+L YNA++ ++ + VF
Sbjct: 361 VVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFD 420
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
LR +G P T+ + V Q+G V F++M K+G TY L+ ++ G
Sbjct: 421 DLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG 480
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
++A+ + M + G+ S Y + L GRW A + +++ R KP E+++
Sbjct: 481 LFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMED-RDCKPDELSY 539
Query: 459 TGLIISSMDGGHIDDCISI-----------------------------------FQHM-K 482
+ L+ + + +D ++ FQ + +
Sbjct: 540 SSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRR 599
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
C +I +NAM+ +Y +N M K +E+ + NS ++ TY+S
Sbjct: 600 RRCSLDINVLNAMVSIYGKNKMVKKVEEVL-TLMKENSINHS------------AATYNS 646
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
++ + E E + + SG + D+ + ++ R G+ F + +G
Sbjct: 647 LMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 706
Query: 603 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
P + + + + +E+A+ L+ + ER + + E
Sbjct: 707 VKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILE 754
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 153/350 (43%), Gaps = 39/350 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD +AY ++ + G ++ V + RM D ++P LV YN VL
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRM---------------VDGGVQPALVTYNVVL 227
Query: 322 NA----CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
+ VP WK V + +++ G++ TY + + G Y + F +M
Sbjct: 228 HVYSKMSVP---WKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKA 284
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+G +T+ L+ + + + EA+ ++ ME G + Y L +G ++
Sbjct: 285 AGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEE 344
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHM-KDHCEPNIGTVNAM 495
A+ + ++++ R KP +T+T L IS +D G ID ++ + M ++ C PN+ T NA+
Sbjct: 345 ALELKQEME-FRGMKPDVVTYTTL-ISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNAL 402
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
+K++ F++ +F++ S+GY PD T++++L
Sbjct: 403 IKMHGVRGKFTEMMIVFDDL---RSAGYV----------PDVVTWNTLLAVFGQNGLDSE 449
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
V+K M +G ++ + L+ SR G + ++EAG P
Sbjct: 450 VSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYP 499
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 123/315 (39%), Gaps = 35/315 (11%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ R Y L++ + G +A+ I+ M+E +YPDI+ Y++V L + G +
Sbjct: 463 IPERDTYVSLISSYSRCGLFDQAMEIYKRMIE-AGIYPDISTYNAVLSALARGGRWVQAE 521
Query: 285 KLIERMRQKPSK--------------------RIKNMHRKNWDPVLEP------DLVVYN 318
KL M + K ++K + + +EP LV+ N
Sbjct: 522 KLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVN 581
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+N+ + + F++LR+ + + ++ V E M ++
Sbjct: 582 NKVNSLSETEK------AFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKEN 635
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
A TY L+ + G + A + ++ G+ Y + G+ ++A
Sbjct: 636 SINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEA 695
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
+ ++K KP +T+ I S + ++ I + +++ C+PN T N++L+
Sbjct: 696 SRLFSEMKC-SGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILE 754
Query: 498 VYSRNDMFSKAKELF 512
Y R+ +AK
Sbjct: 755 GYCRHGRMVEAKSFL 769
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 48/103 (46%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN V+ A Q K +F +++ SG+KP TY + ++ + + ++
Sbjct: 672 MRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAI 731
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ R + G TY ++ + G++ EA + + N+ +
Sbjct: 732 DLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPK 774
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 108/492 (21%), Positives = 201/492 (40%), Gaps = 41/492 (8%)
Query: 107 NLKRENLRELKEMFEKDLNWVL--DDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDR 164
NLK EN + + E D+ L + D+ L +YF K ++ ++++++
Sbjct: 29 NLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIAN---SKSFKHTPLTYQMMIEK 85
Query: 165 L-SEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKR 223
L SEREM + ++ M G+ +E + ++ GS QA+ Y ++D R
Sbjct: 86 LASEREMDCVQY-LLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTF---YRMQDFR 141
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
+ +Y +L L R I++ M +D + P++ Y+ + L + +
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKD-GMEPNVFTYNILLKALCKNNRVDGA 200
Query: 284 VKLIERMRQKPS---------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
KL+ M K K K + P + VYNA++N +
Sbjct: 201 HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEY 260
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
++ F + ++ G+ P+ +Y + + +G +L KM G + T+
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L++ F+ +G +EA+ M + GVV Y L LC+ DA+ V +++ +
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME-I 379
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
P T++ LI G +D ++ M H C PN+ M+ V RN MF++
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A L E N P+ T+++ ++ + + ++ V+ M SG
Sbjct: 440 AYCLIENMQVENC-------------PPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG 486
Query: 568 CQLDQTKHAWLL 579
C + T + LL
Sbjct: 487 CFPNTTTYNELL 498
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/354 (18%), Positives = 163/354 (46%), Gaps = 23/354 (6%)
Query: 283 LVKLIERMRQKPS--KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ +I R+ S + +K +R D ++P + +YN +L+A + ++++ + ++ +
Sbjct: 114 FISVIGSYRRAGSSEQALKTFYRMQ-DFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+K G++P+ TY + ++ + ++ + D H+ +M+ G ++Y L+ + + GK+
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
EA R + + VY L +C +++A +++++ + + P I++T
Sbjct: 233 KEA----RELAM-SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMN-KGIDPNVISYTT 286
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+I + D G+++ +++ M C PN+ T +++K + +A + ++ R
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ P+ Y++++ + V+ M ++GC + ++ L+
Sbjct: 347 -------------VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++AG ++ ++ G P+ + +T M+ S + +A LI M
Sbjct: 394 DGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 124/303 (40%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL K S A+SV + ++ + Y+ L+ KAG A ++N M+
Sbjct: 357 LMHGLCSKRSLGDAVSVFNQ---MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+P++ AY + L + + + LIE NM +N P+ V
Sbjct: 414 TH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIE-----------NMQVENC----PPNTV 457
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N + S + VF Q+ SG P+ TY ++ +L+ ++ + M
Sbjct: 458 TFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM 517
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G + +TY ++ + G + EA+ + M RG A + C G+
Sbjct: 518 EHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ +++++ + + P I +T LI +++ I + M + PN+ T N
Sbjct: 578 NIAIQLMDRLSAGKW-HPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNV 636
Query: 495 MLK 497
+++
Sbjct: 637 LVR 639
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 115/557 (20%), Positives = 229/557 (41%), Gaps = 43/557 (7%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M + G + LLKGL D+
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRS 174
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + YT ++ K G +A ++ ML D + PD+
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML-DRGILPDVVT 233
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+S+ L + + + ++++ M +KN + PD + YN++L+
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTM-------VKNG--------VMPDCMTYNSILHGYCS 278
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
S Q K K++R G++P TY L M+ + ++G+ + F M K G T
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L++ + +G + E + M + G+ V+ L C N G+ AMLV K++
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMR 398
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 505
+ P +T+ +I G ++D + F+ M D P N+++ + +
Sbjct: 399 Q-QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+A+EL E T ++S++++ + E +++ M
Sbjct: 458 ERAEELILEMLDRGICLNTIF-------------FNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G + + + L+ AGK ++ G P+ + ++ ++ S E
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 626 AVALINAM---AYAPFHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVS 681
A+ L M +P IT + LF++ +++ ++ + ++I +S
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI-------TESGTQIELS 617
Query: 682 NLSRALHALCRSEKERD 698
+ LH LC+++ D
Sbjct: 618 TYNIILHGLCKNKLTDD 634
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 119/285 (41%), Gaps = 20/285 (7%)
Query: 337 FKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ ++ ++G + P TYG+ + ++G+ DL + K G + A+ + L++
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 394 FWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR--H 450
+ + ++A+ V R M + G + Y L LC+ R Q+A+ ++ + R
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
S P +++T +I G D S + M D P++ T N+++ + KA
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
E+ + + PD TY+S+L ++ Q + K M G +
Sbjct: 252 EVLNTMVKNG-------------VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVE 298
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
D ++ L+ + G+C FDS+ + G P + +L
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 101/520 (19%), Positives = 195/520 (37%), Gaps = 113/520 (21%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M +L G G ++A+ L +
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ + Y+ L+ L K GR EA +IF+ M + L P+I Y ++ G L
Sbjct: 297 VEPDVVT---YSLLMDYLCKNGRCMEARKIFDSMTKR-GLKPEITTYGTLLQGYATKGAL 352
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M + + PD V++ ++ A + VF ++
Sbjct: 353 VEMHGLLDLMVRNG---------------IHPDHYVFSILICAYANQGKVDQAMLVFSKM 397
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF-----W 395
R+ GL P+A TYG + ++ +SG+ + +F +M G + G + Y L+ W
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 396 E------------------------------EGKINEAVAAVRNMEQRGVVGTASVYYEL 425
E EG++ E+ M + GV Y L
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 484
C G+ +AM ++ + S+ KP +T++ LI ++D + +F+ M+
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSV-GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 485 CEPNIGTVNAMLK-------------VYSR----------------------NDMFSKAK 509
P+I T N +L+ +Y R N + A
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 510 ELFE----------------------ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++F+ + R + + F++ L P+ +TY M E
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
E + ++ M +GC +D +++ E + G+
Sbjct: 697 IGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 166/381 (43%), Gaps = 35/381 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V L+ +L K + +A +F+ ++ ++P + +Y+ + L ++ ++L E
Sbjct: 762 VMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFED 821
Query: 290 MR-----------------QKPSKRIK---NMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
M+ SKRI +++ + EP+ + +N +++A V S+
Sbjct: 822 MKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
++ +L P+ TYG ++ +L++G+ + + F +M G ++ Y +
Sbjct: 882 LNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNI 941
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ F + G+I+ A + M + G+ Y L CLC GR +A+ E++K L
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK-LT 1000
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 508
P +++ +I +D+ +S+F MK+ P++ T NA++ A
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVA 1060
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+++EE L+P +TY++++ + + + V+K M + GC
Sbjct: 1061 VKMYEELQLVG-------------LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGC 1107
Query: 569 QLDQTKHAWLLVEASRAGKCH 589
+ A L + RAG H
Sbjct: 1108 SPNTETFAQLPNKYPRAGLVH 1128
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 196/474 (41%), Gaps = 53/474 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ +L G +EAL+++ M+ + + P + Y ++ V LG+ G ++++ L+E
Sbjct: 202 YSYNGLIHLL-LPGFCNEALKVYKRMISE-GMKPSMKTYSALMVALGRRGDTRKIMNLLE 259
Query: 289 RMRQ---KP--------------SKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M+ +P ++RI + + ++ D PD++ Y +++A +
Sbjct: 260 EMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAG 319
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ ++ ++R S P TY M+ + G + V F+ +M G A +TY
Sbjct: 320 KLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYT 379
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+L+ A + G ++ A + M +G+ Y + C L R +A+ ++E ++SL
Sbjct: 380 ILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESL 439
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
KP ++ I G I F+ MK P+I NA L + S+
Sbjct: 440 -GVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISE 498
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A+++F + + L PD TY+ +++ + A Q + + M G
Sbjct: 499 AEDIFNDLHKCG-------------LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKG 545
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
C+ D L+ +AG+ F L P + + +L + KA+
Sbjct: 546 CEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKAL 605
Query: 628 ALINAMAYA---PFHITERQWTELFESNEDRISR-DKLEKLLNALC-----NCN 672
L +M + P IT F S D +S+ D ++ L C NCN
Sbjct: 606 ELFGSMTESGCPPNTIT-------FNSLLDCLSKNDAVDLALKMFCRMTMMNCN 652
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 152/749 (20%), Positives = 267/749 (35%), Gaps = 113/749 (15%)
Query: 137 DYFAKNVEWHPEKRWRSEAEA---------IRVLVDRLSEREMTAKNWKFVRIMNQSGLM 187
D F K + KR+ +E E +L++ L + + + + +M G+
Sbjct: 348 DKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIF 407
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
++ GL +A+ +L+ + L K + F Y + GK+G P +A
Sbjct: 408 PNLHTYNTMICGLLKARRLDEALELLENMESLGVK---PTAFSYVLFIDYYGKSGDPAKA 464
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRK 304
+ F M + + P IAA ++ TL + G + E + + + P NM K
Sbjct: 465 IDTFETMKKR-GIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMK 523
Query: 305 NWDPV-----------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ EPD+++ N+++N + + + +F +L+ L P
Sbjct: 524 CYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAP 583
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + + + + GK E F M +SG +T+ L+ + N+AV
Sbjct: 584 TVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSK----NDAVDLA 639
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M R ++ + P +T+ +I +
Sbjct: 640 LKMFCR--------------------------------MTMMNCNPDVLTYNTIIYGLIR 667
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G ID F MK P+ T+ ++ R+ A ++ E
Sbjct: 668 EGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQ--------- 718
Query: 528 GDGAPLKPDEYTYSSMLEASAT-AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
A L+ + + ++E T A E + + S CQ D + V R
Sbjct: 719 ---ACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRK- 774
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAMAYAPFHITERQW 645
K ++ FD + I L L+ ++ SN+ EKA+ L M A H +
Sbjct: 775 KALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTY 834
Query: 646 TELFESNEDRISRDKLEKLLNAL----CNCNAASSEITVSNLSRALHALCRSEKERDLSS 701
L +++ +KL L + + C NA + I +S L ++ + K DL
Sbjct: 835 NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNL----NKALDL-- 888
Query: 702 SAHFGSQAIDISPLHGIHEAFDVKETENVPSSSASMMFENA-DLGADPLPQKTDVAVDID 760
++ + D SP + + S A +FE D G P V +I
Sbjct: 889 --YYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGP----NSVIYNI- 941
Query: 761 SINHSSLSRQADADTEMFSKALSYIHSNDRPS--NLCIDMEGLADDWASSEHSDYLDKEL 818
IN S + D E+F K + RP + I +E L E Y ++
Sbjct: 942 LINGFGKSGEIDFACELFKKM---VKEGIRPDLKSYTILVECLCITGRIDEAVQYFEE-- 996
Query: 819 AALYLSKQSQDNDVVDLQKSMNRVGGSRR 847
L D D V +N +G SRR
Sbjct: 997 ----LKLTGLDPDTVSYNFIINGLGKSRR 1021
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 118/300 (39%), Gaps = 16/300 (5%)
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+VF ++K + + TY + + G RKM + G + A +Y L+
Sbjct: 152 FVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLL 211
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
G NEA+ + M G+ + Y L L G + M ++E++KS+ +P
Sbjct: 212 L-PGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSI-GLRPN 269
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
T+T I + IDD IF+ M D C P++ T ++ KAKEL+
Sbjct: 270 IYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYV 329
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
+ RA+S PD TY ++++ E + + M + G D
Sbjct: 330 K-MRASSH------------SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVV 376
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ L+ ++G D + G P+ + M+ + ++A+ L+ M
Sbjct: 377 TYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENM 436
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 19/212 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G G A + + + DLKS YT L+ L GR EA++ F L
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKS---YTILVECLCITGRIDEAVQYFE-EL 997
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L PD +Y+ + LG+ L E + L M+ + + PDL
Sbjct: 998 KLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG---------------ISPDLY 1042
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNA++ + + ++++L+ GL+PS TY + SG D F+KM
Sbjct: 1043 TYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
G + T+ L + G ++ AV
Sbjct: 1103 MVVGCSPNTETFAQLPNKYPRAGLVHNPFGAV 1134
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 90/247 (36%), Gaps = 49/247 (19%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE---------------- 256
LD Y L + Y L+ L KAGR +A++IF ML+
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945
Query: 257 ---------DCNLY---------PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
C L+ PD+ +Y + L G + E V+ E ++
Sbjct: 946 FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG---- 1001
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
L+PD V YN ++N S + +F +++ G+ P TY +
Sbjct: 1002 -----------LDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILH 1050
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ +GK D+ + + ++ G TY L+R G ++A + + M G
Sbjct: 1051 LGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPN 1110
Query: 419 ASVYYEL 425
+ +L
Sbjct: 1111 TETFAQL 1117
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 123/583 (21%), Positives = 225/583 (38%), Gaps = 94/583 (16%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLL------KGLGDKGSWRQAM 210
A L+ LS MTA +M++ M +EG LL L G+ A
Sbjct: 182 AYSALLIHLSRLGMTAA------VMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 235
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE---ALRIFNLML-EDCNLYPDIAA 266
+++ V+ + D F YT + ILG R H+ AL++FN M E C P+
Sbjct: 236 TIMKKVFESEMSPD---TFTYTSM--ILGHC-RKHDLDSALQVFNQMAKEGCE--PNTVT 287
Query: 267 YHSVAVTLGQVGLLKELVKLIERM-----------RQKPSKRIKNM--HRKNW------- 306
Y ++ L G + E LI M P + +M + W
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+ EP++ Y A+++ S K +F ++ + G+ P+ TY + +++++ +
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
M ++G + +TY +++ + G +A+ + NM QRG Y +
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467
Query: 427 CCLCNNGRWQDAMLVVE----------------------KIKSLRHS------------K 452
C++G A+ +++ KI + +
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P E+T+T LI +D S+ +HMK C PN+ T N ++ ++ + FS A+EL
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+ + P+ TY++M++ ++ M GC +
Sbjct: 588 CKVMIEEG-------------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
++ L+ + GK E+ F L G IP + + +M+ I+ E A +
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 632 AMAYAPFHITERQWTELFES--NEDRISRDKLEKLLNALCNCN 672
M A T + L + NE ++ +L L + + NC+
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 103/520 (19%), Positives = 194/520 (37%), Gaps = 49/520 (9%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
+ L+K K + + MS LD + GL+ F Y+ LL L + G + +
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLR-----MGLFAYSALLIHLSRLGMTAAVMDRY 203
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ ML + + P++ Y++V L + G + + + + +K ++ +
Sbjct: 204 HRMLSE-GVQPNLLIYNAVINALCKDGNVAD---------------AETIMKKVFESEMS 247
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y +++ H VF Q+ K G +P+ TY + + SG+ + +
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL 307
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
R+M G A T + A + G +A +M+ +G Y L LC
Sbjct: 308 IREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+G + A+ + ++ S P +T+ LI ++ I + M ++ C PNI
Sbjct: 368 SGLLKVAIGLFHRM-SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426
Query: 491 TVNAMLKVYS-----------RNDMFSKAKELFEETTRANSSGYT------------FLS 527
T N M+K Y N+M + T GY L
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
DG KPDE++Y+ ++ + E ++ M G ++ + L+ + K
Sbjct: 487 RDGG-CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 647
+ + +G P+ + ++ Q+N+ A L M +T
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 648 LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 687
+ + S ++ N + + +T S+L RAL
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 140/320 (43%), Gaps = 15/320 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P+ V +N +++ ++ + ++ G +P TYG + + + G DL
Sbjct: 166 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 225
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+KM K + Y ++ A +N+A+ M+ +G+ Y L CLC
Sbjct: 226 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 285
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
N GRW DA ++ + R P +TF+ LI + + G + + ++ M K +P+I
Sbjct: 286 NYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++++ + +D +AK +FE +S D P+ TY+++++
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFE----------LMISKDCF---PNVVTYNTLIKGFCK 391
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A + E +++ M+ G + + L+ +AG C + + F ++ G P +
Sbjct: 392 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 451
Query: 610 FTEMLIQAIVQSNYEKAVAL 629
++ +L EKA+ +
Sbjct: 452 YSILLDGLCKYGKLEKALVV 471
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y+ L+ R EA +F LM+ +DC +P++ Y+++ + ++E ++L
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAKRVEEGMELF 402
Query: 288 ERMRQK--------------------PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
M Q+ + + +K + PD++ Y+ +L+
Sbjct: 403 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 462
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + VF+ L+KS ++P TY + +E M ++GK + + F ++ G + Y
Sbjct: 463 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 522
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
++ F +G EA A R M++ G + + Y L
Sbjct: 523 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 560
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +AG A +IF M+ D + PDI Y + L + G L++ + + E +
Sbjct: 417 YNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYL 475
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EPD+ YN ++ + + + + +F L G+KP+
Sbjct: 476 QKSK---------------MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 520
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + + G + FR+M + G + TY L+RA +G + ++ M
Sbjct: 521 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 580
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAML 440
G VG AS + + ++GR + + L
Sbjct: 581 RSCGFVGDAST-ISMVINMLHDGRLEKSYL 609
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 123/583 (21%), Positives = 224/583 (38%), Gaps = 94/583 (16%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLL------KGLGDKGSWRQAM 210
A L+ LS MTA +M++ M +EG LL L G+ A
Sbjct: 352 AYSALLIHLSRLGMTAA------VMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 405
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE---ALRIFNLML-EDCNLYPDIAA 266
+++ V+ + D F YT + ILG R H+ AL++FN M E C P+
Sbjct: 406 TIMKKVFESEMSPD---TFTYTSM--ILGHC-RKHDLDSALQVFNQMAKEGCE--PNTVT 457
Query: 267 YHSVAVTLGQVGLLKELVKLIERM-----------RQKPSKRIKNM--HRKNW------- 306
Y ++ L G + E LI M P + +M + W
Sbjct: 458 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 517
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+ EP++ Y A+++ S K +F ++ + G+ P+ TY + +++++ +
Sbjct: 518 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 577
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
M ++G +TY +++ + G +A+ + NM QRG Y +
Sbjct: 578 YAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 637
Query: 427 CCLCNNGRWQDAMLVVE----------------------KIKSLRHS------------K 452
C++G A+ +++ KI + +
Sbjct: 638 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 697
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P E+T+T LI +D S+ +HMK C PN+ T N ++ ++ + FS A+EL
Sbjct: 698 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 757
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+ + P+ TY++M++ ++ M GC +
Sbjct: 758 CKVMIEEG-------------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
++ L+ + GK E+ F L G IP + + +M+ I+ E A +
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864
Query: 632 AMAYAPFHITERQWTELFES--NEDRISRDKLEKLLNALCNCN 672
M A T + L + NE ++ +L L + + NC+
Sbjct: 865 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 907
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 182/510 (35%), Gaps = 99/510 (19%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
+ L+K K + + MS LD + GL+ F Y+ LL L + G + +
Sbjct: 319 IHLIKSCHSKEAMARTMSFLDMLSQSGLR-----MGLFAYSALLIHLSRLGMTAAVMDRY 373
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ ML + + P++ Y++V L + G + + + + +K ++ +
Sbjct: 374 HRMLSE-GVQPNLLIYNAVINALCKDGNVAD---------------AETIMKKVFESEMS 417
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y +++ H VF Q+ K G +P+ TY + + SG
Sbjct: 418 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG-------- 469
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
++NEA +R M G++ TA LC+
Sbjct: 470 ---------------------------RVNEAFDLIREMILHGILPTAHTCTGPIIALCD 502
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
G ++DA + +K+ + +P T+T LI G + I +F M +D PN
Sbjct: 503 MGCYEDAWRLFVDMKN-KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 561
Query: 491 TVNAMLKVYSRNDMFSKA---------KELFEETTRANS--SGYTFLSGDGAPLKPDEYT 539
T NA++ + N A LF N GY L G P K
Sbjct: 562 TYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCIL---GDP-KKAMLV 617
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
++ML+ +A+ Y + KG SG T A +++ R G C
Sbjct: 618 MNNMLQRGHSANLVTY-NTIIKGYCDSG----NTTSALRILDLMRDGGCK---------- 662
Query: 600 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRD 659
P +TE++ S E A L N M E +T L + D
Sbjct: 663 -----PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 717
Query: 660 KLEKLLNAL----CNCNAASSEITVSNLSR 685
LL + C N + + + L++
Sbjct: 718 TATSLLEHMKRSGCRPNVQTYNVLIHGLTK 747
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 159/377 (42%), Gaps = 23/377 (6%)
Query: 310 LEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
+EPD+V+YN +++ C Q +G+ + + + G P TY ++ ++G+ +
Sbjct: 379 VEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKG 438
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
E F +M K G A +T LV G+++ AV ++RG+ G A Y L
Sbjct: 439 KELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINA 498
Query: 429 LCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 486
CN ++ AM L E +KS P I + LI G + D + +K
Sbjct: 499 FCNVNNFEKAMELFNEMLKS--GCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIR 556
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+ N ++ + R + F + E+ +E + A LKPD TY++++
Sbjct: 557 PDTVCYNTLIGGFCRTNKFHRVFEMLKEM-------------EEAGLKPDTITYNTLIAY 603
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
++ ++ + V + M +G + ++ G + F + A ++P
Sbjct: 604 ASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPP 663
Query: 607 PLFFTEMLIQAIVQSNYEK-AVALINAMAYAPFHITERQWTELFESNEDRISRDK----L 661
+LI ++ ++N K AV+L+ M + +F+ D +K +
Sbjct: 664 NTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFM 723
Query: 662 EKLLNALCNCNAASSEI 678
++++ CN + + EI
Sbjct: 724 DRMIEHACNPDYITMEI 740
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 133/315 (42%), Gaps = 24/315 (7%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILG 239
MN+ G+ + L+ G+ G A++ + +R +K V YT L+
Sbjct: 445 MNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF----FVEAQRRGMKGDAVTYTALINAFC 500
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
+A+ +FN ML+ PD Y+++ Q G + + ++ +++
Sbjct: 501 NVNNFEKAMELFNEMLKS-GCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG----- 554
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ PD V YN ++ ++++ VF + K++ ++GLKP TY +
Sbjct: 555 ----------IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYA 604
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++G + RKM K+G TY ++ A+ G NEA+ ++M+ V
Sbjct: 605 SKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPN 664
Query: 420 SVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
+V Y L LC N + + A+ ++E +K + P T+ + D ++
Sbjct: 665 TVIYNILINSLCKNNKVKSAVSLMEDMK-IWGVTPNTTTYNAIFKGLRDEKDLEKVFEFM 723
Query: 479 QHMKDH-CEPNIGTV 492
M +H C P+ T+
Sbjct: 724 DRMIEHACNPDYITM 738
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 149/401 (37%), Gaps = 61/401 (15%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ------------ 208
L+ RL T + W M + G + LL GL +G++ +
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335
Query: 209 -----------------------AMSVLDWVYGLKDKRDLKSRF-----VYTKLLAILGK 240
A+ VL+ + G K+ + +Y L+ L K
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GR E L + M PD Y+ + + G +++ +L + M ++
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEG------ 449
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+ P++V N ++ + + F + ++ G+K A TY +
Sbjct: 450 ---------VAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++ E F +M KSG + A+ Y L+ F + G++ +A + +++ G+
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIF 478
Y L C ++ V E +K + + KP IT+ LI + G + +
Sbjct: 561 CYNTLIGGFCRTNKFHR---VFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVM 617
Query: 479 QHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
+ M K P + T A++ Y N ++A E+F++ A
Sbjct: 618 RKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAA 658
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 107/284 (37%), Gaps = 32/284 (11%)
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ F +M K G + + L+ EG N + M + + + L +
Sbjct: 291 DLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHM 350
Query: 430 CNNGRWQDAMLVVEKIKSLRHS-------KPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
C R DA+ V+EK+ + S +P + + LI G + + + + M+
Sbjct: 351 CKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMR 410
Query: 483 DH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEE----------------------TTRA 518
C P+ T N ++ + + K KELF+E T R
Sbjct: 411 SQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRV 470
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
+S+ F+ +K D TY++++ A + +E ++ M SGC D + L
Sbjct: 471 SSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTL 530
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ S+AG+ L + G P + + LI ++N
Sbjct: 531 ISGFSQAGRMADASFVLAELKKLGIRPDTVCYNT-LIGGFCRTN 573
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 186/446 (41%), Gaps = 38/446 (8%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
ALRI + ++ +L PD Y +V L G + + V L+ M
Sbjct: 192 ALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVA-------------- 237
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D V+ + +N VL A + + KG +F ++ G P+ ATY + + +L G+
Sbjct: 238 DGVVAAE--AFNPVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTATYNVLVHGLLVCGRAG 295
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
R+M + G G +TY +V G++ +A ME+ G+ VY +
Sbjct: 296 AAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVI 355
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 485
C +G A+ V E + + +P + ++ +I + G + + +F+ M C
Sbjct: 356 TGFCKSGEIDCALKVWEAMVA-SPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKC 414
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PNI T ++++ Y + S+A ++EE GA P+ +YS ++
Sbjct: 415 APNIITYGSIIQGYFKIGDTSRALSVWEEMI-------------GAGCVPNAVSYSILIN 461
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI- 604
+ + V+K M GC D + ++ +G F +L +G
Sbjct: 462 GLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHAD 521
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKL 661
P + + +L ++ + +A+ L+N M P +T + F + E R R+ L
Sbjct: 522 PDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGE-RKGREFL 580
Query: 662 EKLLNALCN--CNAASSEITVSNLSR 685
E L+ LC+ N A+ E+ + L++
Sbjct: 581 EGLVVRLCDRRRNMAAGEVLMVMLAK 606
>gi|299469655|emb|CBN76509.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 787
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 149/342 (43%), Gaps = 23/342 (6%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
MN G+ L ++ GD+ QA+SVL + + K Y + G+
Sbjct: 345 MNALGVRPNTQTCLAAVRAAGDRDRGEQAVSVLRSMSEAGVAAEAK---CYAVTIKACGR 401
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
R AL + M E + P + Y + G ++ V L+ R+ P+ +
Sbjct: 402 GRRWARALELLREM-EKNGVEPIVMGYDACIAACGDGKQWEQAVALL---REMPTVGVT- 456
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMEVM 359
P +V Y+ + AC S+QWK + +++ +++G+ P A Y M +
Sbjct: 457 -----------PTVVSYSHAIAACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMTAL 505
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ ++++ R+M G I A +Y V ++A + G+ AVA +R M+ V
Sbjct: 506 GRGLQWEMALTLLREMPSVGLPIKAQSYTVAIKACGDAGEGKPAVALLREMQAELSVPPN 565
Query: 420 SVYYELACCLCNNG-RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
+ Y A C G +W+ A+ ++ ++ S+ S P + T+T I + + G ++ +S+
Sbjct: 566 VISYTAAIAACGKGDQWKQALELLREMASMGVS-PNDRTYTAAITACGNSGKWEEALSLL 624
Query: 479 QHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+ M +PNI + A +K + +A ELF E A
Sbjct: 625 REMPTMGADPNIASYTATIKACGNGGQWERAVELFRELPSAG 666
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 153/367 (41%), Gaps = 24/367 (6%)
Query: 153 SEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSV 212
+EA+ V + A+ + +R M ++G+ + GD W QA+++
Sbjct: 387 AEAKCYAVTIKACGRGRRWARALELLREMEKNGVEPIVMGYDACIAACGDGKQWEQAVAL 446
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
L + + + S Y+ +A G++ + AL + M ++ + PD Y++
Sbjct: 447 LREMPTVGVTPTVVS---YSHAIAACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMT 503
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
LG+ GL E+ + +R+ PS + P+ Y + AC + + K
Sbjct: 504 ALGR-GLQWEMALTL--LREMPSVGL---------PIKAQS---YTVAIKACGDAGEGKP 548
Query: 333 VFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+ ++++ + P+ +Y A+ + ++ E R+MA G + TY +
Sbjct: 549 AVALLREMQAELSVPPNVISYTAAIAACGKGDQWKQALELLREMASMGVSPNDRTYTAAI 608
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
A GK EA++ +R M G + Y N G+W+ A+ + ++ S +
Sbjct: 609 TACGNSGKWEEALSLLREMPTMGADPNIASYTATIKACGNGGQWERAVELFRELPSAGIT 668
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSRND--MFSK 507
++ + + + + G +D + + + M EPN+ T NA L S D + K
Sbjct: 669 ADVQ-AYNACVQACGNSGAVDQAVELLREMAPAAGLEPNVFTYNAALMACSCPDGGRWGK 727
Query: 508 AKELFEE 514
A EL EE
Sbjct: 728 ALELLEE 734
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 140/348 (40%), Gaps = 24/348 (6%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D V+ NAVLN +W+ V V +Q+R++GL P A TY A++ + ++
Sbjct: 213 DTVMCNAVLNTFAADGRWQVVLEVMRQMREAGLTPDALTYTNAIKACGKGREWRRSVALL 272
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
++M+ G + ++ Y + A G EAV +R M+ G+ + Y A C
Sbjct: 273 KEMSAHGVELNSIHYVCAMTACKISGMGAEAVGLLREMQAAGIEPNV-ICYNTAIAACGT 331
Query: 433 GRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
G + A+ ++E++ +L +P T + ++ D + +S+ + M +
Sbjct: 332 GGQSEVAVDLLEEMNAL-GVRPNTQTCLAAVRAAGDRDRGEQAVSVLRSMSEAGVAAEAK 390
Query: 492 VNAM-LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
A+ +K R +++A EL E + ++P Y + + A
Sbjct: 391 CYAVTIKACGRGRRWARALELLREMEKNG-------------VEPIVMGYDACIAACGDG 437
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL----EAGEIPH 606
QWE + + M G ++ + + G+ + + A + L EAG P
Sbjct: 438 KQWEQAVALLREMPTVGVTPTVVSYSHAI---AACGQSYQWKPALELLREMPQEAGINPD 494
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNED 654
+ + + +E A+ L+ M I + +T ++ D
Sbjct: 495 AVCYNNCMTALGRGLQWEMALTLLREMPSVGLPIKAQSYTVAIKACGD 542
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 90/473 (19%), Positives = 177/473 (37%), Gaps = 55/473 (11%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKEL----VKL--IE 288
GR L + M E L PD Y + G+ V LLKE+ V+L I
Sbjct: 228 GRWQVVLEVMRQMREA-GLTPDALTYTNAIKACGKGREWRRSVALLKEMSAHGVELNSIH 286
Query: 289 RMRQKPSKRIKNMH-------RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+ + +I M R+ +EP+++ YN + AC Q + + +++
Sbjct: 287 YVCAMTACKISGMGAEAVGLLREMQAAGIEPNVICYNTAIAACGTGGQSEVAVDLLEEMN 346
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
G++P+ T A+ + + R M+++G A A Y V ++A +
Sbjct: 347 ALGVRPNTQTCLAAVRAAGDRDRGEQAVSVLRSMSEAGVAAEAKCYAVTIKACGRGRRWA 406
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLRHSKPLEITFTG 460
A+ +R ME+ GV + Y+ C +G+ W+ A+ ++ ++ ++ P ++++
Sbjct: 407 RALELLREMEKNGVEPIV-MGYDACIAACGDGKQWEQAVALLREMPTV-GVTPTVVSYSH 464
Query: 461 LIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
I + + + + M P+ N + R + A L E
Sbjct: 465 AIAACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMTALGRGLQWEMALTLLREMPSV 524
Query: 519 N----SSGYTFL------SGDGAP-------------LKPDEYTYSSMLEASATAHQWEY 555
+ YT +G+G P + P+ +Y++ + A QW+
Sbjct: 525 GLPIKAQSYTVAIKACGDAGEGKPAVALLREMQAELSVPPNVISYTAAIAACGKGDQWKQ 584
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTE 612
+ + MA G + + + +GK E A L E G P+ +T
Sbjct: 585 ALELLREMASMGVSPNDRTYTAAITACGNSGK---WEEALSLLREMPTMGADPNIASYTA 641
Query: 613 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLL 665
+ +E+AV L + A + + ++ + + D+ +LL
Sbjct: 642 TIKACGNGGQWERAVELFRELPSAGITADVQAYNACVQACGNSGAVDQAVELL 694
>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
Length = 649
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 158/383 (41%), Gaps = 43/383 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y ++ + G + + + L+ M + +P+ V YNA L
Sbjct: 258 PDVVIYSTLINGFSEQGHVDQALDLLNTM------------------LCKPNTVCYNAAL 299
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W+ + + ++ + G P+ AT+ + + + Q+ D E +M K G
Sbjct: 300 KGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 359
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAML 440
+ Y +++ + E G++++A+ + +M + +G +V C RW DA
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKG----FCRAERWHDASE 415
Query: 441 VVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
++ ++ R PL E+TF LI + G ++ +F+ M + C P+I T +++L
Sbjct: 416 LIAQM--FRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNG 473
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+S + A +LF P KPD ++Y+++L+ A +WE
Sbjct: 474 FSEQGLVEVAIQLFRSM----------------PCKPDIFSYNAVLKGLCRAARWEDAGE 517
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
+ M C ++ L+ + G + + G P + ++
Sbjct: 518 LIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFS 577
Query: 619 VQSNYEKAVALINAMAYAPFHIT 641
Q + A+ L++ M+ P I+
Sbjct: 578 EQGRLDDALKLLSTMSCKPDAIS 600
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 43/329 (13%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD Y+ + +L + G + + ++L+ M V +PD + +NAVL
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSM------------------VCKPDALGFNAVL 401
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W + Q+ + T+ + ++ + Q+G + + F +M +
Sbjct: 402 KGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCT 461
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-L 440
+TY L+ F E+G + A+ R+M + + + Y + LC RW+DA L
Sbjct: 462 PDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFS---YNAVLKGLCRAARWEDAGEL 518
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
+ E + + P E+TF LI S G +D I + + M ++ P+I T NA++ +
Sbjct: 519 IAEMVG--KDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF 576
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
S A +L + KPD +Y+S L+ A +W+ E +
Sbjct: 577 SEQGRLDDALKLLSTMS----------------CKPDAISYNSTLKGLCRAERWQDAEEL 620
Query: 560 YKGMALSGCQLDQT--KHAWLLVEASRAG 586
M + C ++ K+A L+ +RAG
Sbjct: 621 VAEMLRNKCTPNEVTFKYANHLLMPNRAG 649
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 127/331 (38%), Gaps = 25/331 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN VL + +W+ + ++ ++ P+ T+ + Q+G D
Sbjct: 186 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 245
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-C 428
+ +M + G + Y L+ F E+G +++A+ + M + +V Y A
Sbjct: 246 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM----LCKPNTVCYNAALKG 301
Query: 429 LCNNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
LC RW+D L+ E ++ + P E TF+ LI S +D + + + M+ + CE
Sbjct: 302 LCIAERWEDIGELMAEMVR--KGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 359
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+ N ++ S A L KPD ++++L+
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSMV----------------CKPDALGFNAVLKG 403
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
A +W + M C L + L+ + G + F+ + P
Sbjct: 404 FCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPD 463
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
+ ++ +L Q E A+ L +M P
Sbjct: 464 IVTYSSLLNGFSEQGLVEVAIQLFRSMPCKP 494
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 117/296 (39%), Gaps = 34/296 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ L ++G A+ +L+ + D + +L +A R H+A + M
Sbjct: 368 IINSLSERGRVDDALRLLNSMVCKPDA------LGFNAVLKGFCRAERWHDASELIAQMF 421
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+DC L ++ + TL Q GL+ ++ E+M P R PD+
Sbjct: 422 RDDCPLIE--MTFNILIDTLCQNGLVNYATQVFEQM---PRYRCT------------PDI 464
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
V Y+++LN +G+ V QL R KP +Y ++ + ++ +++ E
Sbjct: 465 VTYSSLLNG----FSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIA 520
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M +T+ +L+ + ++G ++ A+ + M G Y L G
Sbjct: 521 EMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQG 580
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
R DA+ K+ S KP I++ + D + M ++ C PN
Sbjct: 581 RLDDAL----KLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPN 632
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 100/269 (37%), Gaps = 36/269 (13%)
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 488
LC GR DA V++ +K+ + ++ L+ G + D + + N
Sbjct: 100 LCATGRLADAERVLDALKAAAAAD--AVSHNTLVAGYCRDGRLADAERVLGAARATGAAN 157
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T A++ Y R+ A L P+ PD YTY+++L+
Sbjct: 158 VVTYTALIDGYCRSGRLDDALRLIASM----------------PVAPDTYTYNTVLKGLC 201
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A +WE E + M + C ++ A + + G D + G P +
Sbjct: 202 IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVV 261
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAP-----------FHITERQWTELFESNEDRIS 657
++ ++ Q + ++A+ L+N M P I ER W ++ E + +
Sbjct: 262 IYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAER-WEDIGELMAEMVR 320
Query: 658 RD------KLEKLLNALCNCNAASSEITV 680
+ L+++LC N S + V
Sbjct: 321 KGCSPNEATFSMLISSLCQNNLVDSAVEV 349
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 194/474 (40%), Gaps = 42/474 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L L +G A++ + L +R L V + +L +AGR +A + +
Sbjct: 113 VLSALASRGRPGVALAAIHAARDLHGERVLHHPRVLPTAIRVLARAGRLADASALLDAAP 172
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD +AY ++ L + ++ V + RM + N + P LV
Sbjct: 173 D-----PDASAYTALISALSRASRFRDAVAVFRRM-------VANG--------VCPALV 212
Query: 316 VYNAVLNA----CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
YN VL+ VP WK V + +RK G+ TY + + Y +
Sbjct: 213 TYNVVLHVYSKIAVP---WKEVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKV 269
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M +G +T L+ + + + +EA+ ++ MEQ G + Y L
Sbjct: 270 FDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVK 329
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+G ++A + E+++ ++ +P IT+T L+ G ID I + M ++ C+PN+
Sbjct: 330 DGLLEEATQLKEEME-VKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLC 388
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T NA++K++ F + +F+E S+G+ PD T++++L
Sbjct: 389 TYNALIKLHGVRGKFPEMMIVFDEI---RSAGFV----------PDVVTWNTLLAVFGQN 435
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
V+K M SG ++ + L+ SR G + ++EAG P +
Sbjct: 436 GLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTY 495
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 664
+L +E+A L M E ++ L + + DK++ L
Sbjct: 496 NAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSL 549
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/539 (19%), Positives = 211/539 (39%), Gaps = 78/539 (14%)
Query: 172 AKNWK----FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A WK V M + G+ L+ + +++A V D + + D
Sbjct: 225 AVPWKEVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPD--- 281
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ LL + GKA R EA+ + M E P + Y+S+ + + GLL+E +L
Sbjct: 282 KVTLNSLLDVYGKARRYDEAIGVLKEM-EQGGCPPSVVTYNSLISSYVKDGLLEEATQLK 340
Query: 288 ERMRQKP--------SKRIKNMHRK--------NWDPVL----EPDLVVYNAVLNACVPS 327
E M K + + + R ++ +L +P+L YNA++
Sbjct: 341 EEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVR 400
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + VF ++R +G P T+ + V Q+G V F++M KSG TY
Sbjct: 401 GKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTY 460
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ ++ G ++A+ + M + G+ S Y + L GRW+ A + ++++
Sbjct: 461 VSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMEN 520
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-------------------------- 481
L S+P E++++ L+ + + +D S+ + +
Sbjct: 521 L-DSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLS 579
Query: 482 ----------KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ C +I +NAM+ +Y +N M K +E+ ++ + T
Sbjct: 580 DTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTA------ 633
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
TY+S++ + E E + + S + D+ + ++ R G+
Sbjct: 634 -------TYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEA 686
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
F + +G +P + + + + S +E+A+ L+ M ER + + +
Sbjct: 687 SRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQ 745
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 153/397 (38%), Gaps = 42/397 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M V D + D+ + LLA+ G+ G E +F M
Sbjct: 393 LIKLHGVRGKFPEMMIVFDEIRSAGFVPDV---VTWNTLLAVFGQNGLDTEVSGVFKEM- 448
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL + +++ +RM + + PD+
Sbjct: 449 KKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRM---------------IEAGIHPDIS 493
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNAVL+A +W+ +F ++ +P +Y + + K D + +
Sbjct: 494 TYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDI 553
Query: 376 -AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
A+ E+ L K LV + +++ A + +R +V + NG
Sbjct: 554 YAERIESHNGLV-KTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGM 612
Query: 435 WQDAMLVVEKIKSLRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 490
+ VE+I SL + + T+ L+ G + C +I +K P+
Sbjct: 613 VKK----VEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRY 668
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ N M+ Y R +A LF E SG L PD TY+ +++
Sbjct: 669 SYNTMIYAYGRKGQMKEASRLFSEM---KCSG----------LVPDIVTYNIFVKSYVAN 715
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+E + + M GC+ ++ + +L E G+
Sbjct: 716 SMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGR 752
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V +++I GK G + I +LM E NL A Y+S+ ++G ++ ++
Sbjct: 599 VLNAMISIYGKNGMVKKVEEILSLMKESSINL--STATYNSLMHMYSRLGDCEKCENILT 656
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ ++ PD YN ++ A Q K +F +++ SGL P
Sbjct: 657 EIKSSRAR---------------PDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPD 701
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + ++ + + ++ + R M G TY +++ + G+I + + +
Sbjct: 702 IVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFIS 761
Query: 409 NMEQ 412
N+ +
Sbjct: 762 NLPE 765
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/506 (21%), Positives = 203/506 (40%), Gaps = 65/506 (12%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG-------LKDKRDLK---- 226
+ + Q GL +M +K G S + VLD + G RD+K
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF 177
Query: 227 --SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ F Y LL L K + A ++ + + + PD +Y +V ++ +VGL+KE
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLL-VEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L ER EP + VYNA++N H +KG F + +++ + G
Sbjct: 237 ELAER--------------------FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKG 276
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ P+ +Y + V+ SG+ +L F +M K G T LV+ + G +A+
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 405 AAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
M + G+ Y L C++G A+ V ++ + S + T+ LI
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR-TYGSLIN 395
Query: 464 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
G +D + I+ M C PN+ M++ R+ F +A+ L E ++ N +
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 523 YT-----FLSG--DGAPL----------------KPDEYTYSSMLEASATAHQWEYFEYV 559
F+ G D L P+ TY+ +L+ A A++ E +
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
+ + + G + + + LL + AG + ++ G+ P + +++
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 620 QSNYEKAVALINAMAYAPFHITERQW 645
Q E+A +++ ++ R+W
Sbjct: 576 QGKAERAAQMLDLVSCG-----RRKW 596
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 138/381 (36%), Gaps = 36/381 (9%)
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
Q V ++ +Q++ G S + + V Q G + E F ++ + G Y
Sbjct: 91 QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN 150
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKS 447
++ E +I R+M++ G Y L LC N + A L+VE S
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVE--MS 208
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ P +++T +I S + G + + + + + EP + NA++ + +
Sbjct: 209 NKGCCPDAVSYTTVISSMCEVGLVKE----GRELAERFEPVVSVYNALINGLCKEHDYKG 264
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A EL E S P+ +YS+++ + Q E M G
Sbjct: 265 AFELMREMVEKGIS-------------PNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSL-------LEAGEIPHPLFFTEMLIQAIVQ 620
C H + +S C L FD+L G P+ + + ++
Sbjct: 312 C------HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365
Query: 621 SNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITV 680
N KAV++ + M R + L R S D + N + + +
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425
Query: 681 SNLSRALHALCRSEKERDLSS 701
+N+ + ALCR K ++ S
Sbjct: 426 TNM---VEALCRHSKFKEAES 443
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G+ +A+SV + + ++++ Y L+ K G A+ I+N ML
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT---YGSLINGFAKRGSLDGAVYIWNKML 414
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS--------KRIKNMHRK 304
P++ Y ++ L + KE LIE M ++ PS K + + R
Sbjct: 415 TS-GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 305 NWDPVL----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+W + P++V YN +L+ +++ + + + +++ G++ S++TY
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA------VAAVR 408
+ +G + + KM G++ +T +++ A+ ++GK A V+ R
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGR 593
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+ V+ +V + LC + +D ++++E++ S
Sbjct: 594 RKWRPDVISYTNVIWG----LCRSNCREDGVILLERMIS 628
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 207/511 (40%), Gaps = 85/511 (16%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
R EA R+ L REM+ + N G +T G + LL G WR+A++
Sbjct: 240 RVFLEADRLDTAYLVHREMSDSGF------NMDG--YTLGCFVHLL---CKAGRWREALA 288
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+++ K++ L + +YT++++ L +A EA+ + M + P++ Y +
Sbjct: 289 LIE-----KEEFKLDT-VIYTQMISGLCEASLFEEAMDFLSRM-RSSSCIPNVVTYRILL 341
Query: 272 VTL---GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
Q+G K ++ ++ PS+RI +N++++A S
Sbjct: 342 CGCLRKRQLGRCKRILSMMITEGCYPSRRI------------------FNSLIHAYCRSG 383
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY------DLVHEFFRKMAKSGEAI 382
+ + + K++ G +P Y + + + + K +L + + +M + +
Sbjct: 384 DYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVL 443
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ L R GK +A + +R M +G + S Y ++ LCN + +A L+
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
E++KS H P T+T LI S G + F M +D C PN+ T A++ Y +
Sbjct: 504 EEMKS-NHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562
Query: 502 NDMFSKAKELFE----ETTRANSSGYTFL------SG----------------------- 528
S A ELFE E N YT L SG
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622
Query: 529 -----DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
DG P+ +TY ++++ AH+ + + M++ GC+ + + L+
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ GK + F + E G P+ ++ ++
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLI 713
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 125/286 (43%), Gaps = 4/286 (1%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ KA + A +F +ML + P++ Y ++ + G +++ ++ RM
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSE-GCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Query: 291 RQKPSKRIKNMHRKNWDP-VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
R +M+ K D + +P++ Y A+++ +H+ K + + G +P+
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ + GK D F KM++ G TY L+ +++ +++ A+ +
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + +Y E+ LC G+ +A ++ ++ + P +T+T +I G
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE-KGCHPNVVTYTAMIDGFGKAG 790
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+D C+ + + M C PN T ++ + A +L +E
Sbjct: 791 KVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N ++ C + W +L+ G KPS TY + V L++ + D + R+M+
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
SG + T V + G+ EA+A + E + +Y ++ LC +++
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFEE 317
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
AM + +++S P +T+ L+ + + C I M + C P+ N+++
Sbjct: 318 AMDFLSRMRS-SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376
Query: 497 KVYSRNDMFSKAKELFEE 514
Y R+ +S A +L ++
Sbjct: 377 HAYCRSGDYSYAYKLLKK 394
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 108/257 (42%), Gaps = 51/257 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+YT+++ L K G+ EA R+ + M+E+ +P++ Y ++ G+ G ++ K +E
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMS-MMEEKGCHPNVVTYTAMIDGFGKAG---KVDKCLE 797
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP------SHQ----WKGVFW--- 335
MRQ +K P+ V Y ++N C +HQ K +W
Sbjct: 798 LMRQMGAKGCA------------PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 336 --------------------VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+ ++ ++ P Y + ++ ++G+ +L E ++M
Sbjct: 846 MAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905
Query: 376 AK--SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+ S A Y L+ + K+++A +M +RG + S+++ L L
Sbjct: 906 SSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965
Query: 434 RWQDAMLVVEKIKSLRH 450
RW++A+ + + I + H
Sbjct: 966 RWEEALQLSDCICQMVH 982
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 78/417 (18%), Positives = 150/417 (35%), Gaps = 55/417 (13%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
+ L L AG+ +A I M+ PD + Y V L + L E M+
Sbjct: 449 SNLARCLCGAGKFEKAYSIIREMMSK-GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ PD+ Y ++++ C + W F ++ + G P+
Sbjct: 508 SNH---------------VVPDVFTYTILIDSFCKVGLLQQARKW-FDEMVRDGCAPNVV 551
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + L++ K +E F M G +TY L+ + G+I +A M
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ +Y+++ ++G +D P T+ L+
Sbjct: 612 RGNADIPDVDMYFKI-----DDGNIRD---------------PNIFTYGALVDGLCKAHK 651
Query: 471 IDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ + + M + CEPN +A++ + + +A+ +F T+ + GY
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF---TKMSERGY------ 702
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
P+ YTYSS+++ + + V M + C + + ++ + GK
Sbjct: 703 ----GPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITER 643
+ E G P+ + +T M+ +K + L+ M AP +T R
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 202/504 (40%), Gaps = 77/504 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+WR+A+ V + DL + + +L+ + +AL F LM
Sbjct: 106 LINACGSCGNWREALRVCKKMTDNGVGPDLVTHNI---VLSAYKSGAQYSKALSYFELM- 161
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK------------------- 296
+ N+ PD + V L +V + +++ MR+K S+
Sbjct: 162 KGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRG 221
Query: 297 ---RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K + ++P++V YNA+++A K F VF ++++SG P +Y
Sbjct: 222 QIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYT 281
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +S + E F M ++ ++Y L+ A+ G + +AV +R MEQ
Sbjct: 282 SLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQD 341
Query: 414 GV-VGTASVYYELACC--------------------------LCNN--------GRWQDA 438
G+ S+ LA C CN+ G ++ A
Sbjct: 342 GIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKA 401
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAMLK 497
+ + +++ + +KP +TFT LI ++ + F+ M D P + ++M+
Sbjct: 402 INLYRSMEN-KTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMIC 460
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
YS+ KA+ LF L G G PD TY++M+ A + + WE
Sbjct: 461 AYSKQGQLVKAESLFNS-----------LKGSGCC--PDLVTYTAMINAYSASEMWEKVC 507
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+Y+ M + QLD + L+ ++ + + + + E G + F EML
Sbjct: 508 ALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSAC 567
Query: 618 IVQSNYEKAVALINAMAYAPFHIT 641
+ ++ KA LIN M FH+
Sbjct: 568 SILRDWRKATDLINLME-PSFHLV 590
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 124/271 (45%), Gaps = 15/271 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD+ YNA++NA + QW+ + + + ++ + PS +T+ + G +
Sbjct: 62 KPDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALR 121
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+KM +G +T+ +++ A+ + ++A++ M+ + + + CL
Sbjct: 122 VCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLI 181
Query: 431 NNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
++ A+ + ++ R +P +TFT +I G I+DC ++F M + +PN
Sbjct: 182 KVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPN 241
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I + NA++ Y+ + M +A +F+E R SG+ PD +Y+S++
Sbjct: 242 IVSYNALISAYASHGMDKEAFSVFDEMKR---SGFC----------PDVVSYTSLISTFG 288
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ Q V+ M + C+ + + L+
Sbjct: 289 RSQQPARAREVFDMMKRNKCKPNLVSYNALM 319
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 140/320 (43%), Gaps = 15/320 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P+ V +N +++ ++ + ++ G +P TYG + + + G DL
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+KM K + Y ++ A +N+A+ M+ +G+ Y L CLC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
N GRW DA ++ + R P +TF+ LI + + G + + ++ M K +P+I
Sbjct: 302 NYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++++ + +D +AK +FE +S D P+ TY+++++
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFE----------LMISKDCF---PNVVTYNTLIKGFCK 407
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A + E +++ M+ G + + L+ +AG C + + F ++ G P +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 610 FTEMLIQAIVQSNYEKAVAL 629
++ +L EKA+ +
Sbjct: 468 YSILLDGLCKYGKLEKALVV 487
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y+ L+ R EA +F LM+ +DC +P++ Y+++ + ++E ++L
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 288 ERMRQK--------------------PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
M Q+ + + +K + PD++ Y+ +L+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + VF+ L+KS ++P TY + +E M ++GK + + F ++ G + Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
++ F +G EA A R M++ G + + Y L
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +AG A +IF M+ D + PDI Y + L + G L++ + + E +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EPD+ YN ++ + + + + +F L G+KP+
Sbjct: 492 QKSK---------------MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + + G + FR+M + G + TY L+RA +G + ++ M
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAML 440
G VG AS + + ++GR + + L
Sbjct: 597 RSCGFVGDAST-ISMVINMLHDGRLEKSYL 625
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/435 (19%), Positives = 169/435 (38%), Gaps = 36/435 (8%)
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
+ G W++AM +L+ + +L Y + K R EA+ + ++E
Sbjct: 194 NGGRWKEAMDLLEQMVAQGVPPNL---ITYNSAIGACAKGRRWEEAMDLLEEVIEQ-GFP 249
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P Y+ V + G E + L+ +M + D++ Y++V+
Sbjct: 250 PSTRTYNPVIDACAKGGRWLEAMDLLGQMLTND---------------IPADVISYSSVI 294
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
AC +WK + +Q+R G+ P+ +Y A++ + ++ + R+M G
Sbjct: 295 AACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLV 354
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
++Y A G+ EA+ ++ M +G+ Y G+W+ A+ +
Sbjct: 355 PTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKL 414
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS 500
+ + ++ S P I+F I + G + + + + M PN+ T N+ ++
Sbjct: 415 LRGMSTV-GSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACG 473
Query: 501 RNDMFSKAKELFEE-TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
R+ + +A LF E TR L P+ TY+SM++A A QWE +
Sbjct: 474 RSARWQEAMGLFREMPTRG--------------LSPNVVTYNSMIDACAKGEQWELAVQL 519
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
GM G D + + + + L + G P + + +
Sbjct: 520 LTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAK 579
Query: 620 QSNYEKAVALINAMA 634
+ +A+ L+ MA
Sbjct: 580 SGRWREALGLLKDMA 594
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 188/452 (41%), Gaps = 49/452 (10%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
W +AM +L+ V ++ S Y ++ K GR EA+ + ML + ++ D+
Sbjct: 233 WEEAMDLLEEVI---EQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTN-DIPADVI 288
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+Y SV G+ KE + L+E+MR + + P+++ YN+ ++AC
Sbjct: 289 SYSSVIAACGRGRRWKEAMDLLEQMRTQG---------------VSPNVISYNSAIDACA 333
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+WK + +++ GL P+ +Y A +G++ E ++M G A +
Sbjct: 334 KGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTI 393
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS--VYYELACCLCNNGR-WQDAMLVV 442
+Y + A + G+ +AV +R M VG+ + + A C G+ W+ A+ ++
Sbjct: 394 SYNSALDACAKGGQWEKAVKLLRGMS---TVGSDPDIISFNSAIDACGRGQQWETAVELL 450
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR 501
++ + + P IT+ I + + + +F+ M PN+ T N+M+ ++
Sbjct: 451 REMPTAGLT-PNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAK 509
Query: 502 NDMFSKAKELFE---------ETTRANSSGYTFLSGD----------GAPL---KPDEYT 539
+ + A +L + NS+ G+ G P KPD +
Sbjct: 510 GEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIIS 569
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
Y+S + A A + +W + K MA G + + + + + + +
Sbjct: 570 YNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQ 629
Query: 600 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
G P+ + ++ + Q +++AV L+
Sbjct: 630 THGATPNLITYSAAIDACAKQGRWKEAVDLLT 661
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/430 (20%), Positives = 173/430 (40%), Gaps = 34/430 (7%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
WR A++ LD D S Y +A + A+R+ M + + PD+
Sbjct: 91 WRTALAALDEFKISGGSLDTTS---YNIAIAACSNGRQWATAVRLLREMPTE-GVTPDVV 146
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+S + G KE + L+ +M P++ I PD+V YN+ + AC
Sbjct: 147 TYNSAIAACSKGGRWKEAMDLLTQM-VAPTEGIT------------PDVVTYNSAIAACS 193
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+WK + +Q+ G+ P+ TY A+ + +++ + ++ + G
Sbjct: 194 NGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTR 253
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG-RWQDAMLVVEK 444
TY ++ A + G+ EA+ + M + + Y C G RW++AM ++E+
Sbjct: 254 TYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADV-ISYSSVIAACGRGRRWKEAMDLLEQ 312
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRND 503
+++ + P I++ I + G + + + + M P + + N+ + N
Sbjct: 313 MRT-QGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNG 371
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+ +A EL +E + G + P+ +Y+S L+A A QWE + +GM
Sbjct: 372 RWVEALELLKE-----------MPAQG--IAPNTISYNSALDACAKGGQWEKAVKLLRGM 418
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
+ G D + R + + AG P+ + + + + +
Sbjct: 419 STVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARW 478
Query: 624 EKAVALINAM 633
++A+ L M
Sbjct: 479 QEAMGLFREM 488
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 145/339 (42%), Gaps = 37/339 (10%)
Query: 215 WVYGLKDKRDLKSRFV------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
WV L+ +++ ++ + Y L K G+ +A+++ M PDI +++
Sbjct: 373 WVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGM-STVGSDPDIISFN 431
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S + G ++ +E +R+ P+ L P+++ YN+ + AC S
Sbjct: 432 SA---IDACGRGQQWETAVELLREMPTAG------------LTPNVITYNSAIEACGRSA 476
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+W+ +F+++ GL P+ TY ++ + +++L + M G A ++Y
Sbjct: 477 RWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYN 536
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ A + + A+ ++ M RG Y +GRW++A+ +++ + ++
Sbjct: 537 SAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATV 596
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
+ P +++ I + G D + I + M+ H PN+ T +A + ++ + +
Sbjct: 597 GLT-PNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKE 655
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
A +L + R L PD TY +++ A
Sbjct: 656 AVDLLTDLRRQG-------------LTPDAQTYLTVISA 681
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 107/256 (41%), Gaps = 31/256 (12%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR------F 229
+ +R M +GL ++ G W++AM + R++ +R
Sbjct: 448 ELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLF---------REMPTRGLSPNVV 498
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y ++ K + A+++ M + PD+ +Y+S G+ + ++L++
Sbjct: 499 TYNSMIDACAKGEQWELAVQLLTGMPAR-GVAPDVISYNSAIEACGKGEQWELALQLLKG 557
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + K PD++ YN+ + AC S +W+ + K + GL P+
Sbjct: 558 MPTRGPK---------------PDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNT 602
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+YG A+ + ++D+ ++M G +TY + A ++G+ EAV + +
Sbjct: 603 VSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTD 662
Query: 410 MEQRGVVGTASVYYEL 425
+ ++G+ A Y +
Sbjct: 663 LRRQGLTPDAQTYLTV 678
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI +Y+S + G +E + L++ M L P+ V Y A +
Sbjct: 565 PDIISYNSAVTACAKSGRWREALGLLKDMATVG---------------LTPNTVSYGAAI 609
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+AC QW + K+++ G P+ TY A++ + G++ + + + G
Sbjct: 610 HACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLT 669
Query: 382 IGALTYKVLVRAF 394
A TY ++ AF
Sbjct: 670 PDAQTYLTVISAF 682
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 155/370 (41%), Gaps = 32/370 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+ + ++ L G + E ++L++RM + K PDL+ N ++
Sbjct: 254 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK---------------PDLITINTLV 298
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N S + + ++ + G +P+A TYG + VM +SG+ L E RKM +
Sbjct: 299 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 358
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD-AML 440
+ A+ Y +++ + G ++ A ME +G+ Y L CN GRW D A L
Sbjct: 359 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 418
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
+ + IK R P +TF+ LI S + G + + + + M P+ T +++ +
Sbjct: 419 LRDMIK--RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
+ + KA ++ + P+ T++ ++ A++ + +
Sbjct: 477 CKENHLDKANQMVDLMVSKGCD-------------PNIRTFNILINGYCKANRIDDGLEL 523
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
++ M+L G D + L+ GK ++ + F ++ P+ + + +L
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 583
Query: 620 QSNYEKAVAL 629
EKA+ +
Sbjct: 584 NGESEKALEI 593
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 158/378 (41%), Gaps = 36/378 (9%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
TA + +R M + + + ++ GL GS A ++ + ++ K +
Sbjct: 342 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFN---EMEMKGITTNIIT 398
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ AGR + ++ M++ + P++ + + + + G L+E +L + M
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEM 457
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+HR + PD + Y ++++ + + + G P+
Sbjct: 458 ----------IHRG-----IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 502
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + + ++ + D E FRKM+ G +TY L++ F E GK+N A + M
Sbjct: 503 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 562
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGG 469
R V Y L LC+NG + A+ + EKI+ + L+I +II M +
Sbjct: 563 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE--KSKMELDIGIYNIIIHGMCNAS 620
Query: 470 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+DD +F + +P + T N M+ + S+A+ LF + +
Sbjct: 621 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK-----------MEE 669
Query: 529 DGAPLKPDEYTYSSMLEA 546
DG PD +TY+ ++ A
Sbjct: 670 DGHA--PDGWTYNILIRA 685
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 105/259 (40%), Gaps = 15/259 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EP+ + ++ ++N + + ++ + G KP T + + SGK
Sbjct: 253 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 312
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
KM + G A+TY ++ + G+ A+ +R ME+R + A Y + LC
Sbjct: 313 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 372
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
+G +A + +++ ++ IT+ LI + G DD + + M K PN+
Sbjct: 373 KHGSLDNAFNLFNEME-MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 431
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T + ++ + + +A+EL +E + PD TY+S+++
Sbjct: 432 VTFSVLIDSFVKEGKLREAEELHKEMIHRG-------------IAPDTITYTSLIDGFCK 478
Query: 550 AHQWEYFEYVYKGMALSGC 568
+ + + M GC
Sbjct: 479 ENHLDKANQMVDLMVSKGC 497
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ + G+ + A +F M+ + P+I Y + L G ++ +++ E+
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEK 596
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + +E D+ +YN +++ + + + +F L G+KP
Sbjct: 597 IEKSK---------------MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 641
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + + G FRKM + G A TY +L+RA +G ++V +
Sbjct: 642 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 701
Query: 410 MEQRGVVGTASV 421
+++ G AS
Sbjct: 702 LKRCGFSVDAST 713
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/290 (18%), Positives = 111/290 (38%), Gaps = 16/290 (5%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F ++ K G +P+ T+ + + G+ E +M + G +T LV
Sbjct: 241 FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 300
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
GK EA+ + M + G A Y + +C +G+ AM ++ K++ R+ K
Sbjct: 301 LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE-RNIKL 359
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ ++ +I G +D+ ++F M+ NI T N ++ + + +L
Sbjct: 360 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 419
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
+ + + P+ T+S ++++ + E ++K M G D
Sbjct: 420 RDMIKRK-------------INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 466
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ L+ + D ++ G P+ F +LI ++N
Sbjct: 467 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN-ILINGYCKAN 515
>gi|115443739|ref|NP_001045649.1| Os02g0110400 [Oryza sativa Japonica Group]
gi|41052925|dbj|BAD07836.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535180|dbj|BAF07563.1| Os02g0110400 [Oryza sativa Japonica Group]
gi|215706484|dbj|BAG93340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622028|gb|EEE56160.1| hypothetical protein OsJ_05062 [Oryza sativa Japonica Group]
Length = 747
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 124/581 (21%), Positives = 234/581 (40%), Gaps = 77/581 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+A GKA P E++++F LM D + +Y++V L ++ R R+
Sbjct: 178 LIAAYGKANIPQESVKLFRLM-PDLGIARTALSYNAV------------LKAILCRGREA 224
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
++RI N + + PDL YN ++ + + VF ++ G+ P TY
Sbjct: 225 MARRIYNAMIAD---AVTPDLSTYNTLIWGFGLCKKMEAALRVFGDMKDHGVTPDVTTYN 281
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +++G + + F +M +G A +++Y V+++ + E GK+ EAV M ++
Sbjct: 282 TLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSEMGEK 341
Query: 414 GVVGTASVYYELACCLCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
G+ + + L LC++ GR +A ++ + R + + F L+ + G +D
Sbjct: 342 GLRLSEKTFAALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRAGDLD 401
Query: 473 DCISI------FQH-----------MKDHCEPNI--GTVNAMLKVYSRNDMFSKAKELFE 513
+ + F+H M+ C G V M ++ + + S + E
Sbjct: 402 GALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTLLSPKSPVLE 461
Query: 514 ETTRANSSGYTFLSGDGAPLKP-------------DEYTYSSMLEASATAHQWEYFEYVY 560
A + +L +G K D+ ++S++ A E + +
Sbjct: 462 GP--AYNPVIEYLCSNGNTSKAETFFRQLMKKGVDDKAAFNSLIRGHAKEGVPEAAQEIL 519
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M G + D HA L+ + + + A DS++E G +P P F +++
Sbjct: 520 AIMTRRGVRTDPESHALLVDSFLKKNEPADAKTALDSMMEQGHVPSPSLFMSVMVALFNS 579
Query: 621 SNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLL------NALCNCNAA 674
+ A ++ +M E+ TE N D ++ LE L A+ N
Sbjct: 580 GRVQTASRVMKSM-------IEKGVTE----NMD-MAHKILEALFMRGHVEEAIGRVNLM 627
Query: 675 SSEITVSNLSRALHALCRSEKERDLSSSAHFGSQA---IDISPLHGIHEAFDVKETENVP 731
+ +L + L ALC ++K + A F + S + EA +E + +P
Sbjct: 628 VENGCLPDLDKLLIALCENDKVMEAHKLADFALDRDFDVSFSTYDRVLEALYTEE-KTLP 686
Query: 732 SSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLSRQAD 772
+ S +N D QK A+ +DS+ S+QAD
Sbjct: 687 AYSMLCKIKNKGGVVD---QKGCDAL-MDSLKAGGYSKQAD 723
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 163/369 (44%), Gaps = 40/369 (10%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L++LG+A +P A +F+ + ++ + Y+S+ + G + +L+ RM+ +
Sbjct: 97 MLSVLGRANQPGLAQELFDR--AESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDR 154
Query: 294 PSKR--------IKNMHRKN-------------WDPVLEPDLVVYNAVLNACVPSHQWKG 332
+ IK R + L PD + YN +++AC +++
Sbjct: 155 GCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSD 214
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+F+++++ G P TY + V ++G+ + FR M + G A+TY ++
Sbjct: 215 AILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLH 274
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN-GRWQDAMLVVEKIKSLRHS 451
AF +G+I E V +R M + + + Y + G + A + ++K
Sbjct: 275 AFARDGRIEE-VERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKE-EGR 332
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
P +TFT LI + G +++ ++F+ M K P + +AM+ Y++ DMF+ A+
Sbjct: 333 CPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEH 392
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
+ RA ++PD YS ML+ A E +YK M SG +
Sbjct: 393 TYSCMLRAG-------------VRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKP 439
Query: 571 DQTKHAWLL 579
+ + +A ++
Sbjct: 440 ELSVYAIMV 448
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 155/365 (42%), Gaps = 55/365 (15%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y+A+L+A + ++ + +GL+P+A +E ++GK + EFF+++
Sbjct: 684 YSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLP 743
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ G + + T+ V+ AF G + EA + R M++ G + V+ L
Sbjct: 744 EMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEI 803
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHMKD-HCEPNIGTVNA 494
DA +V+ IK + L+I +IS G + +F+ M++ C P+ T N
Sbjct: 804 DAEELVKDIK--KAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNT 861
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ +YSRN M +A+ L E + ++ P+ TY++++ A +E
Sbjct: 862 LIMLYSRNQMVQEAQALLREMIKTGNA-------------PNISTYTTLISAYGRLQAYE 908
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK----------------------CHLL- 591
E V+K +A +GC+ D T + ++ +AG+ H+L
Sbjct: 909 DAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLM 968
Query: 592 ------------EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA--- 636
E ++L E G P + +T ++ + +Y AV + M A
Sbjct: 969 DSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVR 1028
Query: 637 PFHIT 641
P H+T
Sbjct: 1029 PTHVT 1033
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 100/498 (20%), Positives = 188/498 (37%), Gaps = 85/498 (17%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++D R Y ++ + GKAG +A ++ M E+ PD + + TLG+ G
Sbjct: 292 MRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRC-PDSVTFTVLIDTLGKAG 350
Query: 279 LLKELVKLIERMRQ---KPSKRI-----------------KNMHRKNWDPVLEPDLVVYN 318
+ E + E M + +P+ + ++ + + PDL+ Y+
Sbjct: 351 FVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYS 410
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK- 377
+L+ + + ++K + SGLKP + Y + + V Q + ++M +
Sbjct: 411 VMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQS 470
Query: 378 -----------------------------SGEAIGALTYKVLVRAFWEEGKINEA---VA 405
G A+ T ++ AF GK+++A V
Sbjct: 471 SASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVH 530
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT-FTGLIIS 464
AV ++E A +Y LA L GR+ +A E++++ + ++++ F ++++
Sbjct: 531 AVSSIEPS---VAAHLYKRLAVMLAKAGRFSEAE---EEMRTSQTYGQVQVSDFLKVLVA 584
Query: 465 SMD-GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA---- 518
S D G D+ ++ F M + E + + + Y R A EL + A
Sbjct: 585 SYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFDVK 644
Query: 519 NSSGYTFLSGDGAPLK------------------PDEYTYSSMLEASATAHQWEYFEYVY 560
+S+ + + LK + YS++L A A +E
Sbjct: 645 DSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRAL 704
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M +G Q + T ++L RAGK + F L E G P+ F +
Sbjct: 705 DNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRN 764
Query: 621 SNYEKAVALINAMAYAPF 638
N E+A ++ M A F
Sbjct: 765 GNLEEARSMYRQMKEAGF 782
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
+P IT+ LI + + D I IF+ M + C+P+I T NAM+ VY R A
Sbjct: 193 RPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASS 252
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
+F G+T PD TY+S+L A A + E E + M + C
Sbjct: 253 IFRIM---QEQGFT----------PDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSS 299
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
D+ + ++ +AG E + + E G P + FT ++
Sbjct: 300 DEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLI 343
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 99/233 (42%), Gaps = 17/233 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y ++++ K G A +F M ++ PD ++++ + + +++E L+
Sbjct: 823 IYNHMISLYSKLGSYRNAALVFKGM-QEIGCSPDATTFNTLIMLYSRNQMVQEAQALLRE 881
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M IK + P++ Y +++A ++ VFK + ++G KP A
Sbjct: 882 M-------IKTGN--------APNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDA 926
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y + + V ++G++ + E +M G T +L+ ++ + G +A +
Sbjct: 927 TAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLET 986
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
+ + G+ A Y + NN + A++ + K+ +P +T T +
Sbjct: 987 LPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTD-ACVRPTHVTITCFV 1038
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 88/238 (36%), Gaps = 50/238 (21%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
LE D+ +YN +++ ++ VFK +++ G P A T+ + + ++
Sbjct: 817 LELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQ 876
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
R+M K+G A TY L+ A+ G++
Sbjct: 877 ALLREMIKTGNAPNISTYTTLISAY---GRLQA--------------------------- 906
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
++DA LV + I KP + +I G I + MK D EP+
Sbjct: 907 -----YEDAELVFKSIAE-TGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPS 960
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ T++ ++ Y + KA+E+ E S PD Y+S++ +
Sbjct: 961 LTTIHMLMDSYGKGGATGKAEEVLETLPEIGMS-------------PDAIHYTSIINS 1005
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 194/467 (41%), Gaps = 48/467 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLK L G W A++++ WV D + + + LA G+ H+A + +L+
Sbjct: 120 LLKALELSGHWEWALALVRWVRAEGGAADAAALEMVVRTLAREGQ----HDA--VCDLLD 173
Query: 256 EDCNLYP-----DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
E L P D+ AY +V L G + ++L ++++ +
Sbjct: 174 EMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREG---------------V 218
Query: 311 EPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P V+YN +L+ W + + +++R +G++P T + + G D
Sbjct: 219 APTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAV 278
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
FF + G +TY L++ F + G EA+ ++ ME+ G A Y ELA
Sbjct: 279 AFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSY 338
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
G +++A ++ + S + P T+ ++ + + G +D+ +++F M K+ P
Sbjct: 339 ARAGFYEEAAKCLDTMVS-KGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPY 397
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T N +L + + F+ E+ E +R+ + P+ T+++ML
Sbjct: 398 VNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCT-------------PNRVTWNTMLAVCG 444
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIP 605
Y V + M G +L + L+ S G+C +AF D + AG P
Sbjct: 445 KRGMEGYVTRVLERMKSCGVELCRDTFNTLI---SAYGRCGSRANAFKMYDEMTAAGFTP 501
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESN 652
+ +L Q ++ A ++IN M F + ++ L + +
Sbjct: 502 CLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCH 548
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/500 (20%), Positives = 192/500 (38%), Gaps = 53/500 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L L +G + +A L+ LK + + +Y +L + G+ GR + +
Sbjct: 193 VLHALSHEGRYERA---LELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEM 249
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD +V G+ GL+ E V E ++ + P +V
Sbjct: 250 RAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHV---------------PCVV 294
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNA+L + + V K++ +SG KP A TY ++G Y+ + M
Sbjct: 295 TYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTM 354
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G A TY ++ A+ GK++EA+A M++ G + + Y + L R+
Sbjct: 355 VSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRF 414
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
+ ML + S P +T+ ++ G + + MK E T N
Sbjct: 415 -NVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNT 473
Query: 495 MLKVYSRNDMFSKAKELFEETTRAN--------SSGYTFLSGDG--------------AP 532
++ Y R + A ++++E T A ++ + LS G
Sbjct: 474 LISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEG 533
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEY----VYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
KP++ +YS +L+ A E VY+G + +T L++ + +
Sbjct: 534 FKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRT----LVISNFKCRRL 589
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQW 645
+E AF ++ G P + F ML Y KA + +++ +P IT
Sbjct: 590 EGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSM 649
Query: 646 TELFESNEDRISRDKLEKLL 665
+++ + + +K+ K L
Sbjct: 650 MDMYAKSNESWEAEKILKRL 669
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/396 (18%), Positives = 152/396 (38%), Gaps = 34/396 (8%)
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM--- 375
++L A S W+ + + +R G AA + + + + G++D V + +M
Sbjct: 119 SLLKALELSGHWEWALALVRWVRAEGGAADAAALEMVVRTLAREGQHDAVCDLLDEMLPL 178
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR- 434
+ Y ++ A EG+ A+ +++ GV T +Y + GR
Sbjct: 179 PPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRS 238
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVN 493
W + ++E++++ +P T + +I + G +D+ ++ F+ +K P + T N
Sbjct: 239 WPQIVAMLEEMRA-AGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYN 297
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A+L+V+ + + +A + +E + KPD TY+ + + A A +
Sbjct: 298 ALLQVFGKAGNYMEALRVLKEMEESGC-------------KPDAVTYNELAGSYARAGFY 344
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
E M G + + ++ AGK FD + + G IP+ + +
Sbjct: 345 EEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLI 404
Query: 614 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNA 673
L +S + + ++ M+ + W + R + ++L + +C
Sbjct: 405 LGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGV 464
Query: 674 ASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQA 709
LCR +S+ GS+A
Sbjct: 465 ---------------ELCRDTFNTLISAYGRCGSRA 485
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/423 (16%), Positives = 159/423 (37%), Gaps = 90/423 (21%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G+ G +A+++ DW +K + Y +L +LGK R FN+ML
Sbjct: 369 IMTAYGNAGKVDEALALFDW---MKKNGFIPYVNTYNLILGMLGKKSR-------FNVML 418
Query: 256 E--------DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR---- 303
E C P+ ++++ G+ G+ + +++ERM+ + ++
Sbjct: 419 EMLGEMSRSGCT--PNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLIS 476
Query: 304 ------------KNWDPV----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
K +D + P L YNA+L+ W + +++ G KP
Sbjct: 477 AYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKP 536
Query: 348 SAATYGLAMEVMLQSG-----------------------------------KYDLVHEFF 372
+ +Y L ++ + G + + + F
Sbjct: 537 NDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAF 596
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+++ G + + ++ + + G +A +++Q G+ Y + +
Sbjct: 597 QEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKS 656
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
+A +++++K+ KP +++ ++ G I + I M D P + T
Sbjct: 657 NESWEAEKILKRLKT-SQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVT 715
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+ ++ Y+ +MFS+A+E+ + N L P E TY ++++ A
Sbjct: 716 YHTLVGGYASREMFSEAREVVSYMIQRN-------------LSPMELTYRRVVDSYCKAK 762
Query: 552 QWE 554
+++
Sbjct: 763 RFD 765
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PDLV++N++L+ + ++ +F +++ GL P TY M++ +S + +
Sbjct: 605 KPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEK 664
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+++ S ++Y ++ F ++G I EA + M GV Y+ L
Sbjct: 665 ILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYA 724
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
+ + +A VV + R+ P+E+T+ ++ S D+
Sbjct: 725 SREMFSEAREVVSYMIQ-RNLSPMELTYRRVVDSYCKAKRFDE 766
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 15/177 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ ++S+ + G+ ++ ++ + ++Q L PDL+ YN+++
Sbjct: 606 PDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGG---------------LSPDLITYNSMM 650
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S++ + K+L+ S LKP +Y M + G +M G
Sbjct: 651 DMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVR 710
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+TY LV + +EA V M QR + Y + C R+ +A
Sbjct: 711 PCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRFDEA 767
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 169/416 (40%), Gaps = 49/416 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+EP++VVY+++L S +W+ V VF ++ + G++P Y ++ + + GK H
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
M + G +TY VL+ +EG + EA+ ++ M ++GV Y L L
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 430 CNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
+ +AM L+ E ++ KP +TF +I D G + + M++ C
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ T N ++ R KA EL +E T L+PD +TYS +++
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG-------------LEPDSFTYSILIKGF 407
Query: 548 ATAHQWEYFE---------------YVYKGMALSGCQ-------------------LDQT 573
Q + E + Y + ++ C+ LD
Sbjct: 408 CKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVV 467
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ ++ A +AG + S+++ G P + ++ ++ + E A ++ M
Sbjct: 468 AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527
Query: 634 AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 689
+ F + L + + +K+ +L+ + N A +S LS +L A
Sbjct: 528 TASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVA 583
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 151/392 (38%), Gaps = 36/392 (9%)
Query: 235 LAILGKAGRPHEA------LRIFNL-----MLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
LA+L + GR A LR+ L +L+ D +Y++V L + G
Sbjct: 37 LAVLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRA 96
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
L+ M +P P P+ V Y ++ A + + +R +
Sbjct: 97 GALLRAMSLEPH------------PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSA 144
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G++ TYG + + + + D E +M +SG + Y L++ + + G+ +
Sbjct: 145 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 204
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
M ++G+ +Y L LC G+ + A V++ + R +P +T+ LI
Sbjct: 205 GKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR-RGLEPNVVTYNVLIN 263
Query: 464 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
G + + I + + M + P++ T N ++K S +A L EE R +
Sbjct: 264 CMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNI- 322
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+KP+ T++S+++ + V M +GC ++ + L+
Sbjct: 323 ----------VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
R K D + G P ++ ++
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILI 404
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 177/429 (41%), Gaps = 40/429 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ L G ++A V+D + +R L+ V Y L+ + K G EA+ + M
Sbjct: 226 LIDSLCKVGKAKKAHGVMDMMV----RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM 281
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E + PD+ Y+++ L V + E + L+E M R KN +++P++
Sbjct: 282 SEK-GVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM-----VRGKN--------IVKPNV 327
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V +N+V+ + + F V + ++G + TY L + +L+ K E +
Sbjct: 328 VTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE 387
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G + TY +L++ F + +++ A + M RG+ Y L +C G
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGM 447
Query: 435 WQDAMLVVEKIKSLRHSKPLEIT-FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
+ A + ++ PL++ ++ +I + G + + + + D P+ T
Sbjct: 448 MERAR---NLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTY 504
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ ++ +++++ A + ++ T +SG+ PD + S+++ +T +
Sbjct: 505 SIVINMFAKSGDMEAANGVLKQMT---ASGFL----------PDVAVFDSLIQGYSTKGE 551
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVE--ASRAGKCHLLEHA-FDSLLEAGEIPHPLF 609
+ + M LD + L AS GK L F + + G I P
Sbjct: 552 INKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAEISKGNINSPQE 611
Query: 610 FTEMLIQAI 618
++L AI
Sbjct: 612 LMKVLHNAI 620
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 202/504 (40%), Gaps = 77/504 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+WR+A+ V + DL + + +L+ + +AL F LM
Sbjct: 11 LINACGSCGNWREALRVCKKMTDNGVGPDLVTHNI---VLSAYKSGAQYSKALSYFELM- 66
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK------------------- 296
+ N+ PD + V L +V + +++ MR+K S+
Sbjct: 67 KGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRG 126
Query: 297 ---RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K + ++P++V YNA+++A K F VF ++++SG P +Y
Sbjct: 127 QIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYT 186
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +S + E F M ++ ++Y L+ A+ G + +AV +R MEQ
Sbjct: 187 SLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQD 246
Query: 414 GV-VGTASVYYELACC--------------------------LCNN--------GRWQDA 438
G+ S+ LA C CN+ G ++ A
Sbjct: 247 GIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKA 306
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAMLK 497
+ + +++ + +KP +TFT LI ++ + F+ M D P + ++M+
Sbjct: 307 INLYRSMEN-KTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMIC 365
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
YS+ KA+ LF L G G PD TY++M+ A + + WE
Sbjct: 366 AYSKQGQLVKAESLFNS-----------LKGSGCC--PDLVTYTAMINAYSASEMWEKVC 412
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+Y+ M + QLD + L+ ++ + + + + E G + F EML
Sbjct: 413 ALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSAC 472
Query: 618 IVQSNYEKAVALINAMAYAPFHIT 641
+ ++ KA LIN M FH+
Sbjct: 473 SILRDWRKATDLINLME-PSFHLV 495
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/410 (18%), Positives = 159/410 (38%), Gaps = 32/410 (7%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P + ++++ G G +E +++ ++M D + PDLV +N VL
Sbjct: 3 PSRSTFNNLINACGSCGNWREALRVCKKMT---------------DNGVGPDLVTHNIVL 47
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM--AKSG 379
+A Q+ F+ ++ + ++P T + + +++ +Y E F M +S
Sbjct: 48 SAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSE 107
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+T+ ++ + G+I + A M G+ Y L ++G ++A
Sbjct: 108 CRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAF 167
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKV 498
V +++K P +++T LI + +F MK + C+PN+ + NA++
Sbjct: 168 SVFDEMKRSGFC-PDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDA 226
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
Y N +A ++ E + DG + P+ + ++L A Q +
Sbjct: 227 YGSNGYLPQAVDILRE-----------MEQDG--IHPNVVSICTLLAACGRFGQKVNIDS 273
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
V L G L+ + G+ + + S+ P + FT ++
Sbjct: 274 VLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCC 333
Query: 619 VQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
S YE+A+ M ++ ++ + + + K E L N+L
Sbjct: 334 RMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSL 383
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 103/271 (38%), Gaps = 48/271 (17%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P +N ++NAC W+ V K++ +G+ P T+ + + +Y
Sbjct: 1 IPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKAL 60
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+F M + T +++ + + +A+ +M ++
Sbjct: 61 SYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKR--------------- 105
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
+P +TFT +I G I+DC ++F M + +PN
Sbjct: 106 -------------------SECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPN 146
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I + NA++ Y+ + M +A +F+E R SG+ PD +Y+S++
Sbjct: 147 IVSYNALISAYASHGMDKEAFSVFDEMKR---SGFC----------PDVVSYTSLISTFG 193
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ Q V+ M + C+ + + L+
Sbjct: 194 RSQQPARAREVFDMMKRNKCKPNLVSYNALM 224
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 186/472 (39%), Gaps = 66/472 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y ++ K G EA + M+ED ++ PD+ Y++V L + ++E + L
Sbjct: 79 SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSSRVEEALLL 137
Query: 287 ---IERMRQKPSKRIKN------MHRKNWDPVLE-----------PDLVVYNAVLNACVP 326
+ER+ P++R N + D + PD Y +++
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAK 197
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + + +F+++ SG+ PSA TY + + M + D E F+ M G T
Sbjct: 198 AGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFT 257
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
+ +L+ A + GK++EA ++ M G V Y L LC+ R DA ++E +
Sbjct: 258 FNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMF 505
R KP +T LI G I + + M + P++ T N ++ + R
Sbjct: 318 K-RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376
Query: 506 SKAKELFEETT----RANSSGYTFL-------------SGDGAPLK-----PDEYTYSSM 543
+A+EL + N YT L G A +K P+ +TY+++
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 436
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC--------------- 588
+ +A Q + ++ M +G D + L E ++G+
Sbjct: 437 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 496
Query: 589 ------HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ A D LLEAG++ L F +++ E+ +L+ +
Sbjct: 497 SEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLC 548
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 148/343 (43%), Gaps = 33/343 (9%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLM 187
+D Q+ + AK++ P W + +L+D L++ + +K + M SG+
Sbjct: 166 IDQACQVFHEMEAKDI---PPDSW-----SYGILIDGLAKAGKLNEAYKLFQRMLDSGIT 217
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
+ ++ G+ + +A L+ ++ K SRF + L+ K G+ EA
Sbjct: 218 PSAVTYNVVIHGMCLAYTLDEA---LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEA 274
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--RQ-KPSKRIKN--MH 302
R+ M +D ++ PD+ Y ++ L + + + L+E M RQ KP+ +N +H
Sbjct: 275 FRLLKRMTDDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIH 333
Query: 303 -----------RKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
R+ D ++ PD+V YN +++ + Q + + + GL P
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 393
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + + ++ + F +M SG A TY L+ F G+++ +
Sbjct: 394 NVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLF 453
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV-EKIKSLR 449
M G+ VY LA LC +GR A+ ++ E +SLR
Sbjct: 454 GEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 496
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/403 (19%), Positives = 168/403 (41%), Gaps = 35/403 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD Y +++ + + +F++L SG+ PS Y + + + +D
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E F M + G +TY V++ A + G + EA ++ M + G V Y + L
Sbjct: 66 ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
C + R ++A+L+ +++ L P + +I+ ID +F M+ P+
Sbjct: 126 CKSSRVEEALLLFNEMERL-GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPD 184
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ ++ ++ ++A +LF+ R SG T P TY+ ++
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFQ---RMLDSGIT----------PSAVTYNVVIHGMC 231
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIP 605
A+ + ++K M GC+ + L+ + GK L+ AF + + G +P
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK---LDEAFRLLKRMTDDGHVP 288
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMA---YAPFHITERQWTE-LFESNEDRISRDKL 661
+ ++ ++ + + A L+ M P +T+ L ++ + +R+
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE-- 346
Query: 662 EKLLNALCNCNAASSEITVSNLSRALHALCR---SEKERDLSS 701
+L+A+ + + +T + L +H CR +E+ R+L S
Sbjct: 347 --VLDAMVSSGQSPDVVTYNTL---VHGHCRAGQTERARELLS 384
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/371 (17%), Positives = 145/371 (39%), Gaps = 31/371 (8%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
+N+ +K + P V Y ++++ ++ + +F + + G PS TY + ++
Sbjct: 30 RNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDA 89
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ G + + +KM + G +TY ++ + ++ EA+ ME+ G
Sbjct: 90 SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPN 149
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
+ + LC + A V ++++ + P ++ LI G +++ +F
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEA-KDIPPDSWSYGILIDGLAKAGKLNEAYKLF 208
Query: 479 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTF---------- 525
Q M D P+ T N ++ +A ELF+ + S +TF
Sbjct: 209 QRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKR 268
Query: 526 ------------LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
++ DG PD TYS+++ + + + ++ + M C+
Sbjct: 269 GKLDEAFRLLKRMTDDGH--VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
L+ +AG+ D+++ +G+ P + + ++ E+A L++ M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Query: 634 ---AYAPFHIT 641
AP +T
Sbjct: 387 VARGLAPNVVT 397
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 21/258 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G ++A VLD + D+ Y L+ +AG+ A + + M+
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDV---VTYNTLVHGHCRAGQTERARELLSDMV 387
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L P++ Y ++ L + L E + +M+ P+L
Sbjct: 388 AR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA---------------PNLF 431
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y A++ + Q G +F ++ +G+ P YG + +SG+ E R+
Sbjct: 432 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREG 491
Query: 376 AKS--GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+S EA G Y+ V E GK+ A+ VR+M + G + L LC +G
Sbjct: 492 RESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551
Query: 434 RWQDAMLVVEKIKSLRHS 451
+ +A V+E+I L +
Sbjct: 552 QGGEARAVLEEIMDLAYG 569
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 17/275 (6%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R + L++ G+A R E RIF M E+ + D Y+++ T + G + L+
Sbjct: 224 RITFNTLISAAGRANRWEECDRIFAEM-EERGIARDDVTYNTLIATYCRGGQMHLGAALM 282
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + +EP ++ Y+ +++ +F+++R ++P
Sbjct: 283 ETMAKSSG--------------IEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 328
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
Y +++ + G +D H R M ++G A +TY L+ ++ ++GK EA++ +
Sbjct: 329 DGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLL 388
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M+QRG Y L C +G +DAM + + +K +P + ++ L+
Sbjct: 389 EEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKK-AGLQPDVVLYSTLVDGCCK 447
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR 501
G D+ +++ + M D+ PN+ T N++L Y R
Sbjct: 448 NGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 482
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 165/355 (46%), Gaps = 38/355 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF--VYTKLLAILGKAGRPHEALRIFNL 253
+++ LG G W + + DW + +++L+S++ V + +++ LG+ GR A IF+
Sbjct: 89 IVRELGHSGQWEKVVKSFDW---MVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDR 145
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ ++ Y S+ G+ G L + V++ E M+ V +P+
Sbjct: 146 AV-GAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV----------------VCKPN 188
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
LVVYNAV++AC + +F+++ + G+ P T+ + ++ +++ F
Sbjct: 189 LVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFA 248
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM-EQRGVVGTASVYYELACCLCNN 432
+M + G A +TY L+ + G+++ A + M + G+ + Y +
Sbjct: 249 EMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKL 308
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 491
G +A+ + +++++ ++ +P I + ++ G+ D+ SI + M++ +I T
Sbjct: 309 GLAHEAIALFQEMRN-QNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVT 367
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
NA+L Y + F +A L EE + +S P+ TYS++++A
Sbjct: 368 YNALLDSYGKQGKFREAMSLLEEMKQRGAS-------------PNILTYSALIDA 409
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 179 RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAIL 238
R M ++G LL G +G +R+AMS+L+ +K + + Y+ L+
Sbjct: 354 RAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLE---EMKQRGASPNILTYSALIDAY 410
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
K G +A+ +F ++ L PD+ Y ++ + G E + L+E M
Sbjct: 411 CKHGFHRDAMALFQ-DVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMA------- 462
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
D + P+++ YN++L+A Q V F +LR L +M+
Sbjct: 463 --------DNGIRPNVITYNSLLDAY--GRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQD 512
Query: 359 MLQS-----GKYDLV---HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA---VAAV 407
QS K LV FR+MAK+G +T+ ++ A + +A + A+
Sbjct: 513 DQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAM 572
Query: 408 RNMEQR--GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
R + R GV + + + W+DA + ++ +L H+
Sbjct: 573 RVFDGRVYGVTHGLLMGFRIRV-------WRDAETLFNELTTLGHN 611
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/478 (20%), Positives = 189/478 (39%), Gaps = 45/478 (9%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+S F Y ++ L K G A +F M ++ PDI Y+S+ G++GLL E +
Sbjct: 54 RSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECIC 112
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ E+M+ D +PD++ YNA++N + F +++ +GL
Sbjct: 113 IFEQMK---------------DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 157
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
KP+ TY ++ + G +FF M + TY L+ A + G + EA+
Sbjct: 158 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 217
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
V + Q G+ Y L LC GR ++A V + + P + T+T L+
Sbjct: 218 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN-AGVAPNQETYTALVHGF 276
Query: 466 MDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ ++ I + MK+ C +P++ +L +AK L E +
Sbjct: 277 IKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG----- 331
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
+ + Y+++++A Y G A L + LV+
Sbjct: 332 --------INTNAVIYTTLMDA-----------YFKSGQATEALTL--LEEMLDLVDGLC 370
Query: 585 AGKC-HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
C + + FD +L+ G +P + +T ++ + N ++A+ L + M +
Sbjct: 371 KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLH 430
Query: 644 QWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSS 701
+T L K LL+ + E+ L + +AL + ++ +L +
Sbjct: 431 AYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQN 488
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 119/302 (39%), Gaps = 59/302 (19%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
F ++RK + P + + + + G+ DL +FF+ M +G TY +++
Sbjct: 8 CFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLC 67
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+EG + A + M++ G P
Sbjct: 68 KEGDLEMARSLFTQMKEAGFT------------------------------------PDI 91
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+ LI G +D+CI IF+ MKD C+P++ T NA++ + + + KA E E
Sbjct: 92 VTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHE 151
Query: 515 T----TRANSSGYT------------------FLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ N Y+ F+ L P+E+TY+S+++A+ A
Sbjct: 152 MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 211
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+ + + +G +L+ + LL G+ E F ++L AG P+ +T
Sbjct: 212 LAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTA 271
Query: 613 ML 614
++
Sbjct: 272 LV 273
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 147/348 (42%), Gaps = 30/348 (8%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
FK + +G+K S TY + ++ + + G ++ F +M ++G +TY L+ +
Sbjct: 44 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 103
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G ++E + M+ Y L C C R A + ++K+ KP +
Sbjct: 104 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKA-NGLKPNVV 162
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T++ I + G + + I F M+ PN T +++ + ++A +L EE
Sbjct: 163 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 222
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+A +K + TY+++L+ + + E V++ M +G +Q +
Sbjct: 223 LQAG-------------IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETY 269
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGE---IPHPLFFTEMLIQAIVQSNYEKAVALINA 632
L+ +A + +E+A D L E E P L + +L +S E+A LI
Sbjct: 270 TALVHGFIKAKE---MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGE 326
Query: 633 MAYAPFHITERQWTEL----FESNEDRISRDKLEKLL---NALC--NC 671
+ + + +T L F+S + + LE++L + LC NC
Sbjct: 327 IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNC 374
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 123/590 (20%), Positives = 238/590 (40%), Gaps = 95/590 (16%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
R EA R+ L REM+ + N G +T G + LL G WR+A++
Sbjct: 240 RVFLEADRLDTAYLVHREMSDSGF------NMDG--YTLGCFVHLL---CKAGRWREALA 288
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+++ K++ L + +YT++++ L +A EA+ + M + P++ Y +
Sbjct: 289 LIE-----KEEFKLDT-VIYTQMISGLCEASLFEEAMDFLSRM-RSSSCIPNVVTYRILL 341
Query: 272 VTL---GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
Q+G K ++ ++ PS+RI +N++++A S
Sbjct: 342 CGCLRKRQLGRCKRILSMMITEGCYPSRRI------------------FNSLIHAYCRSG 383
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY------DLVHEFFRKMAKSGEAI 382
+ + + K++ G +P Y + + + + K +L + + +M + +
Sbjct: 384 DYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVL 443
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ L R GK +A + +R M +G + S Y ++ LCN + +A L+
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
E++KS H P T+T LI S G + F M +D C PN+ T A++ Y +
Sbjct: 504 EEMKS-NHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562
Query: 502 NDMFSKAKELFE----ETTRANSSGYTFL------SG----------------------- 528
S A ELFE E N YT L SG
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622
Query: 529 -----DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
DG P+ +TY ++++ AH+ + + M++ GC+ + + L+
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHI 640
+ GK + F + E G P+ ++ ++ + + A+ +++ M + AP I
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742
Query: 641 TERQWTELFESNEDRISRDKLEKLLNAL----CNCNAASSEITVSNLSRA 686
+TE+ + D+ +L++ + C+ N + + +A
Sbjct: 743 I---YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKA 789
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 125/286 (43%), Gaps = 4/286 (1%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ KA + A +F +ML + P++ Y ++ + G +++ ++ RM
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSE-GCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Query: 291 RQKPSKRIKNMHRKNWDP-VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
R +M+ K D + +P++ Y A+++ +H+ K + + G +P+
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ + GK D F KM++ G TY L+ +++ +++ A+ +
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + +Y E+ LC G+ +A ++ ++ + P +T+T +I G
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE-KGCHPNVVTYTAMIDGFGKAG 790
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+D C+ + + M C PN T ++ + A +L +E
Sbjct: 791 KVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N ++ C + W +L+ G KPS TY + V L++ + D + R+M+
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
SG + T V + G+ EA+A + E + +Y ++ LC +++
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFEE 317
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
AM + +++S P +T+ L+ + + C I M + C P+ N+++
Sbjct: 318 AMDFLSRMRS-SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376
Query: 497 KVYSRNDMFSKAKELFEE 514
Y R+ +S A +L ++
Sbjct: 377 HAYCRSGDYSYAYKLLKK 394
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 103/246 (41%), Gaps = 51/246 (20%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+YT+++ L K G+ EA R+ + M+E+ +P++ Y ++ G+ G ++ K +E
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMS-MMEEKGCHPNVVTYTAMIDGFGKAG---KVDKCLE 797
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP------SHQ----WKGVFW--- 335
MRQ +K P+ V Y ++N C +HQ K +W
Sbjct: 798 LMRQMGAKGCA------------PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 336 --------------------VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+ ++ ++ P Y + ++ ++G+ +L E ++M
Sbjct: 846 MAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905
Query: 376 A--KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+ S A Y L+ + K+++A +M +RG + S+++ L L
Sbjct: 906 SSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965
Query: 434 RWQDAM 439
RW++A+
Sbjct: 966 RWEEAL 971
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 174/431 (40%), Gaps = 46/431 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ +++ L K G+ EAL + M E + PD+A Y + L + G + E +L +M
Sbjct: 13 YSTIISGLCKTGKVTEALEMVEEMTEK-GVNPDVATYTIIVDRLCRAGKVDEADELFHKM 71
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ + V YNA++N + + + +++ G +P
Sbjct: 72 IERGC---------------SANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNI 116
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + + GK +FF M G + + Y L+ A ++EGK+ EA + M
Sbjct: 117 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM 176
Query: 411 E--QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+ R V Y L C + +AM + + + + + P +T+ +++
Sbjct: 177 DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIA-KGYMPDTVTYNSILLGLARK 235
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL- 526
++D+ +F+ M D C PN T + +L + R ++ EL+EE T S L
Sbjct: 236 SNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLC 295
Query: 527 -----------------------SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
S GA PD TY+ +L+ + + ++ M
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIGAV--PDVVTYNILLDGLCKTNLVDKAHELFSTM 353
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
+GC D ++ +L + K H FD ++E +P + F ++
Sbjct: 354 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 413
Query: 624 EKAVALINAMA 634
++A L++ M+
Sbjct: 414 DEAKDLLDVMS 424
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 166/395 (42%), Gaps = 26/395 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
EPD+V Y+ +++ + + + +++ + G+ P ATY + ++ + ++GK D
Sbjct: 6 FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E F KM + G + + Y L+ ++ I A + M +G Y + L
Sbjct: 66 ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM---KDHCE 486
C G+ +A + + S R P + + GL+ + G + + +F+ M
Sbjct: 126 CRMGKVSEAKQFFDSMPS-RGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ T N ++ + R + +A +LF++ + GY PD TY+S+L
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVI---AKGYM----------PDTVTYNSILLG 231
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
A + E ++K M SGC + ++ +L R G ++ + E P
Sbjct: 232 LARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPD 291
Query: 607 PLF---FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK 663
L +ML +A + K + ++ + P +T + L + DK +
Sbjct: 292 VLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVT---YNILLDGLCKTNLVDKAHE 348
Query: 664 LLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
L + + + N + +I + S L+ LC++ K D
Sbjct: 349 LFSTMVD-NGCAPDIV--SYSVVLNGLCKTNKVHD 380
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 177/449 (39%), Gaps = 44/449 (9%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQML--KLLKGLGDKG 204
P + + + A L+D L + A+ W + M+ + + L+ G
Sbjct: 142 PSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVE 201
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
+AM + V K + Y +L L + EA +F M+ D P+
Sbjct: 202 KTDEAMKLFKDVIA---KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV-DSGCAPNG 257
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
A Y V +VG + ++L E M +K PD+++ NAV++
Sbjct: 258 ATYSIVLSGHCRVGNMARCLELYEEMTEKR---------------FSPDVLLCNAVIDML 302
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + V +++ K G P TY + ++ + ++ D HE F M +G A
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
++Y V++ + K+++A M +R +V + L LC G+ +A +++
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD- 421
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV------NAMLKV 498
+ S + P +T T L+ D+ + +FQ+M + GTV N +L
Sbjct: 422 VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK-----GTVADVLPHNIVLAG 476
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
R ++A F+ +++ PD TY++++ A A + +
Sbjct: 477 LCREGKLAQALLFFKSMVKSDGE-----------FSPDVVTYTTLVNALIEAGRVDQAVD 525
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGK 587
++ M SGC D + L+ + G+
Sbjct: 526 YFQQMTGSGCAPDYVAYNTLMNGLRKQGR 554
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 207/511 (40%), Gaps = 85/511 (16%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
R EA R+ L REM+ + N G +T G + LL G WR+A++
Sbjct: 240 RVFLEADRLDTAYLVHREMSDSGF------NMDG--YTLGCFVHLL---CKAGRWREALA 288
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+++ K++ L + +YT++++ L +A EA+ + M + P++ Y +
Sbjct: 289 LIE-----KEEFKLDT-VIYTQMISGLCEASLFEEAMDFLSRM-RSSSCIPNVVTYRILL 341
Query: 272 VTL---GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
Q+G K ++ ++ PS+RI +N++++A S
Sbjct: 342 CGCLRKRQLGRCKRILSMMITEGCYPSRRI------------------FNSLIHAYCRSG 383
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY------DLVHEFFRKMAKSGEAI 382
+ + + K++ G +P Y + + + + K +L + + +M + +
Sbjct: 384 DYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVL 443
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ L R GK +A + +R M +G + S Y ++ LCN + +A L+
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
E++KS H P T+T LI S G + F M +D C PN+ T A++ Y +
Sbjct: 504 EEMKS-NHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562
Query: 502 NDMFSKAKELFE----ETTRANSSGYTFL------SG----------------------- 528
S A ELFE E N YT L SG
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622
Query: 529 -----DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
DG P+ +TY ++++ AH+ + + M++ GC+ + + L+
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ GK + F + E G P+ ++ ++
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLI 713
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 125/286 (43%), Gaps = 4/286 (1%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ KA + A +F +ML + P++ Y ++ + G +++ ++ RM
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSE-GCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Query: 291 RQKPSKRIKNMHRKNWDP-VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
R +M+ K D + +P++ Y A+++ +H+ K + + G +P+
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ + GK D F KM++ G TY L+ +++ +++ A+ +
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + +Y E+ LC G+ +A ++ ++ + P +T+T +I G
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE-KGCHPNVVTYTAMIDGFGKAG 790
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+D C+ + + M C PN T ++ + A +L +E
Sbjct: 791 KVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N ++ C + W +L+ G KPS TY + V L++ + D + R+M+
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
SG + T V + G+ EA+A + E + +Y ++ LC +++
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFEE 317
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
AM + +++S P +T+ L+ + + C I M + C P+ N+++
Sbjct: 318 AMDFLSRMRS-SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376
Query: 497 KVYSRNDMFSKAKELFEE 514
Y R+ +S A +L ++
Sbjct: 377 HAYCRSGDYSYAYKLLKK 394
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 152/417 (36%), Gaps = 55/417 (13%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
+ L L AG+ +A I M+ PD + Y V L + L E M
Sbjct: 449 SNLARCLCGAGKFEKAYSIIREMMSK-GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM- 506
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K+ H + PD+ Y ++++ C + W F ++ + G P+
Sbjct: 507 -------KSNH-------VVPDVFTYTILIDSFCKVGLLQQARKW-FDEMVRDGCAPNVV 551
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + L++ K +E F M G +TY L+ + G+I +A M
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ +Y+++ ++G +D P T+ L+
Sbjct: 612 RGNADIPDVDMYFKI-----DDGNIRD---------------PNIFTYGALVDGLCKAHK 651
Query: 471 IDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ + + M + CEPN +A++ + + +A+ +F T+ + GY
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF---TKMSERGY------ 702
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
P+ YTYSS+++ + + V M + C + + ++ + GK
Sbjct: 703 ----GPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITER 643
+ E G P+ + +T M+ +K + L+ M AP +T R
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 26/228 (11%)
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDW--VYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+FT G L+ GL ++A +LD V G + + VY L+ K G+
Sbjct: 636 IFTYGA---LVDGLCKAHKVKEARDLLDVMSVEGCE-----PNHIVYDALIDGFCKVGKL 687
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
EA +F M E P++ Y S+ L + L +K++ RM +
Sbjct: 688 DEAQMVFTKMSER-GYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCA-------- 738
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
P++++Y +++ + + + + + G P+ TY ++ ++GK
Sbjct: 739 -------PNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
D E R+M G A +TY+VL+ G +++A + M+Q
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 91/219 (41%), Gaps = 18/219 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y L+ L KA + EA + ++M +E C P+ Y ++ +VG L E +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCE--PNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+M ++ P++ Y+++++ + V ++ ++ P
Sbjct: 695 TKMSERGYG---------------PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAP 739
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ Y ++ + + GK D + M + G +TY ++ F + GK+++ + +
Sbjct: 740 NVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELM 799
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
R M +G Y L C G DA +++++K
Sbjct: 800 RQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 17/275 (6%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R + L++ G+A R E RIF M E+ + D Y+++ T + G + L+
Sbjct: 225 RITFNTLISAAGRANRWEECDRIFAEM-EERGIARDDVTYNTLIATYCRGGQMHLGAALM 283
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + +EP ++ Y+ +++ +F+++R ++P
Sbjct: 284 ETMAKSSG--------------IEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 329
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
Y +++ + G +D H R M ++G A +TY L+ ++ ++GK EA++ +
Sbjct: 330 DGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLL 389
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M+QRG Y L C +G +DAM + + +K +P + ++ L+
Sbjct: 390 EEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKK-AGLQPDVVLYSTLVDGCCK 448
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR 501
G D+ +++ + M D+ PN+ T N++L Y R
Sbjct: 449 NGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 483
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 165/355 (46%), Gaps = 38/355 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF--VYTKLLAILGKAGRPHEALRIFNL 253
+++ LG G W + + DW + +++L+S++ V + +++ LG+ GR A IF+
Sbjct: 90 IVRELGHSGQWEKVVKSFDW---MVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDR 146
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ ++ Y S+ G+ G L + V++ E M+ V +P+
Sbjct: 147 AV-GAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV----------------VCKPN 189
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
LVVYNAV++AC + +F+++ + G+ P T+ + ++ +++ F
Sbjct: 190 LVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFA 249
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM-EQRGVVGTASVYYELACCLCNN 432
+M + G A +TY L+ + G+++ A + M + G+ + Y +
Sbjct: 250 EMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKL 309
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 491
G +A+ + +++++ ++ +P I + ++ G+ D+ SI + M++ +I T
Sbjct: 310 GLAHEAIALFQEMRN-QNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVT 368
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
NA+L Y + F +A L EE + +S P+ TYS++++A
Sbjct: 369 YNALLDSYGKQGKFREAMSLLEEMKQRGAS-------------PNILTYSALIDA 410
>gi|302775192|ref|XP_002971013.1| hypothetical protein SELMODRAFT_63047 [Selaginella moellendorffii]
gi|300160995|gb|EFJ27611.1| hypothetical protein SELMODRAFT_63047 [Selaginella moellendorffii]
Length = 413
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/397 (19%), Positives = 178/397 (44%), Gaps = 47/397 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A+++ + +K R + + YT ++ L A R+F+ ++
Sbjct: 33 LITGLMKDGDEADAIAIFE---RMKHDRVAPTLYTYTAVMRALSHVQGWESAHRMFSELV 89
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR-----KNWDPVL 310
+L PD+A Y+++ G+ L+ +++ ERM+++ ++N+ +
Sbjct: 90 VHGSLKPDVAMYNTMLAAYGRGHKLERVLQTWERMQKEGC--VENVGTYCLLVSTFVQTN 147
Query: 311 EPDLV-----------------VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ DL +Y ++ C +W FK++ +SG KP+ TY
Sbjct: 148 QADLALDAYARMNSQGLKATDGIYRGLVCVCATQGRWLVALTFFKEMLESGCKPTIVTYN 207
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ M + ++GK+++V + +M SG A T ++ + + A+ +++
Sbjct: 208 VLMRALGKAGKWEIVLDLLPRMKASGVAPDFYTVNAVLNGLIAAREFDRAMLFFHSVKSS 267
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G+ VY + + W+ A+ +V++++ + P E+TF L+++ + ++
Sbjct: 268 GMKLDREVYNVILVACQKSKNWEAALSLVQEMEQTGIA-PNEVTFGPLLVACENAKQVEV 326
Query: 474 CISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ +++HMK C PN V ++++ + M+ +A+ ++ ++
Sbjct: 327 ALRLYEHMKQRRCVPNTHVVASLIRACGKELMWQQARNIYRVSS---------------- 370
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
P+ Y Y+++++A + ++ + V + M GCQ
Sbjct: 371 --PNVYVYNALIDAYCRSQKYHLAKKVDRRMIEEGCQ 405
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 145/371 (39%), Gaps = 32/371 (8%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L +AGR A ++ L D AY+S+ L + G + + + ERM+
Sbjct: 2 LSRAGRRRTAFKVLE-WLSDRKRGIHANAYNSLITGLMKDGDEADAIAIFERMKHDR--- 57
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG-LKPSAATYGLAM 356
+ P L Y AV+ A W+ +F +L G LKP A Y +
Sbjct: 58 ------------VAPTLYTYTAVMRALSHVQGWESAHRMFSELVVHGSLKPDVAMYNTML 105
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ K + V + + +M K G TY +LV F + + + A+ A M +G+
Sbjct: 106 AAYGRGHKLERVLQTWERMQKEGCVENVGTYCLLVSTFVQTNQADLALDAYARMNSQGLK 165
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
T +Y L C GRW A+ +++ KP +T+ L+ + G + +
Sbjct: 166 ATDGIYRGLVCVCATQGRWLVALTFFKEMLE-SGCKPTIVTYNVLMRALGKAGKWEIVLD 224
Query: 477 IFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ MK P+ TVNA+L F +A F SSG +K
Sbjct: 225 LLPRMKASGVAPDFYTVNAVLNGLIAAREFDRAMLFFHSV---KSSG----------MKL 271
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
D Y+ +L A + WE + + M +G ++ LLV A + + +
Sbjct: 272 DREVYNVILVACQKSKNWEAALSLVQEMEQTGIAPNEVTFGPLLVACENAKQVEVALRLY 331
Query: 596 DSLLEAGEIPH 606
+ + + +P+
Sbjct: 332 EHMKQRRCVPN 342
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 173/399 (43%), Gaps = 46/399 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK------SRFVYTKLLAILGKAGRPHEALR 249
L++ L +G ++A+SVL RD++ + Y L+A +AG A R
Sbjct: 163 LVRALCGRGHRKEALSVL---------RDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAER 213
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+ ++M E L P++ ++SV + + G +++ K+ + M ++
Sbjct: 214 LVDMMREG-GLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG--------------- 257
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD V YN ++ VF ++ + G+ P T+ + VM ++G +
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAV 317
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
R+M + G + +T+ L+ F ++G +++A+ AVR M Q + + Y L
Sbjct: 318 GLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGY 377
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C GR +A +V ++++ + KP +T++ ++ + G + Q M ++ P+
Sbjct: 378 CMVGRMDEARELVREMEA-KGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPD 436
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T +++++V A LF+ L+PDE TY+S+++
Sbjct: 437 AITYSSLIRVLCEEKRLGDAHVLFKNMISLG-------------LQPDEVTYTSLIDGHC 483
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
E ++ M +G D ++ L+ S++ +
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSAR 522
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 141/369 (38%), Gaps = 35/369 (9%)
Query: 312 PDLVVYNAVL----NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P ++ YNAVL +A +PS + F + G+ P+ TY + + + G
Sbjct: 121 PSVLAYNAVLLALSDASLPSARR-----FFDSMLSDGVAPNVYTYNILVRALCGRGHRKE 175
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
R M +G A+TY LV AF G+++ A V M + G+ + +
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
+C GR +DA V +++ P +++ L+ G + +S+F M +
Sbjct: 236 GICKAGRMEDARKVFDEMVK-EGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIM 294
Query: 487 PNIGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTFLSGDG------------ 530
P++ T +++ V + +A +E+ E + N +T L DG
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALI-DGFCKKGFLDDALL 353
Query: 531 -------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
++P Y++++ + + + + M G + D ++ +L
Sbjct: 354 AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
+ G H +LE G +P + ++ ++ + A L M E
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473
Query: 644 QWTELFESN 652
+T L + +
Sbjct: 474 TYTSLIDGH 482
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 22/274 (8%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + G+M L+ + G+ +A+ + V ++++ + +T L+ K
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGL---VREMRERGLQMNEITFTALIDGFCK 344
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G +AL M C + P + Y+++ VG + E +L+ M K K
Sbjct: 345 KGFLDDALLAVREM-RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVK---- 399
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
PD+V Y+ +L+A + F + +Q+ ++G+ P A TY + V+
Sbjct: 400 -----------PDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLC 448
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ + H F+ M G +TY L+ +EG + A++ M + GV+
Sbjct: 449 EEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVV 508
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
Y L L + R ++A ++ K L H +P+
Sbjct: 509 TYSVLINGLSKSARTKEAQRLLFK---LYHEEPV 539
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 173/399 (43%), Gaps = 34/399 (8%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
L+ ++ TKL+ L G+PHEA +FN + E+ + P + Y ++ L
Sbjct: 13 LRGNNSCQTVHARTKLMNTLIGKGKPHEAQAVFNNLTEEGH-KPTLITYTTLVAAL---- 67
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
RQK K I + K D ++PD ++ NA++NA S + +F+
Sbjct: 68 -----------TRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQ 116
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA-IGALTYKVLVRAFWEE 397
++++ G KP+ +TY ++ +G+ + M + TY +L++A+ +
Sbjct: 117 KMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTK 176
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
K+ EA + M G+ Y +A NG + A ++ K+ KP E T
Sbjct: 177 KKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKM-PYNIVKPNERT 235
Query: 458 FTGLIISS-MDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
G+IIS G++ + + MK+ +PN N+++K Y +T
Sbjct: 236 -CGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYL-------------DT 281
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
T N + +KPD T+S+++ A ++A E E ++ M +G + D +
Sbjct: 282 TDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAY 341
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ L RAG+ E S+ + G P+ + FT ++
Sbjct: 342 SILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTII 380
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 125/324 (38%), Gaps = 63/324 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ + G +AM + + YG K Y L+ G AGRP+E++++ +
Sbjct: 98 MINAFSESGKVDEAMKIFQKMKEYGCKPTTS-----TYNTLIKGFGIAGRPYESMKLLEM 152
Query: 254 MLEDCN-----------------------------------LYPDIAAYHSVAVTLGQVG 278
M +D N + PD+ Y+++A Q G
Sbjct: 153 MGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNG 212
Query: 279 LLKELVKLIERMRQ---KPSKR-----IKNMHRKNWDP------------VLEPDLVVYN 318
+ +LI +M KP++R I ++ P ++P+ VV+N
Sbjct: 213 ETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFN 272
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+++ + + GV + + G+KP T+ M +G + E F M K+
Sbjct: 273 SLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKA 332
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G Y +L + + G+ +A A + +M + GV ++ + C G+ A
Sbjct: 333 GIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRA 392
Query: 439 MLVVEKIKSLRHSKPLEITFTGLI 462
+ EK+ + S L+ T+ LI
Sbjct: 393 FRLCEKMHEMGTSPNLK-TYETLI 415
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
++E+ + PD+ + ++ GL++ ++ M + +EPD
Sbjct: 293 LMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAG---------------IEPD 337
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ Y+ + V + Q + + + K G++P+ + + +GK D
Sbjct: 338 IHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCE 397
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
KM + G + TY+ L+ + E + +A + ME+RGVV
Sbjct: 398 KMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVV 440
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 160/385 (41%), Gaps = 28/385 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ R EA+ + N M+E + PD+ Y ++ +L + G + + L ++M
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVE-MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+N+ + PD+V+Y +++N S +W+ + + + K +KP
Sbjct: 204 -------------ENYG--IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ ++ ++ GK+ E + +M + A TY L+ F EG ++EA M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
E +G Y L C + DAM + ++ S + IT+T LI G
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM-SQKGLTGNTITYTTLIQGFGQVGK 367
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ +F HM PNI T N +L N KA +FE+ + G
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG------- 420
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+ P+ +TY+ +L + E V++ M + + ++ +AGK
Sbjct: 421 ---VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEML 614
+ F SL G P+ + +T M+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 128/310 (41%), Gaps = 16/310 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P ++ + +LN ++ V + L+ G+ T L M QS + L F
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K G +T+ L+ F ++ EA++ V M + G+ +Y + LC
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
NG A+ + +++++ +P + +T L+ + G D S+ + M K +P++
Sbjct: 190 NGHVNYALSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T NA++ + + F A+EL+ E R + + P+ +TY+S++
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMS-------------IAPNIFTYTSLINGFCME 295
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ ++ M GC D + L+ + K F + + G + + +
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 611 TEMLIQAIVQ 620
T LIQ Q
Sbjct: 356 TT-LIQGFGQ 364
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/325 (18%), Positives = 123/325 (37%), Gaps = 50/325 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
EPD+V + +++N ++ + + Q+ + G+KP Y
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMY----------------- 180
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
++ + + G +N A++ ME G+ +Y L L
Sbjct: 181 ------------------TTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
CN+GRW+DA ++ + R KP ITF LI + + G D ++ M + PN
Sbjct: 223 CNSGRWRDADSLLRGMTK-RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I T +++ + +A+++F + G PD Y+S++
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMF-----------YLMETKGC--FPDVVAYTSLINGFC 328
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + ++ M+ G + + L+ + GK ++ + F ++ G P+
Sbjct: 329 KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM 633
+ +L +KA+ + M
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDM 413
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
Y + K + YT L+ G+ G+P+ A +F+ M+ + P+I Y+ + L
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR-GVPPNIRTYNVLLHCLCY 399
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G +K+ + + E +M ++ D V P++ YN +L+ + + + V
Sbjct: 400 NGKVKKALMIFE-----------DMQKREMDGV-APNIWTYNVLLHGLCYNGKLEKALMV 447
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F+ +RK + TY + ++ M ++GK F + G +TY ++ +
Sbjct: 448 FEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Query: 397 EGKINEAVAAVRNMEQRGV 415
EG +EA R M++ GV
Sbjct: 508 EGLKHEAHVLFRKMKEDGV 526
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 170/417 (40%), Gaps = 65/417 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L R +A+ + M +DC + PD+ Y ++ L + V+L+ M
Sbjct: 97 YTTLMRALCADRRAAQAVGLLRSM-QDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM 155
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ +EP++VVY+ +L+ + +W+ V VF+++ G++P
Sbjct: 156 ---------------CESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVV 200
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y ++ + + GK M + G +TY VL+ + +EG + EA+ +NM
Sbjct: 201 MYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNM 260
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
++GV Y L L + +AM L+ E ++ +P +TF +I G
Sbjct: 261 SEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIG 320
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ + + M ++ C N+ N ++ R KA EL +E SSG
Sbjct: 321 WMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMA---SSG------ 371
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFE-----------------YV--YKGMALSG-- 567
L+PD +TYS ++ Q E E Y+ K M G
Sbjct: 372 ----LQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMM 427
Query: 568 -------------CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
C+LD ++ ++ A ++G+ + E +++ G IP + ++
Sbjct: 428 GQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYS 484
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/417 (18%), Positives = 162/417 (38%), Gaps = 28/417 (6%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D +Y++V L + G L + L+ M +P R+ + P+ + Y ++
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEP--RLAS----------RPNAISYTTLMR 102
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
A + + + ++ G++P TYG + + + D E +M +SG
Sbjct: 103 ALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEP 162
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ Y L+ + + G+ M RG+ +Y L LC +G+ + A V+
Sbjct: 163 NVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVM 222
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR 501
+ + R +P +T+ LI S G + + + + ++M + +P++ T N ++ S
Sbjct: 223 DMMTE-RGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSS 281
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+A L EE + + ++PD T++S++ V
Sbjct: 282 VLEMDEAMALLEEMMQGETR-----------VRPDLMTFNSVIHGLCKIGWMRQALQVRA 330
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
MA +GC+ + L+ R K D + +G P ++ ++
Sbjct: 331 MMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMR 390
Query: 622 NYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL---CNCNAAS 675
E+A + ++ M + + L ++ D+ + L N + C +AA+
Sbjct: 391 QVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAA 447
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/394 (19%), Positives = 144/394 (36%), Gaps = 75/394 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G W V + + G + D+ +YT L+ L + G+ +A R+ ++M
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDV---VMYTALIDSLCRHGKVKKAARVMDMMT 226
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPVLE- 311
E L P++ Y+ + ++ + G ++E + L + M +K P N VLE
Sbjct: 227 ER-GLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEM 285
Query: 312 ------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
PDL+ +N+V++ + V + ++G + + +
Sbjct: 286 DEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFN 345
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
L + +L+ K E +MA SG + TY +L+ F + ++ A + + M +
Sbjct: 346 LLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQ 405
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G+ +P + + L+ + D G +
Sbjct: 406 GM------------------------------------EPEPVHYIPLLKAMCDQGMMGQ 429
Query: 474 CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+F M +C+ + + M+ ++ A+E ++ L
Sbjct: 430 ARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEG-------------L 476
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
PD TYS + A + E V K M SG
Sbjct: 477 IPDAVTYSIPINMFAKSGDLAAAERVLKQMTASG 510
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/320 (18%), Positives = 114/320 (35%), Gaps = 58/320 (18%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L K + + +M + GL L+ + +GS R+A LD +
Sbjct: 205 LIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREA---LDLRKNMS 261
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGL 279
+K Y L+ L EA+ + M++ + + PD+ ++SV L ++G
Sbjct: 262 EKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGW 321
Query: 280 LKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
+++ +++ M R K+ + + L+PD Y+
Sbjct: 322 MRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSI 381
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKP-------------------------------- 347
++N Q + ++R G++P
Sbjct: 382 LINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNC 441
Query: 348 --SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
AA Y + +SG+ + EF + M G A+TY + + F + G + A
Sbjct: 442 KLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAER 501
Query: 406 AVRNMEQRGVVGTASVYYEL 425
++ M G V +V+ L
Sbjct: 502 VLKQMTASGFVPDVAVFDSL 521
>gi|218189906|gb|EEC72333.1| hypothetical protein OsI_05540 [Oryza sativa Indica Group]
Length = 747
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 124/581 (21%), Positives = 234/581 (40%), Gaps = 77/581 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+A GKA P E++++F LM D + +Y++V L ++ R R+
Sbjct: 178 LIAAYGKANIPQESVKLFRLM-PDLGIARTALSYNAV------------LKAILCRGREA 224
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
++RI N + + PDL YN ++ + + VF ++ G+ P TY
Sbjct: 225 MARRIYNAMIAD---AVTPDLSTYNTLIWGFGLCKKMEAALRVFGDMKDHGVTPDVTTYN 281
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +++G + + F +M +G A +++Y V+++ + E GK+ EAV M ++
Sbjct: 282 TLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSEMGEK 341
Query: 414 GVVGTASVYYELACCLCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
G+ + + L LC++ GR +A ++ + R + + F L+ + G +D
Sbjct: 342 GLRLSEKTFAALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRAGDLD 401
Query: 473 DCISI------FQH-----------MKDHCEPNI--GTVNAMLKVYSRNDMFSKAKELFE 513
+ + F+H M+ C G V M ++ + + S + E
Sbjct: 402 GALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTLLSPKSPVLE 461
Query: 514 ETTRANSSGYTFLSGDGAPLKP-------------DEYTYSSMLEASATAHQWEYFEYVY 560
A + +L +G K D+ ++S++ A E + +
Sbjct: 462 GP--AYNPVIEYLCSNGNTSKAETFFRQLMKKGVDDKAAFNSLIRGHAKEGVPEAAQEIL 519
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M G + D HA L+ + + + A DS++E G +P P F +++
Sbjct: 520 AIMTRRGVRTDPESHALLVDSFLKKNEPADAKTALDSMMEQGHVPSPSLFMSVMVALFNG 579
Query: 621 SNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLL------NALCNCNAA 674
+ A ++ +M E+ TE N D ++ LE L A+ N
Sbjct: 580 GRVQTASRVMKSM-------IEKGVTE----NMD-MAHKILEALFMRGHVEEAIGRVNLM 627
Query: 675 SSEITVSNLSRALHALCRSEKERDLSSSAHFGSQA---IDISPLHGIHEAFDVKETENVP 731
+ +L + L ALC ++K + A F + S + EA +E + +P
Sbjct: 628 VENGCLPDLDKLLIALCENDKVMEAHKLADFALDRDFDVSFSTYDRVLEALYTEE-KTLP 686
Query: 732 SSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLSRQAD 772
+ S +N D QK A+ +DS+ S+QAD
Sbjct: 687 AYSMLCKIKNKGGVVD---QKGCDAL-MDSLKAGGYSKQAD 723
>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 376
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 127/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KSG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDRAVSVLNGMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
NI T N ++ +N+MF +A L +E L P TYS +++
Sbjct: 198 NIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LNPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFD 294
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 113/281 (40%), Gaps = 19/281 (6%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LV + K+ + + Q G + ++ GL + + +A+SVL+ G+
Sbjct: 99 ILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLN---GM 155
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ VY L+ L A + +A+R+F M + P+I Y+++ L + +
Sbjct: 156 IKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREM-GTMHCSPNIITYNTLINGLCKNEM 214
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E L++ + K L P ++ Y+ ++ H+ + ++ Q
Sbjct: 215 FGEAYNLVKELLDKG---------------LNPGVITYSMLMKGLCLDHKVEKALQLWNQ 259
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ G KP + + + + GK L + M + A +++ L+ F+++G
Sbjct: 260 VTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
I A+ + + G+ Y LC+ R DA+L
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 171/389 (43%), Gaps = 38/389 (9%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
TKL++ L + G+PHEA+ IFN + E+ + P I Y ++ L ++ + L+ ++
Sbjct: 47 TKLMSTLIRKGKPHEAVTIFNSLTEEGH-KPTIITYTTLVAALTRLKRFNSIPSLLSKVE 105
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ K PD +++NA++NA S + +F+++++ G KP+ +T
Sbjct: 106 ENGVK---------------PDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTST 150
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEA-IGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ ++ G+ + M + G TY +L++A+ + ++ EA + M
Sbjct: 151 FNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKM 210
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGG 469
G+ Y LA NG +A ++ K++ + KP E T +I G
Sbjct: 211 VNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEG 270
Query: 470 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTRANSSGYTF 525
++ + + MK+ PN N+++K Y + D +A L EE
Sbjct: 271 NMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFG--------- 321
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+KPD TYS+++ A +++ + E ++ M + + D ++ L RA
Sbjct: 322 -------IKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRA 374
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
G+ E +S+ + G + + FT ++
Sbjct: 375 GQPDKAEALLNSMTKYGLQANVVIFTTII 403
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 133/295 (45%), Gaps = 25/295 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++ ++ +G+ HEA++IF M ++C P + ++++ G VG E +KL+E
Sbjct: 114 ILFNAMINAFSDSGKVHEAMKIFRKM-KECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLE 172
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M Q D ++P+ YN ++ A ++ + + V ++ SG++P
Sbjct: 173 MMIQ--------------DGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPD 218
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI--GALTYKVLVRAFWEEGKINEAVAA 406
TY Q+G+ D KM + + T +++R + +EG + EA+
Sbjct: 219 IVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRF 278
Query: 407 VRNMEQRGVVGTASVYYELA---CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ M++ GV V+ L + + ++A+ ++E+ KP +T++ ++
Sbjct: 279 LYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEF----GIKPDVVTYSTIMN 334
Query: 464 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
+ G +D+C IF M K EP+I + + K Y R KA+ L T+
Sbjct: 335 AWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTK 389
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 133/325 (40%), Gaps = 28/325 (8%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ S+ + K R M + G T L+KG G G +AM +L+ + ++
Sbjct: 119 MINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMM--IQ 176
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D + Y L+ EA + + M+ + + PDI Y+++A Q G
Sbjct: 177 DGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMV-NSGMQPDIVTYNTLARAFAQNGET 235
Query: 281 KELVKLIERMRQ-----KPSKRIKNMHRKNW-----------------DPVLEPDLVVYN 318
+LI +M+Q KP++R + + + + + P+ VV+N
Sbjct: 236 DNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFN 295
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+++ + GV + + G+KP TY M SG D E F M K+
Sbjct: 296 SLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKA 355
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
Y +L + + G+ ++A A + +M + G+ ++ + C G+ A
Sbjct: 356 EIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCA 415
Query: 439 MLVVEKIKSLRHSKPLEI-TFTGLI 462
+ + EK+ + PL + T+ LI
Sbjct: 416 LRLYEKMNEM--GTPLNLKTYETLI 438
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 65/162 (40%), Gaps = 15/162 (9%)
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
++E+ + PD+ Y ++ GL+ ++ + M + +EPD
Sbjct: 316 LMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAE---------------IEPD 360
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ Y+ + V + Q + + K GL+ + + + +GK D +
Sbjct: 361 IQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYE 420
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
KM + G + TY+ L+ + E + +A + ME+ GV
Sbjct: 421 KMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGV 462
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 22/293 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y L+ L KAGR EA ++ M PD+ AY S L + G + + +++E
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKAS-GCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKP 347
+MR D +P++V YN +L+ S + + +Q+ S G
Sbjct: 247 QMR---------------DSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ Y ++ + + G+ MA++G +TY LV + GKI EAV AV
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH----SKPLEITFTGLII 463
R M G A Y L LC+ GR +A +VE++ S P T+ LI
Sbjct: 352 REMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIG 411
Query: 464 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
G IDD + FQ M+ C+P+ + + +++ +R+ +A+ + E
Sbjct: 412 GLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 170/390 (43%), Gaps = 34/390 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ L+ K GRP + R+ M ++ P++ +Y+ GLL+ L KL E
Sbjct: 11 VTFNALVNGFSKQGRPGDCERLLETMAAR-DIQPNVVSYN---------GLLEGLCKL-E 59
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R + + +++M + PD+V Y+ +L+ + + + + K++ GL+P
Sbjct: 60 RWHEA-EELVRDMISRGGRST--PDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPD 116
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A Y + + +S + E +M ++G +T+ L+ E + A + ++
Sbjct: 117 ALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ 176
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M GV Y L LC GR Q+A ++E++K+ P + ++ +
Sbjct: 177 KMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA-SGCAPDVVAYSSFVYGLCKS 235
Query: 469 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G + D + + M+D H +PN+ T N +L ++ A E+ E+ ++ G +
Sbjct: 236 GKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVG 295
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
YS++++ + + V + MA +GC+ D ++ L+ +AGK
Sbjct: 296 ------------YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343
Query: 588 CHLLEHAFDSLLEA---GEIPHPLFFTEML 614
+E A +++ E G P+ + + ++
Sbjct: 344 ---IEEAVEAVREMAMEGCKPNAVTYCSLV 370
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 147/361 (40%), Gaps = 33/361 (9%)
Query: 223 RDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLL 280
RD++ V Y LL L K R HEA + M+ PD+ Y ++ + G +
Sbjct: 39 RDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKV 98
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+E +L++ + + L PD ++Y V+ + S + + +++
Sbjct: 99 EESRELLKEVISRG---------------LRPDALMYTKVVASLCKSARLGEALELLEEM 143
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
++G P+ T+ + + ++ +KMA SG +TY L+ + G++
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRL 203
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
EA + M+ G Y LC +G+ DA V+E+++ H P +T+
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRD-SHHDPNVVTYNT 262
Query: 461 LIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
++ G ID + + + M D C N+ + ++ + +A+ + E RA
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARA 322
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
+PD TYSS++ A + E + MA+ GC+ + + L
Sbjct: 323 GC-------------RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369
Query: 579 L 579
+
Sbjct: 370 V 370
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 170/415 (40%), Gaps = 35/415 (8%)
Query: 196 LLKGLGDKGSWRQAMSVL-DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
LL+GL W +A ++ D + + R Y+ LL+ KAG+ E+ + +
Sbjct: 51 LLEGLCKLERWHEAEELVRDMIS--RGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEV 108
Query: 255 LEDCNLYPDIAAYHSVAVTLGQ----------------VGLLKELVK---LIERM-RQKP 294
+ L PD Y V +L + G L+ LI R+K
Sbjct: 109 ISR-GLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKN 167
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ ++ +K ++ D+V YN +++ + + + + ++++ SG P Y
Sbjct: 168 LEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + +SGK H+ +M S +TY ++ + GKI+ A+ + M
Sbjct: 228 FVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287
Query: 415 VVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G V Y LC GR Q+A V+E + + +P +T++ L+ G I++
Sbjct: 288 GCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM-ARAGCRPDVVTYSSLVNGLCKAGKIEE 346
Query: 474 CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ + M + C+PN T +++ ++A+ + EE + G+
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHH-------- 398
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
P TY++++ A + + ++ M GC D ++ ++ +R+G+
Sbjct: 399 CPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 103/255 (40%), Gaps = 27/255 (10%)
Query: 199 GLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML--E 256
GL G A VL+ ++D + Y +L L K+G+ AL + M +
Sbjct: 231 GLCKSGKVLDAHQVLEQ---MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
C L ++ Y +V L ++G +E ++E M + + PD+V
Sbjct: 288 GCGL--NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCR---------------PDVVT 330
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y++++N + + + +++ G KP+A TY + + G+ +M+
Sbjct: 331 YSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMS 390
Query: 377 KSGEAIGAL-----TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
G TY L+ + G+I++A+ + M +G Y + L
Sbjct: 391 SGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450
Query: 432 NGRWQDAMLVVEKIK 446
+GR A +++ +++
Sbjct: 451 SGRALQAEMILSEVR 465
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 96/247 (38%), Gaps = 15/247 (6%)
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P +TF L+ G DC + + M +PN+ + N +L+ + + + +A+EL
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+ + G PD TYS++L A + E + K + G + D
Sbjct: 68 VRD-----------MISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPD 116
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
+ ++ ++ + + ++ AG P + F ++ + N E A +L+
Sbjct: 117 ALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ 176
Query: 632 AMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 691
MA + + L + + E+LL + A+ V S ++ LC
Sbjct: 177 KMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM---KASGCAPDVVAYSSFVYGLC 233
Query: 692 RSEKERD 698
+S K D
Sbjct: 234 KSGKVLD 240
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/325 (16%), Positives = 126/325 (38%), Gaps = 50/325 (15%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ V +NA++N + + + + ++P+ +Y +E + + ++ E
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 372 FRKMAKSG--EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
R M G +TY L+ + + GK+ E+ ++ + RG+ A +Y ++ L
Sbjct: 68 VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
C + R +A+ ++E++ ++ C P +
Sbjct: 128 CKSARLGEALELLEEM-----------------------------------IRAGCCPTL 152
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N ++ R A L ++ +SG +K D TY+++++
Sbjct: 153 ITFNTLISGCCREKNLEMADSLLQKMA---ASG----------VKADVVTYNTLMDGLCK 199
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A + + E + + M SGC D ++ + ++GK + + ++ P+ +
Sbjct: 200 AGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVT 259
Query: 610 FTEMLIQAIVQSNYEKAVALINAMA 634
+ +L + A+ ++ MA
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMA 284
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 175/393 (44%), Gaps = 34/393 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L +G ++A+S+L + G ++ + Y L+A +AG A R+ +ML
Sbjct: 156 LIRALCGRGHRKEALSILRDMRGAGCGPNVVT---YNTLVAAFFRAGEVDGAERLVGMML 212
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D L P++ ++S+ + + G +++ K+ + M ++ L PD V
Sbjct: 213 -DGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG---------------LAPDGV 256
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++ + VF ++ + G+ P T+ + VM ++G + R+M
Sbjct: 257 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQM 316
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G + +T+ L+ F ++G +++A+ AVR M Q + + Y L C GR
Sbjct: 317 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRM 376
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+A ++ ++++ + KP +T++ +I + + Q M + P+ T ++
Sbjct: 377 DEARELLHEMEA-KGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 435
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+++V S A LF+ + L+PDE+TY+S+++ E
Sbjct: 436 LIRVLCEEKRLSDAHVLFKNMIKLG-------------LQPDEFTYTSLIDGHCKEGNVE 482
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
++ M +G D ++ L+ S++ +
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 160/395 (40%), Gaps = 34/395 (8%)
Query: 230 VYTKLLAILGKAGRPH--EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
VYT + I GR H EAL I M P++ Y+++ + G + +L+
Sbjct: 150 VYTYNILIRALCGRGHRKEALSILRDM-RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLV 208
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
M D L+P+LV +N+++N + + + VF ++ + GL P
Sbjct: 209 GMM---------------LDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAP 253
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+Y + ++G F +M + G +T+ L+ + G + AV V
Sbjct: 254 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLV 313
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
R M +RG+ + L C G DA+L V ++ R KP + + LI
Sbjct: 314 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCR-IKPSVVCYNALINGYCM 372
Query: 468 GGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +D+ + M+ +P++ T + ++ Y +N A EL ++
Sbjct: 373 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG------- 425
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+ PD TYSS++ + ++K M G Q D+ + L+ + G
Sbjct: 426 ------VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 479
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
D +++AG +P + ++ +LI + +S
Sbjct: 480 NVERALSLHDKMVKAGVLPDVVTYS-VLINGLSKS 513
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 155/378 (41%), Gaps = 62/378 (16%)
Query: 303 RKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL---- 354
R+ +D +L P++ YN ++ A K + + +R +G P+ TY
Sbjct: 135 RRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAA 194
Query: 355 ---AMEV----------------------------MLQSGKYDLVHEFFRKMAKSGEAIG 383
A EV M ++GK + + F +M + G A
Sbjct: 195 FFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPD 254
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
++Y LV + + G +EA++ M Q+G++ + L +C G + A+ +V
Sbjct: 255 GVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVR 314
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN 502
+++ R + E+TFT LI G +DD + + M+ +P++ NA++ Y
Sbjct: 315 QMRE-RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMV 373
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA-TAHQWEYFEYVYK 561
+A+EL E + LKPD TYS+++ A FE + +
Sbjct: 374 GRMDEARELLHEM-------------EAKGLKPDVVTYSTIISAYCKNCDTHSAFE-LNQ 419
Query: 562 GMALSGCQLDQTKHAWL---LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
M G D ++ L L E R H+L F ++++ G P +T ++
Sbjct: 420 QMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVL---FKNMIKLGLQPDEFTYTSLIDGHC 476
Query: 619 VQSNYEKAVALINAMAYA 636
+ N E+A++L + M A
Sbjct: 477 KEGNVERALSLHDKMVKA 494
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 22/274 (8%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M Q G+M L+ + G+ A+++ V ++++ + +T L+ K
Sbjct: 281 MTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL---VRQMRERGLQMNEVTFTALIDGFCK 337
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G +AL M C + P + Y+++ VG + E +L+ M K
Sbjct: 338 KGFLDDALLAVRGM-RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG------ 390
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
L+PD+V Y+ +++A + F + +Q+ + G+ P A TY + V+
Sbjct: 391 ---------LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC 441
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ + H F+ M K G TY L+ +EG + A++ M + GV+
Sbjct: 442 EEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVV 501
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
Y L L + R +A ++ K L H +P+
Sbjct: 502 TYSVLINGLSKSARAMEAQQLLFK---LYHEEPI 532
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 118/359 (32%), Gaps = 70/359 (19%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
VR M + GL E L+ G KG A L V G++ R S Y L+
Sbjct: 312 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA---LLAVRGMRQCRIKPSVVCYNALIN 368
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
GR EA + + M E L PD+ Y ++ + +L ++M +K
Sbjct: 369 GYCMVGRMDEARELLHEM-EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG-- 425
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+ PD + Y++++ + +FK + K GL+P TY +
Sbjct: 426 -------------VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV------------------------- 391
+ + G + KM K+G +TY VL+
Sbjct: 473 DGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPI 532
Query: 392 -------------------------RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ F +G +NEA ++M R SVY L
Sbjct: 533 PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLI 592
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC 485
C G A L K R P + LI + G + + + Q + + C
Sbjct: 593 HGHCRAGNVMKA-LSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCC 650
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 183/450 (40%), Gaps = 36/450 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D ++E K ++ M + G L+ L G + A ++ +
Sbjct: 311 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML-- 368
Query: 220 KDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+RD K S F + ++ + K G+ A +F LM D PDI Y+ + +
Sbjct: 369 --RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM-TDRGCLPDIYTYNIMISGACRAN 425
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ + +L+ERM + PD+V YN++++ + Q + V++
Sbjct: 426 RIDDARQLLERMTEAGCP---------------PDVVTYNSIVSGLCKASQVDEAYEVYE 470
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
LR G T ++ + +S + D + R+M ++G A + Y +L+ F +
Sbjct: 471 VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD 530
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
++++++A M +G V T Y + LC + R +D ++++ + R P I +
Sbjct: 531 QLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE-RGVTPDAIVY 589
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
T +I D+ +++ MK C P + T N ++ + +A L E
Sbjct: 590 TSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLE---- 645
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+ DG PD TY+S+ + + + + +++ M GC ++
Sbjct: 646 -------VMESDGC--LPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSL 696
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
LL + K ++ LEAG P
Sbjct: 697 LLTKLVAEEKMDQAMEIWEEALEAGADVDP 726
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 178/448 (39%), Gaps = 41/448 (9%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-PDIAA 266
+A+ DW G + S+F LL+ + + EA +F C L PD
Sbjct: 114 KAVKFFDWCTGQPGYK--HSKFTCNCLLSAFVRKKKAQEAYDLFKN--HRCGLCSPDSIT 169
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN----------------MHRKNWD 307
Y ++ + ++ +L++ M ++ P + N +H ++
Sbjct: 170 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 229
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P ++ Y +++A S + + + + ++G P+ TY + + G D
Sbjct: 230 RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 289
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
F +M ++ + TY +L+ + ++ + + ++ M + G Y L
Sbjct: 290 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 349
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
L +G++ DA + + + R KP TF +I G +D +FQ M D C
Sbjct: 350 SLVKSGKYIDAFNLAQMMLR-RDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCL 408
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+I T N M+ R + A++L E T A G P PD TY+S++
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEA-----------GCP--PDVVTYNSIVSG 455
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
A Q + VY+ + G LD + L+ ++ + E + G P
Sbjct: 456 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515
Query: 607 PLFFTEMLIQAIVQSN-YEKAVALINAM 633
+ +T +LI +++ +K++A + M
Sbjct: 516 VVAYT-ILIHGFCKADQLDKSLAFFSEM 542
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/511 (18%), Positives = 201/511 (39%), Gaps = 67/511 (13%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-----SRF 229
++ + M + G++ ++KGL D G A L RD++ S
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA---------LVHYRDMQRNCAPSVI 237
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ L K+ R +A I M+E P++ Y+++ ++G + E V L +
Sbjct: 238 TYTILVDALCKSARISDASLILEDMIEA-GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQ 296
Query: 290 M---------------------RQKP---SKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
M +++P +K ++ M + EP+ + YN ++++ V
Sbjct: 297 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC----EPNFITYNTLMDSLV 352
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
S ++ F + + + + KPS T+ L +++ + G+ DL +E F+ M G
Sbjct: 353 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY 412
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY +++ +I++A + M + G Y + LC + +A V E +
Sbjct: 413 TYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 472
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
++ + + +T + LI +DD + + M ++ P++ ++ + + D
Sbjct: 473 RNGGYFLDV-VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 531
Query: 505 FSKAKELFEETTRANSS----GYTFLSG---------DGAPL---------KPDEYTYSS 542
K+ F E Y+ + DG L PD Y+S
Sbjct: 532 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTS 591
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
+++ + ++ +YK M +GC + L+ + + + H + + G
Sbjct: 592 VIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDG 651
Query: 603 EIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+P + + + + ++KA L AM
Sbjct: 652 CLPDTVTYNSVFDGFWKSAEHDKAFRLFQAM 682
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 157/383 (40%), Gaps = 43/383 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y ++ + G + + + L+ M + +P+ V YNA L
Sbjct: 258 PDVVIYSTLINGFSEQGHVDQALDLLNTM------------------LCKPNTVCYNAAL 299
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W+ + + ++ + G P+ AT+ + + + Q+ D E +M K G
Sbjct: 300 KGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 359
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAML 440
+ Y +++ + E G++++A+ + +M + +G +V C RW DA
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKG----FCRAERWHDASE 415
Query: 441 VVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
++ ++ R PL E+TF LI G ++ +F+ M + C P+I T +++L
Sbjct: 416 LIAQM--FRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNG 473
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+S + A +LF P KPD ++Y+++L+ A +WE
Sbjct: 474 FSEQGLVEVAIQLFRSM----------------PCKPDIFSYNAVLKGLCRAARWEDAGE 517
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
+ M C ++ L+ + G + + G P + ++
Sbjct: 518 LIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFS 577
Query: 619 VQSNYEKAVALINAMAYAPFHIT 641
Q + A+ L++ M+ P I+
Sbjct: 578 EQGRLDDALKLLSTMSCKPDAIS 600
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 141/329 (42%), Gaps = 43/329 (13%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD Y+ + +L + G + + ++L+ M V +PD + +NAVL
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSM------------------VCKPDALGFNAVL 401
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W + Q+ + T+ + ++++ Q+G + + F +M +
Sbjct: 402 KGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCT 461
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-L 440
+TY L+ F E+G + A+ R+M + + + Y + LC RW+DA L
Sbjct: 462 PDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFS---YNAVLKGLCRAARWEDAGEL 518
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
+ E + + P E+TF LI S G +D I + + M ++ P+I T NA++ +
Sbjct: 519 IAEMVG--KDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF 576
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
S A +L + KPD +Y+S L+ A +W+ E +
Sbjct: 577 SEQGRLDDALKLLSTMS----------------CKPDAISYNSTLKGLCRAERWQDAEEL 620
Query: 560 YKGMALSGCQLDQT--KHAWLLVEASRAG 586
M + C ++ K+A L+ +RAG
Sbjct: 621 VAEMLRNKCTPNEVTFKYANHLLMPNRAG 649
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 127/331 (38%), Gaps = 25/331 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN VL + +W+ + ++ ++ P+ T+ + Q+G D
Sbjct: 186 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 245
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-C 428
+ +M + G + Y L+ F E+G +++A+ + M + +V Y A
Sbjct: 246 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM----LCKPNTVCYNAALKG 301
Query: 429 LCNNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
LC RW+D L+ E ++ + P E TF+ LI S +D + + + M+ + CE
Sbjct: 302 LCIAERWEDIGELMAEMVR--KGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 359
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+ N ++ S A L KPD ++++L+
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSMV----------------CKPDALGFNAVLKG 403
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
A +W + M C L + L+ + G + F+ + P
Sbjct: 404 FCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPD 463
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
+ ++ +L Q E A+ L +M P
Sbjct: 464 IVTYSSLLNGFSEQGLVEVAIQLFRSMPCKP 494
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 116/296 (39%), Gaps = 34/296 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ L ++G A+ +L+ + D + +L +A R H+A + M
Sbjct: 368 IINSLSERGRVDDALRLLNSMVCKPDA------LGFNAVLKGFCRAERWHDASELIAQMF 421
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+DC L ++ + L Q GL+ ++ E+M P R PD+
Sbjct: 422 RDDCPLIE--MTFNILIDMLCQNGLVNYATQVFEQM---PRYRCT------------PDI 464
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
V Y+++LN +G+ V QL R KP +Y ++ + ++ +++ E
Sbjct: 465 VTYSSLLNG----FSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIA 520
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M +T+ +L+ + ++G ++ A+ + M G Y L G
Sbjct: 521 EMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQG 580
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
R DA+ K+ S KP I++ + D + M ++ C PN
Sbjct: 581 RLDDAL----KLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPN 632
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 169/418 (40%), Gaps = 53/418 (12%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+EP++VVY+++L S +W+ V VF ++ + G++P Y ++ + + GK H
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
M + G +TY VL+ +EG + EA+ ++ M ++GV Y L L
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 430 CNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
+ +AM L+ E ++ KP +TF +I D G + + M++ C
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ T N ++ R KA EL +E T L+PD +TYS +++
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG-------------LEPDSFTYSILIKGF 407
Query: 548 ATAHQW-----------------EYFEYVYKGMALSGCQ-------------------LD 571
Q E F Y+ +A+ C+ LD
Sbjct: 408 CKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM--CEQGMMERARNLFNEMDNNFPLD 465
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
++ ++ A +AG + S+++ G P + ++ ++ + E A ++
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525
Query: 632 AMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 689
M + F + L + + +K+ +L+ + N A +S LS +L A
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVA 583
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 151/392 (38%), Gaps = 36/392 (9%)
Query: 235 LAILGKAGRPHEA------LRIFNL-----MLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
LA+L + GR A LR+ L +L+ D +Y++V L + G
Sbjct: 37 LAVLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRA 96
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
L+ M +P P P+ V Y ++ A + + +R +
Sbjct: 97 GALLRAMSLEPH------------PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSA 144
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G++ TYG + + + + D E +M +SG + Y L++ + + G+ +
Sbjct: 145 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 204
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
M ++G+ +Y L LC G+ + A V++ + R +P +T+ LI
Sbjct: 205 GKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR-RGLEPNVVTYNVLIN 263
Query: 464 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
G + + I + + M + P++ T N ++K S +A L EE R +
Sbjct: 264 CMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNI- 322
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+KP+ T++S+++ + V M +GC ++ + L+
Sbjct: 323 ----------VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
R K D + G P ++ ++
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILI 404
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 178/433 (41%), Gaps = 40/433 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ L G ++A V+D + +R L+ V Y L+ + K G EA+ + M
Sbjct: 226 LIDSLCKVGKAKKAHGVMDMMV----RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM 281
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E + PD+ Y+++ L V + E + L+E M R KN +++P++
Sbjct: 282 SEK-GVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM-----VRGKN--------IVKPNV 327
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V +N+V+ + + F V + ++G + TY L + +L+ K E +
Sbjct: 328 VTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE 387
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G + TY +L++ F + +++ A + M RG+ Y L +C G
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGM 447
Query: 435 WQDAMLVVEKIKSLRHSKPLEIT-FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
+ A + ++ PL++ ++ +I + G + + + + D P+ T
Sbjct: 448 MERAR---NLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTY 504
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ ++ +++++ A + ++ T +SG+ PD + S+++ +T +
Sbjct: 505 SIVINMFAKSGDMEAANGVLKQMT---ASGFL----------PDVAVFDSLIQGYSTKGE 551
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVE--ASRAGKCHLLEHA-FDSLLEAGEIPHPLF 609
+ + M LD + L AS GK L F + + G I P
Sbjct: 552 INKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAEISKGNINSPQE 611
Query: 610 FTEMLIQAIVQSN 622
++L Q+N
Sbjct: 612 LMKVLHNVCPQTN 624
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 21/332 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL AM ++ + + + + F Y LL L R EAL + ++M
Sbjct: 133 LLKGLCADKRTSDAMDIV--LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA 190
Query: 256 ED--CNLYPDIAAYHSVAVTLGQVGLLKELV--KLIERMRQKPSKRIKNMHRKNWDPVLE 311
+D PD+ +Y++V G KE + KL + K + + M + +
Sbjct: 191 DDRGGGSPPDVVSYNTVLN-----GFFKEGIQTKLTAQAMDKAMEVLNTMVKNG----VM 241
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD + YN++L+ S Q K K++R G++P+ TY M + ++G+ +
Sbjct: 242 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 301
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCL 429
F M K G TY+ L++ +EG++ E+ M + GV Y L CCL
Sbjct: 302 FDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 361
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
G+ +A ++ + S+ KP +T+ LI +DD +++F+ M PN
Sbjct: 362 A--GKMDEATKLLASMVSV-GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
I T N +L+ + AKEL+ T++ +
Sbjct: 419 IITYNIILQGLFHTRRTAAAKELYVSITKSGT 450
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/423 (18%), Positives = 163/423 (38%), Gaps = 74/423 (17%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TY + + ++G+ DL + K G
Sbjct: 65 VARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFR 124
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+T+ L++ + + ++A+ V R M + G + Y L LC+ R Q+A+
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE 184
Query: 441 VVEKIKSLR--HSKPLEITF-------------TGLIISSMD-----------GGHIDDC 474
++ + R S P +++ T L +MD G + DC
Sbjct: 185 LLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDC 244
Query: 475 ISIFQHMKDHC--------------------EPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
++ + +C EPN+ T ++++ +N ++A+++F+
Sbjct: 245 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 304
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
T+ L+PD TY ++L+ + E ++ M G + D
Sbjct: 305 MTKRG-------------LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIIT 351
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM- 633
+ L+ AGK S++ G P + + ++ S + A+AL M
Sbjct: 352 YNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMV 411
Query: 634 --AYAPFHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHAL 690
+P IT + LF + +++ + + +++ +S + LH L
Sbjct: 412 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI-------TKSGTQLELSTYNIILHGL 464
Query: 691 CRS 693
C++
Sbjct: 465 CKN 467
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/512 (20%), Positives = 208/512 (40%), Gaps = 80/512 (15%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKR----DLK 226
T+K +F + G TE +L+ LG R + ++++ ++ + L+
Sbjct: 92 TSKALQFFNWAQEMGYTHTEQSYFSMLEILGRN---RHLNTARNFLFSIEKRSRGIVKLE 148
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+RF + L+ +AG E++++F +M + + P + ++S+ L L
Sbjct: 149 ARF-FNSLMRNFNRAGLFQESIKVFTIM-KSHGVSPSVVTFNSL------------LTIL 194
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLE-----PDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
++R R NM +K +D +L PD +N ++ + F +F L
Sbjct: 195 LKRGRT-------NMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLS 247
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG--ALTYKVLVRAFWEEGK 399
+ G +P TY ++ + ++GK + + + M K + +TY L+R + + +
Sbjct: 248 RFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKRE 307
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
I +A+A M +G+ Y L LC +++ ++E P TF
Sbjct: 308 IEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFN 367
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
L+ G++DD + +F+ M + +P+ T +A+++ + + KA++L ++
Sbjct: 368 TLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLER 427
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
LSGDG KP Y+ + F+Y+ C+ +TK A
Sbjct: 428 K----ILLSGDGC--KPLVAAYNPI------------FKYL--------CETGKTKKA-- 459
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML---IQAIVQSNYEKAVALINAMAY 635
E AF L+ G P + T ++ + +S YE V ++
Sbjct: 460 -------------EKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFL 506
Query: 636 APFHITERQWTELFESNEDRISRDKLEKLLNA 667
F E L ++ ++ LEK+L +
Sbjct: 507 PDFETYESLINGLLHMDKPLLALQSLEKMLRS 538
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 21/289 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ + K G AL +N M +D P++ Y+++ G++GL ++ +K++
Sbjct: 247 TYTALMNVCIKCGNCPLALDTYNHMRQD-GACPNVVTYNTLIDVYGKMGLWEQGIKVLTL 305
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ + +EP L YN ++ AC Q + V+K++ G P+A
Sbjct: 306 MKTEG---------------VEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNA 350
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + ++G+ D V E F++M G +TY L+ A + G+ A+
Sbjct: 351 TTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNE 410
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M G + Y L +W+ A V E+++ P +TFT LI S GG
Sbjct: 411 MAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQK-GGCTPDVVTFTALISSYEKGG 469
Query: 470 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMF---SKAKELFEE 514
+ ++ M+ C+P+ NA++ + KA LF++
Sbjct: 470 QWRRALGAYEQMRLQRCKPDAIVFNAIIDTLWETGVIWAQRKALALFQQ 518
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 143/343 (41%), Gaps = 31/343 (9%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+ Y A+++ C+ + K++R ++ + TY M V ++ G L + +
Sbjct: 209 DVYTYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTY 268
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLC 430
M + G +TY L+ + + G + + + M+ GV Y L AC +C
Sbjct: 269 NHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMC 328
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
R +AM V +++ +S P T+ LI + G +D + +FQ M CE ++
Sbjct: 329 GQPR--EAMAVYKRMLDEGYS-PNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSV 385
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++++ + + A ELF E ++G+G P+ TY+S++ A A
Sbjct: 386 ITYSSLISACEKAGQWELALELFNE-----------MAGEGC--IPNTVTYNSLITACAQ 432
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
QWE V++ M GC D L+ + G+ A++ + P +
Sbjct: 433 GAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIV 492
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPF-------HITERQW 645
F AI+ + +E V A A F H +++W
Sbjct: 493 F-----NAIIDTLWETGVIWAQRKALALFQQAVEDGHFKQQRW 530
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 140/339 (41%), Gaps = 25/339 (7%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL L KAG A+ IF + ++ A H +A +L V ++ + + Q+
Sbjct: 175 LLKDLSKAGLGFRAVEIFEWLR-------NLDANHPLA-SLCDVYTYTAMISMC--IYQQ 224
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
R ++ ++ +E ++ Y A++N C+ + +R+ G P+ TY
Sbjct: 225 DVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYN 284
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
++V + G ++ + M G TY L+ A G+ EA+A + M
Sbjct: 285 TLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDE 344
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G A+ Y L G+ M V +++ + + IT++ LI + G +
Sbjct: 345 GYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSV-ITYSSLISACEKAGQWEL 403
Query: 474 CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ +F M + C PN T N+++ ++ + KA E+FE+ + +
Sbjct: 404 ALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCT----------- 452
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
PD T+++++ + QW Y+ M L C+ D
Sbjct: 453 --PDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPD 489
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W Q + VL + + L++ Y L+ G+P EA+ ++ ML
Sbjct: 286 LIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRT---YNTLIIACNMCGQPREAMAVYKRML 342
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ P+ Y+++ G+ G L +++++ + M K +R ++
Sbjct: 343 DE-GYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCER---------------SVI 386
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+++++AC + QW+ +F ++ G P+ TY + Q +++ E F +M
Sbjct: 387 TYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQM 446
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
K G +T+ L+ ++ + G+ A+ A M
Sbjct: 447 QKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQM 481
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 155/370 (41%), Gaps = 32/370 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+ + ++ L G + E ++L++RM + K PDL+ N ++
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK---------------PDLITINTLV 200
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N S + + ++ + G +P+A TYG + VM +SG+ L E RKM +
Sbjct: 201 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD-AML 440
+ A+ Y +++ + G ++ A ME +G+ Y L CN GRW D A L
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
+ + IK R P +TF+ LI S + G + + + + M P+ T +++ +
Sbjct: 321 LRDMIK--RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
+ + KA ++ + P+ T++ ++ A++ + +
Sbjct: 379 CKENHLDKANQMVDLMVSKGCD-------------PNIRTFNILINGYCKANRIDDGLEL 425
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
++ M+L G D + L+ GK ++ + F ++ P+ + + +L
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 620 QSNYEKAVAL 629
EKA+ +
Sbjct: 486 NGESEKALEI 495
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 162/379 (42%), Gaps = 38/379 (10%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
TA + +R M + + + ++ GL GS A ++ + ++ K +
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE---MEMKGITTNIIT 300
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ AGR + ++ M++ + P++ + + + + G L+E +L + M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSA 349
+HR + PD + Y ++++ C +H K V + K G P+
Sbjct: 360 ----------IHRG-----IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK-GCDPNI 403
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ + + ++ + D E FRKM+ G +TY L++ F E GK+N A +
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DG 468
M R V Y L LC+NG + A+ + EKI+ + L+I +II M +
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE--KSKMELDIGIYNIIIHGMCNA 521
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
+DD +F + +P + T N M+ + S+A+ LF + +
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK-----------ME 570
Query: 528 GDGAPLKPDEYTYSSMLEA 546
DG PD +TY+ ++ A
Sbjct: 571 EDGHA--PDGWTYNILIRA 587
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 105/259 (40%), Gaps = 15/259 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EP+ + ++ ++N + + ++ + G KP T + + SGK
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
KM + G A+TY ++ + G+ A+ +R ME+R + A Y + LC
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
+G +A + +++ ++ IT+ LI + G DD + + M K PN+
Sbjct: 275 KHGSLDNAFNLFNEME-MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T + ++ + + +A+EL +E + PD TY+S+++
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRG-------------IAPDTITYTSLIDGFCK 380
Query: 550 AHQWEYFEYVYKGMALSGC 568
+ + + M GC
Sbjct: 381 ENHLDKANQMVDLMVSKGC 399
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+E D+ +YN +++ + + + +F L G+KP TY + + + + G
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
FRKM + G A TY +L+RA +G ++V + +++ G AS ++ +
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST-IKMVIDM 622
Query: 430 CNNGRWQDAML 440
++GR + + L
Sbjct: 623 LSDGRLKKSFL 633
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 55/311 (17%), Positives = 118/311 (37%), Gaps = 16/311 (5%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+L + ++N + F ++ K G +P+ T+ + + G+ E
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M + G +T LV GK EA+ + M + G A Y + +C +
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGT 491
G+ AM ++ K++ R+ K + ++ +I G +D+ ++F M+ NI T
Sbjct: 242 GQTALAMELLRKMEE-RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ + + +L + + + P+ T+S ++++
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRK-------------INPNVVTFSVLIDSFVKEG 347
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ E ++K M G D + L+ + D ++ G P+ F
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 612 EMLIQAIVQSN 622
+LI ++N
Sbjct: 408 -ILINGYCKAN 417
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 145/348 (41%), Gaps = 33/348 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VYT L+ K G A ++F+ M E + PD AY +V L + G + E K+ +
Sbjct: 82 VYTTLIDGFCKLGNIQAAYKLFDEM-EKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNK 140
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + +EPD V Y +++ S + + F + Q+ +SGL P+
Sbjct: 141 MFSRG---------------VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNV 185
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + G+ D +E +M G + TY LV + G I +AV +
Sbjct: 186 VTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEE 245
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME G+ + L C G A ++ ++ R +P ITF L+ G
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLD-RGLQPTVITFNVLMNGFCMSG 304
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS-RNDMFSKAKELFEETTRANSSGYTFLS 527
++D + M + PN T N+++K Y RN+M R + Y +
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNM------------RCTTEIYKGMC 352
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
G + PD TY+ +++ A + +++K MA G L + +
Sbjct: 353 ARG--VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSY 398
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 139/346 (40%), Gaps = 24/346 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+V Y+ V+N + + V + ++++ GLKP+ TY + ++ +SGK D
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
R+M G + Y L+ F + G I A ME++ +V Y + C LC
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
G+ +A V K+ S R +P E+T+T LI G ++ S+ M + PN+
Sbjct: 128 CGKMMEADKVFNKMFS-RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYTFL------SGD----------- 529
T A+ + A EL E + N Y L SG+
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Query: 530 -GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
A + PD T++++++A + + + M G Q L+ +G
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
E +LE G +P+ + ++ Q +++N + M
Sbjct: 307 EDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMC 352
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 166/372 (44%), Gaps = 34/372 (9%)
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+ L V +K K + F YT+L+ LGK GR +A +F ML+D PD+ +++
Sbjct: 283 AALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNL 341
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH-- 328
LG+ G L++ +KL +M P++V YN V+ A S
Sbjct: 342 INILGRAGRLEDALKLFGKMDSLQCA---------------PNVVTYNTVIKAIFESKAP 386
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ W F++++ +G+ PS+ TY + ++ ++ + + +M + G Y
Sbjct: 387 ASEAALW-FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYC 445
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ + + A + +++ +A VY + N GR DA+ + ++K L
Sbjct: 446 SLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKL 505
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
S P T+ L+ + G ID+ S+ ++M+++ C P+I + N +L ++ +
Sbjct: 506 GCS-PDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKR 564
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A E+F + + + PD +Y+++L + A +E + + M L G
Sbjct: 565 AIEMFTKMKESE-------------IMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKG 611
Query: 568 CQLDQTKHAWLL 579
+ D ++ +L
Sbjct: 612 FEYDSITYSSIL 623
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 107/548 (19%), Positives = 222/548 (40%), Gaps = 42/548 (7%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
VLD DV++ + + +W +++ ++ ++ L+ L E + + W+ ++ M +S
Sbjct: 97 VLDIDVEIRAKI--QFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSP 154
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
+ ++LK LG +A+SV Y +K ++ + VY L+ +L G
Sbjct: 155 CSVGPAEWSEILKILGKAKMVNKALSVF---YQIKGRKCNPTATVYNTLILMLMHEGHHE 211
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN-- 300
+ ++N + + N PD Y ++ G++ +L + M++ P+++I
Sbjct: 212 KIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTI 271
Query: 301 --MHRK--NWDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
M+ K + L P + Y ++ + + +F + K G
Sbjct: 272 LAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGC 331
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAV 404
KP + ++ ++G+ + + F KM A +TY +++A +E + +EA
Sbjct: 332 KPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAA 391
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
M+ G+ ++ Y L C R + A+L++E++ + P + LI S
Sbjct: 392 LWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDE-KGFPPCPAAYCSLIDS 450
Query: 465 SMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ +FQ +K++C + V A M+K + S A +LF E + S
Sbjct: 451 LGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCS-- 508
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
PD YTY++++ A + + + M +GC D H +L +
Sbjct: 509 -----------PDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLA 557
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
+ G F + E+ +P + + +L +E A L+ M F
Sbjct: 558 KTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSI 617
Query: 644 QWTELFES 651
++ + E+
Sbjct: 618 TYSSILEA 625
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQE---L 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ G GR +A+ +F M + PD+ Y+++ + + G+
Sbjct: 468 KENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEM-KKLGCSPDVYTYNALMSGMIRAGM 526
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ E L+ MR+ PD+ +N +LN + K +F +
Sbjct: 527 IDEAHSLMRNMRENGCT---------------PDIKSHNIILNGLAKTGGPKRAIEMFTK 571
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+++S + P A +Y + + ++G +++ + R+M G ++TY ++ A GK
Sbjct: 572 MKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV---GK 628
Query: 400 INE 402
++E
Sbjct: 629 VDE 631
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 156/383 (40%), Gaps = 43/383 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y ++ + G + + + L+ M KP+ V YNA L
Sbjct: 75 PDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNT------------------VCYNAAL 116
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W+ + + ++ + G P+ AT+ + + + Q+ D E +M K G
Sbjct: 117 KGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 176
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAML 440
+ Y +++ + E G++++A+ + +M + +G +V C RW DA
Sbjct: 177 PDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKG----FCRAERWHDASE 232
Query: 441 VVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
++ ++ R PL E+TF LI G ++ +F+ M + C P+I T +++L
Sbjct: 233 LIAQM--FRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNG 290
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+S + A +LF P KPD ++Y+++L+ A +WE
Sbjct: 291 FSEQGLVEVAIQLFRSM----------------PCKPDIFSYNAVLKGLCRAARWEDAGE 334
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
+ M C ++ L+ + G + + G P + ++
Sbjct: 335 LIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFS 394
Query: 619 VQSNYEKAVALINAMAYAPFHIT 641
Q + A+ L++ M+ P I+
Sbjct: 395 EQGRLDDALKLLSTMSCKPDAIS 417
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 141/329 (42%), Gaps = 43/329 (13%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD Y+ + +L + G + + ++L+ M V +PD + +NAVL
Sbjct: 177 PDTVNYNIIINSLSERGRVDDALRLLNSM------------------VCKPDALGFNAVL 218
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W + Q+ + T+ + ++++ Q+G + + F +M +
Sbjct: 219 KGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCT 278
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-L 440
+TY L+ F E+G + A+ R+M + + + Y + LC RW+DA L
Sbjct: 279 PDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFS---YNAVLKGLCRAARWEDAGEL 335
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
+ E + + P E+TF LI S G +D I + + M ++ P+I T NA++ +
Sbjct: 336 IAEMVG--KDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF 393
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
S A +L + KPD +Y+S L+ A +W+ E +
Sbjct: 394 SEQGRLDDALKLLSTMS----------------CKPDAISYNSTLKGLCRAERWQDAEEL 437
Query: 560 YKGMALSGCQLDQT--KHAWLLVEASRAG 586
M + C ++ K+A L+ +RAG
Sbjct: 438 VAEMLRNKCTPNEVTFKYANHLLMPNRAG 466
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 126/329 (38%), Gaps = 25/329 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD YN VL + +W+ + ++ ++ P+ T+ + Q+G D +
Sbjct: 5 PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 64
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLC 430
+M + G + Y L+ F E+G +++A+ + M + +V Y A LC
Sbjct: 65 LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM----LCKPNTVCYNAALKGLC 120
Query: 431 NNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
RW+D L+ E ++ + P E TF+ LI S +D + + + M+ + CEP+
Sbjct: 121 IAERWEDIGELMAEMVR--KGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPD 178
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
N ++ S A L KPD ++++L+
Sbjct: 179 TVNYNIIINSLSERGRVDDALRLLNSMV----------------CKPDALGFNAVLKGFC 222
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A +W + M C L + L+ + G + F+ + P +
Sbjct: 223 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 282
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAP 637
++ +L Q E A+ L +M P
Sbjct: 283 TYSSLLNGFSEQGLVEVAIQLFRSMPCKP 311
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 117/297 (39%), Gaps = 36/297 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ L ++G A+ +L+ + D + +L +A R H+A + M
Sbjct: 185 IINSLSERGRVDDALRLLNSMVCKPDA------LGFNAVLKGFCRAERWHDASELIAQMF 238
Query: 256 -EDCNLYPDIAAYHSVAV-TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+DC P I ++ + L Q GL+ ++ E+M P R PD
Sbjct: 239 RDDC---PLIEMTFNILIDMLCQNGLVNYATQVFEQM---PRYRCT------------PD 280
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+V Y+++LN +G+ V QL R KP +Y ++ + ++ +++ E
Sbjct: 281 IVTYSSLLNG----FSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELI 336
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M +T+ +L+ + ++G ++ A+ + M G Y L
Sbjct: 337 AEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQ 396
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
GR DA+ K+ S KP I++ + D + M ++ C PN
Sbjct: 397 GRLDDAL----KLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPN 449
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 186/466 (39%), Gaps = 44/466 (9%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+R+ + +L K G+ + ++F ML++ + PD Y+ + + G + E +L
Sbjct: 7 NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDN-GISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E M LEP + YN++LNA + K +FK + + G +
Sbjct: 66 YEEMVSVG---------------LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFE 110
Query: 347 PSAATYGLAMEVMLQSGKY-DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P TY + + ++GK + + F KM + G + + Y L+ ++ I A
Sbjct: 111 PDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYK 170
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M +G V Y + LC G+ +A + + S R P + + GL+ +
Sbjct: 171 LLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPS-RGYSPDVVAYNGLLDAL 229
Query: 466 MDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA----NS 520
G D+ + +F+ + P+ T N++L +R +A+E+F++ + N
Sbjct: 230 YKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNG 289
Query: 521 SGYTF-LSGDGAPLK-----------------PDEYTYSSMLEASATAHQWEYFEYVYKG 562
+ Y+ LSG K PD TY+ +L+ + + ++
Sbjct: 290 ATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFST 349
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M +GC D ++ +L + K H FD ++E +P + F ++
Sbjct: 350 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 409
Query: 623 YEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKLEKLL 665
++A L++ M AP ++ I D+L + +
Sbjct: 410 LDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 455
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 154/376 (40%), Gaps = 33/376 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+ + V + + G L++ KL E+M D + PD + YN ++
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQM---------------LDNGISPDGIEYNILI 50
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + +++++ GL+PS TY + + K E F+ MA+ G
Sbjct: 51 DGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFE 110
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+TY ++ + GK+ EA+ + M +RG Y L LC + + A
Sbjct: 111 PDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYK 170
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVY 499
++E++ S + P IT+ ++ G + + F M P++ N +L
Sbjct: 171 LLEEMAS-KGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL 229
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
+ +A +LF++ + GY PD TY+S+L A + E +
Sbjct: 230 YKEGKTDEAMKLFKDVI---AKGYM----------PDTVTYNSILLGLARKSNMDEAEEM 276
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
+K M SGC + ++ +L RA K + + + G +P + + +L+ +
Sbjct: 277 FKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYN-ILLDGLC 335
Query: 620 QSN-YEKAVALINAMA 634
++N +KA L + M
Sbjct: 336 KTNLVDKAHELFSTMV 351
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 124/324 (38%), Gaps = 34/324 (10%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+ + A L++ L + E + +K + M G + +L GL G
Sbjct: 142 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVS 201
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A D + D+ Y LL L K G+ EA+++F ++ PD Y
Sbjct: 202 EAKQFFDSMPSRGYSPDV---VAYNGLLDALYKEGKTDEAMKLFKDVIAK-GYMPDTVTY 257
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKP-----------------SKRIKNMHRKNWDPVL 310
+S+ + L + + E ++ ++M +K++ + H+ VL
Sbjct: 258 NSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHK-----VL 312
Query: 311 E--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
E PD+V YN +L+ ++ +F + +G P +Y + + + ++
Sbjct: 313 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 372
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
K F +M + +T+ +L+ + GK++EA + M G Y
Sbjct: 373 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAY 432
Query: 423 YELACCLCNNGRWQDAMLVVEKIK 446
L L GR A + + +K
Sbjct: 433 NTLMNGLRKQGRHIQADRLTQAMK 456
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y+ + L + L+ + +L M D PD+V Y+ VL
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTM---------------VDNGCAPDIVSYSVVL 366
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N +++ +F ++ + L P T+ + M+ + ++GK D + +M SG A
Sbjct: 367 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCA 426
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ Y L+ ++G+ +A + M+++G
Sbjct: 427 PDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 148/349 (42%), Gaps = 32/349 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD +N+++N K + + + G P TY + + + G+ + E
Sbjct: 314 PDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEI 373
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCL 429
+M + +TY L+ +E ++ EA R + +G++ + L CL
Sbjct: 374 LNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 433
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
NN R AM + E++K+ + P E T+ LI S G +++ +S+ + M+ C N
Sbjct: 434 TNNHRL--AMELFEEMKT-KGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRN 490
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTFLSG--------------- 528
+ T N ++ + +N +A+E+F+E +R + T + G
Sbjct: 491 VVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMD 550
Query: 529 ----DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
+G LKPD++TY+S+L A + + + M +GC+ D + L++ S+
Sbjct: 551 QMLMEG--LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSK 608
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
AG+ L ++ G + P + ++ + +AV L M
Sbjct: 609 AGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREM 657
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 141/322 (43%), Gaps = 26/322 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G + +S +D + + D RF + L+ L + G AL I ++ML
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPD---RFTFNSLVNGLCRIGHVKHALEILDVML 343
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--------------------RQKPS 295
++ PDI Y+S+ L ++G ++E V+++ +M ++
Sbjct: 344 QE-GFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + R + PD+ +N+++ ++ + +F++++ G P TY +
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + G+ + ++M SG + +TY L+ F + +I EA ME +G+
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
Y L LC N R ++A +++++ + KP + T+ L+ G I
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQML-MEGLKPDKFTYNSLLTYFCRAGDIKKAA 581
Query: 476 SIFQHMKDH-CEPNIGTVNAML 496
I Q M + CEP+ T ++
Sbjct: 582 DIVQTMTSNGCEPDSVTYGTLI 603
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 20/293 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++PD+ +N ++ A +HQ + + +++ GL P T+ M+ ++ G +
Sbjct: 207 IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGAL 266
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M +G +T VLV + +EG+I E ++ + M G + L L
Sbjct: 267 RIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGL 326
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEP 487
C G + A+ +++ + P T+ LI G +++ + I M +D P
Sbjct: 327 CRIGHVKHALEILDVMLQ-EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDF-SP 384
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N T N ++ + + +A EL T S G + PD T++S+++
Sbjct: 385 NTVTYNTLISTLCKENQVEEATELARVLT---SKG----------ILPDVCTFNSLIQGL 431
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ +++ M GC D+ + L+ G+ LE A L E
Sbjct: 432 CLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR---LEEALSLLKE 481
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 117/294 (39%), Gaps = 24/294 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
L+ L + + + R++ G++ L++GL + R AM + + +
Sbjct: 391 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEE---M 447
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K K F Y L+ L GR EAL + M E ++ Y+++ +
Sbjct: 448 KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM-ESSGCSRNVVTYNTLIDGFCKNKR 506
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPV--------------------LEPDLVVYNA 319
++E ++ + M + R + D + L+PD YN+
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+L + K + + + +G +P + TYG + + ++G+ +L R + G
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+ TY +++A + E + +EAV R M ++G A Y + LC+ G
Sbjct: 627 MVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 192/471 (40%), Gaps = 53/471 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L++ L D+G A+S+LD + +R + V YT LL + + +A+ + + M
Sbjct: 149 LIRVLCDRGRVADALSLLDDML----RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEM 204
Query: 255 -LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ C P+I Y+ + + + G + + +L+ R+ PS +PD
Sbjct: 205 RAKGCT--PNIVTYNVIINGMCREGRVDDARELLNRL---PSYG------------FQPD 247
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
V Y +L S +W V +F ++ + P+ T+ + + + G + +
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M + G A +++ + ++G++++A + +M G Y + LC
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367
Query: 434 RWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
RW DA L+ E +++ + P E+TF I G I+ I + + M +H C + T
Sbjct: 368 RWDDAKELLNEMVRN--NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVT 425
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
NA++ + A ELF P KP+ TY+++L A
Sbjct: 426 YNALVNGFCVQGHIDSALELFRSM----------------PCKPNTITYTTLLTGLCNAE 469
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPL 608
+ + + M C + L+ + G LE A + ++E G P+ +
Sbjct: 470 RLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKG---FLEEAIELVEQMMEHGCTPNLI 526
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 656
+ +L + E A+ L++ + +P IT + S EDRI
Sbjct: 527 TYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGIL-SKEDRI 576
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/462 (20%), Positives = 182/462 (39%), Gaps = 49/462 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++ TKL+ L + GR +A R+ E D+ AY+++ + G L +LI
Sbjct: 77 YLCTKLIRNLCRRGRTSDAARVLRAA-EGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIG 135
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M PV PD Y ++ + + + + G +P+
Sbjct: 136 SM-----------------PV-APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPN 177
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + +E M ++ ++ +M G +TY V++ EG++++A +
Sbjct: 178 VVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLN 237
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ G Y L LC + RW D L E ++ ++ P E+TF LI
Sbjct: 238 RLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMME--KNCMPNEVTFDMLIRFFCR 295
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
GG ++ I + + M +H C N N ++ + A +L + S G
Sbjct: 296 GGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM---GSYG---- 348
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
PD +Y+++L+ A +W+ + + M + C ++ + + G
Sbjct: 349 ------CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKG 402
Query: 587 KCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
L+E A + + E G + + ++ VQ + + A+ L +M P IT
Sbjct: 403 ---LIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTIT-- 457
Query: 644 QWTELFE--SNEDRI--SRDKLEKLLNALCNCNAASSEITVS 681
+T L N +R+ + + + ++L C N + + VS
Sbjct: 458 -YTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVS 498
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 104/534 (19%), Positives = 191/534 (35%), Gaps = 123/534 (23%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD--- 214
IRVL DR A + M + G LL+ + + QAM+VLD
Sbjct: 150 IRVLCDR----GRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMR 205
Query: 215 -------------WVYGL------KDKRDLKSRF----------VYTKLLAILGKAGRPH 245
+ G+ D R+L +R YT LL L + R
Sbjct: 206 AKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWD 265
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+ +F M+E N P+ + + + G+++ ++++E+M + +
Sbjct: 266 DVEELFAEMMEK-NCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIV 324
Query: 306 WDPVLE--------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ + + PD + Y VL + +W + ++ ++
Sbjct: 325 INSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNC 384
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P+ T+ + ++ Q G + +M++ G +G +TY LV F +G I+ A+
Sbjct: 385 PPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALE 444
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIIS 464
R+M + T Y L LCN R A LV E ++ P +TF L+
Sbjct: 445 LFRSMPCKPNTIT---YTTLLTGLCNAERLDGAAELVAEMLRG--DCPPNVVTFNVLVSF 499
Query: 465 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK-------------------------- 497
G +++ I + + M +H C PN+ T N +L
Sbjct: 500 FCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPD 559
Query: 498 ---------VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML---- 544
+ S+ D +A +LF ++P Y+ +L
Sbjct: 560 VITFSSIIGILSKEDRIEEAVQLFHVVQDIG-------------MRPKAVVYNKILLGLC 606
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
+ + ++F Y M +GC +++ + L+ + G LL+ A D L
Sbjct: 607 KRCEIDNAIDFFAY----MVSNGCMPNESTYIILIEGLAHEG---LLKEAQDLL 653
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 118/330 (35%), Gaps = 27/330 (8%)
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R + GEA L+R G+ ++A +R E G Y L C
Sbjct: 65 RSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRY 124
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
G A ++ + P T+T LI D G + D +S+ M + C+PN+ T
Sbjct: 125 GHLDAARRLIGSMP----VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVT 180
Query: 492 VNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSG--------DGA-------- 531
+L+ RN F +A + +E N Y + D A
Sbjct: 181 YTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLP 240
Query: 532 --PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+PD +Y+++L+ + +W+ E ++ M C ++ L+ R G
Sbjct: 241 SYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVE 300
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
+ + E G + ++ Q + A L+N M + +T +
Sbjct: 301 RAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVL 360
Query: 650 ESNEDRISRDKLEKLLNALCNCNAASSEIT 679
+ D ++LLN + N +E+T
Sbjct: 361 KGLCRAERWDDAKELLNEMVRNNCPPNEVT 390
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 118/303 (38%), Gaps = 42/303 (13%)
Query: 149 KRWRSEAEAIRVLV-DRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+RW E + +V + E+T F+ I+ Q GL+ Q + L++ + + G
Sbjct: 367 ERWDDAKELLNEMVRNNCPPNEVTFNT--FICILCQKGLI---EQAIMLIEQMSEHGCTV 421
Query: 208 QAMSVLDWVYGLKDKRDLKS-------------RFVYTKLLAILGKAGRPHEALRIFNLM 254
++ V G + + S YT LL L A R A + M
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEM 481
Query: 255 LE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV---- 309
L DC P++ ++ + Q G L+E ++L+E+M + + D +
Sbjct: 482 LRGDCP--PNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 539
Query: 310 ----------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ PD++ +++++ + + +F ++ G++P A Y
Sbjct: 540 SSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYN 599
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + + + D +FF M +G TY +L+ EG + EA + + R
Sbjct: 600 KILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSR 659
Query: 414 GVV 416
GV+
Sbjct: 660 GVL 662
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 180/454 (39%), Gaps = 49/454 (10%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMN 182
LN +++ +G F +V KR + + + L+ L + K F +
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG 242
G + L+ G+ G R A+ L + G K D+ +Y ++ + K
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDV---VMYNTIIDAMCKYQ 213
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
EA +F+ M + D+ Y+++ VG LKE + L+ M K
Sbjct: 214 LVSEAYGLFSEMAVK-GISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK--------- 263
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
+ P++ YN +++A + K V + K+ +KP TY M+
Sbjct: 264 ------TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMD----- 312
Query: 363 GKYDLVHE------FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
Y LV+E F M+ G TY +L+ F + ++EA+ + M Q+ +V
Sbjct: 313 -GYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCI 475
Y L LC +GR ++++++ +P + IT++ LI GH+D I
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRD--RGQPADVITYSSLIDGLCKNGHLDRAI 429
Query: 476 SIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
++F MKD PNI T +L + A+E+F++ + GY
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL---TKGYHL--------- 477
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+ YTY+ M+ E + M +GC
Sbjct: 478 -NVYTYNVMINGHCKQGLLEEALTMLSKMEDNGC 510
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 152/362 (41%), Gaps = 35/362 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++D + + ++ ++ + M G+ L+ G G ++A+ GL
Sbjct: 205 IIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAI-------GLL 257
Query: 221 DKRDLKS----RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
++ LK+ + Y L+ L K G+ EA + +ML+ C + PD+ Y +
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC-VKPDVITYST------- 309
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL--EPDLVVYNAVLNACVPSHQWKGVF 334
L + L+ ++ K H N ++ PD+ Y ++N +
Sbjct: 310 ---LMDGYFLVYEVK-------KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+FK++ + + P TY ++ + +SG+ V + +M G+ +TY L+
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGL 419
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ G ++ A+A M+ + + + L LC GR +DA V + + L L
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL--LTKGYHL 477
Query: 455 EI-TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ T+ +I G +++ +++ M+D+ C PN T ++ + D KA++L
Sbjct: 478 NVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLL 537
Query: 513 EE 514
+
Sbjct: 538 RQ 539
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 107/271 (39%), Gaps = 15/271 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++PDL+ N ++N Q F V ++ K G P T ++ + G+
Sbjct: 90 IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL 149
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F K+ G + ++Y L+ + G A+ +R ++ R +Y + +
Sbjct: 150 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAM 209
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
C +A + ++ +++ +T+ LI G + + I + M PN
Sbjct: 210 CKYQLVSEAYGLFSEM-AVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPN 268
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T N ++ + +AK + + A +KPD TYS++++
Sbjct: 269 VYTYNILVDALCKEGKVKEAKSVLAVMLK-------------ACVKPDVITYSTLMDGYF 315
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++ + ++V+ M+L G D + L+
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 21/206 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K EAL +F M + N+ P I Y S+ L + G + + LI+ M
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQK-NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400
Query: 291 RQK--PSKRI----------KNMH--------RKNWDPVLEPDLVVYNAVLNACVPSHQW 330
R + P+ I KN H K D + P++ + +L+ +
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
K VF+ L G + TY + + + G + KM +G A T++ +
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVV 416
+ A +++ + ++A +R M RG++
Sbjct: 521 IIALFKKDENDKAEKLLRQMIARGLL 546
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 178/437 (40%), Gaps = 36/437 (8%)
Query: 237 ILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQV----GLLKELVKLIERMR 291
+LG RPH A + +L+ L P +A SV TL + GLL + V+ + R+R
Sbjct: 102 LLGAGHRPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADHGLLDDAVRALARVR 161
Query: 292 Q---KPSKRIKN-------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q P+ R N + R+ +D + P++ +N V++ +
Sbjct: 162 QLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARA 221
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F +++ G P TY ++ + G + V + +M KSG A +TY L+ F
Sbjct: 222 LFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFS 281
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G++ +A + M+++GVV + C G Q+AM + +++ +R P E
Sbjct: 282 KFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMR-VRGMMPNE 340
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+T L+ + G +DD I + M PN+ T M+ + ++A +
Sbjct: 341 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSL 400
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
R +K +E Y++++ + E + M G +LD +
Sbjct: 401 MERGG-------------VKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSL 447
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ L+ + K + + G P+ + +T ++ +AVAL++ +
Sbjct: 448 YGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKIL 507
Query: 635 YAPFHITERQWTELFES 651
+ F + L +
Sbjct: 508 DSGFQPNVVTYCALIDG 524
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 147/382 (38%), Gaps = 58/382 (15%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLK 281
+ + F YT L+ KAGR +A+ + + M+ L P++ Y + L G+V
Sbjct: 337 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ-GLVPNVVTYTVMVDGLCKEGKVAEAD 395
Query: 282 ELVKLIERMRQKP-----------------SKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
++ L+ER K S+R ++ + + +E D+ +Y ++
Sbjct: 396 NVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGL 455
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + ++ GL+P+ Y M+ + ++GK K+ SG
Sbjct: 456 CKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNV 515
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+TY L+ + G I+EA++ M + G+ Y L C G AM ++ +
Sbjct: 516 VTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNE 575
Query: 445 I--KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
+ K + K + +T LI M ++ D ++ M + + ++ + +
Sbjct: 576 MIDKGMSLDK---VVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCN 632
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML----------EASATAH 551
+M +A+ + E G + PD+ Y+ ++ EAS+ +
Sbjct: 633 MNMMQEARGVLSEMI-------------GTGITPDKTVYNCLIRKYQKLGNMEEASSLQN 679
Query: 552 QWEYFEYVYKGMALSGCQLDQT 573
+ E LS C D T
Sbjct: 680 EMES--------VLSSCTEDDT 693
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 114/286 (39%), Gaps = 19/286 (6%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V+VD L + A+ + +M + G+ E L+ G + +A+ +L+ +
Sbjct: 380 VMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ---M 436
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+K +Y L+ L K + EA + + M C L P+ Y ++ L + G
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM-AGCGLRPNTVIYTTIMDALFKAGK 495
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E V L+ ++ D +P++V Y A+++ + F +
Sbjct: 496 ESEAVALLHKI---------------LDSGFQPNVVTYCALIDGLCKAGSISEAISHFNK 540
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+R+ GL P+ Y ++ + G + +M G ++ + Y L+ + ++
Sbjct: 541 MRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQAN 600
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+ +A A M + G+ Y CN Q+A V+ ++
Sbjct: 601 LQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM 646
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 150/349 (42%), Gaps = 31/349 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KA A +F M ++ PD+ Y+ LG+ G +KEL L E M
Sbjct: 791 YNSLIDGLLKARLTEMAWGLFYKM-KNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEM 849
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ K P+ + +N V+ V S+ ++ L P+
Sbjct: 850 LFRGCK---------------PNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPW 894
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYG ++ +L+ G+ + +FF +M G Y +L+ F ++G + A R M
Sbjct: 895 TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ G+ Y + CLC G+ DA+ E++K L P + + +I
Sbjct: 955 VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK-LSGLDPDLVCYNLMINGLGRSQR 1013
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+++ +S+F M++ P++ T NA++ M +A +++EE L G
Sbjct: 1014 VEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQ---------LKG- 1063
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
L+P+ +TY++++ + + + VYK M + GC+ + A L
Sbjct: 1064 ---LEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 181/464 (39%), Gaps = 49/464 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ LG + M +L + L + ++ + +T + ILG+AG+ EA I M
Sbjct: 233 LMVALGKRRDIETVMGLLQEMESLGLRPNI---YTFTICIRILGRAGKIDEAYGILKRM- 288
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR---QKPSKRI------KNMHRKNW 306
+D PD+ Y + L G L +L +M+ KP + K +
Sbjct: 289 DDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDL 348
Query: 307 DPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D + E PD+V + +++A + F ++K G+ P+ TY
Sbjct: 349 DAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTL 408
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ +L+ + D E F M G A TY + + + + G+ +A+ M+ G+
Sbjct: 409 ICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGI 468
Query: 416 V-----GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
V AS+Y L GR ++A +K + P IT+ L+ G
Sbjct: 469 VPNIVACNASLY-----SLAEQGRLEEAKEFFNGLKKCGLA-PDAITYNILMRCYGKAGR 522
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+DD I + M+++ C+P + +N+++ + D +A ++F+
Sbjct: 523 VDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMK---------- 572
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
L P TY+++L + + ++KGM C + LL + G+
Sbjct: 573 ---LAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVD 629
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
L + E P L + ++ I ++ A L + M
Sbjct: 630 LALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 163/383 (42%), Gaps = 45/383 (11%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L + K L +G R+A L+ ++ + + + Y L+ +L K+G EAL+++
Sbjct: 161 LTIFKVLYIRGGLREAPVALE---KMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRR 217
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKEL-----------VKLIERMRQKPS 295
M+ + + P + Y ++ V LG+ +GLL+E+ + R+ +
Sbjct: 218 MVSE-GIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAG 276
Query: 296 K--RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K + ++ D PD+V Y +++A + + +F +++ S KP TY
Sbjct: 277 KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYI 336
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
++ G D + EF+ +M G +T+ +L+ A + GK++EA + M+++
Sbjct: 337 TLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQ 396
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT-FTGLIISSMDG--GH 470
GV Y L C L R +A+ + ++SL LE T +T ++ G G
Sbjct: 397 GVAPNLHTYNTLICGLLRLNRLDEALELFNSMESL----GLETTAYTYILFIDYYGKSGE 452
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
I F+ MK + PNI NA L + +AKE F +
Sbjct: 453 SGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCG---------- 502
Query: 530 GAPLKPDEYTYSSMLEASATAHQ 552
L PD TY+ ++ A +
Sbjct: 503 ---LAPDAITYNILMRCYGKAGR 522
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 167/427 (39%), Gaps = 73/427 (17%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQV 277
+K+ + + Y LLA LGK GR EA +F M+ +DC P+ +++++ L +
Sbjct: 568 MKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCP--PNTISFNTLLDCLCKN 625
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + +K++ RM + PD++ YN V+ + ++ FW+F
Sbjct: 626 GEVDLALKMLFRMTEMNCF---------------PDVLTYNTVIYGLIKENRVNYAFWLF 670
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGK----YDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
Q++K + P T + +++ G+ + + EF + + +
Sbjct: 671 HQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADG-----------S 718
Query: 394 FWE--------EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
FWE E +I +++ ++ + SV L LC +G+ DA V K+
Sbjct: 719 FWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKL 778
Query: 446 -KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRND 503
KS + LE + LI + + +F MK+ C P++ T N L ++
Sbjct: 779 TKSFCITPSLE-AYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSG 837
Query: 504 MFSKAKELFEET-------------------TRANSSG------YTFLSGDGAPLKPDEY 538
+ +L+EE ++NS Y +SGD P +
Sbjct: 838 KIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGD---FSPTPW 894
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
TY +++ + E + ++ M GC + + L+ + G F +
Sbjct: 895 TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954
Query: 599 LEAGEIP 605
++ G P
Sbjct: 955 VKEGIRP 961
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/444 (19%), Positives = 170/444 (38%), Gaps = 53/444 (11%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L + GR EA FN L+ C L PD Y+ + G+ G + + +KL+ M +
Sbjct: 482 LAEQGRLEEAKEFFN-GLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGC-- 538
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+P++V+ N++++ + + + +F+++++ L P+ TY +
Sbjct: 539 -------------DPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLA 585
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+ + G+ F+ M +++ L+ + G+++ A+ + M +
Sbjct: 586 GLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFP 645
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
Y + L R A + ++K + + P +T L+ + G I+D +
Sbjct: 646 DVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIY--PDYVTLCTLLPGVIKDGRIEDAFRV 703
Query: 478 ----FQHMKDHCEPNI--GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT----FLS 527
H+ DH + + + +L A+ L T + S FL
Sbjct: 704 AKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLC 763
Query: 528 GDGAP---------------LKPDEYTYSS----MLEASATAHQWEYFEYVYKGMALSGC 568
G + P Y+S +L+A T W F YK M +GC
Sbjct: 764 KHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLF---YK-MKNAGC 819
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAV 627
D + L ++GK L ++ +L G P+ + ++I +V+SN +KA+
Sbjct: 820 TPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHN-IVIFGLVKSNSLDKAI 878
Query: 628 ALINAMAYAPFHITERQWTELFES 651
L + F T + L +
Sbjct: 879 DLYYDLMSGDFSPTPWTYGPLIDG 902
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/318 (16%), Positives = 124/318 (38%), Gaps = 50/318 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P L YN++++ + + + + +F +++ +G P TY L ++ + +SGK +
Sbjct: 784 ITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELF 843
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ + +M G +T+ +++ + +++A+ +YY+L
Sbjct: 844 DLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAI---------------DLYYDLM--- 885
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+G + P T+ LI + G +++ F+ M D+ C PN
Sbjct: 886 --SGDFS----------------PTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPN 927
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
N ++ + + A ELF + ++PD +YS M++
Sbjct: 928 CPLYNILMNGFGKQGDVETACELFRRMVKEG-------------IRPDLKSYSIMVDCLC 974
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + + ++ + LSG D + ++ R+ + FD + G P
Sbjct: 975 MVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLY 1034
Query: 609 FFTEMLIQAIVQSNYEKA 626
+ +++ + E+A
Sbjct: 1035 TYNALILNLGIAGMVEEA 1052
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 79/196 (40%), Gaps = 16/196 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y L+ GK G A +F M+++ + PD+ +Y + L VG + + + E
Sbjct: 930 LYNILMNGFGKQGDVETACELFRRMVKE-GIRPDLKSYSIMVDCLCMVGKVDDALHYFEE 988
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ L+PDLV YN ++N S + + +F ++R G+ P
Sbjct: 989 LKLSG---------------LDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDL 1033
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + +G + + + ++ G TY L+R G + A A +
Sbjct: 1034 YTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKK 1093
Query: 410 MEQRGVVGTASVYYEL 425
M G + +L
Sbjct: 1094 MMVGGCRPNTGTFAQL 1109
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 19/184 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G +G A + + + DLKS Y+ ++ L G+ +AL F L
Sbjct: 934 LMNGFGKQGDVETACELFRRMVKEGIRPDLKS---YSIMVDCLCMVGKVDDALHYFE-EL 989
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L PD+ Y+ + LG+ ++E + L + MR + + PDL
Sbjct: 990 KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG---------------ITPDLY 1034
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNA++ + + ++++L+ GL+P+ TY + SG D + ++KM
Sbjct: 1035 TYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094
Query: 376 AKSG 379
G
Sbjct: 1095 MVGG 1098
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 151/354 (42%), Gaps = 21/354 (5%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D L + + K K R M G+ L+ GL G R+A+++ D +
Sbjct: 84 LVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQ 143
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K ++ Y L+ + G EA R F+ M+ + + PD+ + ++ L + G
Sbjct: 144 GIKANV---ITYNSLIHASCRFGLWKEATRTFSQMVGE-GILPDVVTFTTLIDHLSKKGK 199
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
++E K+ E M ++ P++V YN++LN HQ +F+
Sbjct: 200 VQEAYKIFELMIKQGEA---------------PNIVTYNSLLNGLCLHHQMDHAVRLFEV 244
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + G+K +Y + SGK + FRKM TY +L++A ++ G+
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
I A NM+ G + Y L LC NG ++A+ V +KS+++ + I ++
Sbjct: 305 IRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI-YS 363
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
LI + + IF + PNI T N M+ + +A+ LF
Sbjct: 364 ILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLF 417
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 156/374 (41%), Gaps = 40/374 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ L K G + L++F M+ + + P++ Y S+ L +VG L+E V L +
Sbjct: 80 FTYGLVIDSLCKDGLAIKGLKMFREMI-NMGICPNVIVYSSLINGLCRVGKLREAVNLFD 138
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + K +++ YN++++A WK F Q+ G+ P
Sbjct: 139 EMVSQGIK---------------ANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ ++ + + GK ++ F M K GEA +TY L+ +++ AV
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +RG+ Y L C +G+ ++AM + K++ P T+T L+ +
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQ-YEELTPSITTYTILLKALYQN 302
Query: 469 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETT----RANSSGY 523
G I +F +M+ + P++ T +L +N +A ++F + + Y
Sbjct: 303 GRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIY 362
Query: 524 TFLSG---------------DGAP---LKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+ L G D P L P+ TY+ M+ + E ++ M
Sbjct: 363 SILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEE 422
Query: 566 SGCQLDQTKHAWLL 579
SGC+ D+ +++
Sbjct: 423 SGCEQDEISFNFII 436
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 134/341 (39%), Gaps = 15/341 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ D+++Y ++NA + Q + + +++ + TYGL ++ + + G
Sbjct: 40 FQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGL 99
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ FR+M G + Y L+ GK+ EAV M +G+ Y L
Sbjct: 100 KMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHAS 159
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PN 488
C G W++A ++ P +TFT LI G + + IF+ M E PN
Sbjct: 160 CRFGLWKEATRTFSQMVG-EGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPN 218
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I T N++L + A LFE +K D +Y++++
Sbjct: 219 IVTYNSLLNGLCLHHQMDHAVRLFEVMVERG-------------IKIDVISYNTLINGYC 265
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
T+ + E +++ M T + LL + G+ + F+++ G+ P
Sbjct: 266 TSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLD 325
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
+T +L E+A+ + ++ + + R ++ L
Sbjct: 326 TYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILI 366
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G +AM++ ++ + S YT LL L + GR A +FN M
Sbjct: 260 LINGYCTSGKTEEAMTLFR---KMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNM- 315
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ C P + Y + L + G ++E + + ++ K P +
Sbjct: 316 QICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK---------------PSIR 360
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+Y+ ++ + +W+ +F ++ GL P+ TY + + + + GK F +M
Sbjct: 361 IYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQM 420
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+SG +++ ++R F +E ++ +A+ ++ M ++
Sbjct: 421 EESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREK 458
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 116/278 (41%), Gaps = 15/278 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P+LV + ++ + +F ++ +SG + YG + + ++ + E
Sbjct: 6 QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
R+M + TY +++ + ++G + + R M G+ VY L LC
Sbjct: 66 LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
G+ ++A+ + +++ S + K IT+ LI +S G + F M + P++
Sbjct: 126 RVGKLREAVNLFDEMVS-QGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDV 184
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++ S+ +A ++FE + + P+ TY+S+L
Sbjct: 185 VTFTTLIDHLSKKGKVQEAYKIFELMIKQGEA-------------PNIVTYNSLLNGLCL 231
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
HQ ++ +++ M G ++D + L+ +GK
Sbjct: 232 HHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGK 269
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 146/365 (40%), Gaps = 42/365 (11%)
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
KSG +P+ T ++ M GK E F KM +SG L Y L+ A + +
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-----PLEI 456
AV R M G Y + LC +G L ++ +K R P I
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDG------LAIKGLKMFREMINMGICPNVI 115
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
++ LI G + + +++F M + N+ T N+++ R ++ +A F +
Sbjct: 116 VYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQ- 174
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+ G+G + PD T++++++ + + + +++ M G + +
Sbjct: 175 ----------MVGEG--ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTY 222
Query: 576 AWLLVEASRAGKC--HLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
LL G C H ++HA F+ ++E G + + ++ E+A+ L
Sbjct: 223 NSLL-----NGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLF 277
Query: 631 NAMAYAPFHITERQWTELFES--NEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALH 688
M Y + +T L ++ RI K +L N + C + S T + L L
Sbjct: 278 RKMQYEELTPSITTYTILLKALYQNGRIRTAK--ELFNNMQICGQSPSLDTYTVL---LD 332
Query: 689 ALCRS 693
LC++
Sbjct: 333 GLCKN 337
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 146/342 (42%), Gaps = 17/342 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD + + +++ ++ + ++ + G +P+ TYG+ + + + G DL
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM + + + ++ + + +++A+ + ME +G+ Y L CLC+
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 432 NGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
GRW DA L+ + I+ + P +TF LI + + G + ++ M K +P+I
Sbjct: 308 YGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N+++ + +D KAK++FE + PD TY+++++
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-------------PDVVTYNTLIKGFCK 412
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + E +++ M+ G D + L+ G C + F ++ G P +
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
++ +L EKA+ + + M + + +T + E
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/422 (19%), Positives = 156/422 (36%), Gaps = 79/422 (18%)
Query: 143 VEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKG 199
V+ E +R + L+ L ++ V M Q G + T G ++ G
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV---VVNG 234
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L +G A+++L+ + K + D+ ++ ++ L K +AL +F M E
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADV---VIFNTIIDSLCKYRHVDDALNLFKEM-ETKG 290
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
+ P++ Y S+ L G + +L+ M +K + P+LV +NA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---------------INPNLVTFNA 335
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++A V ++ ++ + K + P TY + + D + F M
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+TY L++ F + ++ + R M RG+VG
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT-------------------- 435
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 498
+T+T LI G D+ +F+ M D P+I T + +L
Sbjct: 436 ----------------VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ----WE 554
N KA E+F+ ++ +K D Y Y++M+E A + W+
Sbjct: 480 LCNNGKLEKALEVFDYMQKSE-------------IKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 555 YF 556
F
Sbjct: 527 LF 528
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y L+ R +A ++F M+ +DC +PD+ Y++ L+K K
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC--FPDVVTYNT---------LIKGFCK-- 412
Query: 288 ERMRQKPSKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
SKR+++ + R+ L D V Y ++ VFKQ+ G
Sbjct: 413 -------SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ P TY + ++ + +GK + E F M KS + Y ++ + GK+++
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
++ +GV Y + LC+ Q+A +++K+K
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y +L + + +F + KS PS + + + + K+D+V KM
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ G TY +L+ F +I+ A+A + M + G + L C+ R
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT---- 491
DA+ +V+++ + + +P ITFT LI + +++ M + C+PN+ T
Sbjct: 173 DAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 492 VNAMLK 497
VN + K
Sbjct: 232 VNGLCK 237
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 85/193 (44%), Gaps = 22/193 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L G A ++F M+ D + PDI Y + L G L++ +++ + M
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 291 RQKPSK--------RIKNMHR-----KNWDPV-------LEPDLVVYNAVLNACVPSHQW 330
++ K I+ M + WD ++P++V YN +++
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ + + K++++ G P++ TY + L+ G E R+M +S +G + L
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM-RSCRFVGDASTIGL 615
Query: 391 VRAFWEEGKINEA 403
V +G+++++
Sbjct: 616 VANMLHDGRLDKS 628
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 177/428 (41%), Gaps = 36/428 (8%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
AL I + ++ NL PD Y +V L G ++E V L+ H
Sbjct: 180 ALGILHDVIPAWNLVPDKFTYSTVVSALADAGCVEEAVALV--------------HEMVV 225
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D V+ + +N VL A + + G +F+ ++ G +A TY + + +L G+
Sbjct: 226 DGVVSAE--AFNPVLKAMLRAGDVNGAVKLFRFMQLKGCTLTAVTYNVLLHGLLLCGEAR 283
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
R+M G G +TY +V + G++ +A + M +G+ + V+ +
Sbjct: 284 AAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVI 343
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
C +G A++V E + + R KP + ++ +I G + + +F+ M D C
Sbjct: 344 TGFCKSGEVDRALMVWETMVAAR-VKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKC 402
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PNI T ++M++ Y S+A +EE + P +YS ++
Sbjct: 403 IPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCV-------------PTAISYSILIS 449
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+ + V+K M GC D + ++ +G F+ +L G+
Sbjct: 450 GLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAK 509
Query: 606 HPLFFTEMLIQAIVQSN-YEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKL 661
+ +L+ A++++N +A+ L+N M P IT + F E + R+ L
Sbjct: 510 PDVISYNVLLDALIRTNDLPRAMDLLNQMLDQMCDPDTITCNIFLREFGVLEGK-GREFL 568
Query: 662 EKLLNALC 669
E L+ LC
Sbjct: 569 EGLVMRLC 576
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 122/286 (42%), Gaps = 19/286 (6%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL L G A+ I M E+ + P + Y +V L + G +++ K+ + M
Sbjct: 269 YNVLLHGLLLCGEARAAMNIMRRM-ENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEM 327
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L P V++AV+ S + V++ + + +KP+
Sbjct: 328 GGQG---------------LAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVV 372
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y ++ +SG+ + F +M + +TY +VR ++ + A++ M
Sbjct: 373 LYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEM 432
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ G V TA Y L LC+ GR +DAM+V + + R P I +T ++ G
Sbjct: 433 IKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIG-RGCAPDTIAYTSMMKGLCMSGM 491
Query: 471 IDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+D + +F M K +P++ + N +L R + +A +L +
Sbjct: 492 VDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQ 537
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 172/426 (40%), Gaps = 66/426 (15%)
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
P +AL + N M+E + PD+ Y ++ + G K V++ E MR + K
Sbjct: 85 PPDALELKNQMVEK-GIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCK------- 136
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
P++ +NA++ ++ + VF+ ++ P T+ + V Q+G
Sbjct: 137 --------PNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNG 188
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
V F++M ++G T+ L+ ++ G ++A+A + M + GV S Y
Sbjct: 189 MDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYN 248
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-- 481
+ L G W+ + V+ ++K R KP E+T+ L+ + +G I+ ++ + +
Sbjct: 249 AVLAALARGGLWKQSEKVLAEMKDGR-CKPNELTYCSLLHAYANGKEIERMCALAEEIYS 307
Query: 482 ----------------KDHCE------------------PNIGTVNAMLKVYSRNDMFSK 507
C+ P+I T+NAM+ +Y R M +K
Sbjct: 308 GIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAK 367
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A E+ + R G+T P TY+S++ + + +E E + + + G
Sbjct: 368 ANEILDCMKRG---GFT----------PSLTTYNSLMYMYSRSANFERSEEILREILAKG 414
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
+ D + ++ R G+ + E+G P + + + S + +A+
Sbjct: 415 IRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAI 474
Query: 628 ALINAM 633
++ M
Sbjct: 475 DVVCYM 480
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 395 WEEGKIN--EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
W G+++ +A+ M ++G+ Y L G+ + A+ + E++++ K
Sbjct: 78 WSHGRLSPPDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRN-EGCK 136
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P TF LI + G + + +F+ +K C P+I T N +L V+ +N M S+ +
Sbjct: 137 PNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGV 196
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F+E RA G+ P+ T+++++ + + ++ VYK M +G D
Sbjct: 197 FKEMKRA---GFV----------PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPD 243
Query: 572 QTKHAWLLVEASRAG 586
+ + +L +R G
Sbjct: 244 LSSYNAVLAALARGG 258
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 17/225 (7%)
Query: 225 LKSRFVYTKLLAILG-KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
++ R V K L ++ K E R F L L PDI +++ G+ ++ +
Sbjct: 310 IEPRAVLLKTLVLVNSKCDLLMETERAF-LELRQRGFSPDITTLNAMVSIYGRRQMVAKA 368
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
++++ M++ P L YN+++ S ++ + +++
Sbjct: 369 NEILDCMKRGG---------------FTPSLTTYNSLMYMYSRSANFERSEEILREILAK 413
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G++P +Y + ++G+ +M +SG A +TY + ++ + EA
Sbjct: 414 GIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEA 473
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ V M + G S Y + C R +A + V ++ L
Sbjct: 474 IDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKL 518
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 166/375 (44%), Gaps = 26/375 (6%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ L ++ T K + +R+M Q ++ G A S+L+ +K
Sbjct: 184 VMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNE---MK 240
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K F Y+ L+ L K + E +R L + N+YP++ ++SV L + G +
Sbjct: 241 QKSIPPDIFTYSTLIDALCKLSQ-WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299
Query: 281 KELVKLIERMRQK---PSKRIKNM-------------HRKNWDPVL----EPDLVVYNAV 320
++ +++ M +K P NM R+ +D ++ EPD++ YN +
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+N + V +++ + GLKPS T + + + + G+ FF +M +G
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
T+ L+ +++ G + EA++ +E+R +Y + LC NG+ A
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
EK+ L P IT+T +I G +D+ + + M+D+ C + T N +++ +
Sbjct: 480 TFEKL-PLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538
Query: 500 SRNDMFSKAKELFEE 514
R++ S+ K EE
Sbjct: 539 LRSNKVSEMKAFLEE 553
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 146/346 (42%), Gaps = 27/346 (7%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMEVM 359
+H K P E V + ++ ++ K +FK+L R++ +P+ YG M +
Sbjct: 132 IHFKKGIPYNE---VTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGL 188
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ G + R M + TY +++ AF ++G ++ A + + M+Q+ +
Sbjct: 189 CKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDI 248
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y L LC +W++ + ++ L + P TF +I G ++D I +
Sbjct: 249 FTYSTLIDALCKLSQWENVRTLFLEMIHL-NIYPNVCTFNSVIDGLCKEGKVEDAEEIMR 307
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
+M + +P++ T N ++ Y +A+E+F+ + N S ++PD
Sbjct: 308 YMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFD--SMINKS-----------IEPDII 354
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
+Y+ ++ A + + V + ++ G + LL G+ ++ FD +
Sbjct: 355 SYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEM 414
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
L AG IP ++ + Y K + AM++ FH ER+
Sbjct: 415 LSAGHIP------DLYTHCTLLGGYFKNGLVEEAMSH--FHKLERR 452
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 129/329 (39%), Gaps = 70/329 (21%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F +F+Q+ ++ PS A++ ++ M+ Y V FR++ K ++ V
Sbjct: 57 FSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHK---------LRIPVHE 107
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
F +N +CCL + ++L + K + ++
Sbjct: 108 FILSIVVN------------------------SCCLMHRTDLGFSVLAIHFKKGIPYN-- 141
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPN---IGTV-NAMLKVYSRNDMFSK 507
E+TFT LI + D + +F+ + ++ CEPN GTV N + K F
Sbjct: 142 -EVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDL 200
Query: 508 AKELFEETTRANSSGYTFLSG--------DGAP----------LKPDEYTYSSMLEASAT 549
+ + + +T+ N+ YT + DGA + PD +TYS++++A
Sbjct: 201 LRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCK 260
Query: 550 AHQWE-----YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
QWE + E ++ + + C + + GK E ++E G
Sbjct: 261 LSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL-----CKEGKVEDAEEIMRYMIEKGVD 315
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAM 633
P + + ++ ++ ++A + ++M
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSM 344
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 190/469 (40%), Gaps = 52/469 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+KD D S Y+ L+ L GR EA+ + M++ + P + Y V+L G
Sbjct: 264 VKDGCDPNS-VTYSTLINGLCSEGRLEEAMDMLEEMVQK-GIEPTVYTYTIPLVSLCDAG 321
Query: 279 LLKELVKLIERMR--------QKPSKRIKNMHR------------KNWDPVLEPDLVVYN 318
E V+L+ +M+ Q + I + R K L P V YN
Sbjct: 322 CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYN 381
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
A++N +++ F +FK + G PS TY ++ G F KM K+
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G + +TY L+ + ++G +N A+ + M+ G+ A Y EL G+ + A
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHA 501
Query: 439 MLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAML 496
+ + + H P +T+T +I + +DD +++F M + P+ T N M+
Sbjct: 502 TSLFYGM--MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559
Query: 497 KVYSRNDMFSKAK----ELFEETTRANSSGYT-FLSG------DGAPLK----------- 534
+S+ + S+A+ ++ ++ N YT F+ G G K
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF 619
Query: 535 PDEYTYSSMLEA---SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
P+ YTYSS++ A E + + + + GC+ + + L+ G+C+
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLAR-LTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 640
+ S+ + G P + +LI E A+ + +M F +
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 151/380 (39%), Gaps = 31/380 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S + ++ IL K GR EA I + + + YP+ Y S+ + + L +
Sbjct: 201 SLLTFNTMINILCKKGRVQEAKLIMSHIFRY-DAYPNAFTYTSLILGHCRNHNLDLAFAM 259
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+RM + +P+ V Y+ ++N + + + +++ + G++
Sbjct: 260 FDRMVKDGC---------------DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIE 304
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY + + + +G E KM K G T+ L+ +GK A+
Sbjct: 305 PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGL 364
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M G+V T Y L LC GR++ A + + + S S P T+ +I
Sbjct: 365 YHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS-HGSLPSTQTYNEIIKCFC 423
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G I + IF M K PN+ T N ++ Y + + A L E
Sbjct: 424 LMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE-----------I 472
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+ G+G LKPD +TY+ ++ + + E+ ++ GM G + + ++
Sbjct: 473 MKGNG--LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNL 530
Query: 586 GKCHLLEHAFDSLLEAGEIP 605
K F ++E+G +P
Sbjct: 531 AKVDDALALFWKMVESGNLP 550
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 124/299 (41%), Gaps = 15/299 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
++ ++ SG++PS T+ + ++ + G+ + + A TY L+
Sbjct: 189 MYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHC 248
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
++ A A M + G + Y L LC+ GR ++AM ++E++ + +P
Sbjct: 249 RNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQ-KGIEPTV 307
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+T ++S D G + + + MK C PNI T A++ SR+ F A L+ +
Sbjct: 308 YTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHK 367
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ DG L P TY++++ ++E ++K M G
Sbjct: 368 -----------MLADG--LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ ++ G FD +L+AG P+ + + ++ Q N A+ L+ M
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 135/354 (38%), Gaps = 63/354 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G+ AM +L+ + G K D + YT+L++ + G+ A +F M+
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPD---AWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV--- 309
E + P+ Y ++ + + + + L +M + PS + N+ +
Sbjct: 510 EH-GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
L P+++ Y + ++ + + F +F ++ K P+ TY
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 356 MEVMLQSGKYD--LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + Q G+ + ++ ++ G TY LV+ EG+ EA V +M+++
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKK 688
Query: 414 GV-----------VGTA------------------------SVYYELACCLCNNGRWQDA 438
G+ +G S Y L C LC ++A
Sbjct: 689 GLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEA 748
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 491
+ + + +H E+ +T L+ + G D C+ + M+ +C N T
Sbjct: 749 QCIFQTMLE-KHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQT 801
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 193/466 (41%), Gaps = 56/466 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y L+ L + R +EA+++ + L C PD+ ++ V L + G + E KL +
Sbjct: 237 IYQMLIHALSENNRVNEAMKLLEEMFLMGCE--PDVQTFNDVIHGLCKAGRIHEAAKLHD 294
Query: 289 RMRQK---PSKRIKN--MH-----------RKNWDPVLEPDLVVYNAVLNACVPSHQWK- 331
RM + I+ MH R + P+ V+YN ++N V S +++
Sbjct: 295 RMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEE 354
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
++K + +G +P A T+ + ++ + + G EF +M K G +TY +L+
Sbjct: 355 AKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILI 414
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
F ++G EA V +M +G+ Y L LC +G+ QDA+ + ++ S +
Sbjct: 415 DGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSS-KGC 473
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
KP TF LI +++ + +++ M + N T N ++ + R ++ +A +
Sbjct: 474 KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM------- 563
L E + G PL D TY+ +++A E + + M
Sbjct: 534 LVGE-----------MRFRGCPL--DNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
+++ C + L+ R GK + +++ G P + + ++ +
Sbjct: 581 SINSCNI-------LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRF 633
Query: 624 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 669
++A+ L N + H + L ISR E L N C
Sbjct: 634 QEALNLFNGLQAKGIHPDAVTYNTL-------ISRYCYEGLFNDAC 672
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/453 (18%), Positives = 172/453 (37%), Gaps = 79/453 (17%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSK-------RIKNMHRKNWDP---------- 308
Y+ + LG VG K + KL+++M+ + I + K P
Sbjct: 96 VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDM 155
Query: 309 ----VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
EP YN VL V + K VF + G+ P+ T+G+ M+ +
Sbjct: 156 WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNE 215
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
D R M K G ++ Y++L+ A E ++NEA+ + M G + +
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKD 483
+ LC GR +A + +++ L + G ++ + G +D+ ++ + +
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRM--LLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN 333
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
PN N ++ Y + F +AK+L + A +PD +T++ M
Sbjct: 334 ---PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI------------AGFEPDAFTFNIM 378
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
++ KG +S + D +++ G
Sbjct: 379 IDGLCK-----------KGYLVSALEF------------------------LDEMVKKGF 403
Query: 604 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRD-KLE 662
P+ + +T ++ Q ++E+A ++N+M+ + + L + + +D K++
Sbjct: 404 EPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGA----LCKDGKIQ 459
Query: 663 KLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
L ++ + + + ++ LC+++K
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 142/350 (40%), Gaps = 30/350 (8%)
Query: 120 FEKD---LNWVLDDDVQLGSDYFAKNVEWHPE---KRWRSEAEAIRVLVDRLSEREMTAK 173
FE D N ++D + G Y +E+ E K + +L+D ++ +
Sbjct: 368 FEPDAFTFNIMIDGLCKKG--YLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 174 NWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-FVYT 232
K V M+ GL L+ L G + A+ + YG + K + +
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQM----YGEMSSKGCKPDIYTFN 481
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
L+ L K + EAL ++ ML + + + Y+++ ++ L+++ KL+ MR
Sbjct: 482 SLIYGLCKNDKMEEALGLYRDMLLE-GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF 540
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ P+ D + YN ++ A + + + +Q+ + PS +
Sbjct: 541 RGC------------PL---DNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSC 585
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ + ++GK + +F R M + G +TY L+ + G+ EA+ ++
Sbjct: 586 NILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQA 645
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
+G+ A Y L C G + DA ++ K S P EIT++ LI
Sbjct: 646 KGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVS-NGFIPNEITWSILI 694
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/440 (17%), Positives = 161/440 (36%), Gaps = 38/440 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ LG+ G ++ +L +KD+ + ++ ++ GKAG P +A R L+L
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQ---MKDEGCVFKESLFILIMRYYGKAGLPGQATR---LLL 153
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ +Y + S V L E++ + P+ + R + P +
Sbjct: 154 DMWGVYCFEPTFKSYNVVL-------EILVAGNCPKVAPNVFYDMLSRG-----ISPTVY 201
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+ V+ A ++ + + + K G P++ Y + + + ++ + + + +M
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G T+ ++ + G+I+EA M R A + L LC G+
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKV 321
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF--QHMKDHCEPNIGTVN 493
+A ++ KI + P + + LI + G ++ + + EP+ T N
Sbjct: 322 DEARAMLSKIPN-----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFN 376
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
M+ + A E +E + +P+ TY+ +++ +
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKG-------------FEPNVITYTILIDGFCKQGHF 423
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
E V M+ G L+ + L+ + GK + + G P F +
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483
Query: 614 LIQAIVQSNYEKAVALINAM 633
+ E+A+ L M
Sbjct: 484 IYGLCKNDKMEEALGLYRDM 503
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 68/164 (41%), Gaps = 16/164 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L K G + L + M + ++P I + + + + + G + + ++ + M
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGE-EIFPSINSCNILINSFCRTGKVNDALQFLRDM 608
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ L PD+V YN+++N +++ +F L+ G+ P A
Sbjct: 609 IQRG---------------LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAV 653
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
TY + G ++ + K +G +T+ +L+ F
Sbjct: 654 TYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYF 697
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 168/406 (41%), Gaps = 40/406 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G +A+ + D G + + Y L+ KA + EA RI M+
Sbjct: 51 LLHGFCKVGELDEALKIFD---GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 107
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP-----SKRIKNMHR------- 303
+ NL PD+ Y+S+ L + G + E LI P S I + R
Sbjct: 108 SE-NLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSE 166
Query: 304 --KNWDPVL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
K + VL EP++ YN +++ + + F +F L K GL+P A TY + ++
Sbjct: 167 ALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 226
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+ ++G+ + + M + G +++ ++ +E +++EA + ME +G
Sbjct: 227 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 286
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI---ISSMDGGHIDDC 474
A + L C C G+W+ AM +++ R KP +T+ L+ + G I +
Sbjct: 287 NAISFNTLICGQCRAGKWKKAMTTFKEMLK-RGVKPTVVTYNILVDGLCKARQEGRIKEA 345
Query: 475 ISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
I++F M + P++ T +A++ + A+ L +
Sbjct: 346 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM-------------EAKGC 392
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
P+ YTY+S++ + + ++ M GC D + ++
Sbjct: 393 IPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 168/417 (40%), Gaps = 46/417 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ + YNA+L+ + +++++ K+G P TY + + G+ D +
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F K G +TY L+ F + K++EA ++ M +V Y L LC
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 432 NGRWQDA-MLVVEKIKSLRHSKPLEITFTGLI---ISSMDGGHIDDCISIFQH-MKDHCE 486
NGR +A ML+V+K S P IT++ LI + G + + + +F +K E
Sbjct: 128 NGRVDEARMLIVDKGFS-----PNVITYSTLISGLCRELRG--VSEALKLFGSVLKQGYE 180
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYT-FLSG------------- 528
P + T N ++ + D ++A ELF + ++ YT F+ G
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240
Query: 529 ----DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
D PD ++++++ + + E + GM GC + L+ R
Sbjct: 241 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 300
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFF---TEMLIQAIVQSNYEKAVALINAM---AYAPF 638
AGK F +L+ G P + + + L +A + ++A+ L +AM P
Sbjct: 301 AGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPD 360
Query: 639 HITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
+T ++ L + D +LL A+ A V + + LC EK
Sbjct: 361 VVT---YSALIDGLGKAGKLDDARRLLGAM---EAKGCIPNVYTYNSLISGLCGLEK 411
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/454 (19%), Positives = 182/454 (40%), Gaps = 90/454 (19%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+R Y LL+ L GR +A ++ M++ PD+ Y+++ +VG L E +K+
Sbjct: 9 NRITYNALLSGLCNGGRMSDAQALYERMIK-AGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 287 IERMRQKP-----------------------SKRI-KNMHRKNWDPVLEPDLVVYNAVLN 322
+ ++ ++RI + M +N L PD+V YN+++N
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN----LVPDVVTYNSLVN 123
Query: 323 ACVPS------------------------------HQWKGV---FWVFKQLRKSGLKPSA 349
+ + +GV +F + K G +P
Sbjct: 124 GLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEV 183
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + ++ +L+ + + E F + K G A+TY V + + G++ +A+ +++
Sbjct: 184 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 243
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M+++G V + + LC R +A +++ +++ + P I+F LI G
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA-KGCSPNAISFNTLICGQCRAG 302
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE---LFEETTRANSSGYTF 525
++ F+ M K +P + T N ++ + + KE LF+
Sbjct: 303 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV---- 358
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
PD TYS++++ A + + + M GC + + L+ +
Sbjct: 359 ---------PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI-----S 404
Query: 586 GKCHL--LEHA---FDSLLEAGEIPHPLFFTEML 614
G C L ++ A F +++E G +P + + ++
Sbjct: 405 GLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 184/474 (38%), Gaps = 47/474 (9%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
+ D+ T L+ L K G+ +A R+ + LED PD+ Y+ + + G +
Sbjct: 139 RGDIPDIIACTSLIRGLCKTGKTWKATRVMEI-LEDSGAVPDVITYNVLISGYCKTGEIG 197
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
++L++RM + PD+V YN +L S + K V +
Sbjct: 198 SALQLLDRMS------------------VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQM 239
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
+ P TY + +E + + +M G +TY VL+ +EG+++
Sbjct: 240 QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLD 299
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTG 460
EA+ + +M G + + +C+ GRW DA + E I+ + P +TF
Sbjct: 300 EAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR--KGCSPSVVTFNI 357
Query: 461 LIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
LI G I I + + M H C PN + N +L ++ +A E +
Sbjct: 358 LINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417
Query: 520 --------SSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQWEYFE 557
++ T L DG P TY+++++ + + +
Sbjct: 418 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAI 477
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+ M G + D ++ L+ SR GK F L E G P+ + + +++
Sbjct: 478 KLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 537
Query: 618 IVQSNYEKAVALINAMAYAPFHITERQWTELFES-NEDRISRDKLEKLLNALCN 670
+A+ + M TE + L E + ++++ LE LLN LC+
Sbjct: 538 CKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALE-LLNELCS 590
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 162/389 (41%), Gaps = 42/389 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L+ L D G ++AM VLD + D+ YT L+ K +A+++ + M
Sbjct: 218 ILRTLCDSGKLKEAMEVLDRQMQRECYPDV---ITYTILIEATCKESGVGQAMKLLDEM- 273
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D PD+ Y+ + + + G L E ++ + M PS +P+++
Sbjct: 274 RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHM---PSYGC------------QPNVI 318
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N +L + + +W ++ + G PS T+ + + + + G + KM
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM 378
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +L+Y L+ A ++ K+ A+ + M RG Y L LC +G+
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 438
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
A+ ++ ++ S + P+ IT+ +I G DD I + MK +P+I T +
Sbjct: 439 DVAVEILNQLGS-KGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYST 497
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML----EASATA 550
++ SR +A F + +KP+ TY+S++ +A T
Sbjct: 498 LVGGLSREGKVDEAIAFFHDLEEMG-------------VKPNAITYNSIMLGLCKARQTV 544
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++ Y M GC+ +T + L+
Sbjct: 545 RAIDFLAY----MVARGCKPTETSYMILI 569
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 141/344 (40%), Gaps = 41/344 (11%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
EA+ VL DR +RE + ++ + GQ +KLL + DKG ++
Sbjct: 230 EAMEVL-DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVL 288
Query: 216 VYGL--KDKRDLKSRFV--------------YTKLLAILGKAGRPHEALRIFNLML-EDC 258
+ G+ + + D RF+ + +L + GR +A + M+ + C
Sbjct: 289 INGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGC 348
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKN--MHRKNWDPVLE-- 311
+ P + ++ + L + GL+ + ++E+M Q P+ N +H D +E
Sbjct: 349 S--PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERA 406
Query: 312 -------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
PD+V YN +L A + + QL G P TY ++
Sbjct: 407 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDG 466
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ + GK D + +M G +TY LV EGK++EA+A ++E+ GV
Sbjct: 467 LSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPN 526
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A Y + LC + A+ + + + R KP E ++ LI
Sbjct: 527 AITYNSIMLGLCKARQTVRAIDFLAYMVA-RGCKPTETSYMILI 569
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 21/262 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L++ L + + + + M Q G LL L +A+ LD +
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVG 278
D+ + Y LL L K G+ A+ I N L + C+ P + Y++V L +VG
Sbjct: 417 GCYPDIVT---YNTLLTALCKDGKVDVAVEILNQLGSKGCS--PVLITYNTVIDGLSKVG 471
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ +KL++ M+ K L+PD++ Y+ ++ + F
Sbjct: 472 KTDDAIKLLDEMKGKG---------------LKPDIITYSTLVGGLSREGKVDEAIAFFH 516
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
L + G+KP+A TY M + ++ + +F M G +Y +L+ EG
Sbjct: 517 DLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEG 576
Query: 399 KINEAVAAVRNMEQRGVVGTAS 420
EA+ + + RGVV +S
Sbjct: 577 LAKEALELLNELCSRGVVKKSS 598
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 190/469 (40%), Gaps = 52/469 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+KD D S Y+ L+ L GR EA+ + M++ + P + Y V+L G
Sbjct: 264 VKDGCDPNS-VTYSTLINGLCSEGRLEEAMDMLEEMVQK-GIEPTVYTYTIPLVSLCDAG 321
Query: 279 LLKELVKLIERMR--------QKPSKRIKNMHR------------KNWDPVLEPDLVVYN 318
E V+L+ +M+ Q + I + R K L P V YN
Sbjct: 322 CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYN 381
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
A++N +++ F +FK + G PS TY ++ G F KM K+
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G + +TY L+ + ++G +N A+ + M+ G+ A Y EL G+ + A
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHA 501
Query: 439 MLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAML 496
+ + + H P +T+T +I + +DD +++F M + P+ T N M+
Sbjct: 502 TSLFYGM--MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559
Query: 497 KVYSRNDMFSKAK----ELFEETTRANSSGYT-FLSG------DGAPLK----------- 534
+S+ + S+A+ ++ ++ N YT F+ G G K
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF 619
Query: 535 PDEYTYSSMLEA---SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
P+ YTYSS++ A E + + + + GC+ + + L+ G+C+
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLAR-LTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 640
+ S+ + G P + +LI E A+ + +M F +
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 151/380 (39%), Gaps = 31/380 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S + ++ IL K GR EA I + + + YP+ Y S+ + + L +
Sbjct: 201 SLLTFNTMINILCKKGRVQEAKLIMSHIFRY-DAYPNAFTYTSLILGHCRNHNLDLAFAM 259
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+RM + +P+ V Y+ ++N + + + +++ + G++
Sbjct: 260 FDRMVKDGC---------------DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIE 304
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY + + + +G E KM K G T+ L+ +GK A+
Sbjct: 305 PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGL 364
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M G+V T Y L LC GR++ A + + + S S P T+ +I
Sbjct: 365 YHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS-HGSLPSTQTYNEIIKCFC 423
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G I + IF M K PN+ T N ++ Y + + A L E
Sbjct: 424 LMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE-----------I 472
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+ G+G LKPD +TY+ ++ + + E+ ++ GM G + + ++
Sbjct: 473 MKGNG--LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNL 530
Query: 586 GKCHLLEHAFDSLLEAGEIP 605
K F ++E+G +P
Sbjct: 531 AKVDDALALFWKMVESGNLP 550
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 124/299 (41%), Gaps = 15/299 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
++ ++ SG++PS T+ + ++ + G+ + + A TY L+
Sbjct: 189 MYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHC 248
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
++ A A M + G + Y L LC+ GR ++AM ++E++ + +P
Sbjct: 249 RNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQ-KGIEPTV 307
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+T ++S D G + + + MK C PNI T A++ SR+ F A L+ +
Sbjct: 308 YTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHK 367
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ DG L P TY++++ ++E ++K M G
Sbjct: 368 -----------MLADG--LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ ++ G FD +L+AG P+ + + ++ Q N A+ L+ M
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 135/354 (38%), Gaps = 63/354 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G+ AM +L+ + G K D + YT+L++ + G+ A +F M+
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPD---AWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV--- 309
E + P+ Y ++ + + + + L +M + PS + N+ +
Sbjct: 510 EH-GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
L P+++ Y + ++ + + F +F ++ K P+ TY
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 356 MEVMLQSGKYD--LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + Q G+ + ++ ++ G TY LV+ EG+ EA V +M+++
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKK 688
Query: 414 GV-----------VGTA------------------------SVYYELACCLCNNGRWQDA 438
G+ +G S Y L C LC ++A
Sbjct: 689 GLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEA 748
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 491
+ + + +H E+ +T L+ + G D C+ + M+ +C N T
Sbjct: 749 QCIFQTMLE-KHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQT 801
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 146/342 (42%), Gaps = 17/342 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD + + +++ ++ + ++ + G +P+ TYG+ + + + G DL
Sbjct: 150 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 209
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM + + + ++ + + +++A+ + ME +G+ Y L CLC+
Sbjct: 210 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 269
Query: 432 NGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
GRW DA L+ + I+ + P +TF LI + + G + ++ M K +P+I
Sbjct: 270 YGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N+++ + +D KAK++FE + PD TY+++++
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-------------PDVVTYNTLIKGFCK 374
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + E +++ M+ G D + L+ G C + F ++ G P +
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 434
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
++ +L EKA+ + + M + + +T + E
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 476
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/422 (19%), Positives = 156/422 (36%), Gaps = 79/422 (18%)
Query: 143 VEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKG 199
V+ E +R + L+ L ++ V M Q G + T G ++ G
Sbjct: 140 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV---VVNG 196
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L +G A+++L+ + K + D+ ++ ++ L K +AL +F M E
Sbjct: 197 LCKRGDTDLALNLLNKMEAAKIEADV---VIFNTIIDSLCKYRHVDDALNLFKEM-ETKG 252
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
+ P++ Y S+ L G + +L+ M +K + P+LV +NA
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---------------INPNLVTFNA 297
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++A V ++ ++ + K + P TY + + D + F M
Sbjct: 298 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 357
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+TY L++ F + ++ + R M RG+VG
Sbjct: 358 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT-------------------- 397
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 498
+T+T LI G D+ +F+ M D P+I T + +L
Sbjct: 398 ----------------VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 441
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ----WE 554
N KA E+F+ ++ +K D Y Y++M+E A + W+
Sbjct: 442 LCNNGKLEKALEVFDYMQKSE-------------IKLDIYIYTTMIEGMCKAGKVDDGWD 488
Query: 555 YF 556
F
Sbjct: 489 LF 490
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y L+ R +A ++F M+ +DC +PD+ Y++ L+K K
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC--FPDVVTYNT---------LIKGFCK-- 374
Query: 288 ERMRQKPSKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
SKR+++ + R+ L D V Y ++ VFKQ+ G
Sbjct: 375 -------SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 427
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ P TY + ++ + +GK + E F M KS + Y ++ + GK+++
Sbjct: 428 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 487
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
++ +GV Y + LC+ Q+A +++K+K
Sbjct: 488 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y +L + + +F + KS PS + + + + K+D+V KM
Sbjct: 15 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ G TY +L+ F +I+ A+A + M + G + L C+ R
Sbjct: 75 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT---- 491
DA+ +V+++ + + +P ITFT LI + +++ M + C+PN+ T
Sbjct: 135 DAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 193
Query: 492 VNAMLK 497
VN + K
Sbjct: 194 VNGLCK 199
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 85/193 (44%), Gaps = 22/193 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L G A ++F M+ D + PDI Y + L G L++ +++ + M
Sbjct: 400 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458
Query: 291 RQKPSK--------RIKNMHR-----KNWDPV-------LEPDLVVYNAVLNACVPSHQW 330
++ K I+ M + WD ++P++V YN +++
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ + + K++++ G P++ TY + L+ G E R+M +S +G + L
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM-RSCRFVGDASTIGL 577
Query: 391 VRAFWEEGKINEA 403
V +G+++++
Sbjct: 578 VANMLHDGRLDKS 590
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 105/512 (20%), Positives = 208/512 (40%), Gaps = 80/512 (15%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKR----DLK 226
T+K +F + G TE +L+ LG R + ++++ ++ + L+
Sbjct: 92 TSKALQFFNWAQEMGYTHTEQSYFSMLEILGRN---RHLNTARNFLFSIEKRSRGIVKLE 148
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+RF + L+ +AG E++++F +M + + P + ++S+ L L
Sbjct: 149 ARF-FNSLMRNFNRAGLFQESIKVFTIM-KSHGVSPSVVTFNSL------------LTIL 194
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLE-----PDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
++R R NM +K +D +L PD +N ++ + F +F L
Sbjct: 195 LKRGRT-------NMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLS 247
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG--ALTYKVLVRAFWEEGK 399
+ G +P TY ++ + ++GK + + + M K + +TY L+R + + +
Sbjct: 248 RFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKRE 307
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
I +A+A M +G+ Y L LC +++ ++E P TF
Sbjct: 308 IEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFN 367
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
L+ G++DD + +F+ M + +P+ T +A+++ + + KA++L ++
Sbjct: 368 TLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLER 427
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
LSGDG KP Y+ + F+Y+ C+ +TK A
Sbjct: 428 K----ILLSGDGC--KPLVAAYNPI------------FKYL--------CETGKTKKA-- 459
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML---IQAIVQSNYEKAVALINAMAY 635
E AF L+ G P + T ++ + +S YE V ++
Sbjct: 460 -------------EKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFX 506
Query: 636 APFHITERQWTELFESNEDRISRDKLEKLLNA 667
F E L ++ ++ LEK+L +
Sbjct: 507 PDFETYESLINGLLHMDKPLLALQSLEKMLRS 538
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 134/332 (40%), Gaps = 17/332 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P+ YN +++ Q + V + G P TY + +E + Y
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E M G +TY VL+ EG +++A+ +RN+ G + Y + L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 430 CNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
C+ RW DA LV E ++ + P E TF +I S G + I + + M H C
Sbjct: 123 CSAERWGDADELVTEMLR--ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
NI T NA++ A L ++ S G KPD TY+++L+
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLL---SKMKSYG----------CKPDIVTYNTLLKGL 227
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+A +W E + M +GC D L+ + G F + + G P+
Sbjct: 228 CSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 287
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 639
+ ++ ++ + ++A+ L N M + F+
Sbjct: 288 ITYSTIISGLAKATKLDQALELFNEMGHKGFN 319
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 132/321 (41%), Gaps = 23/321 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
L+ L ++G R A+SVLD + D+ Y LL K +A+ + +LM
Sbjct: 13 LIHTLCERGQVRDALSVLDDMLCRGCAPDV---VTYNILLEATCKGRGYRQAMELIDLMR 69
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E C P+ Y+ + + G ++ +E +R PS K P
Sbjct: 70 AEGCT--PNNVTYNVLMDGMCGEG---DVDDALELLRNLPSHGCK------------PST 112
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN VL + +W + ++ + P+ AT+ + + + + G + K
Sbjct: 113 VNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEK 172
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M+K G +TY ++ E+ ++ A+ + M+ G Y L LC+ R
Sbjct: 173 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAR 232
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
W DA +++ + P +TF LI G + D I +F+ M D C PN T +
Sbjct: 233 WVDAEELMDNMTQ-NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 291
Query: 494 AMLKVYSRNDMFSKAKELFEE 514
++ ++ +A ELF E
Sbjct: 292 TIISGLAKATKLDQALELFNE 312
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 159/401 (39%), Gaps = 86/401 (21%)
Query: 122 KDLNWVLDDDVQLGS--DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVR 179
+D VLDD + G D N+ + R +A+ L+D + T N +
Sbjct: 24 RDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME-LIDLMRAEGCTPNNVTYNV 82
Query: 180 IMNQSGLMFTEGQM---LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
+M+ M EG + L+LL+ L G ++ Y +L
Sbjct: 83 LMDG---MCGEGDVDDALELLRNLPSHGCKPSTVN-------------------YNTVLK 120
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS- 295
L A R +A + ML + N P+ A ++ V +L + GLL++ ++L+E+M +
Sbjct: 121 GLCSAERWGDADELVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 179
Query: 296 ------KRIKN--MHRKNWDPVL-----------EPDLVVYNAVL--------------- 321
I N ++N D + +PD+V YN +L
Sbjct: 180 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEEL 239
Query: 322 ------NACVPSHQW----------KGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQ 361
N C+P + KG+ VFKQ+ G P++ TY + + +
Sbjct: 240 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 299
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+ K D E F +M G + Y++L ++ I EA+ VR ++ G+ +
Sbjct: 300 ATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVL 358
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
Y + LC NG+ + A+ ++ + S P ++T+ LI
Sbjct: 359 YNAILLGLCRNGKTEFAIDIMAYMVS-SGCMPDDLTYVILI 398
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 20/208 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL W A ++D + L + L+ L + G +A+ +F M
Sbjct: 223 LLKGLCSAARWVDAEELMD---NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM- 278
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P+ Y ++ L + L + ++L M K PD
Sbjct: 279 PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG---------------FNPD-K 322
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+Y + + ++L+ SG+ P Y + + ++GK + + M
Sbjct: 323 IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 382
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEA 403
SG LTY +L+ EG +NEA
Sbjct: 383 VSSGCMPDDLTYVILIEGLAYEGYLNEA 410
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 179/399 (44%), Gaps = 46/399 (11%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D++SR TKL+ L + GRP EA IFN ++E+ + P + Y ++ L + L
Sbjct: 341 DVRSR---TKLMNGLIERGRPQEAHSIFNTLIEEGH-KPSLITYTTLVTALTRQKHFHSL 396
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ LI ++ + L+PD +++NA++NA S +F+++++S
Sbjct: 397 LSLISKVEKNG---------------LKPDTILFNAIINASSESGNLDQAMKIFEKMKES 441
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI--GALTYKVLVRAFWEEGKIN 401
G KP+A+T+ ++ + GK + M + E + T +LV+A+ + KI
Sbjct: 442 GCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRD-EMLQPNDRTCNILVQAWCNQRKIE 500
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFT 459
EA V M+ GV + LA G A ++ I + H+K P T
Sbjct: 501 EAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTCG 558
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY-SRNDM--FSKAKELFEET 515
++ + G +++ + F MK+ PN+ N+++K + + NDM + +L EE
Sbjct: 559 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 618
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+KPD T+S+++ A ++ + E +Y M G D
Sbjct: 619 G----------------VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 662
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ L +RAG+ E + + + G P+ + +T+++
Sbjct: 663 SILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQII 701
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 124/323 (38%), Gaps = 24/323 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ SE + K M +SG T L+KG G G ++ +LD + L+
Sbjct: 418 IINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM--LR 475
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-L 279
D+ + L+ + EA I M + + PD+ ++++A ++G
Sbjct: 476 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM-QSYGVKPDVVTFNTLAKAYARIGST 534
Query: 280 LKELVKLIERM---RQKPSKRIKNMHRKNW-----------------DPVLEPDLVVYNA 319
+I RM + KP+ R + + + P+L V+N+
Sbjct: 535 CTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNS 594
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ + + GV V + + G+KP T+ M G E + M + G
Sbjct: 595 LIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGG 654
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ +L + + G+ +A + M + GV +Y ++ C+ G + AM
Sbjct: 655 IDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAM 714
Query: 440 LVVEKIKSLRHSKPLEITFTGLI 462
V +K+ + P T+ LI
Sbjct: 715 QVYKKMCGIVGLSPNLTTYETLI 737
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 88/198 (44%), Gaps = 22/198 (11%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPS--- 295
G+ EALR F M E ++P++ ++S+ + + + + E+V L+E KP
Sbjct: 568 GKMEEALRFFYRMKE-LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVT 626
Query: 296 --------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
KR + ++ + ++PD+ ++ + + + + + Q+R
Sbjct: 627 FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMR 686
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK-SGEAIGALTYKVLVRAFWEEGKI 400
K G++P+ Y + +G+ + ++KM G + TY+ L+ F E +
Sbjct: 687 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQP 746
Query: 401 NEAVAAVRNMEQRGVVGT 418
+A +++ME + VV T
Sbjct: 747 WKAEELLKDMEGKNVVPT 764
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 195/461 (42%), Gaps = 37/461 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L +G +A+ V+ + G + Y L+A +AG A R+ +LM
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCA---PNAVTYNTLVAAFCRAGELDGAERVVSLMR 214
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ N P++ ++S+ L + G ++ K+ + M ++ L PD+V
Sbjct: 215 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG---------------LAPDVV 259
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+ VF ++ + GL P T+ + ++G + +M
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G + +T+ L+ F ++G +++A+ AV M + G+ + Y L C GR
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A ++ ++++ R KP +T++ +I G++D + Q M K P+ T ++
Sbjct: 380 DLARELIREMEAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+++ + A ELFE + ++PDE+TY+++++ E
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLG-------------VQPDEFTYTTLIDGHCKEGNVE 485
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ M G D ++ L+ S++ + L +P + + + L
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY-DAL 544
Query: 615 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 655
+ ++ ++ VAL+ ++ ++++S DR
Sbjct: 545 MLCCSKAEFKSVVALLKGFCMKGLM---KEADKVYQSMLDR 582
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 162/398 (40%), Gaps = 31/398 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ L GR EA+ + M P+ Y+++ + G L +++
Sbjct: 153 YTYNILVRALCARGRLEEAVGVVGDM-RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVS 211
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR++ + + P+LV +N+++N + + +G VF ++ + GL P
Sbjct: 212 LMREEGNAK--------------PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+Y + + G F +M + G +T+ L+ A + G + +AVA V
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +RG+ + L C G DA+L VE+++ +P + + LI
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC-GIQPSVVCYNALINGYCKL 376
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G +D + + M+ +P++ T + ++ Y + A +L ++ +
Sbjct: 377 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG-------- 428
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ PD TYSS++ + +++ M G Q D+ + L+ + G
Sbjct: 429 -----VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 483
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
D ++ G +P + ++ +LI + +S K
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYS-VLINGLSKSARTK 520
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 15/237 (6%)
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G PS Y A+ + L F M + G A TY +LVRA G++ EA
Sbjct: 113 GYAPSVPAYN-AVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
V V +M G A Y L C G A VV ++ ++KP +TF ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 464 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
G ++ +F M ++ P++ + N +L Y + ++ +F E T+
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG--- 288
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
L PD T++S++ A+ A E + M G ++++ L+
Sbjct: 289 ----------LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M Q GL+ L+ G+ QA+++ V ++++ + +T L+ K
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL---VAQMRERGLRMNEVTFTALIDGFCK 340
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKR 297
G +AL M C + P + Y+++ LG++ L +EL+ R+ +KR
Sbjct: 341 KGFLDDALLAVEEM-RKCGIQPSVVCYNALINGYCKLGRMDLARELI------REMEAKR 393
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+K PD+V Y+ +++ F + +++ K G+ P A TY +
Sbjct: 394 VK------------PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 441
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+ + + + E F M + G TY L+ +EG + +A++ M ++GV+
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 501
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
Y L L + R ++A ++ K L H P+
Sbjct: 502 DVVTYSVLINGLSKSARTKEAHRLLFK---LYHEDPV 535
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 145/401 (36%), Gaps = 101/401 (25%)
Query: 312 PDLVVYNAVL----NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P + YNAVL +A +PS + + + G+ P+ TY + + + G+ +
Sbjct: 116 PSVPAYNAVLLALSDASLPSARR-----FLSSMLRHGVAPNVYTYNILVRALCARGRLEE 170
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE-LA 426
M +G A A+TY LV AF G+++ A V M + G V + +
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230
Query: 427 CCLCNNGRWQDAMLVVE----------------------KIKSLRHS------------K 452
LC GR + A V + K+ L S
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH----------------C----------- 485
P +TFT LI ++ G+++ +++ M++ C
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 486 ---------EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
+P++ NA++ Y + A+EL E + +KPD
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-------------EAKRVKPD 397
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL---LVEASRAG-KCHLLE 592
TYS+++ + + + M G D ++ L L E R C L
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL-- 455
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
F+++L+ G P +T ++ + N EKA++L + M
Sbjct: 456 --FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 80/206 (38%), Gaps = 14/206 (6%)
Query: 448 LRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 505
LRH P T+ L+ + G +++ + + M+ C PN T N ++ + R
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
A+ + ++ KP+ T++SM+ A + E V+ M
Sbjct: 204 DGAERVVSLMREEGNA------------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G D + LL + G H F + + G +P + FT ++ N E+
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 626 AVALINAMAYAPFHITERQWTELFES 651
AVAL+ M + E +T L +
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDG 337
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 36/231 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL ++ A + + + L + D F YT L+ K G +AL + + M+
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPD---EFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD+ Y + L + KE +L+ ++ + DPV PD +
Sbjct: 496 RK-GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHE-------------DPV--PDNI 539
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGL----------------KPSAATYGLAMEVM 359
Y+A++ C ++K V + K GL K + Y + +
Sbjct: 540 KYDALM-LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ G F ++M +SG + + + LVR +EEG + EA A++++
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 114/557 (20%), Positives = 228/557 (40%), Gaps = 43/557 (7%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M + G + LLKGL D+
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRS 174
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + YT ++ K G +A ++ ML D + PD+
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML-DRGILPDVVT 233
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+S+ L + + + ++++ M +KN + PD + YN++L+
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTM-------VKNG--------VMPDCMTYNSILHGYCS 278
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
S Q K K++R G++P TY L M+ + ++G+ + F M K G T
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L++ + +G + E + M + G+ V+ L C G+ AMLV K++
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR 398
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 505
+ P +T+ +I G ++D + F+ M D P N+++ + +
Sbjct: 399 Q-QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+A+EL E T ++S++++ + E +++ M
Sbjct: 458 ERAEELILEMLDRGICLNTIF-------------FNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G + + + L+ AGK ++ G P+ + ++ ++ S E
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 626 AVALINAM---AYAPFHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVS 681
A+ L M +P IT + LF++ +++ ++ + ++I +S
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI-------TESGTQIELS 617
Query: 682 NLSRALHALCRSEKERD 698
+ LH LC+++ D
Sbjct: 618 TYNIILHGLCKNKLTDD 634
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 119/285 (41%), Gaps = 20/285 (7%)
Query: 337 FKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ ++ ++G + P TYG+ + ++G+ DL + K G + A+ + L++
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 394 FWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR--H 450
+ + ++A+ V R M + G + Y L LC+ R Q+A+ ++ + R
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
S P +++T +I G D S + M D P++ T N+++ + KA
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
E+ + + PD TY+S+L ++ Q + K M G +
Sbjct: 252 EVLNTMVKNG-------------VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVE 298
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
D ++ L+ + G+C FDS+ + G P + +L
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 101/520 (19%), Positives = 195/520 (37%), Gaps = 113/520 (21%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M +L G G ++A+ L +
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ + Y+ L+ L K GR EA +IF+ M + L P+I Y ++ G L
Sbjct: 297 VEPDVVT---YSLLMDYLCKNGRCMEARKIFDSMTKR-GLKPEITTYGTLLQGYATKGAL 352
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M + + PD V++ ++ A + VF ++
Sbjct: 353 VEMHGLLDLMVRNG---------------IHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF-----W 395
R+ GL P+A TYG + ++ +SG+ + +F +M G + G + Y L+ W
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 396 E------------------------------EGKINEAVAAVRNMEQRGVVGTASVYYEL 425
E EG++ E+ M + GV Y L
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 484
C G+ +AM ++ + S+ KP +T++ LI ++D + +F+ M+
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSV-GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 485 CEPNIGTVNAMLK-------------VYSR----------------------NDMFSKAK 509
P+I T N +L+ +Y R N + A
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 510 ELFE----------------------ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++F+ + R + + F++ L P+ +TY M E
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
E + ++ M +GC +D +++ E + G+
Sbjct: 697 IGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 185/427 (43%), Gaps = 39/427 (9%)
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT 232
K +F+ ++ SGL ++ ++ GLG+ G +A ++ + ++D Y
Sbjct: 289 KALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFE---EMRDNGLQPRTRAYN 345
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-------LLKEL-- 283
LL KAG +A + + M E + P+ Y + G +LKE+
Sbjct: 346 ALLRGYVKAGLLRDAEFVVSEM-ERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEA 404
Query: 284 ----------VKLIERMRQKPS-KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
+++ R K ++ + R+ D + PD + YN +++ +
Sbjct: 405 SNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDH 464
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
F ++ G++P T+ ++ ++GK+D E F +M + G T+ +++
Sbjct: 465 AMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMIN 524
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
+F ++ + ++ + NM +G++ A Y L +GR+ DA+ ++ +K+ K
Sbjct: 525 SFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKA-AGLK 583
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P + L+ + G D +S F M+D +P++ +N+++ + ++ +A +
Sbjct: 584 PSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVV 643
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+ + LKPD TY+++++A +++ VY+ M LSGC D
Sbjct: 644 LQYMKEND-------------LKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTPD 690
Query: 572 QTKHAWL 578
+ A L
Sbjct: 691 RKARAML 697
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 112/280 (40%), Gaps = 15/280 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F+++R +GL+P Y + +++G +M +SG TY +L+ A+
Sbjct: 328 IFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYG 387
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ A ++ ME V A V+ + + G WQ V+ +++ +P
Sbjct: 388 NAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMED-SGVRPDR 446
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
I + LI + +D ++ F M + EP+ T N ++ + + +A+ELFEE
Sbjct: 447 IFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEE 506
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
GY P T++ M+ + +W+ + + M G +
Sbjct: 507 MME---KGYL----------PCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVT 553
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ L+ ++G+ D + AG P + +L
Sbjct: 554 YTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALL 593
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 87/478 (18%), Positives = 192/478 (40%), Gaps = 34/478 (7%)
Query: 196 LLKGL-GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI---- 250
LLK L S A +V+ W+ K +Y+ L+ LG++ + +EA +
Sbjct: 138 LLKSLCTSSSSIPLAYAVVSWLQ--KHNLCFSYELLYSILIHALGQSEKLYEAFLLSQKQ 195
Query: 251 ------FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK--LIERMRQKPSKRIKNMH 302
+N ++ C DI ++ + + G +LV LI R K ++ ++
Sbjct: 196 NLTPLTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSIL 255
Query: 303 RKNWDPV----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
+K + + LE D+ ++N ++ + ++ SGL AT +
Sbjct: 256 QKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWG 315
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ G+ + F +M +G Y L+R + + G + +A V ME+ GV+
Sbjct: 316 LGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPN 375
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y L N RW+ A +V++++++ + +P F+ ++ S D G +
Sbjct: 376 EQTYSLLIDAYGNAERWESARIVLKEMEA-SNVQPNAYVFSRILASYRDKGEWQKTFQVL 434
Query: 479 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
+ M+D P+ N ++ + + + A F+ R S G ++PD
Sbjct: 435 REMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFD---RMLSEG----------IEPDT 481
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
T++++++ A + + E +++ M G T ++ + +++ +
Sbjct: 482 ITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTN 541
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 655
+ G +P+ + +T ++ ++ A+ ++ M A + + L + R
Sbjct: 542 MRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQR 599
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/440 (20%), Positives = 186/440 (42%), Gaps = 34/440 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L +G +A+ V V ++ + Y L+A +AG A R+ +LM
Sbjct: 158 LVRALCARGRLEEAVGV---VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 214
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ N P++ ++S+ L + G ++ K+ + M ++ L PD+V
Sbjct: 215 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG---------------LAPDVV 259
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+ VF ++ + GL P T+ + ++G + +M
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G + +T+ L+ F ++G +++A+ AV M + G+ + Y L C GR
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A ++ ++++ R KP +T++ +I G++D + Q M K P+ T ++
Sbjct: 380 DLARELIREMEAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+++ + A ELFE + ++PDE+TY+++++ E
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLG-------------VQPDEFTYTTLIDGHCKEGNVE 485
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ M G D ++ L+ S++ + L +P + + + L
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY-DAL 544
Query: 615 IQAIVQSNYEKAVALINAMA 634
+ ++ ++ VAL+
Sbjct: 545 MLCCSKAEFKSVVALLKGFC 564
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 162/398 (40%), Gaps = 31/398 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ L GR EA+ + M P+ Y+++ + G L +++
Sbjct: 153 YTYNILVRALCARGRLEEAVGVVGDM-RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVS 211
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR++ + + P+LV +N+++N + + +G VF ++ + GL P
Sbjct: 212 LMREEGNAK--------------PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+Y + + G F +M + G +T+ L+ A + G + +AVA V
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +RG+ + L C G DA+L VE+++ +P + + LI
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC-GIQPSVVCYNALINGYCKL 376
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G +D + + M+ +P++ T + ++ Y + A +L ++ +
Sbjct: 377 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG-------- 428
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ PD TYSS++ + +++ M G Q D+ + L+ + G
Sbjct: 429 -----VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 483
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
D ++ G +P + ++ +LI + +S K
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYS-VLINGLSKSARTK 520
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 15/212 (7%)
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G PS Y A+ + L F M + G A TY +LVRA G++ EA
Sbjct: 113 GYAPSVPAYN-AVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
V V +M G A Y L C G A VV ++ ++KP +TF ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 464 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
G ++ +F M ++ P++ + N +L Y + ++ +F E T+
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG--- 288
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
L PD T++S++ A+ A E
Sbjct: 289 ----------LVPDVVTFTSLIHATCKAGNLE 310
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M Q GL+ L+ G+ QA+++ V ++++ + +T L+ K
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL---VAQMRERGLRMNEVTFTALIDGFCK 340
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKR 297
G +AL M C + P + Y+++ LG++ L +EL+ R+ +KR
Sbjct: 341 KGFLDDALLAVEEM-RKCGIQPSVVCYNALINGYCKLGRMDLARELI------REMEAKR 393
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+K PD+V Y+ +++ F + +++ K G+ P A TY +
Sbjct: 394 VK------------PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 441
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+ + + + E F M + G TY L+ +EG + +A++ M ++GV+
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 501
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
Y L L + R ++A ++ K L H P+
Sbjct: 502 DVVTYSVLINGLSKSARTKEAHRLLFK---LYHEDPV 535
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 145/401 (36%), Gaps = 101/401 (25%)
Query: 312 PDLVVYNAVL----NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P + YNAVL +A +PS + + + G+ P+ TY + + + G+ +
Sbjct: 116 PSVPAYNAVLLALSDASLPSARR-----FLSSMLRHGVAPNVYTYNILVRALCARGRLEE 170
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE-LA 426
M +G A A+TY LV AF G+++ A V M + G V + +
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230
Query: 427 CCLCNNGRWQDAMLVVE----------------------KIKSLRHS------------K 452
LC GR + A V + K+ L S
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH----------------C----------- 485
P +TFT LI ++ G+++ +++ M++ C
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 486 ---------EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
+P++ NA++ Y + A+EL E + +KPD
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-------------EAKRVKPD 397
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL---LVEASRAG-KCHLLE 592
TYS+++ + + + M G D ++ L L E R C L
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL-- 455
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
F+++L+ G P +T ++ + N EKA++L + M
Sbjct: 456 --FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 80/206 (38%), Gaps = 14/206 (6%)
Query: 448 LRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 505
LRH P T+ L+ + G +++ + + M+ C PN T N ++ + R
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
A+ + ++ KP+ T++SM+ A + E V+ M
Sbjct: 204 DGAERVVSLMREEGNA------------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G D + LL + G H F + + G +P + FT ++ N E+
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 626 AVALINAMAYAPFHITERQWTELFES 651
AVAL+ M + E +T L +
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDG 337
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 36/231 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL ++ A + + + L + D F YT L+ K G +AL + + M+
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPD---EFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD+ Y + L + KE +L+ ++ + DPV PD +
Sbjct: 496 RK-GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHE-------------DPV--PDNI 539
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGL----------------KPSAATYGLAMEVM 359
Y+A++ C ++K V + K GL K + Y + +
Sbjct: 540 KYDALM-LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ G F ++M +SG + + + LVR +EEG + EA A++++
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 161/383 (42%), Gaps = 36/383 (9%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+R + Y ++A L KA +A+ + M++ + PD Y+S+ G
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQP 167
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + +++MR +EPD+V YN++++ + + +F +
Sbjct: 168 KEAIVFLKKMRSDG---------------VEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
K GLKP TYG ++ G +H M ++G + +LV A+ ++ K+
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 272
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITF 458
EA+ M Q+G+ A Y + LC +GR +DAML E++ + LR P I +
Sbjct: 273 EEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR---PDSIVY 329
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
LI S + +F M D C I N+++ + + ++ +LF+
Sbjct: 330 NSLIHSLCIFDKWEKAEELFLEMLDRGICLSTI-FFNSIIDSHCKEGRVIESGKLFDLMV 388
Query: 517 RA------------NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
R + + F++ L P+ +TY M E E + ++ M
Sbjct: 389 RIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 448
Query: 565 LSGCQLDQTKHAWLLVEASRAGK 587
+GC +D +++ E + G+
Sbjct: 449 DNGCTVDSGMLNFIVRELLQRGE 471
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 28/314 (8%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLL 280
+R + F Y LL L R EAL + ++M +D + PD+ +Y +V G
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVIN-----GFF 99
Query: 281 KE--LVKLIERMRQKPSKRIKN------MHRKNWDPVLE-----------PDLVVYNAVL 321
KE L K++++ R P+ N + D +E PD + YN+++
Sbjct: 100 KEGDLDKMLDQ-RISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 158
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S Q K K++R G++P TY M+ + ++G+ + F M K G
Sbjct: 159 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 218
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
TY L++ + +G + E + M + G+ V+ L C + ++AMLV
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 278
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
K++ + P +T+ +I G ++D + F+ M D P+ N+++
Sbjct: 279 FSKMRQ-QGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLC 337
Query: 501 RNDMFSKAKELFEE 514
D + KA+ELF E
Sbjct: 338 IFDKWEKAEELFLE 351
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 120/287 (41%), Gaps = 19/287 (6%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
++R ++ L + + K + + M +SG+M ++ G G +
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 168
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ L + + D+ + Y L+ L K GR EA +IF+ M + L PDI Y
Sbjct: 169 EAIVFLKKMRSDGVEPDVVT---YNSLMDYLCKNGRCTEARKIFDSMTKR-GLKPDITTY 224
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ G L E+ L++ M + + P+ V++ ++ A
Sbjct: 225 GTLLQGYATKGALVEMHGLLDLMVRNG---------------IHPNHYVFSILVCAYAKQ 269
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + VF ++R+ GL P+A TYG ++V+ +SG+ + +F +M G ++ Y
Sbjct: 270 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVY 329
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
L+ + K +A M RG+ + + + C GR
Sbjct: 330 NSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 116/304 (38%), Gaps = 22/304 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+V Y+ V+N ++ + P+ TY + + ++ D E
Sbjct: 86 PDVVSYSTVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 138
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
M KSG +TY +V F G+ EA+ ++ M GV Y L LC
Sbjct: 139 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 198
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
NGR +A + + + R KP T+ L+ G + + + M ++ PN
Sbjct: 199 NGRCTEARKIFDSMTK-RGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 257
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ ++ Y++ + +A +F + + L P+ TY ++++ +
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQG-------------LNPNAVTYGTVIDVLCKS 304
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ E ++ M G + D + L+ K E F +L+ G +FF
Sbjct: 305 GRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFF 364
Query: 611 TEML 614
++
Sbjct: 365 NSII 368
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 92/221 (41%), Gaps = 23/221 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 192 LMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNG 251
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K + EA+ +F+ M + L P+ Y +V L + G
Sbjct: 252 IH-----PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ-GLNPNAVTYGTVIDVLCKSG 305
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+++ + E+M D L PD +VYN+++++ +W+ +F
Sbjct: 306 RVEDAMLYFEQM---------------IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFL 350
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ G+ S + ++ + G+ + F M + G
Sbjct: 351 EMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIG 391
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 172/435 (39%), Gaps = 37/435 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P I Y++V + G K ++L++ M K + D+ YN ++
Sbjct: 226 PTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKG---------------VNADVCTYNMLI 270
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S++ + + + +RK + P+ TY + GK + + +M G +
Sbjct: 271 HDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLS 330
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+T+ L+ EG EA+ ME +G++GT Y L LC N + A
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGF 390
Query: 442 VEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 499
++K R+ + IT+TG+I G +D+ + + M KD +P+I T +A++ +
Sbjct: 391 YMRMK--RNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGF 448
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
R AKE+ R L P+ YS+++ + +
Sbjct: 449 CRVGRLKTAKEIVCRIYRVG-------------LSPNGIIYSTLIYNCCRMGCLKETIRI 495
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
Y+ M L G D L+ +AGK E + G +P+ + F + LI
Sbjct: 496 YEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSF-DCLINGYG 554
Query: 620 QSNYE-KAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEI 678
S KA ++ + M H T + L + EK L +L N AA +
Sbjct: 555 SSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTV 614
Query: 679 TVSNLSRALHALCRS 693
+ L + A+C+S
Sbjct: 615 MCNTL---ITAMCKS 626
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 153/391 (39%), Gaps = 41/391 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLV L + A+ +F+R M G++ L+ G G G +A SV D + +
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKV 572
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ F Y LL L K G A + F L++ D +++ + + G
Sbjct: 573 GHH---PTFFTYGSLLKGLCKGGHLIAAEK-FLKSLQNVPAAVDTVMCNTLITAMCKSGN 628
Query: 280 LKELVKLIERMRQKP--------SKRIKNMHRKNWDPV-------------LEPDLVVYN 318
L + V L M Q+ + I + RK + L P+ V+Y
Sbjct: 629 LDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYT 688
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
++ + QWK F+ +Q+ K GL T ++ + GK + H+ +M
Sbjct: 689 CFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQ 748
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+ TY +L+ + + ++ + R+M G++ Y + +C + +
Sbjct: 749 NQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIG 808
Query: 439 M-----LVVEKIKSLRHSKPLEITFTGLIISSMDGGHID---DCISIFQHMKDHCEPNIG 490
+ + ++ RH TF LI G I+ D +++ + + N
Sbjct: 809 LKILKAFICRGVEVDRH------TFNMLISKCCANGEINWAFDMVNVMTSLGISLDKN-- 860
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
T +A++ V +RN F +++ + E ++ S
Sbjct: 861 TCDAIVSVLNRNHRFQESRMVLHEMSKQGIS 891
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 2/204 (0%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P + NA+L + V S + V+ K++ K + P AT+ + + V+ G +
Sbjct: 154 FNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSS 213
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+KM KSG A +TY ++ + ++G+ A+ + +M +GV Y L L
Sbjct: 214 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDL 273
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C + R L++ ++ R P E+T+ L+ + G + + M PN
Sbjct: 274 CRSNRSAKGYLLLRDMRK-RMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPN 332
Query: 489 IGTVNAMLKVYSRNDMFSKAKELF 512
T NA++ + F +A ++F
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMF 356
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 191/432 (44%), Gaps = 47/432 (10%)
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD--LKSRF 229
+K +F+ ++ SGL ++ ++ LG+ G +A ++ + + RD LK R
Sbjct: 287 SKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFE------EMRDNGLKPRT 340
Query: 230 -VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-------LLK 281
Y LL KAG +A + + M E + P+ Y + G G +LK
Sbjct: 341 RAYNALLRGYVKAGLLKDAEFVVSEM-ERSGVSPNEQTYSFLIDAYGNAGRWESARIVLK 399
Query: 282 EL------------VKLIERMRQKPS-KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
E+ +++ R K ++ + R+ + + PD V YN +++ +
Sbjct: 400 EMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFN 459
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
F ++ G++P T+ ++ ++GK+D E F +M + G + T+
Sbjct: 460 CLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFN 519
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+++ +F ++ + ++ + +M +G+V + Y L +GR+ DA+ ++ +K+
Sbjct: 520 IMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKA- 578
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSK 507
KP + LI + G + +S F+ M+ D +P++ +N+++ + +
Sbjct: 579 AGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGED----- 633
Query: 508 AKELFEETTRANSSGYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
R ++ +T L LKPD TY+++++A +++ VY+ M LS
Sbjct: 634 ---------RRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILS 684
Query: 567 GCQLDQTKHAWL 578
GC D+ A L
Sbjct: 685 GCTPDRKARAML 696
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 158/409 (38%), Gaps = 78/409 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y+ L+ LG++ + +EA L+ + NL P Y+++ + L++ + LI
Sbjct: 169 LLYSILIHALGQSEKLYEAF----LLSQRQNLTP--LTYNALISACARNNDLEKALNLIT 222
Query: 289 RMRQK--PSKR------IKNMHRKN----------WDPV----LEPDLVVYNAVLNACVP 326
RMRQ PS I+++ RKN + + LE D+ + N ++
Sbjct: 223 RMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAK 282
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ ++ SGL AT + + G+ F +M +G
Sbjct: 283 AGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRA 342
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L+R + + G + +A V ME+ GV Y L N GRW+ A +V+++++
Sbjct: 343 YNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEME 402
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 505
+ + +P F+ ++ S D G + + M++ P+ N M+ + + +
Sbjct: 403 A-SNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCL 461
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
A F+ R S G ++PD T++++++
Sbjct: 462 DHAMATFD---RMLSEG----------IEPDTVTWNTLID-------------------- 488
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
C RAGK E F+ ++E G P F M+
Sbjct: 489 --CH-------------CRAGKHDRAEELFEEMMEGGYSPCNTTFNIMI 522
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 176/404 (43%), Gaps = 45/404 (11%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
G R + SR TKL+ IL G+PHEA IF+ ++ED + P + Y ++ L ++
Sbjct: 51 GKNSCRTVHSR---TKLMNILIGKGKPHEANLIFDNLVEDGH-RPTLITYTTLVAALTKL 106
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+ + LI ++ + K PD ++YNA++NA S K +F
Sbjct: 107 KHFESIFLLISKVEENGMK---------------PDSILYNAMINAFSESGNVKEAMKIF 151
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA-IGALTYKVLVRAFWE 396
++++ +G KP+ +T+ ++ +GK + + M+ G TY +LVRA+
Sbjct: 152 QKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCS 211
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG---RWQDAMLVVEKIKSLRHSKP 453
+ I EA + M G+ Y LA G R +D +L ++ K + +
Sbjct: 212 KKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERT 271
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVY---SRNDMFSKAKE 510
I G +G I+ +++ + PN+ N+++K + + D +A
Sbjct: 272 CGIIVNGY---CKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALT 328
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
L EE +KPD T+S+++ A ++A + + ++ MA +G +
Sbjct: 329 LMEEYG----------------VKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEP 372
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
D + L RAG+ E S+ ++G P+ + T ++
Sbjct: 373 DIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTII 416
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 127/322 (39%), Gaps = 59/322 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ + G+ ++AM + +KD + + L+ G AG+P E L++ +LM
Sbjct: 134 MINAFSESGNVKEAMKIFQ---KMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMS 190
Query: 256 ED-----------------CN------------------LYPDIAAYHSVAVTLGQVGLL 280
D C+ + PD+ Y+ +A Q G
Sbjct: 191 LDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGET 250
Query: 281 KELVKLIERMRQK---PSKR----IKNMHRKNWDPV-------------LEPDLVVYNAV 320
LI M+ + P++R I N + K + + + P+LV++N++
Sbjct: 251 LRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSL 310
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+ + GV + + G+KP T+ M +G D E F MAK+G
Sbjct: 311 IKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGI 370
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ +L + + G+ A + + +M + GV + + C+ G+ ++A +
Sbjct: 371 EPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKM 430
Query: 441 VVEKIKSLRHSKPLEITFTGLI 462
V EK+ + S L+ TF LI
Sbjct: 431 VYEKMCEIGISPNLK-TFETLI 451
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 195/461 (42%), Gaps = 37/461 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L +G +A+ V+ + G + Y L+A +AG A R+ +LM
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCA---PNAVTYNTLVAAFCRAGELDGAERVVSLMR 72
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ N P++ ++S+ L + G ++ K+ + M ++ L PD+V
Sbjct: 73 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG---------------LAPDVV 117
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+ VF ++ + GL P T+ + ++G + +M
Sbjct: 118 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G + +T+ L+ F ++G +++A+ AV M + G+ + Y L C GR
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A ++ ++++ R KP +T++ +I G++D + Q M K P+ T ++
Sbjct: 238 DLARELIREMEAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+++ + A ELFE + ++PDE+TY+++++ E
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLG-------------VQPDEFTYTTLIDGHCKEGNVE 343
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ M G D ++ L+ S++ + L +P + + + L
Sbjct: 344 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY-DAL 402
Query: 615 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 655
+ ++ ++ VAL+ ++ ++++S DR
Sbjct: 403 MLCCSKAEFKSVVALLKGFCMKGLM---KEADKVYQSMLDR 440
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 162/398 (40%), Gaps = 31/398 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ L GR EA+ + M P+ Y+++ + G L +++
Sbjct: 11 YTYNILVRALCARGRLEEAVGVVGDM-RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVS 69
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR++ + + P+LV +N+++N + + +G VF ++ + GL P
Sbjct: 70 LMREEGNAK--------------PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 115
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+Y + + G F +M + G +T+ L+ A + G + +AVA V
Sbjct: 116 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 175
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +RG+ + L C G DA+L VE+++ +P + + LI
Sbjct: 176 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC-GIQPSVVCYNALINGYCKL 234
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G +D + + M+ +P++ T + ++ Y + A +L ++ +
Sbjct: 235 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG-------- 286
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ PD TYSS++ + +++ M G Q D+ + L+ + G
Sbjct: 287 -----VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 341
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
D ++ G +P + ++ +LI + +S K
Sbjct: 342 VEKALSLHDEMIRKGVLPDVVTYS-VLINGLSKSARTK 378
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 147/365 (40%), Gaps = 59/365 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD--- 366
+ P++ YN ++ A + + V +R +G P+A TY + ++G+ D
Sbjct: 6 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65
Query: 367 ----LVHE-----------------------------FFRKMAKSGEAIGALTYKVLVRA 393
L+ E F +M + G A ++Y L+
Sbjct: 66 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 125
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ + G ++E++A M QRG+V + L C G + A+ +V +++ R +
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE-RGLRM 184
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
E+TFT LI G +DD + + M K +P++ NA++ Y + A+EL
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
E + +KPD TYS+++ + + + M G D
Sbjct: 245 REM-------------EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA 291
Query: 573 TKHAWL---LVEASRAG-KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
++ L L E R C L F+++L+ G P +T ++ + N EKA++
Sbjct: 292 ITYSSLIRGLCEEKRLNDACEL----FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 347
Query: 629 LINAM 633
L + M
Sbjct: 348 LHDEM 352
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G A TY +LVRA G++ EAV V +M G A Y L C G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
A VV ++ ++KP +TF ++ G ++ +F M ++ P++ + N
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+L Y + ++ +F E T+ L PD T++S++ A+ A
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRG-------------LVPDVVTFTSLIHATCKAGNL 167
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLL 579
E + M G ++++ L+
Sbjct: 168 EQAVALVAQMRERGLRMNEVTFTALI 193
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M Q GL+ L+ G+ QA+++ V ++++ + +T L+ K
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL---VAQMRERGLRMNEVTFTALIDGFCK 198
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKR 297
G +AL M C + P + Y+++ LG++ L +EL+ R+ +KR
Sbjct: 199 KGFLDDALLAVEEM-RKCGIQPSVVCYNALINGYCKLGRMDLARELI------REMEAKR 251
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+K PD+V Y+ +++ F + +++ K G+ P A TY +
Sbjct: 252 VK------------PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 299
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+ + + + E F M + G TY L+ +EG + +A++ M ++GV+
Sbjct: 300 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 359
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
Y L L + R ++A ++ K L H P+
Sbjct: 360 DVVTYSVLINGLSKSARTKEAHRLLFK---LYHEDPV 393
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 80/206 (38%), Gaps = 14/206 (6%)
Query: 448 LRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 505
+RH P T+ L+ + G +++ + + M+ C PN T N ++ + R
Sbjct: 2 VRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 61
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
A+ + ++ KP+ T++SM+ A + E V+ M
Sbjct: 62 DGAERVVSLMREEGNA------------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 109
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G D + LL + G H F + + G +P + FT ++ N E+
Sbjct: 110 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 169
Query: 626 AVALINAMAYAPFHITERQWTELFES 651
AVAL+ M + E +T L +
Sbjct: 170 AVALVAQMRERGLRMNEVTFTALIDG 195
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 36/231 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL ++ A + + + L + D F YT L+ K G +AL + + M+
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLGVQPD---EFTYTTLIDGHCKEGNVEKALSLHDEMI 353
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD+ Y + L + KE +L+ ++ + DPV PD +
Sbjct: 354 RK-GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHE-------------DPV--PDNI 397
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGL----------------KPSAATYGLAMEVM 359
Y+A++ C ++K V + K GL K + Y + +
Sbjct: 398 KYDALM-LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 456
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ G F ++M +SG + + + LVR +EEG + EA A++++
Sbjct: 457 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 507
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/547 (17%), Positives = 223/547 (40%), Gaps = 44/547 (8%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL 186
+D +V + +F +W ++R + ++ L+ L E M + WK ++ M +
Sbjct: 94 IDVEVSVKIQFF----KWAGKRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSC 149
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
++ ++++ LG +A+SV Y +K ++ + Y ++ +L + G +
Sbjct: 150 AMAPAELSEIVRILGKAKMVNRALSVF---YQVKGRKCRPTASTYNSIILMLMQEGHHEK 206
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHR 303
++N M + + +PD Y ++ ++ ++L + M++ +P+ +I
Sbjct: 207 VHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLM 266
Query: 304 KNWDPVLEPD-----------------LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ V + + + Y ++ S + + + +K + K G K
Sbjct: 267 GIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCK 326
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVA 405
P + ++ +S + F +M A +TY ++++ +E + ++EA +
Sbjct: 327 PDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASS 386
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
M++ G+V ++ Y L C R + A+L++E++ + P + LI +
Sbjct: 387 WFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDE-KGFPPCPAAYCSLINTL 445
Query: 466 MDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGYT 524
D +FQ +K++C + V A M+K + + ++A LF E + +
Sbjct: 446 GVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCT--- 502
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
PD Y Y++++ A + + +++ M +GC D H +L +R
Sbjct: 503 ----------PDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLAR 552
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
G F + + P + F +L +E+A L+ M+ F
Sbjct: 553 TGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLIT 612
Query: 645 WTELFES 651
++ + E+
Sbjct: 613 YSSILEA 619
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 166/368 (45%), Gaps = 39/368 (10%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
L V ++ +R L + F YT+L+ LGK+GR +A + ML+D PD+ +++
Sbjct: 279 LGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKD-GCKPDVVLMNNLIN 337
Query: 273 TLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRK-------------NWDPVLEPDLVV 316
LG+ L++ +KL + M+ P+ N K +W ++ D +V
Sbjct: 338 ILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIV 397
Query: 317 -----YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
Y+ +++ +++ + + +++ + G P A Y + + + +YD+ +E
Sbjct: 398 PSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANEL 457
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F+++ ++ A Y V+++ F + G++NEA+ M++ G Y L +
Sbjct: 458 FQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVR 517
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDHC-EPNI 489
R +A + ++ P +I +I++ + G + +F MK+ +P++
Sbjct: 518 AERMDEAFSLFRTMEE-NGCTP-DINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDV 575
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+ N +L SR +F +A +L +E + S G+ + D TYSS+LEA
Sbjct: 576 VSFNTILGCLSRAGLFEEAAKLMQEMS---SKGFQY----------DLITYSSILEAVGK 622
Query: 550 AHQWEYFE 557
+ E
Sbjct: 623 VDDCKMVE 630
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 100/244 (40%), Gaps = 22/244 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 405 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQE---L 461
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ GK GR +EA+ +FN M + PD+ AY+++ + +
Sbjct: 462 KENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEM-KKLGCTPDVYAYNALMTGMVRAER 520
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ E L M + PD+ +N +LN + KG +F +
Sbjct: 521 MDEAFSLFRTMEENGCT---------------PDINSHNIILNGLARTGGPKGALEMFTK 565
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ S +KP ++ + + ++G ++ + ++M+ G +TY ++ A GK
Sbjct: 566 MKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAV---GK 622
Query: 400 INEA 403
+++
Sbjct: 623 VDDC 626
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 102/266 (38%), Gaps = 22/266 (8%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
DP L +++ + ++ + +W G ++ + + TY + + + +
Sbjct: 84 DPRLVREILKIDVEVSVKIQFFKWAG--------KRRNFEHDSTTYMALIRCLDEHRMFG 135
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
V + + M K A+ +VR + +N A++ ++ R TAS Y +
Sbjct: 136 EVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSII 195
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 485
L G + + ++ S H P +T++ LI + D I +F MK++
Sbjct: 196 LMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGL 255
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+P ++ +Y + +A L +E RA T +TY+ ++
Sbjct: 256 QPTAKIYTTLMGIYFKVGKVEEALGLVKE-MRARRCLLTV------------FTYTELIR 302
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLD 571
+ + E YK M GC+ D
Sbjct: 303 GLGKSGRVEDAYMTYKNMLKDGCKPD 328
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 145/342 (42%), Gaps = 17/342 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD + + +++ ++ + ++ + G +P+ TYG+ + + + G DL
Sbjct: 112 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 171
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM + + + ++ + + +++A+ + ME +G+ Y L CLC+
Sbjct: 172 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 231
Query: 432 NGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
GRW DA L+ + I+ + P +TF LI + + G + + M K +P+I
Sbjct: 232 YGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 289
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N+++ + +D KAK++FE + PD TY+++++
Sbjct: 290 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-------------PDLDTYNTLIKGFCK 336
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + E +++ M+ G D + L+ G C + F ++ G P +
Sbjct: 337 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 396
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
++ +L EKA+ + + M + + +T + E
Sbjct: 397 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 438
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y L+ R +A ++F M+ +DC +PD+ Y++ L+K K
Sbjct: 290 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDC--FPDLDTYNT---------LIKGFCK-- 336
Query: 288 ERMRQKPSKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
SKR+++ + R+ L D V Y ++ VFKQ+ G
Sbjct: 337 -------SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 389
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ P TY + ++ + +GK + E F M KS + Y ++ + GK+++
Sbjct: 390 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 449
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
++ +GV Y + LC+ Q+A +++K+K
Sbjct: 450 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L G A ++F M+ D + PDI Y + L G L++ +++ + M
Sbjct: 362 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Query: 291 RQKPSK--------RIKNMHR-----KNWDPV-------LEPDLVVYNAVLNACVPSHQW 330
++ K I+ M + WD ++P++V YN +++
Sbjct: 421 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 480
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ + + K++++ G P + TY + L+ G E R+M +S +G + L
Sbjct: 481 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM-RSCRFVGDASTIGL 539
Query: 391 VRAFWEEGKINEA 403
V +G+++++
Sbjct: 540 VANMLHDGRLDKS 552
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 160/387 (41%), Gaps = 28/387 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F +T L+ R EA+ + N M+E + PD+ Y ++ +L + G + + L
Sbjct: 142 FTFTSLINGFCLGNRIEEAMSMVNQMVE-MGIKPDVVIYTTIIDSLCKNGHVDNALSLFN 200
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M +N+ + PD+V+Y +++N S +W+ + + + K +KP
Sbjct: 201 QM-------------ENYG--IRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPD 245
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ ++ ++ GK E + +M + A TY L+ EG+++EA
Sbjct: 246 VITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY 305
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
ME +G Y L C + +DAM + ++ S + IT+T LI
Sbjct: 306 LMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEM-SQKGLTGNTITYTTLIQGFGLV 364
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G + +F HM PNI T N +L N +KA +FE+ +
Sbjct: 365 GKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREI------- 417
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
DG P P+ TY+ +L + E V+ M + + ++ +AGK
Sbjct: 418 -DGVP--PNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGK 474
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ F SL G P+ + +T M+
Sbjct: 475 VKDALNLFCSLPSKGVKPNVVTYTTMI 501
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 121/293 (41%), Gaps = 18/293 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P ++ + +LN ++ V + K L+ G+ T L M QS + L F
Sbjct: 69 PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSF 128
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G T+ L+ F +I EA++ V M + G+ +Y + LC
Sbjct: 129 LGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCK 188
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNIG 490
NG +A+ + ++++ +P + +T L+ + G D + + MK +P++
Sbjct: 189 NGHVDNALSLFNQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVI 247
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T NA++ + + AKEL+ E + + + P+ +TY+S++
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMS-------------IAPNIFTYTSLINGLCME 294
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
+ + ++ M GC D + L+ + KC +E A E +
Sbjct: 295 GRLDEARQMFYLMETKGCFPDVVAYTSLI---NGFCKCKKVEDAMKIFYEMSQ 344
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 96/233 (41%), Gaps = 7/233 (3%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
EPD+ + +++N ++ + + Q+ + G+KP Y ++ + ++G D
Sbjct: 137 FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNAL 196
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F +M G + Y LV G+ +A +R M +R + + L
Sbjct: 197 SLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAF 256
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
G+ DA + ++ + + P T+T LI G +D+ +F M+ C P+
Sbjct: 257 VKEGKLLDAKELYNEMIQMSIA-PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPD 315
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG-----YTFLSGDGAPLKPD 536
+ +++ + + A ++F E ++ +G T + G G KP+
Sbjct: 316 VVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 16/220 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G AM + Y + K + YT L+ G G+P+ A +F M+
Sbjct: 322 LINGFCKCKKVEDAMKIF---YEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMV 378
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+I Y+ + L G + + + + E +M ++ D V P++
Sbjct: 379 SR-GVPPNIRTYNVLLHCLCYNGKVNKALMIFE-----------DMQKREIDGV-PPNIR 425
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+ + + + VF ++K + TY + ++ M ++GK F +
Sbjct: 426 TYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSL 485
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
G +TY ++ + EG + EA R M++ GV
Sbjct: 486 PSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 178/433 (41%), Gaps = 78/433 (18%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ IL + G+P EA IFN + E+ + P + Y ++ L
Sbjct: 69 RTVRSR---TKLMNILIEKGKPQEAQLIFNSLTEEGH-RPTLITYTTLLAAL-------- 116
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
RQK K I ++ K L+PD V +NA++NA S K +F++++
Sbjct: 117 -------TRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKD 169
Query: 343 SGLKPSAATYGLAMEVMLQSGK-------YDLVHE------------------------- 370
G KP+ +T+ ++ +G DL+ +
Sbjct: 170 RGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRIT 229
Query: 371 ----FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
KMA SG +TY L RA+ + G+ + A + M+ V+ +
Sbjct: 230 EAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIII 289
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI-----ISSMDGGHIDDCISIFQHM 481
C G+ +DA+ + ++++ P + F LI I+ DG +D+ +++ +
Sbjct: 290 NGYCKEGKMKDALRFLYRMRNY-GVHPNLVIFNSLIKGFLDITDTDG--VDEALTLMEEF 346
Query: 482 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
+P++ T + ++ +S + K +E+F++ +A ++PD + +S
Sbjct: 347 --GVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAG-------------IEPDIHAFS 391
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
+ + A + E E + M SG Q + ++ AGK ++ + E
Sbjct: 392 ILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEM 451
Query: 602 GEIPHPLFFTEML 614
G P+ F ++
Sbjct: 452 GICPNLKTFETLI 464
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 126/324 (38%), Gaps = 63/324 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ + G+ ++AM + +KD+ + + L+ G AG P E L++ +LM
Sbjct: 147 MINAFSESGNVKEAMKIF---RKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMS 203
Query: 256 ED-----------------CN------------------LYPDIAAYHSVAVTLGQVGLL 280
++ CN L PD+ Y+++A Q G
Sbjct: 204 QEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGET 263
Query: 281 KELVKLIERM---RQKPSKR------------------IKNMHR-KNWDPVLEPDLVVYN 318
+I M R P++R ++ ++R +N+ + P+LV++N
Sbjct: 264 SRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYG--VHPNLVIFN 321
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+++ + GV + + G+KP T+ M G D E F M K+
Sbjct: 322 SLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKA 381
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G + +L + + G+ +A + + M + GV ++ + C+ G+ + A
Sbjct: 382 GIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYA 441
Query: 439 MLVVEKIKSLRHSKPLEITFTGLI 462
V EK+ + L+ TF LI
Sbjct: 442 SRVYEKMCEMGICPNLK-TFETLI 464
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/173 (17%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
++E+ + PD+ + ++ VGL+ + ++ + M + +EPD
Sbjct: 342 LMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAG---------------IEPD 386
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ ++ + V + + + + + KSG++P+ + + +GK + +
Sbjct: 387 IHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYE 446
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
KM + G T++ L+ + E + +A ++ MEQ+GV S +A
Sbjct: 447 KMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVAPVKSTIQLVA 499
>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 376
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 19/301 (6%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
K +++K + + PD VVYNA+LN + K F +++ + G S +++ + M
Sbjct: 10 KRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRG 68
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ +GK D V + M +SG ++TY +LV F + G I++++ + EQ+G V
Sbjct: 69 LFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLD 128
Query: 419 ASVYYELACCLCNNGRWQDAMLVV-EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
A Y + LC A+ V+ + IKS KP + LI + +D I +
Sbjct: 129 AFAYSAMINGLCKEANLDRALSVLNDMIKS--GCKPNVHVYNTLINGLVGASKFEDAIRV 186
Query: 478 FQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
F+ M HC P I T N ++ +N+MF +A L +E L P
Sbjct: 187 FREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LDPG 233
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAF 595
TYS +++ H+ E ++ + G + D H L+ GK L L F
Sbjct: 234 VITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYF 293
Query: 596 D 596
D
Sbjct: 294 D 294
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/303 (18%), Positives = 127/303 (41%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K+ ++ Y L+ K G ++L + M
Sbjct: 65 MMRGLFDNGKVDEVISIWEL---MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L + ++ M + K P++
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCK---------------PNVH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N V + +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + ++ A+ + +G ++ L LC+ G+
Sbjct: 226 LDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
Q A+ + + + P ++ L+ G I + + I+ +++ EP+I + N
Sbjct: 286 QLALSLYFDMNHWK-CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNI 344
Query: 495 MLK 497
LK
Sbjct: 345 TLK 347
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 166/426 (38%), Gaps = 81/426 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++ L G+ A++ D L D DL + F + L+A L KA R EA+ M
Sbjct: 226 VIRQLCASGNLEDALAYFDE---LDDSLDL-THFTFNPLVAALCKAERTEEAIAFVKKMS 281
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKE-LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E +P + Y S+ ++G L E L++L E + + PD
Sbjct: 282 ER-RCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERG----------------FIPDA 324
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V Y ++++ + + F ++R G +P A TY ++ +++ H +R+
Sbjct: 325 VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 384
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M +SG + +TY +++ + G++ EA A ME+RG V T
Sbjct: 385 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATV--------------- 429
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
+T++ L+ G++ + +F+ M D CEPN+ + N
Sbjct: 430 ---------------------VTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYN 468
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-----SA 548
+++ R +KA FE+ + L PD YT++S L
Sbjct: 469 IIIRGLCRAGKLAKAYFYFEKLLQRR-------------LCPDVYTFNSFLHGLCQRLDT 515
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
E FE M G + ++ L+ RAG + F ++ G P +
Sbjct: 516 VGDGVELFE----SMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVV 571
Query: 609 FFTEML 614
F ++
Sbjct: 572 VFNTLI 577
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 149/391 (38%), Gaps = 68/391 (17%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+V + ++R + F YT L+ K GR EAL +E PD Y S+ L
Sbjct: 276 FVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVER-GFIPDAVTYTSIIDGL 334
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
++G ++E +R M + + EPD V Y A+++ + +
Sbjct: 335 CKLGRVEE-----------GCERFHEMRNRGY----EPDAVTYAALIDGFMKAKMIPKAH 379
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
V++Q+ +SG S TY + ++ + ++G+ + F M + G +TY L+ F
Sbjct: 380 RVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGF 439
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
EG ++ AV R M RG Y + LC G+ A EK+ R P
Sbjct: 440 CSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQ-RRLCPD 498
Query: 455 EITFTGLI--------------------ISS------------MDG----GHIDDCISIF 478
TF + +S MDG G ++ + IF
Sbjct: 499 VYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIF 558
Query: 479 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
M P++ N +++ +A E+F E R ++ PD
Sbjct: 559 HEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA--------------PDA 604
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
++Y S+L+A + + E + M L GC
Sbjct: 605 WSYWSLLDALSRCERMEEARLLSFHMKLQGC 635
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 168/423 (39%), Gaps = 45/423 (10%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ +K+ L + YT L+ L KAGR EA+ I M+E N P + Y V L + G
Sbjct: 102 MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGN-SPTLKTYTVVIDGLSKAG 160
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
++E ++ M + PD VY A+++ +
Sbjct: 161 RVEEARRIFVDMLGNGCR---------------PDAFVYTALISGLAKIGKLDEALVYLN 205
Query: 339 QLRKS----GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
Q+ ++ G++P + L + + SG + +F ++ S + + T+ LV A
Sbjct: 206 QMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLD-LTHFTFNPLVAAL 264
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ + EA+A V+ M +R T Y L GR +A+L +++ R P
Sbjct: 265 CKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVE-RGFIPD 323
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKA----K 509
+T+T +I G +++ F M++ EP+ T A++ + + M KA +
Sbjct: 324 AVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYR 383
Query: 510 ELFEETTRANSSGY------------------TFLSGDGAPLKPDEYTYSSMLEASATAH 551
++ + T ++ Y TFL+ + TYS++++ +
Sbjct: 384 QMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEG 443
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+++ M GC+ + + ++ RAGK F+ LL+ P F
Sbjct: 444 NVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFN 503
Query: 612 EML 614
L
Sbjct: 504 SFL 506
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 123/608 (20%), Positives = 243/608 (39%), Gaps = 73/608 (12%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D++ + +R V T LL L K G+ A+ L+L++ PD+ A+ V L + L
Sbjct: 3 DRKLVDTR-VCTALLNGLCKTGQLDRAM----LLLDEMPCSPDMVAFTVVINGLCREKRL 57
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E ++ER + EPD V YN ++ + + F + K++
Sbjct: 58 DEAFSVLERAVRAGC---------------EPDYVTYNVFIDGLCKAERVDDAFQLLKKM 102
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ P+ TY ++ +L++G+ D +M + G + TY V++ + G++
Sbjct: 103 DEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRV 162
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI---KSLRHSKPLEIT 457
EA +M G A VY L L G+ +A++ + ++ R +P ++
Sbjct: 163 EEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEP-DVV 221
Query: 458 FTGLIISSMDG-GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
L+I + G+++D ++ F + D + T N ++ + + +A ++ +
Sbjct: 222 IHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMS 281
Query: 517 --RANSSGYTFLSGDGAPLK--------------------PDEYTYSSMLEASATAHQWE 554
R + +T+ S LK PD TY+S+++ + E
Sbjct: 282 ERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVE 341
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLL---VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ M G + D +A L+ ++A K H + +L++G + + +
Sbjct: 342 EGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAH---RVYRQMLQSGTVVSTVTYN 398
Query: 612 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE--SNEDRISR--DKLEKLLNA 667
+L +A A AM T ++ L + +E +S + ++L+
Sbjct: 399 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 458
Query: 668 LCNCNAASSEITVSNLSRA---LHALCRSEK--ERDLSSSAHFGSQAIDISPLHGIHEAF 722
C N S I + L RA A EK +R L + + S LHG+ +
Sbjct: 459 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFN-----SFLHGLCQRL 513
Query: 723 D-----VKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLSRQADADTEM 777
D V+ E++ S S + + D + + + V ++ I H +SR D +
Sbjct: 514 DTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLE-IFHEMVSRGVAPDVVV 572
Query: 778 FSKALSYI 785
F+ + ++
Sbjct: 573 FNTLIRWL 580
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 32/314 (10%)
Query: 111 ENLRELKEMFEKDL-------NWVLDDDVQLGSDYFAKNVEWHPEKRWRS-EAEAIR--V 160
E L +LKE E+ ++D +LG + E E R R E +A+
Sbjct: 307 EALLQLKEAVERGFIPDAVTYTSIIDGLCKLGR--VEEGCERFHEMRNRGYEPDAVTYAA 364
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D + +M K + R M QSG + + +L GL G +A + ++
Sbjct: 365 LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF---LAME 421
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
++ + + Y+ L+ G A+ +F ML D P++ +Y+ + L + G L
Sbjct: 422 ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML-DRGCEPNLVSYNIIIRGLCRAGKL 480
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQ 339
+ E++ Q+ L PD+ +N+ L+ C +F+
Sbjct: 481 AKAYFYFEKLLQRR---------------LCPDVYTFNSFLHGLCQRLDTVGDGVELFES 525
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ G P+ +Y + M+ + ++G ++ E F +M G A + + L+R G+
Sbjct: 526 MVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGR 585
Query: 400 INEAVAAVRNMEQR 413
++EA+ R +E+R
Sbjct: 586 VDEALEVFRELERR 599
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 19/275 (6%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG+P +A+++F L + + + D+A+++++ L + +++ +L +R + S
Sbjct: 133 AGKPDKAVKLF-LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV---- 187
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
D V YN +LN + V K++ + G+ P+ TY ++
Sbjct: 188 ------------DTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFF 235
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++G+ EFF +M K I +TY +V F G+I A M + GV+ + +
Sbjct: 236 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 295
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y + LC ++A+++ E++ R +P T+ LI G + Q
Sbjct: 296 TYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 354
Query: 481 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
M++ CEPN T N M++ YS KA LFE+
Sbjct: 355 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 389
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 41/297 (13%)
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
++ +++SLR P TF + G D + +F +M +H C ++ + N +L V
Sbjct: 107 LIHRMRSLRIG-PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 165
Query: 500 SRNDMFSKAKELFE--------ETTRANS--SGYTFLSGDGAPLK-----------PDEY 538
++ KA ELF +T N +G+ + L+ P+
Sbjct: 166 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLT 225
Query: 539 TYSSMLE----ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
TY++ML+ A H WE+F + K C++D + ++ AG+ +
Sbjct: 226 TYNTMLKGFFRAGQIRHAWEFFLEMKK----RDCEIDVVTYTTVVHGFGVAGEIKRARNV 281
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFE 650
FD ++ G +P + M+ + N E AV + M Y P T LF
Sbjct: 282 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 341
Query: 651 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGS 707
+ E + ++++ N C N + + + S SE E+ L GS
Sbjct: 342 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC------SEVEKALGLFEKMGS 392
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 74/182 (40%), Gaps = 18/182 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y +L +AG+ A F + DC + D+ Y +V G G +K
Sbjct: 226 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI--DVVTYTTVVHGFGVAGEIK------- 276
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R +N+ + + P + YNA++ + +F+++ + G +P+
Sbjct: 277 --------RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPN 328
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + + +G++ E ++M G TY +++R + E ++ +A+
Sbjct: 329 VTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFE 388
Query: 409 NM 410
M
Sbjct: 389 KM 390
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 25/239 (10%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK-DKRDLKSRF 229
T K + ++ M + G+ +LKG G R A W + L+ KRD +
Sbjct: 205 TPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA-----WEFFLEMKKRDCEIDV 259
Query: 230 V-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V YT ++ G AG A +F+ M+ + + P +A Y+++ L + ++ V + E
Sbjct: 260 VTYTTVVHGFGVAGEIKRARNVFDEMIRE-GVLPSVATYNAMIQVLCKKDNVENAVVMFE 318
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M ++ EP++ YN ++ + ++ + +++ G +P+
Sbjct: 319 EMVRRG---------------YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 363
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL-TYKVLVRAFWEEGKINEAVAA 406
TY + + + + + F KM SG+ + L TY +L+ + + + V A
Sbjct: 364 FQTYNMMIRYYSECSEVEKALGLFEKMG-SGDCLPNLDTYNILISGMFVRKRSEDMVVA 421
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 179/399 (44%), Gaps = 46/399 (11%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D++SR TKL+ L + GRP EA IFN ++E+ + P + Y ++ L + L
Sbjct: 318 DVRSR---TKLMNGLIERGRPQEAHSIFNTLIEEGH-KPSLITYTTLVTALTRQKHFHSL 373
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ LI ++ + L+PD +++NA++NA S +F+++++S
Sbjct: 374 LSLISKVEKNG---------------LKPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI--GALTYKVLVRAFWEEGKIN 401
G KP+A+T+ ++ + GK + M + E + T +LV+A+ + KI
Sbjct: 419 GCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRD-EMLQPNDRTCNILVQAWCNQRKIE 477
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFT 459
EA V M+ GV + LA G A ++ I + H+K P T
Sbjct: 478 EAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTCG 535
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY-SRNDM--FSKAKELFEET 515
++ + G +++ + F MK+ PN+ N+++K + + NDM + +L EE
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 595
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+KPD T+S+++ A ++ + E +Y M G D
Sbjct: 596 G----------------VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 639
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ L +RAG+ E + + + G P+ + +T+++
Sbjct: 640 SILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQII 678
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 124/323 (38%), Gaps = 24/323 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ SE + K M +SG T L+KG G G ++ +LD + L+
Sbjct: 395 IINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM--LR 452
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-L 279
D+ + L+ + EA I M + + PD+ ++++A ++G
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM-QSYGVKPDVVTFNTLAKAYARIGST 511
Query: 280 LKELVKLIERM---RQKPSKRIKNMHRKNW-----------------DPVLEPDLVVYNA 319
+I RM + KP+ R + + + P+L V+N+
Sbjct: 512 CTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNS 571
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ + + GV V + + G+KP T+ M G E + M + G
Sbjct: 572 LIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGG 631
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ +L + + G+ +A + M + GV +Y ++ C+ G + AM
Sbjct: 632 IDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAM 691
Query: 440 LVVEKIKSLRHSKPLEITFTGLI 462
V +K+ + P T+ LI
Sbjct: 692 QVYKKMCGIVGLSPNLTTYETLI 714
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 88/198 (44%), Gaps = 22/198 (11%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPS--- 295
G+ EALR F M E ++P++ ++S+ + + + + E+V L+E KP
Sbjct: 545 GKMEEALRFFYRMKE-LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVT 603
Query: 296 --------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
KR + ++ + ++PD+ ++ + + + + + Q+R
Sbjct: 604 FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMR 663
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK-SGEAIGALTYKVLVRAFWEEGKI 400
K G++P+ Y + +G+ + ++KM G + TY+ L+ F E +
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQP 723
Query: 401 NEAVAAVRNMEQRGVVGT 418
+A +++ME + VV T
Sbjct: 724 WKAEELLKDMEGKNVVPT 741
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 175/434 (40%), Gaps = 30/434 (6%)
Query: 133 QLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQ 192
+LG +F W +R +++D L++ + WK + + S +
Sbjct: 78 ELGFRFFI----WTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPT 133
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
L+ G +A+ + K D+ F Y +L ++ + AL ++N
Sbjct: 134 FSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDV---FTYNSILHVMVQKEVFLLALAVYN 190
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-----------------PS 295
ML+ N P+ A + + L + G + +K+ + M QK +
Sbjct: 191 QMLK-LNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQA 249
Query: 296 KRIKNMHRK-NWDPV--LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
KR ++HR N V PD + NA+L+ Q F + + K G Y
Sbjct: 250 KRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGY 309
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++ + ++ +YD V E+ RKM K+G + Y +L+R F E G ++ A+ + +M Q
Sbjct: 310 SSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQ 369
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
RG+ Y L C+ G A + +I S P T+T LI G +D
Sbjct: 370 RGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI-SKNDCFPTSCTYTILICGMCRNGLLD 428
Query: 473 DCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ IF M++ C P+I T NA++ + +A+ LF + + GA
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGA 488
Query: 532 PLKPDEYTYSSMLE 545
D + +M+E
Sbjct: 489 DRVMDTASLQTMVE 502
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 111/280 (39%), Gaps = 8/280 (2%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ E M + M Q GL L+KG D G +A S+ +
Sbjct: 346 ILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI--- 402
Query: 220 KDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
K D + YT L+ + + G EA +IFN M E+ P I ++++ L + G
Sbjct: 403 -SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM-ENLGCSPSIMTFNALIDGLCKAG 460
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L+E L +M + + + D V+ D ++ S + +
Sbjct: 461 ELEEARHLFYKMEIGKNPSLFLRLSQGADRVM--DTASLQTMVERLCESGLILKAYKLLM 518
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
QL SG+ P TY + + ++ + + FR++ G + ++TY L+ F
Sbjct: 519 QLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVD 578
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+ +A + M + G +++VY L C G+ A
Sbjct: 579 REEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVA 618
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 19/275 (6%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG+P +A+++F L + + + D+A+++++ L + +++ +L +R + S
Sbjct: 139 AGKPDKAVKLF-LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV---- 193
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
D V YN +LN + V K++ + G+ P+ TY ++
Sbjct: 194 ------------DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++G+ EFF +M K I +TY +V F G+I A M + GV+ + +
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y + LC ++A+++ E++ R +P T+ LI G + Q
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 481 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
M++ CEPN T N M++ YS KA LFE+
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 395
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 41/297 (13%)
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
++ +++SLR P TF + G D + +F +M +H C ++ + N +L V
Sbjct: 113 LIHRMRSLRIG-PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 500 SRNDMFSKAKELFE--------ETTRANS--SGYTFLSGDGAPLK-----------PDEY 538
++ KA ELF +T N +G+ + L+ P+
Sbjct: 172 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 539 TYSSMLE----ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
TY++ML+ A H WE+F + K C++D + ++ AG+ +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKK----RDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFE 650
FD ++ G +P + M+ + N E AV + M Y P T LF
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 651 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGS 707
+ E + ++++ N C N + + + S SE E+ L GS
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC------SEVEKALGLFEKMGS 398
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 75/182 (41%), Gaps = 18/182 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y +L +AG+ A F M + DC + D+ Y +V G G +K
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI--DVVTYTTVVHGFGVAGEIK------- 282
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R +N+ + + P + YNA++ + +F+++ + G +P+
Sbjct: 283 --------RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPN 334
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + + +G++ E ++M G TY +++R + E ++ +A+
Sbjct: 335 VTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFE 394
Query: 409 NM 410
M
Sbjct: 395 KM 396
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLK-DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNL 253
+LKG G R A W + L+ KRD + V YT ++ G AG A +F+
Sbjct: 236 MLKGFFRAGQIRHA-----WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M+ + + P +A Y+++ L + ++ V + E M ++ EP+
Sbjct: 291 MIRE-GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG---------------YEPN 334
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ YN ++ + ++ + +++ G +P+ TY + + + + + F
Sbjct: 335 VTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFE 394
Query: 374 KMAKSGEAIGAL-TYKVLVRAFWEEGKINEAVAA 406
KM SG+ + L TY +L+ + + + V A
Sbjct: 395 KMG-SGDCLPNLDTYNILISGMFVRKRSEDMVVA 427
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 164/389 (42%), Gaps = 42/389 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L+ L D G ++AM VLD + D+ YT L+ +A+++ + M
Sbjct: 214 ILRSLCDSGKLKEAMEVLDRQLQRECYPDV---ITYTILIEATCNDSGVGQAMKLLDEMR 270
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD+ Y+ + + + G L E +K + M PS K P+++
Sbjct: 271 KK-GCKPDVVTYNVLINGICKEGRLDEAIKFLNNM---PSYGCK------------PNVI 314
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N +L + + +W + + + G PS T+ + + + + + KM
Sbjct: 315 THNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 374
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G +L+Y L+ F +E K++ A+ + M RG Y L LC +G+
Sbjct: 375 PKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKV 434
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ ++ ++ S + P+ IT+ +I G + + + + M + +P+I T +
Sbjct: 435 DAAVEILNQLSS-KGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYST 493
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML----EASATA 550
+L+ R +A ++F + +G +KP TY++++ +A T+
Sbjct: 494 LLRGLGREGKVDEAIKIFHDM-------------EGLSIKPSAVTYNAIMLGLCKAQQTS 540
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++ Y M GC+ + + L+
Sbjct: 541 RAIDFLAY----MVEKGCKPTEATYTILI 565
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 169/449 (37%), Gaps = 56/449 (12%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
T K + + I+ SG + L+ G G +A+ VL+ + D
Sbjct: 157 TKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDV------VT 210
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHS-VAVTLGQVGLLKELVKLIE 288
Y +L L +G+ EA+ + + L+ +C YPD+ Y + T G+ + +KL++
Sbjct: 211 YNTILRSLCDSGKLKEAMEVLDRQLQREC--YPDVITYTILIEATCNDSGV-GQAMKLLD 267
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR+K K PD+V YN ++N + + G KP+
Sbjct: 268 EMRKKGCK---------------PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPN 312
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ + + M +G++ M + G + +T+ +L+ + + A+ +
Sbjct: 313 VITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 372
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M + G V + Y L C + A+ +E + S R P +T+ L+ +
Sbjct: 373 KMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS-RGCYPDIVTYNTLLTALCKD 431
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G +D + I + C P + T N ++ ++ A EL EE R
Sbjct: 432 GKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKG-------- 483
Query: 528 GDGAPLKPDEYTYSSML----------EASATAHQWEYFE-----YVYKGMALSGCQLDQ 572
LKPD TYS++L EA H E Y + L C+ Q
Sbjct: 484 -----LKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQ 538
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
T A + C E + L+E
Sbjct: 539 TSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/454 (20%), Positives = 169/454 (37%), Gaps = 43/454 (9%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D+ T L+ ++G+ +A RI + LE+ PD+ Y+ + + G + +
Sbjct: 137 DIPDVIACTSLIRGFCRSGKTKKATRIMEI-LENSGAVPDVITYNVLIGGYCKSGEIDKA 195
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
++++ERM + PD+V YN +L + S + K V + +
Sbjct: 196 LEVLERMS------------------VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQR 237
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
P TY + +E + +M K G +TY VL+ +EG+++EA
Sbjct: 238 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 297
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ + NM G + + +C+ GRW DA ++ + + P +TF LI
Sbjct: 298 IKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR-KGCSPSVVTFNILIN 356
Query: 464 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--- 519
+ I + + M H C PN + N +L + + +A E E
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416
Query: 520 -----SSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQWEYFEYVY 560
++ T L DG P TY+++++ + EY +
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
+ M G + D ++ LL R GK F + P + + +++
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 536
Query: 621 SNYEKAVALINAMAYAPFHITERQWTELFESNED 654
+A+ + M TE +T L E D
Sbjct: 537 QQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 129/344 (37%), Gaps = 37/344 (10%)
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
++++G+ + +F +M G+ + L+R F GK +A + +E G V
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y L C +G A+ V+E++ P +T+ ++ S D G + + + +
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMS----VAPDVVTYNTILRSLCDSGKLKEAMEVL 231
Query: 479 -QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
+ ++ C P++ T +++ + +A +L +E + KPD
Sbjct: 232 DRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC-------------KPDV 278
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
TY+ ++ + + M GC+ + H +L G+ E
Sbjct: 279 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSD 338
Query: 598 LLEAGEIPHPLFFT---------EMLIQAI-VQSNYEKAVALINAMAYAPF---HITERQ 644
+L G P + F +L +AI V K + N+++Y P E++
Sbjct: 339 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKK 398
Query: 645 WTELFESNEDRISRD------KLEKLLNALCNCNAASSEITVSN 682
E E +SR LL ALC + + + N
Sbjct: 399 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN 442
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 21/238 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L++ L + + + + M + G + LL G + +A+ L+ +
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVG 278
D+ Y LL L K G+ A+ I N L + C+ P + Y++V L +VG
Sbjct: 413 GCYPDI---VTYNTLLTALCKDGKVDAAVEILNQLSSKGCS--PVLITYNTVIDGLTKVG 467
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ V+L+E MR+K L+PD++ Y+ +L + +F
Sbjct: 468 KTEYAVELLEEMRRKG---------------LKPDIITYSTLLRGLGREGKVDEAIKIFH 512
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
+ +KPSA TY M + ++ + +F M + G TY +L+ +
Sbjct: 513 DMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 133/304 (43%), Gaps = 23/304 (7%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y +++ C Q + + ++R G+ + TY M V +++ + DL + +++M
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINE----AVAAVRNMEQRGVVGTASVYYELACCLCN 431
+ G + +TY +L+ + K E AVA VR+ G+ Y +
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRS----GIQAEVRTYNTVISACNK 117
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+G+ + A+ V EK+ + KP T+T LI + G ++ + IF+ M + CE N+
Sbjct: 118 SGQPEQALKVYEKMLAA-GVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVI 176
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T ++++ + + A ELF + + N KP+ TY+S++ A +
Sbjct: 177 TYSSLISACEKAGRWEMALELFSKMHKENC-------------KPNVVTYNSLIAACSHG 223
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
WE +++ M GC+ D + L+ R G+ AF+ + G P F
Sbjct: 224 GHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVF 283
Query: 611 TEML 614
++
Sbjct: 284 NSLM 287
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 18/294 (6%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
GS +Q L+ V ++ + + Y+ L+ + KA A ++ MLE+ P+
Sbjct: 11 GSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEE-GCSPN 69
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y+ ++ +E ++K ++R + + ++ ++ YN V++A
Sbjct: 70 LVTYN--------------ILIDVEASKRKTTER-RRLAVALVRSGIQAEVRTYNTVISA 114
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
C S Q + V++++ +G+KPSA TY + + G+ + + FR M + G
Sbjct: 115 CNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERN 174
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+TY L+ A + G+ A+ M + Y L + G W+ A + E
Sbjct: 175 VITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFE 234
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 496
++++ + KP IT+ GLI + GG + F+ M+ C P+ N+++
Sbjct: 235 QMQT-QGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 31/319 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y ++A GR AL I M E + P+ Y +V +VG + E VK+ +
Sbjct: 187 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 246
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K ++P+ V+YNA++ + ++ + G+ +
Sbjct: 247 MLTKGE--------------VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 292
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
ATY L + + G+ +E +M G A+ TY +L+ +EG + +A+ N
Sbjct: 293 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFEN 352
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +RGV T Y L L G+ Q+ L E ++ R +P + + LI S
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR--RGIRPDLVLYNALINSHSTS 410
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G+ID I M K P+ T N +++ +A++L +E T+
Sbjct: 411 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG-------- 462
Query: 528 GDGAPLKPDEYTYSSMLEA 546
++PD TY++++
Sbjct: 463 -----IQPDLVTYNTLISG 476
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 19/247 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ K G +AL IF M + + Y S+ L + G ++E KL +
Sbjct: 328 FTYNILINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTSLIYALSKKGQVQETDKLFD 386
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ + PDLV+YNA++N+ S F + ++ K + P
Sbjct: 387 EAVRRG---------------IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 431
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY M + G+ D + +M K G +TY L+ + +G + +A+
Sbjct: 432 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 491
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI--ISSM 466
M +G T Y L LC NG+ DA +V+++ P + T+ LI +++
Sbjct: 492 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE-NGITPDDSTYISLIEGLTTE 550
Query: 467 DGGHIDD 473
D IDD
Sbjct: 551 DERAIDD 557
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/340 (16%), Positives = 122/340 (35%), Gaps = 32/340 (9%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N +L A ++ +++ L S A+ + + + + L + FR
Sbjct: 92 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLP 151
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+ T+ +++R GK A+ +R M + V Y + C+ GR Q
Sbjct: 152 ----LCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQA 203
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAM 495
A+ ++ +++ P + T+ +I G +D+ + +F M K +P NA+
Sbjct: 204 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 263
Query: 496 LKVYSRNDMFSKA----KELFEETTRANSSGYT------FLSGDGAP------------L 533
+ Y A + E + Y F+ G G L
Sbjct: 264 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 323
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
D +TY+ ++ + +++ M+ G + + L+ S+ G+ +
Sbjct: 324 ALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDK 383
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
FD + G P + + ++ N ++A ++ M
Sbjct: 384 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 107/548 (19%), Positives = 222/548 (40%), Gaps = 42/548 (7%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
VLD DV++ + + +W +++ ++ ++ L+ L E + + W+ ++ M +S
Sbjct: 97 VLDIDVEIRAKI--QFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSP 154
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
+ ++LK LG +A+SV Y +K ++ + VY L+ +L G
Sbjct: 155 CSVGPAEWSEILKILGKAKMVNKALSVF---YQIKGRKCNPTATVYNTLILMLMHEGHHE 211
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN-- 300
+ ++N + + N PD Y ++ G++ +L + M++ P+++I
Sbjct: 212 KIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTI 271
Query: 301 --MHRK--NWDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
M+ K + L P + Y ++ + + +F + K G
Sbjct: 272 LAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGC 331
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAV 404
KP + ++ ++G+ + + F KM A +TY +++A +E + +EA
Sbjct: 332 KPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAA 391
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
M+ G+ ++ Y L C R + A+L++E++ + P + LI S
Sbjct: 392 LWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDE-KGFPPCPAAYCSLIDS 450
Query: 465 SMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ +FQ +K++C + V A M+K + S A +LF E + S
Sbjct: 451 LGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCS-- 508
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
PD YTY++++ A + + + M +GC D H +L +
Sbjct: 509 -----------PDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLA 557
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
+ G F + E+ +P + + +L +E A L+ M F
Sbjct: 558 KTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSI 617
Query: 644 QWTELFES 651
++ + E+
Sbjct: 618 TYSSILEA 625
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 100/243 (41%), Gaps = 22/243 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQE---L 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ G GR +A+ +F E PD+ Y+++ + + G+
Sbjct: 468 KENCGRSSARVYAVMIKHFGNCGRLSDAVDLF-CEXEKLGCSPDVYTYNALMSGMIRAGM 526
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ E L+ MR+ PD+ +N +LN + K +F +
Sbjct: 527 IDEAHSLMRNMRENGCT---------------PDIKSHNIILNGLAKTGGPKRAIEMFTK 571
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+++S + P A +Y + + ++G +++ + R+M G ++TY ++ A GK
Sbjct: 572 MKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV---GK 628
Query: 400 INE 402
++E
Sbjct: 629 VDE 631
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 201/511 (39%), Gaps = 70/511 (13%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + + +K + M GL L++ L G QA SV +
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + ++ L KAGR A+RIF M E L P+ Y ++ L + +
Sbjct: 122 CVPDV---VTLSTMIDGLSKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKM 177
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++++ +M++ PD + YN +++ S + F ++
Sbjct: 178 DCALEMLAQMKK---------------AFCTPDTITYNVLIDGLCKSGDVEAARAFFDEM 222
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLV-HEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++G KP TY + + ++G D H ++ +G I TY +V + K
Sbjct: 223 LEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKK 282
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI-------------- 445
I EAVA + + G T + Y L LC GR ++A+ ++ KI
Sbjct: 283 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 342
Query: 446 --------------------KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 484
+LR + +T LI + G I S+++ M H
Sbjct: 343 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 402
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
C P++ T++ M+ D SKA R ++ F S + L P+E YS+++
Sbjct: 403 CVPDVVTLSTMI------DGLSKAG-------RIGAAVRIFKSMEARGLAPNEVVYSALI 449
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
A + + + M + C D + L+ ++G FD +LEAG
Sbjct: 450 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 509
Query: 605 PHPLFFTEMLIQAIVQS-NYEKAVALINAMA 634
P ++ +LI ++ N + A + + M+
Sbjct: 510 PD-VYTYNILISGFCKAGNTDAACGVFDDMS 539
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 114/540 (21%), Positives = 219/540 (40%), Gaps = 58/540 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G +A +D + + D YT L+ LGK R EA ++F M
Sbjct: 27 LLNGLCKMGRLEEA---IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 83
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-----------------------RQ 292
L D Y ++ L Q G + + + + M R
Sbjct: 84 LR-GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 142
Query: 293 KPSKRI-KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ RI K+M + L P+ VVY+A+++ + + + Q++K+ P T
Sbjct: 143 GAAVRIFKSMEARG----LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 198
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + ++ + +SG + FF +M ++G TY +L+ F + G + AA ++
Sbjct: 199 YNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTD---AASHSLA 255
Query: 412 QRGVVGTASV----YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
Q + ++ Y + L N + ++A+ ++EKI + P T+ L+
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITA-NGCTPTIATYNALLNGLCK 314
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +++ I + + + D+ C P++ T +++ + +A +LF+E L
Sbjct: 315 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA---------L 365
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
G L D Y++++ + VYK M GC D + ++ S+AG
Sbjct: 366 RG----LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---PFHITER 643
+ F S+ G P+ + ++ ++ + A+ ++ M A P IT
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 481
Query: 644 QWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSS 702
+ L +S + +R +++L A C + + I +S +A + D+SSS
Sbjct: 482 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSS 541
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 151/387 (39%), Gaps = 37/387 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF--NL 253
L+ GL G A + D + K D+ + Y L++ KAG A
Sbjct: 202 LIDGLCKSGDVEAARAFFDEMLEAGCKPDV---YTYNILISGFCKAGNTDAASHSLAQET 258
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ C + DI Y ++ L + ++E V L+E++ P
Sbjct: 259 TINGCTI--DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT---------------PT 301
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ YNA+LN + + + +++ +G P TY ++ + + + ++ F+
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+MA G A+ + Y L+R + GKI +A + + M G V + L G
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 492
R A+ + + +++ R P E+ ++ LI +D + + MK C P+ T
Sbjct: 422 RIGAAVRIFKSMEA-RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 480
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N ++ ++ A+ F+E A KPD YTY+ ++ A
Sbjct: 481 NILIDGLCKSGDVEAARAFFDEMLEAGC-------------KPDVYTYNILISGFCKAGN 527
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ V+ M+ S C + + L+
Sbjct: 528 TDAACGVFDDMSSSRCSANVVTYGALI 554
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 148/357 (41%), Gaps = 35/357 (9%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P IA Y+++ L ++G L+E + L+ RK D PD+V Y +++
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLL---------------RKIVDNGCTPDVVTYTSLI 63
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + + +FK++ GL Y + +LQ+GK ++ M G
Sbjct: 64 DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+T ++ + G+I AV ++ME RG+ VY L LC + A+ +
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS 500
+ ++K P IT+ LI G ++ + F M + C+P++ T N ++ +
Sbjct: 184 LAQMKK-AFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 242
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ A + T N G T D +TY+++++ A + E +
Sbjct: 243 KAGNTDAASHSLAQETTIN--GCTI----------DIHTYTAIVDWLAKNKKIEEAVALM 290
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLFFTEML 614
+ + +GC + LL + G+ LE A D L ++ G P + +T ++
Sbjct: 291 EKITANGCTPTIATYNALLNGLCKMGR---LEEAIDLLRKIVDNGCTPDVVTYTSLI 344
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 126/320 (39%), Gaps = 35/320 (10%)
Query: 143 VEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGD 202
V+W + + EA A L+++++ T + ++N M + + LL+ + D
Sbjct: 274 VDWLAKNKKIEEAVA---LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 330
Query: 203 KGSWRQAMSVLDWVYGL-KDKRDLKS---------------RFVYTKLLAILGKAGRPHE 246
G ++ + GL K+KR ++ YT L+ L + G+ +
Sbjct: 331 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQ 390
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A ++ M PD+ ++ L + G + V++ + M +
Sbjct: 391 ASSVYKTMTSH-GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG------------ 437
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
L P+ VVY+A+++ + + + Q++K+ P TY + ++ + +SG +
Sbjct: 438 ---LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 494
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
FF +M ++G TY +L+ F + G + A +M Y L
Sbjct: 495 AARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALI 554
Query: 427 CCLCNNGRWQDAMLVVEKIK 446
LC + A L + +K
Sbjct: 555 SGLCKRRQLTKASLYFQHMK 574
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 106/254 (41%), Gaps = 19/254 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + + +K + M GL L++ L G QA SV +
Sbjct: 343 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 402
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + ++ L KAGR A+RIF M E L P+ Y ++ L + +
Sbjct: 403 CVPDV---VTLSTMIDGLSKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKM 458
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++++ +M++ PD + YN +++ S + F ++
Sbjct: 459 DCALEMLAQMKK---------------AFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 503
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
++G KP TY + + ++G D F M+ S + +TY L+ + ++
Sbjct: 504 LEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQL 563
Query: 401 NEAVAAVRNMEQRG 414
+A ++M++RG
Sbjct: 564 TKASLYFQHMKERG 577
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 105/273 (38%), Gaps = 51/273 (18%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKY-----------------DLV---------- 368
+ +++ +G P+ ATY + + + G+ D+V
Sbjct: 8 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 67
Query: 369 --------HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++ F++MA G A+ + Y L+R + GKI +A + + M G V
Sbjct: 68 KEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVV 127
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
+ L GR A+ + + +++ R P E+ ++ LI +D + +
Sbjct: 128 TLSTMIDGLSKAGRIGAAVRIFKSMEA-RGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 186
Query: 481 MKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
MK C P+ T N ++ ++ A+ F+E A KPD YT
Sbjct: 187 MKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGC-------------KPDVYT 233
Query: 540 YSSMLEASATAHQWEYFEY-VYKGMALSGCQLD 571
Y+ ++ A + + + + ++GC +D
Sbjct: 234 YNILISGFCKAGNTDAASHSLAQETTINGCTID 266
>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 706
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 171/442 (38%), Gaps = 47/442 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL W A +++ + D + L+ ++G A+ I + M
Sbjct: 196 LLKGLCSAKQWGDAEELVEEMTRNDSPPD---DLTFGMLIHSFCQSGLVDRAMGILDRM- 251
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
C P Y+ + ++G +KE + L M KP D+
Sbjct: 252 SKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCKP------------------DIF 293
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNAVL + +W+ + ++ + P T+ + + G D E +M
Sbjct: 294 SYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQM 353
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G TY L+ AF E+G + +A+ +R+M Y + LC +G+W
Sbjct: 354 PKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMP---CSPNTVCYKSVLKGLCRDGQW 410
Query: 436 QD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC-ISIFQHMKDH-CEPNIGTV 492
+D L+ E +++ P E+ F GLII + + DC + + Q + ++ C P++
Sbjct: 411 EDVGQLIGEMVRN--DCAPDEMVF-GLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMY 467
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++L ++ + +LF+ T KP+ TY+ +L
Sbjct: 468 TSLLNGFAEYGRVDDSLKLFKSMT----------------CKPNTVTYNYVLMGLCKVEL 511
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
WE + M C ++ + L+ + G F+ + G P+ + ++
Sbjct: 512 WEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYST 571
Query: 613 MLIQAIVQSNYEKAVALINAMA 634
+ + + A+ L+N M+
Sbjct: 572 LNNGLSEKGCVDNALKLLNNMS 593
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 102/495 (20%), Positives = 192/495 (38%), Gaps = 80/495 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +AM +LD + VY ++++ + GR EAL +F+ M
Sbjct: 231 LIHSFCQSGLVDRAMGILDR---MSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCM- 286
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN------MHRKNW 306
PDI +Y++V L + ++ +LI M +K P + N H+
Sbjct: 287 ---PCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLV 343
Query: 307 DPVLE-----------PDLVVYNAVLNA------------------CVPSH--------- 328
D LE PD Y+A++NA C P+
Sbjct: 344 DCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMPCSPNTVCYKSVLKG 403
Query: 329 -----QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
QW+ V + ++ ++ P +GL ++ + Q G D E +++ G +
Sbjct: 404 LCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPD 463
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+ Y L+ F E G++++++ ++M + T + Y L LC W+DA +++
Sbjct: 464 VVMYTSLLNGFAEYGRVDDSLKLFKSMTCKP--NTVTYNYVLMG-LCKVELWEDAGKLID 520
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 502
++ + P E+TF+ LI S G ++ I +F+ M+ + C PN+ + + S
Sbjct: 521 EMVG-QECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEK 579
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
A +L + K D YSS L+ A WE +
Sbjct: 580 GCVDNALKLLNNMS----------------CKADTICYSSALKGLCRAELWEDAGELIVE 623
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M C D+ + ++ + G D +L+ P+ + ++ ++ +
Sbjct: 624 MFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGH 683
Query: 623 YEKAVALINAMAYAP 637
E A+ L+ +M P
Sbjct: 684 LEDALKLLRSMPCEP 698
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 133/335 (39%), Gaps = 29/335 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ YN +L + QW + +++ ++ P T+G+ + QSG D
Sbjct: 188 PNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGI 247
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M+K G GA+ Y ++ F E G++ EA+ M + + + + + LC
Sbjct: 248 LDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCKPDIFSYNAVLKG---LCR 304
Query: 432 NGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNI 489
RW+DA L+ E ++ + P E+TF +I G +D + + M + +P+
Sbjct: 305 AERWEDAGELITEMVR--KDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDN 362
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T +A++ +S A EL P P+ Y S+L+
Sbjct: 363 FTYSALINAFSEQGCVEDALELLRSM----------------PCSPNTVCYKSVLKGLCR 406
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPH 606
QWE + M + C D+ ++ + G L++ + L E G P
Sbjct: 407 DGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRG---LVDCGLEVLQEVPNYGCSPD 463
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
+ +T +L + ++ L +M P +T
Sbjct: 464 VVMYTSLLNGFAEYGRVDDSLKLFKSMTCKPNTVT 498
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 106/293 (36%), Gaps = 49/293 (16%)
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
++ EA A+ + LV + G++ +A +R++ G + Y L C GR +
Sbjct: 117 RASEAADAVDHNTLVAGYCRAGRLADAERMLRSLAASGAADVVT-YNTLIAGYCRGGRLE 175
Query: 437 DAMLVVEK-------------IKSLRHSK------------------PLEITFTGLIISS 465
DA L+V +K L +K P ++TF LI S
Sbjct: 176 DARLLVASMPPAPNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSF 235
Query: 466 MDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G +D + I M K C P N ++ ++ +A LF
Sbjct: 236 CQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFS----------- 284
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
P KPD ++Y+++L+ A +WE + M C D+ ++
Sbjct: 285 -----CMPCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCH 339
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
G D + + G P ++ ++ Q E A+ L+ +M +P
Sbjct: 340 KGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMPCSP 392
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 38/320 (11%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKR------ 297
A IF M++ L PD A Y+ + ++G + +++ ERM R +PS R
Sbjct: 480 AFSIFEDMIKS-GLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPII 538
Query: 298 ----IKNMHRKNWDPV-------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ ++ +D + P ++ YNA+++ V HQ + V ++ +G+
Sbjct: 539 EGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIA 598
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY + M SG E+F K+ +SG + Y+ L+RA + G++ A+A
Sbjct: 599 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 658
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISS 465
R M + + +Y L G +A +++++K P I TFT I +
Sbjct: 659 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKE--DGIPPNIHTFTSYINAC 716
Query: 466 MDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G + ++ Q M D +PN+ T ++K ++R + +A + FEE A
Sbjct: 717 CKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAG----- 771
Query: 525 FLSGDGAPLKPDEYTYSSML 544
LKPDE Y ++
Sbjct: 772 --------LKPDEAAYHCLV 783
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 127/306 (41%), Gaps = 22/306 (7%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VY+++++ K VF++L++ G KP+ +YG + + ++ GK ++M
Sbjct: 393 VYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEM 452
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G TY +L+ F A + +M + G+ ++Y L C G
Sbjct: 453 ESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNM 512
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ + E+++ R +P TF +I G + M + C P + T NA
Sbjct: 513 DRAIRIFERMQKERM-QPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNA 571
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-SATAHQW 553
++ R KA + ++ + A + P+E+TY+ ++ +A+
Sbjct: 572 LIHGLVRKHQVEKAVSVLDKMSIAG-------------IAPNEHTYTIIMRGYAASGDIG 618
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG--EIPHPLFFT 611
+ FEY K + SG +LD + LL ++G+ ++ A E +IP F
Sbjct: 619 KAFEYFTK-IKESGLKLDVYIYETLLRACCKSGR---MQSALAVTREMSFQKIPRNTFIY 674
Query: 612 EMLIQA 617
+LI
Sbjct: 675 NILIDG 680
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/341 (18%), Positives = 146/341 (42%), Gaps = 21/341 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+EP+ V+ ++++A + +G ++++ G++ + TY + + ++
Sbjct: 282 IEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSAD 341
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F++ + + + Y ++ A + G ++ A VR ME+ G+ VY+ +
Sbjct: 342 NLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGY 401
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ ++V E++K KP I++ LI + G + I+I + M+ H + N
Sbjct: 402 TVVQDEKKCLIVFERLKECGF-KPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHN 460
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T + ++ + F+ A +FE+ ++ L+PD Y+ ++EA
Sbjct: 461 NKTYSMLINGFIHLHDFANAFSIFEDMIKSG-------------LQPDRAIYNLLVEAFC 507
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIP 605
+ +++ M Q ++ + AG ++ AFD+L +G P
Sbjct: 508 KMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGD---MKRAFDTLDLMRRSGCAP 564
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
+ + ++ + + EKAV++++ M+ A E +T
Sbjct: 565 TVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYT 605
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 159/423 (37%), Gaps = 52/423 (12%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L++C P I +Y + +VG + + + + + M S IK+ ++
Sbjct: 417 LKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEME---SHGIKHNNK----------- 462
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y+ ++N + H + F +F+ + KSGL+P A Y L +E + G D F +
Sbjct: 463 -TYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFER 521
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K T++ ++ F G + A + M + G T Y L L +
Sbjct: 522 MQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQ 581
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
+ A+ V++K+ S+ P E T+T ++ G I F +K+ + ++
Sbjct: 582 VEKAVSVLDKM-SIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYE 640
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG------------------------D 529
+L+ ++ A + E + TF+ D
Sbjct: 641 TLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKED 700
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
G P P+ +T++S + A A + E V + MA G + + L+ +R
Sbjct: 701 GIP--PNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPD 758
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
F+ + AG P E +V S +A + + F + E+F
Sbjct: 759 RALKCFEEMKSAGLKPD-----EAAYHCLVTSLLSRATVMEGSTYTGIFSVCR----EMF 809
Query: 650 ESN 652
E++
Sbjct: 810 END 812
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 19/275 (6%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG+P +A+++F L + + + D+A+++++ L + +++ +L +R + S
Sbjct: 139 AGKPDKAVKLF-LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV---- 193
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
D V YN +LN + V K++ + G+ P+ TY ++
Sbjct: 194 ------------DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++G+ EFF +M K I +TY +V F G+I A M + GV+ + +
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y + LC ++A+++ E++ R +P T+ LI G + Q
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 481 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
M++ CEPN T N M++ YS KA LFE+
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 395
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 41/297 (13%)
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
++ +++SLR P TF + G D + +F +M +H C ++ + N +L V
Sbjct: 113 LIHRMRSLRIG-PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 500 SRNDMFSKAKELFE--------ETTRANS--SGYTFLSGDGAPLK-----------PDEY 538
++ KA ELF +T N +G+ + L+ P+
Sbjct: 172 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 539 TYSSMLE----ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
TY++ML+ A H WE+F + K C++D + ++ AG+ +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKK----RDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFE 650
FD ++ G +P + M+ + N E AV + M Y P T LF
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 651 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGS 707
+ E + ++++ N C N + + + S SE E+ L GS
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC------SEVEKALGLFEKMGS 398
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 19/217 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y +L +AG+ A F M + DC + D+ Y +V G G +K
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI--DVVTYTTVVHGFGVAGEIK------- 282
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R +N+ + + P + YNA++ + +F+++ + G +P+
Sbjct: 283 --------RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPN 334
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + + +G++ E ++M G TY +++R + E ++ +A+
Sbjct: 335 VTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFE 394
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
M + Y L + R +D M+V K+
Sbjct: 395 KMGSGDCLPNLDTYNILISGMFVRKRSED-MVVAGKL 430
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 148/364 (40%), Gaps = 45/364 (12%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
G+ AL++F +L+D N P + Y + G + E +KL++ M +
Sbjct: 93 GKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRG------- 145
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
LEPD YN + + F + L G KP TY + + +L
Sbjct: 146 --------LEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLN 197
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
GK+D ++ ++ G +TY +L+ + +GKI E+V V+ M+++G+ A
Sbjct: 198 QGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYC 257
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y L C G+ A+ ++ + P + + ++ + G+ D + IF +
Sbjct: 258 YDPLIAAFCREGKLDMAIEFLDCMIC-DGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKL 316
Query: 482 KD-HCEPNIGTVNAMLK-VYSRND----------MFSKAKELFEETTRANSSGYTFLSGD 529
+ C PN+ + N ML ++S D M SK + +S + L D
Sbjct: 317 DEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKG---IDPDVITYNSLISCLCRD 373
Query: 530 G--------------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
G +P+ +Y ++L AH+ + V M +GCQ ++T +
Sbjct: 374 GMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTY 433
Query: 576 AWLL 579
L+
Sbjct: 434 TLLI 437
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 130/328 (39%), Gaps = 22/328 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD+ YNAV++ +++ + V ++++ G P T+ + + GK DL +
Sbjct: 41 KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100
Query: 371 FFRKMAKSGEAIGAL-TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F ++ K L TY +L+ A+ EG I+EA+ + M RG+ Y + L
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD----CISIFQHMKDHC 485
C G+ A V + S R KP IT+ L+ + ++ G D+ IF C
Sbjct: 161 CKEGKVDRAFEFVRTLNS-RGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR---GC 216
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
EPN+ T + ++ R+ ++ L + L PD Y Y ++
Sbjct: 217 EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG-------------LTPDAYCYDPLIA 263
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
A + + M G D + ++ + G F L E G P
Sbjct: 264 AFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPP 323
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ + ML + +A+ +I+ M
Sbjct: 324 NVSSYNTMLSALWSSGDRYRALGMISQM 351
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 152/380 (40%), Gaps = 31/380 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ AY++V + ++ +++RM++K PD+V +N ++
Sbjct: 42 PDVFAYNAVISGFCKANRIESAKTVLDRMKRKG---------------FSPDVVTHNIMI 86
Query: 322 NACVPSHQWKGVFWVFKQLRK-SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+ VF++L K + KP+ TY + +E + G D + +M G
Sbjct: 87 GTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGL 146
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
TY V+ R +EGK++ A VR + RG Y L L N G+W +
Sbjct: 147 EPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEK 206
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
+ +I S R +P +T++ LI S G I++ +++ + MK+ P+ + ++ +
Sbjct: 207 WMSEIFS-RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAF 265
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
R A E + + DG PD Y++++ A ++ +
Sbjct: 266 CREGKLDMAIEFLD-----------CMICDG--FLPDIVNYNTIMAALCKNGNGDHAVEI 312
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
+ + GC + + + +L +G + +L G P + + ++
Sbjct: 313 FGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCR 372
Query: 620 QSNYEKAVALINAMAYAPFH 639
++A+ L+ M F
Sbjct: 373 DGMVDEAIGLLADMLSGRFQ 392
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 104/251 (41%), Gaps = 17/251 (6%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P++ Y + +L + G ++E V L++ M++K L PD Y+ ++
Sbjct: 218 PNVVTYSILISSLCRDGKIEESVNLVKVMKEKG---------------LTPDAYCYDPLI 262
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
A + + G P Y M + ++G D E F K+ + G
Sbjct: 263 AAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCP 322
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+Y ++ A W G A+ + M +G+ Y L CLC +G +A+ +
Sbjct: 323 PNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGL 382
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
+ + S R +P +++ +++ IDD I + M ++ C+PN T +++
Sbjct: 383 LADMLSGRF-QPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIG 441
Query: 501 RNDMFSKAKEL 511
+ ++A EL
Sbjct: 442 FSGSRTQAMEL 452
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 113/523 (21%), Positives = 213/523 (40%), Gaps = 65/523 (12%)
Query: 172 AKNWK----FVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD 224
A NWK + M ++G+ + T +L LK + + +A+S + + G D
Sbjct: 94 AGNWKKALELCKKMTENGVGPDLVTHNIVLSALK---NGAQYSKAISYFEIMKGANVTSD 150
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKEL 283
F ++ L K G+ EA+ +FN M E PD+ Y S+ + G ++
Sbjct: 151 ---TFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC 207
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ + M + K P++V YN++L A + +F ++K+
Sbjct: 208 KAIFDLMVAEGVK---------------PNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
GL+P +Y + +S + + E F KM K+ ++Y L+ A+ G + EA
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312
Query: 404 VAAVRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE---ITFT 459
V + ME+ G+ S+ LA C GR + + +E I S+ ++ + +
Sbjct: 313 VGLLHEMEKDGIQPDVVSISTLLAAC----GRCRQ-ITRIETILEAARSRGIDLNTVAYN 367
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
I S + G + + ++ M++ + +P+ T N ++ S+ ++++ FE+ +
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDS 427
Query: 519 NSSGY----------TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
S TF S + PD TY+++++A W+ ++K M ++G
Sbjct: 428 KVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGI 487
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
D A C L AF+ + GE L E + + + N +
Sbjct: 488 PPD-------------AIICSSLMEAFN---KGGEPERVLQLMEFMKKKSIPLNQKSYFE 531
Query: 629 LINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 671
+I + T + E +S+ IS L +LN L C
Sbjct: 532 IIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKC 574
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 138/327 (42%), Gaps = 17/327 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P YN V+NAC + WK + K++ ++G+ P T+ + + + +Y
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAI 136
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV--YYELAC 427
+F M + T +++ + G+ EA+ +M +R V Y +
Sbjct: 137 SYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMH 196
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
C G+ ++ + + + + KP + + L+ + G + ++IF + K+
Sbjct: 197 SYCIYGQVENCKAIFDLMVA-EGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLR 255
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+I + ++L Y R+ KA+E+F + + NS KP++ +Y+++++A
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEKAREVFNK-MKKNSC------------KPNKVSYNALIDA 302
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+A + + M G Q D + LL R + +E ++ G +
Sbjct: 303 YGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLN 362
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAM 633
+ + + + +YEKA+ L +M
Sbjct: 363 TVAYNSGIKSYLSFGDYEKALELYTSM 389
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 16/221 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT L+ G A +F M E + PD S+ + G + +++L+E
Sbjct: 457 LTYTTLIQAYNAGGGWKRAWDLFKEM-EVNGIPPDAIICSSLMEAFNKGGEPERVLQLME 515
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M++K +++K+ Y ++ +C WK + + L S S
Sbjct: 516 FMKKKSIP----LNQKS-----------YFEIIASCTMIRDWKTASEMIEYLDSSLSSIS 560
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T + + + GK + + + F KM S +G TY V++R GK + + ++
Sbjct: 561 VGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQ 620
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
ME GV T ++ + + A + EKI SLR
Sbjct: 621 WMEDSGVHPTLYMFQNVLPYIWRENGMDFAATMQEKISSLR 661
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 165/412 (40%), Gaps = 42/412 (10%)
Query: 173 KNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF 229
K WK + M Q GL +T G ++ LL + +A S + + L
Sbjct: 722 KVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFS------EMIGQGILPDTI 775
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VYT L+ K G A + F M ++ PD+ Y ++ Q+G + E KL
Sbjct: 776 VYTTLVDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + LEPD++ + ++N + K F V + ++G P+
Sbjct: 835 MLCRG---------------LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNV 879
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY ++ + + G D +E +M K G TY +V + G I EAV V
Sbjct: 880 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 939
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
E G+ Y L C +G A ++ ++ + +P +TF L+ G
Sbjct: 940 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLG-KGLQPTIVTFNVLMNGFCLHG 998
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS-RNDMFSKAKELFEETTRANSSGYTFLS 527
++D + M PN T N ++K Y RN++ +A ++ Y +
Sbjct: 999 MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNL------------KAATAIYKDMC 1046
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
G ++PD TY ++++ A + ++++ M G + + ++ L+
Sbjct: 1047 SRG--VEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1096
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 144/372 (38%), Gaps = 30/372 (8%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
++A+Y+ V + Q+G + E L+ M K PD++ Y+ V+N
Sbjct: 668 NVASYNIVIHFVCQLGRINEAHHLLLLMELKG---------------YTPDVISYSTVIN 712
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+ V+ + +++++ GLKP++ TYG + ++ + K E F +M G
Sbjct: 713 GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ Y LV F + G I A M R + Y + C G +A +
Sbjct: 773 DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 832
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
++ R +P ITFT L+ GHI D + HM + C PN+ T ++ +
Sbjct: 833 HEMLC-RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 891
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
A EL E + L+P+ +TY+S++ + E +
Sbjct: 892 EGDLDSANELLHEMWKIG-------------LQPNIFTYNSIVNGLCKSGNIEEAVKLVG 938
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
+G D + L+ ++G+ + +L G P + F ++ +
Sbjct: 939 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998
Query: 622 NYEKAVALINAM 633
E L+N M
Sbjct: 999 MLEDGEKLLNWM 1010
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 159/405 (39%), Gaps = 31/405 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ + + GR +EA + L++E PD+ +Y +V + G L ++ KLIE+M
Sbjct: 672 YNIVIHFVCQLGRINEAHHLL-LLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+QK L+P+ Y +++ + F ++ G+ P
Sbjct: 731 KQKG---------------LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y ++ + G +FF +M LTY ++ F + G + EA M
Sbjct: 776 VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
RG+ + EL C G +DA V + S P +T+T LI G
Sbjct: 836 LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCS-PNVVTYTTLIDGLCKEGD 894
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+D + M K +PNI T N+++ ++ +A +L E +
Sbjct: 895 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-------------E 941
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
A L D TY+++++A + + + + + M G Q L+ G
Sbjct: 942 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1001
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
E + +L G P+ F ++ Q +++N + A A+ M
Sbjct: 1002 DGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMC 1046
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/360 (18%), Positives = 138/360 (38%), Gaps = 21/360 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
VF++ + G+ + A+Y + + + Q G+ + H M G ++Y ++ +
Sbjct: 656 VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G++++ + M+Q+G+ + Y + LC + +A ++ + P
Sbjct: 716 RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIG-QGILPDT 774
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR-NDMFSKAKELFE 513
I +T L+ G I F M P++ T A++ + + DM K E
Sbjct: 775 IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
R L+PD T++ ++ A + V+ M +GC +
Sbjct: 835 MLCRG--------------LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVV 880
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS-NYEKAVALINA 632
+ L+ + G + + G P+ +F ++ + +S N E+AV L+
Sbjct: 881 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN-IFTYNSIVNGLCKSGNIEEAVKLVGE 939
Query: 633 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA--LHAL 690
A + +T L ++ DK +++L + + +T + L LH +
Sbjct: 940 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM 999
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 16/192 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K+G +A I ML L P I ++ + G+L++ KL+ M
Sbjct: 952 YTTLMDAYCKSGEMDKAQEILTEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K + P+ +N ++ + K ++K + G++P
Sbjct: 1011 LAKG---------------IAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ + F++M G ++ TY VL++ F++ K EA M
Sbjct: 1056 TYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115
Query: 411 EQRGVVGTASVY 422
+ G+ ++
Sbjct: 1116 RRDGLAADKEIF 1127
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 159/394 (40%), Gaps = 30/394 (7%)
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
NL P Y+S+ Q G ++ + L+ +M ++ + +L +Y
Sbjct: 231 NLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEG---------------FQGNLGLYT 275
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
VLN + F +L+ GL P+AATYG +++ ++G + +M K
Sbjct: 276 TVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKH 335
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G + + Y +++ + G A +M G+ Y L C GR A
Sbjct: 336 GVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKA 395
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK 497
+ V+E I++ R +E T+T ++ + GGHI + +F +K P + + N++L
Sbjct: 396 LGVLENIQANRLLPTIE-TYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLS 454
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
++ A+ + +E AN + P+E +Y+++ E A A E
Sbjct: 455 GLAKARQMENARLMLDEML-ANG------------VVPNERSYTALTEGYARAGDVEKAF 501
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+++ M +D + LL ++G F + +AG + + + ML
Sbjct: 502 GMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGW 561
Query: 618 IVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+ KA L+ M FH+ +T ++
Sbjct: 562 ARKGELSKARDLLKDMQKHGFHLDTICYTSFIKA 595
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/343 (17%), Positives = 132/343 (38%), Gaps = 15/343 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P++ +Y ++++A + +G +++ G++ + A + + +G +
Sbjct: 162 IKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAE 221
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+F K G + Y +V+A+ + G + A + ME+ G G +Y +
Sbjct: 222 HWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGF 281
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ + ++K+ S P T+ ++ G++ + I + M H PN
Sbjct: 282 AEIRDEEKCLSFFHRLKACGLS-PTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPN 340
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
++ Y+R F+ A +++E+ A LKPD TY+ ++ A
Sbjct: 341 KMIYAMIMDGYARGGDFTAAFKVWEDMVSAG-------------LKPDIVTYNILVHAFC 387
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A + + V + + + + +L + G FD + AG P +
Sbjct: 388 KAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVV 447
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+ +L E A +++ M ER +T L E
Sbjct: 448 SYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEG 490
>gi|357503345|ref|XP_003621961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496976|gb|AES78179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 178/428 (41%), Gaps = 42/428 (9%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
+N S + + LL+ G+ + D++ + F L+ L K
Sbjct: 66 INLSTININPNPFINLLRIFSRSGNHELLIKTCDYMVEFHGFQISSKTFASNLLMESLFK 125
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
A +P A +IF L +IA +H + +K +++ + R+R P+
Sbjct: 126 ASQPKNAFKIFGETRSPNFLTFNIALFH--LSNFNDIVNVKYVLREMLRLRYCPNAS--- 180
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
++AVLNA + ++ V+ + + G++ S + + +
Sbjct: 181 ---------------TFSAVLNAFCKMNAFRQVYQILGLMIGLGIELSVNVWTVLIHHFC 225
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ GK D+ + F KM +S + ++TY L++A E + A+ + M G+V
Sbjct: 226 KLGKLDVADDLFDKMIQSCCSPNSVTYTPLIKAVMESDDVTLALRLEQKMNSVGIVPDLV 285
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y L CL +G ++A+ V E+ ++ KP + TFT L+ + D + QH
Sbjct: 286 FYNMLIDCLSKSGMHEEAIRVFEQ----KNFKPDKYTFTSLLSAICRSEQFDLLPKLVQH 341
Query: 481 MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
K H ++ NA+L Y + S+A EL+E R S G+ KPD+YT+
Sbjct: 342 CK-HISRDLVFCNALLISYVKAGYSSRALELYE---RMISEGF----------KPDKYTF 387
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ +L A ++ + V++ + + D H + E +AG+ E A D +
Sbjct: 388 AGLLSALCAENRNDEAVKVWRAVTMDHTD-DVHIHTVISNELKKAGQ---YEQASDVFIS 443
Query: 601 AGEIPHPL 608
+PL
Sbjct: 444 EAVKKYPL 451
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 159/364 (43%), Gaps = 37/364 (10%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR------F 229
+ ++ + + GL T + L G WR+A+S+ D V+ ++ + +R
Sbjct: 5 EVLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLRPDTV 64
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ ++ K G A+ +++ M E + P+ + ++ + G + + ++ ER
Sbjct: 65 TFSTAISACAKGGEWQRAMNMYHEM-EAQGIEPNEFTFAALITACEKGGQVSKAFEVFER 123
Query: 290 MR------------------------QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
M+ Q+ K ++ M K ++P+L Y+A ++AC
Sbjct: 124 MQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKG----IQPNLQAYSAAISACE 179
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ + + + +++ +KP Y M ++G ++ F+KM + G +
Sbjct: 180 KAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVV 239
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
Y L++A+ G+ + A+ + ME+ GV Y E G W+ ++ ++E++
Sbjct: 240 AYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERM 299
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
K+ + +P + + +I + GG D +++ Q + +D +PNI T ++K N
Sbjct: 300 KADKL-RPDAVAYNFVISALSRGGQWDAGLTLLQMLEEDEAQPNISTYCTVIKACGDNGQ 358
Query: 505 FSKA 508
+ KA
Sbjct: 359 WEKA 362
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/334 (18%), Positives = 139/334 (41%), Gaps = 21/334 (6%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E L P +Y++ L + G +E + + + + + ++R K R L PD
Sbjct: 10 IEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQ-TERNKVAARS-----LRPDT 63
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V ++ ++AC +W+ ++ ++ G++P+ T+ + + G+ E F +
Sbjct: 64 VTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFER 123
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G T+ + + + G A+ + M +G+ Y
Sbjct: 124 MQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKAAE 183
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVN 493
+ A+ ++E++ + KP I ++ ++ + G + IFQ MK + P++ +
Sbjct: 184 ARPALGLLERMTN-EKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVVAYS 242
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+++ Y R +S+A E+F+ +A ++P+ Y+ + A A A +W
Sbjct: 243 TLIQAYQRAGEWSRALEVFQLMEKAG-------------VRPNVIAYTEAIAACAKAGEW 289
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ + M + D + +++ SR G+
Sbjct: 290 RRSLGLLERMKADKLRPDAVAYNFVISALSRGGQ 323
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 106/236 (44%), Gaps = 19/236 (8%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G W++A+ +L+ + + +L++ Y+ ++ KA AL + M + + PD
Sbjct: 147 GDWQRALKLLEEMIAKGIQPNLQA---YSAAISACEKAAEARPALGLLERMTNE-KIKPD 202
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
I Y +V G+ GL + ++ ++M+++ L PD+V Y+ ++ A
Sbjct: 203 IIVYSAVMAACGKAGLWEPAARIFQKMKREG---------------LTPDVVAYSTLIQA 247
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
+ +W VF+ + K+G++P+ Y A+ ++G++ +M
Sbjct: 248 YQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMKADKLRPD 307
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
A+ Y ++ A G+ + + ++ +E+ S Y + +NG+W+ A+
Sbjct: 308 AVAYNFVISALSRGGQWDAGLTLLQMLEEDEAQPNISTYCTVIKACGDNGQWEKAL 363
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 124/322 (38%), Gaps = 52/322 (16%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V K + K GL P+ +Y AM + ++G++ F + E KV R+
Sbjct: 6 VLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTE-----RNKVAARSLR 60
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC-NNGRWQDAMLVVEKIKSLRHSKPL 454
+ +V + A C G WQ AM + ++++ + +P
Sbjct: 61 PD----------------------TVTFSTAISACAKGGEWQRAMNMYHEMEA-QGIEPN 97
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
E TF LI + GG + +F+ M+ N+ T A + + + +A +L E
Sbjct: 98 EFTFAALITACEKGGQVSKAFEVFERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLE 157
Query: 514 ETT----RANSSGYTFL------SGDGAP------------LKPDEYTYSSMLEASATAH 551
E + N Y+ + + P +KPD YS+++ A A
Sbjct: 158 EMIAKGIQPNLQAYSAAISACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAG 217
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
WE +++ M G D ++ L+ RAG+ F + +AG P+ + +T
Sbjct: 218 LWEPAARIFQKMKREGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYT 277
Query: 612 EMLIQAIVQSNYEKAVALINAM 633
E + + +++ L+ M
Sbjct: 278 EAIAACAKAGEWRRSLGLLERM 299
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 111/512 (21%), Positives = 203/512 (39%), Gaps = 89/512 (17%)
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
L F + QMLK+ G++ +++ +L+ + D+ + TKL+
Sbjct: 81 LGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV---ILCTKLIKGFFTLRNVP 137
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+A+R+ + LE PD+ AY+++ ++ + + ++++RMR K
Sbjct: 138 KAVRVMEI-LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD----------- 184
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
PD V YN ++ + + V QL +P+ TY + +E + G
Sbjct: 185 ----FSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGV 240
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
D + +M G TY ++R +EG ++ A +RN+E +G Y L
Sbjct: 241 DEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNIL 300
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--- 482
L N G+W++ ++ K+ S P +T++ LI + G I++ +++ + MK
Sbjct: 301 LRALLNQGKWEEGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359
Query: 483 ---------------------------------DHCEPNIGTVNAMLKVYSRNDMFSKAK 509
D C P+I N +L +N +A
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419
Query: 510 ELF----EETTRANSSGYTFL------SGD------------GAPLKPDEYTYSSMLEAS 547
E+F E NSS Y + SGD + PDE TY+SM+
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCL 479
Query: 548 ATAHQWE-YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGE 603
+ FE + + + C+ + + +V K H +E A DS++ G
Sbjct: 480 CREGMVDKAFELL---VDMRSCEFHPSVVTYNIVLLGFC-KAHRIEDAIDVLDSMVGNGC 535
Query: 604 IPHPLFFTEMLIQAIVQSNYE-KAVALINAMA 634
P+ +T +LI+ I + Y +A+ L N +
Sbjct: 536 RPNETTYT-VLIEGIGFAGYRAEAMELANDLV 566
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 165/384 (42%), Gaps = 34/384 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKG GS + A VLD + D + Y+ L+ +AGR E+ RI +
Sbjct: 298 LLKGYVKIGSLKNAEQVLDEMSQCGVAPDEAT---YSLLVDAYTRAGR-WESARILLKEM 353
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P + + G QK ++ MH + PD
Sbjct: 354 EADGVKPSSYVFSRILAGFRDRGEW-----------QKAFAVLREMHASG----VRPDRH 398
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +++ + F ++R+ G++P T+ ++ + G++D E F +M
Sbjct: 399 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEM 458
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+S +G TY +++ EE + A + M+++G+V Y L +GR+
Sbjct: 459 RESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRF 518
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
++A+ +E +K+ KP + L+ + G D +++ + M+ D E + +N+
Sbjct: 519 KEAVDCIEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNS 577
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + + ++A + + F+ +G L+PD TY+++++A Q+E
Sbjct: 578 LINAFGEDRRIAEAFSVLQ-----------FMKENG--LRPDVITYTTLMKALIRVEQFE 624
Query: 555 YFEYVYKGMALSGCQLDQTKHAWL 578
+Y+ M SGC D+ A L
Sbjct: 625 KVPVIYEEMITSGCAPDRKARAML 648
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 25/322 (7%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL ++ + D
Sbjct: 340 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPD--- 396
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ F+ M E+ + PD+ ++++ + G ++L
Sbjct: 397 RHFYNVMIDTFGKYNCLGHAMDAFDRMREE-GIEPDVVTWNTLIDAHCKGGRHDRAIELF 455
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ MR+ P+ YN ++N +W+GV + ++++ GL P
Sbjct: 456 DEMRESNC------------PL---GTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVP 500
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY ++V +SG++ + M G Y LV A+ + G + A+ V
Sbjct: 501 NIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVV 560
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ M G+ + V L + R +A V++ +K +P IT+T L+ + +
Sbjct: 561 KAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKE-NGLRPDVITYTTLMKALIR 619
Query: 468 GGHIDDCISIFQHM-KDHCEPN 488
+ I++ M C P+
Sbjct: 620 VEQFEKVPVIYEEMITSGCAPD 641
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 110/296 (37%), Gaps = 50/296 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P YNA+L V K V ++ + G+ P ATY L ++ ++G+++
Sbjct: 288 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 347
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
++M G + + ++ F + G+ +A A +R M GV Y +
Sbjct: 348 ILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 407
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE-- 486
AM ++++ +P +T+ LI + GG D I +F M++ +C
Sbjct: 408 GKYNCLGHAMDAFDRMRE-EGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLG 466
Query: 487 ---------------------------------PNIGTVNAMLKVYSRNDMFSKAKELFE 513
PNI T ++ VY R+ F +A + E
Sbjct: 467 TTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIE 526
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+ DG LKP Y +++ A A ++ V K M G +
Sbjct: 527 A-----------MKADG--LKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLE 569
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/327 (18%), Positives = 131/327 (40%), Gaps = 18/327 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
LEPD +++ +++A + + + GL P + + + + +
Sbjct: 217 LEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 276
Query: 370 EFFRKMAKSGEAIGALT--YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
F + +GE I T Y L++ + + G + A + M Q GV + Y L
Sbjct: 277 ALFLEFFLAGE-IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVD 335
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
GRW+ A ++++++++ KP F+ ++ D G ++ + M
Sbjct: 336 AYTRAGRWESARILLKEMEA-DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVR 394
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+ N M+ + + + A + F+ R G ++PD T++++++A
Sbjct: 395 PDRHFYNVMIDTFGKYNCLGHAMDAFD---RMREEG----------IEPDVVTWNTLIDA 441
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ + ++ M S C L T + ++ + +E + E G +P+
Sbjct: 442 HCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAM 633
+ +T ++ +++AV I AM
Sbjct: 502 IITYTTLVDVYGRSGRFKEAVDCIEAM 528
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 165/384 (42%), Gaps = 34/384 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKG GS + A VLD + D + Y+ L+ +AGR E+ RI +
Sbjct: 298 LLKGYVKIGSLKNAEQVLDEMSQCGVAPDEAT---YSLLVDAYTRAGR-WESARILLKEM 353
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P + + G QK ++ MH + PD
Sbjct: 354 EADGVKPSSYVFSRILAGFRDRGEW-----------QKAFAVLREMHASG----VRPDRH 398
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +++ + F ++R+ G++P T+ ++ + G++D E F +M
Sbjct: 399 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEM 458
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+S +G TY +++ EE + A + M+++G+V Y L +GR+
Sbjct: 459 RESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRF 518
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
++A+ +E +K+ KP + L+ + G D +++ + M+ D E + +N+
Sbjct: 519 KEAVDCIEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNS 577
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + + ++A + + F+ +G L+PD TY+++++A Q+E
Sbjct: 578 LINAFGEDRRIAEAFSVLQ-----------FMKENG--LRPDVITYTTLMKALIRVEQFE 624
Query: 555 YFEYVYKGMALSGCQLDQTKHAWL 578
+Y+ M SGC D+ A L
Sbjct: 625 KVPVIYEEMITSGCAPDRKARAML 648
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 25/322 (7%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL ++ + D
Sbjct: 340 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPD--- 396
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ F+ M E+ + PD+ ++++ + G ++L
Sbjct: 397 RHFYNVMIDTFGKYNCLGHAMDAFDRMREE-GIEPDVVTWNTLIDAHCKGGRHDRAIELF 455
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ MR+ P+ YN ++N +W+GV + ++++ GL P
Sbjct: 456 DEMRESNC------------PL---GTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVP 500
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY ++V +SG++ + M G Y LV A+ + G + A+ V
Sbjct: 501 NIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVV 560
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ M G+ + V L + R +A V++ +K +P IT+T L+ + +
Sbjct: 561 KAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKE-NGLRPDVITYTTLMKALIR 619
Query: 468 GGHIDDCISIFQHM-KDHCEPN 488
+ I++ M C P+
Sbjct: 620 VEQFEKVPVIYEEMITSGCAPD 641
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 110/296 (37%), Gaps = 50/296 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P YNA+L V K V ++ + G+ P ATY L ++ ++G+++
Sbjct: 288 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 347
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
++M G + + ++ F + G+ +A A +R M GV Y +
Sbjct: 348 ILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 407
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE-- 486
AM ++++ +P +T+ LI + GG D I +F M++ +C
Sbjct: 408 GKYNCLGHAMDAFDRMRE-EGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLG 466
Query: 487 ---------------------------------PNIGTVNAMLKVYSRNDMFSKAKELFE 513
PNI T ++ VY R+ F +A + E
Sbjct: 467 TTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIE 526
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+ DG LKP Y +++ A A ++ V K M G +
Sbjct: 527 A-----------MKADG--LKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLE 569
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/390 (18%), Positives = 154/390 (39%), Gaps = 33/390 (8%)
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP-SKRIKNMHRKNW 306
LR+ L+ E L PD+A+Y L+ L+ R P + + +
Sbjct: 168 LRLLGLLREHSFL-PDLASY-------------SHLLALLLNTRDPPEAALLDRLLGDLR 213
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+ LEPD +++ +++A + + + GL P + + + + +
Sbjct: 214 ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 273
Query: 367 LVHEFFRKMAKSGEAIGALT--YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
F + +GE I T Y L++ + + G + A + M Q GV + Y
Sbjct: 274 EAEALFLEFFLAGE-IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSL 332
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KD 483
L GRW+ A ++++++++ KP F+ ++ D G ++ + M
Sbjct: 333 LVDAYTRAGRWESARILLKEMEA-DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS 391
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
P+ N M+ + + + A + F+ R G ++PD T++++
Sbjct: 392 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFD---RMREEG----------IEPDVVTWNTL 438
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
++A + + ++ M S C L T + ++ + +E + E G
Sbjct: 439 IDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGL 498
Query: 604 IPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+P+ + +T ++ +++AV I AM
Sbjct: 499 VPNIITYTTLVDVYGRSGRFKEAVDCIEAM 528
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/482 (21%), Positives = 199/482 (41%), Gaps = 54/482 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL KG ++++ D V + D S Y LL L K G A+++ M+
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVS---YGTLLNGLCKIGETRCAVKLLR-MI 141
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
ED + P++ Y+++ L + L+ E L M + + PD +
Sbjct: 142 EDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG---------------IFPDAI 186
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++ Q G F + ++ + P Y + + + + G M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G G +TY L+ + G++ A M Q GV Y + LC R
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNA 494
+AM ++ ++ ++ P +T+ LI G I +++ M +P ++ T +
Sbjct: 307 DEAMNLLREMLH-KNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+L +N KA LF + ++P YTY+++++ + +
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERG-------------IQPTMYTYTALIDGLCKGGRLK 412
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL-------EAGEIPHP 607
+ +++ + + GC +D + ++ +G C E FD L + G IP+
Sbjct: 413 NAQELFQHLLVKGCCIDVWTYTVMI-----SGLCK--EGMFDEALAIKSKMEDNGCIPNA 465
Query: 608 LFFTEMLIQAIVQSN-YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLN 666
+ F E++I+++ + + +KA L++ M + + + ++F NE+ DK EKLL+
Sbjct: 466 VTF-EIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKVADVFVQNEN----DKAEKLLH 520
Query: 667 AL 668
+
Sbjct: 521 EM 522
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 157/389 (40%), Gaps = 63/389 (16%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
++ R ++D L + ++ + + M+ G+ L+ G G
Sbjct: 143 DRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLM 202
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A S+LD + LK+ ++Y L+ L K G EA + +M ++ + P + Y
Sbjct: 203 GAFSLLDEMI-LKNIN--PGVYIYNILINALCKEGNVKEAKNLLAVMTKE-GIKPGVVTY 258
Query: 268 HSVA---VTLGQVGLLKELVKLIERMRQKPS--------------KRIK---NMHRKNWD 307
++ +G+V K++ + +M P+ KR+ N+ R+
Sbjct: 259 STLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH 318
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
+ PD V YN++++ L KSG SA +L
Sbjct: 319 KNMVPDTVTYNSLIDG----------------LCKSGRITSA---------------LNL 347
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
++E M G+ +TY L+ A + +++A A M++RG+ T Y L
Sbjct: 348 MNE----MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 403
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDH-C 485
LC GR ++A + + + L +++ T+T +I G D+ ++I M+D+ C
Sbjct: 404 GLCKGGRLKNAQELFQHL--LVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 461
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
PN T +++ D KA++L E
Sbjct: 462 IPNAVTFEIIIRSLFEKDENDKAEKLLHE 490
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/342 (16%), Positives = 126/342 (36%), Gaps = 15/342 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD + N ++ + K ++ G + +YG + + + G+ +
Sbjct: 77 QPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVK 136
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
R + + Y ++ ++ +NEA M+ RG+ A Y L C
Sbjct: 137 LLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFC 196
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
G+ A +++++ L++ P + LI + G++ + ++ M K+ +P +
Sbjct: 197 LLGQLMGAFSLLDEM-ILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGV 255
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T + ++ Y AK++F + + P+ Y+Y+ M+
Sbjct: 256 VTYSTLMDGYCLVGEVQNAKQIFHAMVQMG-------------VNPNVYSYNIMINGLCK 302
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + + + M D + L+ ++G+ + + + G+ +
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+T +L N +KA AL M T +T L +
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 404
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 145/342 (42%), Gaps = 17/342 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD + + +++ ++ + ++ + G +P+ TYG+ + + + G DL
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM + + + ++ + + +++A+ + ME +G+ Y L CLC+
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 432 NGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
GRW DA L+ + I+ + P +TF LI + + G + + M K +P+I
Sbjct: 233 YGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N+++ + +D KAK++FE + PD TY+++++
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-------------PDLDTYNTLIKGFCK 337
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + E +++ M+ G D + L+ G C + F ++ G P +
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
++ +L EKA+ + + M + + +T + E
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 137/368 (37%), Gaps = 70/368 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+T L+ L + EA+ + + M++ C P++ Y V L + G + L+
Sbjct: 116 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDIDLAFNLL 173
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+M +E D+V++N ++++ +FK++ G++P
Sbjct: 174 NKMEAAK---------------IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + + G++ + M + +T+ L+ AF +EGK EA
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE----------------KIKSLRHS 451
+M +R + Y L C + R A + E IK S
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 452 KPLE------------------ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 492
K +E +T+T LI G D+ +F+ M D P+I T
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ +L N KA E+F+ ++ +K D Y Y++M+E A +
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSE-------------IKLDIYIYTTMIEGMCKAGK 445
Query: 553 ----WEYF 556
W+ F
Sbjct: 446 VDDGWDLF 453
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y L+ R +A ++F M+ +DC +PD+ Y++ L+K K
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDC--FPDLDTYNT---------LIKGFCK-- 337
Query: 288 ERMRQKPSKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
SKR+++ + R+ L D V Y ++ VFKQ+ G
Sbjct: 338 -------SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ P TY + ++ + +GK + E F M KS + Y ++ + GK+++
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
++ +GV Y + LC+ Q+A +++K+K
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
PS + + + + K+DLV KM + G + TY +L+ F +I+ A+A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M + G + L C+ R DA+ +V+++ + + +P ITFT LI
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY-RPDTITFTTLIHGLF 126
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGT----VNAMLK 497
+ +++ M + C+PN+ T VN + K
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L G A ++F M+ D + PDI Y + L G L++ +++ + M
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 291 RQKPSK--------RIKNMHR-----KNWDPV-------LEPDLVVYNAVLNACVPSHQW 330
++ K I+ M + WD ++P++V YN +++
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ + + K++++ G P + TY + L+ G E R+M +S +G + L
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM-RSCRFVGDASTIGL 540
Query: 391 VRAFWEEGKINEA 403
V +G+++++
Sbjct: 541 VANMLHDGRLDKS 553
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 143/308 (46%), Gaps = 23/308 (7%)
Query: 214 DWVYGLKDKRD----LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
+++Y ++ + + L+ RF + L+ G+AG E++++F M + + P + ++S
Sbjct: 138 NFLYSIEKRSNGEVKLEDRF-FNSLIRSYGEAGLFKESVKLFENM-KLIGVSPGVVTFNS 195
Query: 270 VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
V L+ L++R R +K + + K + ++PD YN ++ +
Sbjct: 196 V------------LLVLLKRGRTNMAKEVYDEMLKTYG--VKPDTYTYNILIRGFCKNSM 241
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG--ALTY 387
F+ FK++ P TY ++ + ++GK + H M+K + + +TY
Sbjct: 242 VDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTY 301
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+R + + +++EA+ + M RG+ Y L LC +W ++E++K
Sbjct: 302 TTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKG 361
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFS 506
S P TF LI S G++D+ +F++MK + + + +++ + +
Sbjct: 362 DGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYG 421
Query: 507 KAKELFEE 514
KA+ LF+E
Sbjct: 422 KAEMLFDE 429
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 31/278 (11%)
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV---YGLKDKRDLKSRF 229
+N K + + G++ +L LLK +G A V D + YG+K +
Sbjct: 179 ENMKLIGV--SPGVVTFNSVLLVLLK----RGRTNMAKEVYDEMLKTYGVK-----PDTY 227
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y L+ K E F M DC+ PD+ Y+++ L + G +K L+
Sbjct: 228 TYNILIRGFCKNSMVDEGFYFFKEMTSFDCD--PDVVTYNTLVDGLCRAGKIKVAHNLVN 285
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M SK+ K+ L PD+V Y ++ + + +++ GLKP+
Sbjct: 286 GM----SKKCKD---------LSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPN 332
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-GALTYKVLVRAFWEEGKINEAVAAV 407
TY ++ + ++ K+D + E +M G +I A T+ L+ + G ++EA
Sbjct: 333 IVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVF 392
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
NM++ V ++ Y L LC G + A ++ +++
Sbjct: 393 ENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDEL 430
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 103/262 (39%), Gaps = 28/262 (10%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK--SGEA-IGALTYKVL 390
F F + + G + TY + +E++ + ++ F + K +GE + + L
Sbjct: 102 FLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSL 161
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+R++ E G E+V NM+ GV + + L GR A V +++
Sbjct: 162 IRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYG 221
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR-------- 501
KP T+ LI +D+ F+ M C+P++ T N ++ R
Sbjct: 222 VKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAH 281
Query: 502 ---NDMFSKAKELFEETTRANS--SGYT-----------FLSGDGAPLKPDEYTYSSMLE 545
N M K K+L + + GY +G LKP+ TY+++++
Sbjct: 282 NLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIK 341
Query: 546 ASATAHQWEYFEYVYKGMALSG 567
A +W+ + + + M G
Sbjct: 342 GLCEAQKWDKMKEILEQMKGDG 363
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y L+ L +AG+ A + N M + C +L PD+ Y ++ + + E + ++E
Sbjct: 263 TYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILE 322
Query: 289 RMRQ---KPSKRIKNMHRKN------WDPVLE------------PDLVVYNAVLNACVPS 327
M KP+ N K WD + E PD +N ++N+ +
Sbjct: 323 EMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCA 382
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD----LVHEFFRK---MAKSGE 380
F VF+ ++K + +A+Y + + + Q G Y L E F K ++ G
Sbjct: 383 GNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGP 442
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
A +YK + + E GK +A +R + +RG
Sbjct: 443 KPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGT 477
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 458 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
F LI S + G + + +F++MK P + T N++L V + + AKE+++E
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
+ +KPD YTY+ ++ + Y +K M C D +
Sbjct: 218 KTYG------------VKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYN 265
Query: 577 WLLVEASRAGK 587
L+ RAGK
Sbjct: 266 TLVDGLCRAGK 276
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/518 (22%), Positives = 202/518 (38%), Gaps = 101/518 (19%)
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL------LAILG 239
L F + QMLK+ G++ +++ +L+ + D+ + TKL L +
Sbjct: 85 LGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV---ILCTKLIKGFFTLRNIP 141
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KA R E L F PD+ AY+++ ++ + + ++++RMR K
Sbjct: 142 KAVRVMEILEKFG--------QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD----- 188
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
PD V YN ++ + + V QL +P+ TY + +E
Sbjct: 189 ----------FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ G D + +M G TY ++R +EG ++ A VRN+E +G
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y L L N G+W++ ++ K+ S P +T++ LI + G I++ +++ +
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 480 HMK------------------------------------DHCEPNIGTVNAMLKVYSRND 503
MK D C P+I N +L +N
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 504 MFSKAKELF----EETTRANSSGYTFL------SGD------------GAPLKPDEYTYS 541
+A E+F E NSS Y + SGD + PDE TY+
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 542 SMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDS 597
SM+ E FE + + + C+ + + +V K H +E A +S
Sbjct: 478 SMISCLCREGMVDEAFELL---VDMRSCEFHPSVVTYNIVLLGFC-KAHRIEDAINVLES 533
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSNYE-KAVALINAMA 634
++ G P+ +T +LI+ I + Y +A+ L N +
Sbjct: 534 MVGNGCRPNETTYT-VLIEGIGFAGYRAEAMELANDLV 570
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 165/401 (41%), Gaps = 30/401 (7%)
Query: 133 QLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQ 192
+LG +F W +R +++D L++ + WK + + S +
Sbjct: 78 ELGFRFFI----WTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPT 133
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
L+ G +A+ + K D+ F Y +L ++ + AL ++N
Sbjct: 134 FSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDV---FTYNSILHVMVQKEVFLLALAVYN 190
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-----------------PS 295
ML+ N P+ A + + L + G + +K+ + M QK +
Sbjct: 191 QMLK-LNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQA 249
Query: 296 KRIKNMHRK-NWDPV--LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
KR ++HR N V PD + NA+L+ Q F + + K G Y
Sbjct: 250 KRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGY 309
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++ + ++ +YD V E+ RKM K+G + Y +L+R F E G ++ A+ + +M Q
Sbjct: 310 SSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQ 369
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
RG+ Y L C+ G A + +I S P T+T LI G +D
Sbjct: 370 RGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI-SKNDCFPTSCTYTILICGMCRNGLLD 428
Query: 473 DCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ IF M++ C P+I T NA++ + +A+ LF
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF 469
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 146/371 (39%), Gaps = 30/371 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ E M + M Q GL L+KG D G +A S+ +
Sbjct: 346 ILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI--- 402
Query: 220 KDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
K D + YT L+ + + G EA +IFN M E+ P I ++++ L + G
Sbjct: 403 -SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM-ENLGCSPSIMTFNALIDGLCKAG 460
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L+E L +M + + + D V++ N + + F V
Sbjct: 461 ELEEARHLFYKMEIGKNPSLFLRLSQGADRVMD--------TANGFHRVDREEDAFRVLD 512
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
Q+ K+G PS+A Y M + GK + + K +S + T K L +E+G
Sbjct: 513 QMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLK-LAEEHFEKG 571
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM---LVVEKIKSLRHSKPLE 455
++ +AV + M + + Y LC R ++A+ LV+++ + +
Sbjct: 572 ELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCV 631
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH---CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ GL G+++ + IF + + P I N +L+ D K K
Sbjct: 632 MLINGLC----KDGNLEMAVDIFLYTLEKGFMLMPRI--CNQLLRSLILQD---KMKHAL 682
Query: 513 EETTRANSSGY 523
+ R NS+GY
Sbjct: 683 DLLNRMNSAGY 693
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 146/354 (41%), Gaps = 21/354 (5%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D L + MT + M +G++ L+ GL G ++A+ + G
Sbjct: 1090 MIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 1149
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
D+ + Y L+ L +AG E NLM+ D PD + + L + G
Sbjct: 1150 GISADV---YTYNSLIHGLSRAGLWKEVTWFLNLMV-DRGFSPDAFTFTILIDGLCKEGK 1205
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ E +++E MR K EPD++ YN ++N Q + +F+
Sbjct: 1206 VGEAQQILELMRHKGK---------------EPDILTYNTLMNGLCLVGQLEDATKLFES 1250
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
L G+K + +Y + + + K D FF +M G +TY L+ A + G+
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGR 1310
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ A M+ G S Y L LC NG ++AM + + IK H +E+ F+
Sbjct: 1311 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEV-FS 1369
Query: 460 GLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
L+ G +++ F + K+ EP+ N ++ M S+A +L
Sbjct: 1370 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 1423
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 161/422 (38%), Gaps = 54/422 (12%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+ Y +++A +F ++ +G+ P Y M+ + + G+ EFF
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
++M G + TY L+ G E + M RG A + L LC
Sbjct: 1144 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 1203
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
G+ +A ++E ++ + +P +T+ L+ G ++D +F+ + D + N+ +
Sbjct: 1204 GKVGEAQQILELMRH-KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFS 1262
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ Y ++ +A FEE LKP TY++++ A +
Sbjct: 1263 YNILINGYCKDQKIDEAFRFFEEMRPKG-------------LKPSTVTYNTLIGALCQSG 1309
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ + ++ M G L + + LL + G LE A D + H
Sbjct: 1310 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH---LEEAMDLFQSIKKTEH----- 1361
Query: 612 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK-------L 664
+ N E L++ M A E W + D IS++ LE L
Sbjct: 1362 --------KPNIEVFSILLDGMCRA--GKLEEAWKQF-----DEISKNGLEPDTIAYNIL 1406
Query: 665 LNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHEAFDV 724
+N LCN LS A+ L + E++ L S F ++ + IHEA +
Sbjct: 1407 INGLCNKGM---------LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 1457
Query: 725 KE 726
E
Sbjct: 1458 LE 1459
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 124/324 (38%), Gaps = 16/324 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +N +L + + VF +++++ G++P T + +
Sbjct: 944 PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F K G A+T LV+ W E I +AV M ++G++G A Y L LC
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+ A+ + EK+K + K T+ +I + G + + +F M P++
Sbjct: 1064 ARKTGLAIKLHEKMKG--NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVV 1121
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
++++ R +A E F+E +G + D YTY+S++ + A
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEM-------------EGRGISADVYTYNSLIHGLSRA 1168
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
W+ + M G D L+ + GK + + + G+ P L +
Sbjct: 1169 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTY 1228
Query: 611 TEMLIQAIVQSNYEKAVALINAMA 634
++ + E A L ++A
Sbjct: 1229 NTLMNGLCLVGQLEDATKLFESLA 1252
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 61/328 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G W++ + W L R F +T L+ L K G+ EA +I LM
Sbjct: 1161 LIHGLSRAGLWKE----VTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 1216
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK-----------------R 297
PDI Y+++ L VG L++ KL E + + K +
Sbjct: 1217 RHKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 1275
Query: 298 IKNMHR--KNWDPV-LEPDLVVYNAVLNACVPS------------HQWKGVFW------- 335
I R + P L+P V YN ++ A S Q G F
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 1335
Query: 336 ----------------VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+F+ ++K+ KP+ + + ++ M ++GK + + F +++K+G
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ Y +L+ +G ++EAV + ME++G + + + + L +A+
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMD 467
++E++++ S +T L ++S D
Sbjct: 1456 QLLEEMRNRNFSPDEAVTSMLLCLASFD 1483
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y L+ L ++GR A ++F + ++ C + ++ Y + L + G L+E + L
Sbjct: 1294 STVTYNTLIGALCQSGRVRTAQKLF-VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDL 1352
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +++ K P++ V++ +L+ + + + + F ++ K+GL+
Sbjct: 1353 FQSIKKTEHK---------------PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P Y + + + G + +M + G ++T+ V+++ +E +I+EA+
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 1457
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ M R +V L C + +W A++
Sbjct: 1458 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALV 1491
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 6/211 (2%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P +P + +YN +L +C+ + + V W++K + G+ P T+ L + + S D
Sbjct: 106 PENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDA 165
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
E F +M + G T+ +LVR + + G ++ + + +ME GV+ VY +
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVS 225
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK----- 482
C GR D+ +VEK++ P +TF I + G + D IF M+
Sbjct: 226 SFCREGRNDDSEKLVEKMRE-EGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
PN T N MLK + + + AK LFE
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 162/410 (39%), Gaps = 41/410 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L D A + D + +K + F + L+ KAG + L + N M
Sbjct: 153 LIRALCDSSCVDAARELFDE---MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSM- 208
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P+ Y+++ + + G + KL+E+MR++ L PD+V
Sbjct: 209 ESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEG---------------LVPDIV 253
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKS---GL-KPSAATYGLAMEVMLQSGKYDLVHEF 371
+N+ ++A + +F + GL +P++ TY L ++ + G +
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F + ++ + + +Y + ++ GK EA ++ M +G+ + Y L LC
Sbjct: 314 FESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCK 373
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIG 490
G DA +V +K P +T+ L+ G +D S+ Q M+++C PN
Sbjct: 374 LGMLSDAKTIVGLMKR-NGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF-----------LSGDGAPLKPDEYT 539
T N +L S+A+EL + N GY L G G K E
Sbjct: 433 TCNILLHSLWNMGRISEAEELLR---KMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 540 YSSMLEASATAHQW--EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ SA Y V + + C D ++ LL +AG+
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGR 539
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 168/433 (38%), Gaps = 60/433 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNL---YPDIAAYHSVAVTLGQVGLLKELVKL 286
+ ++ L K G+ +A RIF+ M D L P+ Y+ + +VGLL++ L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 287 IERMRQ------------------KPSKRIK--NMHRKNWDPVLEPDLVVYNAVLNACVP 326
E +R+ + K I+ + ++ D + P + YN +++
Sbjct: 314 FESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCK 373
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ ++++G+ P A TYG + GK D ++M ++ A T
Sbjct: 374 LGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKI 445
+L+ + W G+I+EA +R M ++G G +V + LC +G A +E +
Sbjct: 434 CNILLHSLWNMGRISEAEELLRKMNEKG-YGLDTVTCNIIVDGLCGSGELDKA---IEIV 489
Query: 446 KSLR-HSKP----LEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYS 500
K +R H L ++ GL+ S+ ++++C P++ T + +L
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSL--------------IENNCLPDLITYSTLLNGLC 535
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ F++AK LF E G L+PD Y+ + + V
Sbjct: 536 KAGRFAEAKTLFAEMM-------------GEKLQPDSLAYNIFIHHFCKQGKISSAFRVL 582
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
K M GC + L++ + + D + E G P+ + +
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEG 642
Query: 621 SNYEKAVALINAM 633
E A L++ M
Sbjct: 643 GKVEDATNLLDEM 655
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 168/431 (38%), Gaps = 62/431 (14%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
L+GL G + +A +VL + DK S + Y L+ L K G +A I LM
Sbjct: 333 LQGLVRHGKFIEAETVLKQMI---DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 257 DCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKRIKN------------- 300
+ + PD Y + ++G+V K L++ + R P+ N
Sbjct: 390 N-GVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRIS 448
Query: 301 ----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG------------ 344
+ RK + D V N +++ S + + K +R G
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Query: 345 -----------LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
P TY + + ++G++ F +M +L Y + +
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHH 568
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
F ++GKI+ A +++ME++G + Y L L + + ++++++ + P
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMRE-KGISP 627
Query: 454 LEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
T+ I +GG ++D ++ + M+ + PN+ + ++ + + F A+E+F
Sbjct: 628 NICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF 687
Query: 513 EETTRAN-------SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
E S + L G LK E +LEA +E ++YK + +
Sbjct: 688 ETAVSICGQKEGLYSLMFNELLAAGQLLKATE-----LLEA-VLDRGFELGTFLYKDLVV 741
Query: 566 SGCQLDQTKHA 576
S C+ D+ + A
Sbjct: 742 SLCKKDELEVA 752
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 101/264 (38%), Gaps = 24/264 (9%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL-----AILGKAGRPHEALR 249
+LL+ + +KG ++ V GL +L K + A LG G + L
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+L+ +C PD+ Y ++ L + G E L M M K
Sbjct: 512 DDSLIENNC--LPDLITYSTLLNGLCKAGRFAEAKTLFAEM----------MGEK----- 554
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-LAMEVMLQSGKYDLV 368
L+PD + YN ++ + F V K + K G S TY L + + +++ ++ +
Sbjct: 555 LQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE-I 613
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
H +M + G + TY ++ E GK+ +A + M Q+ + + L
Sbjct: 614 HGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGA 673
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSK 452
C + A V E S+ K
Sbjct: 674 FCKVPDFDMAQEVFETAVSICGQK 697
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 136/305 (44%), Gaps = 15/305 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD +N +++ ++ + ++ G +P TYG+ + + + G DL
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+KM + G + Y ++ A +N+A+ M+ +G+ Y L CLC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
N GRW DA ++ + R P +TF+ LI + + G + + ++ M K +P+I
Sbjct: 303 NYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++++ + +D +AK +FE +S D P+ TY+++++
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFE----------LMISKD---CFPNVVTYNTLIKGFCK 408
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A + + +++ M+ G + + L+ +A +C + F ++ G +P +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 610 FTEML 614
++ +L
Sbjct: 469 YSILL 473
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 159/413 (38%), Gaps = 66/413 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F + L+ L + R EA+ + + ++++ C PD+ Y V L + G + + L+
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ--PDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
++M Q +EP +V+YN +++A +F ++ G++P
Sbjct: 245 KKMEQGK---------------IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + + G++ M + +T+ L+ AF +EGK+ EA
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAM----LVVEK------------IKSLRHS 451
M +R + Y L C + R +A L++ K IK +
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 452 KPLE------------------ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 492
K ++ +T+T LI D+ +F+ M D P+I T
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ +L N A +FE R+ ++PD YTY+ M+E A +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSK-------------MEPDIYTYNIMIEGMCKAGK 516
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
E ++ ++L G + + + ++ R G + F + E G +P
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 118/266 (44%), Gaps = 27/266 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y+ L+ R EA +F LM+ +DC +P++ Y+++ + + E ++L
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 288 ERMRQKP-----------------SKRIKN----MHRKNWDPVLEPDLVVYNAVLNACVP 326
M Q+ ++ N + D VL PD++ Y+ +L+
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL-PDIMTYSILLDGLCN 478
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + + VF+ L++S ++P TY + +E M ++GK + + F ++ G +T
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y ++ F +G EA A R M++ G + + Y L +G + ++ +++
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Query: 447 SLRHSKPLEITFTGLIISSMDGGHID 472
S R + + GL+ + + G +D
Sbjct: 599 SCRFVG--DASTIGLVTNMLHDGRLD 622
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 17/210 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ +A A +F M+ D + PDI Y + L G ++ + + E +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EPD+ YN ++ + + + + +F L G+KP+
Sbjct: 493 QRSK---------------MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY M + G + FR+M + G + TY L+RA +G + +R M
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAML 440
VG AS L + ++GR + L
Sbjct: 598 RSCRFVGDAST-IGLVTNMLHDGRLDKSFL 626
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 30/244 (12%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F + KS PS + + + + K+DLV +M G + TY +L+ F
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+++ A+A + M + G L C+ R DA+ +V ++ + + +P
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY-QPDS 186
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT----VNAMLKVYSRND------- 503
TF LI + +++ M C+P++ T VN + K R D
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK---RGDIDLALSL 243
Query: 504 --------------MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+++ + N + F D ++P+ TY+S++
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 550 AHQW 553
+W
Sbjct: 304 YGRW 307
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 126/545 (23%), Positives = 210/545 (38%), Gaps = 68/545 (12%)
Query: 102 EFAGDNL--KRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIR 159
EF G L K ++ R LK E+ NWV +D G DY +K WH E+ +A R
Sbjct: 218 EFHGRVLTVKLDDGRRLKAKAEERKNWVYGED---GKDYRSK---WHEERE--GSTKAFR 269
Query: 160 VLVDRLSEREMTAKNWK-----FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
++D E NW+ F RI S F G M+ GD RQ
Sbjct: 270 KVLDTQPE------NWQAVVSAFERIKKPSRREF--GLMVGYYARRGDMHRARQTFE--- 318
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
++ + S VYT L+ EAL M E+ + + Y V
Sbjct: 319 ---SMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEE-GIEMSLVTYSIVVGGF 374
Query: 275 GQVGLLKELVKLIERMRQKPSK--------------------RIKNMHRKNWDPVLEPDL 314
+ G + ++ +++ + R + + R+ + ++ L
Sbjct: 375 AKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPL 434
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+Y+ +++ + VFK+L++ G PS TYG + + + GK E +
Sbjct: 435 DIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKM 494
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G TY +L+ F + A A ++ + G+ +Y + C G
Sbjct: 495 MKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGN 554
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
A+ +V++++ R +P TF +I G + + IF M + C P + T N
Sbjct: 555 MDRAIHMVKEMQKER-CRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFN 613
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-SATAHQ 552
A++ KA E+ +E A S PDE+TY++++ +A
Sbjct: 614 ALVLGLVEKRKMEKAVEILDEMALAGVS-------------PDEHTYTTIMHGYAALGDT 660
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+ FEY K M G QLD + LL ++G+ A + A +IP F
Sbjct: 661 GKAFEYFTK-MRNEGLQLDVFTYEALLKACCKSGRMQ-SALAVTREMNAQKIPRNTFVYN 718
Query: 613 MLIQA 617
+LI
Sbjct: 719 ILIDG 723
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 147/340 (43%), Gaps = 15/340 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P VY ++++A + +++ + G++ S TY + + + G +
Sbjct: 325 IDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAAD 384
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+F+K + + A Y ++ A+ + ++ A A VR ME+ G+ +Y+ +
Sbjct: 385 CWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGY 444
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
+ ++V +++K + P IT+ LI G + + + + MK + N
Sbjct: 445 TMIRNEEKCLIVFKRLKECGFA-PSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHN 503
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T + ++ + + ++ A +FE+ + DG LKPD Y+++++A
Sbjct: 504 MKTYSMLINGFLKLKDWTNAFAVFEDVIK-----------DG--LKPDVVLYNNIIKAFC 550
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ ++ K M C+ ++ +RAG+ FD + +G IP
Sbjct: 551 GMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVH 610
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
F +++ + + EKAV +++ MA A E +T +
Sbjct: 611 TFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTI 650
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 127/319 (39%), Gaps = 39/319 (12%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L++C P + Y + ++G + + +++ SK +K++ K+ ++
Sbjct: 460 LKECGFAPSVITYGCLINMYTKIGKVSKALEV--------SKMMKSVGIKH-------NM 504
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y+ ++N + W F VF+ + K GLKP Y ++ G D ++
Sbjct: 505 KTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKE 564
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K + T+ ++ F G++ A+ M + G + T + L L +
Sbjct: 565 MQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRK 624
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
+ A+ +++++ +L P E T+T ++ G F M++ + ++ T
Sbjct: 625 MEKAVEILDEM-ALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYE 683
Query: 494 AMLKVYSRNDMFSKA----KELFEETTRANSSGYTFL------SGD------------GA 531
A+LK ++ A +E+ + N+ Y L GD
Sbjct: 684 ALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQE 743
Query: 532 PLKPDEYTYSSMLEASATA 550
++PD +TY+S + A A
Sbjct: 744 GVQPDIHTYTSFINACCKA 762
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 167/409 (40%), Gaps = 52/409 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M ++GL+ L+ G GS ++A +++ +K L Y L+ L
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL---MKQTNVLPDLCTYNILINGLCN 322
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG E L + + M + L PD+ Y+++ ++GL E KL+E+M K +
Sbjct: 323 AGSMREGLELMDAM-KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQV 381
Query: 301 MH-----------------RKNWDPV----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
H RK + V PD+V Y+ ++ A + G + ++
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + G+K + T ++ + + K D H K G + +TY L+ F+ E K
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEIT 457
+ +A+ M++ + T S + L LC++G+ + AM EK L S P + T
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM---EKFDELAESGLLPDDST 558
Query: 458 FTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE--- 513
F +I+ G ++ + + +K +P+ T N +L + M KA F
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Query: 514 -----ETTRANS------------SGYTFLSG-DGAPLKPDEYTYSSML 544
+T N+ Y LS + L+PD +TY+S +
Sbjct: 619 EEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 134/315 (42%), Gaps = 44/315 (13%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
G+PH AL+IF M+ L P++ +++ + GL++ PS +
Sbjct: 145 GKPHVALQIFQKMIR-LKLKPNLLTCNTLLI-----GLVR-----------YPSSFSISS 187
Query: 302 HRKNWDPVLEP----DLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
R+ +D +++ ++ +N ++N C+ + + + + + + P TY +
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ M + G+ + E M K+G +TY LV + + G + EA V M+Q V+
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
Y L LCN G ++ + +++ +KSL+ +P +T+ LI + G +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKL-QPDVVTYNTLIDGCFELGLSLEARK 366
Query: 477 IFQHMK-DHCEPNIGTVNAMLKVYS----RNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ + M+ D + N T N LK R + K KEL D
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV----------------DMH 410
Query: 532 PLKPDEYTYSSMLEA 546
PD TY ++++A
Sbjct: 411 GFSPDIVTYHTLIKA 425
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/391 (18%), Positives = 145/391 (37%), Gaps = 29/391 (7%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
G+ +AL + M+ + + PD Y+++ + + G L +L +L+ M++
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNG------- 270
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
L P+ V YN ++ K F + + ++++ + P TY + + +
Sbjct: 271 --------LVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+G E M +TY L+ +E G EA + ME GV
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT 382
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
+ LC + + V+++ + P +T+ LI + + G + + + + M
Sbjct: 383 HNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442
Query: 482 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
+ + N T+N +L + +A L A+ G+ DE TY
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKLDEAHNLL---NSAHKRGFIV----------DEVTY 489
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+++ + E ++ M + L+ GK L FD L E
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
+G +P F +++ + EKA N
Sbjct: 550 SGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 17/208 (8%)
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA---FWEEGKINEA 403
PS A + +A+ L GK + + F+KM + LT L+ + I+ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+M + GV + L C G+ +DA+ ++E++ S P +T+ ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 464 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ G + D + MK + PN T N ++ Y + +A ++ E + N
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN--- 305
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ PD TY+ ++ A
Sbjct: 306 ----------VLPDLCTYNILINGLCNA 323
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD +N+++ + + F + + K KP T + + + + G +
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
FF + + E + +TY ++ AF ++ K+ EA + ME++G+ Y L
Sbjct: 612 NFFNTLIEERE-VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 430 CNNGRWQDA 438
+G+ +
Sbjct: 671 MEDGKLSET 679
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 172/411 (41%), Gaps = 52/411 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M ++GL+ L+ G GS ++A +++ +K L Y L+ +
Sbjct: 266 MKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL---MKQTNILPDLCTYNILINGVCN 322
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKR 297
AG E L + ++M + L PD+ Y+++ ++GL E KL+E+M KP++
Sbjct: 323 AGSIREGLELMDVM-KSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQV 381
Query: 298 IKNMH--------------RKNWDPV----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
N+ RK + V PD+V Y+ ++ A + G + ++
Sbjct: 382 THNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + G+K + T ++ + + K D H K G + +TY L+ ++ E K
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEK 501
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEIT 457
+ +A M++ + T + + L LC++G+ + AM EK L S P + T
Sbjct: 502 VEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAM---EKFDELAESGLLPDDCT 558
Query: 458 FTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE--- 513
F +I+ G ++ + + +K +P+ T N +L + M KA F
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Query: 514 -----ETTRANS------------SGYTFLSG-DGAPLKPDEYTYSSMLEA 546
+T N+ Y LS + L+PD +TY+S++ +
Sbjct: 619 TEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITS 669
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 139/316 (43%), Gaps = 44/316 (13%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG+PH AL++F M+ L P++ +++ + GL++ PS
Sbjct: 144 AGKPHVALQVFQKMIR-LKLKPNLLTCNTLLI-----GLVR-----------YPSSFSIA 186
Query: 301 MHRKNWDPVLEP----DLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
R+ +D +++ D+ +N ++N C+ + + + + + + P TY
Sbjct: 187 SAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTI 246
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ M + G+ V + M ++G +TY LV + + G + EA V M+Q +
Sbjct: 247 LKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNI 306
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ Y L +CN G ++ + +++ +KSL+ +P +T+ LI + G +
Sbjct: 307 LPDLCTYNILINGVCNAGSIREGLELMDVMKSLK-LQPDVVTYNTLIDGCFELGLSLEAK 365
Query: 476 SIFQHMK-DHCEPNIGTVNAMLKVYS----RNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ + M+ D +PN T N LK R ++ K KEL E G++
Sbjct: 366 KLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVE------MHGFS------ 413
Query: 531 APLKPDEYTYSSMLEA 546
PD TY ++++A
Sbjct: 414 ----PDIVTYHTLIKA 425
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/391 (19%), Positives = 147/391 (37%), Gaps = 29/391 (7%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
G+ +AL + M+ + N+ PD Y+++ + + G L ++ L+ M++
Sbjct: 218 GKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNG------- 270
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
L P+ V YN ++ K F + + ++++ + P TY + + +
Sbjct: 271 --------LVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCN 322
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+G E M +TY L+ +E G EA + ME GV
Sbjct: 323 AGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVT 382
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
+ LC + ++ V+++ + P +T+ LI + + G + + + + M
Sbjct: 383 HNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442
Query: 482 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
+ + N T+N +L + +A L + A+ GY DE TY
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKVDEAHNLLDS---AHKRGYIV----------DEVTY 489
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+++ + E ++ M T L+ GK L FD L E
Sbjct: 490 GTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
+G +P F +++ + EKA N
Sbjct: 550 SGLLPDDCTFNSIILGYCKEGRVEKAFEFYN 580
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 17/208 (8%)
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA---FWEEGKINEA 403
PS A + +A+ L +GK + + F+KM + LT L+ + I A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+M + GV + L C G+ +DA+ ++E++ S + P +T+ ++
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248
Query: 464 SSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ G + D + MK + PN T N ++ Y + +A ++ E + N
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN--- 305
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ PD TY+ ++ A
Sbjct: 306 ----------ILPDLCTYNILINGVCNA 323
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD +N+++ + + F + + K KP T + + + + G +
Sbjct: 552 LLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
FF + E + +TY ++ AF ++ K+ EA + ME++ + Y + L
Sbjct: 612 NFFNTLITERE-VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSL 670
Query: 430 CNNGRWQDA 438
+G+ +A
Sbjct: 671 MEDGKLSEA 679
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 172/418 (41%), Gaps = 36/418 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F+Y L+ L + R +A ++F+ M + NL I Y+++ +VG L K+ E
Sbjct: 212 FIYNVLIGGLCREKRIRDAEKMFDEMC-NINLVGSIVTYNTLIDGYCKVGELDAAFKMRE 270
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RM++K + P+++ +N++L+ + K + K++ +G P
Sbjct: 271 RMKEKS---------------VAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPD 315
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + +L+ + E + + + G I T +L+ ++GK+ +A ++
Sbjct: 316 GYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILK 375
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+ G+V +Y C G A+L +E+++S +P ITF LI D
Sbjct: 376 KFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESF-GLRPNSITFNSLIDKFCDM 434
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
+D + M + P++ T N ++ Y + F + ++ E+
Sbjct: 435 KEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG-------- 486
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+KP+ +Y S++ + E V + M G + + L+ + GK
Sbjct: 487 -----VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGK 541
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ----SNYEKAVALINAMAYAPFHIT 641
FD ++ + EI L +LI + + + E + I + ++P IT
Sbjct: 542 VKDALRFFDEMMRS-EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVIT 598
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 152/379 (40%), Gaps = 45/379 (11%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ- 292
LL L K G+ +A I E+ L D Y++ ++G + + + IERM
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTEN-GLVADEVIYNTFVNGYCRIGDMNKAILTIERMESF 415
Query: 293 -----------------------KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
K + +K M K P +E YN +++
Sbjct: 416 GLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVE----TYNTLIDGYGKLCT 471
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+ F + +Q+ + G+KP+ +YG + + + GK R M G A Y +
Sbjct: 472 FDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNM 531
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ GK+ +A+ M + + T Y L LC G+ +A + +I S
Sbjct: 532 LIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA 508
HS P IT+ LI + G++ C+ +++ MK+ +P + T + ++ S+ +
Sbjct: 592 HS-PDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGI-ELV 649
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
++L+ E + N L PD Y++M+ A + +++GM G
Sbjct: 650 EKLYNEMLQMN-------------LLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGI 696
Query: 569 QLDQTKHAWLLVEASRAGK 587
D+ + L++ R GK
Sbjct: 697 HPDKMTYNSLILGHFREGK 715
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 126/302 (41%), Gaps = 25/302 (8%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+WV + +K S Y L+ GK +I M E+ + P++ +Y S+
Sbjct: 442 EWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM-EEIGVKPNVVSYGSLINC 500
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + G + E ++ M + + P+ VYN +++ + K
Sbjct: 501 LCKDGKILEAEIVLRDMICRG---------------VLPNAQVYNMLIDGSCMVGKVKDA 545
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F ++ +S + P+ TY + ++ + + GK +F ++ SG + +TY L+
Sbjct: 546 LRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISG 605
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS---LRH 450
+ G +++ + M+ G+ T Y+ L +G ++ + +VEK+ + +
Sbjct: 606 YANAGNVSKCLGLYETMKNLGIKPTVRTYHPLI-----SGCSKEGIELVEKLYNEMLQMN 660
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
P + + +I + G+ S+ Q M D P+ T N+++ + R S K
Sbjct: 661 LLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIK 720
Query: 510 EL 511
+L
Sbjct: 721 DL 722
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 20/250 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL KG +A L + D+ Y L++ AG + L ++ M
Sbjct: 567 LIDGLCKKGKLTEAEDFLTQITSSGHSPDV---ITYNSLISGYANAGNVSKCLGLYETM- 622
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ + P + YH + G KE ++L+E++ + M + N L PD V
Sbjct: 623 KNLGIKPTVRTYHPLIS-----GCSKEGIELVEKLYNE-------MLQMN----LLPDRV 666
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYNA+++ + + + + + G+ P TY + + GK + + M
Sbjct: 667 VYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNM 726
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
A A TY +LV+ + + A R M + + AS+ EL L GR
Sbjct: 727 KAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRL 786
Query: 436 QDAMLVVEKI 445
Q+ ++ ++
Sbjct: 787 QEVQVICSEM 796
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/379 (18%), Positives = 142/379 (37%), Gaps = 15/379 (3%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ + + +L+ C S + +++ +R+ G PS + L ++ ++ V + F
Sbjct: 106 ITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFM 165
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
++ SG Y ++A + + + + +M +RGV +Y L LC
Sbjct: 166 EIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREK 225
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
R +DA + +++ ++ + +T+ LI G +D + + MK+ PNI T
Sbjct: 226 RIRDAEKMFDEMCNINLVGSI-VTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITF 284
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N++L + +A+ L +E +G+ PD YTYS + +
Sbjct: 285 NSLLSGLCKMRKMKEARSLLKE---MEVNGFM----------PDGYTYSILFDGLLRCDD 331
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+Y+ G +++ + LL + GK E E G + + +
Sbjct: 332 GNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNT 391
Query: 613 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCN 672
+ + KA+ I M + L + D DK E+ + +
Sbjct: 392 FVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKG 451
Query: 673 AASSEITVSNLSRALHALC 691
S T + L LC
Sbjct: 452 VTPSVETYNTLIDGYGKLC 470
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/372 (18%), Positives = 137/372 (36%), Gaps = 18/372 (4%)
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
V Q+ V +F ++ SG + Y A++ ++ + EF M K G
Sbjct: 152 VNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNV 211
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
Y VL+ E +I +A M +VG+ Y L C G A + E+
Sbjct: 212 FIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRER 271
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRND 503
+K + P ITF L+ + + S+ + M+ + P+ T + + R D
Sbjct: 272 MKE-KSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCD 330
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+ A EL+E+ T ++ + YT S +L + E E + K
Sbjct: 331 DGNGAMELYEQATEKG-------------IRINNYTGSILLNGLCKQGKVEKAEEILKKF 377
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
+G D+ + + R G + + + G P+ + F ++ +
Sbjct: 378 TENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEM 437
Query: 624 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNL 683
+KA + MA + + L + + D+ ++L + + ++ +L
Sbjct: 438 DKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSL 497
Query: 684 SRALHALCRSEK 695
++ LC+ K
Sbjct: 498 ---INCLCKDGK 506
>gi|357140623|ref|XP_003571864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Brachypodium distachyon]
Length = 751
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/512 (20%), Positives = 204/512 (39%), Gaps = 69/512 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+A GKA P EA+++F LM E + +Y++V L ++ R R+
Sbjct: 182 LVAAYGKARIPQEAVKLFRLMPE-LGITRTALSYNAV------------LKAILCRGREA 228
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
++RI N + + PDL YN ++ S + + VF ++ G+ P TY
Sbjct: 229 MARRIYNAMIADG---VAPDLSTYNTLIWGFGLSEKMEAAVRVFGDMKGHGVTPDVTTYN 285
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +++G + + F +M +G +++Y V+++ + E K+ EAV + M ++
Sbjct: 286 NLINAWVRNGDLESARKVFDEMPGAGFERNSVSYNVMIKGYVEAKKVEEAVGLFKEMGEK 345
Query: 414 GVVGTASVYYELACCLCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
G+ + + L LC++ GR +A VE + R + + F L+ + G +D
Sbjct: 346 GLRSSEKTFAALMPGLCDDQGRTAEARKAVEDMAERRLTPKDKTVFLRLVTTLCKAGDLD 405
Query: 473 DCISI------FQH-----------MKDHCEPNI--GTVNAMLKVYSRNDMFSKAKELFE 513
+ + F+H M+ C G V + ++ + + S + E
Sbjct: 406 GALEVHKKSGQFKHVLVDPRQYGVLMQSLCAGGKCDGAVEVLDELLEKGTLLSPKSPVLE 465
Query: 514 ETTRANSSGYTFLSGDGAPLKP-------------DEYTYSSMLEASATAHQWEYFEYVY 560
A + +L +G K D+ ++S++ A E + +
Sbjct: 466 AP--AYNPVIEYLCNNGNTKKAETFFRQLMKKGVDDKLAFNSLIRGHAKEGVLEAAQEIL 523
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M G D H L+ + + + A DS++E G +P P F +++
Sbjct: 524 AIMTRRGVPTDPISHTLLVDSFLKKNEPADAKTALDSMMEQGHLPSPALFKSVMVALFDD 583
Query: 621 SNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLL------NALCNCNAA 674
+ A ++ +M E+ TE N D ++ LE L A+ N
Sbjct: 584 GRVQTASRVMRSM-------IEKGVTE----NMD-MAHKILEALFMRGHVDEAIGRVNLM 631
Query: 675 SSEITVSNLSRALHALCRSEKERDLSSSAHFG 706
+ +L + L ALC+ +K + A F
Sbjct: 632 VENGCMPDLDKLLVALCQKDKVMEAHKLADFA 663
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 28/296 (9%)
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK-QLRKSGLKPSA 349
R+K + R++N R P L LV + V+++ +++ F+ R++G +P
Sbjct: 84 RRKWTTRLENSVRL-LSPTLSAPLV--HGVISSAAAANRADLALQFFRFAYRRAGFRPEP 140
Query: 350 ATYGLAMEV-----MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
AT+ L + V ML + L+ EA T LV A+ + EAV
Sbjct: 141 ATFSLLIPVLASNRMLNHARCILLETMPAFSVSPDEA----TVAALVAAYGKARIPQEAV 196
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
R M + G+ TA Y + + GR A + + + + L T+ LI
Sbjct: 197 KLFRLMPELGITRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDLS-TYNTLIWG 255
Query: 465 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
++ + +F MK H P++ T N ++ + RN A+++F+E
Sbjct: 256 FGLSEKMEAAVRVFGDMKGHGVTPDVTTYNNLINAWVRNGDLESARKVFDEMP------- 308
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
GA + + +Y+ M++ A + E ++K M G + + A L+
Sbjct: 309 ------GAGFERNSVSYNVMIKGYVEAKKVEEAVGLFKEMGEKGLRSSEKTFAALM 358
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 170/408 (41%), Gaps = 36/408 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y+ LL L + EA + ++M ED N PD+ +Y +V + G + + L
Sbjct: 85 FSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLF 144
Query: 288 ERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+M + + + + + ++ D + P+ YN++++ + S
Sbjct: 145 CKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSS 204
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
QW + K++ + G +P+ TY + ++ + +SG + E F M +SG A TY
Sbjct: 205 GQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTY 264
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + EG + E M Q G+ + C GR +A L K++
Sbjct: 265 GSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQ 324
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFS 506
L P +T+T +I G +DD +S F Q + D PNI T ++ +S +
Sbjct: 325 LGF-MPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWE 383
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
KA+ELF E + G P PD +++M++ + + ++ M +
Sbjct: 384 KAEELFYE-----------MMDRGIP--PDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRA 430
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
G + + + ++ AG+ + D +L G P + F +L
Sbjct: 431 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL 478
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 130/332 (39%), Gaps = 40/332 (12%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
R +L+D L + A+ + M QSG LL G +G+ + +
Sbjct: 223 RPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNN 282
Query: 212 VLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
V D + G++ S +Y K GR EA F + ++ PDI Y +
Sbjct: 283 VKDLMVQNGMRSNHHTFSIEIYAYC-----KCGRLDEASLTF-IKMQQLGFMPDIVTYTT 336
Query: 270 VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
V L ++G L + + +M D L P+++ + +++ +
Sbjct: 337 VIDGLCKIGRLDDAMSRFCQM---------------IDDGLSPNIITFTTLIHGFSMYGK 381
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
W+ +F ++ G+ P + ++ + + GK + F M ++G ++Y
Sbjct: 382 WEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNT 441
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
++ ++ G++ E + + +M G+ TA + L D M+ +
Sbjct: 442 MIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL----------DGMVSM------- 484
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
KP T LI S + G I+D +++F+ M
Sbjct: 485 GLKPDVDTCKTLIDSCCEDGRIEDILTLFREM 516
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 128/346 (36%), Gaps = 57/346 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY-DLV 368
+ PD+ + +++ C + F Q+ K+GL+ A + + + + D +
Sbjct: 9 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG------VVGTASVY 422
+ R+M + G +Y L++ E K EA + M + G VV ++V
Sbjct: 69 NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128
Query: 423 ------------YELACCLCNNGRWQDAMLVVEKIKSL------------------RHSK 452
Y L C + ++G + + I L H
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P T+ LI + G + + I + M +D PN+ T N ++ ++ ++A+E+
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F ++ KPD TY S+L AT V M +G
Sbjct: 249 FNSMIQSGP-------------KPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGM--- 292
Query: 572 QTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEML 614
++ H +E KC L+ A F + + G +P + +T ++
Sbjct: 293 RSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVI 338
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 169/450 (37%), Gaps = 75/450 (16%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V +D + +WKF M GLM
Sbjct: 270 VCIDCFGKAGKVDMSWKFFHEMKSHGLM-------------------------------- 297
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
YT ++ +L KA R EA+ +F LE P AY+++ + G G
Sbjct: 298 ------PDDVTYTSMIGVLCKANRLDEAVELFE-QLEQNRKVPCAYAYNTMIMGYGSAGK 350
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E L+ER + K S P ++ YN +L + + +F++
Sbjct: 351 FDEAYGLLERQKAKGSI---------------PSVIAYNCILTCLGKKRRVEEALRIFEE 395
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+++ + P+ TY + ++++ + GK + E M ++G LT +++ + K
Sbjct: 396 MKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQK 454
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ EA + M+ + A + L L GR DA + EK+ H P I +T
Sbjct: 455 LEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV-PGAIVYT 513
Query: 460 GLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI S G +D I++ M C P++ +N + + K + LF E
Sbjct: 514 SLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI--- 570
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAW 577
N+ G+ PD +YS ++ A E +E Y M GC LD +
Sbjct: 571 NAHGFI----------PDARSYSILIHGLVKAGLANETYELFY-AMKEQGCVLDTHAYNA 619
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
++ ++GK + A+ L E HP
Sbjct: 620 VIDGFCKSGK---VNKAYQLLEEMKVKGHP 646
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 162/398 (40%), Gaps = 31/398 (7%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
G+ DK + ++ L+ LGK GR +A ++ ML DC P Y S+ + +
Sbjct: 464 GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML-DCGHVPGAIVYTSLIRSFFKC 522
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G R++ +I +++ PDL + N ++ + + + +F
Sbjct: 523 G------------RKEDGHKI---YKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALF 567
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+++ G P A +Y + + ++++G + +E F M + G + Y ++ F +
Sbjct: 568 REINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKS 627
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
GK+N+A + M+ +G T Y + L R +A ++ E+ KS K +
Sbjct: 628 GKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS-NGIKLNVVV 686
Query: 458 FTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
++ LI G ID+ I + M+ PN+ T N +L D KA+E+
Sbjct: 687 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL------DALVKAEEI----- 735
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
N + F S P++ TYS ++ ++ ++ M G + + +
Sbjct: 736 --NEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYT 793
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ ++AG F G IP + M+
Sbjct: 794 TMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 831
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/446 (20%), Positives = 180/446 (40%), Gaps = 59/446 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A +L+ K K + S Y +L LGK R EALRIF M
Sbjct: 341 MIMGYGSAGKFDEAYGLLER---QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 397
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P++ Y+ + L + G L +++ + M + L P+++
Sbjct: 398 RDA--VPNVPTYNILIDMLCREGKLNAALEIRDDMERAG---------------LFPNVL 440
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ + + + +F+ + P+A T+ ++ + + G+ D + + KM
Sbjct: 441 TVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKM 500
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G GA+ Y L+R+F++ G+ + + M G ++ C+ G
Sbjct: 501 LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGET 560
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+ + +I + P +++ LI + G ++ +F MK+ C + NA
Sbjct: 561 EKGRALFREINA-HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNA 619
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + ++ +KA +L EE + G P P TY S+++ A
Sbjct: 620 VIDGFCKSGKVNKAYQLLEE-----------MKVKGHP--PTVVTYGSVIDGLA------ 660
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEIPHPLFF 610
++D+ A++L E +++ L + SL++ G I
Sbjct: 661 --------------KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLI 706
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYA 636
E L+Q + N L++A+ A
Sbjct: 707 MEELMQKGLTPNVYTWNCLLDALVKA 732
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/384 (17%), Positives = 148/384 (38%), Gaps = 65/384 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L + P L +F+ M ++ ++ + ++ + G + + L++ M
Sbjct: 198 YTILIGALSEVREPDPMLILFHQM-QELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEM 256
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L+ D+V+YN ++ + + + F +++ GL P
Sbjct: 257 KSNS---------------LDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDV 301
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + V+ ++ + D E F ++ ++ + A Y ++ + GK +EA +
Sbjct: 302 TYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ 361
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ +G + + Y + CL R ++A+
Sbjct: 362 KAKGSIPSVIAYNCILTCLGKKRRVEEAL------------------------------- 390
Query: 471 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
IF+ MK PN+ T N ++ + R + A E+ ++ RA
Sbjct: 391 -----RIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAG----------- 434
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
L P+ T + M++ A + E +++GM C + + L+ + G+
Sbjct: 435 --LFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDD 492
Query: 591 LEHAFDSLLEAGEIPHPLFFTEML 614
++ +L+ G +P + +T ++
Sbjct: 493 AYSLYEKMLDCGHVPGAIVYTSLI 516
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 119/293 (40%), Gaps = 19/293 (6%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A + +L+ L + + + ++ M + G + ++ G G +A +L
Sbjct: 578 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 637
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ +K K + Y ++ L K R EA +F + + ++ Y S+
Sbjct: 638 EE---MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN-GIKLNVVVYSSLIDG 693
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
G+VG + E ++E + QK L P++ +N +L+A V + +
Sbjct: 694 FGKVGRIDEAYLIMEELMQKG---------------LTPNVYTWNCLLDALVKAEEINEA 738
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F+ ++ P+ TY + + + + K++ F+++M K G +TY ++
Sbjct: 739 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 798
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
+ G I EA + G + ++ Y + L + + DA + E+ +
Sbjct: 799 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 851
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 140/320 (43%), Gaps = 21/320 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + G W +L + G + + ++ L+ + K G+ EA ++N M+
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIG---RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 371
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD Y+S+ + L E ++ + M K EPD+V
Sbjct: 372 TR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC---------------EPDIV 415
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ ++N+ + + +F+++ GL P+ TY + QSGK + E F++M
Sbjct: 416 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 475
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +TY +L+ + G++N+A+ M++ + +Y + +CN +
Sbjct: 476 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 535
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
DA + + S + KP +T+ +I G + + +F+ MK D C P+ T N
Sbjct: 536 DDAWSLFCSL-SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 594
Query: 495 MLKVYSRNDMFSKAKELFEE 514
+++ + + EL EE
Sbjct: 595 LIRAHLGGSGLISSVELIEE 614
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/373 (18%), Positives = 157/373 (42%), Gaps = 30/373 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD + ++ G + E V L++RM + + PDLV + ++
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR---------------PDLVTVSTLI 211
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N + + ++ + G +P TYG + + +SG L + FRKM +
Sbjct: 212 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 271
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+ Y +++ + ++G ++A++ ME +G+ Y L LCN+G+W D +
Sbjct: 272 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 331
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
+ ++ R+ P +TF+ LI + G + + ++ M P+ T N+++ +
Sbjct: 332 LREMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 390
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ + +A ++F+ + G +PD TYS ++ + A + + ++
Sbjct: 391 KENCLHEANQMFD-----------LMVSKGC--EPDIVTYSILINSYCKAKRVDDGMRLF 437
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
+ ++ G + + L++ ++GK + + F ++ G P + + +L
Sbjct: 438 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 497
Query: 621 SNYEKAVALINAM 633
KA+ + M
Sbjct: 498 GELNKALEIFEKM 510
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 157/409 (38%), Gaps = 47/409 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL KG +A+ ++D + YG + Y +L L K+G AL +F
Sbjct: 210 LINGLCLKGRVSEALVLIDRMVEYGFQ-----PDEVTYGPVLNRLCKSGNSALALDLFRK 264
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M E+ N+ + Y V +L + G + + L M K K D
Sbjct: 265 M-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK---------------AD 308
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+V Y++++ +W + +++ + P T+ ++V ++ GK E +
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M G A +TY L+ F +E ++EA M +G Y L C
Sbjct: 369 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 428
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
R D M + +I S + P IT+ L++ G ++ +FQ M P++ T
Sbjct: 429 RVDDGMRLFREISS-KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 487
Query: 493 NAMLKVYSRNDMFSKAKELFEE----------------------TTRANSSGYTFLSGDG 530
+L N +KA E+FE+ ++ + + F S
Sbjct: 488 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 547
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+KPD TY+ M+ + +++ M GC D + L+
Sbjct: 548 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/343 (17%), Positives = 131/343 (38%), Gaps = 52/343 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+E D+ ++N + F V + K G +P T+ + G+
Sbjct: 130 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 189
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV---------------------- 407
+M + + +T L+ +G+++EA+ +
Sbjct: 190 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 249
Query: 408 -------------RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
R ME+R + + Y + LC +G + DA+ + +++ ++ K
Sbjct: 250 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME-MKGIKAD 308
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
+T++ LI + G DD + + M + P++ T +A++ V+ + +AKEL+
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368
Query: 514 E-TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
E TR + PD TY+S+++ + ++ M GC+ D
Sbjct: 369 EMITRG--------------IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 414
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
++ L+ +A + F + G IP+ + + +++
Sbjct: 415 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 457
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 142/341 (41%), Gaps = 36/341 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P + +N + +A + Q+ V K + +G++ T + + + K
Sbjct: 97 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 156
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN---MEQRGVVGTASVYYELACC 428
+ K G +T+ LV F EG+++EAVA V M+QR + T S L
Sbjct: 157 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST---LING 213
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
LC GR +A+++++++ +P E+T+ ++ G+ + +F+ M++ + +
Sbjct: 214 LCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 272
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSG---------DGAPL- 533
++ + ++ ++ F A LF E +A+ Y+ L G DGA +
Sbjct: 273 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 332
Query: 534 --------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
PD T+S++++ + + +Y M G D + L+ +
Sbjct: 333 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 392
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
H FD ++ G P +++ +I+ ++Y KA
Sbjct: 393 NCLHEANQMFDLMVSKGCEP------DIVTYSILINSYCKA 427
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 21/210 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ KA R + +R+F + L P+ Y+++ + Q G L +L + M
Sbjct: 417 YSILINSYCKAKRVDDGMRLFR-EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 475
Query: 291 --RQKPSKRIK------------------NMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
R P + + K + + +YN +++ + +
Sbjct: 476 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 535
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ +F L G+KP TY + + + + G FRKM + G TY +L
Sbjct: 536 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 595
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+RA + +V + M+ G +S
Sbjct: 596 IRAHLGGSGLISSVELIEEMKVCGFSADSS 625
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 156/376 (41%), Gaps = 76/376 (20%)
Query: 234 LLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
++ L G+ EAL +F+ ++ D C L D+ L + G +E +K+++ M
Sbjct: 5 IVLCLCHVGKLDEALELFHSLVSDGCGLPADLLVRE-----LSKAGRAEECLKVVKLMLD 59
Query: 293 KPSKRIKNMHRKNWDPVLEPDL--------------------VVYNAVLNACVPSHQWKG 332
+ R +++ D + + D+ V YN ++NA + +
Sbjct: 60 RQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDE 119
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+F +++ G PS +TY + + + + +F+ ++ SG +TY +LV
Sbjct: 120 AIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVD 179
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
F + ++ EAV + + RG V T++ Y + L G+ +A L +++ +
Sbjct: 180 GFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEK-DGVR 238
Query: 453 PLEITFTGLI-----------------------------ISS--MDG----GHIDDCISI 477
P E+TFT LI I S MDG G +D+ I
Sbjct: 239 PQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRI 298
Query: 478 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
F+ M + C PN + N ++ + S+A+E+FEE + + KPD
Sbjct: 299 FELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQA-------------KPD 345
Query: 537 EYTYSSMLEASATAHQ 552
TYS+ ++ AH+
Sbjct: 346 VVTYSTFMDGLCRAHR 361
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/401 (19%), Positives = 138/401 (34%), Gaps = 72/401 (17%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
W LKD R L + Y L+ K R EA+++F M P + Y+++ L
Sbjct: 88 WFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAP-GCAPSTSTYNTLIGGL 146
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV------------------ 316
+V L E + ER+ + + D + D V
Sbjct: 147 CRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTS 206
Query: 317 --YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN +++ + F ++ K G++P T+ + ++ + ++ + E F
Sbjct: 207 APYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFS 266
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+SG + + L+ F + G ++EA M RG L LC R
Sbjct: 267 YLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKR 326
Query: 435 WQDAMLVVEKIKSLRHSKPLEITF-----------------------------------T 459
A V E++ R +KP +T+ T
Sbjct: 327 LSQAREVFEEVVK-RQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYT 385
Query: 460 GLIISSMDGGHIDDCISIFQ--HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
LI G +D+ +F+ C PN T N ++ + +A+ELF+
Sbjct: 386 ALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVE 445
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
++PD T+S+M +A W+ + +
Sbjct: 446 RG-------------VQPDCRTFSAMANNTAKTEGWDIYSW 473
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 160/394 (40%), Gaps = 30/394 (7%)
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
NL P Y+S+ Q G ++ + L+ +M ++ + +L +Y
Sbjct: 117 NLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEG---------------FQGNLGLYT 161
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
VLN + F +L+ GL P+AATYG +++ ++G + +M K
Sbjct: 162 TVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKH 221
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G + + Y +++ + G A +M G+ +Y L C GR A
Sbjct: 222 GVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKA 281
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK 497
+ V+E I++ R +E T+T ++ + GG+I + +F +K P + + N++L
Sbjct: 282 LGVLENIEANRLLPTIE-TYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLS 340
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
++ A+ + E AN + P+E +Y+++ E A A E
Sbjct: 341 GLAKARQMENARLMLNEML-ANG------------VVPNERSYTALTEGYARAGDVEKAF 387
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+++ M +D + LL ++G F + +AG + + + ML
Sbjct: 388 GMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGW 447
Query: 618 IVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+ KA L+N M FH+ +T ++
Sbjct: 448 ARKGELSKARDLLNDMQKHGFHLDTICYTSFIKA 481
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 19/230 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L G G+ ++A+ V D + + + S Y LL+ L KA + A + N ML
Sbjct: 303 ILDGYVKGGNIQKALEVFDRIKTAGLRPGVVS---YNSLLSGLAKARQMENARLMLNEML 359
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P+ +Y ++ + G +++ + +RM+++ L D+V
Sbjct: 360 AN-GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN---------------LAIDIV 403
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y A+L AC S + VF+Q+ +GLK + TY ++ + G+ + M
Sbjct: 404 AYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDM 463
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
K G + + Y ++A + G E + M ++ + A Y L
Sbjct: 464 QKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTL 513
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/343 (17%), Positives = 131/343 (38%), Gaps = 15/343 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P++ +Y ++++A + +G +++ G++ + A + + +G +
Sbjct: 48 IKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAE 107
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+F K G + Y +V+A+ + G + A + ME+ G G +Y +
Sbjct: 108 HWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGF 167
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ + ++K+ S P T+ ++ G++ + I + M H PN
Sbjct: 168 AEIRDEEKCLSFFHRLKACGLS-PTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPN 226
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
++ Y+R F+ A +++E+ A LKPD Y+ ++ A
Sbjct: 227 KMIYAMIMDGYARGGDFTAAFKVWEDMVSAG-------------LKPDIVIYNILVHAFC 273
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A + + V + + + + +L + G FD + AG P +
Sbjct: 274 KAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVV 333
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+ +L E A ++N M ER +T L E
Sbjct: 334 SYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEG 376
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/487 (20%), Positives = 193/487 (39%), Gaps = 42/487 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S YT LL + K+ EA+ + + M P+I Y+ + + + G + + ++
Sbjct: 186 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAKEI 244
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ R+ +PD+V Y VL + +W V +F ++
Sbjct: 245 LNRLSSYG---------------FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV 289
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ T+ + + + G + + ++M++ G +++ A ++G++++A
Sbjct: 290 PNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDF 349
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISS 465
+ NM G Y + LC GRW+ A L+ E ++ ++ P E+TF I
Sbjct: 350 LNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR--KNCPPNEVTFNTFICIL 407
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G I+ I + + M ++ C I T NA++ + A ELF
Sbjct: 408 CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF------------ 455
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
+ P +P+ TY+++L A + + + M C L+ L+ +
Sbjct: 456 ----NNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQ 511
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
G + ++E G P+ + F +L N E+A+ L++ + +
Sbjct: 512 KGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLD--- 568
Query: 645 WTELFESNEDRISR-DKLEKLLNALCNCNAASSEITVSNLSRALHALC-RSEKERDLSSS 702
T + S D +SR D+ E+ + L V ++ L ALC R E ++ +
Sbjct: 569 -TITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFF 627
Query: 703 AHFGSQA 709
A+ S
Sbjct: 628 AYMVSNG 634
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 134/344 (38%), Gaps = 24/344 (6%)
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G +PS TY + +E + +S + +M G +TY V++ EG++++A
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ + G Y + LC RW D ++ ++ + P E+TF L+
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD-KKCVPNEVTFDMLVR 300
Query: 464 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
GG ++ I + Q M H C PN N ++ + A
Sbjct: 301 FFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDA-------------- 346
Query: 523 YTFLSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
Y FL+ G PD +Y+++L A +WE+ + + M C ++ +
Sbjct: 347 YDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICI 406
Query: 582 ASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
+ G L+E A + + E G + + ++ VQ + A+ L N + P
Sbjct: 407 LCQKG---LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPN 463
Query: 639 HITERQ-WTELFESNEDRISRDKLEKLLNALCNCNAASSEITVS 681
IT T L + + + L +++ C NA + + VS
Sbjct: 464 TITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVS 507
>gi|255660958|gb|ACU25648.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 348
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDRALYVLNGMIKS--GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LDPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 127/303 (41%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K+ ++ Y L+ K G ++L + M
Sbjct: 65 MMRGLFDNGKVDEVISIWEL---MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L + ++ M + K P++
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCK---------------PNVH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N V + +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + K+ A+ + +G ++ L LC+ G+
Sbjct: 226 LDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
Q A+ + + + P ++ L+ G I + + I+ +++ EP+I + N
Sbjct: 286 QLALSLYFDMNRWK-CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNI 344
Query: 495 MLK 497
LK
Sbjct: 345 TLK 347
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/502 (21%), Positives = 202/502 (40%), Gaps = 53/502 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLM---FTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+ L + + F + M GL+ FT G L+ GL +A ++LD +
Sbjct: 284 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA---LINGLCKSRRSNEAKALLDEM 340
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ K ++ VY L+ + G EA ++ M+ + P+ Y ++ L +
Sbjct: 341 SCAELKPNV---VVYANLIDGFMREGNADEAFKMIKEMVA-AGVQPNKITYDNLVRGLCK 396
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
+G + L+++M +++ HR PD + YN ++ H K F +
Sbjct: 397 MGQMDRASLLLKQM-------VRDSHR--------PDTITYNLIIEGHFRHHSKKDAFRL 441
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
++ +G+ P+ TY + + + QSG+ + + +M G A Y L+ +
Sbjct: 442 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 501
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
EG ++ A M + V+ Y L L GR +++ +++ R P E
Sbjct: 502 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE-RGLLPNEF 560
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T++GLI + G ++ + Q M D +PN +L+ Y ++D K F+
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620
Query: 516 T----------------RANSSG-----YTFLSG---DGAPLKPDEYTYSSMLEASATAH 551
+SSG + LSG +G+ PD + YSS++
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGS--VPDVHVYSSLISGLCKTA 678
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
E + M+ G + + L+ ++G + F+S+L G +P+ + +T
Sbjct: 679 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 738
Query: 612 EMLIQAIVQSNYEKAVALINAM 633
++ + + A L N M
Sbjct: 739 SLIDGSCKVGDISNAFYLYNEM 760
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 149/393 (37%), Gaps = 71/393 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ GL G +A +L+ + GLK + FVY L++ + G A IF+
Sbjct: 460 MIHGLCQSGEPEKASDLLEEMTTKGLK-----PNAFVYAPLISGYCREGNVSLACEIFDK 514
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + N+ PD+ Y+S+ L +VG ++E K +M+++ L P+
Sbjct: 515 MTK-VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG---------------LLPN 558
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
Y+ +++ + + + + +++ +GLKP+ Y +E +S + V F+
Sbjct: 559 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 618
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
M G + Y +L+ G + A + +E+ G V VY L LC
Sbjct: 619 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA 678
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 493
+ A +++++ K +PNI N
Sbjct: 679 DREKAFGILDEMS-----------------------------------KKGVDPNIVCYN 703
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A++ ++ S A+ +F L P+ TY+S+++ S
Sbjct: 704 ALIDGLCKSGDISYARNVFNSILAKG-------------LVPNCVTYTSLIDGSCKVGDI 750
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
Y+Y M +G D ++ L S AG
Sbjct: 751 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 783
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 135/331 (40%), Gaps = 24/331 (7%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D + P + NA+L + + ++ V + + +G+ P TY +E + ++D
Sbjct: 202 DRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFD 261
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ +M + G + +TY VL+ G + EA ++ME G+V Y L
Sbjct: 262 TAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 321
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 485
LC + R +A +++++ S KP + + LI M G+ D+ + + M
Sbjct: 322 NGLCKSRRSNEAKALLDEM-SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 380
Query: 486 EPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTFL--------------- 526
+PN T + +++ + +A K++ ++ R ++ Y +
Sbjct: 381 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 440
Query: 527 ---SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+ A + P+ YTYS M+ + + E + + M G + + +A L+
Sbjct: 441 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 500
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
R G L FD + + +P + ++
Sbjct: 501 REGNVSLACEIFDKMTKVNVLPDLYCYNSLI 531
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 3/210 (1%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ VY+++++ + + F + ++ K G+ P+ Y ++ + +SG
Sbjct: 662 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 721
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F + G +TY L+ + G I+ A M G+ A VY L +
Sbjct: 722 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 781
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIG 490
G + AM ++E++ LR + +F L+ G + + + + M PN
Sbjct: 782 AGDLEQAMFLIEEM-FLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 839
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANS 520
T+ ++ S S+ +F E + S
Sbjct: 840 TIENIISGLSEAGKLSEVHTIFVELQQKTS 869
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 100/258 (38%), Gaps = 43/258 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A +V + + K + + YT L+ K G A ++N ML
Sbjct: 705 LIDGLCKSGDISYARNVFNSILA---KGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 761
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--------------------RQKPS 295
+ PD Y + G L++ + LIE M R K
Sbjct: 762 AT-GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQ 820
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ +K +H ++ L + N +++ + + V +F +L++ + +A +
Sbjct: 821 ETLKLLHVIMGRGLVPNALTIEN-IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL 879
Query: 356 MEVMLQSGKY--DLVHEFFRKMAKSGE----------------AIGALTYKVLVRAFWEE 397
M+ GK D+V + R K G +G +Y +V +
Sbjct: 880 FMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRK 939
Query: 398 GKINEAVAAVRNMEQRGV 415
GK++EA+ ++ M++RG+
Sbjct: 940 GKLSEALNLLKEMDKRGI 957
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 176/429 (41%), Gaps = 47/429 (10%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR-IFNL 253
+LL+ L GS+ +++L ++ K D + ++ L + H + +F L
Sbjct: 97 ELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIF---LETYATSHHLHAEINPLFLL 153
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M D + PD +++VA++L LVK K ++ +H K + PD
Sbjct: 154 MERDFAVKPD-TRFYNVALSL--------LVK------ANKLKLVETLHSKMVADAVPPD 198
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ +N ++ A +HQ + + + + GL+P T+ M+ ++ +
Sbjct: 199 VSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKE 258
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
M +SG + +++ VLV +EG+I EA+ + E+ G + L LC G
Sbjct: 259 LMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTG 316
Query: 434 RWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
+ + +++ + L L++ T+ LI G ID+ + I HM CEPN T
Sbjct: 317 HIKQGLEMMDFM--LEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVT 374
Query: 492 VNAMLKVYSRNDMFSKAKEL---------FEETTRANS--SGYTFLSGDGAPLK------ 534
N ++ + + A EL + NS G S ++
Sbjct: 375 YNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMK 434
Query: 535 -----PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
PDE+TYS ++E+ + + + + K M LSGC + + L+ + +
Sbjct: 435 EKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVG 494
Query: 590 LLEHAFDSL 598
E FD +
Sbjct: 495 DAEDIFDQM 503
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/464 (18%), Positives = 187/464 (40%), Gaps = 36/464 (7%)
Query: 143 VEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGD 202
+E P R + + L+ E + +M +SG T + L+ GL
Sbjct: 222 LEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCK 281
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
+G +A L ++Y +++ + + L+ L + G + L + + MLE
Sbjct: 282 EGRIEEA---LRFIY--EEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEK-GFEL 335
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ Y+S+ L ++G + E V+++ M + EP+ V YN ++
Sbjct: 336 DVYTYNSLISGLCKLGEIDEAVEILHHMVSRDC---------------EPNTVTYNTLIG 380
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+ + + + L G+ P T+ ++ + + ++ E F +M + G
Sbjct: 381 TLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDP 440
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
TY +L+ + E ++ EA+ ++ ME G VY L LC N R DA +
Sbjct: 441 DEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIF 500
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSR 501
++++ L S+ +T+ LI +++ + Q + + +P+ T MLK + +
Sbjct: 501 DQMEMLGVSRS-SVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQ 559
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+A ++ + T L+G +PD TY +++ A + + + +
Sbjct: 560 QGDIKRAADIVQNMT---------LNG----CEPDIVTYGTLIGGLCKAGRVDVASKLLR 606
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+ + G L + ++ + + F ++E G+ P
Sbjct: 607 SVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPP 650
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 188/460 (40%), Gaps = 60/460 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L++ L R A+ +L+ + YGL+ +T L+ + ALRI L
Sbjct: 205 LIRALCKAHQLRPAILMLEDMPNYGLRPDEK-----TFTTLMQGFIEEADVEGALRIKEL 259
Query: 254 MLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP-VLE 311
M+E C L SV+V + GL KE RI+ R ++
Sbjct: 260 MVESGCELT-------SVSVNVLVNGLCKE-------------GRIEEALRFIYEEEGFC 299
Query: 312 PDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
PD V +NA++N C H +G+ + L K G + TY + + + G+ D E
Sbjct: 300 PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEK-GFELDVYTYNSLISGLCKLGEIDEAVE 358
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
M +TY L+ +E + A R + +GV+ + L LC
Sbjct: 359 ILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLC 418
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNI 489
+ AM + E++K + P E T++ LI S + + + + + M+ C N+
Sbjct: 419 LTSNREIAMELFEEMKE-KGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNV 477
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTFLSG---------------- 528
N ++ +N+ A+++F++ +R++ + T ++G
Sbjct: 478 VVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQ 537
Query: 529 ---DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+G LKPD++TY++ML+ + + + M L+GC+ D + L+ +A
Sbjct: 538 MIMEG--LKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKA 595
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G+ + S+ G + P + +IQA+ + K
Sbjct: 596 GRVDVASKLLRSVQMKGMVLTPQAYNP-VIQALCKRKRTK 634
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 94/237 (39%), Gaps = 20/237 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL A + D + L R S Y L+ L K+ R EA ++ + M+
Sbjct: 483 LIDGLCKNNRVGDAEDIFDQMEMLGVSR---SSVTYNTLINGLCKSKRVEEAAQLMDQMI 539
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L PD Y ++ Q G +K +++ M EPD+V
Sbjct: 540 ME-GLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGC---------------EPDIV 583
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++ + + + + ++ G+ + Y ++ + + + FR+M
Sbjct: 584 TYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREM 643
Query: 376 AKSGEAIGALTYKVLVRAFWE-EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+ G+ +TYK++ R G I EAV M ++G++ + LA LC+
Sbjct: 644 MEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCS 700
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 153/350 (43%), Gaps = 38/350 (10%)
Query: 222 KRDLKSRFVYTK--LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
KRD K VYT LL L K R A ++ + + + PD+ +Y +V ++ ++G
Sbjct: 176 KRDGKEPNVYTYNILLKALCKNNRVDGACKLL-VEMSNKGCEPDVVSYTTVISSMSKLGK 234
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
++E +L R +P++ VYNA++N ++ K VF + Q
Sbjct: 235 VEEARELSIR--------------------FQPNVSVYNALINGFCREYKVKEVFLLLGQ 274
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + G+ P+ TY + + G +L + KM G + T+ L++ ++ G+
Sbjct: 275 MVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGR 334
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ EA+ M + G Y L LC++G+ +A+ V K++ P T+
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMER-NGCSPNVSTYG 393
Query: 460 GLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI G + I+ + M + C PN+ +M+ V R+ MFS+A L E+
Sbjct: 394 ALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK---- 449
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+S D P P+ T+++ ++ + + E ++ M GC
Sbjct: 450 -------MSTDNCP--PNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGC 490
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 168/370 (45%), Gaps = 37/370 (10%)
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
+ +V T +VGL ++ +K+ R+R+ +P + +YN +L+A +
Sbjct: 117 FINVINTYRRVGLAEQALKMFYRIREFGC---------------QPTVKIYNHLLDAMLS 161
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
++++ + ++ +++ G +P+ TY + ++ + ++ + D + +M+ G ++
Sbjct: 162 ENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVS 221
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y ++ + + GK+ EA R + R SVY L C + ++ L++ ++
Sbjct: 222 YTTVISSMSKLGKVEEA----RELSIR-FQPNVSVYNALINGFCREYKVKEVFLLLGQMV 276
Query: 447 SLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
+ P IT++ +ISS+ G G+++ ++++ M C PN+ T +++K Y M
Sbjct: 277 E-KGIDPNVITYS-TVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYF---M 331
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
+ E R G+ +P+ Y++++ + + V M
Sbjct: 332 RGRVLEALNIWNRMAEEGF----------EPNVVAYNTLIHGLCSHGKMGEAVSVSSKME 381
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 624
+GC + + + L+ ++AG ++ ++ G IP+ + +T M+ S +
Sbjct: 382 RNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFS 441
Query: 625 KAVALINAMA 634
+A +LI M+
Sbjct: 442 QAWSLIEKMS 451
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 178/425 (41%), Gaps = 79/425 (18%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ +L G+P EA IFN ++++ + P + Y ++ L + L K
Sbjct: 11 RIVRSR---TKLMNVLIGKGKPREAHSIFNSLMDEGH-KPTLITYTTLVAALTRQKLFKS 66
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+++LI ++ + K PD +++N+++NA S K +F+++++
Sbjct: 67 ILRLISKVEENGMK---------------PDSILFNSIINAFSESGNMKEAMKLFRKMKE 111
Query: 343 SGLKPSAATYGLAMEVMLQSGKYD---LVHEFFR-------------------------- 373
SG KP+ +T+ ++ +GK + + EF +
Sbjct: 112 SGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEE 171
Query: 374 ------KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
KM SG A+TY L RA+ E+G+ A + M R V +
Sbjct: 172 AWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVN 231
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI---ISSMDGGHIDDCISIFQHMKDH 484
C G DA V ++K L P F LI + +MD +D+ +++ + ++
Sbjct: 232 GYCKEGNMVDASRFVFRMKEL-GVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLME--ENG 288
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
P++ T + ++ +S K KE+F + +A ++PD + +S +
Sbjct: 289 VRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAE-------------IEPDIHAFSILA 335
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEA 601
+ A + E E + M G + ++ AGK +EHA ++ + E
Sbjct: 336 KGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGK---MEHAMKVYEKMCEI 392
Query: 602 GEIPH 606
G P+
Sbjct: 393 GVSPN 397
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 137/322 (42%), Gaps = 25/322 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ SE + K R M +SG T L+KG G+ G +A+ +L++ L+
Sbjct: 89 IINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEF---LQ 145
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D ++ Y L+ EA + M+ + PD Y+++A + G
Sbjct: 146 DGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVAS-GMQPDAVTYNTLARAYAEKGET 204
Query: 281 KELVKLIERM---RQKPSKR----IKNMHRKNWDPV-------------LEPDLVVYNAV 320
++I M R P++R I N + K + V + P+L V+N++
Sbjct: 205 IRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSL 264
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+ + + +GV V + ++G++P T+ M +G+ D E F M K+
Sbjct: 265 IKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEI 324
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ +L + + G+ +A + + +M + GV + + C+ G+ + AM
Sbjct: 325 EPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMK 384
Query: 441 VVEKIKSLRHSKPLEITFTGLI 462
V EK+ + S L+ T+ LI
Sbjct: 385 VYEKMCEIGVSPNLK-TYETLI 405
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 153/370 (41%), Gaps = 31/370 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L R +A+ + M + + PD+ Y ++ L + + V+L+ M
Sbjct: 116 YTTLMRALCAERRTGQAVGLLRDM-QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREM 174
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ +EP++VVY+ +L + +W+ V VF+++ G++P
Sbjct: 175 ---------------CESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVV 219
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y ++ + + GK + KM + G +TY VL+ + +EG + EA++ NM
Sbjct: 220 MYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM 279
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
++GV A Y L L +AM L+ E I +P +TF +I G
Sbjct: 280 LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTG 339
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ + M ++ C N+ T N ++ R KA EL +E SSG
Sbjct: 340 RMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMA---SSG------ 390
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
L+PD +TYS ++ Q + E + M G + + + LL G
Sbjct: 391 ----LEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMM 446
Query: 589 HLLEHAFDSL 598
+ FD +
Sbjct: 447 EQARNFFDEM 456
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 112/273 (41%), Gaps = 22/273 (8%)
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEP-----------DLVVYNAVLNA-CVPSHQW 330
L L+ R R + S R+ + R P+ E D V YN VL A C
Sbjct: 38 LAVLLRRGRAEASARLNRLLR--LVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCL 95
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
++ + + +P+A +Y M + + R M SG +TY L
Sbjct: 96 DAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTL 154
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+R + +++AV +R M + G+ VY L C GRW+ V E++ S R
Sbjct: 155 IRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM-SGRG 213
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT----VNAMLKVYSRNDMF 505
+P + +TGLI S G + + M + EPN+ T +N+M K S +
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273
Query: 506 SKAKELFEETTRANSSGY-TFLSGDGAPLKPDE 537
S + E+ ++ Y T ++G L+ DE
Sbjct: 274 SLRNNMLEKGVALDAVTYNTLITGLSGVLEMDE 306
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 143/373 (38%), Gaps = 68/373 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ L +G ++A V+D + +R L+ V Y L+ + K G EA+ + N M
Sbjct: 224 LIDSLCREGKVKKATQVMDKMM----ERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM 279
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
LE + D Y+++ L V + E + L+E M +H + ++EP++
Sbjct: 280 LEK-GVALDAVTYNTLITGLSGVLEMDEAMGLLEEM----------IH---GETMVEPNV 325
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V +N+V++ + + + F V + ++G + T+ L + +L+ K E +
Sbjct: 326 VTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDE 385
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
MA SG + TY +L+ F + +++ A + + M + G+ Y L LC G
Sbjct: 386 MASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGM 445
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA 494
+ A + F M +C+ ++ +
Sbjct: 446 MEQAR------------------------------------NFFDEMHKNCKLDVVAYST 469
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
M+ R A+E + L PD TYS ++ A +
Sbjct: 470 MIHGACRLRDRKSAEEFLKHMLDEG-------------LIPDSVTYSMLINMFANSGDLG 516
Query: 555 YFEYVYKGMALSG 567
E V K M SG
Sbjct: 517 AAERVLKQMTASG 529
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 93/258 (36%), Gaps = 27/258 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
++ GL G RQA V D + + V LL +G R H+ + LM
Sbjct: 331 VIHGLCKTGRMRQAFQVRDMMA----ENGCACNLVTFNLL--IGGLLRVHKVKKAMELMD 384
Query: 255 -LEDCNLYPDIAAY----------------HSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
+ L PD Y S+ + + G+ ELV I + +
Sbjct: 385 EMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQG 444
Query: 298 IKNMHRKNWDPV---LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ R +D + + D+V Y+ +++ K K + GL P + TY +
Sbjct: 445 MMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSM 504
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + SG ++M SG + L++ + +G + + +R M +
Sbjct: 505 LINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKD 564
Query: 415 VVGTASVYYELACCLCNN 432
+ + + + CL N
Sbjct: 565 IALDSKIISTIYTCLVAN 582
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 155/354 (43%), Gaps = 46/354 (12%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P++ Y ++ T Q + V++++ MR++ + PD YN+++
Sbjct: 453 PNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQG---------------IAPDTFCYNSLI 497
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + ++ ++G KP A TYG + +++G++ ++ ++M + G
Sbjct: 498 IGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVI 557
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+ L+ + ++GK+ EA +A R+M ++G++G A Y L L NG+ DA +
Sbjct: 558 PNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEI 617
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
+++ + P ++ LI G++ SIF M + N+ N +L +
Sbjct: 618 FHEMRG-KGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFC 676
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA----TAHQWEYF 556
R+ KAKEL +E +SG G P P+ TY ++++ A ++ F
Sbjct: 677 RSGEIEKAKELLDE-----------MSGKGFP--PNAVTYCTIIDGYCKSGDLAEAFQLF 723
Query: 557 E-----------YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
+ +VY + C+L+ + A + E + G C F++L+
Sbjct: 724 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKG-CASSSAPFNALI 776
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/436 (19%), Positives = 163/436 (37%), Gaps = 54/436 (12%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ ++ + T L+ K G+ EA F M+E + D Y + L + G + +
Sbjct: 557 IPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQ-GILGDAKTYTVLMNGLVKNGKVNDAE 615
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
++ MR K + PD+ Y +++ + +F ++ ++G
Sbjct: 616 EIFHEMRGKG---------------IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAG 660
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
L + Y + + +SG+ + E +M+ G A+TY ++ + + G + EA
Sbjct: 661 LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAF 720
Query: 405 AAVRNMEQRGVVGTASVYYEL--ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
M+ +G+V + VY L CC N+ + + S P F LI
Sbjct: 721 QLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAP----FNALI 776
Query: 463 ISSMDGGHIDDCISIFQHMKDHC-----EPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
G + + + D +PN T N M+ + AKELF +
Sbjct: 777 NWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQK 836
Query: 518 AN-----------SSGY-----------TFLSGDGAPLKPDEYTYSSMLEA----SATAH 551
AN +GY F A ++PD YS ++ A T
Sbjct: 837 ANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTK 896
Query: 552 QWEYFEYVYKGMAL-SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ ++ A+ GC+L + LL ++ G+ + E ++++ IP
Sbjct: 897 ALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTV 956
Query: 611 TEMLIQAIVQSNYEKA 626
E++ ++ + SN A
Sbjct: 957 IELINESCISSNQRMA 972
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 115/326 (35%), Gaps = 24/326 (7%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F + G+ P A Y +E + +E ++ K I TY V+
Sbjct: 372 LFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMC 431
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G ++ A V+ M G +Y L R+ DA+ V+++++ + P
Sbjct: 432 SSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMRE-QGIAPDT 490
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KE 510
+ LII +D+ S M ++ +P+ T A + Y F+ A KE
Sbjct: 491 FCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKE 550
Query: 511 LFEETTRANSSGYT------------------FLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ E N T F S + D TY+ ++ +
Sbjct: 551 MLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGK 610
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
E ++ M G D + L+ S+ G FD +++AG + + +
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNM 670
Query: 613 MLIQAIVQSNYEKAVALINAMAYAPF 638
+L EKA L++ M+ F
Sbjct: 671 LLGGFCRSGEIEKAKELLDEMSGKGF 696
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 89/221 (40%), Gaps = 16/221 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G +A + D +K K + FVYT L+ + A+ IF
Sbjct: 706 IIDGYCKSGDLAEAFQLFDE---MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNE 762
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ C A ++++ + + G + +I R+ ++D +P+ V
Sbjct: 763 KGCA--SSSAPFNALINWVFKFGKTELTTDMINRLMDG-----------SFDKFGKPNDV 809
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +++ + +F ++K+ L P+ TY + + G+ + F ++
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEV 869
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+G + Y V++ AF +EG +A+ + M + V
Sbjct: 870 IAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAV 910
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 166/385 (43%), Gaps = 34/385 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G+ ++G + A+ + + + + D+ S Y L+ L +G + A+ +F M
Sbjct: 169 LINGVCNEGKIKVAVELYNEMVRSGHEPDVIS---YNTLINGLCNSGNTNMAVHVFKKM- 224
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E P++ Y+++ +L + L+ + + + M + + PD +
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG---------------IPPDAI 269
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN++++ Q +FK++ ++G KP TY + ++ + + + +F +M
Sbjct: 270 TYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEM 329
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +TY ++ G++NEA+ + MEQ+G Y + LC +
Sbjct: 330 VDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLV 389
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
DAM + ++ R P +T++ ++ + G +D+ +F+ M + PN T +
Sbjct: 390 NDAMEFLSEMVD-RGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + M S+A+ +FE T ++P+ YTY++++ +
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKG-------------VEPNIYTYNALMNGYCLRCKMN 495
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLL 579
V++ M GC D + L+
Sbjct: 496 EARKVFEIMVGKGCAPDLHSYNILI 520
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 104/245 (42%), Gaps = 15/245 (6%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V+ ++ K G++P T+ + + GK + E + +M +SG ++Y L+
Sbjct: 150 VWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLC 209
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G N AV + MEQ G Y + LC + DAM + ++ R P
Sbjct: 210 NSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVG-RGIPPDA 268
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
IT+ ++ G +++ +F+ M ++ C+P++ T N ++ ++ + + A + E
Sbjct: 269 ITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSE 328
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ G P PD TY+++L Q ++K M GC+ D
Sbjct: 329 -----------MVDQGIP--PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVA 375
Query: 575 HAWLL 579
+ ++
Sbjct: 376 YNTII 380
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 36/337 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT +L L G+ +EA+R+F M E PD+ AY+++ +L + L+ + ++ + M
Sbjct: 341 YTTILHGLCYLGQLNEAIRLFKKM-EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEM 399
Query: 291 --RQKPSKRIK---------NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF----- 334
R P + N+ + + L ++V N + N S G+
Sbjct: 400 VDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMV 459
Query: 335 ----WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
WVF+ + + G++P+ TY M K + + F M G A +Y +L
Sbjct: 460 SEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNIL 519
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ + ++++A A + M + + Y + LC GR DA + +K+ S
Sbjct: 520 INGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCS-SG 578
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAK 509
P +T++ L+ GH+D+ + +F+ MK+ EP+I +++ AK
Sbjct: 579 MLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAK 638
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
LF + LS DG ++P TY+ M++
Sbjct: 639 GLFSK-----------LSADG--IQPPGRTYNVMIKG 662
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/332 (17%), Positives = 133/332 (40%), Gaps = 48/332 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++PD++ + ++N + K ++ ++ +SG +P +Y + + SG ++
Sbjct: 159 IQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAV 218
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F+KM ++G +TY ++ + ++ +N+A+ + M RG+ A Y + L
Sbjct: 219 HVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGL 278
Query: 430 CNNGRWQDAMLVVEK----------------IKSLRHSK------------------PLE 455
C G+ +A + ++ I SL + P
Sbjct: 279 CCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDV 338
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+T ++ G +++ I +F+ M+ C+P++ N ++ ++ + + A E E
Sbjct: 339 VTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE 398
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ G P P+ TYS++L Q + ++K M +
Sbjct: 399 -----------MVDRGIP--PNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLT 445
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ L+ + G F+++ E G P+
Sbjct: 446 FSILVDGLCQEGMVSEARWVFETMTEKGVEPN 477
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 19/266 (7%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+K + + A ++D L + + +F+ M G+ +L G + G
Sbjct: 366 QKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLD 425
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A + + G + + + ++ L+ L + G EA +F M E + P+I Y
Sbjct: 426 EATQLFKEMVG---RNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEK-GVEPNIYTY 481
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+++ + E K+ E M K PDL YN ++N S
Sbjct: 482 NALMNGYCLRCKMNEARKVFEIMVGKGC---------------APDLHSYNILINGYCNS 526
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + Q+ L P+ TY M+ + G+ E F+KM SG +TY
Sbjct: 527 RRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTY 586
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQR 413
+L+ + G ++EA+ ++M+++
Sbjct: 587 SILLNGLCKHGHLDEALKLFKSMKEK 612
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 141/384 (36%), Gaps = 59/384 (15%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V + L + Q+ V ++ Q+ G+ + + + + + + D
Sbjct: 91 PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSV 150
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+ KM K G +T+ L+ EGKI AV M + G Y L LCN
Sbjct: 151 WGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCN 210
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
+G A+ V +K++ ++ C+PN+ T
Sbjct: 211 SGNTNMAVHVFKKME-----------------------------------QNGCKPNVVT 235
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ ++ + + A + E + G G P PD TY+S++
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSE-----------MVGRGIP--PDAITYNSIVHGLCCLG 282
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPL 608
Q ++K M +GC+ D + ++ K L+ A D L ++ G P +
Sbjct: 283 QLNEATRLFKRMEQNGCKPDVVTYNIII---DSLYKDRLVNDAADFLSEMVDQGIPPDVV 339
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES-NEDRISRDKLEKLLNA 667
+T +L +A+ L M + + +S +DR+ D +E L+
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAME-FLSE 398
Query: 668 LCNCNAASSEITVSNLSRALHALC 691
+ + + +T S + LH C
Sbjct: 399 MVDRGIPPNAVTYSTI---LHGFC 419
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 137/304 (45%), Gaps = 24/304 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT ++ I+G+ G + IF M E+ ++ ++ A+ ++ G+ G + + L+ R
Sbjct: 84 IYTIMIGIMGREGLLEKCSEIFEDMPEN-DVKWNVYAFTALINAYGRNGQYEASLHLLAR 142
Query: 290 M---RQKPS----KRIKNMHRK---NWDPVL-----------EPDLVVYNAVLNACVPSH 328
M R +P+ + N K +W+ +L +PDL+ YN +L+AC
Sbjct: 143 MKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRG 202
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ VFK + +SG+ A TY ++ S + V E R+M G + Y
Sbjct: 203 LVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYN 262
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ A+ + G ++ A + M++ G Y L N G ++ + +K L
Sbjct: 263 SLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKEL 322
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
+ P T+ LI +GG+ + I++F M D +P+ T +A+L V R + +
Sbjct: 323 -STPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTRE 381
Query: 508 AKEL 511
A ++
Sbjct: 382 AAKI 385
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 101/535 (18%), Positives = 203/535 (37%), Gaps = 59/535 (11%)
Query: 139 FAKNVEWH---------PEKRWRSEAEAIRVLVDRLSERE-MTAKNWKFVRIMNQSGLMF 188
FA +WH ++W E I ++ + RE + K + M ++ + +
Sbjct: 56 FAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKW 115
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
L+ G G + ++ +L +K +R + Y +L K G E L
Sbjct: 116 NVYAFTALINAYGRNGQYEASLHLLAR---MKKERVEPNLITYNTVLNACSKGGLDWEGL 172
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS------------- 295
+ + PD+ Y+++ GL+++ + + M +
Sbjct: 173 LNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDT 232
Query: 296 -------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R++ + R+ D PD+ YN+++ A + G VFKQ+++ G P
Sbjct: 233 FAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPD 292
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + G ++ V F M + TY L++ F E G E++
Sbjct: 293 VETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFH 352
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDA------MLVVEKIKSLRHSKPLEITFTGLI 462
+M GV + Y L G ++A ML E SL S L ++ +
Sbjct: 353 DMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMA 412
Query: 463 ISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ + D +S ++ + +P + +A+++ Y++ ++ +A G
Sbjct: 413 M------YKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEA-------------G 453
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEA-SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
T + + A + + +S++EA S E E+ + G ++D+ H LL
Sbjct: 454 STLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGV 513
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
G + F + E ++P + +L + +S ++ A L++ M A
Sbjct: 514 YCDMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQLLDEMIAA 568
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 176/413 (42%), Gaps = 51/413 (12%)
Query: 190 EGQMLK-LLKGLGDKGSWRQAMSVLDWVYG--LKDKRDLKSRFVYTKLLAILGKAGRPHE 246
+GQ+L ++ G G +AMS L V G L K ++ LG AGR E
Sbjct: 326 DGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTA-----TLVAVITALGNAGRTEE 380
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKPSKRIKNM-- 301
A IF L++ L P AY+++ + G LK+ +V +ER P + ++
Sbjct: 381 AEAIFE-ELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLI 439
Query: 302 ----HRKNWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ W+ + P+ V++ +L + +W+ F V +++R SG+
Sbjct: 440 DAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVS 499
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P Y + ++ + D F +M G A+T+ L+ + G N+A
Sbjct: 500 PDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEEL 559
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M++ G + Y + RW+D ++ K++S + +T+T L +S
Sbjct: 560 FEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANV-VTYTTLGLS-- 616
Query: 467 DGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
+ I+ F+ M+ D +P++ +N+++ + + ++A + + +
Sbjct: 617 -----EQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKEND------ 665
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
LKPD TY+++++A +++ VY+ M LSGC D+ A L
Sbjct: 666 -------LKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAML 711
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/428 (18%), Positives = 172/428 (40%), Gaps = 50/428 (11%)
Query: 184 SGLMFTEGQMLK------------LLKGL-GDKGSWRQAMSVLDWVYGLKDKRDL--KSR 228
+ L FTE Q+++ LLK L D S A S++ W+ ++ +L
Sbjct: 170 TSLDFTEFQLVESYRAVPAPLWHSLLKSLCSDSSSIGTAYSLVTWL----ERHNLCFSYE 225
Query: 229 FVYTKLLAILGKAGRPHEALRI----------FNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+Y+ L+ LG++ + +EA + +N ++ C D+ ++ + + G
Sbjct: 226 LLYSILIHALGRSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDG 285
Query: 279 LLKELVKL------IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
+ V + R + S ++ ++ + +E D + N ++ S
Sbjct: 286 YPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNR 345
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
++ +GL P AT + + +G+ + F ++ + G Y L++
Sbjct: 346 AMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLK 405
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
+ + G + +A + V ME+ G Y L N GRW+ A +V++++++ +
Sbjct: 406 GYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEA-SGVR 464
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P F+ ++ S D G + + M++ P+ N M+ + + + A
Sbjct: 465 PNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALAT 524
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F+ R G ++PD T++++++ + E +++ M SGC
Sbjct: 525 FD---RMRMEG----------VQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPC 571
Query: 572 QTKHAWLL 579
T + ++
Sbjct: 572 TTTYNIMI 579
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/372 (18%), Positives = 142/372 (38%), Gaps = 56/372 (15%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD--LVHEFF 372
+ YNA++ AC + + + ++R+ G Y ++ + ++ K D ++ + +
Sbjct: 256 LTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 315
Query: 373 RKM-AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
++ + E G L ++V F + G +N A++ + ++ G+
Sbjct: 316 AEIESDKIELDGQLLNDIIV-GFAKSGDVNRAMSFLAMVQGNGL---------------- 358
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
P T +I + + G ++ +IF+ +K+ P
Sbjct: 359 --------------------SPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTR 398
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
NA+LK Y + A+ + E R SG++ PDE+TYS +++A A A
Sbjct: 399 AYNALLKGYVKTGSLKDAESIVSEMER---SGFS----------PDEHTYSLLIDAYANA 445
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+WE V K M SG + + + +L GK + +G P F+
Sbjct: 446 GRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFY 505
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL-- 668
M+ + + A+A + M W L + + +K E+L A+
Sbjct: 506 NVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQE 565
Query: 669 CNCNAASSEITV 680
C+ ++ +
Sbjct: 566 SGCSPCTTTYNI 577
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 149/343 (43%), Gaps = 36/343 (10%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
R + S+ VY ++ R + + + AG+PH A+++F L + + D+ +
Sbjct: 115 RDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVF-LSMHQFGCFQDLQS 173
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR--KNWDPVLEPDLVVYNAVLNAC 324
++++ L + SKR++ + K + D V YN ++N
Sbjct: 174 FNTILDVLCK------------------SKRVEMAYNLFKVFKGKFRADCVSYNVMVNGW 215
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + K++ K GL P+ +Y ++ ++G+ + +FF +M K I
Sbjct: 216 CLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDV 275
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+TY ++ F G+I A M ++GV+ + + Y LC +A+++ E+
Sbjct: 276 ITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEE 335
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 503
+ ++ P IT+ +I G ++ + MKD CEPN+ T N +++ +
Sbjct: 336 M-VVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEG 394
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
KA +LF++ T SGD P+ TY+ ++ A
Sbjct: 395 EIDKALDLFQKMT----------SGDCL---PNLDTYNILISA 424
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 116/273 (42%), Gaps = 28/273 (10%)
Query: 150 RWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
++R++ + V+V+ + T K + ++ M + GL +LKG G +A
Sbjct: 200 KFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEA 259
Query: 210 MSVLDWVYGLK-DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
W + L+ KRD + + YT ++ G AG A ++F+ M++ + P +A Y
Sbjct: 260 -----WDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKK-GVLPSVATY 313
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ L + + + + E M K P+ + YN V+
Sbjct: 314 NAFIQVLCKKDNVDNAIVIFEEMVVKG---------------YVPNSITYNLVIRGLCHR 358
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL-T 386
+ + +++ G +P+ TY L + G+ D + F+KM SG+ + L T
Sbjct: 359 GEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMT-SGDCLPNLDT 417
Query: 387 YKVLVRAFWEEGKINEAVAA---VRNMEQRGVV 416
Y +L+ A + K ++ + A + M RG V
Sbjct: 418 YNILISAMFVRKKSDDLLVAGNLLIEMVDRGFV 450
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/502 (21%), Positives = 202/502 (40%), Gaps = 53/502 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLM---FTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+ L + + F + M GL+ FT G L+ GL +A ++LD +
Sbjct: 262 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYG---ALINGLCKSRRSNEAKALLDEM 318
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ K ++ VY L+ + G EA ++ M+ + P+ Y ++ L +
Sbjct: 319 SCAELKPNV---VVYANLIDGFMREGNADEAFKMIKEMVA-AGVQPNKITYDNLVRGLCK 374
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
+G + L+++M +++ HR PD + YN ++ H K F +
Sbjct: 375 MGQMDRASLLLKQM-------VRDSHR--------PDTITYNLIIEGHFRHHSKKDAFRL 419
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
++ +G+ P+ TY + + + QSG+ + + +M G A Y L+ +
Sbjct: 420 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 479
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
EG ++ A M + V+ Y L L GR +++ +++ R P E
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE-RGLLPNEF 538
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T++GLI + G ++ + Q M D +PN +L+ Y ++D K F+
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598
Query: 516 T----------------RANSSG-----YTFLSG---DGAPLKPDEYTYSSMLEASATAH 551
+SSG + LSG +G+ PD + YSS++
Sbjct: 599 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGS--VPDVHVYSSLISGLCKTA 656
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
E + M+ G + + L+ ++G + F+S+L G +P+ + +T
Sbjct: 657 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 716
Query: 612 EMLIQAIVQSNYEKAVALINAM 633
++ + + A L N M
Sbjct: 717 SLIDGSCKVGDISNAFYLYNEM 738
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 149/393 (37%), Gaps = 71/393 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ GL G +A +L+ + GLK + FVY L++ + G A IF+
Sbjct: 438 MIHGLCQSGEPEKASDLLEEMTTKGLK-----PNAFVYAPLISGYCREGNVSLACEIFDK 492
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + N+ PD+ Y+S+ L +VG ++E K +M+++ L P+
Sbjct: 493 MTK-VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG---------------LLPN 536
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
Y+ +++ + + + + +++ +GLKP+ Y +E +S + V F+
Sbjct: 537 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 596
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
M G + Y +L+ G + A + +E+ G V VY L LC
Sbjct: 597 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA 656
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 493
+ A +++++ K +PNI N
Sbjct: 657 DREKAFGILDEMS-----------------------------------KKGVDPNIVCYN 681
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A++ ++ S A+ +F L P+ TY+S+++ S
Sbjct: 682 ALIDGLCKSGDISYARNVFNSILAKG-------------LVPNCVTYTSLIDGSCKVGDI 728
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
Y+Y M +G D ++ L S AG
Sbjct: 729 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 761
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 133/353 (37%), Gaps = 18/353 (5%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+ V YN ++ S + F K + GL P TYG + + +S + +
Sbjct: 256 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 315
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M+ + + Y L+ F EG +EA ++ M GV Y L LC
Sbjct: 316 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 375
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 491
G+ A L+++++ H +P IT+ +I D + M++ PN+ T
Sbjct: 376 GQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 434
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+ M+ ++ KA +L EE T LKP+ + Y+ ++
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKG-------------LKPNAFVYAPLISGYCREG 481
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
++ M D + L+ S+ G+ F + E G +P+ ++
Sbjct: 482 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 541
Query: 612 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 664
++ + + E A L+ M + + +L ES D +EK+
Sbjct: 542 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES---YFKSDDIEKV 591
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 114/277 (41%), Gaps = 24/277 (8%)
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
+G A+E + ++D + +M + G + +TY VL+ G + EA ++ME
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
G+V Y L LC + R +A +++++ S KP + + LI M G+
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM-SCAELKPNVVVYANLIDGFMREGNA 343
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTFL 526
D+ + + M +PN T + +++ + +A K++ ++ R ++ Y +
Sbjct: 344 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403
Query: 527 ------------------SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+ A + P+ YTYS M+ + + E + + M G
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+ + +A L+ R G L FD + + +P
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 500
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 3/210 (1%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ VY+++++ + + F + ++ K G+ P+ Y ++ + +SG
Sbjct: 640 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 699
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F + G +TY L+ + G I+ A M G+ A VY L +
Sbjct: 700 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 759
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIG 490
G + AM ++E++ LR + +F L+ G + + + + M PN
Sbjct: 760 AGDLEQAMFLIEEM-FLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 817
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANS 520
T+ ++ S S+ +F E + S
Sbjct: 818 TIENIISGLSEAGKLSEVHTIFVELQQKTS 847
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 99/257 (38%), Gaps = 43/257 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A +V + + K + + YT L+ K G A ++N ML
Sbjct: 683 LIDGLCKSGDISYARNVFNSILA---KGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 739
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--------------------RQKPS 295
+ PD Y + G L++ + LIE M R K
Sbjct: 740 AT-GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQ 798
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ +K +H ++ L + N +++ + + V +F +L++ + +A +
Sbjct: 799 ETLKLLHVIMGRGLVPNALTIEN-IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL 857
Query: 356 MEVMLQSGKY--DLVHEFFRKMAKSGE----------------AIGALTYKVLVRAFWEE 397
M+ GK D+V + R K G +G +Y +V +
Sbjct: 858 FMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRK 917
Query: 398 GKINEAVAAVRNMEQRG 414
GK++EA+ ++ M++RG
Sbjct: 918 GKLSEALNLLKEMDKRG 934
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 147/353 (41%), Gaps = 37/353 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L K GR EA +IF+ M + L PDIA Y ++ G L E+ L++ M
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKR-GLEPDIATYCTLLQGYATKGALVEMHALLDLM 362
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + PD V+N ++ A + VF ++R+ GL P+
Sbjct: 363 VRNG---------------IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYG + ++ +SG D +F +M G + Y L+ + K ++A + M
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEITFTGLIISSMD 467
RG+ + + C GR ++ EK+ L KP IT++ LI
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIES----EKLFDLMVRIGVKPNVITYSTLIDGYCL 523
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +D+ + M +P+ T N ++ Y R A LF+E SSG
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMV---SSG---- 576
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ P+ TY+ +L+ + + +Y G+ SG QL+ + + +L
Sbjct: 577 ------VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 159/370 (42%), Gaps = 21/370 (5%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R EA L+ L + T+ V R M + M LLKGL D+
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + YT ++ K G +A ++ ML D + PD+
Sbjct: 175 QEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML-DRRISPDVVT 233
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ L + + + ++++ M +KN + P+ + YN++L+
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTM-------VKNG--------VMPNCMTYNSILHGYCS 278
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
S Q K K++R G++P TY M+ + ++G+ + F M K G T
Sbjct: 279 SEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIAT 338
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L++ + +G + E A + M + G+ V+ L C + +AMLV K++
Sbjct: 339 YCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398
Query: 447 SLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 504
+H P +T+ +I G +DD + F+ M D PNI +++ D
Sbjct: 399 --QHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456
Query: 505 FSKAKELFEE 514
+ KA+EL E
Sbjct: 457 WDKAEELILE 466
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K GR E+ ++F+LM+ + P++ Y ++ G + E KL+ M
Sbjct: 488 KEGRVIESEKLFDLMVR-IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM--------- 537
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ ++PD V YN ++N + +FK++ SG+ P+ TY + ++ +
Sbjct: 538 ------FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ + E + + KSG + TY +++ + +EA+ +N+
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/322 (19%), Positives = 127/322 (39%), Gaps = 20/322 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TYG+ + ++G+ DL + K G
Sbjct: 60 VARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFR 119
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+T+ L++ + + ++A+ V R M + + L LC+ R Q+A+
Sbjct: 120 VEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 179
Query: 441 VVEKIKSLR--HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK 497
++ + R S P +++T +I G D S + M D P++ T ++++
Sbjct: 180 LLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIA 239
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
+ KA E+ + + P+ TY+S+L ++ Q +
Sbjct: 240 ALCKGQAMDKAMEVLTTMVKNG-------------VMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
K M G + D + L+ + G+ FDS+ + G P + +L
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 618 IVQSNYEKAVALINAMAYAPFH 639
+ + AL++ M H
Sbjct: 347 ATKGALVEMHALLDLMVRNGIH 368
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 69/377 (18%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ IL K+G +A+ F M+++ L P+I Y S+ +L + +LI M
Sbjct: 409 YGAVIGILCKSGSVDDAMLYFEQMIDE-GLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467
Query: 291 RQKPS-------KRIKNMHRKNWDPV-------------LEPDLVVYNAVLNACVPSHQW 330
+ I + H K + ++P+++ Y+ +++ + +
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ + G+KP TY + + + D F++M SG + +TY ++
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
++ + + A + + G S Y + LC N +A+ + + +
Sbjct: 588 LQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL----- 642
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
C++ Q IG A+LKV RND +AK+
Sbjct: 643 -----------------------CLTDLQLETRTFNIMIG---ALLKV-GRND---EAKD 672
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
LF S +G L P+ +TY M E E + ++ M +GC +
Sbjct: 673 LF-----------VAFSSNG--LVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTV 719
Query: 571 DQTKHAWLLVEASRAGK 587
D +++ E + G+
Sbjct: 720 DSGMLNFIVRELLQRGE 736
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 180/430 (41%), Gaps = 42/430 (9%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+SVL + L + D + + L ++GK G EAL +F+ M+ + P++ Y
Sbjct: 110 ALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIG---EALDVFDKMVGE-GFQPNVVTYG 165
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L + L E + L M K + PD+ YN++++A
Sbjct: 166 TLMNGLCKDRQLTEALNLFSEMIAKG---------------ISPDIFTYNSLIHALCNLC 210
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+WK V + ++ KS + P+ + + ++ + + GK H+ M + G +TY
Sbjct: 211 EWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYA 270
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ +++EAV M + G V Y L C R AM + E++
Sbjct: 271 ALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCR- 329
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSK 507
+ P +T++ LI G + D I++F M + PN+ T + +L +N ++
Sbjct: 330 QELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAE 389
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A L + +G+ L PD Y+ ++ A E ++ +A G
Sbjct: 390 AMALLKAI-------------EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG 436
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSN-Y 623
Q D H ++ + G LL+ A F + E G + + + + Q ++Q+N
Sbjct: 437 LQPDVWTHNIMIRGLCKRG---LLDEASKLFREMDENGCLRNGCTYNT-ITQGLLQNNKT 492
Query: 624 EKAVALINAM 633
+A+ L+ M
Sbjct: 493 SRAIQLLEEM 502
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 131/316 (41%), Gaps = 21/316 (6%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
++ ++VD L + + V +M Q G+ L+ G + +A+ V D +
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
++ S Y L+ K R +A+ +F M L P+ Y ++ L
Sbjct: 293 VRNGCVCNVVS---YNTLINGYCKIQRIDKAMYLFEEMCRQ-ELIPNTMTYSTLIHGLCH 348
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
VG L++ + L M +I P+LV Y+ +L+ +H+ +
Sbjct: 349 VGRLQDAIALFNEMVA--CGQI-------------PNLVTYSILLDYLCKNHRLAEAMAL 393
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
K + S L P Y +A++ M ++G + + F +A G T+ +++R +
Sbjct: 394 LKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCK 453
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G ++EA R M++ G + Y + L N + A+ ++E++ + S ++
Sbjct: 454 RGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSA--DV 511
Query: 457 TFTGLIISSMDGGHID 472
+ T L++ + +D
Sbjct: 512 STTALLVKMLSDDGLD 527
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 48/272 (17%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD+ V+N+ ++ V ++ K G +P AT+ + + GK
Sbjct: 87 IPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEAL 146
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ F KM G +TY L+ ++ ++ EA+ M +G+ Y L L
Sbjct: 147 DVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHAL 206
Query: 430 CNNGRWQDA-MLVVEKIKS--LRHSKPLEITFTGLI------------------------ 462
CN W+ L+ E +KS + + L I L
Sbjct: 207 CNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDV 266
Query: 463 ---ISSMDG----GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+ MDG +D+ + +F M ++ C N+ + N ++ Y + KA LFEE
Sbjct: 267 VTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEE 326
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
R L P+ TYS+++
Sbjct: 327 MCRQE-------------LIPNTMTYSTLIHG 345
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/324 (16%), Positives = 122/324 (37%), Gaps = 15/324 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P + + +L + + V + K++ G+ P T + + + D
Sbjct: 54 PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G T+ LVR GKI EA+ M G Y L LC
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+ + +A+ + ++ + + P T+ LI + + ++ M K PN+
Sbjct: 174 DRQLTEALNLFSEMIA-KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV 232
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
++N ++ + ++A ++ + + ++PD TY+++++
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGG-------------VEPDVVTYAALMDGHCLR 279
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ + V+ M +GC + + L+ + + + F+ + IP+ + +
Sbjct: 280 SEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTY 339
Query: 611 TEMLIQAIVQSNYEKAVALINAMA 634
+ ++ + A+AL N M
Sbjct: 340 STLIHGLCHVGRLQDAIALFNEMV 363
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/518 (22%), Positives = 202/518 (38%), Gaps = 101/518 (19%)
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL------LAILG 239
L F + QMLK+ G++ +++ +L+ + D+ + TKL L +
Sbjct: 85 LGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV---ILCTKLIKGFFTLRNIP 141
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KA R E L F PD+ AY+++ ++ + + ++++RMR K
Sbjct: 142 KAVRVMEILEKFG--------QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD----- 188
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
PD V YN ++ + + V QL +P+ TY + +E
Sbjct: 189 ----------FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ G D + +M G TY ++R +EG ++ A VRN+E +G
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDV 298
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y L L N G+W++ ++ K+ S P +T++ LI + G I++ +++ +
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 480 HMK------------------------------------DHCEPNIGTVNAMLKVYSRND 503
MK D C P+I N +L +N
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 504 MFSKAKELF----EETTRANSSGYTFL------SGD------------GAPLKPDEYTYS 541
+A E+F E NSS Y + SGD + PDE TY+
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 542 SMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDS 597
SM+ E FE + + + C+ + + +V K H +E A +S
Sbjct: 478 SMISCLCREGMVDEAFELL---VDMRSCEFHPSVVTYNIVLLGFC-KAHRIEDAINVLES 533
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSNYE-KAVALINAMA 634
++ G P+ +T +LI+ I + Y +A+ L N +
Sbjct: 534 MVGNGCRPNETTYT-VLIEGIGFAGYRAEAMELANDLV 570
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 122/534 (22%), Positives = 209/534 (39%), Gaps = 68/534 (12%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
TA + +R M + + + ++ GL GS A ++ + + K D+ +
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI---II 284
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ AGR + ++ M++ + PD+ A+ ++ + G L+E +L + M
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ + PD V Y ++++ +Q + + G P+
Sbjct: 344 IQRG---------------ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + + ++ D E FRKM+ G +TY L++ F E GK+ A + M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGG 469
R V Y L LC+NG + A+ + EKI+ + L+I +II M +
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE--KSKMELDIGIYNIIIHGMCNAS 506
Query: 470 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+DD +F + +P++ T N M+ + S+A LF + S
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS------- 559
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG-- 586
P+ TY+ ++ AH E D TK A L+ E R G
Sbjct: 560 ------PNGCTYNILIR----AHLGEG---------------DATKSAKLIEEIKRCGFS 594
Query: 587 -KCHLLEHAFDSL---LEAGEIPHPLFFTEMLIQAIVQSN---YEKAVALIN--AMAYAP 637
L A +L L+AG P FT +L ++ N Y+ N AM Y P
Sbjct: 595 VDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKP 654
Query: 638 FHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA-LHA 689
+T + L N L+++ C NA + +S L + LH
Sbjct: 655 NVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHG 708
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 142/355 (40%), Gaps = 67/355 (18%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD + ++ L G + E ++L++RM + K P L+ NA++
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK---------------PTLITLNALV 184
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N + + + ++ ++G +P+ TYG ++VM +SG+ L E RKM +
Sbjct: 185 NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIK 244
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD-AML 440
+ A+ Y +++ ++G ++ A ME +G +Y L C GRW D A L
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 441 VVEKIKSLRHSKPLEITFTGLI-------------------------------ISSMDGG 469
+ + IK R P + F+ LI S +DG
Sbjct: 305 LRDMIK--RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 470 HIDDCISIFQHMKD-----HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
++ + HM D C PNI T N ++ Y + ++ ELF + +
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS-------- 414
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
L G + D TY+++++ + E + +++ M + D + LL
Sbjct: 415 -LRG----VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 138/335 (41%), Gaps = 27/335 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P L+ ++ + + + Q+ V + KQ+ G+ + T + + + K L
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G +T+ L+ EG+++EA+ V M + G T L LC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK------DHC 485
NG+ DA+L+++++ +P E+T+ ++ G + + + M+ D
Sbjct: 190 NGKVSDAVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL------SG---DGAPL--- 533
+ +I ++ + K S ++ F+ E+ + +A+ YT L +G DGA L
Sbjct: 249 KYSI-IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 534 ------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
PD +S++++ + E ++K M G D + L+ + +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
H D ++ G P+ F +LI ++N
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTF-NILINGYCKAN 401
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 140/320 (43%), Gaps = 21/320 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + G W +L + G + + ++ L+ + K G+ EA ++N M+
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIG---RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD Y+S+ + L E ++ + M K EPD+V
Sbjct: 343 TR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC---------------EPDIV 386
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ ++N+ + + +F+++ GL P+ TY + QSGK + E F++M
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +TY +L+ + G++N+A+ M++ + +Y + +CN +
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
DA + + S + KP +T+ +I G + + +F+ MK D C P+ T N
Sbjct: 507 DDAWSLFCSL-SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 495 MLKVYSRNDMFSKAKELFEE 514
+++ + + EL EE
Sbjct: 566 LIRAHLGGSGLISSVELIEE 585
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/373 (18%), Positives = 155/373 (41%), Gaps = 30/373 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD + ++ G + E V L++RM + + PDLV + ++
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR---------------PDLVTVSTLI 182
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N + + ++ + G +P TYG + + +SG L + FRKM +
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+ Y +++ + ++G ++A++ ME +G+ Y L LCN+G+W D +
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
+ ++ R+ P +TF+ LI + G + + ++ M P+ T N+++ +
Sbjct: 303 LREMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ + +A ++F+ +PD TYS ++ + A + + ++
Sbjct: 362 KENCLHEANQMFDLMVSKGC-------------EPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
+ ++ G + + L++ ++GK + + F ++ G P + + +L
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 621 SNYEKAVALINAM 633
KA+ + M
Sbjct: 469 GELNKALEIFEKM 481
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 157/409 (38%), Gaps = 47/409 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL KG +A+ ++D + YG + Y +L L K+G AL +F
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQ-----PDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M E+ N+ + Y V +L + G + + L M K K D
Sbjct: 236 M-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK---------------AD 279
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+V Y++++ +W + +++ + P T+ ++V ++ GK E +
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M G A +TY L+ F +E ++EA M +G Y L C
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
R D M + +I S + P IT+ L++ G ++ +FQ M P++ T
Sbjct: 400 RVDDGMRLFREISS-KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 493 NAMLKVYSRNDMFSKAKELFEE----------------------TTRANSSGYTFLSGDG 530
+L N +KA E+FE+ ++ + + F S
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+KPD TY+ M+ + +++ M GC D + L+
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/343 (17%), Positives = 131/343 (38%), Gaps = 52/343 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+E D+ ++N + F V + K G +P T+ + G+
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV---------------------- 407
+M + + +T L+ +G+++EA+ +
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 408 -------------RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
R ME+R + + Y + LC +G + DA+ + +++ ++ K
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME-MKGIKAD 279
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
+T++ LI + G DD + + M + P++ T +A++ V+ + +AKEL+
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 514 E-TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
E TR + PD TY+S+++ + ++ M GC+ D
Sbjct: 340 EMITRG--------------IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
++ L+ +A + F + G IP+ + + +++
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 142/341 (41%), Gaps = 36/341 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P + +N + +A + Q+ V K + +G++ T + + + K
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN---MEQRGVVGTASVYYELACC 428
+ K G +T+ LV F EG+++EAVA V M+QR + T S L
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST---LING 184
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
LC GR +A+++++++ +P E+T+ ++ G+ + +F+ M++ + +
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSG---------DGAP-- 532
++ + ++ ++ F A LF E +A+ Y+ L G DGA
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 533 -------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+ PD T+S++++ + + +Y M G D + L+ +
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
H FD ++ G P +++ +I+ ++Y KA
Sbjct: 364 NCLHEANQMFDLMVSKGCEP------DIVTYSILINSYCKA 398
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 78/204 (38%), Gaps = 21/204 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ KA R + +R+F + L P+ Y+++ + Q G L +L + M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFR-EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 291 --RQKPSKRIK------------------NMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
R P + + K + + +YN +++ + +
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ +F L G+KP TY + + + + G FRKM + G TY +L
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Query: 391 VRAFWEEGKINEAVAAVRNMEQRG 414
+RA + +V + M+ G
Sbjct: 567 IRAHLGGSGLISSVELIEEMKVCG 590
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 147/353 (41%), Gaps = 37/353 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L K GR EA +IF+ M + L PDIA Y ++ G L E+ L++ M
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKR-GLEPDIATYCTLLQGYATKGALVEMHALLDLM 362
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + PD V+N ++ A + VF ++R+ GL P+
Sbjct: 363 VRNG---------------IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYG + ++ +SG D +F +M G + Y L+ + K ++A + M
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEITFTGLIISSMD 467
RG+ + + C GR ++ EK+ L KP IT++ LI
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIES----EKLFDLMVRIGVKPNVITYSTLIDGYCL 523
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +D+ + M +P+ T N ++ Y R A LF+E SSG
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMV---SSG---- 576
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ P+ TY+ +L+ + + +Y G+ SG QL+ + + +L
Sbjct: 577 ------VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 159/370 (42%), Gaps = 21/370 (5%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R EA L+ L + T+ V R M + M LLKGL D+
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + YT ++ K G +A ++ ML D + PD+
Sbjct: 175 QEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML-DRRISPDVVT 233
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ L + + + ++++ M +KN + P+ + YN++L+
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTM-------VKNG--------VMPNCMTYNSILHGYCS 278
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
S Q K K++R G++P TY M+ + ++G+ + F M K G T
Sbjct: 279 SEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIAT 338
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L++ + +G + E A + M + G+ V+ L C + +AMLV K++
Sbjct: 339 YCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398
Query: 447 SLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 504
+H P +T+ +I G +DD + F+ M D PNI +++ D
Sbjct: 399 --QHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456
Query: 505 FSKAKELFEE 514
+ KA+EL E
Sbjct: 457 WDKAEELILE 466
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K GR E+ ++F+LM+ + P++ Y ++ G + E KL+ M
Sbjct: 488 KEGRVIESEKLFDLMVR-IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM--------- 537
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ ++PD V YN ++N + +FK++ SG+ P+ TY + ++ +
Sbjct: 538 ------FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ + E + + KSG + TY +++ + +EA+ +N+
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 171/415 (41%), Gaps = 57/415 (13%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + K M + GL LL+G KG+ + ++LD +
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D V+ L+ K + EA+ +F+ M + L P++ Y +V L + G +
Sbjct: 367 IHPD---HHVFNILICAYAKQEKVDEAMLVFSKMRQH-GLNPNVVTYGAVIGILCKSGSV 422
Query: 281 KELVKLIERMRQK---PSKRIKN--MHR----KNWDP-------VLEPDLVVYNAVLNAC 324
+ + E+M + P+ + +H WD +L+ + + N+
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482
Query: 325 VPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+ SH +G +F + + G+KP+ TY ++ +GK D + M G
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM- 439
+TY L+ + ++++A+A + M GV Y + L + R A
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHI-DDCISIFQHMKDHCEPNIG-------- 490
L V KS LE++ +I+ + ++ D+ + +FQ++ C ++
Sbjct: 603 LYVGITKS---GTQLELSTYNIILHGLCKNNLTDEALRMFQNL---CLTDLQLETRTFNI 656
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+ A+LKV RND +AK+LF LS +G L PD TYS M E
Sbjct: 657 MIGALLKV-GRND---EAKDLFAA-----------LSANG--LVPDVRTYSLMAE 694
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/322 (19%), Positives = 127/322 (39%), Gaps = 20/322 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TYG+ + ++G+ DL + K G
Sbjct: 60 VARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFR 119
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+T+ L++ + + ++A+ V R M + + L LC+ R Q+A+
Sbjct: 120 VEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 179
Query: 441 VVEKIKSLR--HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK 497
++ + R S P +++T +I G D S + M D P++ T ++++
Sbjct: 180 LLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIA 239
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
+ KA E+ + + P+ TY+S+L ++ Q +
Sbjct: 240 ALCKGQAMDKAMEVLTTMVKNG-------------VMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
K M G + D + L+ + G+ FDS+ + G P + +L
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 618 IVQSNYEKAVALINAMAYAPFH 639
+ + AL++ M H
Sbjct: 347 ATKGALVEMHALLDLMVRNGIH 368
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 147/320 (45%), Gaps = 32/320 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLI 287
+ ++ +++ G++G +EA++IF M +D L P++ Y++V G+ G+ K ++++
Sbjct: 113 YAFSAIISAYGRSGYCNEAIKIFYSM-KDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIF 171
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ M + ++PD + +N++L C W+ + ++ G+
Sbjct: 172 DEMLRNG---------------MQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQ 216
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY ++ + + G+ D+ E +M +TY ++ + + G++++A
Sbjct: 217 DIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLF 276
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M+ G+ Y L GR+++AM V ++++ K + +T+ L+
Sbjct: 277 NEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDV-VTYNALLGGYGK 335
Query: 468 GGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
D +F+ MK H PN+ T + ++ VYS+ ++ +A ++F E +A
Sbjct: 336 QYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAG------- 388
Query: 527 SGDGAPLKPDEYTYSSMLEA 546
LK D YS++++A
Sbjct: 389 ------LKADVVLYSALIDA 402
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 17/234 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y LL + K G+ A I + M N+ P++ Y ++ + G L + L
Sbjct: 219 FTYNTLLDAVCKGGQLDMAFEIMSEMPAK-NILPNVVTYSTMIDGYAKAGRLDDARNLFN 277
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+ + D V YN +L+ +++ V +++ SG++
Sbjct: 278 EMKFLG---------------ISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKD 322
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + KYD+V + F +M + LTY L+ + + G EA+ R
Sbjct: 323 VVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFR 382
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
++ G+ +Y L LC NG + A+ +++++ +P +T+ +I
Sbjct: 383 EFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRPNVVTYNSII 435
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 114/295 (38%), Gaps = 40/295 (13%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y LL+I K GR EA+ + M E+ + D+ Y+++ G+ + K+
Sbjct: 288 RVSYNTLLSIYAKLGRFEEAMDVCREM-ENSGIRKDVVTYNALLGGYGKQYKYDVVRKVF 346
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M+ + + P+L+ Y+ +++ ++ VF++ +K+GLK
Sbjct: 347 EEMKARH---------------VSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKA 391
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
Y ++ + ++G + +M K G +TY ++ AF V
Sbjct: 392 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDA 451
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQD------AMLVVEKIKSLRHSKPLEITFTGL 461
+ + +S E A R + L EK ++S
Sbjct: 452 GQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNS---------- 501
Query: 462 IISSMDGGHIDDCI-SIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
GG CI +F M + +PN+ T +A+L SR + F +A L EE
Sbjct: 502 ------GGQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEE 550
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 21/197 (10%)
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM-FSKAKELFEET 515
F+ +I + G+ ++ I IF MKD+ +PN+ T NA++ + + F + E+F+E
Sbjct: 115 FSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEM 174
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
R ++PD T++S+L + WE + M G D +
Sbjct: 175 LRNG-------------MQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTY 221
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
LL + G+ L+ AF+ + E +P+ + ++ M+ + A L N
Sbjct: 222 NTLLDAVCKGGQ---LDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNE 278
Query: 633 MAYAPFHITERQWTELF 649
M + + + L
Sbjct: 279 MKFLGISLDRVSYNTLL 295
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 91/236 (38%), Gaps = 19/236 (8%)
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
GK ++ F+ G + ++ A+ G NEA+ +M+ G+ V
Sbjct: 91 GKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNL-VT 149
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y C G + ++ + LR+ +P ITF L+ GG + S+ M
Sbjct: 150 YNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEM 209
Query: 482 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
+ + +I T N +L + A E+ E N + P+ TY
Sbjct: 210 VNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKN-------------ILPNVVTY 256
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
S+M++ A A + + ++ M G LD+ + LL ++ G+ E A D
Sbjct: 257 STMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGR---FEEAMD 309
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 179/399 (44%), Gaps = 46/399 (11%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D++SR TKL+ L + GRP EA IFN ++E+ + P + Y ++ L + L
Sbjct: 318 DVRSR---TKLMNGLIERGRPQEAHSIFNTLIEEGH-KPSLITYTTLVTALTRQKHFHSL 373
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ LI ++ + L+PD +++NA++NA S +F+++++S
Sbjct: 374 LSLISKVEKNG---------------LKPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI--GALTYKVLVRAFWEEGKIN 401
G KP+A+T+ ++ + GK + M + E + T +LV+A+ + KI
Sbjct: 419 GCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRD-EMLQPNDRTCNILVQAWCNQRKIE 477
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFT 459
EA V M+ GV + LA G A ++ I + H+K P T
Sbjct: 478 EAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTCG 535
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY-SRNDM--FSKAKELFEET 515
++ + G +++ + F MK+ PN+ N+++K + + NDM + +L EE
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 595
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+KPD T+S+++ A ++ + E +Y M G D
Sbjct: 596 G----------------VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 639
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ L +RAG+ + + + + G P+ + +T+++
Sbjct: 640 SILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQII 678
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 124/323 (38%), Gaps = 24/323 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ SE + K M +SG T L+KG G G ++ +LD + L+
Sbjct: 395 IINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM--LR 452
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-L 279
D+ + L+ + EA I M + + PD+ ++++A ++G
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM-QSYGVKPDVVTFNTLAKAYARIGST 511
Query: 280 LKELVKLIERM---RQKPSKRIKNMHRKNW-----------------DPVLEPDLVVYNA 319
+I RM + KP+ R + + + P+L V+N+
Sbjct: 512 CTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNS 571
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ + + GV V + + G+KP T+ M G E + M + G
Sbjct: 572 LIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGG 631
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ +L + + G+ +A + M + GV +Y ++ C+ G + AM
Sbjct: 632 IDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAM 691
Query: 440 LVVEKIKSLRHSKPLEITFTGLI 462
V +K+ + P T+ LI
Sbjct: 692 QVYKKMCGIVGLSPNLTTYETLI 714
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 88/198 (44%), Gaps = 22/198 (11%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPS--- 295
G+ EALR F M E ++P++ ++S+ + + + + E+V L+E KP
Sbjct: 545 GKMEEALRFFYRMKE-LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVT 603
Query: 296 --------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
KR + ++ + ++PD+ ++ + + + + + Q+R
Sbjct: 604 FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMR 663
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK-SGEAIGALTYKVLVRAFWEEGKI 400
K G++P+ Y + +G+ + ++KM G + TY+ L+ F E +
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQP 723
Query: 401 NEAVAAVRNMEQRGVVGT 418
+A +++ME + VV T
Sbjct: 724 WKAEELLKDMEGKNVVPT 741
>gi|255660990|gb|ACU25664.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 376
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KSG ++TY +LV F + G I++++ + +Q+G V A Y + L
Sbjct: 80 SIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDRAVSVLNGMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LNPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/341 (18%), Positives = 139/341 (40%), Gaps = 32/341 (9%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G A R++ ++E + PD Y+++ +V +K+ +L E M + ++ +
Sbjct: 2 ESGDIDGAERVYKEIVES-KVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ +N ++ + + V +++ ++KSG + TYG+ +
Sbjct: 61 S----------------FNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGF 104
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++G D + G + A Y ++ +E ++ AV+ + M + G A
Sbjct: 105 CKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNA 164
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
VY L L +++DA+ V ++ ++ H P IT+ LI + ++ +
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTM-HCSPTIITYNTLINGLCKNEMFGEAYNLVK 223
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
+ D P + T + ++K + KA +L+ + T S G+ KPD
Sbjct: 224 ELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVT---SKGF----------KPDVQ 270
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++ ++ + + + +Y M C + H L+
Sbjct: 271 MHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLM 311
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 112/281 (39%), Gaps = 19/281 (6%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LV + K+ + + Q G + ++ GL + + +A+SVL+ G+
Sbjct: 99 ILVHGFCKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLN---GM 155
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ VY L+ L A + +A+R+F M + P I Y+++ L + +
Sbjct: 156 IKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREM-GTMHCSPTIITYNTLINGLCKNEM 214
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E L++ + K L P ++ Y+ ++ H+ + ++ Q
Sbjct: 215 FGEAYNLVKELLDKG---------------LNPGVITYSMLMKGLCLDHKVEKALQLWNQ 259
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ G KP + + + + GK L + M + A +++ L+ F+++G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
I A+ + + G+ Y LC+ R DA+L
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
>gi|255660996|gb|ACU25667.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 376
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDSVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KSG ++T+ +LV F + G IN+++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDKAVSVLNGMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LNPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ G+ L L FD
Sbjct: 245 CLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQLALSLYFD 294
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 126/303 (41%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K ++ + L+ K G +++L + M
Sbjct: 65 MMRGLFDNGKVDEVISIWEL---MKKSGFVEDSITFGILVHGFCKNGYINKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L + V ++ M + K P+
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCK---------------PNAH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N V + +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + K+ A+ + +G ++ L LC+ G
Sbjct: 226 LDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEM 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
Q A+ + + + P ++ L+ G I + + I+ +++ EP+I + N
Sbjct: 286 QLALSLYFDMNRWK-CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNI 344
Query: 495 MLK 497
LK
Sbjct: 345 TLK 347
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 111/513 (21%), Positives = 203/513 (39%), Gaps = 86/513 (16%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M Q G + LLKGL D+
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A+ +L + D D V YT ++ K G +A ++ ML D + P++
Sbjct: 179 QEALELLQMMP--DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML-DRGILPNVV 235
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQ---------------------KPSKRIKNMHRK 304
Y+S+ L + + + ++++ M + +P + I + +
Sbjct: 236 TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
+ D V EPD+V YN++++ + + +F + K GLKP TYG ++ G
Sbjct: 296 HSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
+H M ++G + +L+ A+ ++GK+++A+ M Q+G+ Y
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI----------------ISSMDG 468
+ LC +GR +DAM E++ R S P I + LI + +D
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLIHSLCIFDKWDKAKELILEMLDR 473
Query: 469 GHIDDCISIFQHMKDHCE--------------------PNIGTVNAMLKVYSRNDMFSKA 508
G D I + HC+ PNI T + ++ Y +A
Sbjct: 474 GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEA 533
Query: 509 KELFEE-----------TTRANSSGYT-----------FLSGDGAPLKPDEYTYSSMLEA 546
+L T +GY F + + + PD TY+ +L+
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ + +Y G+ SG QL+ + + +L
Sbjct: 594 LFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/441 (19%), Positives = 158/441 (35%), Gaps = 65/441 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T LL L R +A+ I + P++ +Y+ LLK L E
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNI---------LLKGLCD--ENR 177
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ + ++ M D PD+V Y V+N + + ++ G+ P+
Sbjct: 178 SQEALELLQMMPDDGGD--CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVV 235
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + ++ D E M K+G TY +V + G+ EA+ ++ M
Sbjct: 236 TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT------------- 457
GV Y L LC NGR +A + + + R KP EIT
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK-RGLKP-EITTYGTLLQGYATKG 353
Query: 458 -----------------------FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
F+ LI + G +D + +F M+ P+ T
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
++ + ++ A FE+ L P Y+S++ + +W
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDER-------------LSPGNIVYNSLIHSLCIFDKW 460
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
+ + + M G LD ++ + G+ E FD ++ G P+ + ++ +
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTL 520
Query: 614 LIQAIVQSNYEKAVALINAMA 634
+ + ++A L+ +M
Sbjct: 521 IDGYCLAGKMDEATKLLASMV 541
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 169/434 (38%), Gaps = 95/434 (21%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K G+ +A+ +F+ M + L PD Y +V L + G
Sbjct: 370 IH-----PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIGILCKSG 423
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL----------------- 321
+++ ++ E+M D L P +VYN+++
Sbjct: 424 RVEDAMRYFEQM---------------IDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 322 --------------NACVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQSG 363
N+ + SH +G +F + + G+KP+ TY ++ +G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAG 528
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
K D + M G +TY L+ + + ++ +A+ R ME GV Y
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 424 ELACCLCNNGRWQDAMLVVEK---IKSLRHSKPLEITFTGLIISSMDGGHI-DDCISIFQ 479
+ G +Q K + LE++ +I+ + ++ D+ + +FQ
Sbjct: 589 IIL-----QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQ 643
Query: 480 HMKDHCEPNIG--------TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
++ C ++ + A+LKV RND +AK+LF LS +G
Sbjct: 644 NL---CLTDLQLETRTFNIMIGALLKV-GRND---EAKDLFAA-----------LSANG- 684
Query: 532 PLKPDEYTYSSMLE 545
L PD TYS M E
Sbjct: 685 -LVPDVRTYSLMAE 697
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 120/296 (40%), Gaps = 19/296 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TYG+ + +G+ DL + K G
Sbjct: 64 VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+ + L++ + + ++A+ V R M Q G + Y L LC+ R Q+A+
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183
Query: 441 VVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
+++ + P + +++T +I G +D + M D PN+ T N+++
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAA 243
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ KA E+ + + P+ TY+S++ ++ Q +
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNG-------------VMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
K M G + D + L+ + G+C FDS+ + G P + +L
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 188/483 (38%), Gaps = 53/483 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
V++ L + + F M GL FT G L+ GL ++A ++LD +
Sbjct: 283 VMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA---LMNGLCKGSRLKEAKALLDEM 339
Query: 217 Y--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
GLK + VY L+ K G+ EA I M+ + P+ Y ++ L
Sbjct: 340 SCSGLK-----PNIVVYGTLVDGFMKEGKTAEAFDILKEMIS-AGVQPNKIMYDNLIRGL 393
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
++G L KL++ M + L PD YN ++ H G F
Sbjct: 394 CKIGQLGRASKLLKEMIKVG---------------LRPDTFTYNPLMQGHFQQHDKDGAF 438
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+ ++R SG+ P+ +YG+ + + Q+G+ +M G A Y L+
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 498
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+EG I+ A A+ M + V Y L L GR ++A +++ R P
Sbjct: 499 SKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQK-RGLVPD 557
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
E T++GLI G+++ + + M + +PN T +L+ Y +++ + K + +
Sbjct: 558 EFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQ 617
Query: 514 ETTRANSSGYTFLSG----------------------DGAPLKPDEYTYSSMLEASATAH 551
+ + G + L PD + YSS++
Sbjct: 618 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIA 677
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
E + MA G + + L+ R+G + FDS+L G +P+ + +T
Sbjct: 678 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYT 737
Query: 612 EML 614
++
Sbjct: 738 ALI 740
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD Y A++N + K + ++ SGLKP+ YG ++ ++ GK
Sbjct: 309 LSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAF 368
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ ++M +G + Y L+R + G++ A ++ M + G+ Y L
Sbjct: 369 DILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLM--- 425
Query: 430 CNNGRWQ--DAMLVVEKIKSLRHSKPLEITFT-GLIISSM-DGGHIDDCISIFQHM-KDH 484
G +Q D E + +R+S L ++ G++I+ + G + ++ + M +
Sbjct: 426 --QGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG 483
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+PN ++ +S+ S A E E+ T+AN + PD + Y+S++
Sbjct: 484 LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN-------------VHPDLFCYNSLI 530
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ +T + E E Y + G D+ ++ L+ + G + +L +G
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLK 590
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAM 633
P+ +T++L ++YEK +++ +M
Sbjct: 591 PNADTYTDLLEGYFKSNDYEKVSSILQSM 619
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 20/262 (7%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+ +R M SGL LL+G + + S+L + G DK D +Y ++
Sbjct: 579 QLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPD---NHIYGIVI 635
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
L ++ A + +E L PD+ Y S+ L ++ +++ V L++ M ++
Sbjct: 636 RNLSRSENMEVAFMVLT-EVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG- 693
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
LEP +V YNA+++ S VF + GL P+ TY
Sbjct: 694 --------------LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTAL 739
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ ++G + +++M G A A Y VL + + +A+ M RG
Sbjct: 740 IDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY 799
Query: 416 VGTASVYYELACCLCNNGRWQD 437
S++ L C G+ Q+
Sbjct: 800 A-NVSLFNTLVHGFCKRGKLQE 820
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/309 (18%), Positives = 120/309 (38%), Gaps = 16/309 (5%)
Query: 333 VFWVFKQ-LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+ W K + +G+ P TY +E ++ +D + F +M + A+ +TY V++
Sbjct: 226 LLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMI 285
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
G + EA M G+ A Y L LC R ++A +++++ S
Sbjct: 286 SGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM-SCSGL 344
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
KP + + L+ M G + I + M +PN + +++ + +A +
Sbjct: 345 KPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASK 404
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
L +E + L+PD +TY+ +++ H + + M SG
Sbjct: 405 LLKEMIKVG-------------LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILP 451
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
+ + ++ + G+ + + ++ G P+ + ++I + N A +
Sbjct: 452 NVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEAL 511
Query: 631 NAMAYAPFH 639
M A H
Sbjct: 512 EKMTKANVH 520
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 133/348 (38%), Gaps = 29/348 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL-KSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+KGL G +A + Y KR L F Y+ L+ K G +A ++ M
Sbjct: 529 LIKGLSTVGRMEEA----EEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQM 584
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKRI-----KNMHRKNW 306
L + L P+ Y + + +++ +++ M KP I +N+ R
Sbjct: 585 L-NSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 643
Query: 307 DPV------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
V L PDL +Y+++++ + + ++ K GL+P Y
Sbjct: 644 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNA 703
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ +SG F + G +TY L+ + G I +A + M RG
Sbjct: 704 LIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRG 763
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ A VY LA + + A+ + E++ + ++ F L+ G + +
Sbjct: 764 IAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAN--VSLFNTLVHGFCKRGKLQET 821
Query: 475 ISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
+ M D PN TV ++ + + +A +F E + +S
Sbjct: 822 EKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKAS 869
>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 376
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 122/280 (43%), Gaps = 18/280 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYN +LN + K F +++ + G + S +++ + M + GK D V
Sbjct: 21 VSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEGNR-SVSSFNIMMRGLFDXGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KS ++TY +LV F + G IN+++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVV-EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ + IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDKAVSVLNDMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A +L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYDLVKEMLEKG-------------LNPSVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
H+ E ++ + G + D H L+ GK
Sbjct: 245 CLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGK 284
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 134/324 (41%), Gaps = 23/324 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+++GL D G + +S+ + L K D ++ Y L+ K G +++L + M
Sbjct: 65 MMRGLFDXGKVDEVISI----WELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLE-M 119
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E D AY ++ L + L + V ++ M + K P+
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCK---------------PNA 164
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
VYN ++N V + +++ VF+++ P+ TY + + ++ + ++ ++
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKE 224
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G +TY +L++ + K+ A+ + +G ++ L LC+ G+
Sbjct: 225 MLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGK 284
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVN 493
Q A+ + + + P +T L+ G I + + I+ +++ EP+I + N
Sbjct: 285 TQRALSLYFXMNRWK-CAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYN 343
Query: 494 AMLKVYSRNDMFSKAKELFEETTR 517
LK + A ++ R
Sbjct: 344 ITLKGLCSCNRICDAILFLHDSVR 367
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 157/370 (42%), Gaps = 32/370 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD ++++ L + E ++L++RM + K P L+ N ++
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK---------------PTLITLNTLV 200
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N + + + ++ ++G +P+ TYG + VM +SG+ L E RKM +
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD-AML 440
+ A+ Y +++ ++G ++ A ME +G Y L CN GRW D A L
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
+ + IK R P +TF+ LI S + G + + + + M PN T N+++ +
Sbjct: 321 LRDMIK--RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
+ + +A ++ + + G PD T++ ++ A++ + +
Sbjct: 379 CKENRLEEAIQMVD-----------LMISKGC--DPDIMTFNILINGYCKANRIDDGLEL 425
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
++ M+L G + + L+ ++GK + + F ++ P + + +L
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 620 QSNYEKAVAL 629
EKA+ +
Sbjct: 486 NGELEKALEI 495
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 155/378 (41%), Gaps = 36/378 (9%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
TA + +R M + + + ++ GL GS A ++ + + K D+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI---IT 300
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ AGR + ++ M++ + P++ + + + + G L+E +L++ M
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ + P+ + YN++++ ++ + + + G P
Sbjct: 360 MQRG---------------IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + + ++ + D E FR+M+ G +TY LV+ F + GK+ A + M
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGG 469
R V Y L LC+NG + A+ + KI+ + L+I +II M +
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE--KSKMELDIGIYMIIIHGMCNAS 522
Query: 470 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+DD +F + + + N M+ R D SKA LF + T +
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA------- 575
Query: 529 DGAPLKPDEYTYSSMLEA 546
PDE TY+ ++ A
Sbjct: 576 ------PDELTYNILIRA 587
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/323 (16%), Positives = 132/323 (40%), Gaps = 15/323 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P ++ +N + +A + Q++ V + KQ+ G+ S T + + + K
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G + + L+ E +++EA+ V M + G T L LC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 490
NG+ DA+++++++ +P E+T+ ++ G + + + M++ + + +
Sbjct: 206 NGKVSDAVVLIDRMVETGF-QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ ++ ++ A LF E G+ K D TY++++ A
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEM---EIKGF----------KADIITYNTLIGGFCNA 311
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+W+ + + M + + L+ + GK + +++ G P+ + +
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 611 TEMLIQAIVQSNYEKAVALINAM 633
++ ++ E+A+ +++ M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLM 394
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 76/184 (41%), Gaps = 16/184 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ ++G+ A ++F M+ + PDI +Y + L G L++ +++ ++
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ +E D+ +Y +++ + + + +F L G+K A
Sbjct: 500 EKSK---------------MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + + + + FRKM + G A LTY +L+RA + A + M
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Query: 411 EQRG 414
+ G
Sbjct: 605 KSSG 608
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 178/428 (41%), Gaps = 54/428 (12%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+ +R +A L+ L + + + +M +G + L+ GL G
Sbjct: 4 RHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDA 63
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A ++L + D + YT L+ L KA RPH+A++ ML PD+ Y+
Sbjct: 64 AQALLQK---MADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRS-GCEPDLVTYN 119
Query: 269 SV------AVTLGQVGL-LKELVKLIERMR--------------------QKPSKRIKNM 301
S+ A + GL L+EL +IE R K + ++ M
Sbjct: 120 SLIHGLCMANRMDDAGLVLQEL--MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 177
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
R + PD+V + ++++ +++ F VFK + + G P + TY + ++ + +
Sbjct: 178 DRGG----ISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSR 233
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+ + D V E M KSG + TY L+ A G I A A + G V
Sbjct: 234 ANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYT 293
Query: 422 YYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
+ LC +G++ A +++ I+S S P +++ +I G++DD + +
Sbjct: 294 HNAFIGALCRSGKFPLAKNILLGMIES--GSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 351
Query: 481 MKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M D C+P++ N ++ + + S+A++L +E N PD
Sbjct: 352 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNIC------------VPDVV 399
Query: 539 TYSSMLEA 546
TY++M++
Sbjct: 400 TYNTMIDG 407
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 50/346 (14%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D +YN ++ + + + + + +G S TY ++ + +SG D
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+KMA +G A +TY L+ + + ++A+ V+ M + G Y L LC
Sbjct: 69 QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128
Query: 433 GRWQDAMLVVEKI---------------------KSLRHSKPLE--------------IT 457
R DA LV++++ K+ + K LE +T
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
F +I IDD +F+ M + C P+ T + ML SR + +E+ E
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
+ SG+ LS TY+ ++ A A E + Y+ +GC ++ H
Sbjct: 249 K---SGHYALSA----------TYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHN 295
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ R+GK L ++ ++E+G +P+ L + +I + +S
Sbjct: 296 AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSY-NFVIDGLCKSG 340
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 144/311 (46%), Gaps = 20/311 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD +YN++++A + QW+ + + ++ + PS TY + +G + E
Sbjct: 187 KPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALE 246
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+KM ++G +T+ +++ AF + ++A+A M+ + + CL
Sbjct: 247 LCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLV 306
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
+G++ +A+ ++ ++ R P + +T+T ++ S G ++DC ++F M + +PN
Sbjct: 307 KDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPN 366
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I + NA+L Y+ M + A +F+ L +G L+PD +Y+++L A
Sbjct: 367 IVSYNALLGAYASRGMHADALGIFK-----------LLKQNG--LRPDVVSYTTLLNAYG 413
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL--LEAGEIPH 606
+ Q E +K M + C+ + + L+ AG + + A L +E IP
Sbjct: 414 RSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAG---MFKEAISLLHEMEKDGIPP 470
Query: 607 PLFFTEMLIQA 617
+ L+ A
Sbjct: 471 DVVSISTLLTA 481
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/421 (19%), Positives = 180/421 (42%), Gaps = 59/421 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L++ + GS + A+ V W +K++ + +R +Y ++ + + + +A +F
Sbjct: 125 LIREITFAGSLQHAVHVFRW---MKNQENYCARNDIYGMMIRLHARHSQIDQARGLF-FE 180
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ PD Y+S+ + G + + +++ M + + P
Sbjct: 181 MQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLR---------------AAIPPSR 225
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN V+NAC + WK + K++ ++G+ P T+ + + +Y +F
Sbjct: 226 TTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEM 285
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR------GVVGTASVYYELACC 428
M + A T +++ ++G+ EA+ + +M ++ VV S+ + C
Sbjct: 286 MKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVC 345
Query: 429 LCNNGRWQDA-----MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
G+ +D M+V E + KP +++ L+ + G D + IF+ +K
Sbjct: 346 ----GKVEDCKAVFDMMVAEGV------KPNIVSYNALLGAYASRGMHADALGIFKLLKQ 395
Query: 484 H-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
+ P++ + +L Y R+ KA+E F+E R NS +P+ +Y++
Sbjct: 396 NGLRPDVVSYTTLLNAYGRSGQPEKAREAFKE-MRKNSC------------RPNIVSYNA 442
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
+++A +A ++ + M G D + LL + G+C + D++LEA
Sbjct: 443 LIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLL---TACGRCRQITK-IDTILEAA 498
Query: 603 E 603
+
Sbjct: 499 K 499
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 168/445 (37%), Gaps = 77/445 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y L+ +AG+ A+ I + ML + P Y++V G G K+ ++L ++
Sbjct: 192 IYNSLIHAHARAGQWRWAINIMDDMLRAA-IPPSRTTYNNVINACGAAGNWKKALELCKK 250
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + + PDLV +N VL+A Q+ F+ ++ + + P
Sbjct: 251 MTRNG---------------VGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDT 295
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKM--AKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
T + + +++ G+Y E M ++ +TY ++ +++ GK+ + A
Sbjct: 296 FTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVF 355
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M GV Y L + G DA+ + + +K +P +++T L+ +
Sbjct: 356 DMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQ-NGLRPDVVSYTTLLNAYGR 414
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR--------- 517
G + F+ M K+ C PNI + NA++ Y MF +A L E +
Sbjct: 415 SGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVS 474
Query: 518 -----------------------ANSSG-----YTFLSGDGAPLK--------------- 534
A S G + SG G+ L
Sbjct: 475 ISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMM 534
Query: 535 -----PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
PD TY+ ++ ++ ++ M L + ++ L+ + GK
Sbjct: 535 ASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLT 594
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEML 614
E F S+ E+G +P L +T M+
Sbjct: 595 EAESTFSSMKESGCLPDVLTYTAMI 619
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 182/453 (40%), Gaps = 62/453 (13%)
Query: 172 AKNWK----FVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD 224
A NWK + M ++G+ + T +L K + + +A++ + + G D
Sbjct: 238 AGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFK---NGSQYSKAIAYFEMMKGANIAPD 294
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKEL 283
F ++ L K G+ EA+ + N M E PD+ Y S+ + G +++
Sbjct: 295 ---TFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDC 351
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ + M + K P++V YNA+L A +FK L+++
Sbjct: 352 KAVFDMMVAEGVK---------------PNIVSYNALLGAYASRGMHADALGIFKLLKQN 396
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
GL+P +Y + +SG+ + E F++M K+ ++Y L+ A+ G EA
Sbjct: 397 GLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEA 456
Query: 404 VAAVRNMEQRG----VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
++ + ME+ G VV +++ AC C D +L K + ++ + + +
Sbjct: 457 ISLLHEMEKDGIPPDVVSISTLL--TACGRCRQITKIDTILEAAKSRGIKLNI---VCYN 511
Query: 460 GLIISSMDGGHIDDCISIFQ-HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT-- 516
I S ++ G + ++ M + P+ T N ++ + ++++ + FE+
Sbjct: 512 SGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDL 571
Query: 517 --------------------RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
+ + TF S + PD TY++M+EA W
Sbjct: 572 RIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNA 631
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
++K M + Q D + L+ EA G H
Sbjct: 632 WDLFKEMEGNTVQPDAIICSSLM-EALNRGSQH 663
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 110/274 (40%), Gaps = 24/274 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G + +++ + + D R ++ VY+ L+ K G+ EA F+ M
Sbjct: 548 LISGLCKVGKYAESLKFFE---DMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMK 604
Query: 256 EDCNLYPDIAAYHSVAVTLGQVG-------LLKEL------------VKLIERM-RQKPS 295
E L PD+ Y ++ G L KE+ L+E + R
Sbjct: 605 ESGCL-PDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQH 663
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+R+ + + + + Y ++ +C WK + + L S S T
Sbjct: 664 ERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHL 723
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + + GK + + + F KM S +G TY VL+R GK + + ++ ME GV
Sbjct: 724 LTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGV 783
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
T +Y + + + L+ EKI SLR
Sbjct: 784 SPTLYMYQNVLPYIWRDNSMDYVTLMQEKINSLR 817
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 33/342 (9%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
R ++ + L + G AL++ LML E C PD+ Y +V L G L+E +
Sbjct: 301 RVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE--PDVYTYSTVINCLCNNGELEEAKGI 358
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +M D PD +N ++ A +Q + + ++L GL
Sbjct: 359 VNQM---------------VDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLS 403
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ T+ + + + + G L F +M SG +TY +L+ GK+ +A+
Sbjct: 404 PNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDL 463
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
++ ME G + Y + LC R ++A V +++ + ITF LI
Sbjct: 464 LKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRN-AITFNTLIDGLC 522
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
+ IDD + M + +PN T N++L Y + SKA ++ + T ++G+
Sbjct: 523 NAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMT---ANGF-- 577
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+ D TY++++ A + + + +GM + G
Sbjct: 578 --------EVDVVTYATLINGLCKARRTQAALKLLRGMRMKG 611
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 121/292 (41%), Gaps = 18/292 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+EPD+V +N V++A + Q + + +++ + P T+ ME ++ G +
Sbjct: 192 IEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAAL 251
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M++ G + ++T VL+ + + G++ +A+ ++ G + L
Sbjct: 252 RLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGL 311
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C NG A+ V+ + +P T++ +I + G +++ I M D C P+
Sbjct: 312 CQNGHVDHALKVLGLMLQ-EGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPD 370
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T N ++ + +A +L E T L P+ YT++ ++ A
Sbjct: 371 TTTFNTLIVALCTENQLEEALDLARELTVKG-------------LSPNVYTFNILINALC 417
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+++ M SGC D+ + L+ +GK L A D L E
Sbjct: 418 KVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK---LAKALDLLKE 466
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 108/277 (38%), Gaps = 24/277 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW--VY 217
+L+D L AK ++ M SG + ++ GL + +A V D V
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT 505
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
G+ ++ + L+ L A R +A + + M+ + L P+ Y+S+ +
Sbjct: 506 GIG-----RNAITFNTLIDGLCNAERIDDAAELVDQMISE-GLQPNNVTYNSILTHYCKQ 559
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + + +++ M E D+V Y ++N + + + +
Sbjct: 560 GNISKAADILQTMTANG---------------FEVDVVTYATLINGLCKARRTQAALKLL 604
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE- 396
+ +R G+KP+ Y ++ + + FR+M + G A TYK++ R
Sbjct: 605 RGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRG 664
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
G I EA + M G + S + LA L N G
Sbjct: 665 GGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG 701
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 105/281 (37%), Gaps = 31/281 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH A+R+F M + PD Y+ + L G L + + L++
Sbjct: 407 YTFNILINALCKVGDPHLAVRLFEEM-KSSGCTPDEVTYNILIDNLCSSGKLAKALDLLK 465
Query: 289 RMRQKPSKRIKNMHRKNWDPV--------------------LEPDLVVYNAVLNACVPSH 328
M + + D + + + + +N +++ +
Sbjct: 466 EMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAE 525
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ + Q+ GL+P+ TY + + G + + M +G + +TY
Sbjct: 526 RIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYA 585
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL--CNNGRWQDAMLVVEKIK 446
L+ + + A+ +R M +G+ T Y + L NNGR DA+ + ++
Sbjct: 586 TLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGR--DALSLFREMT 643
Query: 447 SLRHSK---PLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
+ +I F GL GG I + M D+
Sbjct: 644 EVGGPPDAFTYKIVFRGL---CRGGGPIKEAFDFLVEMADN 681
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 155/348 (44%), Gaps = 41/348 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F YT+L+ LGKAGR EA F+ M E C PD +++ LG+ G L + +KL
Sbjct: 297 FTYTELIRGLGKAGRLDEAYNFFHEMRREGCR--PDTVLMNNMINFLGKAGRLDDAIKLF 354
Query: 288 ERM---RQKPSKRIKNMHRK-------------NW-----DPVLEPDLVVYNAVLNACVP 326
E M R PS N K +W + P Y+ +++
Sbjct: 355 EEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCK 414
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+++ + + +++ + G P A Y ++ + ++ +YDL +E F+++ ++ + A
Sbjct: 415 TNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARV 474
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y V+++ + G++++AV M + G Y L L G +A+ + +++
Sbjct: 475 YAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQ 534
Query: 447 SLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDM 504
H +I +I++++ G D + + +MK +P+ + N +L S M
Sbjct: 535 D--HGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGM 592
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
F +A +L +E N+ G+ + D TYSS+LEA Q
Sbjct: 593 FEEAAKLMKEM---NAIGFDY----------DLITYSSILEAIGKVDQ 627
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 134/317 (42%), Gaps = 40/317 (12%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D + Y ++ L V E+ K+I+ M + P + M + +L ++ AV
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVA- 176
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+F Q++ +P+A Y + +++ G+Y+ VHE + +M+ G+
Sbjct: 177 -------------IFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCF 223
Query: 383 -GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+TY L+ AF + G+ + A+ + M+ G+ TA +Y L L A+ +
Sbjct: 224 PDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGL 283
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
E+++ ++ +P T+T LI G +D+ + F M ++ C P+ +N M+
Sbjct: 284 FEEMRH-QYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLG 342
Query: 501 RNDMFSKAKELFE--ETTRANSSGYT---------------------FLSGDGAPLKPDE 537
+ A +LFE ET R S T F G+ + P
Sbjct: 343 KAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSP 402
Query: 538 YTYSSMLEASATAHQWE 554
+TYS +++ ++ E
Sbjct: 403 FTYSILIDGFCKTNRTE 419
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/466 (18%), Positives = 186/466 (39%), Gaps = 41/466 (8%)
Query: 145 WHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL-MFTEGQMLKLLKGLGD 202
W KR + + L+ L E + WK ++ M ++ + + T ++ +++ LG+
Sbjct: 108 WAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGN 167
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
+A+++ Y +K ++ + Y ++ +L G + ++N M + +P
Sbjct: 168 AKMISKAVAIF---YQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFP 224
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMR---QKPSKRIKNMHRK---NWDPV------- 309
D Y ++ ++G + L+ M+ +P+ +I M D V
Sbjct: 225 DTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLF 284
Query: 310 -------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
PD+ Y ++ + + + F ++R+ G +P + + ++
Sbjct: 285 EEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKA 344
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVAAVRNMEQRGVVGTASV 421
G+ D + F +M +TY +++A +E + +++E + M+ G+ +
Sbjct: 345 GRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFT 404
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y L C R + AM+++E++ + P + LI + D +FQ +
Sbjct: 405 YSILIDGFCKTNRTEKAMMLLEEMDE-KGFPPCPAAYCSLIDALGKAKRYDLANELFQEL 463
Query: 482 KDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
K++C + V A M+K + A +LF+E R + P+ Y Y
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCT-------------PNVYAY 510
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
++++ A A + + M GC D + +L ++ G
Sbjct: 511 NALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTG 556
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 31/319 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y ++A GR AL I M E + P+ Y +V +VG + E VK+ +
Sbjct: 74 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 133
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K ++P+ V+YNA++ + ++ + G+ +
Sbjct: 134 MLTKGE--------------VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 179
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
ATY L + + G+ +E +M G A TY +L+ +EG + +A+ N
Sbjct: 180 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 239
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +RGV T Y L L G+ Q+ L E ++ R +P + + LI S
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR--RGIRPDLVLYNALINSHSTS 297
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G+ID I M K P+ T N +++ +A++L +E T+
Sbjct: 298 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG-------- 349
Query: 528 GDGAPLKPDEYTYSSMLEA 546
++PD TY++++
Sbjct: 350 -----IQPDLVTYNTLISG 363
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 158/381 (41%), Gaps = 49/381 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLM 254
++ G +G + A LD + ++++ + +++ Y +++ K GR EA+++F+ M
Sbjct: 78 VIAGFCSRGRVQAA---LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 134
Query: 255 LEDCNLYPDIAAYHS-------------------------VAVTLGQVGLLKELVKLIER 289
L + P+ Y++ VA+T+ LL + + R
Sbjct: 135 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 194
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + ++ M K L PD+ YN ++N K +F+ + + G++ +
Sbjct: 195 -GTEAYELVEEMGGKG----LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 249
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + G+ + F + + G + Y L+ + G I+ A +
Sbjct: 250 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 309
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME++ + Y L LC GR +A +++++ R +P +T+ LI G
Sbjct: 310 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTK-RGIQPDLVTYNTLISGYSMKG 368
Query: 470 HIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ D + I M + P + T NA+++ +N A+ + +E +G T
Sbjct: 369 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV---ENGIT---- 421
Query: 529 DGAPLKPDEYTYSSMLEASAT 549
PD+ TY S++E T
Sbjct: 422 ------PDDSTYISLIEGLTT 436
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 122/304 (40%), Gaps = 23/304 (7%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F +F + + L T+ + + + +GK E R+M + A+TY ++
Sbjct: 26 FALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAG 81
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL---CNNGRWQDAMLVVEKIKSLRH 450
F G++ A+ +R M +RG G A Y + C GR +A+ V +++ +
Sbjct: 82 FCSRGRVQAALDIMREMRERG--GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 139
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
KP + + LI D G +D + M + + T N ++ + ++A
Sbjct: 140 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 199
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
EL EE + G G L PD +TY+ ++ + +++ M+ G +
Sbjct: 200 ELVEE-----------MGGKG--LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 246
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
+ L+ S+ G+ + FD + G P + + ++ N ++A +
Sbjct: 247 ATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 306
Query: 630 INAM 633
+ M
Sbjct: 307 MGEM 310
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 19/247 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ K G +AL IF M + + Y S+ L + G ++E KL +
Sbjct: 215 FTYNILINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTSLIYALSKKGQVQETDKLFD 273
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ + PDLV+YNA++N+ S F + ++ K + P
Sbjct: 274 EAVRRG---------------IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 318
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY M + G+ D + +M K G +TY L+ + +G + +A+
Sbjct: 319 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 378
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI--ISSM 466
M +G T Y L LC NG+ DA +V+++ P + T+ LI +++
Sbjct: 379 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE-NGITPDDSTYISLIEGLTTE 437
Query: 467 DGGHIDD 473
D IDD
Sbjct: 438 DERAIDD 444
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 130/319 (40%), Gaps = 31/319 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y ++A GR AL I M E + P+ Y +V +VG + E VK+ +
Sbjct: 521 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 580
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K ++P+ V+YNA++ + ++ + G+ +
Sbjct: 581 MLTKGE--------------VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 626
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
ATY L + + G+ +E +M G A TY +L+ +EG + +A+ N
Sbjct: 627 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 686
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +RGV T Y L L G+ Q+ L E ++ R +P + + LI S
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR--RGIRPDLVLYNALINSHSTS 744
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G+ID I M K P+ T N +++ +A++L +E T
Sbjct: 745 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG-------- 796
Query: 528 GDGAPLKPDEYTYSSMLEA 546
++PD TY++++
Sbjct: 797 -----IQPDLVTYNTLISG 810
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 158/381 (41%), Gaps = 49/381 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL-KSRFVYTKLLAILGKAGRPHEALRIFNLM 254
++ G +G + A LD + ++++ + +++ Y +++ K GR EA+++F+ M
Sbjct: 525 VIAGFCSRGRVQAA---LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 581
Query: 255 LEDCNLYPDIAAYHS-------------------------VAVTLGQVGLLKELVKLIER 289
L + P+ Y++ VA+T+ LL + + R
Sbjct: 582 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 641
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + ++ M K L PD+ YN ++N K +F+ + + G++ +
Sbjct: 642 GTEA-YELVEEMGGKG----LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 696
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + G+ + F + + G + Y L+ + G I+ A +
Sbjct: 697 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 756
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME++ + Y L LC GR +A +++++ R +P +T+ LI G
Sbjct: 757 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE-RGIQPDLVTYNTLISGYSMKG 815
Query: 470 HIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ D + I M + P + T NA+++ +N A+ + +E +G T
Sbjct: 816 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE---NGIT---- 868
Query: 529 DGAPLKPDEYTYSSMLEASAT 549
PD+ TY S++E T
Sbjct: 869 ------PDDSTYISLIEGLTT 883
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 19/247 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ K G +AL IF M + + Y ++ L + G ++E KL +
Sbjct: 662 FTYNILINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFD 720
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ + PDLV+YNA++N+ S F + ++ K + P
Sbjct: 721 EAVRRG---------------IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 765
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY M + G+ D + +M + G +TY L+ + +G + +A+
Sbjct: 766 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 825
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI--ISSM 466
M +G T Y L LC NG+ DA +V+++ P + T+ LI +++
Sbjct: 826 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE-NGITPDDSTYISLIEGLTTE 884
Query: 467 DGGHIDD 473
D IDD
Sbjct: 885 DERAIDD 891
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/340 (17%), Positives = 123/340 (36%), Gaps = 32/340 (9%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N +L A ++ +++ L S A+ + + + + L + FR
Sbjct: 426 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLP 485
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+ T+ +++R GK A+ +R M + V Y + C+ GR Q
Sbjct: 486 ----LCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQA 537
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAM 495
A+ ++ +++ P + T+ +I G +D+ + +F M K +P NA+
Sbjct: 538 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 597
Query: 496 LKVYSRNDMFSKA----KELFEETTRANSSGYT------FLSGDGAP------------L 533
+ Y A + E + Y F+ G G L
Sbjct: 598 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 657
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
PD +TY+ ++ + +++ M+ G + + L+ S+ G+ +
Sbjct: 658 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 717
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
FD + G P + + ++ N ++A ++ M
Sbjct: 718 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 161/379 (42%), Gaps = 34/379 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ +R ++ K+ + GL+ G +L G+ + L +
Sbjct: 99 ILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREA 158
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K D + Y+ L+ + GKAGR +A F L+ PD AY+++ +VG+
Sbjct: 159 GIKPD---QVAYSILIDMFGKAGRHEDAAATFR-ELQMSGYLPDSVAYNTLIHAFAKVGM 214
Query: 280 LKELVKLIE------------------------RMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + + + RM + +K M L+P+ +
Sbjct: 215 VDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIG----LQPNEL 270
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y +VLNA + ++Q G +F+++++S + +TY + V ++G + E KM
Sbjct: 271 GYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKM 330
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G + Y L+ + + GK+ EA M+Q+G G VY + GR
Sbjct: 331 RQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRI 390
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNA 494
DA ++ ++K + P +T+T LI + G ++CI +F QH D + + V
Sbjct: 391 NDAERLMAELKDSKLV-PDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAI 449
Query: 495 MLKVYSRNDMFSKAKELFE 513
M+ VY + +SK EL E
Sbjct: 450 MINVYGKARQYSKLAELLE 468
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 149/354 (42%), Gaps = 30/354 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI Y+ + + G+ G + +K +++ D L PD Y AVL
Sbjct: 92 PDIVIYNILILEYGKRGNFSQAMKYFSQLK---------------DEGLLPDSGTYCAVL 136
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+AC K++R++G+KP Y + +++ ++G+++ FR++ SG
Sbjct: 137 SACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYL 196
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
++ Y L+ AF + G +++A + ++ + ++Y + R D L
Sbjct: 197 PDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAK-ARMADQALH 255
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS 500
V K+ +P E+ + ++ + M I +F+ M++ +C T ML VYS
Sbjct: 256 VLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYS 315
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ S A+EL + + + + YS++++ + + ++
Sbjct: 316 KAGFHSAAEELLAKMRQLG-------------FRRNVVAYSTLIDMYGKVGKLQEATRLF 362
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
M GC+ + + +L +AG+ + E L ++ +P + +T ++
Sbjct: 363 STMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLI 416
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 21/235 (8%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +S F E + +L G A +L + L +R++ + Y+ L+ + GK
Sbjct: 295 MQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVA---YSTLIDMYGK 351
Query: 241 AGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
G+ EA R+F+ M + C ++ Y+++ G+ G + + +L+ ++
Sbjct: 352 VGKLQEATRLFSTMKQQGCK--GNLIVYNTMLDMYGKAGRINDAERLMAELK-------- 401
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
D L PD V Y ++NA +++ VF+Q R GLK + + V
Sbjct: 402 -------DSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVY 454
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ +Y + E M KSG K +V + + G A +R + + G
Sbjct: 455 GKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINELG 509
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/302 (18%), Positives = 122/302 (40%), Gaps = 28/302 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
EP +Y A + + +W + + ++ P Y L ++ + +G++
Sbjct: 20 FEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQ 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+F KM G + Y +L+ + + G ++A+ ++ G++ + Y +
Sbjct: 80 HWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSAC 139
Query: 430 CNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCE 486
G E +K +R + KP ++ ++ LI G +D + F+ ++
Sbjct: 140 RKVGNIDKGN---ETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYL 196
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG-----YTFLS-------GDGA--- 531
P+ N ++ +++ M +A +F+E R+ YT + D A
Sbjct: 197 PDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHV 256
Query: 532 -------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
L+P+E Y S+L A A+Q +++ M S C+ ++ + +L S+
Sbjct: 257 LKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSK 316
Query: 585 AG 586
AG
Sbjct: 317 AG 318
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
VY +L + GKAGR ++A R+ L+D L PD Y ++ ++G +E +++ E
Sbjct: 375 IVYNTMLDMYGKAGRINDAERLMA-ELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFE 433
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+ HR + L+ D ++ ++N + Q+ + + + + KSG++P
Sbjct: 434 Q------------HRADG---LKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPD 478
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+E+ G + E RK+ + G G +K
Sbjct: 479 TRILKTVVEIYEDGGMCENAAELLRKINELGPLEGNTLHK 518
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 166/375 (44%), Gaps = 26/375 (6%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ L ++ T K + +R+M Q ++ G A S+L+ +K
Sbjct: 184 VMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNE---MK 240
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K F Y+ L+ L K + E +R L + N+YP++ ++SV L + G +
Sbjct: 241 QKSIPPDIFTYSTLIDALCKLSQ-WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299
Query: 281 KELVKLIERMRQK---PSKRIKNM-------------HRKNWDPVL----EPDLVVYNAV 320
++ +++ M +K P NM R+ +D ++ EP+++ YN +
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+N + V +++ + GLKPS T + + + + G+ FF +M +G
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
T+ L+ +++ G + EA++ +E+R +Y + LC NG+ A
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
EK+ L P IT+T +I G +D+ + + M+D+ C + T N +++ +
Sbjct: 480 TFEKL-PLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538
Query: 500 SRNDMFSKAKELFEE 514
R++ S+ K EE
Sbjct: 539 LRSNKVSEMKAFLEE 553
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 142/332 (42%), Gaps = 24/332 (7%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
V++N +L ++ K +FK+L R++ +P+ YG M + + G + R
Sbjct: 143 VIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLR 202
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
M + Y +++ AF ++G ++ A + + M+Q+ + Y L LC
Sbjct: 203 LMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLS 262
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
+W++ + ++ L + P TF +I G ++D I ++M + +P++ T
Sbjct: 263 QWENVRTLFLEMIHL-NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITY 321
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N ++ Y +A+E+F+ + N S ++P+ +Y+ ++ A +
Sbjct: 322 NMIIDGYGLRGQVDRAREIFD--SMINKS-----------IEPNIISYNILINGYARQKK 368
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+ V + ++ G + LL G+ ++ FD +L AG IP +
Sbjct: 369 IDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP------D 422
Query: 613 MLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
+ + Y K + AM++ FH ER+
Sbjct: 423 LYTHCTLLGGYFKNGLVEEAMSH--FHKLERR 452
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/306 (15%), Positives = 122/306 (39%), Gaps = 24/306 (7%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F +F+Q+ ++ PS ++ ++ ++ Y V FR++ K + ++V +
Sbjct: 57 FSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNS 116
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ + + + ++G+ ++ L L + +DA+ + +K+ +P
Sbjct: 117 CCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEP 176
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
E+ + ++ GH + + M + +PN + ++ + ++ M A L
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLL 236
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE-----YFEYVYKGMALSG 567
E + + + PD +TYS++++A QWE + E ++ + +
Sbjct: 237 NEMKQKS-------------IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNV 283
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
C + + GK E ++E G P + + ++ ++ ++A
Sbjct: 284 CTFNSVIDGL-----CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAR 338
Query: 628 ALINAM 633
+ ++M
Sbjct: 339 EIFDSM 344
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 189/446 (42%), Gaps = 41/446 (9%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+ GL G +A+ V + + L+ D + + L+A KAG +A +F M+
Sbjct: 539 INGLSKLGDVSRALQVYNRMLELELVPD---KVTFNILIAGACKAGNFEQASALFEEMVA 595
Query: 257 DCNLYPDIAAYHSVAVTL---GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
NL PD+ + ++ L GQV ++++ L+ + + P+
Sbjct: 596 K-NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG------------------VPPN 636
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+V YNA+++ S + + +++ SG P + TYG + + ++ + D +
Sbjct: 637 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 696
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
++ G +TY +LV W+ G+ +A+ + M +G Y L LC G
Sbjct: 697 ELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAG 756
Query: 434 RWQDAMLVVEKIKSL--RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE--PN 488
++A + + S R P +T++ LI G ID+ + Q M + C+ PN
Sbjct: 757 DLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPN 816
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I T N+ L + M ++A EL R+ G +S PD T+S++++
Sbjct: 817 IITYNSFLDGLCKQSMMAEACELM----RSLRDGSLRVS-------PDTVTFSTLIDGLC 865
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
Q + V+ M G + + L+ + K +S+++ G P +
Sbjct: 866 KCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMA 634
++ ++ S+ ++A+ L++ MA
Sbjct: 926 TYSVLVDAFCKASHVDEALELLHGMA 951
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 177/448 (39%), Gaps = 86/448 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
L+ GL G QA++VL+ + G D+ + Y L+ L KAG EA R+ M
Sbjct: 713 LVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT---YNTLIDSLCKAGDLEEARRLHGDMS 769
Query: 255 --LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
+ C + P++ Y + L +VG + E +LI+ M RK+ D + P
Sbjct: 770 SRVSRCCV-PNVVTYSVLINGLCKVGRIDEARELIQEM-----------MRKSCDVL--P 815
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK--PSAATYGLAMEVMLQSGKYDLVHE 370
+++ YN+ L+ + + LR L+ P T+ ++ + + G+ D
Sbjct: 816 NIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN 875
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F M G +TY VL+ + K+ A A + +M +GV
Sbjct: 876 VFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVT-------------- 921
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
P IT++ L+ + H+D+ + + M C PN+
Sbjct: 922 ----------------------PDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNV 959
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N+++ ++D +A ++F++ T + L PD+ TY ++++
Sbjct: 960 VTFNSIIDGLCKSDQSGEAFQMFDDMTLKHG------------LAPDKITYCTLIDG--- 1004
Query: 550 AHQWEYFEYVYKGMA--LSGCQLDQTKHAW--LLVEASRAGKCHLLEHAFDSLLEAGEIP 605
F + G A L D +A+ + S+ G + A +LE +P
Sbjct: 1005 -----LFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGD---VSRALHRMLELELVP 1056
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ F ++ A N+E+A AL M
Sbjct: 1057 DKVTFNILIAGACKAGNFEQASALFEEM 1084
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 176/454 (38%), Gaps = 75/454 (16%)
Query: 224 DLKSR------FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQ 276
D+ SR Y+ L+ L K GR EA + M + C++ P+I Y+S L +
Sbjct: 276 DMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCK 335
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
+ E +L+ +R S R+ PD V ++ +++ Q V
Sbjct: 336 QSMTAEACELMRSLRDG-SLRVS------------PDTVTFSTLIDGLCKCGQIDEACSV 382
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F + G P+ TY + + ++ K + H M G +TY VLV AF +
Sbjct: 383 FDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 442
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLE 455
+++EA+ + M RG + + LC + R +A + + + +L+H P +
Sbjct: 443 ASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDM-ALKHGLVPDK 501
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD------HCEPN----IGTVNAMLKVYSR---- 501
IT+ LI G ++ M D +C N +G V+ L+VY+R
Sbjct: 502 ITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLEL 561
Query: 502 ------------------NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
F +A LFEE N L+PD T+ ++
Sbjct: 562 ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN-------------LQPDVMTFGAL 608
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK----CHLLEHAFDSLL 599
++ A Q E + M G + + L+ ++G+ C LE ++
Sbjct: 609 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE----MV 664
Query: 600 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+G +P + + ++ S + A+ L++ +
Sbjct: 665 SSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 170/414 (41%), Gaps = 42/414 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ LL KAG E R + +A Y+ V +L + G E + +E
Sbjct: 147 FTYSTLLRATYKAGGDVE--RTLGFFRRIRSSSRSVADYNIVLQSLCRAG---ETARALE 201
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R + M R + P +V YN ++N S++ +F++L + G P
Sbjct: 202 IFRGE-------MARDG----VAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPD 250
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY ++ + ++G + M+ +TY VL+ + G+I+EA ++
Sbjct: 251 VVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQ 310
Query: 409 NMEQRG--VVGTASVYYELACCLCNNGRWQDAMLVVEKIK--SLRHSKPLEITFTGLIIS 464
M ++ V+ Y LC +A ++ ++ SLR S P +TF+ LI
Sbjct: 311 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS-PDTVTFSTLIDG 369
Query: 465 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G ID+ S+F M PN+ T NA++ + D +A + E G
Sbjct: 370 LCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV---DKGV 426
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL---LV 580
T PD TYS +++A A + + + GMA GC + + L
Sbjct: 427 T----------PDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 476
Query: 581 EASRAGKCHLLEHAFDSL-LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ R+G+ FD + L+ G +P + + ++ +A AL++AM
Sbjct: 477 KSDRSGEAF---QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/546 (18%), Positives = 212/546 (38%), Gaps = 84/546 (15%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
L+ ++G+ + + + ++ L K+ R EA ++F+ M L PD Y ++
Sbjct: 450 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLID 509
Query: 273 TLGQVGLLKELVKLIERMRQKPS----------------KRIKNMHRKNWDPVLEPDLVV 316
L + G + L++ M + R ++ + + L PD V
Sbjct: 510 GLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVT 569
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+N ++ + ++ +F+++ L+P T+G ++ + ++G+ + + M
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G +TY LV + G+I EA + M G V + Y L LC R
Sbjct: 630 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDH---------- 484
DA+ +V ++KS P +T+ L+ G + I++ + M K H
Sbjct: 690 DALQLVSELKSFGW-DPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTL 748
Query: 485 ---------------------------CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
C PN+ T + ++ + +A+EL +E R
Sbjct: 749 IDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMR 808
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEA----SATAHQWEYFEYVYKG-MALSGCQLDQ 572
+ + P+ TY+S L+ S A E + G + +S D
Sbjct: 809 KSCD-----------VLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSP---DT 854
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
+ L+ + G+ + FD ++ G +P+ + + ++ E+A A+I +
Sbjct: 855 VTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIES 914
Query: 633 M---AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 689
M P IT ++ L ++ D+ +LL+ + + + +T +++ +
Sbjct: 915 MVDKGVTPDVIT---YSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSI---IDG 968
Query: 690 LCRSEK 695
LC+S++
Sbjct: 969 LCKSDQ 974
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 158/416 (37%), Gaps = 76/416 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G++ QA ++ + + + D+ + + L+ L KAG+ A I +LM
Sbjct: 573 LIAGACKAGNFEQASALFEEMVAKNLQPDVMT---FGALIDGLCKAGQVEAARDILDLM- 628
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P++ Y+++ L + G ++E + +E M PD +
Sbjct: 629 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV---------------PDSI 673
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y +++ A + + + +L+ G P TY + ++ + +SG+ + +M
Sbjct: 674 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEM 733
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME---QRGVVGTASVYYELACCLCNN 432
G +TY L+ + + G + EA +M R V Y L LC
Sbjct: 734 VGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKV 793
Query: 433 GRWQDAMLVV----------------------------------EKIKSLRHS----KPL 454
GR +A ++ E ++SLR P
Sbjct: 794 GRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPD 853
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
+TF+ LI G D+ ++F M PN+ T N ++ + D +A + E
Sbjct: 854 TVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIE 913
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA-HQWEYFEYVYKGMALSGC 568
G T PD TYS +++A A H E E ++ GMA GC
Sbjct: 914 SMV---DKGVT----------PDVITYSVLVDAFCKASHVDEALELLH-GMASRGC 955
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 146/349 (41%), Gaps = 26/349 (7%)
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL----RKSGLKPSA 349
P+K I ++ R P P+ Y+ +L A +K V + L R S
Sbjct: 127 PAKAI-DLFRSRLPPRCRPNHFTYSTLLRA-----TYKAGGDVERTLGFFRRIRSSSRSV 180
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFR-KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A Y + ++ + ++G+ E FR +MA+ G A +TY ++ + ++ +
Sbjct: 181 ADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFE 240
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+ +RG Y L LC G ++A + + S R P +T++ LI
Sbjct: 241 ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS-RSCVPNVVTYSVLINGLCKV 299
Query: 469 GHIDDCISIFQHM-KDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G ID+ + Q M + C+ PNI T N+ L + M ++A EL R+ G
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM----RSLRDGSLR 355
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+S PD T+S++++ Q + V+ M G + + L+ +A
Sbjct: 356 VS-------PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 408
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
K +S+++ G P + ++ ++ S ++A+ L++ MA
Sbjct: 409 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 457
>gi|297797974|ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
Length = 561
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 202/460 (43%), Gaps = 55/460 (11%)
Query: 158 IRVLVDRLSEREMTAKNW-KFVRIM--NQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
+R L+ R+S++E K K+V+++ + L+F E LG W Q + V
Sbjct: 71 VRSLMSRISDKEPLVKTLDKYVKVVRCDHCFLLFEE---------LGKSDKWLQCLEVFR 121
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
W+ K + + VY+KL++++GK G+ A+ +F+ M ++ PD + Y+++
Sbjct: 122 WMQ--KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM-KNSGCRPDASVYNALITAH 178
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
++ K +E++R K +K M R +P++V YN +L A S + V
Sbjct: 179 LHT---RDKAKALEKVRGYFDK-MKGMER------CQPNVVTYNILLRAFAQSGKVDQVN 228
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+FK L S + P T+ M+ ++G + +M + +T+ VL+ ++
Sbjct: 229 ALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSY 288
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ---DAMLVVEKIKSLRHS 451
++ + + +++ + T + + + N G+ + A V +K+ + +
Sbjct: 289 GKKQEFEKMEQTFKSLMRSKEKPTLPTFNSM---IINYGKARMIDKAEWVFKKMNDMNYM 345
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKE 510
P IT+ +I+ G + IF+ + D T+NAML+VY RN ++ +A +
Sbjct: 346 -PSFITYECMIMMYGYCGSVSRAREIFEEVVDSERVLKASTLNAMLEVYCRNGLYMEADK 404
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
LF N+S + + PD TY + +A A E+ + + K M G
Sbjct: 405 LFH-----NASAFR--------VHPDASTYKFLYKAYTKADMKEHVQILMKKMEKDGIFS 451
Query: 571 DQTKHAWLLVEAS---RAG------KCHLLEHAFDSLLEA 601
Q +L + RAG C L H DS + A
Sbjct: 452 GQDYLVRILKTGNNLVRAGHETVLRTCPFLSHDDDSTVIA 491
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 35/246 (14%)
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM---- 466
+QR + VY +L + G+ + AM + ++K+ +P + LI + +
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN-SGCRPDASVYNALITAHLHTRD 183
Query: 467 DGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
++ F MK + C+PN+ T N +L+ ++++ + LF++
Sbjct: 184 KAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL--------- 234
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
D +P+ PD YT++ +++A + E V M + C+ D L+ +
Sbjct: 235 ----DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---------INAMAY 635
+ +E F SL+ + E P F M+I NY KA + +N M Y
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMII------NYGKARMIDKAEWVFKKMNDMNY 344
Query: 636 APFHIT 641
P IT
Sbjct: 345 MPSFIT 350
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 151/373 (40%), Gaps = 55/373 (14%)
Query: 310 LEPDLVVYNAVL---NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+ PD + Y+ ++ N C ++Q + W F ++ + P A TY ++V + GKYD
Sbjct: 74 IRPDNITYSTLISCANRC--NYQDAAMAW-FDRMHDAQCVPDAVTYSTMIDVYGKVGKYD 130
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ + KSG +TY +VR F G I+ AV+ M+ G+ + VY +
Sbjct: 131 EAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMI 190
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 486
CL GR A+ V +++K KP +T + ++ G + + + IF HM+
Sbjct: 191 SCLGRAGRMGHALKVFQEMKQ-AGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQDLA 249
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+I NA++K+ + +A++ E +P+++TY +M+
Sbjct: 250 CDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGH-------------QPNDWTYRNMISL 296
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
Y GMA VEA R F L+EAG P
Sbjct: 297 -----------YAKNGMA---------------VEAQR---------MFSQLVEAGYQPD 321
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLN 666
+ +T +L +YEK +++ M A ER W + + + + E L +
Sbjct: 322 VMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLWCVILNLLDACDTDVEFEILRS 381
Query: 667 ALCNCNAASSEIT 679
L CN I
Sbjct: 382 CLRMCNPTMDNIV 394
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 136/345 (39%), Gaps = 67/345 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y+ L++ + A+ F+ M D PD Y ++ G+VG E V L E
Sbjct: 79 ITYSTLISCANRCNYQDAAMAWFDRM-HDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYE 137
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ + W +PD V Y ++ + +F +++ SG++P
Sbjct: 138 SVK-----------KSGW----KPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPG 182
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+ Y + + + ++G+ + F++M ++G A+T ++ + GK+ E +
Sbjct: 183 SVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFH 242
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+M Q +LAC + I + +I +
Sbjct: 243 HMRQ-----------DLACDI--------------------------IVYNAVIKMCREA 265
Query: 469 GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G + + + M ++ +PN T M+ +Y++N M +A+ +F + A GY
Sbjct: 266 GLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEA---GY---- 318
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
+PD +Y+S+L+ A +E + + M + C D+
Sbjct: 319 ------QPDVMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDE 357
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 23/206 (11%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T G M++L G G A+S+ D +K VY +++ LG+AGR AL
Sbjct: 150 TYGTMVRLF---GRAGYISAAVSIFD---EMKGSGIQPGSVVYNIMISCLGRAGRMGHAL 203
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
++F M + + P+ +V + G + E + + MRQ
Sbjct: 204 KVFQEM-KQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQD--------------- 247
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
L D++VYNAV+ C + +++ + G +P+ TY + + ++G
Sbjct: 248 -LACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEA 306
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAF 394
F ++ ++G ++Y L++ +
Sbjct: 307 QRMFSQLVEAGYQPDVMSYTSLLQGY 332
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 130/319 (40%), Gaps = 31/319 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y ++A GR AL I M E + P+ Y +V +VG + E VK+ +
Sbjct: 516 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 575
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K ++P+ V+YNA++ + ++ + G+ +
Sbjct: 576 MLTKGE--------------VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 621
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
ATY L + + G+ +E +M G A TY +L+ +EG + +A+ N
Sbjct: 622 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 681
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +RGV T Y L L G+ Q+ L E ++ R +P + + LI S
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR--RGIRPDLVLYNALINSHSTS 739
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G+ID I M K P+ T N +++ +A++L +E T
Sbjct: 740 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG-------- 791
Query: 528 GDGAPLKPDEYTYSSMLEA 546
++PD TY++++
Sbjct: 792 -----IQPDLVTYNTLISG 805
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 158/381 (41%), Gaps = 49/381 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL-KSRFVYTKLLAILGKAGRPHEALRIFNLM 254
++ G +G + A LD + ++++ + +++ Y +++ K GR EA+++F+ M
Sbjct: 520 VIAGFCSRGRVQAA---LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 576
Query: 255 LEDCNLYPDIAAYHS-------------------------VAVTLGQVGLLKELVKLIER 289
L + P+ Y++ VA+T+ LL + + R
Sbjct: 577 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 636
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + ++ M K L PD+ YN ++N K +F+ + + G++ +
Sbjct: 637 GTEA-YELVEEMGGKG----LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 691
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + G+ + F + + G + Y L+ + G I+ A +
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME++ + Y L LC GR +A +++++ R +P +T+ LI G
Sbjct: 752 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE-RGIQPDLVTYNTLISGYSMKG 810
Query: 470 HIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ D + I M + P + T NA+++ +N A+ + +E +G T
Sbjct: 811 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE---NGIT---- 863
Query: 529 DGAPLKPDEYTYSSMLEASAT 549
PD+ TY S++E T
Sbjct: 864 ------PDDSTYISLIEGLTT 878
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 22/295 (7%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + G+ T L+ L G +A +++ + G D+ F Y L+ K
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV---FTYNILINGHCK 668
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G +AL IF M + + Y ++ L + G ++E KL + ++
Sbjct: 669 EGNVKKALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG------ 721
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+ PDLV+YNA++N+ S F + ++ K + P TY M +
Sbjct: 722 ---------IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 772
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
G+ D + +M + G +TY L+ + +G + +A+ M +G T
Sbjct: 773 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 832
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI--ISSMDGGHIDD 473
Y L LC NG+ DA +V+++ P + T+ LI +++ D IDD
Sbjct: 833 TYNALIQGLCKNGQGDDAENMVKEMVE-NGITPDDSTYISLIEGLTTEDERAIDD 886
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/340 (17%), Positives = 123/340 (36%), Gaps = 32/340 (9%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N +L A ++ +++ L S A+ + + + + L + FR
Sbjct: 421 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLP 480
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+ T+ +++R GK A+ +R M + V Y + C+ GR Q
Sbjct: 481 ----LCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQA 532
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAM 495
A+ ++ +++ P + T+ +I G +D+ + +F M K +P NA+
Sbjct: 533 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 592
Query: 496 LKVYSRNDMFSKA----KELFEETTRANSSGYT------FLSGDGAP------------L 533
+ Y A + E + Y F+ G G L
Sbjct: 593 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 652
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
PD +TY+ ++ + +++ M+ G + + L+ S+ G+ +
Sbjct: 653 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 712
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
FD + G P + + ++ N ++A ++ M
Sbjct: 713 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 139/323 (43%), Gaps = 15/323 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PDL+ N ++N + + ++ +G +P+ TYG + M +SG +
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDL 252
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
RKM +TY +++ ++G++++A++ ME +G+ Y L C+
Sbjct: 253 LRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
GRW D ++ + + R P +TF+ LI S + G + + ++ M EPN
Sbjct: 313 FGRWDDGAQLLRDMIT-RKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N+++ + +A ++ + + G PD +TY+ ++ A
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMD-----------LMVSKGC--DPDIWTYNILINGFCKA 418
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
Q + +++ M+L G D ++ L+ ++ K + + F ++ G P + +
Sbjct: 419 KQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTY 478
Query: 611 TEMLIQAIVQSNYEKAVALINAM 633
+L E+A+ +++ M
Sbjct: 479 AILLDGLCDNGELEEALGILDQM 501
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 138/351 (39%), Gaps = 31/351 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ LL L GR EA+ + + M+ ++ PD+ +++ L + E V LI R
Sbjct: 162 TFNTLLNGLCLEGRVFEAVELVDCMVLSQHV-PDLITLNTIVNGLCLKDRVSEAVDLIAR 220
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +P+ Y +LN S + +++ +KP
Sbjct: 221 MMANGC---------------QPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHV 265
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + ++ + + G+ D FF +M G TY L+ +F G+ ++ +R+
Sbjct: 266 VTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRD 325
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M R + + L L G+ +A + ++ + R +P IT+ LI +
Sbjct: 326 MITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMIT-RGIEPNTITYNSLIYGLCNDK 384
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+D+ + M C+P+I T N ++ + + LF + + L G
Sbjct: 385 RLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMS---------LRG 435
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ D TYS++++ + + + V++ M G +A LL
Sbjct: 436 ----MIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILL 482
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 30/317 (9%)
Query: 215 WVYGLKDKRDLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
W G + RD+ +R ++ L+ L K G+ EA ++N M+ + P+ Y+
Sbjct: 316 WDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR-GIEPNTITYN 374
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S+ L L E ++++ M K +PD+ YN ++N +
Sbjct: 375 SLIYGLCNDKRLDEANQMMDLMVSKGC---------------DPDIWTYNILINGFCKAK 419
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
Q +F+++ G+ TY ++ QS K + + F++M G G +TY
Sbjct: 420 QVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYA 479
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS- 447
+L+ + G++ EA+ + M + + +Y + +CN + DA + + S
Sbjct: 480 ILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSK 539
Query: 448 --LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM 504
R + I +GL S + + ++F+ MK D EP+ T N +++ + R +
Sbjct: 540 GVKRDIQSYNIMLSGLCKRS----SLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGND 595
Query: 505 FSKAKELFEETTRANSS 521
+ + +L EE R S
Sbjct: 596 ITTSVQLIEEMKRCGFS 612
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 79/192 (41%), Gaps = 16/192 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ L+ ++ + A ++F M+ ++P I Y + L G L+E + ++++
Sbjct: 442 TYSTLIQGFCQSRKLIVAKKVFQEMVSQ-GVHPGIMTYAILLDGLCDNGELEEALGILDQ 500
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + +E D+ +YN +++ +++ + +F L G+K
Sbjct: 501 MHKCK---------------MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDI 545
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+Y + + + + FRKM + G TY L+RA I +V +
Sbjct: 546 QSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEE 605
Query: 410 MEQRGVVGTASV 421
M++ G AS
Sbjct: 606 MKRCGFSSDAST 617
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 20/171 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL D G +A+ +LD ++ K + D+ +Y ++ + A + +A +F L
Sbjct: 481 LLDGLCDNGELEEALGILDQMHKCKMELDIG---IYNIIIHGMCNANKVDDAWSLF-CSL 536
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ DI +Y+ + L + L E L +M++ EPD
Sbjct: 537 PSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDG---------------YEPDGC 581
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
YN ++ A + + + +++++ G A+T + M+ ML SG+ D
Sbjct: 582 TYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMD-MLSSGELD 631
>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 375
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 150/388 (38%), Gaps = 68/388 (17%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDRALYVLNGMIKS--GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ + +MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKKEMFGEAYNLVKELLDKG-------------LDPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFDSLLEAGEIPH 606
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD---------- 294
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNED---------RIS 657
+N YAP ++ E F + D RI
Sbjct: 295 -----------------------MNRWKYAPNLVSHNTLMEGFYKDGDIRNALVIWARIL 331
Query: 658 RDKLEK-------LLNALCNCNAASSEI 678
R+ LE L LC+CN S I
Sbjct: 332 RNGLEPDIISYNITLKGLCSCNRISDAI 359
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 128/303 (42%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K+ ++ Y L+ K G ++L + M
Sbjct: 65 MMRGLFDNGKVDEVISIWEL---MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L + ++ M + K P++
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCK---------------PNVH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N V + +++ VF+++ P+ TY + + + + + +++
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + K+ A+ + +G ++ L LC+ G+
Sbjct: 226 LDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
Q A+ + + +++ P ++ L+ G I + + I+ +++ EP+I + N
Sbjct: 286 QLALSLYFDMNRWKYA-PNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNI 344
Query: 495 MLK 497
LK
Sbjct: 345 TLK 347
>gi|255661010|gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 376
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 16/274 (5%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D + PD VVYNA+LN + + K F +++ + K G + S A++ + M + +G+ D
Sbjct: 18 DSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEGSR-SVASFNIMMRGLFDNGRVD 76
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
V+ + M K G ++TY +LV F + G IN+++ + E++G A Y +
Sbjct: 77 EVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIXERKGRXXDALAYXPMI 136
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHC 485
LC + + A+ V+ + KP + LI + +D I +F+ M HC
Sbjct: 137 NGLCKETKLEKAVSVLNGMIQ-SGCKPNTHVYNALINGLIGASKSEDAIRVFREMGFPHC 195
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
P I T + ++ +++ FS+A +L +E L P TYS +++
Sbjct: 196 SPTIVTYSILINGLCKSERFSEAYDLVKEMLEKG-------------LTPSVITYSLLMK 242
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
H+ E ++ + G + D H L+
Sbjct: 243 GLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILI 276
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 61/323 (18%), Positives = 133/323 (41%), Gaps = 21/323 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + S+ + +K ++ Y L+ K G +++L + +
Sbjct: 65 MMRGLFDNGRVDEVNSIWEL---MKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIX- 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY + L + L++ V ++ M Q K P+
Sbjct: 121 ERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCK---------------PNTH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYNA++N + + + + VF+++ P+ TY + + + +S ++ ++ ++M
Sbjct: 166 VYNALINGLIGASKSEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEM 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +TY +L++ K+ A+ + ++G ++ L LC+ +
Sbjct: 226 LEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKT 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
Q A+ + + S P +T L+ G I + + ++ +K+ +P+I + N
Sbjct: 286 QHALSLYLDMNRWNCS-PNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNI 344
Query: 495 MLKVYSRNDMFSKAKELFEETTR 517
LK + S A + R
Sbjct: 345 TLKGLCSCNRISDAILFLHDAVR 367
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 160/373 (42%), Gaps = 44/373 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-------LLKEL 283
Y LL K G A ++ + M C + PD A Y + + G LLKE+
Sbjct: 162 YNALLKGYVKIGSLKNAEQVLDEM-SQCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 220
Query: 284 ------------VKLIERMR-----QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
+++ R QK ++ MH + PD YN +++
Sbjct: 221 EADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASG----VRPDRHFYNVMIDTFGK 276
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ F ++R+ G++P T+ ++ + G++D E F +M +S +G T
Sbjct: 277 YNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTT 336
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y +++ EE + A + M+++G+V Y L +GR+++A+ +E +K
Sbjct: 337 YNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMK 396
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMF 505
+ KP + L+ + G D +++ + M+ D E + +N+++ + +
Sbjct: 397 A-DGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRI 455
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
++A + + F+ +G L+PD TY+++++A Q+E +Y+ M
Sbjct: 456 AEAFSVLQ-----------FMKENG--LRPDVITYTTLMKALIRVEQFEKVPVIYEEMIT 502
Query: 566 SGCQLDQTKHAWL 578
SGC D+ A L
Sbjct: 503 SGCAPDRKARAML 515
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 146/339 (43%), Gaps = 29/339 (8%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAIL 238
M+Q G+ E L+ G W A +L + G+K S +V++++LA
Sbjct: 185 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK-----PSSYVFSRILAGF 239
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G +A + M + PD Y+ + T G+ L + +RMR++
Sbjct: 240 RDRGEWQKAFAVLREM-HASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEG---- 294
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
+EPD+V +N +++A + +F ++R+S TY + + +
Sbjct: 295 -----------IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINL 343
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ + +++ V +M + G +TY LV + G+ EAV + M+ G+ +
Sbjct: 344 LGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPS 403
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKS--LRHSKPLEITFTGLIISSMDGGHIDDCIS 476
+++Y+ L G A+ VV+ +++ L S + LI + + I + S
Sbjct: 404 STMYHALVNAYAQRGLADHALNVVKAMRADGLEAST---VVLNSLINAFGEDRRIAEAFS 460
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+ Q MK++ P++ T ++K R + F K ++EE
Sbjct: 461 VLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEE 499
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
LG++ W ++L +K++ + + YT L+ + G++GR EA+ M D
Sbjct: 344 LGEEQRWEGVEAMLAE---MKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD-G 399
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L P YH++ Q GL + +++ MR LE VV N+
Sbjct: 400 LKPSSTMYHALVNAYAQRGLADHALNVVKAMRADG---------------LEASTVVLNS 444
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++NA + F V + ++++GL+P TY M+ +++ +++ V + +M SG
Sbjct: 445 LINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSG 504
Query: 380 EA 381
A
Sbjct: 505 CA 506
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 133/363 (36%), Gaps = 56/363 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P YNA+L V K V ++ + G+ P ATY L ++ ++G+++
Sbjct: 155 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 214
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
++M G + + ++ F + G+ +A A +R M GV Y +
Sbjct: 215 ILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 274
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE-- 486
AM ++++ +P +T+ LI + GG D I +F M++ +C
Sbjct: 275 GKYNCLGHAMDAFDRMRE-EGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLG 333
Query: 487 ---------------------------------PNIGTVNAMLKVYSRNDMFSKAKELFE 513
PNI T ++ VY R+ F +A + E
Sbjct: 334 TTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIE 393
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
+ DG LKP Y +++ A A ++ V K M G +
Sbjct: 394 A-----------MKADG--LKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 440
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLL---EAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
L+ + G+ + AF L E G P + +T ++ I +EK +
Sbjct: 441 VLNSLI---NAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIY 497
Query: 631 NAM 633
M
Sbjct: 498 EEM 500
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/339 (17%), Positives = 136/339 (40%), Gaps = 18/339 (5%)
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ +M+ + LEPD +++ +++A + + + GL P + +
Sbjct: 72 VPSMYCGGGESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALIS 131
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALT--YKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + + F + +GE I T Y L++ + + G + A + M Q GV
Sbjct: 132 SLGSARRVAEAEALFLEFFLAGE-IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGV 190
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ Y L GRW+ A ++++++++ KP F+ ++ D G
Sbjct: 191 APDEATYSLLVDAYTRAGRWESARILLKEMEA-DGVKPSSYVFSRILAGFRDRGEWQKAF 249
Query: 476 SIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
++ + M P+ N M+ + + + A + F+ R G ++
Sbjct: 250 AVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFD---RMREEG----------IE 296
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
PD T++++++A + + ++ M S C L T + ++ + +E
Sbjct: 297 PDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAM 356
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ E G +P+ + +T ++ +++AV I AM
Sbjct: 357 LAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAM 395
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 152/359 (42%), Gaps = 46/359 (12%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L P+I Y ++ L + G +E +K++ M+ D L PD+ YN
Sbjct: 473 LKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK---------------DQGLSPDVFCYNT 517
Query: 320 VL-NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
V+ C +G ++ + + K GLKP+ TYG + ++G+ F +M S
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAK-GLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS 576
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G A + L+ + ++G +A A R M +GV+ + L L NG+ Q+A
Sbjct: 577 GIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEA 636
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE----PNIGTVNA 494
M V ++ + P T+T LI + G D + F+ D C+ PNI T NA
Sbjct: 637 MGVFSELLD-KGLVPDVFTYTSLISNLCKEG---DLKAAFELHDDMCKKGINPNIVTYNA 692
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP---LKPDEYTYSSMLEASA-TA 550
++ + +KA+ELF DG P L + TYS+++ +A
Sbjct: 693 LINGLCKLGEIAKARELF----------------DGIPEKGLARNSVTYSTIIAGYCKSA 736
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ E F+ ++ GM L G D + L+ +AG F ++E G P F
Sbjct: 737 NLTEAFQ-LFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAF 794
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 161/392 (41%), Gaps = 48/392 (12%)
Query: 169 EMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR 228
EM A F+ +++ SG+ + L+ G G+ +A + + D+ L
Sbjct: 562 EMQAAERSFIEMLD-SGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCML---DQGVLPDV 617
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++ L+ L K G+ EA+ +F+ +L D L PD+ Y S+ L + G LK +L +
Sbjct: 618 QTHSVLIHGLSKNGKLQEAMGVFSELL-DKGLVPDVFTYTSLISNLCKEGDLKAAFELHD 676
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K + P++V YNA++N + +F + + GL +
Sbjct: 677 DMCKKG---------------INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARN 721
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+ TY + +S + F M G + Y L+ + G +A++
Sbjct: 722 SVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFL 781
Query: 409 NMEQRGVVGTASV------YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
M + G+ T + +++L G+ +A +VE + H P +T+T LI
Sbjct: 782 GMVEEGIASTPAFNALIDGFFKL-------GKLIEAYQLVEDMVD-NHITPNHVTYTILI 833
Query: 463 ISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G+I + +F M K + PN+ T ++L Y+R S+ LF+E
Sbjct: 834 EYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMV----- 888
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+KPD+ +S M++A W
Sbjct: 889 --------ARGIKPDDLAWSVMVDAHLKEGNW 912
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/462 (19%), Positives = 170/462 (36%), Gaps = 71/462 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT L+ + G+ E + +E+ P++ Y V L + G + E ++L
Sbjct: 233 YTYTNLINAYCRVGKVEEGKHVL-FDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKR 291
Query: 289 RM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M RQK S K+M + + L+PD V Y A++N V
Sbjct: 292 SMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQS 351
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
G F V +++ +K + TY + + + G + + F +M G TY
Sbjct: 352 DIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYN 411
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ +++ + +A + +++ + A + + LC+ G A + +++ S
Sbjct: 412 CLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISW 471
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
KP + +T ++ + G ++ I I MKD P++ N ++ + + +
Sbjct: 472 -GLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEE 530
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
K E LKP+ YTY + + A + + E + M SG
Sbjct: 531 GKSYLVEMI-------------AKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577
Query: 568 -----------------------------CQLDQ------TKHAWLLVEASRAGKCHLLE 592
C LDQ H+ L+ S+ GK
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
F LL+ G +P +T ++ + + + A L + M
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMC 679
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 127/307 (41%), Gaps = 25/307 (8%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+FW + + P TY + + GK + M + G +TY V++
Sbjct: 216 LFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIA 275
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
G ++EA+ R+M +G++ +Y L C R + +++++ ++ K
Sbjct: 276 GLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTM-GLK 334
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P + +T LI + I + + M + N T A++ + KA++L
Sbjct: 335 PDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDL 394
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F E T +KPD TY+ ++E ++ + E Y+ + + + +
Sbjct: 395 FSEMTMMG-------------IKPDIQTYNCLIEGY---YKVQNMEKAYE-LLIEIKKEN 437
Query: 572 QTKHAWLLVEASRAGKCHL--LEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
T +A+ + A G CH L A F ++ G P+ + +T ++ + + +E+A
Sbjct: 438 LTANAY-MCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEA 496
Query: 627 VALINAM 633
+ ++ M
Sbjct: 497 IKILGVM 503
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 106/254 (41%), Gaps = 20/254 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
FVY L+ KAG +AL +F M+E+ A++++ ++G L E +L+E
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGMVEEG--IASTPAFNALIDGFFKLGKLIEAYQLVE 815
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M D + P+ V Y ++ K +F +++K + P+
Sbjct: 816 DM---------------VDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPN 860
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + G+ + F +M G L + V+V A +EG +A+ V
Sbjct: 861 VLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVD 920
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD- 467
+M GV ++Y L LC + + + V+++++ + L + G ++
Sbjct: 921 DMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVE--KQGSKLSLATCGTLVCCFHR 978
Query: 468 GGHIDDCISIFQHM 481
G D+ + + + M
Sbjct: 979 AGRTDEALRVLESM 992
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/394 (20%), Positives = 173/394 (43%), Gaps = 36/394 (9%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
G + T + L+ G +G +A L +V + ++ + + L+ + G
Sbjct: 223 GCLLTNVSVKVLVNGFCKEGRVEEA---LRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
++AL I + M+E PD+ Y+S+ + ++G ++ ++++++M +
Sbjct: 280 NDALDIVDFMIEK-GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECS-------- 330
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
P+ V YN +++A ++ + + + L GL P T+ ++ + S
Sbjct: 331 -------PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN 383
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
D+ E F +M G TY +L+ + E ++ EA+ ++ ME G A VY
Sbjct: 384 QDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNT 443
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKD 483
L LC + R +DA + ++++ L S+ +T+ LI +++ + Q + +
Sbjct: 444 LIDGLCKSRRIEDAEEIFDQMELLGVSRS-SVTYNTLIDGLCKNKRVEEASQLMDQMIME 502
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
+P+ T N++L + R KA ++ + ++ +G +PD +TY ++
Sbjct: 503 GLKPDKFTYNSLLTYFCRVGDIEKAGDIVQT-----------MASNGC--EPDIFTYGTL 549
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+ A + + + + + + G L T HA+
Sbjct: 550 IGGLCRAGRVDVASKLLRSVQMKGIVL--TPHAY 581
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 122/285 (42%), Gaps = 15/285 (5%)
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K ++ +H K + + D+ +N ++ A +HQ + + +++ GLKP T+
Sbjct: 140 KLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTL 199
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
M+ ++ G + + ++M G + ++ KVLV F +EG++ EA+ V + + G
Sbjct: 200 MQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGF 259
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ L C G DA+ +V+ + + P T+ LI G + I
Sbjct: 260 SPDQVTFNSLVNGFCRIGNVNDALDIVDFMIE-KGFDPDVYTYNSLISGMCKLGEFEKAI 318
Query: 476 SIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
I Q M C PN T N ++ + + A +L L G L
Sbjct: 319 EILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR-----------ILVSKG--LL 365
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
PD T++++++ + + +++ M GC+ D+ ++ L+
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILI 410
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 152/356 (42%), Gaps = 26/356 (7%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+++VLV+ + + +FV +++ G + L+ G G+ A+ ++D++
Sbjct: 230 SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFM 289
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLG 275
D+ + Y L++ + K G +A+ I ++L +C+ P+ Y+++ L
Sbjct: 290 IEKGFDPDV---YTYNSLISGMCKLGEFEKAIEILQQMILRECS--PNTVTYNTLISAL- 343
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
++ + ++ R L PD+ +N ++ S
Sbjct: 344 --------------CKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAME 389
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F++++ G KP TY + ++ + + ++M SG A A+ Y L+
Sbjct: 390 MFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLC 449
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ +I +A ME GV ++ Y L LC N R ++A +++++ + KP +
Sbjct: 450 KSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQM-IMEGLKPDK 508
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI---GTVNAMLKVYSRNDMFSK 507
T+ L+ G I+ I Q M + CEP+I GT+ L R D+ SK
Sbjct: 509 FTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 10/172 (5%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN +++ + + + + Q+ GLKP TY + + G + + +
Sbjct: 474 VTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQT 533
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
MA +G TY L+ G+++ A +R+++ +G+V T Y + L R
Sbjct: 534 MASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593
Query: 435 WQDAMLVVEKIKSLRHSKPLE-----ITFTGLIISSMDGGHIDDCISIFQHM 481
++ M + ++ + S P + I F GL GG I + I M
Sbjct: 594 TKEGMRLFREM--MEKSDPPDALTHKIVFRGL---CNGGGPIQEAIDFTVEM 640
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 157/381 (41%), Gaps = 39/381 (10%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y ++ + G + E +KL+ M + P+ V YNA L
Sbjct: 284 PDVIIYSTLVNGFSEHGRVDEALKLLNTM------------------LCRPNTVCYNAAL 325
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W+ V + ++ + P+ AT+ + + Q+ + E +M K G
Sbjct: 326 KGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYM 385
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
++Y ++ F ++ + ++A+ +++M + T S L C LC RW DA+ +
Sbjct: 386 PDVVSYNTIISCFSDQARADDALKLLKSMLCKP--DTISFNAVLKC-LCKAKRWYDAVEL 442
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
V K+ + + E+TF LI S G + D I +F+ M K C P+I T ++++ +S
Sbjct: 443 VAKMLK-KDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFS 501
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ A +LF P + D ++Y++ L+ A +W+ +
Sbjct: 502 EQGLDEMAFDLFRSM----------------PCRADIFSYNATLKGLCMAARWDDAGELI 545
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M C ++ L+ + G + ++ + + G P + ++ Q
Sbjct: 546 ADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQ 605
Query: 621 SNYEKAVALINAMAYAPFHIT 641
+ A+ ++ M P I+
Sbjct: 606 GRLDDALKFLSTMPCEPDTIS 626
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 130/317 (41%), Gaps = 39/317 (12%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ +Y+++ + +KL++ M + +PD + +NAVL
Sbjct: 386 PDVVSYNTIISCFSDQARADDALKLLKSM------------------LCKPDTISFNAVL 427
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W + ++ K + + T+ + ++ + Q+G+ E F M K
Sbjct: 428 KCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCM 487
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+TY L+ F E+G A R+M R + + + + LC RW DA +
Sbjct: 488 PDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKG---LCMAARWDDAGEL 544
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
+ + + P E+TF LI S G ++ I +++ M + P+I T NA++ YS
Sbjct: 545 IADMVT-EDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYS 603
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
A + FLS P +PD +Y+S+L+ A +W+ E +
Sbjct: 604 EQGRLDDALK--------------FLS--TMPCEPDTISYNSILKGLCRAERWKDAEKLV 647
Query: 561 KGMALSGCQLDQTKHAW 577
M C ++ +
Sbjct: 648 TEMLRKNCTPNEVTFKY 664
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 136/329 (41%), Gaps = 43/329 (13%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN VL + QW+ + +++ ++ P+ T+ + Q+G D
Sbjct: 212 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 271
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-C 428
E +M K G + Y LV F E G+++EA+ + M R +V Y A
Sbjct: 272 ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR----PNTVCYNAALKG 327
Query: 429 LCNNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE- 486
LC GRW++ L+ E ++ + P + TF+ LI S ++ + + + M+ +
Sbjct: 328 LCIAGRWEEVGELIAEMVR--KDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYM 385
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ + N ++ +S A +L + KPD +++++L+
Sbjct: 386 PDVVSYNTIISCFSDQARADDALKLLKSML----------------CKPDTISFNAVLKC 429
Query: 547 SATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
A +W + E V K M C++++ L+ DSL + G++
Sbjct: 430 LCKAKRWYDAVELVAK-MLKKDCRINEMTFNILI----------------DSLCQNGQVK 472
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ E++ + + +LIN +
Sbjct: 473 DAIEVFELMPKYRCMPDIVTYSSLINGFS 501
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 30/265 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLM 254
+LK L W A+ ++ + K+D + + + L+ L + G+ +A+ +F LM
Sbjct: 426 VLKCLCKAKRWYDAVELVAKML----KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELM 481
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PDI Y S+ + GL + L M P + D+
Sbjct: 482 PKY-RCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCR---------------ADI 522
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YNA L + +W + + P+ T+ + + + Q G + + + +
Sbjct: 523 FSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQ 582
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K G TY L+ + E+G++++A+ + M T S Y + LC R
Sbjct: 583 MPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEP--DTIS-YNSILKGLCRAER 639
Query: 435 WQDA-MLVVEKIKSLRHSKPLEITF 458
W+DA LV E ++ ++ P E+TF
Sbjct: 640 WKDAEKLVTEMLR--KNCTPNEVTF 662
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 42/261 (16%)
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 488
LC R DA V+E +K+ + ++ L+ G + D + + + N
Sbjct: 126 LCARRRLADAERVLEALKASGAAD--AVSHNTLVAGYCRDGSLGDAERVVEAARASGTAN 183
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T A++ Y R+ + A L P+ PD YTY+++L+
Sbjct: 184 VVTYTALIDGYCRSGRLADALRLIASM----------------PVAPDTYTYNTVLKGLC 227
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEI 604
A QWE E + + M + C ++ A + + G LL+ A + LLE G
Sbjct: 228 CAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNG---LLDRAVE-LLEQMPKYGCT 283
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER----------QWTELFESNED 654
P + ++ ++ ++A+ L+N M P + +W E+ E +
Sbjct: 284 PDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAE 343
Query: 655 RISRD------KLEKLLNALC 669
+ +D L+N+LC
Sbjct: 344 MVRKDCPPNDATFSTLINSLC 364
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 173/408 (42%), Gaps = 36/408 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F YT LL L + EA + ++M ED N P++ +Y +V + G + + L
Sbjct: 216 FSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLF 275
Query: 288 ERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+M + + + + + ++ D + P+ YN++++ + S
Sbjct: 276 CKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSS 335
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
QW + K++ + G +P+ TY + ++ + +SG + E F M +SG+ A TY
Sbjct: 336 GQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTY 395
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + EG + + M Q G+ V+ C GR +A L K++
Sbjct: 396 GSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQ 455
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFS 506
+ P + +T +I G +DD +S F Q + D P+I T N ++ ++ + +
Sbjct: 456 -QGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWE 514
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
KA+ELF E + G P P+ T++SM++ + ++ M +
Sbjct: 515 KAEELFYE-----------MMDRGIP--PNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA 561
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
G + + + ++ AG+ + D +L G P + F +L
Sbjct: 562 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL 609
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 127/285 (44%), Gaps = 19/285 (6%)
Query: 336 VFKQLRKSGLK---PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+F ++ ++G K P AT+G+ + +G +L ++ K+G A+T+ L+R
Sbjct: 128 MFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLR 187
Query: 393 AFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI-KSLRH 450
E + ++A+ V R M + G Y L LC + ++A ++ + + +
Sbjct: 188 TLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDN 247
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
P +++T +I G + ++F M DH PN+ T N+++ + KA+
Sbjct: 248 CPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAE 307
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+ ++ + + P+ TY+S++ ++ QW + K M+ G +
Sbjct: 308 AVLQQMIDEH-------------IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQR 354
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ ++ L+ ++G F+S++++G+ P+ + +L
Sbjct: 355 PNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLL 399
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/389 (19%), Positives = 147/389 (37%), Gaps = 65/389 (16%)
Query: 275 GQVGLLKELVKLIER------MRQKPSKRIKNMHR--KNWDPVLEPDLVVYNAVLNACVP 326
G + L +L+ + R +R P+ + +R + + PD+ + +++ C
Sbjct: 97 GSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDIATFGILISCCCD 156
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY-DLVHEFFRKMAKSGEAIGAL 385
+ F Q+ K+GL+ A T+ + + + D ++ R+M + G
Sbjct: 157 AGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVF 216
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRG------VVGTASVY------------YELAC 427
+Y L++ E K EA + M + G VV +V Y L C
Sbjct: 217 SYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFC 276
Query: 428 CLCNNGRWQDAMLVVEKIKSL------------------RHSKPLEITFTGLIISSMDGG 469
+ ++G + + I L H P T+ LI + G
Sbjct: 277 KMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSG 336
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ + I + M +D PN+ T + ++ ++ + ++A+E+F ++
Sbjct: 337 QWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQ-------- 388
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
KP+ TY S+L AT V M +G + +H + +E KC
Sbjct: 389 -----KPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG--MRPGRHVF-NIEIYAYCKC 440
Query: 589 HLLEHA---FDSLLEAGEIPHPLFFTEML 614
L+ A F+ + + G +P + +T ++
Sbjct: 441 GRLDEASLTFNKMQQQGFMPDIVAYTTVI 469
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 165/412 (40%), Gaps = 42/412 (10%)
Query: 173 KNWKFVRIMNQSGLM---FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF 229
K WK + +M + GL + G ++ LL + +A S + + L
Sbjct: 742 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS------EMIRQGILPDTV 795
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VYT L+ K G A + F M ++ PD+ Y ++ Q+G + E KL
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 854
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K LEPD V + ++N + K F V + ++G P+
Sbjct: 855 MFCKG---------------LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 899
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY ++ + + G D +E +M K G TY +V + G I EAV V
Sbjct: 900 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 959
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
E G+ Y L C +G A +++++ + +P +TF L+ G
Sbjct: 960 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHG 1018
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS-RNDMFSKAKELFEETTRANSSGYTFLS 527
++D + M PN T N+++K Y RN++ +A ++ Y +
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL------------KAATAIYKDMC 1066
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
G + PD TY ++++ A + ++++ M G + + ++ L+
Sbjct: 1067 SRG--VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 170/463 (36%), Gaps = 74/463 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLML--------EDCNLY-------------------- 261
V+ +L G EA R+F ML + CN+Y
Sbjct: 620 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 679
Query: 262 -P------DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
P ++A+Y+ V + Q+G +KE L+ M K PD+
Sbjct: 680 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG---------------YTPDV 724
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ Y+ V+N + V+ + + +++ GLKP++ YG + ++ + K E F +
Sbjct: 725 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 784
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G + Y L+ F + G I A M R + Y + C G
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 844
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
+A + ++ + +P +TFT LI GH+ D + HM + C PN+ T
Sbjct: 845 MVEAGKLFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 903
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTF--------------------LSG--DGA 531
++ + A EL E + F L G + A
Sbjct: 904 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 963
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L D TY+++++A + + + + + K M G Q L+ G
Sbjct: 964 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 1023
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
E + +L G P+ F ++ Q +++N + A A+ M
Sbjct: 1024 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 1066
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/359 (18%), Positives = 138/359 (38%), Gaps = 19/359 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
VF++ + G+ + A+Y + + + Q G+ H M G ++Y +V +
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-PL 454
G++++ + M+++G+ + +Y + LC + +A ++ +R P
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM--IRQGILPD 793
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
+ +T LI G I F M P++ T A++ + + +A +LF
Sbjct: 794 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
E F G L+PD T++ ++ A + V+ M +GC +
Sbjct: 854 E---------MFCKG----LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 900
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ L+ + G + + G P+ + ++ N E+AV L+
Sbjct: 901 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960
Query: 634 AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA--LHAL 690
A + +T L ++ DK +++L + + +T + L LH +
Sbjct: 961 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 1019
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 16/192 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K+G +A I ML L P I ++ + G+L++ KL+ M
Sbjct: 972 YTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K + P+ +N+++ + K ++K + G+ P
Sbjct: 1031 LAKG---------------IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 1075
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ ++ F++M G ++ TY VL++ F + K EA M
Sbjct: 1076 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135
Query: 411 EQRGVVGTASVY 422
+ G+ ++
Sbjct: 1136 RREGLAADKEIF 1147
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 137/304 (45%), Gaps = 24/304 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT ++ I+G+ G + IF M E+ ++ ++ A+ ++ G+ G + + L+ R
Sbjct: 84 IYTIMIGIMGREGLLEKCSEIFEDMPEN-DVKWNVYAFTALINAYGRNGQYEASLHLLAR 142
Query: 290 MRQK---PS----KRIKNMHRK---NWDPVL-----------EPDLVVYNAVLNACVPSH 328
M+++ P+ + N K +W+ +L +PDL+ YN +L+AC
Sbjct: 143 MKKEQVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRG 202
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ VFK + +SG+ A TY ++ S + V E R+M G Y
Sbjct: 203 LVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYN 262
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ A+ + G ++ A + M++ G Y L N G ++ + +K L
Sbjct: 263 SLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDL 322
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
+ P T+ LI +GG+ + I++F M D +P+ T +A+L V R + +
Sbjct: 323 -STPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTRE 381
Query: 508 AKEL 511
A ++
Sbjct: 382 AAKI 385
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 100/535 (18%), Positives = 202/535 (37%), Gaps = 59/535 (11%)
Query: 139 FAKNVEWH---------PEKRWRSEAEAIRVLVDRLSERE-MTAKNWKFVRIMNQSGLMF 188
FA +WH ++W E I ++ + RE + K + M ++ + +
Sbjct: 56 FAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKW 115
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
L+ G G + ++ +L +K ++ + Y +L K G E L
Sbjct: 116 NVYAFTALINAYGRNGQYEASLHLLAR---MKKEQVEPNLITYNTVLNACSKGGLDWEGL 172
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS------------- 295
+ + PD+ Y+++ GL+++ + + M +
Sbjct: 173 LNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDT 232
Query: 296 -------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R++ + R+ D PD+ YN+++ A + G VFKQ+++ G P
Sbjct: 233 FAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPD 292
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + G ++ V F M TY L++ F E G E++
Sbjct: 293 VETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFH 352
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDA------MLVVEKIKSLRHSKPLEITFTGLI 462
+M GV + Y L G ++A ML E SL S L ++ +
Sbjct: 353 DMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMA 412
Query: 463 ISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ + D +S ++ + +P + +A+++ Y++ ++ +A G
Sbjct: 413 M------YKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEA-------------G 453
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEA-SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
T + + A + + +S++EA S E E+ + G ++D+ H LL
Sbjct: 454 STLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGV 513
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
G + F + E ++P + +L + +S ++ A L++ M A
Sbjct: 514 YCDMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQLLDEMIAA 568
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 173/400 (43%), Gaps = 41/400 (10%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ V D V +++K L + ++ +A + EA+ FN+M E N+ P++AA
Sbjct: 70 RQYQMVWDLVNAMRNKEILNVE-AFCIIMRKYARAQKVEEAVYTFNVM-EKYNMKPNVAA 127
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
++ GLL L K + +K + NM + PD Y+ ++
Sbjct: 128 FN---------GLLSALCK--SKNVRKAQEIFDNMKDQ-----FVPDSKTYSILIEGWGR 171
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ +++++ SG P TY + ++V+ ++G+ D E ++M + +
Sbjct: 172 APNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFI 231
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y VLV + E +I +AV+ ME+ GV+ + Y L C + ++ V++ +
Sbjct: 232 YSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDM- 290
Query: 447 SLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMF 505
L+ P T +II+S+ G G D+ IF+ M CEP++ + ++K++
Sbjct: 291 DLKGVNPNSRT-CNIIINSLIGRGETDEAFKIFRRMIKVCEPDVDSYTMIIKMFCGRKEL 349
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE-----ASATAHQWEYFEYVY 560
A ++++ + P +T+S ++ +AT E +
Sbjct: 350 DMALKIWKYMKKKQ-------------FVPSMHTFSVLINGLCQIGNATQACVLLEEMIE 396
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
KG+ SG + +H LL++ R L+ + L++
Sbjct: 397 KGIRPSGATFGRLRH--LLIKEGRKDVLKFLQEKMNLLVK 434
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 157/381 (41%), Gaps = 39/381 (10%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y ++ + G + E +KL+ M + P+ V YNA L
Sbjct: 75 PDVIIYSTLVNGFSEHGRVDEALKLLNTM------------------LCRPNTVCYNAAL 116
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W+ V + ++ + P+ AT+ + + Q+ + E +M K G
Sbjct: 117 KGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYM 176
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
++Y ++ F ++ + ++A+ +++M + T S L C LC RW DA+ +
Sbjct: 177 PDVVSYNTIISCFSDQARADDALKLLKSMLCKP--DTISFNAVLKC-LCKAKRWYDAVEL 233
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
V K+ + + E+TF LI S G + D I +F+ M K C P+I T ++++ +S
Sbjct: 234 VAKMLK-KDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFS 292
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ A +LF P + D ++Y++ L+ A +W+ +
Sbjct: 293 EQGLDEMAFDLFR----------------SMPCRADIFSYNATLKGLCMAARWDDAGELI 336
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M C ++ L+ + G + ++ + + G P + ++ Q
Sbjct: 337 ADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQ 396
Query: 621 SNYEKAVALINAMAYAPFHIT 641
+ A+ ++ M P I+
Sbjct: 397 GRLDDALKFLSTMPCEPDTIS 417
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 129/317 (40%), Gaps = 39/317 (12%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ +Y+++ + +KL++ M KP D + +NAVL
Sbjct: 177 PDVVSYNTIISCFSDQARADDALKLLKSMLCKP------------------DTISFNAVL 218
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ +W + ++ K + + T+ + ++ + Q+G+ E F M K
Sbjct: 219 KCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCM 278
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+TY L+ F E+G A R+M R + + + + LC RW DA +
Sbjct: 279 PDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKG---LCMAARWDDAGEL 335
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
+ + + P E+TF LI S G ++ I +++ M + P+I T NA++ YS
Sbjct: 336 IADMVT-EDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYS 394
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
A + FLS P +PD +Y+S+L+ A +W+ E +
Sbjct: 395 EQGRLDDALK--------------FLS--TMPCEPDTISYNSILKGLCRAERWKDAEKLV 438
Query: 561 KGMALSGCQLDQTKHAW 577
M C ++ +
Sbjct: 439 TEMLRKNCTPNEVTFKY 455
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 25/279 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD YN VL + QW+ + +++ ++ P+ T+ + Q+G D E
Sbjct: 5 PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVEL 64
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLC 430
+M K G + Y LV F E G+++EA+ + M R +V Y A LC
Sbjct: 65 LEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR----PNTVCYNAALKGLC 120
Query: 431 NNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
GRW++ L+ E ++ + P + TF+ LI S ++ + + + M+ +
Sbjct: 121 IAGRWEEVGELIAEMVR--KDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKY----- 173
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
M V S N + S F + RA+ + S KPD +++++L+
Sbjct: 174 ---GYMPDVVSYNTIIS----CFSDQARADDALKLLKS---MLCKPDTISFNAVLKCLCK 223
Query: 550 AHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
A +W + E V K M C++++ L+ + G+
Sbjct: 224 AKRWYDAVELVAK-MLKKDCRINEMTFNILIDSLCQNGQ 261
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 110/266 (41%), Gaps = 32/266 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLM 254
+LK L W A+ ++ + K+D + + + L+ L + G+ +A+ +F LM
Sbjct: 217 VLKCLCKAKRWYDAVELVAKML----KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELM 272
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PDI Y S+ + GL + L R P + D+
Sbjct: 273 PKY-RCMPDIVTYSSLINGFSEQGLDEMAFDLF---RSMPCR---------------ADI 313
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YNA L + +W + + P+ T+ + + + Q G + + + +
Sbjct: 314 FSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQ 373
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME-QRGVVGTASVYYELACCLCNNG 433
M K G TY L+ + E+G++++A+ + M + + S+ LC
Sbjct: 374 MPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEPDTISYNSILKG----LCRAE 429
Query: 434 RWQDA-MLVVEKIKSLRHSKPLEITF 458
RW+DA LV E ++ ++ P E+TF
Sbjct: 430 RWKDAEKLVTEMLR--KNCTPNEVTF 453
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 24/158 (15%)
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
P+ PD YTY+++L+ A QWE E + + M + C ++ A + + G LL
Sbjct: 2 PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNG---LL 58
Query: 592 EHAFDSLLEA----GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER---- 643
+ A + LLE G P + ++ ++ ++A+ L+N M P +
Sbjct: 59 DRAVE-LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALK 117
Query: 644 ------QWTELFESNEDRISRD------KLEKLLNALC 669
+W E+ E + + +D L+N+LC
Sbjct: 118 GLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLC 155
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 6/211 (2%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P +P + +YN +L +C+ + + V W++K + G+ P T+ L + + S D
Sbjct: 106 PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
E F +M + G T+ +LVR + + G ++ + + ME GV+ +Y +
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK----- 482
C GR D+ +VEK++ P +TF I + G + D IF M+
Sbjct: 226 SFCREGRNDDSEKMVEKMRE-EGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
PN T N MLK + + + AK LFE
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 169/433 (39%), Gaps = 60/433 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNL---YPDIAAYHSVAVTLGQVGLLKELVKL 286
+ ++ L K G+ +A RIF+ M D L P+ Y+ + +VGLL++ L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 287 IERMRQ------------------KPSKRIK--NMHRKNWDPVLEPDLVVYNAVLNACVP 326
E +R+ + K I+ + ++ D + P + YN +++
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ ++++G+ P A TYG + GK D ++M ++ A T
Sbjct: 374 LGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKI 445
+L+ + W+ G+I+EA +R M ++G G +V + LC +G A +E +
Sbjct: 434 CNILLHSLWKMGRISEAEELLRKMNEKG-YGLDTVTCNIIVDGLCGSGELDKA---IEIV 489
Query: 446 KSLR-HSKP----LEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYS 500
K +R H L ++ GL+ S+ ++++C P++ T + +L
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSL--------------IENNCLPDLITYSTLLNGLC 535
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ F++AK LF E G L+PD Y+ + + V
Sbjct: 536 KAGRFAEAKNLFAEMM-------------GEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
K M GC + L++ + + D + E G P+ + +
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 621 SNYEKAVALINAM 633
E A L++ M
Sbjct: 643 EKVEDATNLLDEM 655
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 167/431 (38%), Gaps = 62/431 (14%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
L+GL G + +A +VL + DK S + Y L+ L K G +A I LM
Sbjct: 333 LQGLVRHGKFIEAETVLKQ---MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 257 DCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKRIKN------------- 300
+ + PD Y + ++G+V K L++ + R P+ N
Sbjct: 390 N-GVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 301 ----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG------------ 344
+ RK + D V N +++ S + + K +R G
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Query: 345 -----------LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
P TY + + ++G++ F +M ++ Y + +
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHH 568
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
F ++GKI+ A +++ME++G + Y L L + + +++++K + P
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE-KGISP 627
Query: 454 LEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
T+ I +G ++D ++ + M+ + PN+ + +++ + + F A+E+F
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 513 EETTRAN-------SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
E S + L G LK E +LEA +E ++YK +
Sbjct: 688 ETAVSICGQKEGLYSLMFNELLAAGQLLKATE-----LLEA-VLDRGFELGTFLYKDLVE 741
Query: 566 SGCQLDQTKHA 576
S C+ D+ + A
Sbjct: 742 SLCKKDELEVA 752
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 205/493 (41%), Gaps = 64/493 (12%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
K WR E ++ L DR+ + + +FV +++ S + T ++K +G + +W+
Sbjct: 106 KDWR---ERVKFLTDRI----LGLRPDQFVADVLDDSKVQMTPTDFCFVVKWVGQE-NWQ 157
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ V +W+ L+ +R + T +LA+LGKA + A+ IF + + + + Y
Sbjct: 158 RALEVFEWL-NLRHWYSPNARMLAT-ILAVLGKANQEALAVEIF--IRAESTVDNTVQVY 213
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSK------------RIK------NMHRKNWDPV 309
+++ + G ++ +++ MR++ + R+K N+ + + V
Sbjct: 214 NAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEV 273
Query: 310 ----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
L PD++ YN +++AC + VF + +P TY + V + G
Sbjct: 274 RRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFS 333
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+ F+++ G A+TY L+ AF EG +++ M Q G + Y +
Sbjct: 334 GKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTI 393
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 484
G+ A+ + +K L P IT+T LI S + + ++ M +
Sbjct: 394 IHMYGKQGQHGLALQLYRDMK-LSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIG 452
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+P + T +A++ Y+R +A+E F+ R+ ++PD+ YS ML
Sbjct: 453 VKPTLRTYSALICGYARAGQRLEAEETFDCMRRSG-------------IRPDQLAYSVML 499
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK--------------CHL 590
+ + +Y+ M G D T + +L R K C +
Sbjct: 500 DVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGM 559
Query: 591 LEHAFDSLLEAGE 603
A S+L GE
Sbjct: 560 NPQAIASILVKGE 572
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/445 (17%), Positives = 170/445 (38%), Gaps = 43/445 (9%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S+ +Y ++ + K G P A + +L + + I+ +V T G++ L ++ L
Sbjct: 698 SKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESL 757
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLE------------------------PDLVVYNAVLN 322
+ +RQ R N+ RK W+ +++ P + N +L
Sbjct: 758 VGNLRQ----RCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQ 813
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
A + + + ++ V ++++ G + S ++ L ++ + + ++ M +G
Sbjct: 814 ALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFP 873
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
Y++++ + ++ + A V ME+ G S++ + ++ + +
Sbjct: 874 TMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIY 933
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR 501
++IK +P E T+ LI+ ++ S+ M+ EP + T +++ + +
Sbjct: 934 QRIKE-DGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGK 992
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+ A+ELFEE S K D Y M++ + E +
Sbjct: 993 QQLVVDAEELFEELLSKGS-------------KLDRSFYHIMMKIYRNSGNHSKAEKLLS 1039
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
M +G + L+V +G+ E +L E G L ++ ++ +
Sbjct: 1040 MMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNK 1099
Query: 622 NYEKAVALINAMAYAPFHITERQWT 646
+Y + + M R WT
Sbjct: 1100 DYSVGIQKLVEMKKEGLEPDHRIWT 1124
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 26/229 (11%)
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKDHCEPNIGTVN 493
WQ A+ V E + +LRH I++ + + + + IF + + + N
Sbjct: 156 WQRALEVFEWL-NLRHWYSPNARMLATILAVLGKANQEALAVEIFIRAESTVDNTVQVYN 214
Query: 494 AMLKVYSRNDMFSKAKELF----EETTRANSSGYTFL------SGDGAP----------- 532
AM+ VY+R F+K + + E + + L +G P
Sbjct: 215 AMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVR 274
Query: 533 ---LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
L+PD TY++++ A + E V+ M CQ D + ++ R G
Sbjct: 275 RSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSG 334
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
E F L G P + + +L + N +K + N M F
Sbjct: 335 KAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGF 383
>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 376
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI +D I +F+ M HC P
Sbjct: 140 CKEANLDRALSVLNGMIKS--GCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LDPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFD 294
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 55/303 (18%), Positives = 126/303 (41%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K+ ++ Y L+ K G ++L + M
Sbjct: 65 MMRGLFDNGKVDEVISIWEL---MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L + ++ M + K P++
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCK---------------PNVH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N + +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 166 VYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + K+ A+ + +G ++ L LC+ G+
Sbjct: 226 LDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKI 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
Q A+ + + + P ++ L+ G I + + I+ +++ EP+I + N
Sbjct: 286 QLALSLYFDMNRWK-CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNI 344
Query: 495 MLK 497
LK
Sbjct: 345 TLK 347
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/489 (19%), Positives = 196/489 (40%), Gaps = 40/489 (8%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+LL L + P ALR+ N L + P Y + LG VG L + L+ MR+
Sbjct: 43 QLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 293 KPSK-RIKNMHR-------------------KNWDPV--LEPDLVVYNAVLNACVPSHQW 330
+ + ++ +H P+ ++ D VVYN +LN V +
Sbjct: 103 EGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKM 162
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
K + V+ ++ G+KP T+ M+ + ++ + +M+ G A T+ L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
++ F EEG I A+ M + G T L C GR +DA+ +++ +
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ-EIADG 281
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 509
+P +IT+ + H+ + + M ++ +P++ T N ++ +N +AK
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+ + D L PD T+++++ A T ++ E + + + + G
Sbjct: 342 GILNQMV------------DRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
D L+ + G HL F+ + +G P + + ++ KA+ L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 630 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 689
+ M + + + + ++ ++ E++ + + + + IT + L +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL---IDG 505
Query: 690 LCRSEKERD 698
LC+ +K D
Sbjct: 506 LCKDKKIDD 514
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 141/382 (36%), Gaps = 64/382 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ L K G+ EA I N M+ D PDI ++++ L L+E + L
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMV-DRGCLPDITTFNTLIAALCTGNRLEEALDL-- 378
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RQ K + PD+ +N ++NA +F++++ SG P
Sbjct: 379 -ARQVTVKGVS------------PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY ++ + GK + + M +G +TY ++ ++ +I EA
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M+ +G+ A + L LC + + DA ++
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN------------------------- 520
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
Q + + +PN T N++L Y + KA ++ E T ++G+
Sbjct: 521 ----------QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT---ANGF----- 562
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ D TY +++ A + + V +GM + G + + +L R
Sbjct: 563 -----EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 589 HLLEHAFDSLLEAGEIPHPLFF 610
F + E GE P L +
Sbjct: 618 RDALSLFREMAEVGEPPDALTY 639
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 136/348 (39%), Gaps = 24/348 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
EPD + YN +N + V + + G P TY + + + ++G+ +
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M G T+ L+ A ++ EA+ R + +GV + L L
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C G A+ + E++K+ P E+T+ LI + G + + + + M+ C +
Sbjct: 402 CKVGDPHLALRLFEEMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTFLSG-------DGA----- 531
T N ++ + +A+E+F++ +R + T + G D A
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520
Query: 532 -----PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
L+P+ TY+S+L + + + M +G ++D + L+ +AG
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + + G P P + +L ++N A++L MA
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 33/260 (12%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLK------------DKRDL----KSRFVYTKL 234
G+ L LLK + G R ++ + GL D+ DL ++ + L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K + +A + N M+ + L P+ Y+S+ + G +K+ ++E M
Sbjct: 503 IDGLCKDKKIDDAFELINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
E D+V Y ++N + + + V + +R G++P+ Y
Sbjct: 562 ---------------FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVAAVRNMEQR 413
++ + + FR+MA+ GE ALTYK++ R G I EA + M +
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666
Query: 414 GVVGTASVYYELACCLCNNG 433
G + S + LA L N G
Sbjct: 667 GFIPEFSSFRMLAEGLLNLG 686
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 107/278 (38%), Gaps = 27/278 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH ALR+F M ++ PD Y+++ L +G L + + L++
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 289 RMRQKPSKR------------IKNMHRKNWDPVLEP--------DLVVYNAVLNACVPSH 328
M R K M + + V + + + +N +++
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ F + Q+ GL+P+ TY + + G + M +G + +TY
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ + G+ A+ +R M +G+ T Y + L +DA+ + ++ +
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630
Query: 449 RH---SKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
+ +I F GL GG I + M D
Sbjct: 631 GEPPDALTYKIVFRGL---CRGGGPIKEAFDFMLEMVD 665
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/489 (19%), Positives = 196/489 (40%), Gaps = 40/489 (8%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+LL L + P ALR+ N L + P Y + LG VG L + L+ MR+
Sbjct: 43 QLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 293 KPSK-RIKNMHR-------------------KNWDPV--LEPDLVVYNAVLNACVPSHQW 330
+ + ++ +H P+ ++ D VVYN +LN V +
Sbjct: 103 EGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKM 162
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
K + V+ ++ G+KP T+ M+ + ++ + +M+ G A T+ L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
++ F EEG I A+ M + G T L C GR +DA+ +++ +
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ-EIADG 281
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 509
+P +IT+ + H+ + + M ++ +P++ T N ++ +N +AK
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+ + D L PD T+++++ A T ++ E + + + + G
Sbjct: 342 GILNQMV------------DRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
D L+ + G HL F+ + +G P + + ++ KA+ L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 630 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 689
+ M + + + + ++ ++ E++ + + + + IT + L +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL---IDG 505
Query: 690 LCRSEKERD 698
LC+ +K D
Sbjct: 506 LCKDKKIDD 514
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 142/382 (37%), Gaps = 64/382 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ L K G+ EA I N M+ D PDI ++++ L L+E + L
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMV-DRGCLPDITTFNTLIAALCTGNRLEEALDL-- 378
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RQ K + PD+ +N ++NA +F++++ SG P
Sbjct: 379 -ARQVTVKGVS------------PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY ++ + GK + + M +G +TY ++ ++ +I EA
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M+ +G+ A + L LC + + DA GL
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAF--------------------GL------- 518
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
I Q + + +PN T N++L Y + KA ++ E T ++G+
Sbjct: 519 --------INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT---ANGF----- 562
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ D TY +++ A + + V +GM + G + + +L R
Sbjct: 563 -----EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 589 HLLEHAFDSLLEAGEIPHPLFF 610
F + E GE P L +
Sbjct: 618 RDALSLFREMAEVGEPPDALTY 639
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 136/348 (39%), Gaps = 24/348 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
EPD + YN +N + V + + G P TY + + + ++G+ +
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M G T+ L+ A ++ EA+ R + +GV + L L
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C G A+ + E++K+ P E+T+ LI + G + + + + M+ C +
Sbjct: 402 CKVGDPHLALRLFEEMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTFLSG-------DGA----- 531
T N ++ + +A+E+F++ +R + T + G D A
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLIN 520
Query: 532 -----PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
L+P+ TY+S+L + + + M +G ++D + L+ +AG
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + + G P P + +L ++N A++L MA
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 33/260 (12%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLK------------DKRDL----KSRFVYTKL 234
G+ L LLK + G R ++ + GL D+ DL ++ + L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K + +A + N M+ + L P+ Y+S+ + G +K+ ++E M
Sbjct: 503 IDGLCKDKKIDDAFGLINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
E D+V Y ++N + + + V + +R G++P+ Y
Sbjct: 562 ---------------FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVAAVRNMEQR 413
++ + + FR+MA+ GE ALTYK++ R G I EA + M +
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666
Query: 414 GVVGTASVYYELACCLCNNG 433
G + S + LA L N G
Sbjct: 667 GFIPEFSSFRMLAEGLLNLG 686
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 107/278 (38%), Gaps = 27/278 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH ALR+F M ++ PD Y+++ L +G L + + L++
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 289 RMRQKPSKR------------IKNMHRKNWDPVLEP--------DLVVYNAVLNACVPSH 328
M R K M + + V + + + +N +++
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ F + Q+ GL+P+ TY + + G + M +G + +TY
Sbjct: 511 KIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ + G+ A+ +R M +G+ T Y + L +DA+ + ++ +
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630
Query: 449 RH---SKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
+ +I F GL GG I + M D
Sbjct: 631 GEPPDALTYKIVFRGL---CRGGGPIKEAFDFMLEMVD 665
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 140/353 (39%), Gaps = 36/353 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G A VLD +K + L Y ++ G+ AL IF +L
Sbjct: 144 LISGFIKANQLENANRVLDR---MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D N P + Y + G + +KL++ M K LEPD +
Sbjct: 201 KD-NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG---------------LEPDTL 244
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNA++ F + + L G KP TY + + +L GK+ + +M
Sbjct: 245 TYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM 304
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +T+ +L+ +GK+ EAV +R+M+++G+ A Y L C GR
Sbjct: 305 ISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRL 364
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
A +E + S P + + ++ G D + +F+ + + C PN+ + N
Sbjct: 365 DLATEFLEYMIS-DGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNT 423
Query: 495 MLK-VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ ++S D + + + + + + PDE TY+S++
Sbjct: 424 LFSALWSSGDRYRALEMILKLLNQG--------------IDPDEITYNSLISC 462
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 121/307 (39%), Gaps = 35/307 (11%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD+ YNA+++ + ++Q + V +++ G P TY + + GK DL E
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F ++ K +TY +L+ A +G I+ A+ + M +G+ Y + +C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH-------IDDCISIFQHMKD 483
A ++ + S R KP IT+ L+ + + G I + ISI
Sbjct: 255 KEMMVDKAFELLRSLSS-RGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI------ 307
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
C+PN+ T + ++ R+ +A L LKPD Y Y +
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG-------------LKPDAYCYDPL 354
Query: 544 LEASATAHQW----EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
+ + E+ EY M GC D + ++ R GK F+ L
Sbjct: 355 IAGFCREGRLDLATEFLEY----MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLD 410
Query: 600 EAGEIPH 606
E G P+
Sbjct: 411 EVGCPPN 417
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 121/296 (40%), Gaps = 24/296 (8%)
Query: 223 RDLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
R L SR Y LL L G+ E ++ + M+ P++ + + TL +
Sbjct: 267 RSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMIS-IGCKPNVVTHSILIGTLCR 325
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G ++E V L+ M++K L+PD Y+ ++ +
Sbjct: 326 DGKVEEAVNLLRSMKEKG---------------LKPDAYCYDPLIAGFCREGRLDLATEF 370
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
+ + G P Y M + ++GK D E F K+ + G +Y L A W
Sbjct: 371 LEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWS 430
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G A+ + + +G+ Y L CLC +G +A+ ++ ++S R+ +P +
Sbjct: 431 SGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRY-RPNVV 489
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 511
++ +++ +D I + M + C+PN T +++ + + ++A EL
Sbjct: 490 SYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 114/274 (41%), Gaps = 16/274 (5%)
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++GKY+ F M G + L++ F+ I +A + +E+ G +
Sbjct: 81 RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFA 140
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y L + ++A V++++KS R P +T+ +I S G +D + IF+
Sbjct: 141 -YNALISGFIKANQLENANRVLDRMKS-RGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198
Query: 481 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
+ KD+CEP + T +++ + A +L +E S G L+PD T
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEML---SKG----------LEPDTLT 245
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
Y++++ + + + ++ GC+ D + LL GK E ++
Sbjct: 246 YNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMI 305
Query: 600 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G P+ + + ++ E+AV L+ +M
Sbjct: 306 SIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSM 339
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 89/230 (38%), Gaps = 19/230 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L G +A+++L +K+K + Y L+A + GR A M+
Sbjct: 319 LIGTLCRDGKVEEAVNLL---RSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D L PDI Y+++ L + G + +++ E++ + P++
Sbjct: 376 SDGCL-PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCP---------------PNVS 419
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN + +A S + +L G+ P TY + + + G D E M
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDM 479
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
++Y +++ + + N+A+ + M ++G + Y L
Sbjct: 480 QSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILL 529
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/489 (19%), Positives = 196/489 (40%), Gaps = 40/489 (8%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+LL L + P ALR+ N L + P Y + LG VG L + L+ MR+
Sbjct: 43 QLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 293 KPSK-RIKNMHR-------------------KNWDPV--LEPDLVVYNAVLNACVPSHQW 330
+ + ++ +H P+ ++ D VVYN +LN V +
Sbjct: 103 EGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKM 162
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
K + V+ ++ G+KP T+ M+ + ++ + +M+ G A T+ L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTL 222
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
++ F EEG I A+ M + G T L C GR +DA+ +++ +
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ-EIADG 281
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 509
+P +IT+ + H+ + + M ++ +P++ T N ++ +N +AK
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+ + D L PD T+++++ A T ++ E + + + + G
Sbjct: 342 GILNQMV------------DRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
D L+ + G HL F+ + +G P + + ++ KA+ L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 630 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 689
+ M + + + + ++ ++ E++ + + + + IT + L +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL---IDG 505
Query: 690 LCRSEKERD 698
LC+ +K D
Sbjct: 506 LCKDKKIDD 514
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 141/382 (36%), Gaps = 64/382 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ L K G+ EA I N M+ D PDI ++++ L L+E + L
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMV-DRGCLPDITTFNTLIAALCTGNRLEEALDL-- 378
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RQ K + PD+ +N ++NA +F++++ SG P
Sbjct: 379 -ARQVTVKGVS------------PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY ++ + GK + + M +G +TY ++ ++ +I EA
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M+ +G+ A + L LC + + DA ++
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN------------------------- 520
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
Q + + +PN T N++L Y + KA ++ E T ++G+
Sbjct: 521 ----------QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT---ANGF----- 562
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ D TY +++ A + + V +GM + G + + +L R
Sbjct: 563 -----EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 589 HLLEHAFDSLLEAGEIPHPLFF 610
F + E GE P L +
Sbjct: 618 RDALSLFREMAEVGEPPDALTY 639
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 136/348 (39%), Gaps = 24/348 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
EPD + YN +N + V + + G P TY + + + ++G+ +
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M G T+ L+ A ++ EA+ R + +GV + L L
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C G A+ + E++K+ P E+T+ LI + G + + + + M+ C +
Sbjct: 402 CKVGDPHLALRLFEEMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTFLSG-------DGA----- 531
T N ++ + +A+E+F++ +R + T + G D A
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520
Query: 532 -----PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
L+P+ TY+S+L + + + M +G ++D + L+ +AG
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + + G P P + +L ++N A++L MA
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 33/260 (12%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLK------------DKRDL----KSRFVYTKL 234
G+ L LLK + G R ++ + GL D+ DL ++ + L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K + +A + N M+ + L P+ Y+S+ + G +K+ ++E M
Sbjct: 503 IDGLCKDKKIDDAFELINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
E D+V Y ++N + + + V + +R G++P+ Y
Sbjct: 562 ---------------FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVAAVRNMEQR 413
++ + + FR+MA+ GE ALTYK++ R G I EA + M +
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666
Query: 414 GVVGTASVYYELACCLCNNG 433
G + S + LA L N G
Sbjct: 667 GFIPEFSSFRMLAEGLLNLG 686
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 107/278 (38%), Gaps = 27/278 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH ALR+F M ++ PD Y+++ L +G L + + L++
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 289 RMRQKPSKR------------IKNMHRKNWDPVLEP--------DLVVYNAVLNACVPSH 328
M R K M + + V + + + +N +++
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ F + Q+ GL+P+ TY + + G + M +G + +TY
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ + G+ A+ +R M +G+ T Y + L +DA+ + ++ +
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630
Query: 449 RH---SKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
+ +I F GL GG I + M D
Sbjct: 631 GEPPDALTYKIVFRGL---CRGGGPIKEAFDFMLEMVD 665
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 100/533 (18%), Positives = 208/533 (39%), Gaps = 45/533 (8%)
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI--LGK 240
+SG F +G+++ L+ LG++G + + V L D K+ + L + LG
Sbjct: 220 RSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCG--DQKNGVAWEVLHCVMRLGG 277
Query: 241 A-------------GRPHEALRIFNLM--LEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
A GR + R+ L+ +E + P + + + L + + E ++
Sbjct: 278 AVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQ 337
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ +R+R K NW V EPD+V++N +++ + + + ++++ +
Sbjct: 338 VFDRLRGKGG--------SNWVGV-EPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNI 388
Query: 346 -KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+P+ TY ++ ++G +D HE FR+M + G +T LV + G+++ AV
Sbjct: 389 NRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAV 448
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
M+ +G+ G A+ Y L C AM E++ S P + + LI
Sbjct: 449 EFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS-SGCSPDAVVYYSLISG 507
Query: 465 SMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G ++D + +K + N ++ + + + EL E
Sbjct: 508 LCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETG---- 563
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+KPD TY++++ + V + M G + + ++
Sbjct: 564 ---------VKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYC 614
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMAYAPFHITE 642
F + ++P +LI A+ ++N ++A++L+ M
Sbjct: 615 SKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNT 674
Query: 643 RQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
+ + + D+ K +L++ + IT+ L+ L A+ EK
Sbjct: 675 TTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727
>gi|255660994|gb|ACU25666.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 376
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 MSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KSG + T+ +LV F + G IN+++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C + A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANFDKAVSVLNGMIKS--GCKPNAHVYNTLINGLVAASKFEDAIIVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ + +MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKKEMFGEAYNLVKELLDKG-------------LNPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVERALQLWNQVTSKGFKPDVRMHNILIHGLCSVGKMQLALSLYFD 294
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/287 (18%), Positives = 114/287 (39%), Gaps = 19/287 (6%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
++ +LV + K+ + + Q G + ++ GL + ++ +A+SVL
Sbjct: 93 DSXTFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANFDKAVSVL 152
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ G+ + VY L+ L A + +A+ +F M + P I Y+++
Sbjct: 153 N---GMIKSGCKPNAHVYNTLINGLVAASKFEDAIIVFREM-GTMHCSPTIITYNTLING 208
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + + E L++ + K L P ++ Y+ ++ H+ +
Sbjct: 209 LCKKEMFGEAYNLVKELLDKG---------------LNPGVITYSMLMKGLCLDHKVERA 253
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
++ Q+ G KP + + + + GK L + M + A +++ L+
Sbjct: 254 LQLWNQVTSKGFKPDVRMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEG 313
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
F+++G I A+ + + G+ Y LC+ R DA+L
Sbjct: 314 FYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P+ VYN ++N V + +++ VF+++ P+ TY + + + + +
Sbjct: 161 KPNAHVYNTLINGLVAASKFEDAIIVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYN 220
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+++ G G +TY +L++ + K+ A+ + +G ++ L LC
Sbjct: 221 LVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVRMHNILIHGLC 280
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNI 489
+ G+ Q A+ + + + P ++ L+ G I + + I+ +++ EP+I
Sbjct: 281 SVGKMQLALSLYFDMNRWK-CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDI 339
Query: 490 GTVNAMLK 497
+ N LK
Sbjct: 340 ISYNITLK 347
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 179/431 (41%), Gaps = 46/431 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L L KG A D + +K + L +R Y L+ K G EA + LM
Sbjct: 249 ILDALCKKGRLGDAR---DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ NL PD+ Y+ + L G ++E KL + M +N+ L PD+V
Sbjct: 306 QN-NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM--------ENLK-------LLPDVV 349
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++N C+ + F + +++ + G+KP+A T+ + ++ + GK D KM
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+SG + +TY L+ + + G + EA + M ++ + + + LC +
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
++A ++ + R E+++ LI+ G++D + ++ MK+ P+ T N
Sbjct: 470 EEAYKLLSSARK-RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 495 ML----KVYSRNDMFSKAKELFEETTRANSSGY-TFLSG---DG--------------AP 532
++ + SK EL E + + Y T L G +G
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
KPD +T + +L E ++ G +D + L+ + G+ L+
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR---LD 645
Query: 593 HAFDSLLEAGE 603
AF+ L E E
Sbjct: 646 DAFNLLSEMEE 656
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 164/412 (39%), Gaps = 54/412 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL+ L+ G G ++A +V++ + L + Y L+ L
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL---MTQNNLLPDVWTYNMLINGLCN 325
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKR 297
GR EA ++ + M E+ L PD+ +Y+++ + + E KL+E M +K P+
Sbjct: 326 EGRIEEAFKLRDEM-ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 298 IKNMHRKNW------------------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
N+ K W + PD V YN ++N + F +
Sbjct: 385 THNIMVK-WYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + +K + T + + + K + ++ K G I ++Y L+ ++++G
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEIT 457
++ A+ M+++ ++ + Y + LC G+ + A + K+ L S P E T
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA---ISKLNELLESGLLPDETT 560
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 514
+ ++ G ++ M ++ +P++ T N +L+ M KA +LF
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWV 620
Query: 515 ------TTRANSSGYTFLSGDG--------------APLKPDEYTYSSMLEA 546
T ++ T L +G L PD YTY++++ A
Sbjct: 621 SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/495 (19%), Positives = 186/495 (37%), Gaps = 74/495 (14%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G+PH A +IF M + L P++ ++ LL LV+ PS
Sbjct: 147 QSGQPHHAFQIFKKM-KRLRLRPNLLTCNT---------LLNSLVRY-------PSSHSV 189
Query: 300 NMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ R+ ++ ++ P++ +N V+ +++K + K P TY
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTI 249
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + + G+ + M G TY +LV + + G + EA + M Q +
Sbjct: 250 LDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ Y L LCN GR ++A + +++++L+ P +++ LI ++ I +
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL-PDVVSYNTLINGCLEWSKISEAF 368
Query: 476 SIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
+ + M + +PN T N M+K Y + A T+ SG++
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI---TKMEESGFS---------- 415
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
PD TY++++ A M ++D +L R K LE A
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK---LEEA 472
Query: 595 FDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+ L A G + + +++ N ++A+ L W E+ E
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKL---------------WDEMKEK 517
Query: 652 NEDRISRDKLEKLLNALCNCNAASSEITVSN-------------LSRALHALCRSEKERD 698
E S ++ LC C I+ N + LH CR E D
Sbjct: 518 -EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR---EGD 573
Query: 699 LSSSAHFGSQAIDIS 713
+ + F ++ ++ S
Sbjct: 574 VEKAFQFHNKMVENS 588
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 16/208 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ K G AL++++ M E + P Y+ + L Q G ++ + + +
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEK-EIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L PD YN +L+ + F ++ ++ KP
Sbjct: 550 LESG---------------LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T + + + G + + F G+AI +TY L+ + +EG++++A + M
Sbjct: 595 TCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDA 438
E++ + Y + L ++GR ++A
Sbjct: 655 EEKELGPDHYTYNAIITALTDSGRIREA 682
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/316 (17%), Positives = 113/316 (35%), Gaps = 42/316 (13%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
K + ++ + ++ L + + +K + + G E L+ G G+ +
Sbjct: 447 KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDR 506
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+ + D +K+K + S Y ++ L + G+ +A+ N +LE L PD Y+
Sbjct: 507 ALKLWD---EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES-GLLPDETTYN 562
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L R+ ++ H K + +PD+ N +L
Sbjct: 563 TI---------------LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEG 607
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ +F G TY + + + G+ D +M + TY
Sbjct: 608 MLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYN 667
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV-----------------------YYEL 425
++ A + G+I EA + M ++G + + Y E
Sbjct: 668 AIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEW 727
Query: 426 ACCLCNNGRWQDAMLV 441
LC G+++DAM +
Sbjct: 728 IKELCTEGKYKDAMRI 743
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/310 (18%), Positives = 121/310 (39%), Gaps = 24/310 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ---SGKYDLV 368
P + + + A V S Q F +FK++++ L+P+ T + +++ S
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
E F K G T+ +++ + E K +AV + M + Y +
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
LC GR DA ++ +KS R P T+ L+ G + + ++ + M +++ P
Sbjct: 253 LCKKGRLGDARDLLMDMKS-RGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++ T N ++ +A +L +E + L PD +Y++++
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEM-------------ENLKLLPDVVSYNTLINGC 358
Query: 548 ATAHQWEYFEYVYK---GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+W +K M+ G + + H ++ + GK + + E+G
Sbjct: 359 L---EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415
Query: 605 PHPLFFTEML 614
P + + ++
Sbjct: 416 PDCVTYNTLI 425
>gi|255660974|gb|ACU25656.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 372
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 20 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 78
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 79 SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 138
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 139 CKEANLDRAVSVLNGMIKS--GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 196
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N MF +A L +E L P TYS +++
Sbjct: 197 TIITYNTLINGLCKNKMFGEAYNLVKELLDKG-------------LDPGVITYSMLMKGL 243
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 244 CLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 293
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 102/244 (41%), Gaps = 19/244 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K+ ++ Y L+ K G ++L + M
Sbjct: 64 MMRGLFDNGKVDEVISIWEL---MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE-MA 119
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L V ++ M + K P++
Sbjct: 120 EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCK---------------PNVH 164
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N V + +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 165 VYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKEL 224
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + ++ A+ + +G ++ L LC+ G+
Sbjct: 225 LDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 284
Query: 436 QDAM 439
Q A+
Sbjct: 285 QLAL 288
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/468 (20%), Positives = 191/468 (40%), Gaps = 78/468 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L G+ A+ + D + D+ Y L+ + G +A I+ +L
Sbjct: 190 LINALAKSGNLLDAVELFDEMSVRGVNPDV---MCYNILIDGFLRKGDFVKANEIWKRLL 246
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ ++YP + Y+ + L ++G L E +++ RM++ PDL
Sbjct: 247 TESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEK---------------SPDLF 291
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
++++++ + + VF+++ +SGL P TY + + ++GK + E + M
Sbjct: 292 TFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM 351
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+K+ ++Y +L++ + K+ +A+ + + +RG+ ++ Y L LC NG
Sbjct: 352 SKN-NCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYL 410
Query: 436 QDAMLVVEKIK------------SLRHS--------KPLEI--------------TFTGL 461
A+ ++E+ + S+ H + +E+ F L
Sbjct: 411 NKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSL 470
Query: 462 IISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA----KELFEETT 516
I + +++ IS+ + MK C P + + N ++ + + FS A KE+ EE
Sbjct: 471 INGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGL 530
Query: 517 RANSSGYTFLSGDGAP-------------------LKPDEYTYSSMLEASATAHQWEYFE 557
+ + Y+ L DG LKPD ++ ++ TA + +
Sbjct: 531 KPDMITYSLLI-DGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVAL 589
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
++ M C D H ++ +AG C +D +LEAG P
Sbjct: 590 EIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQP 637
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 106/236 (44%), Gaps = 14/236 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P + +N++LNA + S+QW+ F + +G+ P+ TY + +++ + +++
Sbjct: 112 PGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGL 171
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
M ++G L+Y L+ A + G + +AV M RGV Y L
Sbjct: 172 LTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLR 231
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
G + A + +++ + P T+ +I G +D+ + ++ M K+ P++
Sbjct: 232 KGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLF 291
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
T ++M+ S+ F+ A+++F+E + L PD TY++ML
Sbjct: 292 TFSSMIHGLSKAGNFNAAEKVFQEMIESG-------------LSPDVRTYNAMLSG 334
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 185/471 (39%), Gaps = 53/471 (11%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
K P +AL +F M++ P I +++S+ L IE + + ++
Sbjct: 89 AKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM------------LNAFIESNQWREAELF 136
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW---KGVF-WVFKQLRKSGLKPSAATYGL 354
+ + P+L YN ++ Q+ KG+ W+F+ +GL P +YG
Sbjct: 137 FTYFQT---AGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFE----NGLNPDILSYGT 189
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG---KINEAVAAVRNME 411
+ + +SG E F +M+ G + Y +L+ F +G K NE R +
Sbjct: 190 LINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWK--RLLT 247
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+ V + Y + LC G+ ++M + ++K S L TF+ +I G+
Sbjct: 248 ESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDL-FTFSSMIHGLSKAGNF 306
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ +FQ M + P++ T NAML R +K EL+ ++ N
Sbjct: 307 NAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIV------ 360
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+Y+ +++ + E ++ + G + D T + L+ + G
Sbjct: 361 --------SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNG---Y 409
Query: 591 LEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 647
L A L EA G ++ M+ + E+AV LI+ M + +
Sbjct: 410 LNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNS 469
Query: 648 LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
L + KLE+ ++ L + TV + + ++ LC++E+ D
Sbjct: 470 LING---YVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSD 517
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 79/408 (19%), Positives = 164/408 (40%), Gaps = 72/408 (17%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
WK R++ +S + + ++ GL G ++M + + + + DL F ++ +
Sbjct: 242 WK--RLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDL---FTFSSM 296
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L KAG + A ++F M+E L PD+ Y+++ L + G L + +L M +
Sbjct: 297 IHGLSKAGNFNAAEKVFQEMIES-GLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNN 355
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
I V YN ++ + + + + ++ L + GLK + TYGL
Sbjct: 356 CCNI----------------VSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGL 399
Query: 355 AMEVMLQSGKYD-----------------------LVH------------EFFRKMAKSG 379
+ + ++G + +VH E +M K+
Sbjct: 400 LINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNR 459
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ + + L+ + K+ EA++ +R M+ + T Y + LC R+ DA
Sbjct: 460 RKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAY 519
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKV 498
L ++++ KP IT++ LI G +D ++++ Q + +P++ N ++
Sbjct: 520 LSLKEMLE-EGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHG 578
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
A E+F + + N PD T+++++E
Sbjct: 579 LCTAQKVDVALEIFTQMRQVNCV-------------PDLVTHNTIMEG 613
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 112/252 (44%), Gaps = 26/252 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
++ GL KG QA+ ++ + K++R L S V+ L+ +A + EA+ + M
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMK--KNRRKLNSH-VFNSLINGYVRAFKLEEAISVLREMK 491
Query: 255 LEDCNLYPDIAAYHSVAVTLGQV----------------GLLKELVK---LIERM-RQKP 294
+DC P + +Y+++ L + GL +++ LI+ + R +
Sbjct: 492 SKDC--APTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEK 549
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
N+ + + L+PDL ++N +++ + + +F Q+R+ P T+
Sbjct: 550 VDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNT 609
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
ME + ++G + + ++ ++G ++Y + + ++++A+ + + RG
Sbjct: 610 IMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRG 669
Query: 415 VVGTASVYYELA 426
++ A + L
Sbjct: 670 ILPNAPTWNVLV 681
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 105/261 (40%), Gaps = 45/261 (17%)
Query: 472 DDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
D +++FQ+M D C P I + N+ML + ++ + +A ELF +T+
Sbjct: 95 DQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREA-ELF----------FTYFQTA 143
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
G + P+ TY+ +++ S Q+E + + M +G D + L+ +++G
Sbjct: 144 G--MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSG--- 198
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
+LL+A E+ F EM ++ + + + + F W L
Sbjct: 199 -------NLLDAVEL-----FDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLL 246
Query: 650 ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQA 709
+ S + ++N LC + + N + ++EK DL + +
Sbjct: 247 TESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMK------KNEKSPDLFTFS------ 294
Query: 710 IDISPLHGIHEAFDVKETENV 730
S +HG+ +A + E V
Sbjct: 295 ---SMIHGLSKAGNFNAAEKV 312
>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 376
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI +D I +F+ M HC P
Sbjct: 140 CKEANLDRALSVLNGMIKS--GCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LDPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/303 (18%), Positives = 126/303 (41%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K+ ++ Y L+ K G ++L + M
Sbjct: 65 MMRGLFDNGKVDEVISIWEL---MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L + ++ M + K P++
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCK---------------PNVH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N + +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 166 VYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + K+ A+ + +G ++ L LC+ G+
Sbjct: 226 LDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKM 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
Q A+ + + + P ++ L+ G I + + I+ +++ EP+I + N
Sbjct: 286 QLALSLYFDMNRWK-CAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNI 344
Query: 495 MLK 497
LK
Sbjct: 345 TLK 347
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 182/446 (40%), Gaps = 44/446 (9%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFV-- 230
+F R M + T + +L GL +G ++D V G+K + F+
Sbjct: 214 LRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEG 273
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y K L + G A I LM E + ++ Y + +G ++E +L E M
Sbjct: 274 YFKRLDLGGVA-------EILTLM-EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R+K +E D+ VY ++++ S K +F ++ GL PSA
Sbjct: 326 REKG---------------IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAH 370
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYG + + ++G+ + +M G + + + L+ + E G ++EA+ M
Sbjct: 371 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 430
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
E++G+ Y +A LC R +A L+ ++ R P ++FT LI G
Sbjct: 431 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVE--RGVSPNTMSFTTLIDIYCKEG 488
Query: 470 HIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ + +F+ M++ PNI T N ++ YS+ +A +L +E
Sbjct: 489 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL------------- 535
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ L PD YT +S++ + + ++ M G + + ++ S+ G+
Sbjct: 536 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 595
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEML 614
+D + E G P ++ ++
Sbjct: 596 EEAFKLYDEMKETGLTPDDTVYSSLV 621
>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 376
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 123/283 (43%), Gaps = 18/283 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G + S +++ + M + GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGNEGNR-SVSSFNIMMRGLFDKGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KS ++TY +LV F + G IN+++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVV-EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ + IKS KP + LI + +D I +F+ M C P
Sbjct: 140 CKEANLDKAVSVLNDMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVRCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A +L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYDLVKEMLEKG-------------LNPSVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
H+ E ++ + G + D H L+ GK L
Sbjct: 245 CLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQL 287
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 130/304 (42%), Gaps = 23/304 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+++GL DKG + +S+ + L K D ++ Y L+ K G +++L + M
Sbjct: 65 MMRGLFDKGKVDEVISI----WELMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLE-M 119
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E D AY ++ L + L + V ++ M + K P+
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCK---------------PNA 164
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
VYN ++N V + +++ VF+++ P+ TY + + ++ + ++ ++
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKE 224
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G +TY +L++ + K+ A+ + +G ++ L LC+ G+
Sbjct: 225 MLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGK 284
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVN 493
Q A+ + + + P +T L+ G I + + I+ +++ EP+I + N
Sbjct: 285 TQLALSLYJDMNRWK-CAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYN 343
Query: 494 AMLK 497
LK
Sbjct: 344 ITLK 347
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 139/327 (42%), Gaps = 52/327 (15%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKRIKNMHR 303
A IF M++ L PD A Y+ + ++G + +++ ERM R +PS R
Sbjct: 482 AFSIFEDMIKS-GLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNR------ 534
Query: 304 KNWDPVLE------------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ P++E P ++ YNA+++ + HQ + V +
Sbjct: 535 -TFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDK 593
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ +G+ P+ TY + M SG E+F K+ +SG + Y+ L+RA + G+
Sbjct: 594 MSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 653
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TF 458
+ A+A R M + + +Y L G +A +++++K P I TF
Sbjct: 654 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKE--DGIPPNIHTF 711
Query: 459 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
T I + G + ++ Q M D +PN+ T ++K +++ + +A + FEE
Sbjct: 712 TSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKS 771
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSML 544
A LKPDE Y ++
Sbjct: 772 AG-------------LKPDEAAYHCLV 785
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 163/397 (41%), Gaps = 48/397 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFN---LMLEDCN--LYPDIAAYHSVAVTLGQVGLLKELV 284
Y+ L+A GK A ++F L++ N +Y +I H + G + +ELV
Sbjct: 325 TYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQS---GNMDRAEELV 381
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+ +E D + P + VY+++++ + K VF++L++ G
Sbjct: 382 REMEE-----------------DGIDAP-IDVYHSMMHGYTVAQDEKKCLIVFERLKECG 423
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+PS +YG + + ++ GK ++M G TY +L+ F A
Sbjct: 424 FRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAF 483
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ +M + G+ ++Y L C G A+ + E++K R +P TF +I
Sbjct: 484 SIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERM-QPSNRTFRPIIEG 542
Query: 465 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G + + M + C P + T NA++ R +A + ++ + A
Sbjct: 543 FAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAG---- 598
Query: 524 TFLSGDGAPLKPDEYTYSSMLEA-SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+ P+E+TY+ ++ +A+ + FEY K + SG +LD + LL
Sbjct: 599 ---------IAPNEHTYTIIMRGYAASGDIGKAFEYFTK-IKESGLKLDVYIYETLLRAC 648
Query: 583 SRAGKCHLLEHAFDSLLEAG--EIPHPLFFTEMLIQA 617
++G+ ++ A E +IP F +LI
Sbjct: 649 CKSGR---MQSALAVTREMSFQKIPRNTFIYNILIDG 682
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/338 (17%), Positives = 143/338 (42%), Gaps = 15/338 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+EP+ V+ ++++A + +G ++++ GL+ + TY + + ++ +
Sbjct: 284 IEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESAD 343
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ F++ + + + Y ++ A + G ++ A VR ME+ G+ VY+ +
Sbjct: 344 KLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGY 403
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ ++V E++K +P I++ LI + G + +++ + M+ H + N
Sbjct: 404 TVAQDEKKCLIVFERLKECGF-RPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHN 462
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T + ++ + F+ A +FE+ ++ L+PD Y+ ++EA
Sbjct: 463 NKTYSMLINGFIHLHDFANAFSIFEDMIKSG-------------LQPDRAIYNLLVEAFC 509
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ +++ M Q ++ + AG D + +G P +
Sbjct: 510 KMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVM 569
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
+ ++ I + E+AV++++ M+ A E +T
Sbjct: 570 TYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYT 607
>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 376
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI +D I +F+ M HC P
Sbjct: 140 CKEANLDRALSVLNGMIKS--GCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCPP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LDPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/303 (18%), Positives = 126/303 (41%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K+ ++ Y L+ K G ++L + M
Sbjct: 65 MMRGLFDNGKVDEVISIWEL---MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L + ++ M + K P++
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCK---------------PNVH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N + +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 166 VYNTLINGLAGASKFEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + K+ A+ + +G ++ L LC+ G+
Sbjct: 226 LDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
Q A+ + + + P ++ L+ G I + + I+ +++ EP+I + N
Sbjct: 286 QLALSLYFDMNRWK-CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNI 344
Query: 495 MLK 497
LK
Sbjct: 345 TLK 347
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 151/361 (41%), Gaps = 37/361 (10%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+R Y ++A L KA A+ + +M+ P+ Y+S+ G
Sbjct: 39 DRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMV-----MPNCFTYNSIMHGYCSSG-- 91
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
S++ + RK +EPD+V YN++++ + + +F +
Sbjct: 92 -------------QSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM 138
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
K GLKP TYG + G +H+ M ++G + + +L+ A+ ++ K+
Sbjct: 139 VKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKV 198
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+E V M Q+G+ A Y + LC GR DAML E++ + P + +T
Sbjct: 199 DEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID-KGLTPNVVVYTS 257
Query: 461 LI--ISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI + + D + + IF+ + PNI N +L + ++K+LF+
Sbjct: 258 LIHALCTYDKWEKAEEL-IFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFD----- 311
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
L G + PD TYS++++ A + + + GM G + D ++ L
Sbjct: 312 ------LLGHIG--VNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363
Query: 579 L 579
+
Sbjct: 364 I 364
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 147/356 (41%), Gaps = 31/356 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L K G+ EA +IF+ M++ L PDI Y ++ G L E+ L+ M
Sbjct: 115 YNSLMDYLCKNGKCTEARKIFDSMVKR-GLKPDITTYGTLLHGYASKGALVEMHDLLALM 173
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q ++ D V+N ++ A + V VF ++R+ GL P+A
Sbjct: 174 VQNG---------------MQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAV 218
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y ++ + + G+ D F +M G + Y L+ A K +A + +
Sbjct: 219 NYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEI 278
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+G+ + + LC GR ++ + + + + P IT++ LI G
Sbjct: 279 LDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHI-GVNPDVITYSTLIDGYCLAGK 337
Query: 471 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+D + + M +P+ T + ++ Y + + A LF+E S+G
Sbjct: 338 MDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKE---MESNG------- 387
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+ PD TY+ +L + + +Y + SG QL+ + + +L++ ++
Sbjct: 388 ---VNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKT 440
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 73/407 (17%), Positives = 150/407 (36%), Gaps = 31/407 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+V YN +++ + + ++ + P A TY + + ++ D E
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
M TY ++ + G+ +A+ R M G+ Y L LC
Sbjct: 69 LTVMVMP----NCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
NG+ +A + + + R KP T+ L+ G + + + M ++ + +
Sbjct: 125 NGKCTEARKIFDSMVK-RGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183
Query: 491 TVNAMLKVYSRNDMFSKAKELF----EETTRANSSGY-TFLSG-------DGA------- 531
N ++ Y++ + + +F ++ N+ Y T + G D A
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243
Query: 532 ---PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
L P+ Y+S++ A T +WE E + + G + +L + G+
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
+ FD L G P + ++ ++ + + A+ L+ M ++ L
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363
Query: 649 FESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
+ +I+R + L N + +I N+ LH L R+ +
Sbjct: 364 I-NGYCKINRMEDALALFKEMESNGVNPDIITYNI--ILHGLFRTRR 407
>gi|255660972|gb|ACU25655.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 376
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDRAVSVLNGMIKS--GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNKMFGEAYNLVKELLDKG-------------LDPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 102/244 (41%), Gaps = 19/244 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K+ ++ Y L+ K G ++L + M
Sbjct: 65 MMRGLFDNGKVDEVISIWEL---MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L V ++ M + K P++
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCK---------------PNVH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N V + +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + ++ A+ + +G ++ L LC+ G+
Sbjct: 226 LDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
Query: 436 QDAM 439
Q A+
Sbjct: 286 QLAL 289
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 182/426 (42%), Gaps = 45/426 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D L + ++F M +G+ E L++GL G + + ++D +
Sbjct: 190 IVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMI-- 247
Query: 220 KDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLG 275
+R L S +V+T L+ L K G EA +F+ M+ P+I ++ G
Sbjct: 248 --RRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNR-GYEPNIVTCTALMGGYCLKG 304
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV-----------------LEPDLVVYN 318
V + +EL I K N+ + V + P++V YN
Sbjct: 305 NVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYN 364
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
++++ + + G + + K + +SGL P T + ++ + +S + D F ++ +S
Sbjct: 365 SLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVES 424
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G +Y +L+ ++ EA+ +R+M + +V Y L LC +GR +A
Sbjct: 425 GLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNA 484
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
++ ++ ++ P IT++ L+ + H+D+ + +F M K EP++ M+
Sbjct: 485 WRLLNEMH-VKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMID 543
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA----SATAHQW 553
Y +++ +A LF E N L PD TY+ + A + +++W
Sbjct: 544 GYCKSERIDEAINLFREMHMKN-------------LVPDIVTYTILFNAVFKSGSNSYEW 590
Query: 554 EYFEYV 559
++ +
Sbjct: 591 KFVNVI 596
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 23/294 (7%)
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+K + Y + ++ + ++G D EF+ +M +G TY L+R GK E
Sbjct: 181 VKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGF 240
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
V M +RG+ + V+ L LC NG +A + +++ + R +P +T T L+
Sbjct: 241 GLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVN-RGYEPNIVTCTALMGG 299
Query: 465 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G++D +F + + + ++ T N + Y + A +F+E R
Sbjct: 300 YCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREG---- 355
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQ----WEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ P+ TY+S+++ A + WE + K M SG D LL
Sbjct: 356 ---------VVPNIVTYNSLIDCLCKAGEVSGAWE----IVKTMHRSGLTPDIVTCCILL 402
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ + F+ L+E+G P +T ++ +A+ L+ M
Sbjct: 403 DGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDM 456
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/290 (17%), Positives = 113/290 (38%), Gaps = 23/290 (7%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F +F ++ K G ++ + +G EF ++ +G ++ ++Y +L+
Sbjct: 92 FSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILING 151
Query: 394 FWEEGKINEAVAAVRNMEQRG--------VVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
E G++NEAV +R +E+ V G +Y + CLC NG + ++
Sbjct: 152 LCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEM 211
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
P E T+ LI G + + M + + ++ ++ +N M
Sbjct: 212 MG-NGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 270
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
+A+E+F+E + GY +P+ T ++++ + ++ +
Sbjct: 271 LVEAREMFDEMV---NRGY----------EPNIVTCTALMGGYCLKGNVDMARELFDAIG 317
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
G + D + + + G+ FD + G +P+ + + ++
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLI 367
>gi|255660984|gb|ACU25661.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 376
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + + K D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNDKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KSG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDRAVSVLNGMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LNPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/341 (18%), Positives = 139/341 (40%), Gaps = 32/341 (9%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G A R++ ++E + PD Y+++ +V +K+ +L E M + ++ +
Sbjct: 2 ESGDIDGAERVYKEIVES-KVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ +N ++ + + V +++ ++KSG + TYG+ +
Sbjct: 61 S----------------FNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGF 104
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++G D + G + A Y ++ +E ++ AV+ + M + G A
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNA 164
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
VY L L +++DA+ V ++ ++ H P IT+ LI + ++ +
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTM-HCSPTIITYNTLINGLCKNEMFGEAYNLVK 223
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
+ D P + T + ++K + KA +L+ + T S G+ KPD
Sbjct: 224 ELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVT---SKGF----------KPDVQ 270
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++ ++ + + + +Y M C + H L+
Sbjct: 271 MHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLM 311
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 112/281 (39%), Gaps = 19/281 (6%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LV + K+ + + Q G + ++ GL + + +A+SVL+ G+
Sbjct: 99 ILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLN---GM 155
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ VY L+ L A + +A+R+F M + P I Y+++ L + +
Sbjct: 156 IKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREM-GTMHCSPTIITYNTLINGLCKNEM 214
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E L++ + K L P ++ Y+ ++ H+ + ++ Q
Sbjct: 215 FGEAYNLVKELLDKG---------------LNPGVITYSMLMKGLCLDHKVEKALQLWNQ 259
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ G KP + + + + GK L + M + A +++ L+ F+++G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
I A+ + + G+ Y LC+ R DA+L
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/491 (18%), Positives = 202/491 (41%), Gaps = 43/491 (8%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+LLA L + P ALR+ N L + P A Y + LG G + L+ MR+
Sbjct: 58 RLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRR 117
Query: 293 KPSKRIKNMHRKNW--------------DPVL----------EPDLVVYNAVLNACVPSH 328
+ +++ + +++ D VL + D VV+N +LN V
Sbjct: 118 E-GHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGS 176
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ K + V+ ++ G++P T ++ + ++ + +M+ G A T+
Sbjct: 177 KLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFT 236
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L++ F EEG I A+ M + G T L C GR +DA+ +++ +
Sbjct: 237 TLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ-EIA 295
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
+P ++T+ + GH+ + + M ++ +P++ T N ++ S+N +
Sbjct: 296 DGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDE 355
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
AK + + D L PD T+++++ A ++ ++ E + + + + G
Sbjct: 356 AKGIVNQMV------------DRGCL-PDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
D L+ + G HL F+ + +G P + + ++ A+
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNAL 462
Query: 628 ALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 687
L+N M + + + ++ ++ ++ E++ + + + S +T + L +
Sbjct: 463 DLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTL---I 519
Query: 688 HALCRSEKERD 698
LC++++ D
Sbjct: 520 DGLCKAKRIDD 530
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 17/259 (6%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH +R+F M + PD Y+ + L +G L + L+
Sbjct: 408 YTFNILINALCKVGDPHLGIRLFEEM-KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLN 466
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M R V YN +++A + + VF Q+ G+ S
Sbjct: 467 EMESNGCPR---------------STVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A T+ ++ + ++ + D E +M K G +TY ++ + ++G I +A +
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILE 571
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M G Y L LC GR Q A+ ++ ++ ++ +P + +I S
Sbjct: 572 TMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR-IKGIRPTPKAYNPVIQSLFRR 630
Query: 469 GHIDDCISIFQHMKDHCEP 487
++ D +++F+ M + EP
Sbjct: 631 NNLRDALNLFREMTEVGEP 649
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/407 (19%), Positives = 150/407 (36%), Gaps = 64/407 (15%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ Y + L + G AL++ +LML++ + PD+ Y++V L + G L E ++
Sbjct: 302 QVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH-DPDVFTYNTVINCLSKNGELDEAKGIV 360
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+M D PD +N ++ A ++ + + ++L GL P
Sbjct: 361 NQM---------------VDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSP 405
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
T+ + + + + G L F +M SG +TY +L+ GK+ A+ +
Sbjct: 406 DVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLL 465
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
ME G + Y + LC R ++A V +++ + S+ +TF LI
Sbjct: 466 NEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS-AVTFNTLIDGLCK 524
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
IDD A EL E+ +
Sbjct: 525 AKRIDD----------------------------------ATELIEQMVKEG-------- 542
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
L+P+ TY+S+L + + + M +G ++D + L+ +AG+
Sbjct: 543 -----LQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 597
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + G P P + ++ ++N A+ L M
Sbjct: 598 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMT 644
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 23/227 (10%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+S + L+ L KA R +A + M+++ L P+ Y+S+ + G +K+
Sbjct: 510 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKE-GLQPNNITYNSILTHYCKQGNIKKAAD 568
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++E M E D+V Y ++N + + + + + +R G+
Sbjct: 569 ILETMTANG---------------FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 613
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAV 404
+P+ Y ++ + + FR+M + GE ALTYK++ R+ G I EA
Sbjct: 614 RPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAF 673
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-----LVVEKIK 446
+ M +G + S + LA L N G D + L++EK K
Sbjct: 674 DFLVEMVNKGFMPEFSSFRMLAEGLLNLG-MDDYLISAIELIIEKAK 719
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/440 (20%), Positives = 177/440 (40%), Gaps = 44/440 (10%)
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
D S+R L + + ++ + KLL+ + K H+A+ + +E L
Sbjct: 95 DASSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLS 154
Query: 262 PDIAAYHSVAVTLGQV-------GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
PD H + Q+ +L +++KL L+ +
Sbjct: 155 PDTYTLHMLINCFFQLQRVDLGFSVLAKIIKL----------------------GLQLTI 192
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V +N ++N ++ +F + G +P TY + + + G+ FRK
Sbjct: 193 VTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M ++G +TY ++ + ++ ++NEA+ M+ +G+ Y L LCN R
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
W++A ++ ++ SL + P +TF+ LI G++ + + + M + EPN+ T +
Sbjct: 313 WREASAMLNEMMSL-NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYS 371
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+++ YS +A++LF+ KPD ++Y+ ++ A +
Sbjct: 372 SLMNGYSLQAEVVEARKLFDVMITKGC-------------KPDVFSYNILINGYCKAKRI 418
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
+ ++ M G D + L+ + G+ F ++L G +P ++ +
Sbjct: 419 GEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSIL 478
Query: 614 LIQAIVQSNYEKAVALINAM 633
L Q KA L AM
Sbjct: 479 LDGFCKQGYLAKAFRLFRAM 498
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 142/320 (44%), Gaps = 21/320 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + WR+A ++L+ + L ++ + ++ L+ I K G EA + M
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVT---FSLLINIFCKEGNVFEARGVLKTMT 359
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P++ Y S+ + E KL + M K K PD+
Sbjct: 360 E-MGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCK---------------PDVF 403
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++N + + +F ++ GL P +Y ++ + Q G+ H+ F+ M
Sbjct: 404 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 463
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G TY +L+ F ++G + +A R M+ + +Y L +C +
Sbjct: 464 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 523
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
++A + ++ ++ +P +T +I G +D+ + F++M +D C PN + N
Sbjct: 524 KEARKLFSEL-FVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582
Query: 495 MLKVYSRNDMFSKAKELFEE 514
+++ + ++ S+A +L E
Sbjct: 583 IIRGFLQHKDESRAVQLIGE 602
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ KA R EA ++FN M+ L PDI +Y+++ L Q+G L+E L +
Sbjct: 403 FSYNILINGYCKAKRIGEAKQLFNEMIHQ-GLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461
Query: 289 RM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M +Q + + R L+P++V+YN +++A S
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 521
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
K +F +L GL+P+ Y + + + G D E FR M + G +Y
Sbjct: 522 NLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYN 581
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
V++R F + + AV + M ++G V
Sbjct: 582 VIIRGFLQHKDESRAVQLIGEMREKGFVA 610
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 167/384 (43%), Gaps = 34/384 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKG GS + A V+ + K D ++ Y+ L+ + AGR E+ RI +
Sbjct: 317 LLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQT---YSLLIDVYAHAGR-WESARIVLKEM 372
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E N+ P+ + + G ++ ++++ M+ ++PD
Sbjct: 373 EASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSG---------------VQPDRH 417
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +++ + F+++ G+ P T+ ++ +SG++D+ E F +M
Sbjct: 418 FYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEM 477
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G + TY +++ + E+ + + A + M+ +G+ + Y L +GR+
Sbjct: 478 QQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRF 537
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
DA+ +E +KS KP + LI + G + ++ F+ M + P++ +N+
Sbjct: 538 SDAIECLEVLKSTGF-KPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNS 596
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + + ++A + + N ++PD TY+++++A +++
Sbjct: 597 LINAFGEDRRDAEAFAVLQYMKENN-------------IEPDVVTYTTLMKALIRVEKFQ 643
Query: 555 YFEYVYKGMALSGCQLDQTKHAWL 578
VY+ M SGC D+ A L
Sbjct: 644 KVPAVYEEMVASGCTPDRKARAML 667
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 136/348 (39%), Gaps = 60/348 (17%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M S + ++L DKG W+++ VL +D+KS
Sbjct: 359 AGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVL---------KDMKS 409
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
V PD Y+ + T G+ L +
Sbjct: 410 SGV------------------------------QPDRHFYNVMIDTFGKYNCLDHAMATF 439
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
ERM + + PD+V +N +++ S + +F ++++ G P
Sbjct: 440 ERMLSEG---------------IPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSP 484
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + + M + +++ V F KM G ++TY LV + + G+ ++A+ +
Sbjct: 485 CITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECL 544
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
++ G T+++Y L G + A+ ++ + P + LI + +
Sbjct: 545 EVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAF-RLMTTEGLTPSLLALNSLINAFGE 603
Query: 468 GGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+ ++ Q+MK ++ EP++ T ++K R + F K ++EE
Sbjct: 604 DRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEE 651
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 136/355 (38%), Gaps = 66/355 (18%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
++ KAG P A+R F M + L P + +V + LG G E L E +R+
Sbjct: 247 IIVGFSKAGDPTRAMR-FLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIREN 305
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
LEP YNA+L V + K +V ++ K+G+KP TY
Sbjct: 306 G---------------LEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYS 350
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
L ++V +G+ WE +I ++ ME
Sbjct: 351 LLIDVYAHAGR------------------------------WESARI-----VLKEMEAS 375
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
V + V+ + + G WQ + V++ +KS +P + +I + +D
Sbjct: 376 NVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKS-SGVQPDRHFYNVMIDTFGKYNCLDH 434
Query: 474 CISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
++ F+ M + P+I T N ++ + ++ A+ELF E + GY+
Sbjct: 435 AMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQ---RGYS-------- 483
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
P TY+ M+ + +WE M G Q + + L+ ++G+
Sbjct: 484 --PCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGR 536
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 127/303 (41%), Gaps = 25/303 (8%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD-- 366
VL P + YNA++ AC + + + ++R+ G +P Y ++ + +S K D
Sbjct: 166 VLTP--LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSP 223
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
++ + + ++ I ++ F + G A+ + + G+ S +
Sbjct: 224 ILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVI 283
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 485
L N+GR +A + E+I+ +P + L+ + G + D + M K
Sbjct: 284 LALGNSGRTHEAEALFEEIRE-NGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGV 342
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+P+ T + ++ VY+ + A+ + +E +N ++P+ Y +S +L
Sbjct: 343 KPDEQTYSLLIDVYAHAGRWESARIVLKEMEASN-------------VQPNSYVFSRILA 389
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAG 602
+W+ V K M SG Q D+ + ++ GK + L+HA F+ +L G
Sbjct: 390 NYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMI---DTFGKYNCLDHAMATFERMLSEG 446
Query: 603 EIP 605
P
Sbjct: 447 IPP 449
>gi|15232243|ref|NP_191564.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181813|sp|Q9M1D8.1|PP288_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g60050
gi|7076758|emb|CAB75920.1| putative protein [Arabidopsis thaliana]
gi|332646485|gb|AEE80006.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 473
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 149/378 (39%), Gaps = 68/378 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA-AYHSVAVTLGQVGLLKELVKLIER 289
Y L+ I + G R+ + M++D +P A ++ + + G+ GL K+ V ++
Sbjct: 152 YHLLMKIFAECGEYKAMWRLVDEMVQDG--FPTTARTFNLLICSCGEAGLAKQAV--VQF 207
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K N+ P YNA+LN+ + Q+K + WV+KQ+ + G P
Sbjct: 208 MKSKTF---------NYRPFKHS----YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDV 254
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + GK D F +MA+ G + + TY +L+ GK N+ +AA+
Sbjct: 255 LTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL---GKGNKPLAALTT 311
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ VG P + +T LI G
Sbjct: 312 LNHMKEVGI---------------------------------DPSVLHYTTLIDGLSRAG 338
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+++ C M K C P++ M+ Y + KAKE+F E T
Sbjct: 339 NLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ-------- 390
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
P+ +TY+SM+ A ++ ++ K M GC + ++ L+ +AGK
Sbjct: 391 -----LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
Query: 589 HLLEHAFDSLLEAGEIPH 606
+++ G H
Sbjct: 446 SEARKVIREMVKKGHYVH 463
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 132/329 (40%), Gaps = 39/329 (11%)
Query: 145 WHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
W E+ +R + +L+ +E W+ V M Q G T L+ G+
Sbjct: 138 WSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEA 197
Query: 204 GSWRQAMSVLDWVYGLKDK----RDLKSRF--VYTKLLAILGKAGRPHEALR-IFNLMLE 256
G +QA+ V +K K R K + + LL + + ++ + ++ MLE
Sbjct: 198 GLAKQAV-----VQFMKSKTFNYRPFKHSYNAILNSLLGV-----KQYKLIEWVYKQMLE 247
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKN--MH--RKNWDPV 309
D PD+ Y+ + T ++G + +L + M + P N +H K P+
Sbjct: 248 D-GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPL 306
Query: 310 -------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
++P ++ Y +++ + + + ++ K+G +P Y + +
Sbjct: 307 AALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMI 366
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ SG+ D E FR+M G+ TY ++R G+ EA ++ ME RG
Sbjct: 367 TGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCN 426
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKI 445
VY L L G+ +A V+ ++
Sbjct: 427 PNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 71/174 (40%), Gaps = 21/174 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y LL ILGK +P AL N M ++ + P + Y ++ L + G L+ ++
Sbjct: 290 YTYNILLHILGKGNKPLAALTTLNHM-KEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLD 348
Query: 289 RMRQKPSK--------------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M + + + K M R+ P++ YN+++ +
Sbjct: 349 EMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAG 408
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+++ W+ K++ G P+ Y + + ++GK + R+M K G +
Sbjct: 409 EFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYV 462
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 121/318 (38%), Gaps = 38/318 (11%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
LR A LA L SG+ E FR S Y +L++ F E G+
Sbjct: 117 LRNLSYDNKARCAKLAYRFFLWSGE----QECFRHTVNS--------YHLLMKIFAECGE 164
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
V M Q G TA + L C G + A++ K K+ + +P + ++
Sbjct: 165 YKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNY-RPFKHSYN 223
Query: 460 GLIISSMDGGHIDDCIS-IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
I++S+ G I +++ M +D P++ T N +L R + LF+E R
Sbjct: 224 A-ILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMAR 282
Query: 518 ANSS--GYTF------LSGDGAPLK--------------PDEYTYSSMLEASATAHQWEY 555
S YT+ L PL P Y+++++ + A E
Sbjct: 283 DGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEA 342
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
+Y M +GC+ D + ++ +G+ + F + G++P+ + M+
Sbjct: 343 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 402
Query: 616 QAIVQSNYEKAVALINAM 633
+ + +A L+ M
Sbjct: 403 GLCMAGEFREACWLLKEM 420
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 154/362 (42%), Gaps = 67/362 (18%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT ++++LG+ G + IF M + + +Y ++ + G+ G + ++L+ER
Sbjct: 145 IYTIMISLLGREGLLEKCSDIFEEMGAH-GVSRSVFSYTALINSYGRNGKYEVSLELLER 203
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPS 348
M+++ + P ++ YN V+N+C W+G+ +F ++R G++P
Sbjct: 204 MKKER---------------VSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPD 248
Query: 349 AATY----------GLAME------VMLQSG-------------------KYDLVHEFFR 373
TY GL E M + G + D V E +
Sbjct: 249 IVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLK 308
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+MA +G +Y VL+ A+ G I +A R M++ G V A Y L +G
Sbjct: 309 EMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHG 368
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 492
R+ + + ++K + +++P T+ LI +GG+ + +++F M +++ EPN+ T
Sbjct: 369 RYDEVRELFLEMK-VSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETY 427
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ + + AK++ + + P Y+ ++EA A
Sbjct: 428 EGLIFACGKGGLHDDAKKILLHMSEKG-------------MIPSSKAYTGVIEAYGQAAM 474
Query: 553 WE 554
+E
Sbjct: 475 YE 476
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 147/356 (41%), Gaps = 40/356 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ LL + GK GR E +F L ++ N PD A Y+++ G+ G KE+V L
Sbjct: 356 TYSILLGLYGKHGRYDEVRELF-LEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHD 414
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M ++ +EP++ Y ++ AC + + + G+ PS+
Sbjct: 415 MAEEN---------------VEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSS 459
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E Q+ Y+ M + G TY L+ F G E A +
Sbjct: 460 KAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLK 519
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAM---LVVEKIKSLRHSKPLEITFTGLIISSM 466
M GV + + G++++A+ + +EK + + + LE + I+
Sbjct: 520 MGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIA-- 577
Query: 467 DGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGY 523
G +D+ + FQ +K PN+ ML VY+++D +++A EL +E T RA++
Sbjct: 578 --GLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEMLTNRASNIHQ 635
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
G +K D S+ W+ EYV+ + GC L + LL
Sbjct: 636 VI----GQMIKGDFDDDSN----------WQMVEYVFDKLNSEGCGLGMRFYNTLL 677
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 117/284 (41%), Gaps = 18/284 (6%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL G EA +F M E + PDI Y + T G++ L ++ +L++
Sbjct: 251 TYNTLLCACSNRGLGDEAEMVFRTMNEG-GVVPDITTYTYLVDTFGKLNRLDKVSELLKE 309
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + P++ YN +L A + VF+ ++++G P+A
Sbjct: 310 MASTGNV---------------PEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNA 354
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + + G+YD V E F +M S A TY L+ F E G E V +
Sbjct: 355 ETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHD 414
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + V Y L G DA ++ + S + P +TG+I +
Sbjct: 415 MAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHM-SEKGMIPSSKAYTGVIEAYGQAA 473
Query: 470 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
++ + M + +P I T N ++ +++R ++ + + +
Sbjct: 474 MYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAIL 517
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 24/228 (10%)
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
G WQ ++ + + ++ KP E +T +I G ++ C IF+ M H ++ +
Sbjct: 121 GDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFS 180
Query: 492 VNAMLKVYSRNDMFSKAKELFEE-------------TTRANSSGYTFLSGDG-------- 530
A++ Y RN + + EL E T NS L +G
Sbjct: 181 YTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEM 240
Query: 531 --APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
++PD TY+++L A + + E V++ M G D T + +L+ + +
Sbjct: 241 RHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRL 300
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
+ + G +P + +L N E A + M A
Sbjct: 301 DKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEA 348
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 198/496 (39%), Gaps = 83/496 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G +A+ + D G + + Y L+ KA + EA RI M+
Sbjct: 126 LLHGFCKVGKLDEALKIFD---GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182
Query: 256 EDCNLYPDIAAYHSVAVTL---GQV------------------------GLLKELVKLIE 288
+ +L PD+ Y+S+ L G+V GL +EL +L E
Sbjct: 183 SE-SLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRL-E 240
Query: 289 RMRQKPSKRIKNMHR-----------------------KNWDPVL----EPDLVVYNAVL 321
RQ K + N + K + VL EP++ YN ++
Sbjct: 241 SARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILI 300
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + + F +F L K GL+P A TY + ++ + ++G+ + + M + G
Sbjct: 301 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 360
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+++ ++ +E +++EA + ME +G A + L C C G+W+ AM
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 420
Query: 442 VEKIKSLRHSKPLEITFTGLI---ISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLK 497
+++ R KP +T+ L+ + G I + I++F M + P++ T +A++
Sbjct: 421 FKEMLK-RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 479
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
+ A+ L + P+ YTY+S++ + +
Sbjct: 480 GLGKAGKLDDARRLLGAM-------------EAKGCIPNVYTYNSLISGLCGLDKVDEAL 526
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEML 614
++ M GC D + ++ S K +++ A FD LEAG +P + ++
Sbjct: 527 ELFVAMVEKGCVPDTITYGTII---SALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLI 583
Query: 615 IQAIVQSNYEKAVALI 630
+ ++A+ L+
Sbjct: 584 DGLCAVARVDEALKLL 599
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 138/347 (39%), Gaps = 30/347 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ + YNA+L+ + +++++ K+G P TY + + GK D +
Sbjct: 83 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKI 142
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F K G +TY L+ F + K++EA ++ M +V Y L LC
Sbjct: 143 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCK 202
Query: 432 NGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIIS-SMDGGHIDDCISIFQHMK-DHCEPN 488
NGR +A ML+V+K S P IT++ LI + ++ + + M + C+P+
Sbjct: 203 NGRVDEARMLIVDKGFS-----PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPD 257
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRAN---------------------SSGYTFLS 527
I + NA++ +R S+A +LF R + + S
Sbjct: 258 IVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 317
Query: 528 G-DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
G L+PD TY+ ++ A + E + K M GC D H ++ +
Sbjct: 318 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 377
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ E + G P+ + F ++ ++KA+ M
Sbjct: 378 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 105/572 (18%), Positives = 213/572 (37%), Gaps = 83/572 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL----------KSRFVYTKLLAILGKAGRPH 245
L+KGL D ++ +S L + D + + +R Y LL+ L GR
Sbjct: 43 LVKGLCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMS 102
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+A ++ M++ PD+ Y+++ +VG L E +K+ + ++
Sbjct: 103 DAQALYERMIK-AGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRG----------- 150
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
PD+V YNA++N + + + +++ L P TY + + ++G+
Sbjct: 151 ----FVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRV 206
Query: 366 D------------------------LVHEFFR---------KMAKSGEAIGALTYKVLVR 392
D L E R KM +G ++Y L+
Sbjct: 207 DEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIH 266
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS- 451
E ++EA+ ++ ++G Y L L R +A + + ++H
Sbjct: 267 GLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL--VKHGL 324
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 510
+P IT+T I G ++D + + + M + C P++ + NA++ + +A+
Sbjct: 325 EPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEV 384
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
L S P+ ++++++ A +W+ +K M G +
Sbjct: 385 LLSGMEAKGCS-------------PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 431
Query: 571 DQTKHAWL---LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
+ L L +A + G+ FD+++E G +P + ++ ++ + A
Sbjct: 432 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 491
Query: 628 ALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 687
L+ AM + L D+ +L A+ IT + +
Sbjct: 492 RLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTI---I 548
Query: 688 HALCRSEKERDLSSSAHFGSQAIDISPLHGIH 719
ALC+ E D + + GS + P G++
Sbjct: 549 SALCKQEMV-DKALALFDGSLEAGVVPTSGMY 579
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P A T G+ + +L+SGK + H F ++ G T+ + + +I +A
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQTV 72
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M + G Y L LCN GR DA + E++ +S P +T+ L+
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYS-PDVVTYNTLLHGFC 131
Query: 467 DGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G +D+ + IF +K P++ T NA++ + + D +A+ + + +
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES------ 185
Query: 526 LSGDGAPLKPDEYTYSSMLEA 546
L PD TY+S++
Sbjct: 186 -------LVPDVVTYNSLVNG 199
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 100/262 (38%), Gaps = 22/262 (8%)
Query: 429 LCNNGRWQDAMLVVEK--IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 486
L +G+ + A VE+ +K L I +GL +S I D ++F M+ H
Sbjct: 26 LLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRAS----RIGDAQTVFDGMRKHGF 81
Query: 487 -PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PN T NA+L S A+ L+E +A GY+ PD TY+++L
Sbjct: 82 WPNRITYNALLSGLCNGGRMSDAQALYERMIKA---GYS----------PDVVTYNTLLH 128
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+ + ++ G G D + L+ +A K + ++ +P
Sbjct: 129 GFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP 188
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRI--SRDKLEK 663
+ + ++ ++A LI ++P IT R+ +R LEK
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248
Query: 664 LLNALCNCNAASSEITVSNLSR 685
++ C + S + L+R
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAR 270
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 160/370 (43%), Gaps = 40/370 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK---ELVKL 286
YT ++ + K + E+ RI N M+E L P + Y+++ + G ++ E++ L
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEK-GLVPSVVTYNALIRGYCEEGRIEAALEILGL 414
Query: 287 IERMRQKPSKRI-----------KNMHR------KNWDPVLEPDLVVYNAVLNACVPSHQ 329
+E +P++R K++H+ K + L P LV YN++++ +
Sbjct: 415 MESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH 474
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+ + + L+++GL P TY + ++ + +S + + + F + + G + Y
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTA 534
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ + GKI+EA++ + M + +S Y L +C G+ Q+ + +VE + +
Sbjct: 535 LIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG 594
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKA 508
KP T+T LI + G D +F M +P++ T A + Y + +A
Sbjct: 595 -VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEA 653
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-SATAHQWEYFEYVYKGMALSG 567
+ + A + PD TY+ ++ A ++ F V K M +G
Sbjct: 654 EGMMARMIEAG-------------VMPDSLTYTLLISAYERLGLAYDAFN-VLKRMLDAG 699
Query: 568 CQLDQTKHAW 577
C D + W
Sbjct: 700 C--DPSHPIW 707
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 194/494 (39%), Gaps = 60/494 (12%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
+V + Q+GL L+ G A V + + +K ++ YT ++
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNM---MPNKGCRRNEVSYTTIIH 292
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
L +AGR E + +F M ED + YP + Y + L E + L MR++ +
Sbjct: 293 GLCEAGRIDEGISLFKKMRED-DCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCE 351
Query: 297 RIKNMH------------------RKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVF 334
N+H R+ + ++E P +V YNA++ + +
Sbjct: 352 --PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAAL 409
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE---FFRKMAKSGEAIGALTYKVLV 391
+ + + +P+ TY E++ K VH+ KM +S +TY L+
Sbjct: 410 EILGLMESNNCRPNERTYN---ELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLI 466
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ G + A + +++ G+V Y LC + R ++A + +K +
Sbjct: 467 HVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKE-KGI 525
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
K E+ +T LI G ID+ IS+ + M + C PN T N+++ + +
Sbjct: 526 KANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLS 585
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
+ E ++ +KP TY+ ++E +++ V+ M G +
Sbjct: 586 MVENMSKMG-------------VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKP 632
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
D + + +G E ++EAG +P L +T +LI A YE+
Sbjct: 633 DVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYT-LLISA-----YERL---- 682
Query: 631 NAMAYAPFHITERQ 644
+AY F++ +R
Sbjct: 683 -GLAYDAFNVLKRM 695
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/470 (19%), Positives = 185/470 (39%), Gaps = 46/470 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F YT L+ + + A ++FN+M + + +Y ++ L + G + E + L +
Sbjct: 250 FTYTSLILGYCRNNDVNSAYKVFNMM-PNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFK 308
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+MR+ P + Y +++A + + +F ++R+ +P+
Sbjct: 309 KMREDDCY---------------PTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPN 353
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + ++ M + K D +M + G +TY L+R + EEG+I A+ +
Sbjct: 354 VHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILG 413
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
ME Y EL C AM ++ K+ + + P +T+ LI
Sbjct: 414 LMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLT-PSLVTYNSLIHVQCKA 472
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGY 523
GH D + +K++ P+ T + + ++ +A +LF E+ +AN Y
Sbjct: 473 GHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMY 532
Query: 524 T-FLSGDGAPLK-----------------PDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
T + G K P+ TY+S++ + + + + M+
Sbjct: 533 TALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSK 592
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G + + L+ E R G F+ ++ G P +T + N ++
Sbjct: 593 MGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKE 652
Query: 626 AVALINAMAYAPFHITERQWTELFESNEDRI-----SRDKLEKLLNALCN 670
A ++ M A +T L + E R+ + + L+++L+A C+
Sbjct: 653 AEGMMARMIEAGVMPDSLTYTLLISAYE-RLGLAYDAFNVLKRMLDAGCD 701
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 155/373 (41%), Gaps = 26/373 (6%)
Query: 134 LGSDYFAKNVEWHPEKRWRS---EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTE 190
G+D + ++ E R RS V+VD + + ++ + + M + GL+ +
Sbjct: 330 FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSV 389
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALR 249
L++G ++G A+ +L GL + + + + Y +L+ K H+A+
Sbjct: 390 VTYNALIRGYCEEGRIEAALEIL----GLMESNNCRPNERTYNELICGFSKRKHVHKAMT 445
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+ + MLE L P + Y+S+ + G KL++ +++
Sbjct: 446 LLSKMLES-KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG--------------- 489
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD Y+ ++ S + + +F L++ G+K + Y ++ ++GK D
Sbjct: 490 LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAI 549
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M + TY L+ +EGK+ E ++ V NM + GV T + Y L +
Sbjct: 550 SLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEM 609
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
G + A V ++ S H KP T+T I + G++ + + M + P+
Sbjct: 610 LREGDFDHANRVFNQMVSFGH-KPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPD 668
Query: 489 IGTVNAMLKVYSR 501
T ++ Y R
Sbjct: 669 SLTYTLLISAYER 681
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/483 (18%), Positives = 196/483 (40%), Gaps = 78/483 (16%)
Query: 212 VLDWVYGL-KDKRDLKSRFV---YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+LD++ + +D D+K + Y +LL +L + E R++ ML D + P+I
Sbjct: 159 LLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDM-IVPNIYTL 217
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+++ ++G + E + ++ Q L PD Y +++ +
Sbjct: 218 NTMVNAYSKMGNIVEANLYVSKIFQAG---------------LSPDSFTYTSLILGYCRN 262
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD--------------------- 366
+ + VF + G + + +Y + + ++G+ D
Sbjct: 263 NDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTY 322
Query: 367 --LVH------------EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++H + F +M + TY V+V A +E K++E+ + M +
Sbjct: 323 TVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMME 382
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+G+V + Y L C GR + A+ ++ ++S + +P E T+ LI H+
Sbjct: 383 KGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES-NNCRPNERTYNELICGFSKRKHVH 441
Query: 473 DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+++ M + P++ T N+++ V + F A +L + L +G
Sbjct: 442 KAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLD-----------LLKENG- 489
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L PD++TYS ++ + + E ++ + G + ++ + L+ +AGK +
Sbjct: 490 -LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGK---I 545
Query: 592 EHAFDSLLEAGE----IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 647
+ A SLLE +P+ + ++ + ++ ++++ M+ T +T
Sbjct: 546 DEAI-SLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTI 604
Query: 648 LFE 650
L E
Sbjct: 605 LIE 607
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 18/202 (8%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAV 272
D LK+K + +YT L+ KAG+ EA+ + M EDC P+ + Y+S+
Sbjct: 515 DLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDC--LPNSSTYNSLIY 572
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
+ + G ++E + ++E M + K P + Y ++ + +
Sbjct: 573 GVCKEGKVQEGLSMVENMSKMGVK---------------PTVATYTILIEEMLREGDFDH 617
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
VF Q+ G KP TY + SG +M ++G +LTY +L+
Sbjct: 618 ANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLIS 677
Query: 393 AFWEEGKINEAVAAVRNMEQRG 414
A+ G +A ++ M G
Sbjct: 678 AYERLGLAYDAFNVLKRMLDAG 699
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 179/425 (42%), Gaps = 33/425 (7%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
+N++++ + ++P L+ +N ++N + + + Q+ + L P TY +
Sbjct: 183 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
++ DL F +M K G ++TY L+ EG+++EA+ + M ++G+ T
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPT 302
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y LC ++A+ +V ++K R +P T+T LI G ++ I ++
Sbjct: 303 VYTYTLPITALCAIEHEEEAIELVARMKK-RGCRPNVQTYTALISGLSRLGKLEVAIGLY 361
Query: 479 QHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYT------FLS 527
M K+ PN T NA++ FS A ++F + AN+ Y L
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421
Query: 528 GD-------------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
GD PL P TY++++ T + M +GC+ D+
Sbjct: 422 GDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ L+ S+ GK F ++E G P+P+ +T ++ + A++L+ M
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540
Query: 635 YAPFHITERQWTELFE--SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
+ + + S E+R S + EK+ + + + IT + L + LCR
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFS--EAEKICDKMVEQGLLPNVITYTTL---IDGLCR 595
Query: 693 SEKER 697
+ + +
Sbjct: 596 NGRTQ 600
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 168/406 (41%), Gaps = 38/406 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L G + A+ + W+ G L + Y +++ L G +A+ +F ML
Sbjct: 379 LINELCVGGRFSTALKIFHWMEG---HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L P + Y+++ G + +L++ M++ EPD
Sbjct: 436 KMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC---------------EPDEW 479
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +++ + + + F+++ + GL P+ +Y ++ + GK D+ ++M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +Y ++ +E + +EA M ++G++ Y L LC NGR
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
Q A + ++ R P T++ LI G D+ + M + CEP + T +
Sbjct: 600 QFAFKIFHDMEK-RKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYST 654
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ R F +A++L ++ G+ PD Y S+L A + +
Sbjct: 655 LVSGLCRKGRFYEAEQLVKDM---KERGFC----------PDREIYYSLLIAHCKNLEVD 701
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ ++ + G QL + + L+ +AG+ + FD++LE
Sbjct: 702 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE 747
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 119/572 (20%), Positives = 218/572 (38%), Gaps = 92/572 (16%)
Query: 213 LDWVYGLKDKRDLK-----SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
LD +G+ D R +K + Y+ L+ L GR EAL + M+E + P + Y
Sbjct: 249 LDLAFGVFD-RMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-GIEPTVYTY 306
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSK--------------RIK------NMHRKNWD 307
L + +E ++L+ RM+++ + R+ ++ K
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
L P+ V YNA++N ++ +F + G + TY ++ + G +
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
F KM K G +TY L+ + +G +N A + M++ G Y EL
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
G+ + A +++ + P +++T LI G +D +S+ + M++ C
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLN-PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN 545
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKE----LFEETTRANSSGYTFLSGDGA----------- 531
PN+ + NA++ S+ + FS+A++ + E+ N YT L DG
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI-DGLCRNGRTQFAFK 604
Query: 532 --------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
P+ YTYSS++ + + E M+ GC+ ++ L+
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLC 660
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI---------------------------- 615
R G+ + E + E G P + +LI
Sbjct: 661 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720
Query: 616 --QAIV-----QSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
+A++ E+A AL + M ++ E WT L + D KLL+ +
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780
Query: 669 CNCNAASSEITVSNLSRALHALCRSEKERDLS 700
+ N + T L R L + +S + L+
Sbjct: 781 ESKNFTPNIQTYVILGRELSRIGKSIESEPLA 812
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 121/297 (40%), Gaps = 23/297 (7%)
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
E+ +++ LS+ ++ K M + GL+ L+ GL G + A +
Sbjct: 548 VESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF- 606
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ ++ ++ L + + Y+ L+ L + G+ EA R+ + E P + Y ++ L
Sbjct: 607 --HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCE-----PTLDTYSTLVSGL 659
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G E +L++ M+++ PD +Y ++L A + +
Sbjct: 660 CRKGRFYEAEQLVKDMKERG---------------FCPDREIYYSLLIAHCKNLEVDHAL 704
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+F + G + + Y + + ++G+ + F M + + + VLV
Sbjct: 705 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+EG+++ + + ME + Y L L G+ ++ + +K+K L+ S
Sbjct: 765 LKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDS 821
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 181/457 (39%), Gaps = 47/457 (10%)
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
Q L+L+K D + DWVY +S F+ +L LG+A R A R F
Sbjct: 76 QTLRLIKVPAD------GLRFFDWVYNKGFSHKEQSFFL---MLEFLGRA-RNLNAARNF 125
Query: 252 NLMLED----CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKN---- 300
+E C D ++S+ + G GL +E V L + M++ PS N
Sbjct: 126 LFSIEKRSNGCVKLQD-RYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLS 184
Query: 301 ---------MHRKNWDPV-----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
M +D + + PD +N +++ + F +FK++
Sbjct: 185 ILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCN 244
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI--GALTYKVLVRAFWEEGKINEAV 404
P TY ++ + ++GK + H M K A+ ++Y L+R + + +I+EA+
Sbjct: 245 PDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEAL 304
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
M RG+ A Y L L R+ + + + P TF LI +
Sbjct: 305 LVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKA 364
Query: 465 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
D GH+D + +FQ M + P+ + + +++ + F KA+ LF E
Sbjct: 365 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKE---- 420
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
L G KP Y+ M E + + E V++ + G Q D + + L+
Sbjct: 421 -VLLGKN-ECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLITGLC 477
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
R GK +L +P P + E+LI +++
Sbjct: 478 REGKFKAAYELLVLMLRREFVPDPETY-EVLIDGLLK 513
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 171/435 (39%), Gaps = 38/435 (8%)
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-------VYTKLLAILGKAGRP 244
++ KLL G K + +++ +Y + + K+ F YT ++ L + R
Sbjct: 320 ELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRI 379
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
EA +F L+ P++ AY +V L + G +++ +K E M
Sbjct: 380 DEACELFE-KLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCV-------- 430
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
P Y V++ + VF+Q+ + G P TY ++ ++ K
Sbjct: 431 -------PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 483
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
D + M G A+TY +V F + INEA + M +RG ++
Sbjct: 484 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 543
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
L + GR ++A V+ ++ + R P I +T LI G + + +F M +
Sbjct: 544 LLSYYLSKGRAEEAYQVLTEMTA-RGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 602
Query: 485 -CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
C P+ T +++ +S+ A E+ E + SG G PD + Y+S+
Sbjct: 603 GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK---------SGVG----PDCFAYNSL 649
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
++ + + VY M SG + + L+ + GK F +LE E
Sbjct: 650 MDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDE 709
Query: 604 IPHPLFFTEMLIQAI 618
+P L +LI +
Sbjct: 710 VPPTLVSYTILIDGL 724
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 167/398 (41%), Gaps = 65/398 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +++ L + EA + FN M+++ PD+ A+ + LI
Sbjct: 58 YNTVISGLASIDKMDEAYKFFNSMIDN-GCEPDVIAFTT----------------LIHGF 100
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ ++ +M PD+ +Y +V++ + F + +++ +G P AA
Sbjct: 101 CKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAA 160
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + ++ + + G+ D +E F +M KSG +T+ L+ A GK++EA R M
Sbjct: 161 AYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREM 220
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDA-----MLVVEKIKSLRHSKPLEITFTGLIISS 465
+RG V L LC G+ +A +V +K+ + R + + L+
Sbjct: 221 IERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSR------VAYNSLMDGY 274
Query: 466 MDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G +DD + + M + C+ P+I T N ++ +SR + A ELF+
Sbjct: 275 CKLGRVDDGLKLLLQMVE-CDNFPDIQTYNILVAGFSRANRLDDALELFK---------- 323
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWE----YFE---------YVYKGMALSGCQL 570
LS G KP+ TY+++++ A + E +F+ V KG+A S
Sbjct: 324 -LLSSYGC--KPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADS---- 376
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAF----DSLLEAGEI 604
+ A L E + C A+ D LL+AG I
Sbjct: 377 KRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRI 414
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 109/512 (21%), Positives = 200/512 (39%), Gaps = 65/512 (12%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A A VL+D L + + ++ M +SG + + L++ L + G +A
Sbjct: 158 DAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACE-- 215
Query: 214 DWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+Y +R + V L+ L KAG+ EA I+ ++ + AY+S+
Sbjct: 216 --LYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAK-KVATSRVAYNSLMD 272
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
++G + + +KL+ +M + N+ PD+ YN ++ +++
Sbjct: 273 GYCKLGRVDDGLKLLLQM----------VECDNF-----PDIQTYNILVAGFSRANRLDD 317
Query: 333 VFWVFKQLRKSGLKPSAATY-----GL---------------AMEV---------MLQSG 363
+FK L G KP+AATY GL A++V + S
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSK 377
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
+ D E F K+ +G + + Y ++ + G+I + + +M V T + Y
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYT 437
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 482
+ LC DA V E++ + P IT+T LI +D+ + M
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQ-KGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 496
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
EP T +++ + + DM ++AKE+ + +P + ++S
Sbjct: 497 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC-------------EPGLFIFTS 543
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
+L + + E V M GC D + L+ G+ H FDS++E G
Sbjct: 544 LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 603
Query: 603 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
P L + ++ N E A ++ MA
Sbjct: 604 CAPDALTYGTIIQNFSKIGNVEAAGEILELMA 635
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/410 (18%), Positives = 165/410 (40%), Gaps = 34/410 (8%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
K+ SR Y L+ K GR + L++ M+E C+ +PDI Y+ + + L
Sbjct: 258 KKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVE-CDNFPDIQTYNILVAGFSRANRLD 316
Query: 282 ---ELVKLIERMRQKP-----SKRIKNMH--------RKNWDPVLEPDLVVYNAVLNACV 325
EL KL+ KP + I+ ++ + +D L D++ Y V+
Sbjct: 317 DALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL--DVISYTTVIKGLA 374
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
S + +F++L+ +G P+ Y ++ +L++G+ + + F M+ S
Sbjct: 375 DSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRT 434
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY V++ + + +A M Q+G V Y L + +A +++ +
Sbjct: 435 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 494
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 504
+ + +P +T+ ++ I++ + M++ CEP + ++L Y
Sbjct: 495 LT-KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK-- 551
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
+A+E ++ T + G PD Y+S+++ + + +V+ M
Sbjct: 552 -GRAEEAYQVLTEMTARG----------CAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 600
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
GC D + ++ S+ G + + ++G P + ++
Sbjct: 601 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 650
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 155/389 (39%), Gaps = 43/389 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT L+ KA + EA ++ ++ML P Y S+ ++ ++ E ++I
Sbjct: 469 ITYTTLIDGFSKASKMDEARKLLDVMLTK-GPEPTAVTYGSIVHGFCKLDMINEAKEVIA 527
Query: 289 RMRQK---PSKRI----------KNMHRKNWDPVLE-------PDLVVYNAVLNACVPSH 328
+MR++ P I K + + + E PD+++Y ++++ +
Sbjct: 528 QMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTG 587
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ VF + + G P A TYG ++ + G + E MAKSG Y
Sbjct: 588 RVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYN 647
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ + + ++++A M G+ A + L L +G+ A + +++
Sbjct: 648 SLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK 707
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 507
P +++T LI G + + S FQ M D P T +++ ++ +
Sbjct: 708 DEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPE 767
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS----MLEASATAHQWEYFEYVYKGM 563
AK+L E+ + + PD YS+ ++++S W+ F+ + K
Sbjct: 768 AKKLVEDMVKLG-------------VNPDVQAYSALITGLIDSSMVDTAWDVFQEMMK-- 812
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
GC ++ + L AG+ LE
Sbjct: 813 --RGCAPNEVTYKVLRRGFRAAGRALDLE 839
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 136/341 (39%), Gaps = 66/341 (19%)
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+K MH L PD+V N VLN + + +F ++ G +P+ +Y +
Sbjct: 8 LKEMHTTG----LMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK-------INEAVAAVR-- 408
+ K D ++FF M +G + + L+ F + G+ +N+A+ R
Sbjct: 64 GLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPD 123
Query: 409 -------------------------NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
M G + A+ Y+ L LC GR +A + E
Sbjct: 124 VFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFE 183
Query: 444 KIKSLRHSKPLE--ITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYS 500
+ +R S L +TF LI + + G +D+ +++ M + EP + ++++
Sbjct: 184 R---MRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240
Query: 501 RNDMFSKAKELFEE-------TTRA--NS--SGYTFLS--GDGAPLK---------PDEY 538
+ +A E+++ T+R NS GY L DG L PD
Sbjct: 241 KAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQ 300
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
TY+ ++ + A++ + ++K ++ GC+ + + ++
Sbjct: 301 TYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTII 341
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 76/205 (37%), Gaps = 55/205 (26%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G +A S+ + +K ++ V YT L+ LGKAGR EA F M
Sbjct: 684 LMHGLFKDGKTDRAFSLFKE---MLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEM 740
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ D + P+ Y S+ +L + G + E KL+E M
Sbjct: 741 I-DRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV----------------------- 776
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
K G+ P Y + ++ S D + F++
Sbjct: 777 ---------------------------KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQE 809
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGK 399
M K G A +TYKVL R F G+
Sbjct: 810 MMKRGCAPNEVTYKVLRRGFRAAGR 834
>gi|298712189|emb|CBJ33061.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 531
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 186/474 (39%), Gaps = 55/474 (11%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
EA+R+L D + + W + + L+LL+ + ++G A +
Sbjct: 91 EALRLLRD-MPSVGLVPDGWSYGATLGACAGTGQASTALRLLREMEERGIEATASNYKHA 149
Query: 216 VYGLKDKRD----------------LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
+Y D + L++ F Y +++ +AG+ +AL + M
Sbjct: 150 LYACCDSKTGENWEAAAALLRRSETLRNNFFYGRVIMACRRAGQWQKALEVLREM-SRVG 208
Query: 260 LYPDIAAYHSV--AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVY 317
L PDI Y +V + VG ++ + + R + K + L+ Y
Sbjct: 209 LAPDIFCYDTVISVACMSSVGAQWKIARDLLREQAKTG--------------VPCSLISY 254
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N VL+AC + + + + + +R G P +Y A+ ++ +++L R M +
Sbjct: 255 NLVLSACKKAGRPRQAVSLLRAMRGHGCSPDVISYNTAISACVKRREWELALFVLRDMQR 314
Query: 378 SGEAI--GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ +Y ++ G++++AV M + GV A Y +A +GRW
Sbjct: 315 PDSRLEPNTYSYGSVITVCATCGEVDQAVGLFDEMPEAGVKVDAFTYNSVAMAYARDGRW 374
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVN 493
+ A+ + + L H + +++T I + G D +S+ + M++ +PN T
Sbjct: 375 RQAISTLSDMSELGHVGDV-VSYTAAIRACGWAGECDRALSLLREMREEKGVKPNEKTFA 433
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A + + + EL E R S+G+ PD Y+S ++A QW
Sbjct: 434 AAISACGHGGRWERGLELLSEMPR--STGFL----------PDADCYTSAIKACGKGGQW 481
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
E + + A G D + + V + + + L AF G +P+P
Sbjct: 482 EQAFTLLREAAAEGTTPDAKTYEFHRVSSPSSPEVKLRRGAFF----VGAMPYP 531
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/356 (17%), Positives = 145/356 (40%), Gaps = 35/356 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P++ +A LNAC + QW+ + + R+ G + + +Y A+ + +++
Sbjct: 34 ITPNVKSVSAALNACGQAGQWQRCLELLGEAREWGTELNEVSYNTAISACARRDRFEEAL 93
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE--LAC 427
R M G +Y + A G+ + A+ +R ME+RG+ TAS Y AC
Sbjct: 94 RLLRDMPSVGLVPDGWSYGATLGACAGTGQASTALRLLREMEERGIEATASNYKHALYAC 153
Query: 428 CLCNNG-RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 485
C G W+ A ++ + ++LR++ + +I++ G + + + M +
Sbjct: 154 CDSKTGENWEAAAALLRRSETLRNN----FFYGRVIMACRRAGQWQKALEVLREMSRVGL 209
Query: 486 EPNIGTVNAMLKVYSRNDMFSK---AKELFEETTRANSS----GYTFL------------ 526
P+I + ++ V + + ++ A++L E + Y +
Sbjct: 210 APDIFCYDTVISVACMSSVGAQWKIARDLLREQAKTGVPCSLISYNLVLSACKKAGRPRQ 269
Query: 527 ------SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW--L 578
+ G PD +Y++ + A +WE +V + M +L+ +++ +
Sbjct: 270 AVSLLRAMRGHGCSPDVISYNTAISACVKRREWELALFVLRDMQRPDSRLEPNTYSYGSV 329
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + G+ FD + EAG + + + + +A++ ++ M+
Sbjct: 330 ITVCATCGEVDQAVGLFDEMPEAGVKVDAFTYNSVAMAYARDGRWRQAISTLSDMS 385
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 130/319 (40%), Gaps = 31/319 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y ++A GR AL I M E + P+ Y +V +VG + E VK+ +
Sbjct: 147 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 206
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K ++P+ V+YNA++ + ++ + G+ +
Sbjct: 207 MLTKGE--------------VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 252
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
ATY L + + G+ +E +M G A TY +L+ +EG + +A+ N
Sbjct: 253 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 312
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +RGV T Y L L G+ Q+ L E ++ R +P + + LI S
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR--RGIRPDLVLYNALINSHSTS 370
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G+ID I M K P+ T N +++ +A++L +E T
Sbjct: 371 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG-------- 422
Query: 528 GDGAPLKPDEYTYSSMLEA 546
++PD TY++++
Sbjct: 423 -----IQPDLVTYNTLISG 436
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 158/381 (41%), Gaps = 49/381 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL-KSRFVYTKLLAILGKAGRPHEALRIFNLM 254
++ G +G + A LD + ++++ + +++ Y +++ K GR EA+++F+ M
Sbjct: 151 VIAGFCSRGRVQAA---LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 207
Query: 255 LEDCNLYPDIAAYHS-------------------------VAVTLGQVGLLKELVKLIER 289
L + P+ Y++ VA+T+ LL + + R
Sbjct: 208 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 267
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + ++ M K L PD+ YN ++N K +F+ + + G++ +
Sbjct: 268 GTEA-YELVEEMGGKG----LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 322
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + G+ + F + + G + Y L+ + G I+ A +
Sbjct: 323 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 382
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME++ + Y L LC GR +A +++++ R +P +T+ LI G
Sbjct: 383 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE-RGIQPDLVTYNTLISGYSMKG 441
Query: 470 HIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ D + I M + P + T NA+++ +N A+ + +E +G T
Sbjct: 442 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE---NGIT---- 494
Query: 529 DGAPLKPDEYTYSSMLEASAT 549
PD+ TY S++E T
Sbjct: 495 ------PDDSTYISLIEGLTT 509
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 19/247 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ K G +AL IF M + + Y ++ L + G ++E KL +
Sbjct: 288 FTYNILINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFD 346
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ + PDLV+YNA++N+ S F + ++ K + P
Sbjct: 347 EAVRRG---------------IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 391
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY M + G+ D + +M + G +TY L+ + +G + +A+
Sbjct: 392 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 451
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI--ISSM 466
M +G T Y L LC NG+ DA +V+++ P + T+ LI +++
Sbjct: 452 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE-NGITPDDSTYISLIEGLTTE 510
Query: 467 DGGHIDD 473
D IDD
Sbjct: 511 DERAIDD 517
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/340 (17%), Positives = 123/340 (36%), Gaps = 32/340 (9%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N +L A ++ +++ L S A+ + + + + L + FR
Sbjct: 52 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLP 111
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+ T+ +++R GK A+ +R M + V Y + C+ GR Q
Sbjct: 112 ----LCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQA 163
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAM 495
A+ ++ +++ P + T+ +I G +D+ + +F M K +P NA+
Sbjct: 164 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 223
Query: 496 LKVYSRNDMFSKA----KELFEETTRANSSGYT------FLSGDGA------------PL 533
+ Y A + E + Y F+ G G L
Sbjct: 224 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 283
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
PD +TY+ ++ + +++ M+ G + + L+ S+ G+ +
Sbjct: 284 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 343
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
FD + G P + + ++ N ++A ++ M
Sbjct: 344 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 162/361 (44%), Gaps = 36/361 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L L KG +A D + +K+ L +R + L++ K G EA ++ +LM
Sbjct: 253 ILDVLCKKGKLNEAR---DLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ N+ PD+ Y+ + L + G + E +L + M +N+ L PD+V
Sbjct: 310 QN-NVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEM--------ENLK-------LLPDVV 353
Query: 316 VYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN ++N C S KG F + ++ G+KP+A TY + ++ ++ GK D RK
Sbjct: 354 TYNTLINGCFDCSSSLKG-FELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRK 412
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M +SG + +T+ L+ + + G+++EA + M ++G+ + + LC +
Sbjct: 413 MEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERK 472
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 493
DA ++ S R E+++ LI+ G + + ++ MK+ P+I T N
Sbjct: 473 LDDAYKLLSS-ASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYN 531
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
M+ + K + ++ SG L PDE TY++++ Q
Sbjct: 532 TMIGGLCHS---GKTDQSIDKLNELLESG----------LVPDETTYNTIILGYCREGQV 578
Query: 554 E 554
E
Sbjct: 579 E 579
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 139/346 (40%), Gaps = 41/346 (11%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
RPH A +IFN M + +L P++ ++ LI + + PSK
Sbjct: 152 CNRPHHAAQIFNRM-KRLHLKPNLLTCNT----------------LINALVRYPSKPSVY 194
Query: 301 MHRKNWDPVLEPDLVV----YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+ + + V++ + V +N ++ C ++ + +++ P +Y +
Sbjct: 195 LSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTIL 254
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+V+ + GK + + M +G T+ +LV + + G + EA + M Q V+
Sbjct: 255 DVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVL 314
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
Y L LC +G+ +A + +++++L+ P +T+ LI D
Sbjct: 315 PDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLL-PDVVTYNTLINGCFDCSSSLKGFE 373
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ M+ +PN T N ++K Y + A E + SG++ P
Sbjct: 374 LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAG---NELRKMEESGFS----------P 420
Query: 536 DEYTYSSMLEASATAHQW-EYF----EYVYKGMALSGCQLDQTKHA 576
D T+++++ A + E F E KG+ ++ L+ H
Sbjct: 421 DCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHT 466
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 89/230 (38%), Gaps = 20/230 (8%)
Query: 213 LDWVYGLKDKRDLKSRFV----YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
LD Y L + FV Y L+ K G+ EA+++++ M E + P I Y+
Sbjct: 473 LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEK-EIIPSIITYN 531
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L G + + + + + L PD YN ++
Sbjct: 532 TMIGGLCHSGKTDQSIDKLNELLESG---------------LVPDETTYNTIILGYCREG 576
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
Q + F ++ K KP T + + + G D + F G+AI A+TY
Sbjct: 577 QVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYN 636
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
++ +E + EA + ME++ + Y + L + GR ++A
Sbjct: 637 TIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEA 686
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/379 (18%), Positives = 140/379 (36%), Gaps = 34/379 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G D S + ++D + G K + + V K GK LR +
Sbjct: 358 LINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR----KM 413
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ PD ++++ + G L E ++++ M +K L+ + V
Sbjct: 414 EESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG---------------LKMNSV 458
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +L+ + + + K G +YG + + GK + + +M
Sbjct: 459 TLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEM 518
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ +TY ++ GK ++++ + + + G+V + Y + C G+
Sbjct: 519 KEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQV 578
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
+ A K+ + KP T L+ G +D + +F + + T N
Sbjct: 579 EKAFQFHNKMVK-KSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNT 637
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + D F +A +L E + L PD YTY+++L A A A + +
Sbjct: 638 IISGLCKEDRFEEAFDLLAEM-------------EEKKLGPDCYTYNAILSALADAGRMK 684
Query: 555 YFEYVYKGMALSGCQLDQT 573
E + G DQT
Sbjct: 685 EAEEFMSRIVEQGKLQDQT 703
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 178/431 (41%), Gaps = 74/431 (17%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ L + G+P EA IF ++E + P + +Y ++ L
Sbjct: 11 RTVRSR---TKLMNFLVEKGKPQEAESIFYSLIEGGH-KPSLISYTTLLAALTMQKRFDS 66
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ +I ++ + + PD + +NAV+NA S + F ++++
Sbjct: 67 IYSIISQVEENG---------------MNPDSIFFNAVINAFSESGNMESAMETFWKMQE 111
Query: 343 SGLKPSAAT-------YGLA---------MEVMLQSGK-------YDLVH---------- 369
+G+KP+ +T YG+A +E+M Q G Y+++
Sbjct: 112 NGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRIT 171
Query: 370 ---EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
KM SG +TY + A+ ++G +++A + M+ GV +
Sbjct: 172 EAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIM 231
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI---ISSMDGGHIDDCISIFQHMKD 483
C GR ++A+ ++K L P + F LI ++ MD +D+ +++ +
Sbjct: 232 SGYCKEGRIREALRFAYRMKEL-GIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEF-- 288
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
+P++ T + ++ +S K +E+F++ +A ++PD + YS +
Sbjct: 289 GVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAG-------------IEPDAHAYSIL 335
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
+ A + E E + M SG Q + ++ AGK FD + + G
Sbjct: 336 AKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGI 395
Query: 604 IPHPLFFTEML 614
P+ F ++
Sbjct: 396 SPNLKTFETLI 406
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 124/309 (40%), Gaps = 30/309 (9%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTK 233
WK M ++G+ T L+KG G G +++ +L+ + + ++K Y
Sbjct: 107 WK----MQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLEL---MSQEGNVKPNLRTYNV 159
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ- 292
L+ R EA + M+ + PD+ Y+++A Q G L + +I M+
Sbjct: 160 LVRAWCNKKRITEAWNVVYKMIAS-GIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNN 218
Query: 293 --KPSKRIKNMHRKNW-----------------DPVLEPDLVVYNAVLNACVPSHQWKGV 333
+P++R + + + + P+LV++N+++ V GV
Sbjct: 219 GVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGV 278
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
V + + G+KP T+ M +G + E F M K+G A Y +L +
Sbjct: 279 DEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKG 338
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ + +A + M + G ++ + C+ G+ A+ V +K+ R P
Sbjct: 339 YVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKM-CQRGISP 397
Query: 454 LEITFTGLI 462
TF LI
Sbjct: 398 NLKTFETLI 406
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 179/434 (41%), Gaps = 48/434 (11%)
Query: 125 NWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQS 184
++D V D+F + E R L++ L + + M +
Sbjct: 158 GLCVEDRVSEALDFFHQMFE----TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
GL T+ ++ G+ KG A+++L + + + + +Y+ ++ L K GR
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS--HIIPNVVIYSAIIDSLCKDGRH 271
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+A +F M E ++PD+ Y+S+ V G + +L++ M + RK
Sbjct: 272 SDAQNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM----------LERK 320
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
+ PD+V YNA++NA V ++ ++ ++ G+ P+ TY ++ + +
Sbjct: 321 -----ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
D F MA G + +T+ L+ + +I++ + + M + G+V + Y
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-- 482
L G A+ +++++ S P +T L+ D G + D + +F+ M+
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMIS-SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 483 ----------DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ EP++ T N ++ F +A+EL+EE
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG------------- 541
Query: 533 LKPDEYTYSSMLEA 546
+ PD TYSSM++
Sbjct: 542 IVPDTITYSSMIDG 555
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 144/334 (43%), Gaps = 16/334 (4%)
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+L+ ++ RM ++P I ++++K + D+ +N ++ + F ++
Sbjct: 84 KLMGVVVRM-ERPDLVI-SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
K GL P T+ + + + +FF +M ++ +T+ L+ EG+I
Sbjct: 142 KLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
EAVA + M + G+ T Y + +C G A+ ++ K++ + H P + ++ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 462 IISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
I S G D ++F M++ P++ T N+M+ + + +S A++L +E
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
S PD TY++++ A ++ E +Y M G + ++ ++
Sbjct: 322 S-------------PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + EH F + G P+ + F ++
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ G + AL + M+ L PDI ++ L G LK+ +++ + M
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK K + H N +EPD+ YN +++ + ++ +++++ G+ P
Sbjct: 492 -QKSKKDLDASHPFNG---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ + + + D + F M + +T+ L+ + + G++++ + M
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+RG+V A Y L C G A+ + +++ S
Sbjct: 608 GRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 149/401 (37%), Gaps = 56/401 (13%)
Query: 181 MNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
M + G+ +FT M+ G G W A +L + K D+ + Y L+
Sbjct: 281 MQEKGIFPDLFTYNSMIV---GFCSSGRWSDAEQLLQEMLERKISPDVVT---YNALINA 334
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--- 294
K G+ EA +++ ML + P+ Y S+ + L + M K
Sbjct: 335 FVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 295 --------------SKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+KRI + + + + L D YN +++ +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA-----------LT 386
+++ SGL P T ++ + +GK E F+ M KS + + A T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y +L+ EGK EA M RG+V Y + LC R +A + + +
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF 505
S S P +TFT LI G +DD + +F M + N T ++ + +
Sbjct: 574 SKSFS-PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ A ++F+E SSG + PD T +ML
Sbjct: 633 NGALDIFQEMI---SSG----------VYPDTITIRNMLTG 660
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 101/255 (39%), Gaps = 24/255 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ ++E + A + +++ L+ L LL+ + G ++ + GL
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D LK ++ ++ K+ + +A FN + PD+ Y+ + L G
Sbjct: 477 DNGKLKDAL---EMFKVMQKSKKDLDASHPFN------GVEPDVQTYNILISGLINEGKF 527
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E +L E M HR + PD + Y+++++ + +F +
Sbjct: 528 LEAEELYEEMP----------HRG-----IVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
P+ T+ + ++G+ D E F +M + G A+TY L+ F + G I
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 401 NEAVAAVRNMEQRGV 415
N A+ + M GV
Sbjct: 633 NGALDIFQEMISSGV 647
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 178/439 (40%), Gaps = 35/439 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G QA S+ D+ + YT ++ L K + EA+ + +
Sbjct: 5 LINGLVKAGMLIQAHSLAQETTTNGCTIDIHT---YTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P IA Y+++ L ++G L+E + L+ RK D PD+V
Sbjct: 62 AN-GCTPTIATYNALLNGLCKMGRLEEAIDLL---------------RKIVDNGCTPDVV 105
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++++ + + +FK++ GL Y + +LQ+GK ++ M
Sbjct: 106 TYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTM 165
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +T ++ + G+I AV ++ME RG+ VY L LC +
Sbjct: 166 TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 225
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
A+ ++ ++K P IT+ LI G + + F M + C+P++ T N
Sbjct: 226 DCALEMLAQMKK-AFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNI 284
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + + A +F++ + + S P+ TY +++ Q
Sbjct: 285 LISGFCKAGNTDAACGVFDDMSSSRCS-------------PNVVTYGTLISGLCKRRQLT 331
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
Y+ M GC D ++ L+ ++GK FD + +G + + T ++
Sbjct: 332 KASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLI 390
Query: 615 IQAIVQSNYEKAVALINAM 633
+ ++AV+L NA+
Sbjct: 391 FHLCKANRVDEAVSLFNAI 409
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 152/354 (42%), Gaps = 21/354 (5%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L +++ + + +K + M GL L++GL G QA SV +
Sbjct: 110 LIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKT---MT 166
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ + + ++ L KAGR A+RIF M E L P+ Y ++ L + +
Sbjct: 167 SQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKM 225
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++++ +M++ PD + YN +++ S F ++
Sbjct: 226 DCALEMLAQMKK---------------AFCTPDTITYNILIDGLCKSGDVAAARAFFDEM 270
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
++G KP TY + + ++G D F M+ S + +TY L+ + ++
Sbjct: 271 LEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQL 330
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+A ++M++RG + VY L LC +G+ + ++ ++++ R T T
Sbjct: 331 TKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME--RSGVANSQTRTR 388
Query: 461 LIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
LI +D+ +S+F ++ P+ N+++ ++ ++ + +++E
Sbjct: 389 LIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQE 442
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 125/320 (39%), Gaps = 50/320 (15%)
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + + ++++G H ++ +G I TY +V + KI EAVA + +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI-----------------------KS 447
G T + Y L LC GR ++A+ ++ KI +S
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 448 LRHSKPLE-----------ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 495
K + + +T LI + G I S+++ M C P++ T++ M
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
+ D KA R ++ F S + L P+E YS+++ A + +
Sbjct: 181 I------DGLCKAG-------RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 227
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
+ M + C D + L+ ++G FD +LEAG P ++ +LI
Sbjct: 228 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPD-VYTYNILI 286
Query: 616 QAIVQS-NYEKAVALINAMA 634
++ N + A + + M+
Sbjct: 287 SGFCKAGNTDAACGVFDDMS 306
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A + D + K D+ + Y L++ KAG A +F+ M
Sbjct: 250 LIDGLCKSGDVAAARAFFDEMLEAGCKPDV---YTYNILISGFCKAGNTDAACGVFDDMS 306
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P++ Y + L+ L K R K S ++M + PD
Sbjct: 307 SS-RCSPNVVTYGT---------LISGLCK--RRQLTKASLYYQHMKERGC----PPDSF 350
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VY+++++ S + +G +F ++ +SG+ S L + ++ + D F +
Sbjct: 351 VYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLFNAI 409
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
K G Y ++ A + GK+NE A + M
Sbjct: 410 RKEGMP-HPYAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 170/411 (41%), Gaps = 48/411 (11%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+ Q ++ +W L++ S Y +++ + GKAG EA+ FN M ED PD
Sbjct: 126 FPQTLAFFNWATNLEEFG--HSPEPYMEMIDLAGKAGLAAEAVHAFNRM-EDYGCKPDKI 182
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
A+ V +L + E + ++ + EPD+VVY ++++
Sbjct: 183 AFSVVISSLSKKRRAIEAQSFFDSLKDR----------------FEPDVVVYTSLVHGWC 226
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ VF +++ +G++P+ TY + ++ + +SG+ H+ F +M G A+
Sbjct: 227 RAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAI 286
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
T+ L+R + G+ + + M++ G A Y L C + ++A+ ++ +
Sbjct: 287 TFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSV 346
Query: 446 K---SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS- 500
K +L S +F + G ++ +F MKD C PN T N ++++++
Sbjct: 347 KKGCNLNAS-----SFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFAD 401
Query: 501 --RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
DM K ++ +E ++P+ TY ++ W
Sbjct: 402 KKSTDMVLKLRKEMDENE----------------IEPNANTYRVLISTFCGIGHWNNAYS 445
Query: 559 VYKGMALSGC-QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+K M C + + +L + +AG+ E + ++ G + PL
Sbjct: 446 FFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 496
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 102/261 (39%), Gaps = 43/261 (16%)
Query: 441 VVEKIKSLRHSKPLEIT-------------------FTGLIISSMDGGHIDDCISIFQHM 481
V+EK +RH P T + +I + G + + F M
Sbjct: 113 VIEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKAGLAAEAVHAFNRM 172
Query: 482 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
+D+ C+P+ + ++ S+ +A+ F+ +PD Y
Sbjct: 173 EDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR--------------FEPDVVVY 218
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+S++ A E V+ M ++G Q + ++ ++ R+G+ F +++
Sbjct: 219 TSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMID 278
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRIS 657
G P+ + F ++ + EK + + N M P IT + L ES+ +
Sbjct: 279 VGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT---YNFLIESHCRDDN 335
Query: 658 RDKLEKLLNAL---CNCNAAS 675
++ K+LN++ CN NA+S
Sbjct: 336 LEEAVKILNSVKKGCNLNASS 356
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 173/413 (41%), Gaps = 43/413 (10%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
D + +K + L +R Y L+ K G EA + LM ++ NL PD+ Y+ +
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQN-NLLPDVWTYNMLING 322
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L G ++E KL + M +N+ L PD+V YN ++N C+ +
Sbjct: 323 LCNEGRIEEAFKLRDEM--------ENLK-------LLPDVVSYNTLINGCLEWSKISEA 367
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F + +++ + G+KP+A T+ + ++ + GK D KM +SG + +TY L+
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLING 427
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ + G + EA + M ++ + + + LC + ++A ++ + R
Sbjct: 428 YCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK-RGYFI 486
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAML----KVYSRNDMFSKA 508
E+++ LI+ G++D + ++ MK+ P+ T N ++ + SK
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546
Query: 509 KELFEETTRANSSGY-TFLSG---DG--------------APLKPDEYTYSSMLEASATA 550
EL E + + Y T L G +G KPD +T + +L
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
E ++ G +D + L+ + G+ L+ AF+ L E E
Sbjct: 607 GVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR---LDDAFNLLSEMEE 656
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 164/412 (39%), Gaps = 54/412 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL+ L+ G G ++A +V++ + L + Y L+ L
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL---MTQNNLLPDVWTYNMLINGLCN 325
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKR 297
GR EA ++ + M E+ L PD+ +Y+++ + + E KL+E M +K P+
Sbjct: 326 EGRIEEAFKLRDEM-ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 298 IKNMHRKNW------------------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
N+ K W + PD V YN ++N + F +
Sbjct: 385 THNIMVK-WYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + +K + T + + + K + ++ K G I ++Y L+ ++++G
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEIT 457
++ A+ M+++ ++ + Y + LC G+ + A + K+ L S P E T
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA---ISKLNELLESGLLPDETT 560
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 514
+ ++ G ++ M ++ +P++ T N +L+ + KA +LF
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWV 620
Query: 515 ------TTRANSSGYTFLSGDG--------------APLKPDEYTYSSMLEA 546
T ++ T L +G L PD YTY++++ A
Sbjct: 621 SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 98/495 (19%), Positives = 186/495 (37%), Gaps = 74/495 (14%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G+PH A +IF M + L P++ ++ LL LV+ PS
Sbjct: 147 QSGQPHHAFQIFKKM-KRLRLRPNLLTCNT---------LLNSLVRY-------PSSHSV 189
Query: 300 NMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ R+ ++ ++ P++ +N V+ +++K + K P TY
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTI 249
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + + G+ + M G TY +LV + + G + EA + M Q +
Sbjct: 250 LDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ Y L LCN GR ++A + +++++L+ P +++ LI ++ I +
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL-PDVVSYNTLINGCLEWSKISEAF 368
Query: 476 SIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
+ + M + +PN T N M+K Y + A T+ SG++
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI---TKMEESGFS---------- 415
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
PD TY++++ A M ++D +L R K LE A
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK---LEEA 472
Query: 595 FDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+ L A G + + +++ N ++A+ L W E+ E
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKL---------------WDEMKEK 517
Query: 652 NEDRISRDKLEKLLNALCNCNAASSEITVSN-------------LSRALHALCRSEKERD 698
E S ++ LC C I+ N + LH CR E D
Sbjct: 518 -EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR---EGD 573
Query: 699 LSSSAHFGSQAIDIS 713
+ + F ++ ++ S
Sbjct: 574 VEKAFQFHNKMVENS 588
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 16/208 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ K G AL++++ M E + P Y+ + L Q G ++ + + +
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEK-EIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L PD YN +L+ + F ++ ++ KP
Sbjct: 550 LESG---------------LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T + + + G + + F G+AI +TY L+ + +EG++++A + M
Sbjct: 595 TCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDA 438
E++ + Y + L ++GR ++A
Sbjct: 655 EEKELGPDHYTYNAIITALTDSGRIREA 682
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 60/330 (18%), Positives = 127/330 (38%), Gaps = 24/330 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ---SGKYDLV 368
P + + + A V S Q F +FK++++ L+P+ T + +++ S
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
E F K G T+ +++ + E K +AV + M + Y +
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
LC GR DA ++ +KS R P T+ L+ G + + ++ + M +++ P
Sbjct: 253 LCKKGRLGDARDLLMDMKS-RGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++ T N ++ +A +L +E + L PD +Y++++
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEM-------------ENLKLLPDVVSYNTLINGC 358
Query: 548 ATAHQWEYFEYVYK---GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+W +K M+ G + + H ++ + GK + + E+G
Sbjct: 359 L---EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
P + + ++ N +A ++ M
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 99/266 (37%), Gaps = 19/266 (7%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
K + ++ + ++ L + + +K + + G E L+ G G+ +
Sbjct: 447 KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDR 506
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+ + D +K+K + S Y ++ L + G+ +A+ N +LE L PD Y+
Sbjct: 507 ALKLWD---EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES-GLLPDETTYN 562
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L R+ ++ H K + +PD+ N +L
Sbjct: 563 TI---------------LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEG 607
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ +F G TY + + + G+ D +M + TY
Sbjct: 608 VLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYN 667
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRG 414
++ A + G+I EA + M ++G
Sbjct: 668 AIITALTDSGRIREAEEFMSKMLEKG 693
>gi|115452873|ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
gi|108708021|gb|ABF95816.1| expressed protein [Oryza sativa Japonica Group]
gi|113548508|dbj|BAF11951.1| Os03g0336000 [Oryza sativa Japonica Group]
gi|125543773|gb|EAY89912.1| hypothetical protein OsI_11461 [Oryza sativa Indica Group]
gi|215712300|dbj|BAG94427.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 545
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 151/357 (42%), Gaps = 23/357 (6%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN +L+A + +F+ LR +G+ P A +Y A++ + + G D E +M
Sbjct: 131 YNDILSALAMAGDHDSAVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMV 190
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G T+ +V + G++ A+ M G T Y L LC GR +
Sbjct: 191 ARGFRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLE 250
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAM 495
+A+ ++ K+K P TFT ++ G D+ IF +++ P I T NA+
Sbjct: 251 EALDLLNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNAL 310
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS----SMLEASATAH 551
L + + KA L E + G+ A PD ++S ++L A T+
Sbjct: 311 LNGHCKEGNPLKAYSLLME-----------MCGNAA-CPPDRISFSIVLQALLRAGETSA 358
Query: 552 QWEYFEYVYK-GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
W+ ++ + + G G LD A+ F L+ +G P+ +
Sbjct: 359 AWQAYKRMERAGFEADGRALDTLARGLCRQCAANVAALADAREVFGKLVASGH--EPVSY 416
Query: 611 TEMLI-QAIVQSN-YEKAVALINAMAYAPFHITERQWTELFESNEDRI-SRDKLEKL 664
T L+ QA+ + + AV+L+ MA + + +R +T++ + +R +RD L L
Sbjct: 417 TYCLMAQALARGGEVDAAVSLLGEMARRGYALRKRAYTDVVRALCERGRARDALRVL 473
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 127/324 (39%), Gaps = 30/324 (9%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M G T ++ L +G +AM V D + + + +++ Y L+ L
Sbjct: 189 MVARGFRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRT---YNSLIGGLCY 245
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI-ERMRQKPSKRI- 298
GR EAL + N + E PDI + V +VG E + + +R S I
Sbjct: 246 VGRLEEALDLLNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIF 305
Query: 299 -----KNMHRKNWDPV--------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
N H K +P+ PD + ++ VL A + + + + +K+
Sbjct: 306 TYNALLNGHCKEGNPLKAYSLLMEMCGNAACPPDRISFSIVLQALLRAGETSAAWQAYKR 365
Query: 340 LRKSGLKPSAATY-----GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+ ++G + GL + E F K+ SG + TY ++ +A
Sbjct: 366 MERAGFEADGRALDTLARGLCRQCAANVAALADAREVFGKLVASGHEPVSYTYCLMAQAL 425
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
G+++ AV+ + M +RG Y ++ LC GR +DA+ V+ + + R P
Sbjct: 426 ARGGEVDAAVSLLGEMARRGYALRKRAYTDVVRALCERGRARDALRVLALVIA-RDFVPG 484
Query: 455 EITFTGLIISSMDGGHIDDCISIF 478
F L+ G D ++++
Sbjct: 485 RNAFDALLGELARQGRWPDAMAVY 508
>gi|299471432|emb|CBN79384.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 145/347 (41%), Gaps = 30/347 (8%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L L+K G +G+WR+ +++ + G + ++ ++Y +A + + GRP EA + +
Sbjct: 26 LHLIKAAGFRGNWREVAALVSEMGGKGVEGNV---YIYNTAIAAMARCGRPREAEALLTV 82
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS------------KRIKNM 301
MLE ++ PD +Y+S + G L +L+ RM + S + N
Sbjct: 83 MLERDSIAPDTISYNSAINGHARCGDLDAARRLLGRMTELASGGALLHPDQFTYNAVANA 142
Query: 302 HRKNWDPV-------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
K D V + P+++ YN+ L AC + + + +R+ G+ P
Sbjct: 143 AAKRGDAVAAAEVLKMMAEAGVTPNIITYNSCLAACKAKGDLRRAVVLLEIMREDGIDPD 202
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+Y A+ G ++ V F M + +T+ ++A + G+ + A + +
Sbjct: 203 QRSYSAAIATAGIRGLWEEVQGFLETMREEDLTPDTVTFNTAIKAVADNGQCDVAFSLLA 262
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M+ G+ Y + N G W+ A+ ++E ++ P ++ + +
Sbjct: 263 EMKNEGLTPDQISYNGVLGACGNAGEWKAALRLLEDMRQA-GVTPNAYNYSAAMDACGKA 321
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G + +++ HM K + NA + S ++ A +L +E
Sbjct: 322 GRQREALALLGHMRKAGVRADTACYNAAIDACSVAMDWTAAVQLLQE 368
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 147/353 (41%), Gaps = 38/353 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ Y LL L K R A ++ M + C PD +Y +V ++ ++G ++E +L
Sbjct: 179 YTYNMLLKALCKNDRVDAARKLLAEMSYKGC--IPDAVSYTTVVSSMCRLGKVEEAREL- 235
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
S RIK+ + VYNA++N H+ + VF +F ++ G+ P
Sbjct: 236 -------SMRIKSF------------VPVYNALINGFCREHKMEEVFELFNEMAVEGIDP 276
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + + + G ++ KM G + T+ L++ ++ G++ EA+
Sbjct: 277 DVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLW 336
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M Q G Y L LC+ G+ +A+ V +K++ P E T++ LI
Sbjct: 337 NRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMER-NGVFPNETTYSTLIDGFAK 395
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G + I+ M + C PN+ M+ V RN MF+ A L E N
Sbjct: 396 AGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCP----- 450
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
P+ T+++ ++ + + E+ V M GC + T + +L
Sbjct: 451 --------PNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVL 495
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 152/330 (46%), Gaps = 30/330 (9%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P + +YN VL+A + ++++ + ++ +++ G++ + TY + ++ + ++ + D +
Sbjct: 140 KPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARK 199
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+M+ G A++Y +V + GK+ EA R + R + VY L C
Sbjct: 200 LLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA----RELSMR-IKSFVPVYNALINGFC 254
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
+ ++ + ++ ++ P IT++ +I + + G+++ +++ M C PN+
Sbjct: 255 REHKMEEVFELFNEM-AVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNV 313
Query: 490 GTVNAMLKVYSRNDMFSKAKEL----FEETTRANSSGY-TFLSGDGAPLKPDEYTYSSML 544
T +++K Y +A +L +E + N+ Y T + G +Y M+
Sbjct: 314 HTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHG--------LCSYGKMV 365
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
EA + + + E +G ++T ++ L+ ++AG ++ ++ G +
Sbjct: 366 EAVSVSQKMER----------NGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL 415
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
P+ + +T M+ S + A+ LI MA
Sbjct: 416 PNVVVYTCMVDVLCRNSMFNHALHLIENMA 445
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/323 (18%), Positives = 137/323 (42%), Gaps = 27/323 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ L + G+ A++VL ++ ++ + +T L+ GR EAL ++N M+
Sbjct: 284 VINTLSEMGNVEMALAVLAKMFLRGCSPNVHT---FTSLMKGYFMGGRLCEALDLWNRMI 340
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN-- 305
++ + P+ AY+++ L G + E V + ++M + S I +
Sbjct: 341 QEGS-EPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDL 399
Query: 306 ------WDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
W+ ++ P++VVY +++ + + + + + P+ T+
Sbjct: 400 VGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTF 459
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + SGK + + +M + G A TY ++ + + EA+ V +E+ +
Sbjct: 460 IKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEI 519
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
Y + C+ G ++ A+ + K+ + +KP IT+ +I + G + I
Sbjct: 520 KSNLVTYNTILSGFCHAGMFKGALQIAGKLL-VGGTKPDSITYNTVIYAYCKQGEVKTAI 578
Query: 476 SIFQHMKDHCE--PNIGTVNAML 496
+ + E P++ T ++L
Sbjct: 579 QLVDRLTKKGEGYPDVFTYTSLL 601
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 149/396 (37%), Gaps = 38/396 (9%)
Query: 240 KAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
+AG +AL+ F + E C P + Y+ V L L E Q +
Sbjct: 120 RAGLAEQALKTFYRIGEFGCK--PSVKIYNHVLDAL-----------LSENKFQMINGIY 166
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
NM R +E ++ YN +L A + + + ++ G P A +Y +
Sbjct: 167 NNMKRDG----IELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSS 222
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
M + GK + E ++ KS + Y L+ F E K+ E M G+
Sbjct: 223 MCRLGKVEEARELSMRI-KSFVPV----YNALINGFCREHKMEEVFELFNEMAVEGIDPD 277
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y + L G + A+ V+ K+ LR P TFT L+ GG + + + ++
Sbjct: 278 VITYSTVINTLSEMGNVEMALAVLAKM-FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLW 336
Query: 479 QHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
M ++ EPN N ++ + K E + + +G + P+E
Sbjct: 337 NRMIQEGSEPNTVAYNTLIHGLCS---YGKMVEAVSVSQKMERNG----------VFPNE 383
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
TYS++++ A A ++ M +GC + + ++ R + H ++
Sbjct: 384 TTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIEN 443
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ P+ + F + E A+ ++N M
Sbjct: 444 MANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQM 479
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 124/320 (38%), Gaps = 31/320 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRD--LKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL G +A+SV K +R+ + Y+ L+ KAG A I+N
Sbjct: 354 LIHGLCSYGKMVEAVSVSQ-----KMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNK 408
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M+ + L P++ Y + L + + + LIE NM N P+
Sbjct: 409 MITNGCL-PNVVVYTCMVDVLCRNSMFNHALHLIE-----------NMANGNC----PPN 452
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ +N + S + + V Q+R+ G P+ TY ++ + + + +
Sbjct: 453 TITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVG 512
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
++ + +TY ++ F G A+ + G + Y + C G
Sbjct: 513 EIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQG 572
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGT 491
+ A+ +V+++ P T+T L+ + +D+ + M + C PN T
Sbjct: 573 EVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGIC-PNRAT 631
Query: 492 VNAMLKVYSRNDMFSKAKEL 511
NA+++ +FSK L
Sbjct: 632 WNALVR-----GLFSKLGHL 646
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 163/412 (39%), Gaps = 36/412 (8%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D+ T L+ ++G+ +A RI + LE+ PD+ Y+ + + G + +
Sbjct: 138 DIPDVIACTSLIRGFCRSGKTRKATRIMEI-LENSGAVPDVITYNVLIGGYCKSGEIDKA 196
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
++++ERM + PD+V YN +L + S + K V + +
Sbjct: 197 LQVLERMS------------------VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQR 238
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
P TY + +E + +M K G +TY VL+ +EG+++EA
Sbjct: 239 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 298
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLI 462
+ + NM G + + +C+ GRW DA L+ + ++ + P +TF LI
Sbjct: 299 IKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLR--KGCSPSVVTFNILI 356
Query: 463 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
+ I + + M H C PN + N +L + + +A E E
Sbjct: 357 NFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLE-------- 408
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
+ G PD TY+++L A + + + ++ GC + ++
Sbjct: 409 ---IMVSRGC--YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDG 463
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ GK + + G P + ++ +L + ++A+ + + M
Sbjct: 464 LTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDM 515
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 162/391 (41%), Gaps = 46/391 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L+ L D G ++AM VLD + D+ YT L+ +A+++ + M
Sbjct: 215 ILRSLCDSGKLKEAMEVLDRQMQRECYPDV---ITYTILIEATCNDSGVGQAMKLLDEMR 271
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV--LEPD 313
+ PD+ Y+ + + + G L E +K + M P+ +P+
Sbjct: 272 KK-GCKPDVVTYNVLINGICKEGRLDEAIKFLNNM-----------------PLYGCQPN 313
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
++ +N +L + + +W + + + G PS T+ + + + + +
Sbjct: 314 VITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 373
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
KM K G +L+Y L+ F +E K++ A+ + M RG Y L LC +G
Sbjct: 374 KMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 433
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 492
+ A+ ++ ++ S + P+ IT+ +I G + + + M + +P+I T
Sbjct: 434 KADAAVEILNQLSS-KGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITY 492
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML----EASA 548
+ +L+ +A ++F + +G +KP TY++++ +A
Sbjct: 493 STLLRGLGCEGKVDEAIKIFHDM-------------EGLSIKPSAVTYNAIMLGLCKAQQ 539
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
T+ ++ Y M GC+ + + L+
Sbjct: 540 TSRAIDFLAY----MVEKGCKPTKATYTILI 566
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 131/344 (38%), Gaps = 37/344 (10%)
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
++++G+ + +F +M G+ + L+R F GK +A + +E G V
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y L C +G A+ V+E++ P +T+ ++ S D G + + + +
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERMS----VAPDVVTYNTILRSLCDSGKLKEAMEVL 232
Query: 479 -QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
+ M+ C P++ T +++ + +A +L +E + KPD
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC-------------KPDV 279
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
TY+ ++ + + M L GCQ + H +L G+ E
Sbjct: 280 VTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLAD 339
Query: 598 LLEAGEIPHPLFFT---------EMLIQAI-VQSNYEKAVALINAMAYAPF---HITERQ 644
+L G P + F +L +AI V K + N+++Y P E++
Sbjct: 340 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKK 399
Query: 645 WTELFESNEDRISRD------KLEKLLNALCNCNAASSEITVSN 682
E E +SR LL ALC A + + + N
Sbjct: 400 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILN 443
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 21/238 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L++ L + + + + M + G M LL G + +A+ L+ +
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVG 278
D+ Y LL L K G+ A+ I N L + C+ P + Y++V L +VG
Sbjct: 414 GCYPDI---VTYNTLLTALCKDGKADAAVEILNQLSSKGCS--PVLITYNTVIDGLTKVG 468
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ +L+E MR+K L+PD++ Y+ +L + +F
Sbjct: 469 KTEYAAELLEEMRRKG---------------LKPDIITYSTLLRGLGCEGKVDEAIKIFH 513
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
+ +KPSA TY M + ++ + +F M + G TY +L+ +
Sbjct: 514 DMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 182/446 (40%), Gaps = 44/446 (9%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFV-- 230
+F R M + T + +L GL +G ++D V G+K + F+
Sbjct: 210 LRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEG 269
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y K L + G A I LM E + ++ Y + +G ++E +L E M
Sbjct: 270 YFKRLDLGGVA-------EILTLM-EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 321
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R+K +E D+ VY ++++ S K +F ++ GL PSA
Sbjct: 322 REKG---------------IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAH 366
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYG + + ++G+ + +M G + + + L+ + E G ++EA+ M
Sbjct: 367 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 426
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
E++G+ Y +A LC R +A L+ ++ R P ++FT LI G
Sbjct: 427 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVE--RGVSPNTMSFTTLIDIYCKEG 484
Query: 470 HIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ + +F+ M++ PNI T N ++ YS+ +A +L +E
Sbjct: 485 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL------------- 531
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ L PD YT +S++ + + ++ M G + + ++ S+ G+
Sbjct: 532 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 591
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEML 614
+D + E G P ++ ++
Sbjct: 592 EEAFKLYDEMKETGLTPDDTVYSSLV 617
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 171/400 (42%), Gaps = 50/400 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL +G +AM LD++ + + + +T ++ L K G+ A+ M+
Sbjct: 180 LINGLCIEGRIVEAMEQLDYIM---SRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMV 236
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E DC P++ +Y + +L + L+ E V L MR + P +
Sbjct: 237 ELDCE--PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIG---------------ISPTV 279
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN+++ S QWK +FK++ + +KP T+ + ++ + + G F K
Sbjct: 280 VTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGK 339
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV---VGTASVYYELACCLCN 431
M + +TY L+ + E+ + M R + V T S++ ++ C
Sbjct: 340 MIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDV---FCK 396
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHMKDH-CE 486
G +A ++ + R +P +T+ L MDG +D+ +F M + C
Sbjct: 397 KGMVSEAQSIINLMIE-RGLRPNVVTYNSL----MDGYCLHSQMDEARKVFDIMVNKGCA 451
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ + N ++K Y +++ +AK+LF+E + L P+ T+++++
Sbjct: 452 PDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG-------------LTPNSITHTTLISG 498
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
A + + ++K M GC D ++ LL + G
Sbjct: 499 LCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHG 538
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 152/361 (42%), Gaps = 23/361 (6%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
E + +++D L + + + M G+ T L+ G+ + G W+QA +
Sbjct: 243 EVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILF 302
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ K D+ + ++ L+ L K G EAL +F M++ + PDI Y S+
Sbjct: 303 KEMLEWNMKPDVVT---FSILVDALCKEGVVLEALSVFGKMIQ-IAMEPDIVTYSSLIHG 358
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
+ + L KE L+ M + + PD+V ++ ++
Sbjct: 359 VCKSSLWKESSTLLNEMLSRN---------------IRPDVVTFSIWVDVFCKKGMVSEA 403
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ + + GL+P+ TY M+ + D + F M G A L+Y +L++
Sbjct: 404 QSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKG 463
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ + +I+EA M +G+ + + L LC GR A + +K+ S H P
Sbjct: 464 YCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGS--HGCP 521
Query: 454 LE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
+ IT++ L+ GH+D+ +++F+ + K +PN +L + AKEL
Sbjct: 522 PDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKEL 581
Query: 512 F 512
F
Sbjct: 582 F 582
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 144/324 (44%), Gaps = 15/324 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EP++V Y+ ++++ + +F +R G+ P+ TY + M SG++
Sbjct: 241 EPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASI 300
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F++M + +T+ +LV A +EG + EA++ M Q + Y L +C
Sbjct: 301 LFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVC 360
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
+ W+++ ++ ++ S R+ +P +TF+ + G + + SI M + PN+
Sbjct: 361 KSSLWKESSTLLNEMLS-RNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNV 419
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N+++ Y + +A+++F+ + PD +Y+ +++
Sbjct: 420 VTYNSLMDGYCLHSQMDEARKVFDIMVNKGCA-------------PDVLSYNILIKGYCK 466
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + + + ++ M+ G + H L+ +AG+ + + F + G P +
Sbjct: 467 SERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLIT 526
Query: 610 FTEMLIQAIVQSNYEKAVALINAM 633
++ +L + ++A+AL A+
Sbjct: 527 YSTLLSGFCKHGHLDEALALFEAL 550
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 141/336 (41%), Gaps = 25/336 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+P ++ +N ++N + + G +P+ T+ + + + + GK
Sbjct: 170 FKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAI 229
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ +KM + ++Y +++ + + +NEAV +M G+ T Y L +
Sbjct: 230 VWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGM 289
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
CN+G+W+ A ++ +++ + KP +TF+ L+ + G + + +S+F M + EP+
Sbjct: 290 CNSGQWKQASILFKEMLEW-NMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPD 348
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTF------LSGDGA--------- 531
I T ++++ ++ ++ ++ L E N TF G
Sbjct: 349 IVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIIN 408
Query: 532 -----PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
L+P+ TY+S+++ Q + V+ M GC D + L+ ++
Sbjct: 409 LMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSE 468
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ + FD + G P+ + T LI + Q+
Sbjct: 469 RIDEAKQLFDEMSHKGLTPNSITHTT-LISGLCQAG 503
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 103/236 (43%), Gaps = 15/236 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P + +N +L A V + V +++++ G+ S T + + + L
Sbjct: 102 PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSV 161
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G +T+ L+ EG+I EA+ + + RG T + + LC
Sbjct: 162 LGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCK 221
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 490
G+ A++ ++K+ L +P ++++ +I S +++ + +F HM+ P +
Sbjct: 222 IGKTSAAIVWMKKMVEL-DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVV 280
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
T N+++ + + +A LF+E N +KPD T+S +++A
Sbjct: 281 TYNSLIYGMCNSGQWKQASILFKEMLEWN-------------MKPDVVTFSILVDA 323
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/317 (18%), Positives = 120/317 (37%), Gaps = 18/317 (5%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F Q+ P + + +++ YD V +RKM G + T +L+
Sbjct: 92 FNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCH 151
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
+ + + + + G + + L LC GR +AM ++ I S R +P
Sbjct: 152 LHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS-RGYQPTVY 210
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T T ++ G I + M + CEP + + + ++ +N + ++A +LF
Sbjct: 211 THTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHM 270
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
S P TY+S++ + QW+ ++K M + D
Sbjct: 271 RSIGIS-------------PTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTF 317
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA- 634
+ L+ + G F +++ P + ++ ++ S ++++ L+N M
Sbjct: 318 SILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLS 377
Query: 635 --YAPFHITERQWTELF 649
P +T W ++F
Sbjct: 378 RNIRPDVVTFSIWVDVF 394
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 165/412 (40%), Gaps = 42/412 (10%)
Query: 173 KNWKFVRIMNQSGLM---FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF 229
K WK + +M + GL + G ++ LL + +A S + + L
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS------EMIRQGILPDTV 352
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VYT L+ K G A + F M ++ PD+ Y ++ Q+G + E KL
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K LEPD V + ++N + K F V + ++G P+
Sbjct: 412 MFCKG---------------LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY ++ + + G D +E +M K G TY +V + G I EAV V
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
E G+ Y L C +G A +++++ + +P +TF L+ G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHG 575
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS-RNDMFSKAKELFEETTRANSSGYTFLS 527
++D + M PN T N+++K Y RN++ +A ++ Y +
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL------------KAATAIYKDMC 623
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
G + PD TY ++++ A + ++++ M G + + ++ L+
Sbjct: 624 SRG--VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 169/463 (36%), Gaps = 74/463 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLML--------EDCNLYP------------------- 262
V+ +L G EA R+F ML + CN+Y
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 263 --------DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
++A+Y+ V + Q+G +KE L+ M K PD+
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG---------------YTPDV 281
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ Y+ V+N + V+ + + +++ GLKP++ YG + ++ + K E F +
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G + Y L+ F + G I A M R + Y + C G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
+A + ++ + +P +TFT LI GH+ D + HM + C PN+ T
Sbjct: 402 MVEAGKLFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTF--------------------LSG--DGA 531
++ + A EL E + F L G + A
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L D TY+++++A + + + + + K M G Q L+ G
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
E + +L G P+ F ++ Q +++N + A A+ M
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/423 (18%), Positives = 160/423 (37%), Gaps = 35/423 (8%)
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV-VYNAVLNACVPSHQWK 331
L GLL+E ++ E+M N+ VL D VY L+ ++
Sbjct: 184 VLVDFGLLREARRVFEKML-------------NYGLVLSVDSCNVYLTRLSK--DCYKTA 228
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
VF++ + G+ + A+Y + + + Q G+ H M G ++Y +V
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ G++++ + M+++G+ + +Y + LC + +A ++ +R
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM--IRQG 346
Query: 452 K-PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
P + +T LI G I F M P++ T A++ + + +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+LF E F G L+PD T++ ++ A + V+ M +GC
Sbjct: 407 KLFHE---------MFCKG----LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
+ + L+ + G + + G P+ + ++ N E+AV L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 630 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA--L 687
+ A + +T L ++ DK +++L + + +T + L L
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 688 HAL 690
H +
Sbjct: 574 HGM 576
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 16/192 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K+G +A I ML L P I ++ + G+L++ KL+ M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K + P+ +N+++ + K ++K + G+ P
Sbjct: 588 LAKG---------------IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ ++ F++M G ++ TY VL++ F + K EA M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 411 EQRGVVGTASVY 422
+ G+ ++
Sbjct: 693 RREGLAADKEIF 704
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 153/373 (41%), Gaps = 37/373 (9%)
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
+L KA R EA+ +F LE P AY+++ + G G E L+ER + K S
Sbjct: 64 VLCKANRLDEAVELFE-QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI 122
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
P ++ YN +L + + +F+++++ + P+ TY + +
Sbjct: 123 ---------------PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILI 166
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+++ + GK + E M ++G LT +++ + K+ EA + M+ +
Sbjct: 167 DMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCT 226
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
A + L L GR DA + EK+ H P I +T LI S G +D
Sbjct: 227 PNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV-PGAIVYTSLIRSFFKCGRKEDGHK 285
Query: 477 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
I++ M C P++ +N + + K + LF E N+ G+ P
Sbjct: 286 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI---NAHGFI----------P 332
Query: 536 DEYTYSSMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
D +YS ++ A E +E Y M GC LD + ++ ++GK + A
Sbjct: 333 DARSYSILIHGLVKAGLANETYELFY-AMKEQGCVLDTHAYNAVIDGFCKSGK---VNKA 388
Query: 595 FDSLLEAGEIPHP 607
+ L E HP
Sbjct: 389 YQLLEEMKVKGHP 401
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 167/408 (40%), Gaps = 34/408 (8%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A S+ + G+ DK + ++ L+ LGK GR +A ++ ML DC P Y
Sbjct: 212 EACSIFE---GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML-DCGHVPGAIVY 267
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
S+ + + G R++ +I +++ PDL + N ++ +
Sbjct: 268 TSLIRSFFKCG------------RKEDGHKI---YKEMVHTGCSPDLTLINTYMDCVFKA 312
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + +F+++ G P A +Y + + ++++G + +E F M + G + Y
Sbjct: 313 GETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAY 372
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
++ F + GK+N+A + M+ +G T Y + L R +A ++ E+ KS
Sbjct: 373 NAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 432
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFS 506
K + ++ LI G ID+ I + M+ PN+ T N +L D
Sbjct: 433 -NGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL------DALV 485
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
KA+E+ N + F S P++ TYS ++ ++ ++ M
Sbjct: 486 KAEEI-------NEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 538
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
G + + + ++ ++AG F G IP + M+
Sbjct: 539 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 586
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/505 (20%), Positives = 199/505 (39%), Gaps = 81/505 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A +L+ K K + S Y +L LGK R EALRIF M
Sbjct: 96 MIMGYGSAGKFDEAYGLLERQ---KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 152
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P++ Y+ + L + G L +++ + M + L P+++
Sbjct: 153 RDA--VPNVPTYNILIDMLCREGKLNAALEIRDDMERAG---------------LFPNVL 195
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ + + + +F+ + P+A T+ ++ + + G+ D + + KM
Sbjct: 196 TVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKM 255
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G GA+ Y L+R+F++ G+ + + M G ++ C+ G
Sbjct: 256 LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGET 315
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+ + +I + P +++ LI + G ++ +F MK+ C + NA
Sbjct: 316 EKGRALFREINA-HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNA 374
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + ++ +KA +L EE + G P P TY S+++ A
Sbjct: 375 VIDGFCKSGKVNKAYQLLEE-----------MKVKGHP--PTVVTYGSVIDGLA------ 415
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEIPHPLFF 610
++D+ A++L E +++ L + SL++ G I
Sbjct: 416 --------------KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLI 461
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 670
E L+Q + N L++A+ A E NE I ++ L
Sbjct: 462 MEELMQKGLTPNVYTWNCLLDALVKAE------------EINEALICFQSMKDL------ 503
Query: 671 CNAASSEITVSNLSRALHALCRSEK 695
++IT S L ++ LCR K
Sbjct: 504 -KCPPNQITYSIL---INGLCRVRK 524
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/301 (16%), Positives = 115/301 (38%), Gaps = 59/301 (19%)
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME----------VMLQSGKYDLVHEFFR 373
CV S + + F + + +RK +P+ + Y + + V+ ++ + D E F
Sbjct: 20 CVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFE 79
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
++ ++ + A Y ++ + GK +EA + + +G + + Y + CL
Sbjct: 80 QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKR 139
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 493
R ++A+ + F+ MK PN+ T N
Sbjct: 140 RVEEALRI------------------------------------FEEMKRDAVPNVPTYN 163
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
++ + R + A E+ ++ RA L P+ T + M++ A +
Sbjct: 164 ILIDMLCREGKLNAALEIRDDMERAG-------------LFPNVLTVNIMIDRLCKAQKL 210
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
E +++GM C + + L+ + G+ ++ +L+ G +P + +T +
Sbjct: 211 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 270
Query: 614 L 614
+
Sbjct: 271 I 271
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 119/293 (40%), Gaps = 19/293 (6%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A + +L+ L + + + ++ M + G + ++ G G +A +L
Sbjct: 333 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 392
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ +K K + Y ++ L K R EA +F + + ++ Y S+
Sbjct: 393 EE---MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN-GIKLNVVVYSSLIDG 448
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
G+VG + E ++E + QK L P++ +N +L+A V + +
Sbjct: 449 FGKVGRIDEAYLIMEELMQKG---------------LTPNVYTWNCLLDALVKAEEINEA 493
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F+ ++ P+ TY + + + + K++ F+++M K G +TY ++
Sbjct: 494 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 553
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
+ G I EA + G + ++ Y + L + + DA + E+ +
Sbjct: 554 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 606
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 154/373 (41%), Gaps = 38/373 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + + K F +++ + + G + S A++ + M + + K +
Sbjct: 21 VSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREGSR-SVASFNIMMRGLFDNRKVEEAM 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KSG ++TY +LV F + G IN+++ + EQ+G V A Y + L
Sbjct: 80 SIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAYSAMINAL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
C + + A+ V+ I+S KP + LI + DD + IF+ M C P
Sbjct: 140 CKESKLEKAVSVLNGMIRS--GCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
NI T + ++ + + F +A +L +E L P TYS +++
Sbjct: 198 NIATYSILIDGLCKGERFGEAYDLVKEMLEKG-------------LNPSVITYSLLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
H+ E ++ + G + D H L+ GK L + + P+
Sbjct: 245 CLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPN- 303
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF--ESNEDRISRDKLEKLL 665
++ Q + + K + NA+ W + E D IS + L
Sbjct: 304 -----LVTQNTLMEGFYKDGNVRNALVI---------WARILKNELQPDIISYN---ITL 346
Query: 666 NALCNCNAASSEI 678
LC+CN S I
Sbjct: 347 KGLCSCNRISDAI 359
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 179/425 (42%), Gaps = 33/425 (7%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
+N++++ + ++P L+ +N ++N + + + Q+ + L P TY +
Sbjct: 225 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 284
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
++ DL F +M K G ++TY L+ EG+++EA+ + M ++G+ T
Sbjct: 285 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPT 344
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y LC ++A+ +V ++K R +P T+T LI G ++ I ++
Sbjct: 345 VYTYTLPITALCAIEHEEEAIELVARMKK-RGCRPNVQTYTALISGLSRLGKLEVAIGLY 403
Query: 479 QHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYT------FLS 527
M K+ PN T NA++ FS A ++F + AN+ Y L
Sbjct: 404 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 463
Query: 528 GD-------------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
GD PL P TY++++ T + M +GC+ D+
Sbjct: 464 GDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 522
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ L+ S+ GK F ++E G P+P+ +T ++ + A++L+ M
Sbjct: 523 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME 582
Query: 635 YAPFHITERQWTELFE--SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
+ + + S E+R S + EK+ + + + IT + L + LCR
Sbjct: 583 EMGCNPNVESYNAVINGLSKENRFS--EAEKICDKMAEQGLLPNVITYTTL---IDGLCR 637
Query: 693 SEKER 697
+ + +
Sbjct: 638 NGRTQ 642
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 110/542 (20%), Positives = 214/542 (39%), Gaps = 47/542 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L G + A+ + W+ G L + Y +++ L G +A+ +F ML
Sbjct: 421 LINELCVGGRFSTALKIFHWMEG---HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 477
Query: 256 EDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKRIKN------------ 300
+ L P + Y+++ +T G V L+ L++ +P + N
Sbjct: 478 KMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 536
Query: 301 -----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
++ + L P+ V Y +++ + + +++ + G P+ +Y
Sbjct: 537 ESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAV 596
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + + ++ + KMA+ G +TY L+ G+ A +ME+R
Sbjct: 597 INGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 656
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ Y L LC G+ +A +++++++ + P E+TFT LI + G ID
Sbjct: 657 LPNLYTYSSLIYGLCQEGKADEAEILLKEMER-KGLAPDEVTFTSLIDGFVVLGRIDHAF 715
Query: 476 SIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAK------ELFEETTRANSSGYTFLSG 528
+ + M D C+PN T + +LK + + + K ++ + + +S
Sbjct: 716 LLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSN 775
Query: 529 DGAPL-----KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
A + +P TYS+++ ++ E + K M G D+ + LL+
Sbjct: 776 LLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI--- 832
Query: 584 RAGKCHLLE--HA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
C LE HA F S+ G H + ++ E+A AL + M +
Sbjct: 833 --AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEW 890
Query: 639 HITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
+ E WT L + D KLL+ + + N + T L R L + +S +
Sbjct: 891 NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEP 950
Query: 699 LS 700
L+
Sbjct: 951 LA 952
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 179/425 (42%), Gaps = 33/425 (7%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
+N++++ + ++P L+ +N ++N + + + Q+ + L P TY +
Sbjct: 183 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
++ DL F +M K G ++TY L+ EG+++EA+ + M ++G+ T
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPT 302
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y LC ++A+ +V ++K R +P T+T LI G ++ I ++
Sbjct: 303 VYTYTLPITALCAIEHEEEAIELVARMKK-RGCRPNVQTYTALISGLSRLGKLEVAIGLY 361
Query: 479 QHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYT------FLS 527
M K+ PN T NA++ FS A ++F + AN+ Y L
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421
Query: 528 GD-------------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
GD PL P TY++++ T + M +GC+ D+
Sbjct: 422 GDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ L+ S+ GK F ++E G P+P+ +T ++ + A++L+ M
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540
Query: 635 YAPFHITERQWTELFE--SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
+ + + S E+R S + EK+ + + + IT + L + LCR
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFS--EAEKICDKMVEQGLLPNVITYTTL---IDGLCR 595
Query: 693 SEKER 697
+ + +
Sbjct: 596 NGRTQ 600
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 182/448 (40%), Gaps = 42/448 (9%)
Query: 213 LDWVYGLKDKRDLK-----SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
LD +G+ D R +K + Y+ L+ L GR EAL + M+E + P + Y
Sbjct: 249 LDLAFGVFD-RMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-GIEPTVYTY 306
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSK--------------RIK------NMHRKNWD 307
L + +E ++L+ RM+++ + R+ ++ K
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
L P+ V YNA++N ++ +F + G + TY ++ + G +
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
F KM K G +TY L+ + +G +N A + M++ G Y EL
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
G+ + A +++ + P +++T LI G +D +S+ + M++ C
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLN-PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN 545
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ + NA++ S+ + FS+A+++ ++ L P+ TY+++++
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQG-------------LLPNVITYTTLIDG 592
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ ++ ++ M C + ++ L+ + GK E + G P
Sbjct: 593 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 652
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ FT ++ +V + A L+ M
Sbjct: 653 EVTFTSLIDGFVVLGRIDHAFLLLRRMV 680
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 134/337 (39%), Gaps = 54/337 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L G + A+ + W+ G L + Y +++ L G +A+ +F ML
Sbjct: 379 LINELCVGGRFSTALKIFHWMEG---HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L P + Y+++ G + +L++ M++ EPD
Sbjct: 436 KMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC---------------EPDEW 479
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +++ + + + F+++ + GL P+ +Y ++ + GK D+ ++M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +Y ++ +E + +EA M ++G++ Y L LC NGR
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599
Query: 436 QDAMLV---VEKIKSL-------------------------------RHSKPLEITFTGL 461
Q A + +EK K L + P E+TFT L
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659
Query: 462 IISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
I + G ID + + M D C+PN T + +LK
Sbjct: 660 IDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLK 696
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/482 (18%), Positives = 197/482 (40%), Gaps = 44/482 (9%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL 186
+D ++ + +F +W ++R + ++ L+ L E M + WK ++ M +S
Sbjct: 100 IDVEIHVKIQFF----KWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTC 155
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
+ + +++K LG +A+S+ Y +K ++ + Y ++ +L + G +
Sbjct: 156 VIGPADLSEIVKVLGKAKMVNKALSIF---YQIKGRKCKPTSNTYNSMILMLMQEGHHEK 212
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN--- 300
++N M + + PD Y ++ G++G + L + M++ P+ +I
Sbjct: 213 VHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTIL 272
Query: 301 -----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV---------FWVFKQLRKSGLK 346
+ R L ++ L + KGV + +F + K G K
Sbjct: 273 GIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCK 332
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVA 405
P + ++ ++G+ + F +M +TY +++A +E + + +EA
Sbjct: 333 PDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFL 392
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
M++ GVV ++ Y L C R + A+L++E++ + P + LI +
Sbjct: 393 WYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDE-KGFAPCPAAYCSLINAL 451
Query: 466 MDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ +FQ ++++C + V A M+K + S+A +LF E + +
Sbjct: 452 GKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCN--- 508
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
PD Y Y++++ + + + M +GC D H +L +R
Sbjct: 509 ----------PDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFAR 558
Query: 585 AG 586
G
Sbjct: 559 TG 560
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 159/360 (44%), Gaps = 45/360 (12%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVA 271
L V +K+K + + YT+L+ +GKAG+ EA IF N++ E C PD+ +++
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCK--PDVVLINNLI 342
Query: 272 VTLGQVGLLKELVKLIERMRQ---KPSKRIKNM------------------HRKNWDPVL 310
LG+ G L + +KL E M P+ N + K + +
Sbjct: 343 NLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGV 402
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P Y+ +++ +++ + + +++ + G P A Y + + ++ +Y+ +E
Sbjct: 403 VPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANE 462
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F+++ ++ A Y V+++ + G+++EAV M++ G Y L +
Sbjct: 463 LFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPL---EITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 486
G +A ++ ++ + L I G + G I+ +F MK+ +
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIE----MFTRMKNSKIK 578
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ + N +L SR MF +A +L +E NS G+ + D TYSS+LEA
Sbjct: 579 PDVVSYNTVLGCLSRAGMFEEAAKLMKEM---NSKGFEY----------DLITYSSILEA 625
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 24/244 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE---L 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVG 278
++ S VY ++ LGK GR EA+ +FN M + CN PD+ AY+++ + +VG
Sbjct: 468 RENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCN--PDVYAYNALMSGMVRVG 525
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E L+ M + PDL +N +LN + KG +F
Sbjct: 526 MTDEAHSLLRTMEENGCT---------------PDLNSHNIILNGFARTGGPKGAIEMFT 570
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+++ S +KP +Y + + ++G ++ + ++M G +TY ++ A G
Sbjct: 571 RMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV---G 627
Query: 399 KINE 402
KI+E
Sbjct: 628 KIDE 631
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 159/367 (43%), Gaps = 34/367 (9%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
++++ +LGKA ++AL IF ++ P Y+S+ + L Q G +++ +L M
Sbjct: 163 SEIVKVLGKAKMVNKALSIF-YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEM- 220
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
N L PD V Y+A++ A + +F +++++GL P+A
Sbjct: 221 ------------CNEGDCL-PDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKI 267
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + + + G+ + ++M + G A+ TY L++ + GK+ EA + NM
Sbjct: 268 YTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNML 327
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-GH 470
+ G + L L GR DA+ + E+++SL+ + P +T+ +I + +
Sbjct: 328 KEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCT-PNVVTYNTVIKALFESKAR 386
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ ++ MK++ P+ T + ++ + + + KA L EE D
Sbjct: 387 ASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM-------------D 433
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
P Y S++ A A ++E +++ + C + ++++ GKC
Sbjct: 434 EKGFAPCPAAYCSLINALGKAKRYEAANELFQELR-ENCGYSSARVYAVMIK--HLGKCG 490
Query: 590 LLEHAFD 596
L A D
Sbjct: 491 RLSEAVD 497
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 73/197 (37%), Gaps = 15/197 (7%)
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ LI + G + + Q M + C ++ ++KV + M +KA +F +
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG-CQLDQTK 574
G KP TY+SM+ E +Y M G C D
Sbjct: 186 -------------KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVT 232
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
++ L+ + G+ FD + E G P +T +L EKA+ L+ M
Sbjct: 233 YSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMK 292
Query: 635 YAPFHITERQWTELFES 651
+T +TEL +
Sbjct: 293 EKGCALTVYTYTELIKG 309
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 114/566 (20%), Positives = 217/566 (38%), Gaps = 87/566 (15%)
Query: 106 DNLKRENLREL----KEMFEKDLNWVLDD-------DVQLGSDYFAKNVEWHPEKRWRSE 154
D + E LRE+ KE+ K LN ++ +V L K+ + P + +
Sbjct: 187 DRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNA 246
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
+ + D+L ++ R M++ GL E + + L G WR+A+S+++
Sbjct: 247 LVQVFLRADKLDTAQLVH------REMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE 300
Query: 215 WVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
K D + + +Y K+++ L +A EA+ N M + P++ Y +
Sbjct: 301 -------KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM-RSTSCIPNVQTYRIL--- 349
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + + + KRI +M P ++N++++A S +
Sbjct: 350 ---------LCGCLNKKQLGRCKRILSMMIAEG---CYPSYTIFNSLVHAYCKSDDFSYA 397
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGK------YDLVHEFFRKMAKSGEAIGALTY 387
+ + K++ K KP Y + + + G+ ++L + + +M +G + +
Sbjct: 398 YKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNV 457
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
R GK +A + M G V S Y E+ LCN R ++A + +++K
Sbjct: 458 VSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKG 517
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 506
P T+T LI G I + M +D CEP + T ++ Y + S
Sbjct: 518 -TGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS 576
Query: 507 KAKELFEE-----------TTRANSSGYT---------------------------FLSG 528
A ELFE T A GY F
Sbjct: 577 VANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ KP+ TY ++++ AH+ + + + M + GC+ + + L+ +A K
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEML 614
+ F ++E G P+ ++ ++
Sbjct: 697 DEAQEVFHKMVERGYNPNVYTYSSLI 722
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 127/289 (43%), Gaps = 10/289 (3%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ KA + A +F LM+ +P++ Y ++ + G +++ ++ RM
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAK-GCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Query: 291 RQKPSKRIKNMHRKNWDPVLE-PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
R +M+ K + V E P++V Y A+++ +H+ K + + + G +P+
Sbjct: 621 RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNT 680
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ ++ K D E F KM + G TY L+ +++ +++ + +
Sbjct: 681 IVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSK 740
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDA---MLVVEKIKSLRHSKPLEITFTGLIISSM 466
M + +Y E+ L + +A ML++E+ + KP +T+T +I
Sbjct: 741 MLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE----KGCKPNVVTYTAMIDGFG 796
Query: 467 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G +D C+ +F+ M C PN T ++ +A L EE
Sbjct: 797 KAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 147/383 (38%), Gaps = 66/383 (17%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y+ V+ + + + F++FK+++ +G+ P TY + ++ ++G H +
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M + G +TY L+ A+ + K++ A M +G Y L C
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606
Query: 432 NGRWQDAMLVVE---------------KIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
+G + A + KIK+ KP +T+ L+ + D
Sbjct: 607 SGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARD 666
Query: 477 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ + M D CEPN +A++ + + +A+E+F + GY P
Sbjct: 667 LLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE---RGYN----------P 713
Query: 536 DEYTYSS--------------------MLEASATAHQWEYFEYV------------YKGM 563
+ YTYSS MLE S + Y E + YK M
Sbjct: 714 NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM 773
Query: 564 AL---SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
+ GC+ + + ++ +AGK F + G P+ + +T ++
Sbjct: 774 LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCAT 833
Query: 621 SNYEKAVALINAM--AYAPFHIT 641
+ ++A AL+ M Y P H++
Sbjct: 834 GHLDEAYALLEEMKQTYWPKHVS 856
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/423 (18%), Positives = 155/423 (36%), Gaps = 50/423 (11%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +G + + ++ + L G + +A V+ + G D + Y++++ L
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTST---YSEVIGFLCN 501
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
A R A +F M + + PD+ Y + + G++K+ ++ M +
Sbjct: 502 ASRVENAFFLFKEM-KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC----- 555
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
EP +V Y +++A + + + +F+ + G P+ TY ++
Sbjct: 556 ----------EPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 605
Query: 361 QSGKYDL----------------VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+SG + V +F+ E +TY LV + K+ +A
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ M G VY L C + +A V K+ R P T++ LI
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE-RGYNPNVYTYSSLIDR 724
Query: 465 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+D + + M ++ C PNI M+ S+ +K E ++ G
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK---VAKTDEAYKLMLMMEEKG- 780
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
KP+ TY++M++ A + + +++ M GC + + L+
Sbjct: 781 ---------CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCC 831
Query: 584 RAG 586
G
Sbjct: 832 ATG 834
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 99/245 (40%), Gaps = 51/245 (20%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT+++ L K + EA ++ LM+E+ P++ Y ++ G+ G + + ++L
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLM-LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFRE 810
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS----------HQWKGVFW---- 335
M K P+ V Y ++N C + + K +W
Sbjct: 811 MGSKGCA---------------PNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHV 855
Query: 336 -------------------VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+ +++ K+G P+ Y + ++ +++G+ ++ E +++
Sbjct: 856 SSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVI 915
Query: 377 KSGEAIGAL--TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ ++ A Y L+ +F KI+ A +M + GV+ + L L R
Sbjct: 916 SASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRR 975
Query: 435 WQDAM 439
W++A+
Sbjct: 976 WEEAL 980
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 152/367 (41%), Gaps = 27/367 (7%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L+ R+ + L+ G AG E++++F M + + P + ++S+ L
Sbjct: 136 LQDRY-FNSLIRSYGNAGLFQESVKLFQTM-KQMGISPSVLTFNSL------------LS 181
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
L++R R + + + R+ + + PD +N ++N + F +FK +
Sbjct: 182 ILLKRGRTGMAHDLFDEMRRTYG--VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYH 239
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI--GALTYKVLVRAFWEEGKINE 402
P TY ++ + ++GK + H M K + ++Y LVR + + +I+E
Sbjct: 240 CNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDE 299
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGL 461
AV +M RG+ A Y L L R+ + +++ + P TF L
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNIL 359
Query: 462 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
I + D GH+D + +FQ M + P+ + + +++ + F +A+ LF E
Sbjct: 360 IKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKE- 418
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
L D KP Y+ M E + + E V++ + G Q D + L+
Sbjct: 419 ---VLLGKDEC--KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLIT 472
Query: 581 EASRAGK 587
R GK
Sbjct: 473 GHCREGK 479
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/339 (18%), Positives = 127/339 (37%), Gaps = 34/339 (10%)
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
VP+ + WV G ++ L +E + ++ ++ F + +
Sbjct: 80 VPADGLRFFDWV----SNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVK 135
Query: 385 LT---YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
L + L+R++ G E+V + M+Q G+ + + L L GR A +
Sbjct: 136 LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL 195
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 500
++++ P TF LI +D+ IF+ M+ HC P++ T N ++
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 501 R-----------NDMFSKAKELFEETTRANS--SGY-----------TFLSGDGAPLKPD 536
R + M KA ++ + GY F LKP+
Sbjct: 256 RAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN 315
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGM--ALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
TY+++++ + AH+++ + + G A + D L+ AG
Sbjct: 316 AVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKV 375
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
F +L P ++ ++ +++ +++A L N +
Sbjct: 376 FQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 151/360 (41%), Gaps = 34/360 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L+ L D G +QAM VLD K YT L+ K +A+++ + M
Sbjct: 222 ILRTLCDSGKLKQAMEVLDRQL---QKECYPDVITYTILIEATCKESGVGQAMKLLDEM- 277
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD+ Y+ + + + G L E +K + M PS +P+++
Sbjct: 278 RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM---PSYGC------------QPNVI 322
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N +L + + +W + + + G PS T+ + + + + G + KM
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 382
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +L+Y L+ F +E K++ A+ + M RG Y L LC +G+
Sbjct: 383 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 442
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ ++ ++ S + P+ IT+ +I G + I + M + +P+I T ++
Sbjct: 443 DVAVEILNQLSS-KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 501
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ SR +A + F + +G ++P+ TY+S++ + Q +
Sbjct: 502 LVSGLSREGKVDEAIKFFHDL-------------EGLGIRPNAITYNSIMLGLCKSRQTD 548
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 183/478 (38%), Gaps = 59/478 (12%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D+ T L+ + G+ +A + + LE PD+ Y+ + + G +
Sbjct: 145 DIPDIIPCTSLIRGFCRIGKTKKATWVMEI-LEQSGAVPDVITYNVLISGYCKSGEIDNA 203
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF-KQLRK 342
+++++RM + PD+V YN +L S + K V +QL+K
Sbjct: 204 LQVLDRMN------------------VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 245
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
P TY + +E + + +M G +TY VL+ +EG+++E
Sbjct: 246 E-CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--LRHS-KPLEITFT 459
A+ + NM G + + +C+ GRW DA EK+ S LR P +TF
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA----EKLLSDMLRKGCSPSVVTFN 360
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI G + I I + M H C PN + N +L + + +A E +
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420
Query: 519 N--------SSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQWEYF 556
++ T L DG P TY+++++ + + E
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
+ M G + D ++ L+ SR GK F L G P+ + + +++
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540
Query: 617 AIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK----LLNALCN 670
++A+ + M TE +T L E I+ + L K LLN LC+
Sbjct: 541 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG----IAYEGLAKEALDLLNELCS 594
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 21/262 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L++ L + + + + M G LL G + +A+ LD +
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVG 278
D+ Y LL L K G+ A+ I N L + C+ P + Y++V L +VG
Sbjct: 421 GCYPDI---VTYNTLLTALCKDGKVDVAVEILNQLSSKGCS--PVLITYNTVIDGLSKVG 475
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ +KL++ MR+K L+PD++ Y+++++ + F
Sbjct: 476 KTERAIKLLDEMRRKG---------------LKPDIITYSSLVSGLSREGKVDEAIKFFH 520
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
L G++P+A TY M + +S + D +F M TY +L+ EG
Sbjct: 521 DLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 580
Query: 399 KINEAVAAVRNMEQRGVVGTAS 420
EA+ + + RG+V +S
Sbjct: 581 LAKEALDLLNELCSRGLVKKSS 602
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 126/331 (38%), Gaps = 37/331 (11%)
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
++++G+ + +F M G+ + L+R F GK +A + +EQ G V
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y L C +G +A+ V++++ + P +T+ ++ + D G + + +
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEVL 239
Query: 479 -QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
+ ++ C P++ T +++ + +A +L +E S KPD
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS-------------KPDV 286
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
TY+ ++ + + M GCQ + H +L G+ E
Sbjct: 287 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 346
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI----------NAMAYAPF---HITERQ 644
+L G P + F ++ Q +A+ ++ N+++Y P E++
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406
Query: 645 WTELFESNEDRISRD------KLEKLLNALC 669
E + +SR LL ALC
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 437
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 167/407 (41%), Gaps = 74/407 (18%)
Query: 222 KRDLKSRFV-----YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
K+ LK++FV + L+ L KA + EA +F M + N+ PD+ Y + +LG
Sbjct: 89 KQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFK-LNVSPDVYTYTILIRSLGT 147
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
+G + ++KL E M + +P+L Y++V++A + + +
Sbjct: 148 IGRIDAVMKLFESMTAQGC---------------QPNLFTYHSVMHAFGSAGRVDEACDI 192
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F+Q+ + GL+P A TY + ++ ++G+ + +F + KS +TY L+ +
Sbjct: 193 FQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDF---VGKSRSFTNEVTYNSLLSSLGR 249
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVY-----------------------------YELAC 427
+G I + M+ +G+V Y Y++
Sbjct: 250 KGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVT 309
Query: 428 ------CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
CL GR + A + + +K + +T+ LI G +D ++ M
Sbjct: 310 INNVLDCLSKAGRVEAAFELFQDMK-FKGLNADTVTYNILINGLGRAGKLDAAGALLLEM 368
Query: 482 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
+++ C PNI T N ++ Y + S A LF E + P+ +Y
Sbjct: 369 EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERG-------------VAPNVVSY 415
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
SS++E A + + +++ M GC + + L+ RAG+
Sbjct: 416 SSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGR 462
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 141/358 (39%), Gaps = 65/358 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ LG G M + + + + +L F Y ++ G AGR EA IF M+
Sbjct: 141 LIRSLGTIGRIDAVMKLFESMTAQGCQPNL---FTYHSVMHAFGSAGRVDEACDIFQQMV 197
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L PD Y+ + G+ G L+ + + R ++ V
Sbjct: 198 QK-GLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNE------------------V 238
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG------------ 363
YN++L++ +G+ +F Q++ GL + TY + +E + +G
Sbjct: 239 TYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEM 298
Query: 364 -----KYDLV------------------HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
KYD+V E F+ M G +TY +L+ GK+
Sbjct: 299 VDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKL 358
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD---AMLVVEKIKSLRHSKPLEIT 457
+ A A + ME+ G Y L + + G+W + A + ++K R P ++
Sbjct: 359 DAAGALLLEMEENGCAPNIITYNTL---ISSYGKWSNLSAATRLFLEMKE-RGVAPNVVS 414
Query: 458 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
++ LI G D IS+F+ MK + C PN T N ++ R F A E E
Sbjct: 415 YSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLRE 472
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 73/169 (43%), Gaps = 15/169 (8%)
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 509
+P T++ +I M GG + + + +++ M K P+ T N ++ ++ D +A
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+F + + N S PD YTY+ ++ + T + + +++ M GCQ
Sbjct: 121 NVFGDMFKLNVS-------------PDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQ 167
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
+ + ++ AG+ F +++ G P + + +LI A
Sbjct: 168 PNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTY-NILIDAF 215
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/325 (17%), Positives = 122/325 (37%), Gaps = 25/325 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P Y++++ + + ++KQ+ K+ P T+ + ++ + ++ + +
Sbjct: 63 PTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNV 122
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F M K + TY +L+R+ G+I+ + +M +G Y+ + +
Sbjct: 123 FGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGS 182
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
GR +A + +++ + +P +T+ LI + G ++ K N T
Sbjct: 183 AGRVDEACDIFQQMVQ-KGLQPDAVTYNILIDAFGKTGQLERAFDFVG--KSRSFTNEVT 239
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYT------------------FLSGD 529
N++L R ELF + +N Y +L
Sbjct: 240 YNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMV 299
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+K D T +++L+ + A + E +++ M G D + L+ RAGK
Sbjct: 300 DNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLD 359
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEML 614
+ E G P+ + + ++
Sbjct: 360 AAGALLLEMEENGCAPNIITYNTLI 384
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 167/414 (40%), Gaps = 50/414 (12%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK-LIERMR 291
+LL L + P ALR+ N L + P Y + LG +L+K L+ MR
Sbjct: 46 ELLTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMR 105
Query: 292 QKPSK-RIKNMHR-------------------KNWDPV--LEPDLVVYNAVLNACVPSHQ 329
++ + R+ +H DP+ ++ D VVYN +LN V +
Sbjct: 106 REGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSK 165
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
K + V+ ++ + G+KP T+ M+ + ++ + +M+ SG A T+
Sbjct: 166 MKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTT 225
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L++ F EEG I A+ M + G T L C GR +DA+ +++ +
Sbjct: 226 LMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQ-EIAN 284
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 508
+P +IT+ + GH+ + + M ++ +P++ T N ++ +N +A
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344
Query: 509 KELFEE---------TTRANSSGYTFLSGDG-------------APLKPDEYTYSSMLEA 546
K + + T N+ SG+ L PD YT++ ++ A
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ +++ M SGC D+ + L+ GK L A D L E
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK---LGKALDLLKE 455
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 156/379 (41%), Gaps = 31/379 (8%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ Y + L + G AL++ ++M+++ + PD+ Y+ V L + G L+E ++
Sbjct: 290 QITYNTFVNGLCQNGHVGHALKVMDVMVQEGH-DPDVFTYNIVVNCLCKNGQLEEAKGIL 348
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+M ++ PD+ +N ++ A ++ + + +Q+ GL P
Sbjct: 349 NQMVERGCL---------------PDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSP 393
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
T+ + + + + G L F +M SG +TY L+ GK+ +A+ +
Sbjct: 394 DVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 453
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ ME G + Y + LC R ++A V +++ L+ ITF LI
Sbjct: 454 KEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQM-DLQGISRNAITFNTLIDGLCK 512
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
IDD + M + +PN T N++L Y + KA ++ + T ++G+
Sbjct: 513 DKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT---ANGF--- 566
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+ D TY +++ A + + + +GM + G + + ++ R
Sbjct: 567 -------EVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRN 619
Query: 587 KCHLLEHAFDSLLEAGEIP 605
+ F + E GE P
Sbjct: 620 NTRDAMNLFREMTEVGEPP 638
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 20/286 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+ GL G A+ V+D + D+ F Y ++ L K G+ EA I N M+
Sbjct: 296 FVNGLCQNGHVGHALKVMDVMVQEGHDPDV---FTYNIVVNCLCKNGQLEEAKGILNQMV 352
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E L PDI ++++ V L L+E + L ++ K L PD+
Sbjct: 353 ERGCL-PDITTFNTLIVALCSGNRLEEALDLARQVTLKG---------------LSPDVY 396
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N ++NA + +F++++ SG P TY ++ + GK + ++M
Sbjct: 397 TFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM 456
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G +TY ++ ++ +I EA M+ +G+ A + L LC + R
Sbjct: 457 ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRI 516
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
DA ++ ++ S +P IT+ ++ G I I Q M
Sbjct: 517 DDANQLISQMIS-EGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 104/278 (37%), Gaps = 27/278 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G P ALR+F M + PD Y+++ L +G L + + L++
Sbjct: 396 YTFNILINALCKVGDPQLALRLFEEM-KSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454
Query: 289 RMRQKPSKR------------IKNMHRKNWDPVLEP--------DLVVYNAVLNACVPSH 328
M R K M + + V + + + +N +++
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ + Q+ GL+P+ TY + + G + + M +G + +TY
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYG 574
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ + G+ A+ +R M +G+ T Y + L +DAM + ++ +
Sbjct: 575 TLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEV 634
Query: 449 RHSK---PLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
+I F GL GG I + M D
Sbjct: 635 GEPPDAFTYKIVFRGL---CRGGGSIREAFDFLLEMVD 669
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 171/411 (41%), Gaps = 44/411 (10%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R L++ L + + M + GL T+ ++ G+ KG
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A+++L + + + + +Y+ ++ L K GR +A +F M E ++PD+ Y
Sbjct: 237 SALNLLRKMEEVS--HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ V G + +L++ M + RK + PD+V YNA++NA V
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEM----------LERK-----ISPDVVTYNALINAFVKE 338
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ ++ ++ G+ P+ TY ++ + + D F MA G + +T+
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + +I++ + + M + G+V + Y L G A+ +++++ S
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK------------DHCEPNIGTVNAM 495
P +T L+ D G + D + +F+ M+ + EP++ T N +
Sbjct: 459 -SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ F +A+EL+EE + PD TYSSM++
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRG-------------IVPDTITYSSMIDG 555
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 146/339 (43%), Gaps = 26/339 (7%)
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+L+ ++ RM ++P I ++++K + D+ +N ++ + F ++
Sbjct: 84 KLMGVVVRM-ERPDLVI-SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141
Query: 342 KSGLKPSAATY-----GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
K GL P T+ GL +E + S +L H+ F + +T+ L+
Sbjct: 142 KLGLHPDVVTFTTLLHGLCVEDRV-SEALNLFHQMFETTCRPN----VVTFTTLMNGLCR 196
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
EG+I EAVA + M + G+ T Y + +C G A+ ++ K++ + H P +
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
++ +I S G D ++F M++ P++ T N+M+ + + +S A++L +E
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
S PD TY++++ A ++ E +Y M G + +
Sbjct: 317 LERKIS-------------PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ ++ + + EH F + G P+ + F ++
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/325 (18%), Positives = 134/325 (41%), Gaps = 16/325 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V + ++ V + V +++++ + ++ ++ + ++ K
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F K+ K G +T+ L+ E +++EA+ M + + L LC
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNI 489
GR +A+ +++++ +P +IT+ ++ G +++ + M++ H PN+
Sbjct: 197 EGRIVEAVALLDRMME-DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+A++ ++ S A+ LF E + PD +TY+SM+ +
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-------------IFPDLFTYNSMIVGFCS 302
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ +W E + + M D + L+ + GK E +D +L G IP+ +
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 610 FTEMLIQAIVQSNYEKAVALINAMA 634
++ M+ Q+ + A + MA
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMA 387
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ G + AL + M+ L PDI ++ L G LK+ +++ + M
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK K + H N +EPD+ YN +++ + ++ +++++ G+ P
Sbjct: 492 -QKSKKDLDASHPFNG---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ + + + D + F M + +T+ L+ + + G++++ + M
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+RG+V A Y L C G A+ + +++ S
Sbjct: 608 GRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 149/401 (37%), Gaps = 56/401 (13%)
Query: 181 MNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
M + G+ +FT M+ G G W A +L + K D+ + Y L+
Sbjct: 281 MQEKGIFPDLFTYNSMIV---GFCSSGRWSDAEQLLQEMLERKISPDVVT---YNALINA 334
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--- 294
K G+ EA +++ ML + P+ Y S+ + L + M K
Sbjct: 335 FVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 295 --------------SKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+KRI + + + + L D YN +++ +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA-----------LT 386
+++ SGL P T ++ + +GK E F+ M KS + + A T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y +L+ EGK EA M RG+V Y + LC R +A + + +
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF 505
S S P +TFT LI G +DD + +F M + N T ++ + +
Sbjct: 574 SKSFS-PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ A ++F+E SSG + PD T +ML
Sbjct: 633 NGALDIFQEMI---SSG----------VYPDTITIRNMLTG 660
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 101/255 (39%), Gaps = 24/255 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ ++E + A + +++ L+ L LL+ + G ++ + GL
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D LK ++ ++ K+ + +A FN + PD+ Y+ + L G
Sbjct: 477 DNGKLKDAL---EMFKVMQKSKKDLDASHPFN------GVEPDVQTYNILISGLINEGKF 527
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E +L E M HR + PD + Y+++++ + +F +
Sbjct: 528 LEAEELYEEMP----------HRG-----IVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
P+ T+ + ++G+ D E F +M + G A+TY L+ F + G I
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 401 NEAVAAVRNMEQRGV 415
N A+ + M GV
Sbjct: 633 NGALDIFQEMISSGV 647
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 114/566 (20%), Positives = 217/566 (38%), Gaps = 87/566 (15%)
Query: 106 DNLKRENLREL----KEMFEKDLNWVLDD-------DVQLGSDYFAKNVEWHPEKRWRSE 154
D + E LRE+ KE+ K LN ++ +V L K+ + P + +
Sbjct: 187 DRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNA 246
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
+ + D+L ++ R M++ GL E + + L G WR+A+S+++
Sbjct: 247 LVQVFLRADKLDTAQLVH------REMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE 300
Query: 215 WVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
K D + + +Y K+++ L +A EA+ N M + P++ Y +
Sbjct: 301 -------KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM-RSTSCIPNVQTYRIL--- 349
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + + + KRI +M P ++N++++A S +
Sbjct: 350 ---------LCGCLNKKQLGRCKRILSMMIAEG---CYPSYTIFNSLVHAYCKSDDFSYA 397
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGK------YDLVHEFFRKMAKSGEAIGALTY 387
+ + K++ K KP Y + + + G+ ++L + + +M +G + +
Sbjct: 398 YKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNV 457
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
R GK +A + M G V S Y E+ LCN R ++A + +++K
Sbjct: 458 VSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKG 517
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 506
P T+T LI G I + M +D CEP + T ++ Y + S
Sbjct: 518 -TGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS 576
Query: 507 KAKELFEE-----------TTRANSSGYT---------------------------FLSG 528
A ELFE T A GY F
Sbjct: 577 VANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ KP+ TY ++++ AH+ + + + M + GC+ + + L+ +A K
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEML 614
+ F ++E G P+ ++ ++
Sbjct: 697 DEAQEVFHKMVEHGYNPNVYTYSSLI 722
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 127/289 (43%), Gaps = 10/289 (3%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ KA + A +F LM+ +P++ Y ++ + G +++ ++ RM
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAK-GCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Query: 291 RQKPSKRIKNMHRKNWDPVLE-PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
R +M+ K + V E P++V Y A+++ +H+ K + + + G +P+
Sbjct: 621 RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNT 680
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ ++ K D E F KM + G TY L+ +++ +++ + +
Sbjct: 681 IVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSK 740
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDA---MLVVEKIKSLRHSKPLEITFTGLIISSM 466
M + +Y E+ L + +A ML++E+ + KP +T+T +I
Sbjct: 741 MLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE----KGCKPNVVTYTAMIDGFG 796
Query: 467 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G +D C+ +F+ M C PN T ++ +A L EE
Sbjct: 797 KAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 147/383 (38%), Gaps = 66/383 (17%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y+ V+ + + + F++FK+++ +G+ P TY + ++ ++G H +
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M + G +TY L+ A+ + K++ A M +G Y L C
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606
Query: 432 NGRWQDAMLVVE---------------KIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
+G + A + KIK+ KP +T+ L+ + D
Sbjct: 607 SGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARD 666
Query: 477 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ + M D CEPN +A++ + + +A+E+F + GY P
Sbjct: 667 LLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE---HGYN----------P 713
Query: 536 DEYTYSS--------------------MLEASATAHQWEYFEYV------------YKGM 563
+ YTYSS MLE S + Y E + YK M
Sbjct: 714 NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM 773
Query: 564 AL---SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
+ GC+ + + ++ +AGK F + G P+ + +T ++
Sbjct: 774 LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCAT 833
Query: 621 SNYEKAVALINAM--AYAPFHIT 641
+ ++A AL+ M Y P H++
Sbjct: 834 GHLDEAYALLEEMKQTYWPKHVS 856
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 97/245 (39%), Gaps = 51/245 (20%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT+++ L K + EA ++ LM+E+ P++ Y ++ G+ G + + ++L
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLM-LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFRE 810
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS----------HQWKGVFW---- 335
M K P+ V Y ++N C + + K +W
Sbjct: 811 MGSKGCA---------------PNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHV 855
Query: 336 -------------------VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+ +++ K+G P Y + ++ +++G+ ++ E +++
Sbjct: 856 SSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVI 915
Query: 377 KSGEAIGAL--TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ ++ A Y L+ +F KI A +M + GV+ + L L R
Sbjct: 916 SASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRR 975
Query: 435 WQDAM 439
W++A+
Sbjct: 976 WEEAL 980
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/482 (18%), Positives = 197/482 (40%), Gaps = 44/482 (9%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL 186
+D ++ + +F +W ++R + ++ L+ L E M + WK ++ M +S
Sbjct: 100 IDVEIHVKIQFF----KWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTC 155
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
+ + +++K LG +A+S+ Y +K ++ + Y ++ +L + G +
Sbjct: 156 VIGPADLSEIVKVLGKAKMVNKALSIF---YQIKGRKCKPTSNTYNSMILMLMQEGHHEK 212
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN--- 300
++N M + + PD Y ++ G++G + L + M++ P+ +I
Sbjct: 213 VHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTIL 272
Query: 301 -----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV---------FWVFKQLRKSGLK 346
+ R L ++ L + KGV + +F + K G K
Sbjct: 273 GIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCK 332
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVA 405
P + ++ ++G+ + F +M +TY +++A +E + + +EA
Sbjct: 333 PDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFL 392
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
M++ GVV ++ Y L C R + A+L++E++ + P + LI +
Sbjct: 393 WYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDE-KGFAPCPAAYCSLINAL 451
Query: 466 MDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ +FQ ++++C + V A M+K + S+A +LF E + +
Sbjct: 452 GKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCN--- 508
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
PD Y Y++++ + + + M +GC D H +L +R
Sbjct: 509 ----------PDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFAR 558
Query: 585 AG 586
G
Sbjct: 559 TG 560
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 159/360 (44%), Gaps = 45/360 (12%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVA 271
L V +K+K + + YT+L+ +GKAG+ EA IF N++ E C PD+ +++
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCK--PDVVLINNLI 342
Query: 272 VTLGQVGLLKELVKLIERMRQ---KPSKRIKNM------------------HRKNWDPVL 310
LG+ G L + +KL E M P+ N + K + +
Sbjct: 343 NLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGV 402
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P Y+ +++ +++ + + +++ + G P A Y + + ++ +Y+ +E
Sbjct: 403 VPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANE 462
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F+++ ++ A Y V+++ + G+++EAV M++ G Y L +
Sbjct: 463 LFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPL---EITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 486
G +A ++ ++ + L I G + G I+ +F MK+ +
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIE----MFTRMKNSKIK 578
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ + N +L SR MF +A +L +E NS G+ + D TYSS+LEA
Sbjct: 579 PDVVSYNTVLGCLSRAGMFEEAAKLMKEM---NSKGFEY----------DLITYSSILEA 625
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 24/244 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE---L 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVG 278
++ S VY ++ LGK GR EA+ +FN M + CN PD+ AY+++ + +VG
Sbjct: 468 RENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCN--PDVYAYNALMSGMVRVG 525
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E L+ M + PDL +N +LN + KG +F
Sbjct: 526 MTDEAHSLLRTMEENGCT---------------PDLNSHNIILNGFARTGGPKGAIEMFT 570
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+++ S +KP +Y + + ++G ++ + ++M G +TY ++ A G
Sbjct: 571 RMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV---G 627
Query: 399 KINE 402
KI+E
Sbjct: 628 KIDE 631
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 159/367 (43%), Gaps = 34/367 (9%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
++++ +LGKA ++AL IF ++ P Y+S+ + L Q G +++ +L M
Sbjct: 163 SEIVKVLGKAKMVNKALSIF-YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEM- 220
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
N L PD V Y+A++ A + +F +++++GL P+A
Sbjct: 221 ------------CNEGDCL-PDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKI 267
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + + + G+ + ++M + G A+ TY L++ + GK+ EA + NM
Sbjct: 268 YTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNML 327
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-GH 470
+ G + L L GR DA+ + E+++SL+ + P +T+ +I + +
Sbjct: 328 KEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCT-PNVVTYNTVIKALFESKAR 386
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ ++ MK++ P+ T + ++ + + + KA L EE D
Sbjct: 387 ASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM-------------D 433
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
P Y S++ A A ++E +++ + C + ++++ GKC
Sbjct: 434 EKGFAPCPAAYCSLINALGKAKRYEAANELFQELR-ENCGYSSARVYAVMIK--HLGKCG 490
Query: 590 LLEHAFD 596
L A D
Sbjct: 491 RLSEAVD 497
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 73/197 (37%), Gaps = 15/197 (7%)
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ LI + G + + Q M + C ++ ++KV + M +KA +F +
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG-CQLDQTK 574
G KP TY+SM+ E +Y M G C D
Sbjct: 186 -------------KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVT 232
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
++ L+ + G+ FD + E G P +T +L EKA+ L+ M
Sbjct: 233 YSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMK 292
Query: 635 YAPFHITERQWTELFES 651
+T +TEL +
Sbjct: 293 EKGCALTVYTYTELIKG 309
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 135/318 (42%), Gaps = 24/318 (7%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+ Y A ++ C+ S + ++R+ ++ + T+ M V ++ GK L E +
Sbjct: 67 DVYSYTATISLCIYSQDVDRAMELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLALEIY 126
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLC 430
M + +TY LV + + G+ A+ + M+Q GV Y L AC +C
Sbjct: 127 NNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLMKQEGVEPVLRTYNTLIIACNMC 186
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
N R +A+ V +++ S ++ P T+ LI + + + ++Q M + + E ++
Sbjct: 187 NQPR--EALAVYQRLLSDGYT-PNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSV 243
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++++ + + A +F E + N P+ TY+S++ A A
Sbjct: 244 ITYSSLISACEKAGQWETALRIFNEMQQDNCV-------------PNTVTYNSLVTACAQ 290
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
QWE V++ M GC D + L+ R G+ AF + G P +
Sbjct: 291 GGQWEKATEVFEQMTAHGCTPDVVTYTALISAYERGGQWQKALQAFGKMCMQGCKPDAIV 350
Query: 610 FTEMLIQAIVQSNYEKAV 627
+ AI+ + +E +
Sbjct: 351 YN-----AIIDTLWETGI 363
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 18/267 (6%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ + K G+ AL I+N M N P++ Y+++ G++G + + +++ M
Sbjct: 106 FTALMNVCIKCGKLPLALEIYNNM-RAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLM 164
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+Q+ +EP L YN ++ AC +Q + V+++L G P++
Sbjct: 165 KQEG---------------VEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGYTPNST 209
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + ++ + E +++M + +TY L+ A + G+ A+ M
Sbjct: 210 TYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFNEM 269
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+Q V Y L G+W+ A V E++ + P +T+T LI + GG
Sbjct: 270 QQDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTA-HGCTPDVVTYTALISAYERGGQ 328
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAML 496
+ F M C+P+ NA++
Sbjct: 329 WQKALQAFGKMCMQGCKPDAIVYNAII 355
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 150/380 (39%), Gaps = 69/380 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDK---RDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
LLK L G R+AM + DW+ ++ R L + YT +++
Sbjct: 33 LLKDLSRLGKDRRAMELFDWLRSANERSPLRQLCDVYSYTATISL--------------- 77
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
C D+ ++L+ MRQ+ +R N+H
Sbjct: 78 -----CIYSQDV----------------DRAMELMNEMRQRNIER--NVH---------- 104
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+ A++N C+ + ++ +R + P+ TY ++V + G+++
Sbjct: 105 ---TFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHVL 161
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
M + G TY L+ A + EA+A + + G ++ Y L
Sbjct: 162 DLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGYTPNSTTYNALISAYGKT 221
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
+ A+ V +++ + + IT++ LI + G + + IF M +D+C PN T
Sbjct: 222 MQLGKALEVYQEMLRQNMERSV-ITYSSLISACEKAGQWETALRIFNEMQQDNCVPNTVT 280
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N+++ ++ + KA E+FE+ T + G T PD TY++++ A
Sbjct: 281 YNSLVTACAQGGQWEKATEVFEQMT---AHGCT----------PDVVTYTALISAYERGG 327
Query: 552 QWEYFEYVYKGMALSGCQLD 571
QW+ + M + GC+ D
Sbjct: 328 QWQKALQAFGKMCMQGCKPD 347
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 19/227 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W +A+ VLD + + L++ Y L+ +P EAL ++ +L
Sbjct: 144 LVDVYGKLGRWERAIHVLDLMKQEGVEPVLRT---YNTLIIACNMCNQPREALAVYQRLL 200
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P+ Y+++ G+ L + +++ + M ++ NM R ++
Sbjct: 201 SD-GYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQ------NMER---------SVI 244
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+++++AC + QW+ +F ++++ P+ TY + Q G+++ E F +M
Sbjct: 245 TYSSLISACEKAGQWETALRIFNEMQQDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQM 304
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G +TY L+ A+ G+ +A+ A M +G A VY
Sbjct: 305 TAHGCTPDVVTYTALISAYERGGQWQKALQAFGKMCMQGCKPDAIVY 351
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 154/342 (45%), Gaps = 41/342 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT+L+ LGKAGR EA ++ ML D L PD+ +++ LG+VG L+EL +
Sbjct: 304 YTYTELIKGLGKAGRVEEAYDLYKNMLTD-GLTPDVVFLNNLMNILGKVGRLEELTNVFN 362
Query: 289 RM---RQKPSKRIKNMHRK----NWDPVLE--------------PDLVVYNAVLNACVPS 327
M R P+ N K + PV E P Y+ +++ +
Sbjct: 363 EMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKT 422
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + + +++ + G P A Y + + ++ +Y+ +E F+++ ++ + + Y
Sbjct: 423 NRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVY 482
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
V+++ F + GK++EAV M+ +G Y L + G +A ++ K++
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKME- 541
Query: 448 LRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSRNDM 504
+ +I +I++ G I +F+ MK HC +P+ T N +L ++ M
Sbjct: 542 -ENGCTADINSHNIILNGFARTGVPRRAIEMFETMK-HCGIKPDGVTYNTLLGCFAHAGM 599
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
F +A L E G+ + D TYSS+L+A
Sbjct: 600 FEEAARLMREM---KDKGFEY----------DAITYSSILDA 628
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/429 (18%), Positives = 170/429 (39%), Gaps = 40/429 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y+ L++ K GR A+R+F+ M ++C + P Y ++ +VG +++ + L E
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNC-MQPTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M++ P + Y ++ + + + + ++K + GL P
Sbjct: 293 EMKRAGC---------------SPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPD 337
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVAAV 407
M ++ + G+ + + F +M ++Y +++A +E + ++E +
Sbjct: 338 VVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWF 397
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M+ GV + Y L C R + A+L++E++ + P + LI +
Sbjct: 398 DKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE-KGFPPCPAAYCSLINALGK 456
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNA-----MLKVYSRNDMFSKAKELFEETTRANSSG 522
+ +F+ +K+ N G V++ M+K + + S+A +LF E S
Sbjct: 457 AKRYEAANELFKELKE----NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG- 511
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
PD Y Y++++ A + + M +GC D H +L
Sbjct: 512 ------------PDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGF 559
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE 642
+R G F+++ G P + + +L +E+A L+ M F
Sbjct: 560 ARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDA 619
Query: 643 RQWTELFES 651
++ + ++
Sbjct: 620 ITYSSILDA 628
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
E L Y + E R S +G + LV+A +++A++ + R
Sbjct: 138 EARLYGEMYRTIQEVVRNTYVS---VGPVVLSELVKALGRAKMVSKALSVFYQAKGRKCK 194
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
T+S Y + L G+ + V ++ + P IT++ LI S G D I
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 477 IFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+F MKD+C +P +L +Y + KA +LFEE RA S P
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS-------------P 301
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
YTY+ +++ A + E +YK M G D L+ + G+ L + F
Sbjct: 302 TVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVF 361
Query: 596 DSL 598
+ +
Sbjct: 362 NEM 364
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 154/369 (41%), Gaps = 34/369 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V ++L+ LG+A +AL +F + P + Y+SV + L Q G +++ ++
Sbjct: 164 VLSELVKALGRAKMVSKALSVF-YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + PD + Y+A++++ + +F +++ + ++P+
Sbjct: 223 MCNEGD--------------CFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTE 268
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y + + + GK + + F +M ++G + TY L++ + G++ EA +N
Sbjct: 269 KIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKN 328
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG- 468
M G+ L L GR ++ V ++ + R + P +++ +I + +
Sbjct: 329 MLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCT-PTVVSYNTVIKALFESK 387
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
+ + S F MK D P+ T + ++ Y + + KA L EE +
Sbjct: 388 APVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEE-----------MD 436
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
G P P Y S++ A A ++E ++K + + + +A ++ GK
Sbjct: 437 EKGFP--PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMI---KHFGK 491
Query: 588 CHLLEHAFD 596
C L A D
Sbjct: 492 CGKLSEAVD 500
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 173/412 (41%), Gaps = 39/412 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL K A+ + D + + + D+ Y+ ++ L K G A+++ M
Sbjct: 53 LLNGLSSKAKIIDAVKLFDEMVKMGYEPDV---ITYSTIINGLCKMGSTTMAIQLLKKM- 108
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS--------KRIKNMHRK 304
E+ P++ Y ++ +L + L+ E ++ + M + P+ N+ R
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168
Query: 305 N-----WDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
N + ++E PD V +N +++ VF+ + + G++P+ TY
Sbjct: 169 NEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNAL 228
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
M+ + D + F M + G A +Y +L++ + G+I+EA + M + +
Sbjct: 229 MDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
Y L C +GR QDA ++E+++S P +T++ ++ GH+D+
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRS-YGLLPDLMTYSIVLDGLCKQGHLDEAF 347
Query: 476 SIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
+ + M++ EPNI +++ A+ELF F+ G ++
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN---------LFVKG----IQ 394
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
PD TY+ M+ +++ MA+ GC + + ++ R G
Sbjct: 395 PDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNG 446
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 121/281 (43%), Gaps = 17/281 (6%)
Query: 310 LEPDLVVYNAVLNA-CVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
+ PD+ ++N C +H + F V + K GL+P+ T+ + + K
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
+ F +M K G +TY ++ + G A+ ++ ME++G VY +
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 486
LC + +AM + ++ + R P +T++ ++ + G ++ S+F+ M + +
Sbjct: 126 SLCKDKLITEAMEFLSEMVN-RGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+ T N ++ S+ M +A+ +FE ++P+ TY+++++
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKG-------------VEPNVNTYNALMDG 231
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ Q + + ++ M GC + L+ ++G+
Sbjct: 232 YCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR 272
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 116/298 (38%), Gaps = 19/298 (6%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+ + +LVD LS+ M + M + G+ L+ G +
Sbjct: 180 ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMD 239
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A + + + ++S Y L+ K+GR EA + M L PD Y
Sbjct: 240 EAQKLFNIMVRKGCAPSVRS---YNILIKGHCKSGRIDEAKGLLAEMSHKA-LTPDTVTY 295
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ Q G ++ KL+E MR L PDL+ Y+ VL+
Sbjct: 296 STLMKGFCQDGRPQDAQKLLEEMRSYG---------------LLPDLMTYSIVLDGLCKQ 340
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
F + K +++S ++P+ Y + ++ M GK + E F + G +TY
Sbjct: 341 GHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTY 400
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
V++ + G NEA R+M G + + Y + NG +A ++E++
Sbjct: 401 TVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEM 458
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 132/305 (43%), Gaps = 15/305 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD + +++ ++ + Q+ + G +P TYG + + + G DL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+KM K + Y ++ + +++A+ M+ +G+ Y L CLC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
N GRW DA ++ + R P +TF+ LI + + G + + ++ M K +P+I
Sbjct: 305 NYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T ++++ + +D +AK +FE +S D P+ TYS++++
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFE----------LMISKD---CFPNVVTYSTLIKGFCK 410
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A + E +++ M+ G + + L+ +A C + F ++ G P+ L
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 610 FTEML 614
+ +L
Sbjct: 471 YNILL 475
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 182/479 (37%), Gaps = 69/479 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G A++++D + + K D F +T L+ L + EA+ + + M+
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPD---TFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C PD+ Y +V L + G + + L+++M + +E D+
Sbjct: 216 QRGCQ--PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK---------------IEADV 258
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V+YN +++ +F ++ G++P TY + + G++
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + +T+ L+ AF +EGK+ EA M +R + Y L C + R
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 435 WQDAM----LVVEK------------IKSLRHSKPLE------------------ITFTG 460
+A L++ K IK +K +E +T+T
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 461 LIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
LI D+ +F+ M PNI T N +L +N +KA +FE R+
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++PD YTY+ M+E A + E ++ ++L G + + ++
Sbjct: 499 -------------MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
R G + + E G +P+ + ++ + + E + LI M F
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y+ L+ R EA +F LM+ +DC +P++ Y ++ + ++E ++L
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 288 ERMRQK--------------------PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
M Q+ + + ++ + P+++ YN +L+ +
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ VF+ L++S ++P TY + +E M ++GK + E F ++ G + + Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
++ F +G EA + ++ M++ G + + Y L +G + + ++++++S
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Query: 448 LRHSKPLEITFTGLIISSMDGGHID 472
+ + + GL+ + + G +D
Sbjct: 602 CGFAG--DASTIGLVTNMLHDGRLD 624
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 170/407 (41%), Gaps = 38/407 (9%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK-L 234
+F+R M + +G + L+ GL +G A+ + W L+ + + V T L
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL--WFRLLE--KGFGANLVTTNAL 497
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K G EA+R+ MLE D Y+++ + G ++E KL M ++
Sbjct: 498 IHGLCKTGNMQEAVRLLKKMLER-GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+EPD YN +++ + ++ + + L P+ TYG+
Sbjct: 557 ---------------IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 601
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ ++ K + + F ++ + ++ Y L+RA+ G EA +M +G
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 661
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ T + Y L +CN GR +DA ++++++ P + +T LI G +D
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRK-EGLLPNVVCYTALIGGYCKLGQMDKV 720
Query: 475 ISIFQHMKDH-CEPNIGTVNAMLKVYSRN-DMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+++ Q M + PN T M+ YS++ DM + AK L E G
Sbjct: 721 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV--------------GKG 766
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ PD TY+ + + E + M+ G LD+ + L+
Sbjct: 767 IVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 6/224 (2%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD+ +++ +NA + + +F + K G+ P+ TY + + + G D
Sbjct: 242 VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAF 301
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F KM K G +TY VL+ + K NEA + ++ ++G VY L
Sbjct: 302 RFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGY 361
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C G DA+ + + S + P +T +I G ++ I + M N
Sbjct: 362 CKMGNLGDALRIRGDMVS-KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSIN 420
Query: 489 IGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTFLSG 528
G ++ N F A +E+ R N T L G
Sbjct: 421 PGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 464
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/524 (17%), Positives = 203/524 (38%), Gaps = 41/524 (7%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++F M + G+ T L+ GL + +A SVL +K + VY L
Sbjct: 301 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETL---EKGFTPNEVVYNTL 357
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ K G +ALRI M+ + P+ +S+ ++G +++ ++E M +
Sbjct: 358 IDGYCKMGNLGDALRIRGDMVSK-GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ P + +++ + +++ +++ ++P+
Sbjct: 417 FS-------------INPG--AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 461
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + + GK+ E + ++ + G +T L+ + G + EAV ++ M +RG
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Query: 415 VVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
V Y L C G+ ++ L E +K + +P T+ LI G +D+
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK--QGIEPDTFTYNLLIHGMCRIGKLDE 579
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
++++ K PN+ T M+ Y + D + ++LF E N
Sbjct: 580 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN------------- 626
Query: 533 LKPDEYTYSSMLEASA-TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L+ + Y++++ A + E F+ ++ M G ++ L+ G+
Sbjct: 627 LELNSVVYNTLIRAYCRNGNTVEAFK-LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 685
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+ D + + G +P+ + +T ++ +K V ++ M+ H + +T + +
Sbjct: 686 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 745
Query: 652 NEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
KLL+ + +T + L+ + C+ K
Sbjct: 746 YSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLT---NGFCKEGK 786
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P + +L++ V +++ + +WVF+ +R+ G+ P + A+ + GK + +
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 268
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F M K G + +TY L+ + G ++EA M + GV T Y L L
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
++ +A V+++ + P E+ + LI G++ D + I M PN
Sbjct: 329 LEKFNEANSVLKETLE-KGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 387
Query: 491 TVNAMLKVYSRNDMFSKAKELFEE 514
T+N++++ + + +A+ + EE
Sbjct: 388 TLNSIIQGFCKIGQMEQAECILEE 411
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/471 (20%), Positives = 190/471 (40%), Gaps = 53/471 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L++ L D+G A+S+LD + +R + V YT LL + K +A+ + + M
Sbjct: 148 LIRVLCDRGRVADALSLLDDML----RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM 203
Query: 255 -LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ C P+I Y+ + + + G + + L+ R+ + +PD
Sbjct: 204 RAKGCT--PNIVTYNVIINGMCREGRVDDARDLLNRL---------------FSYGCQPD 246
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
V Y +L S +W V +F ++ + P+ T+ + + + G + + +
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M + A +++ + ++G++++A + NM G Y + LC
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366
Query: 434 RWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
RW DA L+ E +++ + P E+TF I G I+ I + + M++H C + T
Sbjct: 367 RWNDAKELLKEMVRN--NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVT 424
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
NA++ + A ELF P KP+ TY+++L A
Sbjct: 425 YNALVNGFCVQGHIDSALELFRSM----------------PCKPNTITYTTLLTGLCNAE 468
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPL 608
+ + + M C + L+ + G L+ A + ++E G P+ +
Sbjct: 469 RLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKG---FLDEAIELVEQMMEHGCTPNLI 525
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 656
+ + + E A+ L++ + +P IT + S EDR+
Sbjct: 526 TYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGIL-SKEDRV 575
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 169/431 (39%), Gaps = 46/431 (10%)
Query: 219 LKDKRDLKSRFVY--TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
L RD ++ VY TKL+ L + GR +A R+ E D+ AY+++ +
Sbjct: 64 LSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA-EGSGSPVDVFAYNTLVAGYCR 122
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G L +LI M PV PD Y ++ + +
Sbjct: 123 YGHLDAARRLIGSM-----------------PV-APDAYTYTPLIRVLCDRGRVADALSL 164
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
+ + G +P+ TY + +E M ++ ++ +M G +TY V++
Sbjct: 165 LDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCR 224
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLE 455
EG++++A + + G Y L LC + RW D L E ++ ++ P E
Sbjct: 225 EGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMME--KNCMPNE 282
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+TF LI GG ++ I + Q M +H C N N ++ + A
Sbjct: 283 VTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDA------ 336
Query: 515 TTRANSSGYTFLSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
+ FL+ G+ PD +Y+++L+ A +W + + K M + C ++
Sbjct: 337 --------FKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEV 388
Query: 574 KHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
+ + G L+E A + + E G + + ++ VQ + + A+ L
Sbjct: 389 TFNTFICILCQKG---LIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF 445
Query: 631 NAMAYAPFHIT 641
+M P IT
Sbjct: 446 RSMPCKPNTIT 456
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 137/328 (41%), Gaps = 42/328 (12%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
AI+VL +++E E A N I+ S + +G++ K L + GS
Sbjct: 301 AIQVL-QQMTEHE-CATNTTLCNIVINS--ICKQGRVDDAFKFLNNMGS----------- 345
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
YG YT +L L +A R ++A + M+ + N P+ +++ L Q
Sbjct: 346 YGCN-----PDTISYTTVLKGLCRAERWNDAKELLKEMVRN-NCPPNEVTFNTFICILCQ 399
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFW 335
GL+++ + LIE+M++ +V YNA++N CV H +
Sbjct: 400 KGLIEQAIMLIEQMQEHGCTV---------------GVVTYNALVNGFCVQGH----IDS 440
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ R KP+ TY + + + + D E +M +T+ VLV F
Sbjct: 441 ALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFC 500
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
++G ++EA+ V M + G Y L + + +DA+ ++ + S + P
Sbjct: 501 QKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVS-KGVSPDV 559
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD 483
ITF+ +I +++ I +F +D
Sbjct: 560 ITFSSIIGILSKEDRVEEAIQMFHLAQD 587
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 109/292 (37%), Gaps = 37/292 (12%)
Query: 149 KRWRSEAEAIRVLV-DRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+RW E ++ +V + E+T F+ I+ Q GL+ Q + L++ + + G
Sbjct: 366 ERWNDAKELLKEMVRNNCPPNEVTFNT--FICILCQKGLI---EQAIMLIEQMQEHGCTV 420
Query: 208 QAMSVLDWVYGLKDKRDLKS-------------RFVYTKLLAILGKAGRPHEALRIFNLM 254
++ V G + + S YT LL L A R A + M
Sbjct: 421 GVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEM 480
Query: 255 L-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
L DC P++ ++ + Q G L E ++L+E+M + P+
Sbjct: 481 LHRDCP--PNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCT---------------PN 523
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
L+ YN + + + + L G+ P T+ + ++ + + + + F
Sbjct: 524 LITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFH 583
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
G AL Y ++ + +I+ A+ + M G + S Y L
Sbjct: 584 LAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIIL 635
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 176/427 (41%), Gaps = 56/427 (13%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L + Y L+ L K G +AL++F+ MLE + PD+ Y + +L G +++
Sbjct: 211 LPNSTTYIVLMDGLCKRGMAVDALKMFDEMLER-GIVPDVKIYTVLLSSLCNEGRIEDAG 269
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L+ M++ N P PD V Y L+ + + F F+ L+ G
Sbjct: 270 RLLCSMKE------------NGCP---PDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGG 314
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
Y ++ + Q+G++D ++ +M + Y +L+R F E G+ +A
Sbjct: 315 FTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAF 374
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ M+ +G V Y L L + G A ++ ++ L+++ L+ T ++I
Sbjct: 375 LLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEM--LQNNVVLDSTTHNIMIC 432
Query: 465 SM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS-- 520
+ G ID + +F M +H C P + T NA++ R M +A+ LF + N+
Sbjct: 433 GLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPS 492
Query: 521 ---------------------------SG-----YTFLSG-DGAPLKPDEYTYSSMLEAS 547
SG Y L G + + PD TY++++
Sbjct: 493 LFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGL 552
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH- 606
A + ++K + L G D+ + L+ RA + + F ++L +G P
Sbjct: 553 CKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSL 612
Query: 607 PLFFTEM 613
P++ T M
Sbjct: 613 PIYNTMM 619
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 132/337 (39%), Gaps = 33/337 (9%)
Query: 318 NAVLNACVPSHQWKG----VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+A A V +H G F ++ +P+A Y +V++ G L +
Sbjct: 144 SAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYN 203
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M SG + TY VL+ + G +A+ M +RG+V +Y L LCN G
Sbjct: 204 RMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEG 263
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNIG- 490
R +DA ++ +K P E+T+T + G +D+ F+ ++D IG
Sbjct: 264 RIEDAGRLLCSMKE-NGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGY 322
Query: 491 --TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL---------SGDGAPL------ 533
++ + + ++ S E+ ++ + + YT L + D L
Sbjct: 323 SCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKD 382
Query: 534 ---KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
PD + Y+++L+A + + + M + LD T H ++ + G
Sbjct: 383 KGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDK 442
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
FD + E G HP T M A++ Y +
Sbjct: 443 AMQVFDEMGEHG--CHP---TVMTYNALIDGLYRAGM 474
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 139 FAKNVEWHPEKRWRSEAEAIR---VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLK 195
F + + ++ E +S + I +L+ R +E T + + M G +
Sbjct: 335 FDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNT 394
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLK L D G+ +A S++ + L++ L S + ++ L K G +A+++F+ M
Sbjct: 395 LLKALFDVGNIDRAQSLMSEM--LQNNVVLDST-THNIMICGLCKKGLIDKAMQVFDEMG 451
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR--QKPS---------KRIKNMH-- 302
E +P + Y+++ L + G+L+E L +M PS ++++
Sbjct: 452 EH-GCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESL 510
Query: 303 RKNWDPVLE--------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
RK D + + PD+V YN ++N + G +FK+L+
Sbjct: 511 RKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQL 570
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
G+ P TYG ++ + ++ + + F+ + +SG Y ++R+ K+++
Sbjct: 571 KGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQ 630
Query: 403 AV 404
A+
Sbjct: 631 AI 632
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 116/305 (38%), Gaps = 19/305 (6%)
Query: 332 GVFWVFKQLRKSGL-KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+F R +GL PSAA L + +G++ E F +M A Y +
Sbjct: 127 AMFDALADARAAGLPAPSAAFRALVL-AHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAV 185
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ + G I A+A M G + ++ Y L LC G DA+ + +++ R
Sbjct: 186 FQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLE-RG 244
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
P +T L+ S + G I+D + MK++ C P+ T L + +
Sbjct: 245 IVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKA---GRVD 301
Query: 510 ELFEETTRANSSGYTF-LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
E F G+T L G YS +++ A +++ Y M
Sbjct: 302 EAFHRFELLQDGGFTLGLIG-----------YSCLIDGLFQAGRFDEGLSYYTEMLGKSI 350
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
D T + L+ + AG+ D + + G +P + +L N ++A +
Sbjct: 351 SPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQS 410
Query: 629 LINAM 633
L++ M
Sbjct: 411 LMSEM 415
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 107/264 (40%), Gaps = 34/264 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ + G + A +LD +KDK + F Y LL L G A + + ML
Sbjct: 360 LIRRFAEAGRTKDAFLLLDE---MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEML 416
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ N+ D ++ + L + GL+ + +++ + M + P ++
Sbjct: 417 QN-NVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGC---------------HPTVM 460
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA---ATYGL-----------AMEVMLQ 361
YNA+++ + + +F ++ + G PS T G ++ M Q
Sbjct: 461 TYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQ 519
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
SG+ ++ R + +SG +TY L+ + ++ A+ + ++ +G+
Sbjct: 520 SGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEIT 579
Query: 422 YYELACCLCNNGRWQDAMLVVEKI 445
Y L L R DA ++ + I
Sbjct: 580 YGTLIDGLWRAHRENDATMLFQNI 603
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 138/341 (40%), Gaps = 50/341 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P+ V +NA+++ + +K +F + GL PS +YG+ ++ + ++ ++DL
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 388
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F+ +M ++G +G +TY ++ + G ++EAV + M + G+ Y L
Sbjct: 389 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 448
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ------HMKD 483
C GR++ A +V +I + S P I ++ LI + G + + I I++ H +D
Sbjct: 449 CKVGRFKTAKEIVCRIYRVGLS-PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 484 H----------CE--------------------PNIGTVNAMLKVYSRNDMFSKAKELFE 513
H C+ PN + + ++ Y + KA +F+
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
E T+ P +TY S+L+ E K + +D
Sbjct: 568 EMTKVGH-------------HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 614
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ LL ++G F +++ +P +T ++
Sbjct: 615 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 173/435 (39%), Gaps = 37/435 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P I Y++V + G K ++L++ M+ K ++ D+ YN ++
Sbjct: 226 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG---------------VDADVCTYNMLI 270
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S++ + + + +RK + P+ TY + GK + + +M G +
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+T+ L+ EG EA+ ME +G+ + Y L LC N + A
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 442 VEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 499
++K R+ + IT+TG+I G +D+ + + M KD +P+I T +A++ +
Sbjct: 391 YMRMK--RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 448
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
+ F AKE+ R L P+ YS+++ + +
Sbjct: 449 CKVGRFKTAKEIVCRIYRVG-------------LSPNGIIYSTLIYNCCRMGCLKEAIRI 495
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
Y+ M L G D L+ +AGK E + G +P+ + F + LI
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF-DCLINGYG 554
Query: 620 QSNYE-KAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEI 678
S KA ++ + M H T + L + + EK L +L AA +
Sbjct: 555 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 614
Query: 679 TVSNLSRALHALCRS 693
+ L L A+C+S
Sbjct: 615 MYNTL---LTAMCKS 626
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 115/278 (41%), Gaps = 15/278 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P + NA+L + V S + V+ K++ K + P AT+ + + V+ G ++
Sbjct: 154 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 213
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+KM KSG A +TY ++ + ++G+ A+ + +M+ +GV Y L L
Sbjct: 214 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C + R L++ ++ R P E+T+ LI + G + + M PN
Sbjct: 274 CRSNRIAKGYLLLRDMRK-RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T NA++ + F +A ++F + L P E +Y +L+
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMM-------------EAKGLTPSEVSYGVLLDGLC 379
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+++ Y M +G + + + ++ + G
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 158/411 (38%), Gaps = 42/411 (10%)
Query: 138 YFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLL 197
Y A +E H + VLV L + A+ +F+R M G++ L+
Sbjct: 496 YEAMILEGHTRDHF-----TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 198 KGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED 257
G G+ G +A SV D + + + F Y LL L K G EA + L+
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHH---PTFFTYGSLLKGLCKGGHLREAEKF----LKS 603
Query: 258 CNLYP---DIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKNW 306
+ P D Y+++ + + G L + V L M Q+ + I + RK
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Query: 307 DPV-------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ + P+ V+Y ++ + QWK + +Q+ G P T
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
++ + GK + ++ +M TY +L+ + + ++ + R++
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID- 472
G++ + L +C + + + +++ R + TF LI G I+
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFIC-RGVEVDRYTFNMLISKCCANGEINW 842
Query: 473 --DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
D + + + + + T +AM+ V +RN F +++ + E ++ S
Sbjct: 843 AFDLVKVMTSLGISLDKD--TCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 122/320 (38%), Gaps = 15/320 (4%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VY+ ++ + + +F+ + G PS T + +++SG+ V F ++M
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K T+ +L+ EG ++ ++ ME+ G T Y + C GR+
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
+ A+ +++ +KS + T+ LI I + + M K PN T N
Sbjct: 245 KAAIELLDHMKS-KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ +S A +L E L P+ T++++++ + ++
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFG-------------LSPNHVTFNALIDGHISEGNFK 350
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ M G + + LL + + L + + G + +T M+
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 615 IQAIVQSNYEKAVALINAMA 634
++AV L+N M+
Sbjct: 411 DGLCKNGFLDEAVVLLNEMS 430
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/459 (18%), Positives = 187/459 (40%), Gaps = 39/459 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KGL KG + +++ +G K + + Y L+ K G A ++F L
Sbjct: 214 MVKGLCLKGRIEDGIKLIESRWG---KGCVPNIVFYNTLIDGYCKKGEVESAYKLFK-KL 269
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP------- 308
+ P + + S+ ++G+ + + L+ M+ + M+ D
Sbjct: 270 KMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFD 329
Query: 309 -------------VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
EPDLV YN ++N + + + +Q + GL P+ TY
Sbjct: 330 IKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPL 389
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + G+Y ++ +M+ SG + ++Y L+ G+++ A+ M RG+
Sbjct: 390 VHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGI 449
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ A++Y L L G+ A +++ ++ ++ P + L+ + G++D+
Sbjct: 450 LPDANIYNVLMNGLFKKGKLSMAKVMLTEMLD-QNIAPDAFVYATLVDGFIRHGNLDEAK 508
Query: 476 SIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
+FQ + + +P + N M+K +S++ M A ++ RA+
Sbjct: 509 KLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHV------------- 555
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
PD +T+S++++ H ++ M C+ + + L+ R G+ + E
Sbjct: 556 PDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKL 615
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
F + G P + ++ ++ ++ KAV+ M
Sbjct: 616 FSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELM 654
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 182/444 (40%), Gaps = 47/444 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D ++ +K + + G + T L+ G G + +A+ +L + +K
Sbjct: 249 LIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMF-EAIDLL--LLEMK 305
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + +Y ++ K G +A M E+C PD+ Y+++ G +
Sbjct: 306 DRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENC-CEPDLVTYNTLINHFCSRGEV 364
Query: 281 KELVKLIERMRQK---PSKRI----------KNMHRKNWDPV-------LEPDLVVYNAV 320
+E KL+E+ ++ P+K + + K D + LE D++ Y A+
Sbjct: 365 EEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGAL 424
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
++ V + + + ++ G+ P A Y + M + + GK + +M
Sbjct: 425 IHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNI 484
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
A A Y LV F G ++EA + + ++G+ Y + +G +A+L
Sbjct: 485 APDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAIL 544
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 499
++K++ H P TF+ +I + +++ + IF M K +C+PN+ T +++ Y
Sbjct: 545 CIDKMRRAHHV-PDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGY 603
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS----SMLEASATAHQWEY 555
R A++LF + S G LKP TYS S + + Y
Sbjct: 604 CRKGETKMAEKLF---SMMRSHG----------LKPSVVTYSILIGSFCKEAKLGKAVSY 650
Query: 556 FEYVYKGMALSGCQLDQTKHAWLL 579
FE M ++ C + +L+
Sbjct: 651 FEL----MLINKCTPNDAAFHYLV 670
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 93/540 (17%), Positives = 192/540 (35%), Gaps = 75/540 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L D G +A+ V V L + L S + LL +L K R A ++++ M+
Sbjct: 139 VLCAYADVGLVDKALEVYHGVVKLHN--SLPSTYACNSLLNLLVKHRRIETAHQLYDEMI 196
Query: 256 EDCNLYPDIAA--YHSVAVTLGQV--GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ N DI Y + + G G +++ +KLIE W
Sbjct: 197 DRDN-GDDICVDNYTTSIMVKGLCLKGRIEDGIKLIE---------------SRWGKGCV 240
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P++V YN +++ + + + +FK+L+ G P+ T+G + + G ++ +
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300
Query: 372 FRKMAKSGEAIGA-----------------------------------LTYKVLVRAFWE 396
+M G ++ +TY L+ F
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G++ EA + +RG+ Y L C G + A + ++ + + I
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDM-I 419
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
++ LI + G +D ++I M + P+ N ++ + S AK + E
Sbjct: 420 SYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEM 479
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
N + PD + Y+++++ + + +++ + G +
Sbjct: 480 LDQN-------------IAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGY 526
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
++ S++G D + A +P F+ ++ + Q N + + M
Sbjct: 527 NVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVK 586
Query: 636 APFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
+T L + EKL + + + S +T S L + + C+ K
Sbjct: 587 QNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSIL---IGSFCKEAK 643
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 177/406 (43%), Gaps = 36/406 (8%)
Query: 232 TKLL-AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
TKL+ A++GK G+PHEA +F+ + E+ + P + Y ++ L
Sbjct: 64 TKLMNALIGK-GKPHEAQAVFHNLTEEGH-KPTLITYTTLVAAL---------------T 106
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RQK K I + K D ++PD ++ NA++NA S + +F+++++ G KP+ +
Sbjct: 107 RQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTS 166
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA-IGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY ++ G+ + M + TY +L++A+ + K+ EA +
Sbjct: 167 TYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHK 226
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS-MDG 468
M G+ Y +A NG + A ++ K++ KP E T G+IIS
Sbjct: 227 MVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQ-YNKVKPNERT-CGIIISGYCKE 284
Query: 469 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G++ + + MK+ PN N+++K Y L T T +
Sbjct: 285 GNMTEALRFLYRMKELGVHPNPVVFNSLIKGY-----------LDATDTNGVDEALTLME 333
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
G +KPD T+S+++ A ++A + E ++ M +G + D ++ L RAG+
Sbjct: 334 EFG--IKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQ 391
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
E S+ + G + + FT ++ ++A +L M
Sbjct: 392 PRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKM 437
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 128/325 (39%), Gaps = 65/325 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ D G +AM + + YG K + Y L+ G GRP+E++++ +
Sbjct: 136 MINAFSDSGKVDEAMKIFQKMKEYGCK-----PTTSTYNTLIKGFGIVGRPYESMKLLEM 190
Query: 254 MLEDCN-----------------------------------LYPDIAAYHSVAVTLGQVG 278
M +D N + PD+ Y+++A Q G
Sbjct: 191 MGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNG 250
Query: 279 LLKELVKLIERM---RQKPSKR------------------IKNMHRKNWDPVLEPDLVVY 317
++ +LI +M + KP++R ++ ++R + + P+ VV+
Sbjct: 251 ETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMK-ELGVHPNPVVF 309
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N+++ + + GV + + G+KP T+ M +G D E F M K
Sbjct: 310 NSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVK 369
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+G Y +L + + G+ +A + + +M + GV ++ + C G+
Sbjct: 370 AGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDR 429
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLI 462
A + EK+ + S L+ T+ LI
Sbjct: 430 AFSLCEKMHEMGTSPNLK-TYETLI 453
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 132/322 (40%), Gaps = 23/322 (7%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
VF L + G KP+ TY + + + ++ + K+A +G ++ ++ AF
Sbjct: 82 VFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFS 141
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ GK++EA+ + M++ G T S Y L GR ++M ++E + + KP +
Sbjct: 142 DSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPND 201
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF-- 512
T+ LI + +++ ++ M +P++ T N M + Y++N KA+ L
Sbjct: 202 RTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILK 261
Query: 513 ---------EETTRANSSGYTFLSGDGAPLK-----------PDEYTYSSMLEASATAHQ 552
E T SGY L+ P+ ++S+++ A
Sbjct: 262 MQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATD 321
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+ M G + D + ++ S AG E F+ +++AG P ++
Sbjct: 322 TNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSI 381
Query: 613 MLIQAIVQSNYEKAVALINAMA 634
+ + KA +L+ +M+
Sbjct: 382 LAKGYVRAGQPRKAESLLTSMS 403
>gi|255660992|gb|ACU25665.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 376
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 18/247 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK + V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKG-NRSVSSFNIMMRGLFDNGKVNEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KSG ++TY +LV F + G IN+++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + L+ + +D I +F+ M HC P
Sbjct: 140 CKEANLDKAVSVLNGMIKS--GCKPNAHVYNTLVNGLVGVSKFEDAIRVFREMGTVHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LNPGVITYSMLMKGL 244
Query: 548 ATAHQWE 554
H+ E
Sbjct: 245 CLDHKVE 251
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/303 (18%), Positives = 125/303 (41%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K ++ Y L+ K G +++L + M
Sbjct: 65 MMRGLFDNGKVNEVISIWEL---MKKSGFVEDSITYGILVHGFCKNGYINKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L + V ++ M + K P+
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCK---------------PNAH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N V +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 166 VYNTLVNGLVGVSKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + K+ A+ + +G + L LC+ G+
Sbjct: 226 LDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKM 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
Q A+ + + + P ++ L+ G I + + I+ +++ EP+I + N
Sbjct: 286 QLALSLYFDMNRWK-CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNI 344
Query: 495 MLK 497
LK
Sbjct: 345 TLK 347
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 176/422 (41%), Gaps = 46/422 (10%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+L+ L + GRP +A R+ +E C Y ++A +VG L E ++++ M
Sbjct: 93 RLVRDLCRRGRPADAARV----VEACGSAATAVTYSALADGYCRVGRLDEARRVVDGMPV 148
Query: 293 KPSKRIKN--MHRKN-----------WDPVL----EPDLVVYNAVLNACVPSHQWKGVFW 335
PS N MH D +L PD+V YN +L A ++
Sbjct: 149 LPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAME 208
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ +R G P+ TY + M+ M + G D E + G + Y +++
Sbjct: 209 LIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLR 268
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G+ + + M + + + LC G +Q A+ ++EK+ +H
Sbjct: 269 TAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMS--KHDCTAN 326
Query: 456 I-TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
I T+ ++ + GH+D + + +M+ D C+PNI T N ++K + + A++L
Sbjct: 327 IVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMA 386
Query: 514 ETTRAN--------SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+ ++ + ++ FL G ++ E + M E + Y V +G+A
Sbjct: 387 KMSQTDCLPDILTFNTIIGFLCQKGLTMQAVE-VFKQMPEKGCCPNSVTY-SSVIEGLAK 444
Query: 566 SGCQLDQTKHAWLLVEASRAG-----KCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQA 617
+G +++Q+ LL E G HLL D L+EA ++ H L T + QA
Sbjct: 445 TG-KMEQSLE--LLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQA 501
Query: 618 IV 619
++
Sbjct: 502 VL 503
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 113/530 (21%), Positives = 211/530 (39%), Gaps = 89/530 (16%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAI------LGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
D V L+ +K++ + ++A L KAGR EA +IF L+D L PD Y
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF-YGLKDIGLVPDSVTY 506
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ + +VG + E +KL+ M + EPD++V N+++N +
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGC---------------EPDVIVVNSLINTLYKA 551
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + +F ++++ LKP+ TY + + ++GK E F M + G +T+
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L + ++ A+ + M G V Y + L NG+ ++AM ++K
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC---------EPNIGTVNA---- 494
L + P +T L+ + I+D I + +C E IG++ A
Sbjct: 672 LVY--PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGI 729
Query: 495 -------------------------MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+++ +++ S A+ LFE+ T+
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK------------ 777
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
++P TY+ ++ A E + V+ + +GC D + +LL ++GK
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 590 LLEHAFDSL----LEAGEIPHPLFFTEMLIQAIVQS-NYEKAVAL-INAMAYAPFHITER 643
L + + EA I H ++I +V++ N + A+ L + M+ F T
Sbjct: 838 ELFELYKEMSTHECEANTITH-----NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTAC 892
Query: 644 QWTELFE--SNEDRISRDK--LEKLLNALCNCNAASSEITVSNLSRALHA 689
+ L + S R+ K E +L+ C N A I ++ +A A
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 189/463 (40%), Gaps = 47/463 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GLG + M +L + L K ++ + +T + +LG+AG+ +EA I M
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKPNV---YTFTICIRVLGRAGKINEAYEILKRM- 284
Query: 256 EDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSK--RIKNMHR----KNW 306
+D PD+ Y + T ++ KE+ + ++ R KP + I + R ++
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 307 DPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D V + PD+V + +++A + + F +R G+ P+ TY
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ +L+ + D E F M G A TY V + + + G A+ M+ +G+
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 416 ----VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
V + Y LA GR ++A + +K + P +T+ ++ G I
Sbjct: 465 APNIVACNASLYSLA----KAGRDREAKQIFYGLKDIGLV-PDSVTYNMMMKCYSKVGEI 519
Query: 472 DDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
D+ I + + M++ CEP++ VN+++ + D +A ++F
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK----------- 568
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
LKP TY+++L + + +++GM GC + L + + L
Sbjct: 569 --LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+++ G +P + ++ + ++A+ + M
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 165/406 (40%), Gaps = 53/406 (13%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK---SRFVYTKLLAILGKAGRPHEALRI 250
L + K L KG +QA Y L+ R+ + + Y L+ +L K+ EA+ +
Sbjct: 157 LTIFKSLSVKGGLKQA------PYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEV 210
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVKLIERMRQKP--------- 294
+ M+ + P + Y S+ V LG+ +GLLKE+ E + KP
Sbjct: 211 YRRMILE-GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM----ETLGLKPNVYTFTICI 265
Query: 295 -----SKRIKNMH---RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +I + ++ D PD+V Y +++A + + VF++++ K
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P TY ++ + D V +F+ +M K G +T+ +LV A + G EA
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M +G++ Y L C L R DA+ + ++SL KP T+ I
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL-GVKPTAYTYIVFIDYYG 444
Query: 467 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G + F+ MK PNI NA L ++ +AK++F
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG------ 498
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
L PD TY+ M++ + + + + M +GC+ D
Sbjct: 499 -------LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 23/292 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +A A +F L ++ PD+A Y+ + G+ G + EL +L + M
Sbjct: 788 YNLLIGGLLEADMIEIAQDVF-LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 291 RQKPSKRIKNMHR---------KNWDPVLE------------PDLVVYNAVLNACVPSHQ 329
+ H N D L+ P Y +++ S +
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+F+ + G +P+ A Y + + ++G+ D F++M K G TY V
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
LV G+++E + + +++ G+ Y + L + R ++A+++ ++K+ R
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
P T+ LI++ G +++ I+ + + EPN+ T NA+++ YS
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 95/507 (18%), Positives = 188/507 (37%), Gaps = 80/507 (15%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E + + L++ L + + + WK M + L T LL GLG G +
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 208 QAMSV--------------------------------LDWVYGLKDKRDLKSRFVYTKLL 235
+A+ + L ++ + D + F Y ++
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
L K G+ EA+ F+ M + +YPD ++ + + L+++ K+I +
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKK--LVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCA 708
Query: 296 KRIKNMHRKNWDPVLEPDL--------------VVYNAVL----NACVPSHQWK------ 331
+ N+ W+ ++ L +V N + + VP ++
Sbjct: 709 DQPANLF---WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNV 765
Query: 332 -GVFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
G +F++ K G++P TY L + +L++ ++ + F ++ +G TY
Sbjct: 766 SGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNF 825
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ A+ + GKI+E + M + + L G DA+ + + S R
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 508
P T+ LI G + + +F+ M D+ C PN N ++ + + A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
LF+ + ++PD TYS +++ + + + +K + SG
Sbjct: 946 CALFKRMVKEG-------------VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAF 595
D + ++ + GK H LE A
Sbjct: 993 NPDVVCYNLII---NGLGKSHRLEEAL 1016
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 135/345 (39%), Gaps = 17/345 (4%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D ++P L YN ++ + + + VF Q++ +G P ATY ++ +SGK D
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN-MEQRGVVGTASVYYEL 425
+ E +++M+ +T+ +++ + G +++A+ + M R TA Y L
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDH 484
L +GR +A + E + +P + LI G D ++F+ M K+
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDY-GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
P++ T + ++ + F+E + L PD Y+ ++
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG-------------LNPDVVCYNLII 1003
Query: 545 EASATAHQWEYFEYVYKGMALS-GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
+H+ E ++ M S G D + L++ AG ++ + AG
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 604 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
P+ F ++ + E A A+ M F + +L
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 32/255 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLM 254
++ GL G+ A LD Y L RD + Y L+ L K+GR +EA ++F M
Sbjct: 861 VISGLVKAGNVDDA---LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRI------------- 298
L D P+ A Y+ + G+ G L +RM + +P +
Sbjct: 918 L-DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 299 --KNMH--RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYG 353
+ +H ++ + L PD+V YN ++N SH+ + +F +++ S G+ P TY
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 354 LAMEVMLQSGKYDLVHE---FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
++L G +V E + ++ ++G T+ L+R + GK A A + M
Sbjct: 1037 ---SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 411 EQRGVVGTASVYYEL 425
G Y +L
Sbjct: 1094 VTGGFSPNTGTYEQL 1108
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 128/303 (42%), Gaps = 18/303 (5%)
Query: 334 FWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
F FK + + L + T +E + GK + + F M K TY + +
Sbjct: 102 FSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFK 161
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
+ +G + +A A+R M + G V A Y L L + +AM V ++ L +
Sbjct: 162 SLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM-ILEGFR 220
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P T++ L++ ID + + + M+ +PN+ T ++V R K E
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA---GKINEA 277
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+E R + G PD TY+ +++A TA + + + V++ M + D
Sbjct: 278 YEILKRMDDEG----------CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS-NYEKAVALI 630
+ + LL S ++ + + + G +P + FT +L+ A+ ++ N+ +A +
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT-ILVDALCKAGNFGEAFDTL 386
Query: 631 NAM 633
+ M
Sbjct: 387 DVM 389
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 151/361 (41%), Gaps = 47/361 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R AM VL + GL + ++ +Y+ ++ L K +A +++ ML
Sbjct: 90 LIDGLCKAGETRAAMQVLRNIDGLLVQPNV---VMYSTIIYSLCKDKLVIDAFDLYSQML 146
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--------------------RQKPS 295
+ PD+ Y+++ VG LKE V L +M ++
Sbjct: 147 LK-RISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEM 205
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K+ +N+ ++PD++ YN++++ Q +VF + + G+ P +Y +
Sbjct: 206 KKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVM 265
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + ++ D ++M A +TY L+ + G+I +A V M RG
Sbjct: 266 INGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQ 325
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI------------- 462
Y L LC N + A+ ++ KIK + +P T+T L+
Sbjct: 326 PADVITYNSLLDALCKNHQVDKAITLLTKIKD-QGIQPDIYTYTILVDGLCKNGRLKDAQ 384
Query: 463 ----ISSMDGGHIDD----CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
I + G H+D +S+ M+D+ C PN T +++ NDM KA EL
Sbjct: 385 EVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLR 444
Query: 514 E 514
E
Sbjct: 445 E 445
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 174/409 (42%), Gaps = 55/409 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KAG A+++ ++ + P++ Y ++ +L + L+ + L +M
Sbjct: 87 YGTLIDGLCKAGETRAAMQVLR-NIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQM 145
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K RI PD++ YN ++ C+ + K +F Q+ +KP
Sbjct: 146 LLK---RI------------SPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIY 190
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + ++ + + G+ M K +TY L+ ++ + N+A M
Sbjct: 191 TFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTM 250
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+RGV Y + LC +A+ +++++ S + P +T++ LI G
Sbjct: 251 ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHS-KSMAPNTVTYSSLIDGLHKSGR 309
Query: 471 IDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
I D + M + +P ++ T N++L +N KA L T+ G
Sbjct: 310 IFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLL---TKIKDQG------- 359
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
++PD YTY+ +++ + + + VY+ + + G LD
Sbjct: 360 ---IQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDS----------------- 399
Query: 590 LLEHAFDSLL----EAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 633
L + A SLL + G P+P+ F E+LI+A+ +++ +KAV L+ M
Sbjct: 400 LFDKAL-SLLSKMEDNGCTPNPVTF-EILIRALFENDMNDKAVELLREM 446
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 45/262 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL +G ++A +VL + +K D Y L+ + ++A +FN M
Sbjct: 195 LVDGLCKEGEMKKARNVLAVM--IKQSVD-PDVITYNSLMDGYFLVKQENKATFVFNTMA 251
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN-- 305
+ PD+ +Y + L + ++ E V L++ M K S I +H+
Sbjct: 252 RR-GVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRI 310
Query: 306 ---WDPVLE-------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
WD V E D++ YN++L+A +HQ + +++ G++P TY +
Sbjct: 311 FDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTIL 370
Query: 356 MEVMLQSGK---------------------YDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
++ + ++G+ +D KM +G +T+++L+RA
Sbjct: 371 VDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRAL 430
Query: 395 WEEGKINEAVAAVRNMEQRGVV 416
+E ++AV +R M RG++
Sbjct: 431 FENDMNDKAVELLREMIARGLL 452
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/275 (17%), Positives = 108/275 (39%), Gaps = 21/275 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY---DLV 368
P + + + + V + + V + Q+ G++ + + G+ D V
Sbjct: 6 PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65
Query: 369 HE---FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
E F + G + ++Y L+ + G+ A+ +RN++ V +Y +
Sbjct: 66 KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDH 484
LC + DA + ++ L+ P IT+ L+ + G + + + +F Q + +
Sbjct: 126 IYSLCKDKLVIDAFDLYSQM-LLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKN 184
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+P+I T N ++ + KA+ + + + + PD TY+S++
Sbjct: 185 IKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQS-------------VDPDVITYNSLM 231
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ Q +V+ MA G D ++ ++
Sbjct: 232 DGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMI 266
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 167/391 (42%), Gaps = 34/391 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV--KLI 287
V+ ++ + ++GR +A ++ + M D ++ PD+ +++++ + G L V +L+
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDAM-RDQDIEPDLVSFNTLINARAKSGCLAAGVALELL 281
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD + YN +++AC VF+++ S +P
Sbjct: 282 HEVRQAG---------------LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP 326
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + V + GK F+++ + G A+TY L+ AF +EG +
Sbjct: 327 DLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVC 386
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ + G Y + GR A+ + ++++++ P +T+T L+ S
Sbjct: 387 EELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAI-GCTPDAVTYTVLVDSLGK 445
Query: 468 GGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
I + + + M D +P + T +A++ Y+++ A+ F+ R SG
Sbjct: 446 MDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFD---RMVESG---- 498
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+KPD Y ML+ A + + +Y+ M G + D + LL ++
Sbjct: 499 ------VKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGN 552
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+ +E + E+ +PL + +LI+A
Sbjct: 553 EHDEIEGVIQDMEAVFEM-NPLVISSILIKA 582
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 148/341 (43%), Gaps = 17/341 (4%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D ++NA+++A S ++ +F + K G P+ + M ++ G+ D ++
Sbjct: 781 DRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVV 840
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+++ I T +++ AF + G + E + M+ G + +Y + LC+N
Sbjct: 841 QELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHN 900
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGT 491
R++D L+V +++ KP + L++ G+ D I ++ ++ EP+ T
Sbjct: 901 KRFRDVELMVAEMEGAGF-KPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDT 959
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA-PLKPDEYTYSSMLEASATA 550
N ++ +YSRN F G+T L G L P +Y +L AS A
Sbjct: 960 YNTLIVMYSRN---------FRP-----EEGFTLLYEMGKRGLTPKLESYKILLAASGKA 1005
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
WE + +++ M G +L+++ + ++ A EH ++ E G P
Sbjct: 1006 KLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATM 1065
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
++ + ++A ++N++ + I+ ++ + ++
Sbjct: 1066 HILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDA 1106
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 18/319 (5%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWK-GV-FWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
D +EPDLV +N ++NA S GV + ++R++GL+P A TY + Q
Sbjct: 249 DQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSN 308
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
D F +M S TY +V GK EA + + ++G A Y
Sbjct: 309 LDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNS 368
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 483
L G + V E++ K IT+ +I G +D + ++ M+
Sbjct: 369 LLYAFAKEGDVERVERVCEELVKAGFRKD-GITYNTMIHMYGKMGRLDLALGLYDEMRAI 427
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
C P+ T ++ + D S+A ++ EE A LKP T+S++
Sbjct: 428 GCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAG-------------LKPTLVTFSAL 474
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
+ A A + + + E + M SG + D+ + +L +R+ + L + ++++ G
Sbjct: 475 ICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGY 534
Query: 604 IPHPLFFTEMLIQAIVQSN 622
P + ++L+ A+ + N
Sbjct: 535 KPDDGLY-QVLLAALAKGN 552
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 108/251 (43%), Gaps = 19/251 (7%)
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
L + F + A+ G + + ++ + G+ ++A + M + + + L
Sbjct: 206 LAEDVFLRFAREGATVQ--VFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLI 263
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KD 483
+G A + +E + +R + +P IT+ LI + G ++DD +++F+ M
Sbjct: 264 NARAKSGCLA-AGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIAS 322
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
C P++ T NAM+ V+ R +A+ +F+E +PD TY+S+
Sbjct: 323 ECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG-------------FQPDAVTYNSL 369
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
L A A E E V + + +G + D + ++ + G+ L +D + G
Sbjct: 370 LYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGC 429
Query: 604 IPHPLFFTEML 614
P + +T ++
Sbjct: 430 TPDAVTYTVLV 440
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 132/328 (40%), Gaps = 20/328 (6%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG--KYDLVHEFFR 373
V+NA++ S ++ + +R ++P ++ + +SG + E
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLH 282
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
++ ++G A+TY L+ A + +++AVA M Y + G
Sbjct: 283 EVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCG 342
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 492
+ Q+A L+ +++ + +P +T+ L+ + G ++ + + + K + T
Sbjct: 343 KAQEAELMFKELVE-KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITY 401
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N M+ +Y + A L++E + G T PD TY+ ++++ +
Sbjct: 402 NTMIHMYGKMGRLDLALGLYDEM---RAIGCT----------PDAVTYTVLVDSLGKMDR 448
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
V + MA +G + + L+ +++G+ E FD ++E+G P L +
Sbjct: 449 ISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLV 508
Query: 613 MLIQAIVQSNYEKAVALINAM---AYAP 637
ML K + L AM Y P
Sbjct: 509 MLDVFARSDETRKLMVLYRAMIKDGYKP 536
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 16/185 (8%)
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK--AKELFE 513
F ++ G DD + M+D EP++ + N ++ +++ + A EL
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLH 282
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
E +A L+PD TY++++ A + + V++ M S C+ D
Sbjct: 283 EVRQAG-------------LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLW 329
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ ++ R GK E F L+E G P + + +L + + E+ + +
Sbjct: 330 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 389
Query: 634 AYAPF 638
A F
Sbjct: 390 VKAGF 394
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 62/349 (17%), Positives = 143/349 (40%), Gaps = 31/349 (8%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+ +++ G W+QA ++V GLK + + R ++ L+ ++G A IF++
Sbjct: 752 VAMIEAYGKLKLWQQAE---NFVKGLKQESGVDRR-IWNALIHAYAESGLYEHARAIFDI 807
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM-------HRKNW 306
M++ L P + + + + L G L EL +++ ++ K K+ K
Sbjct: 808 MIKKGPL-PTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAG 866
Query: 307 DPVLE--------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
D V E P++ +Y +++ + +++ V + ++ +G KP
Sbjct: 867 D-VFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVL 925
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ + +G +D E + + ++G TY L+ + + E + M +
Sbjct: 926 NTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGK 985
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGH 470
RG+ Y L W+ A L+ E++ K R ++ + + ++ +
Sbjct: 986 RGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSK 1045
Query: 471 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+ +S + +D EP I T++ ++ Y + +A+++ +N
Sbjct: 1046 AEHLLSAMK--EDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSN 1092
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 122/325 (37%), Gaps = 41/325 (12%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L KAG E ++I+N M + P++ Y + L +++ ++ M
Sbjct: 858 MLEAFAKAGDVFEVMKIYNGM-KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGA 916
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K PDLVV N +L + + V+ + ++GL+P TY
Sbjct: 917 GFK---------------PDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYN 961
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA-----FWEEGKINEAVAAVR 408
+ + ++ + + +M K G +YK+L+ A WE+ +
Sbjct: 962 TLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADL-----LFE 1016
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +G S+Y+ + N A ++ +K +P T L+ S
Sbjct: 1017 EMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKE-DGIEPTIATMHILMTSYGTS 1075
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
GH D+ + +K + E + + +L Y RN +S E R
Sbjct: 1076 GHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKR---------- 1125
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQ 552
DG ++PD ++S + A++ Q
Sbjct: 1126 -DG--VEPDHQVWTSFIRAASLCEQ 1147
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 18/235 (7%)
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E F K K + + L+ A+ E G A A M ++G + T + L
Sbjct: 768 ENFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRAL 827
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PN 488
+GR + +VV++++ L K + T ++ + G + + + I+ MK PN
Sbjct: 828 IVDGRLDELYVVVQELQDL-DIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPN 886
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ M+ + N F + + E +GA KPD +++L
Sbjct: 887 MHLYRIMISLLCHNKRFRDVELMVAEM-------------EGAGFKPDLVVLNTLLLMYT 933
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
++ VY + +G + D+ + L+V SR + E F L E G+
Sbjct: 934 GTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP---EEGFTLLYEMGK 985
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 157/381 (41%), Gaps = 53/381 (13%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK---SRFVYTKLLAILGKAGRPHEALRI 250
L + K L KG RQA + L+ R+ + + Y L+ +L K+ EA+ +
Sbjct: 159 LTIFKCLSVKGGLRQA------PFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEV 212
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVKLIERMRQKP--------- 294
+ M+ D P + Y S+ V LG+ +GLLKE+ E + KP
Sbjct: 213 YRRMILD-GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEM----ETLGLKPNVYTFTICI 267
Query: 295 -----SKRIKNMH---RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +I + ++ D PD+V Y +++A + + VF +++ K
Sbjct: 268 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHK 327
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P TY ++ + D V++F+ +M K G +T+ +LV A + G EA A
Sbjct: 328 PDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAK 387
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M +G++ Y L C L R DA+ + + ++SL KP T+ I
Sbjct: 388 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESL-GVKPTAYTYIVFIDYYG 446
Query: 467 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G + F+ MK PNI NA L ++ +AK++F
Sbjct: 447 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG------ 500
Query: 526 LSGDGAPLKPDEYTYSSMLEA 546
L PD TY+ M++
Sbjct: 501 -------LVPDSVTYNMMMKC 514
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 24/278 (8%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAI------LGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
D V L+ +K++ + ++A L KAGR EA +IF L+D L PD Y
Sbjct: 450 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF-YGLKDIGLVPDSVTY 508
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ + +VG + E +KL+ M + EPD++V N+++N +
Sbjct: 509 NMMMKCYSKVGEIDEAIKLLSEMVEN---------------CCEPDVIVVNSLINTLYKA 553
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + +F ++++ LKP+ TY + + ++GK E F M + G +T+
Sbjct: 554 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 613
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L + ++ A+ + M G V Y + L NG+ ++AM ++K
Sbjct: 614 NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 673
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC 485
L + P +T L+ + G I+D I + C
Sbjct: 674 LVY--PDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSC 709
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 145/341 (42%), Gaps = 35/341 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +A A +F L +++ PD+A Y+ + G+ G + EL ++ + M
Sbjct: 790 YNLLIGGLLEADMIEIAQDVF-LQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM 848
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSA 349
EP+ + +N V++ V + ++ L P+A
Sbjct: 849 SAHEC---------------EPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 893
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TYG ++ + +SG+ + F M+ G Y +L+ F + G+ + A A +
Sbjct: 894 CTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKR 953
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + GV Y L CLC GR + + ++K P ++ LII+ +
Sbjct: 954 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKE-SGLNP-DVVCYNLIINGLGKF 1011
Query: 470 H-IDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
H +++ + +F MK P++ T N+++ M +A +++ E RA
Sbjct: 1012 HRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG------- 1064
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
L+P+ +T+++++ + + + E+ VY+ M G
Sbjct: 1065 ------LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1099
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/507 (18%), Positives = 189/507 (37%), Gaps = 80/507 (15%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E + + L++ L + + + WK M + L T LL GLG G +
Sbjct: 533 ENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 592
Query: 208 QAMSV--------------------------------LDWVYGLKDKRDLKSRFVYTKLL 235
+A+ + L ++ + D + F Y ++
Sbjct: 593 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 652
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
L K G+ EA+ F+ M + +YPD ++ + + GL+++ K+I +
Sbjct: 653 FGLVKNGQVKEAMCFFHQMKK--LVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCA 710
Query: 296 KRIKNMHRKNWDPVLEPDL--------------VVYNAVL----NACVPSHQWK------ 331
+ N+ W+ ++ L +V N + + VP ++
Sbjct: 711 DQPANLF---WEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNA 767
Query: 332 -GVFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
G +F++ K G++P TY L + +L++ ++ + F ++ +G TY
Sbjct: 768 SGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNF 827
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ A+ + GKI+E + M + + L G DA+ + + S R
Sbjct: 828 LLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDR 887
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 508
P T+ LI G + + +F+ M D+ C PN N ++ + + A
Sbjct: 888 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAA 947
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
LF+ + ++PD TYS +++ + + + ++ + SG
Sbjct: 948 CALFKRMVKEG-------------VRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGL 994
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAF 595
D + ++ + GK H LE A
Sbjct: 995 NPDVVCYNLII---NGLGKFHRLEEAL 1018
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLM 254
++ GL G+ A LD Y L RD + Y L+ L K+GR +EA ++F M
Sbjct: 863 VISGLVKAGNVDDA---LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 919
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRI------------- 298
D P+ A Y+ + G+ G L +RM + +P +
Sbjct: 920 -SDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 978
Query: 299 --KNMH--RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYG 353
+ +H R+ + L PD+V YN ++N H+ + +F +++KS G+ P TY
Sbjct: 979 VDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYN 1038
Query: 354 LAMEVMLQSGKYDLVHE---FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
++L G +V E + ++ ++G T+ L+R + GK A A + M
Sbjct: 1039 ---SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1095
Query: 411 EQRGVVGTASVYYEL 425
G Y +L
Sbjct: 1096 VTGGFSPNTGTYEQL 1110
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 135/345 (39%), Gaps = 17/345 (4%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D ++P L YN ++ + + + VF Q++ +G P ATY ++ +SGK D
Sbjct: 780 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKID 839
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN-MEQRGVVGTASVYYEL 425
+ E +++M+ +T+ +++ + G +++A+ + M R TA Y L
Sbjct: 840 ELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 899
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDH 484
L +GR +A + E + S +P + LI G D ++F+ M K+
Sbjct: 900 IDGLSKSGRLYEAKQLFEGM-SDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 958
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
P++ T + ++ M + E SG L PD Y+ ++
Sbjct: 959 VRPDLKTYSVLVDCLC---MVGRVDEGLHYFRELKESG----------LNPDVVCYNLII 1005
Query: 545 EASATAHQWEYFEYVYKGMALS-GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
H+ E ++ M S G D + L++ AG ++ + AG
Sbjct: 1006 NGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1065
Query: 604 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
P+ F ++ + E A A+ M F + +L
Sbjct: 1066 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 156/419 (37%), Gaps = 95/419 (22%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ + + L + G E ++ MR D + P+L YN ++
Sbjct: 363 PDVVTFTILVDALCKAGNFGEAFAKLDVMR---------------DQGILPNLHTYNTLI 407
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ H+ +F + G+KP+A TY + ++ +SG E F KM G A
Sbjct: 408 CGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 467
Query: 382 -------------------------------IG----ALTYKVLVRAFWEEGKINEAVAA 406
IG ++TY ++++ + + G+I+EA+
Sbjct: 468 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 527
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M + V L L R +A + ++K ++ KP +T+ L+
Sbjct: 528 LSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL-KPTVVTYNTLLAGLG 586
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA-KELFEETTRANSSGYT 524
G I + I +F+ M + C PN T N + +ND + A K LF+
Sbjct: 587 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG------ 640
Query: 525 FLSGDGAPLKPDEYTYSSML----------EASATAHQWEYFEYVYKGMALSGCQLDQTK 574
PD +TY++++ EA HQ + Y D
Sbjct: 641 --------CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-----------DFVT 681
Query: 575 HAWLLVEASRAGKCHLLEHAF----DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
LL +AG L+E A+ + L + P LF+ +++ + ++ + AV+
Sbjct: 682 LCTLLPGVVKAG---LIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSF 737
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 126/303 (41%), Gaps = 18/303 (5%)
Query: 334 FWVFKQLR-KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
F FK + S L + T +E + GK + + F M K TY + +
Sbjct: 104 FSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFK 163
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
+G + +A A+R M + G V A Y L L + +AM V ++ L +
Sbjct: 164 CLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM-ILDGFR 222
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P T++ L++ I+ + + + M+ +PN+ T ++V R K E
Sbjct: 223 PSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRA---GKINEA 279
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+E R + G PD TY+ +++A TA + + + V+ M + D
Sbjct: 280 YEILKRMDDEG----------CGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPD 329
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS-NYEKAVALI 630
+ + LL S + + + + G +P + FT +L+ A+ ++ N+ +A A +
Sbjct: 330 RVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFT-ILVDALCKAGNFGEAFAKL 388
Query: 631 NAM 633
+ M
Sbjct: 389 DVM 391
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 165/406 (40%), Gaps = 41/406 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P +V YN ++N S+ +F++L + G P TY ++ + ++G +
Sbjct: 33 VAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEAR 92
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG--VVGTASVYYELAC 427
M+ G +TY VL+ + G+I+EA ++ M ++ V+ Y
Sbjct: 93 RLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 152
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHS----KPLEITFTGLIISSMDGGHIDDCISIFQHM-K 482
LC +A E ++SLR P +TF+ LI G ID+ S+F M
Sbjct: 153 GLCKQSMTAEA---CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIA 209
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
PN+ T NA++ + D +A + E G T PD TYS
Sbjct: 210 GGYVPNVITYNALVNGLCKADKMERAHAMIESMV---DKGVT----------PDVITYSV 256
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQ-----LDQTKHAWLLVEASRAGKCHLLEHAFDS 597
+++A A + + + GMA GC D+ L+ A +AG F+
Sbjct: 257 LVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEE 316
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSNYEKA----VALINAMAYAPFHITERQWTE-LFESN 652
++ P + F LI + ++ +A + L+ + P +T L +S
Sbjct: 317 MVAKNLQPDVMTFGA-LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375
Query: 653 EDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
+ LE+++++ C IT +L ++ALCR+ + D
Sbjct: 376 RIEEACQFLEEMVSSGC----VPDSITYGSL---VYALCRASRTDD 414
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 146/364 (40%), Gaps = 34/364 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KAG EA R+ M P++ Y + L +VG + E +LI+ M
Sbjct: 75 YNTLIDSLCKAGDLEEARRLHGDMSSR-GCVPNVVTYSVLINGLCKVGRIDEARELIQEM 133
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK--PS 348
RK+ D + P+++ YN+ L+ + + LR L+ P
Sbjct: 134 T-----------RKSCDVL--PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ ++ + + G+ D F M G +TY LV + K+ A A +
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK----PLEITFTGLIIS 464
+M +GV Y L C R +A+ ++ + S + P ++TF LI
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300
Query: 465 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ G+ + ++F+ M + +P++ T A++ + A+++ +
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD---------- 350
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+ G P P+ TY++++ + + E + M SGC D + L+
Sbjct: 351 -LMGNLGVP--PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 407
Query: 584 RAGK 587
RA +
Sbjct: 408 RASR 411
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 154/389 (39%), Gaps = 33/389 (8%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQML--KLLKGLGDKGSWRQAMSVLDWVYG 218
+D L ++ MTA+ + +R + L + + L+ GL G +A SV D +
Sbjct: 150 FLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIA 209
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + Y L+ L KA + A + M+ D + PD+ Y + +
Sbjct: 210 ---GGYVPNVITYNALVNGLCKADKMERAHAMIESMV-DKGVTPDVITYSVLVDAFCKAS 265
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E ++L+ M R VL PD V +N ++ + ++ +F+
Sbjct: 266 RVDEALELLHGMAS----------RGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFE 315
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
++ L+P T+G ++ + ++G+ + + M G +TY LV + G
Sbjct: 316 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+I EA + M G V + Y L LC R DA+ +V ++KS P +T+
Sbjct: 376 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW-DPDTVTY 434
Query: 459 TGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
L+ G + I++ + M K H +P+ T A R+ + EL
Sbjct: 435 NILVDGLWKSGKTEQAITVLEEMVGKGH-QPDSFTFAACFSGLHRSGNLAGTMELLRVVL 493
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+ PD T SS+L+
Sbjct: 494 AKG-------------MLPDATTCSSILD 509
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/251 (17%), Positives = 105/251 (41%), Gaps = 19/251 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G++ QA ++ + + + D+ + + L+ L KAG+ A I +LM
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMT---FGALIDGLCKAGQVEAARDILDLM- 352
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P++ Y+++ L + G ++E + +E M PD +
Sbjct: 353 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV---------------PDSI 397
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y +++ A + + + +L+ G P TY + ++ + +SGK + +M
Sbjct: 398 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 457
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G + T+ G + + +R + +G++ A+ + +C +G+
Sbjct: 458 VGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKL 517
Query: 436 QDAMLVVEKIK 446
D ++++ +
Sbjct: 518 DDVKAMIKEFE 528
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 138/341 (40%), Gaps = 50/341 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P+ V +NA+++ + +K +F + GL PS +YG+ ++ + ++ ++DL
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 428
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F+ +M ++G +G +TY ++ + G ++EAV + M + G+ Y L
Sbjct: 429 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ------HMKD 483
C GR++ A +V +I + S P I ++ LI + G + + I I++ H +D
Sbjct: 489 CKVGRFKTAKEIVCRIYRVGLS-PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547
Query: 484 H----------CE--------------------PNIGTVNAMLKVYSRNDMFSKAKELFE 513
H C+ PN + + ++ Y + KA +F+
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 607
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
E T+ P +TY S+L+ E K + +D
Sbjct: 608 EMTKVGH-------------HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 654
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ LL ++G F +++ +P +T ++
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 173/435 (39%), Gaps = 37/435 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P I Y++V + G K ++L++ M+ K ++ D+ YN ++
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG---------------VDADVCTYNMLI 310
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S++ + + + +RK + P+ TY + GK + + +M G +
Sbjct: 311 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 370
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+T+ L+ EG EA+ ME +G+ + Y L LC N + A
Sbjct: 371 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 430
Query: 442 VEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 499
++K R+ + IT+TG+I G +D+ + + M KD +P+I T +A++ +
Sbjct: 431 YMRMK--RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
+ F AKE+ R L P+ YS+++ + +
Sbjct: 489 CKVGRFKTAKEIVCRIYRVG-------------LSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
Y+ M L G D L+ +AGK E + G +P+ + F + LI
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF-DCLINGYG 594
Query: 620 QSNYE-KAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEI 678
S KA ++ + M H T + L + + EK L +L AA +
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 654
Query: 679 TVSNLSRALHALCRS 693
+ L L A+C+S
Sbjct: 655 MYNTL---LTAMCKS 666
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 113/271 (41%), Gaps = 15/271 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P + NA+L + V S + V+ K++ K + P AT+ + + V+ G ++
Sbjct: 194 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 253
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+KM KSG A +TY ++ + ++G+ A+ + +M+ +GV Y L L
Sbjct: 254 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 313
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C + R L++ ++ R P E+T+ LI + G + + M PN
Sbjct: 314 CRSNRIAKGYLLLRDMRK-RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T NA++ + F +A ++F + L P E +Y +L+
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMM-------------EAKGLTPSEVSYGVLLDGLC 419
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+++ Y M +G + + + ++
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 152/389 (39%), Gaps = 37/389 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLV L + A+ +F+R M G++ L+ G G+ G +A SV D + +
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 612
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP---DIAAYHSVAVTLGQ 276
+ F Y LL L K G EA + L+ + P D Y+++ + +
Sbjct: 613 GHH---PTFFTYGSLLKGLCKGGHLREAEKF----LKSLHAVPAAVDTVMYNTLLTAMCK 665
Query: 277 VGLLKELVKLIERMRQKP--------SKRIKNMHRKNWDPV-------------LEPDLV 315
G L + V L M Q+ + I + RK + + P+ V
Sbjct: 666 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 725
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+Y ++ + QWK + +Q+ G P T ++ + GK + ++ +M
Sbjct: 726 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
TY +L+ + + ++ + R++ G++ + L +C +
Sbjct: 786 GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 845
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID---DCISIFQHMKDHCEPNIGTV 492
+ + +++ R + TF LI G I+ D + + + + + T
Sbjct: 846 EIGLKILKAFIC-RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD--TC 902
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSS 521
+AM+ V +RN F +++ + E ++ S
Sbjct: 903 DAMVSVLNRNHRFQESRMVLHEMSKQGIS 931
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 56/300 (18%), Positives = 115/300 (38%), Gaps = 15/300 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F+ + G PS T + +++SG+ V F ++M K T+ +L+
Sbjct: 185 IFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLC 244
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
EG ++ ++ ME+ G T Y + C GR++ A+ +++ +KS +
Sbjct: 245 AEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADV 303
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+ LI I + + M K PN T N ++ +S A +L E
Sbjct: 304 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 363
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
L P+ T++++++ + ++ ++ M G +
Sbjct: 364 MLSFG-------------LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ LL + + L + + G + +T M+ ++AV L+N M+
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
>gi|255660964|gb|ACU25651.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 376
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDRALYVLTGMIKS--GCKPNIHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ + +MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLISGLCKKEMFGEAYNLVKELLDKG-------------LDPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/297 (18%), Positives = 117/297 (39%), Gaps = 19/297 (6%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E E + ++ +LV + K+ + + Q G + ++ GL +
Sbjct: 83 ELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKE 142
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
+ +A+ VL + K ++ VY L+ L A + +A+R+F M + P
Sbjct: 143 ANLDRALYVLTGMIKSGCKPNIH---VYNTLINGLVGASKFEDAIRVFREM-GTMHCSPT 198
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
I Y+++ L + + E L++ + K L+P ++ Y+ ++
Sbjct: 199 IITYNTLISGLCKKEMFGEAYNLVKELLDKG---------------LDPGVITYSMLMKG 243
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
H+ + ++ Q+ G KP + + + + GK L + M + A
Sbjct: 244 LCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRRKCAPN 303
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+++ L+ F+++G I A+ + + G+ Y LC+ R DA+L
Sbjct: 304 LVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P++ VYN ++N V + +++ VF+++ P+ TY + + + + +
Sbjct: 161 KPNIHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLISGLCKKEMFGEAYN 220
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+++ G G +TY +L++ + K+ A+ + +G ++ L LC
Sbjct: 221 LVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLC 280
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNI 489
+ G+ Q A+ + + R P ++ L+ G I + + I+ +++ EP+I
Sbjct: 281 SVGKMQLALSLYFDMNR-RKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDI 339
Query: 490 GTVNAMLK 497
+ N LK
Sbjct: 340 ISYNITLK 347
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 179/455 (39%), Gaps = 49/455 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL-----GQVGLL----- 280
Y L+ L +AGR EA+ +F M + PD+ Y ++ L G+ GLL
Sbjct: 48 YATLIEGLCEAGRIDEAVELFGEMDQ-----PDMHMYAALVKGLCNAERGEEGLLMLRRM 102
Query: 281 KEL---------VKLIE-RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
KEL +++ R R++ +K + M ++ ++ L P +V AV+NA +
Sbjct: 103 KELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRM 162
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
V + ++ G KP+ TY ++ GK KM G A+TY +L
Sbjct: 163 SDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLL 222
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+R +G I A +R ME G++ Y L LC +GR A + + +++ R
Sbjct: 223 IRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET-RG 281
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML----KVYSRNDMF 505
KP +TF LI G D + M C P+ T ++ + K+ +
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341
Query: 506 SKAKELFEETTRANSSGYTFLS----------------GD--GAPLKPDEYTYSSMLEAS 547
S E+ ++ + ++ YT + G+ + PD TY++ + A
Sbjct: 342 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 401
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ E V M+ +G +D + L+ + G+ + +P+
Sbjct: 402 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 461
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE 642
+ +L + E + L A + +T+
Sbjct: 462 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTD 496
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 125/316 (39%), Gaps = 53/316 (16%)
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
+SG +P A T+ + ++ + D+ + F KM G A ++Y L+ E G+I+
Sbjct: 3 RSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRID 62
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL------------- 448
EAV M+Q + +Y L LCN R ++ +L++ ++K L
Sbjct: 63 EAVELFGEMDQPDM----HMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVV 118
Query: 449 ------RHSK---------------PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCE 486
R +K P +T T +I + G + D + + + MK C+
Sbjct: 119 DFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 178
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ T NA+++ + KA L + RA + PD TY+ ++
Sbjct: 179 PNVWTYNALVQGFCNEGKVHKAMTLLNK-MRA------------CGVNPDAVTYNLLIRG 225
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
E + + M G DQ + L+ + G+ FDSL G P+
Sbjct: 226 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 285
Query: 607 PLFFTEMLIQAIVQSN 622
+ F LI + +S
Sbjct: 286 AVTFNS-LINGLCKSG 300
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 166/406 (40%), Gaps = 55/406 (13%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ ++ Y L+ L K GR +A +F+ LE + P+ ++S+ L + G
Sbjct: 248 IADQYTYNALINALCKDGRTDQACSLFD-SLETRGIKPNAVTFNSLINGLCKSGKADIAW 306
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL-NACVPSHQWKGVFWVFKQLRKS 343
K +E+M PD Y++ + + C +G+ ++ + L+K
Sbjct: 307 KFLEKMVSAGCT---------------PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 351
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
+KPS Y + + +L+ Y LV + +M SG +TY +RA+ EG++NEA
Sbjct: 352 -VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 410
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ M + GV Y L + G+ A+ +++++ S+ S P + T+ L+
Sbjct: 411 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV-ASVPNQFTYFILLR 469
Query: 464 SSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ ++D + + T + K D+F + + NS Y
Sbjct: 470 HLVRMRLVEDVLPL-------------TPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 516
Query: 524 T-FLSGDGAPLKPDEYT--YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
+ L G + +E T S M E S + + E +Y + C+ + AW+LV
Sbjct: 517 SSILEGFSEDGRTEEATSLVSLMKEDSISLN-----EDIYTALVTCFCKSKRYLDAWVLV 571
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
C +++H G IP + + +L I + +KA
Sbjct: 572 -------CSMIQH--------GFIPQLMSYQHLLSGLICEGQTDKA 602
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 132/380 (34%), Gaps = 81/380 (21%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTK 233
++ +R+M GL+ + L+ L G QA S+ D + + R +K V +
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL----ETRGIKPNAVTFNS 291
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ L K+G+ A + M+ PD Y S L ++ +E + I M QK
Sbjct: 292 LINGLCKSGKADIAWKFLEKMVS-AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 350
Query: 294 ---PS-------------KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQWKGV 333
PS +R + + W ++ PD+V Y + A +
Sbjct: 351 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 410
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR- 392
V ++ K+G+ Y M+ G+ D ++M TY +L+R
Sbjct: 411 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRH 470
Query: 393 ---------------------------------------------------AFWEEGKIN 401
F E+G+
Sbjct: 471 LVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTE 530
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTG 460
EA + V M++ + +Y L C C + R+ DA ++V + ++H P +++
Sbjct: 531 EATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSM--IQHGFIPQLMSYQH 588
Query: 461 LIISSMDGGHIDDCISIFQH 480
L+ + G D IF +
Sbjct: 589 LLSGLICEGQTDKAKEIFMN 608
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/447 (19%), Positives = 185/447 (41%), Gaps = 51/447 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ ++ +L ++GR +AL++F+ M + PD + VA + GLL V L+ +
Sbjct: 114 YSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTKA 173
Query: 291 RQKPSKRIKNMHRKN--------------------W--DPVLEPDLVVYNAVLNACVPSH 328
Q +RI+ N W D + PD +N V+
Sbjct: 174 SQF-GRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVG 232
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-GALTY 387
++ + +++ + G P T+ + ++ + ++ + + H+ R++ + G + +TY
Sbjct: 233 NFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTY 292
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
++ + + G++ +A++ +M + G Y L + G+ D V +
Sbjct: 293 TSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVL---INGYGKALDMESAVRMYRQ 349
Query: 448 --LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
LR P +TF+ LI G +DD + I++ M + H +PN+ T + ++ + +
Sbjct: 350 LILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNR 409
Query: 505 FSKAKELFEE-TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
++A E RA+ + P + Y+ +++ Q E + M
Sbjct: 410 SAEALGFLRELNMRAD-------------IAPQTFIYNPVIDILCKGGQVEEANLIVTDM 456
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF---FTEMLIQAIVQ 620
GC D+ + L++ G+ F ++E G P + F +++A +
Sbjct: 457 EEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMP 516
Query: 621 SNYEKAVALINAMAYA----PFHITER 643
+ ++ + + + A A P H ++R
Sbjct: 517 NEVDQIMLIASGHASASQKVPSHPSQR 543
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 164/392 (41%), Gaps = 32/392 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G QA +LD + K D+ +++ L+ L + GR EAL F M
Sbjct: 117 VINGFCKAGQVDQAFELLDEMKERGVKMDV---LLHSTLIQGLCRKGRIDEALEQFKSMG 173
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+C+ P++ Y++V L + + E ++L + M KR + H EPD++
Sbjct: 174 EECS--PNVITYNTVVNGLCKANRIDEALELFDDM----EKRYEASHG------CEPDVI 221
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ V++A + + + FK++R G P+ TY ++ + + + E M
Sbjct: 222 SYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHM 281
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G I + + ++ A W+ + +A + + G Y LC GR
Sbjct: 282 KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRV 341
Query: 436 QDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
+A +++E ++S P IT++ +I G +D +F M H C P+ T
Sbjct: 342 DEAYRILLEMVES--KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 399
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+L +S + K++E F ++G+ P TY+ +++ A
Sbjct: 400 TLLHGFSEH---KKSREAFRVHEDMVNAGFI----------PGLQTYNVLMDCVCGADSV 446
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
E +Y M Q D +A L+ RA
Sbjct: 447 ESALEIYHKMKRKKRQPDCNTYAPLIQCLCRA 478
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 137/329 (41%), Gaps = 24/329 (7%)
Query: 295 SKRIKNMHR---KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+KR + HR + +P+ P+ ++Y V+N + Q F + ++++ G+K
Sbjct: 89 AKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLL 148
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
+ ++ + + G+ D E F+ M + +TY +V + +I+EA+ +ME
Sbjct: 149 HSTLIQGLCRKGRIDEALEQFKSMGEECSP-NVITYNTVVNGLCKANRIDEALELFDDME 207
Query: 412 QR-----GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+R G Y + LC R A ++++++ P +T++ LI
Sbjct: 208 KRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV-GCAPNVVTYSSLIDGLC 266
Query: 467 DGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
+C+ + HMK+ NI NAML +ND KA + FE ++
Sbjct: 267 KVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK----- 321
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
KP+ TY+ + A + + + M S D ++ ++ +A
Sbjct: 322 --------KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKA 373
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
G+ + F ++ IPHP+ F +L
Sbjct: 374 GRMDKADDVFTRMMVHECIPHPVTFMTLL 402
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 142/387 (36%), Gaps = 68/387 (17%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L KAGR EA RI M+E + PD+ Y S+ + G + + + RM
Sbjct: 335 LCKAGRVDEAYRILLEMVES-KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM------ 387
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+H P V + +L+ + + F V + + +G P TY + M+
Sbjct: 388 ---VHE------CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMD 438
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+ + + E + KM + TY L++ +++EA + ME VV
Sbjct: 439 CVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 498
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
++ + L LC G +A V++ + + +PL TF L+
Sbjct: 499 NGAICHALVEVLCKQGEVDEACSVLDNVVEV-GCQPLGETFKILV--------------- 542
Query: 478 FQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD----GAP- 532
++Y R + +K L A+++ Y+ + G P
Sbjct: 543 ------------------EELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPD 584
Query: 533 -------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++PDE TY ++L + + E ++ MA GC + L+
Sbjct: 585 EAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLI 644
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPH 606
EA A F++++ AG P
Sbjct: 645 GEACSADMADEAFRIFEAMVAAGFTPQ 671
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/465 (18%), Positives = 170/465 (36%), Gaps = 76/465 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ ++ L KA R +A F M P++ Y S+ L +V E ++L+ M
Sbjct: 223 YSTVIDALCKAQRVDKAYEYFKRM-RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHM 281
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++K +++ +NA+L+A + + + F++L KSG KP+
Sbjct: 282 KEKG---------------FGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVV 326
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN--------- 401
TY +A+ + ++G+ D + +M +S +TY ++ F + G+++
Sbjct: 327 TYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 386
Query: 402 --------------------------EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
EA +M G + Y L C+C
Sbjct: 387 MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 446
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
+ A+ + K+K + +P T+ LI +D+ M+ D+ PN +A
Sbjct: 447 ESALEIYHKMKR-KKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHA 505
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSS--GYTF-------------------LSGDGAPL 533
+++V + +A + + G TF L G
Sbjct: 506 LVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPG--F 563
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
D TYS + A + + V + M L G + D+ + +L +
Sbjct: 564 VADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIA 623
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
F+ + G P + +T ++ +A ++A + AM A F
Sbjct: 624 EFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGF 668
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 20/255 (7%)
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
S L+ + +K K+ Y L+ L +A R EA ++M D N+ P+ A H++
Sbjct: 448 SALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEAD-NVVPNGAICHAL 506
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMH---------RKNWDP----VLEPDLVVY 317
L + G + E +++ + + + + RK W+ + P V
Sbjct: 507 VEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVAD 566
Query: 318 NAVLNACVPSHQWKG----VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
A + CV G V +Q+ G++P TY + + + + F
Sbjct: 567 AATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFE 626
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
KMA G A G +TY +L+ +EA M G A L+ CL + G
Sbjct: 627 KMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686
Query: 434 RWQDAMLVVEKIKSL 448
+QD +LV ++I ++
Sbjct: 687 -YQD-LLVRQRIMTM 699
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 171/416 (41%), Gaps = 67/416 (16%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E+ ++PD+ Y+++ + GLL+E +L++ M K L+P +
Sbjct: 280 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG---------------LKPCV 324
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YNA++N + ++ V ++ K G+ P ATY + + ++ F +
Sbjct: 325 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 384
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G +++ L+ + G +++A+ R+M+ G+ +Y L C NG
Sbjct: 385 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 444
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTV 492
+A+ V +++ L L++ I++ + + + +F M + P+ T
Sbjct: 445 MSEALKVRDEM--LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 502
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ YS++ +KA LFE + N LKPD TY+++++ +
Sbjct: 503 TTLINGYSKDGNMNKAVTLFEMMIQRN-------------LKPDVVTYNTLIDGFCKGSE 549
Query: 553 WE--------------YFEYVYKGMALSG-CQLDQTKHAWLL--------VEAS------ 583
E Y ++ G+ ++G C + A+ L EA+
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609
Query: 584 ------RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
RAG + ++L G +P + + ++ I + N ++A AL+N M
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 665
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 128/342 (37%), Gaps = 24/342 (7%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+V++ ++ V + + + F+ L+ GL S + +++ G DL E +++
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ +SG + T +++ A + KI + + +ME++GV Y L C G
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
++A +++ + S + KP T+ +I G + M K P+ T N
Sbjct: 305 LEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 363
Query: 494 AMLKVYSRNDMFSKAKELFEETTRAN--------SSGYTFLSGDG--------------A 531
+L RND A+ +F+E S+ LS +G A
Sbjct: 364 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 423
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L PD Y+ ++ V M GC LD + +L +
Sbjct: 424 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 483
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ F + E G P FT ++ N KAV L M
Sbjct: 484 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 525
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 26/245 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK--ELVKL 286
+ +T L+ K G ++A+ +F +M++ NL PD+ Y+++ G K E+ K+
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLID-----GFCKGSEMEKV 553
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E S+RI P+ + Y ++N F ++ ++ + G +
Sbjct: 554 NELWNDMISRRIY------------PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 601
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
+ T ++ ++G EF M G +TY L+ F +E ++ A A
Sbjct: 602 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 661
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
V ME G++ Y + GR Q+A L++ K+ R P T+T LI
Sbjct: 662 VNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE-RGVNPDRSTYTSLI---- 716
Query: 467 DGGHI 471
GH+
Sbjct: 717 -NGHV 720
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 135/344 (39%), Gaps = 39/344 (11%)
Query: 219 LKDKRDLKS------RFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVA 271
LK RD+K+ +YT L+ + G EAL++ + MLE C L D+ Y+++
Sbjct: 414 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL--DVVTYNTIL 471
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
L + +L E +L M ++ + PD + ++N
Sbjct: 472 NGLCKEKMLSEADELFTEMTERG---------------VFPDFYTFTTLINGYSKDGNMN 516
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+F+ + + LKP TY ++ + + + V+E + M ++Y +L+
Sbjct: 517 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 576
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ G ++EA M ++G T + C G A + + L+
Sbjct: 577 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML-LKGI 635
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 510
P IT+ LI + ++D ++ M++ P++ T N +L +SR +A+
Sbjct: 636 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 695
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+ + + PD TY+S++ T + +
Sbjct: 696 IMLKMIERG-------------VNPDRSTYTSLINGHVTQNNLK 726
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 92/246 (37%), Gaps = 34/246 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ G G+ +A+++ + + +R+LK V Y L+ K + ++N M
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMI----QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 560
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK--------------------- 293
+ +YP+ +Y + +G + E +L + M +K
Sbjct: 561 ISR-RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619
Query: 294 ---PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + NM K + PD + YN ++N + F + ++ SGL P
Sbjct: 620 AVKADEFLSNMLLKG----IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 675
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + + G+ KM + G TY L+ + + EA M
Sbjct: 676 TYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 735
Query: 411 EQRGVV 416
QRG V
Sbjct: 736 LQRGFV 741
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 159/369 (43%), Gaps = 37/369 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ L + +A + MLE L P++ Y+++ + G++++ V ++E
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEK-GLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 290 MRQK---PSKRIKNMHRKNW------------DPVLE----PDLVVYNAVLNACVPSHQW 330
M + P+ R N K + + +LE PD+V YN++++ S +
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ + + GL P TY ++ + +S + + + F + + G + Y L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ + + GK++EA + M + + + + L LC +G+ ++A L+ EK+ +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI-G 597
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 509
+P T T LI + G D S FQ M +P+ T ++ Y R A+
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
++ + R N + PD +TYSS+++ Q + V K M +GC+
Sbjct: 658 DMMAK-MRENG------------VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 570 LDQTKHAWL 578
Q H +L
Sbjct: 705 PSQ--HTFL 711
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 189/454 (41%), Gaps = 60/454 (13%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGL-KDKR-DLKSRFV---YTKLLAILGKAGRPHEA 247
M+K +GD A+ VLD + KD+R +LK + + Y LL L + G E
Sbjct: 149 MIKSCDSVGD------ALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEM 202
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---------PSKRI 298
+++ MLED + P+I Y+ + ++G ++E + + ++ + S +
Sbjct: 203 KQVYMEMLED-KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 299 KNMHRKNWDPVLEP-----------DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
RK+ D + + V Y +++ + + +F +++ P
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 321
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + ++ + S + ++M ++G TY VL+ + + K +A +
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M ++G++ Y L C G +DA+ VVE ++S R P T+ LI
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES-RKLSPNTRTYNELI----- 435
Query: 468 GGHIDDCISIFQHMKDHCEPNI----GTVNAMLKVYSRNDMFSKAKELFEETTRANS--S 521
K +C+ N+ G +N ML+ D+ + L + R+ + S
Sbjct: 436 --------------KGYCKSNVHKAMGVLNKMLERKVLPDVVT-YNSLIDGQCRSGNFDS 480
Query: 522 GYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
Y LS + L PD++TY+SM+++ + + E ++ + G + + L+
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+AGK + +L +P+ L F ++
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 170/440 (38%), Gaps = 52/440 (11%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVY-TKLLAILGKAGRPHE 246
FT G + L LG G L + G+ + +Y T + A++ + G
Sbjct: 178 FTFGVAARALCRLGRAGD------ALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEA 231
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A+ + ++L C D+ ++ + + L +G ++E +L++RM +
Sbjct: 232 AMLLDEMLLMGC--AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCM---------- 279
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
P +V Y +L + Q + +L + + + L GK
Sbjct: 280 -----PSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVVMLNTVIRGCLTEGKLA 330
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
E + M G TY +L+ + G+ AV + ME++G Y L
Sbjct: 331 RATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLL 390
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 485
C NG W DA +++++ + S + + G+I + G +D + Q MK C
Sbjct: 391 HSFCRNGMWDDARAMLDQMLAKGFSMNSQ-GYNGIIYALCKDGKLDQATRLVQEMKSQGC 449
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYTFLSGDGAPLKPDEYTYS 541
+P+I T N M+ ND+ +A+ +F EE AN TY+
Sbjct: 450 KPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANG-----------------ITYN 492
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
+++ A +W+ + M L GCQLD + L+ + G + ++
Sbjct: 493 TLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTK 552
Query: 602 GEIPHPLFFTEMLIQAIVQS 621
G P+ F MLI + ++
Sbjct: 553 GIKPNN-FSYNMLINELCKA 571
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 114/277 (41%), Gaps = 17/277 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P YN VL+ + +++++ + + P+ T+G+A + + G+
Sbjct: 138 VSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDAL 197
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
R MA+ G A+ Y+ ++ A +G + EA + M G + + +L L
Sbjct: 198 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGL 257
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
C GR ++A +V+++ + + P +T+ L+ D+ ++ + E N+
Sbjct: 258 CGLGRVREAARLVDRMMT-QGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP---EVNV 313
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+N +++ ++A EL+E + G P PD +TYS ++
Sbjct: 314 VMLNTVIRGCLTEGKLARATELYE-----------MMGSKGCP--PDVHTYSILMHGLCK 360
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
++ + M GC + ++ LL R G
Sbjct: 361 LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG 397
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
LL G W A ++LD + L + S+ Y ++ L K G+ +A R+ M
Sbjct: 389 LLHSFCRNGMWDDARAMLDQM--LAKGFSMNSQG-YNGIIYALCKDGKLDQATRLVQEMK 445
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C PDI Y+++ L L++E +++ R + + +
Sbjct: 446 SQGCK--PDICTYNTMIYHLCNNDLMEE---------------AEHIFRNLIEEGVVANG 488
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ YN +++A + + +W+ + ++ G + +Y ++ + + G D +
Sbjct: 489 ITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEE 548
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G +Y +L+ + GK+ +A+ + M +G+ Y L LC G
Sbjct: 549 MVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 608
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A+ ++EK+ + + P +T+ LI
Sbjct: 609 THAALNLLEKLPN-ENVHPDIVTYNILI 635
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 158/384 (41%), Gaps = 45/384 (11%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKP 294
LG +GR HEA +F + E+ + P AY+++ + G LK+ +V +E+ KP
Sbjct: 302 LGNSGRTHEAEALFEEIRENGS-EPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKP 360
Query: 295 SKRIKNM------HRKNWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVF 337
++ ++ H W+ +EP+ VY+ +L + +W+ F V
Sbjct: 361 DEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVL 420
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
K ++ +G++P Y + ++ + D F +M G +T+ L+ +
Sbjct: 421 KDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKS 480
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
G+ N A M+QRG + Y + + RW+ L + K++S + P IT
Sbjct: 481 GRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQS-QGLLPNSIT 539
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+T L+ G D I + +K +P NA++ Y++ + A F T
Sbjct: 540 YTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMT 599
Query: 517 ---------------------RANSSGYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWE 554
R ++ + L ++PD TY+++++A +++
Sbjct: 600 TEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQ 659
Query: 555 YFEYVYKGMALSGCQLDQTKHAWL 578
VY+ M SGC D+ A L
Sbjct: 660 KVPAVYEEMVTSGCTPDRKARAML 683
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 123/301 (40%), Gaps = 33/301 (10%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS------RFVYTKLLAILGKAGRPHEAL 248
++L DKG W+++ VL +D+KS R Y ++ GK A+
Sbjct: 402 RILASYRDKGEWQKSFQVL---------KDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAM 452
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
F ML + + PD ++++ + G +L M+Q+
Sbjct: 453 ATFERMLSE-GIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRG-------------- 497
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
P + YN ++N+ +W+ V +++ GL P++ TY ++V +SG++
Sbjct: 498 -YSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDA 556
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
E + +G + Y L+ A+ + G AV A R M G+ + L
Sbjct: 557 IECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINA 616
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
+ R +A V++ +K + +P +T+T L+ + + ++++ M C P
Sbjct: 617 FGEDRRDAEAFAVLQYMKE-NNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTP 675
Query: 488 N 488
+
Sbjct: 676 D 676
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/438 (16%), Positives = 165/438 (37%), Gaps = 29/438 (6%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
L +R + + Y L+ + G +AL + + M D PD Y S+
Sbjct: 176 LLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRD-GYQPDFVNYSSI-------- 226
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
++ + R + S ++ ++ + +E D + N ++ +
Sbjct: 227 -----IQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLA 281
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+ +GL P +T + + SG+ F ++ ++G Y L++ + + G
Sbjct: 282 MAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTG 341
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+ +A V ME+ GV Y L + GRW+ A +V++++++ + +P +
Sbjct: 342 SLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEA-SNVEPNSYVY 400
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
+ ++ S D G + + MK + +P+ N M+ + + + A FE R
Sbjct: 401 SRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFE---R 457
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
S G ++PD T+++++ + + E ++ M G T +
Sbjct: 458 MLSEG----------IRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNI 507
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
++ + + + G +P+ + +T ++ + A+ + +
Sbjct: 508 MINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG 567
Query: 638 FHITERQWTELFESNEDR 655
F T + L + R
Sbjct: 568 FKPTSTMYNALINAYAQR 585
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 184/452 (40%), Gaps = 38/452 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R +A L+ + + + + GL + L+ LG G
Sbjct: 221 ESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVA 280
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A L + L + ++R Y LL + G A ++ + M C + PD A Y
Sbjct: 281 EA-EALFLEFFLAGEIKPRTR-AYNALLKGYVRIGSLKNAEQVLDEM-SQCGVAPDEATY 337
Query: 268 HSVAVTLGQVGL---LKELVKLIERMRQKPSKRIKNM------HRKNWDPV--------- 309
+ + G + L+K +E KPS + + R +W
Sbjct: 338 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA 397
Query: 310 --LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
+ PD YN +++ + F ++R+ G++P T+ ++ + G++D
Sbjct: 398 SGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDR 457
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
E F +M +S G TY +++ E+ A + M+++G+V Y L
Sbjct: 458 AAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVD 517
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCE 486
+GR+++A+ +E +K+ KP + L+ + G D +++ + MK D E
Sbjct: 518 VYGRSGRYKEAIDCIEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLE 576
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+I +N+++ + + +A + + F+ +G L+PD TY+++++A
Sbjct: 577 VSILVLNSLINAFGEDRRVVEAFSVLQ-----------FMRENG--LRPDVITYTTLMKA 623
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
Q++ +Y+ M SGC D+ A L
Sbjct: 624 LIRVEQFDKVPVIYEEMITSGCAPDRKARAML 655
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 120/295 (40%), Gaps = 25/295 (8%)
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+KP Y ++ ++ G + +M++ G A TY +LV A+ G+ A
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
++ ME GV ++ V+ + + G WQ A V+ ++++ +P + F ++I
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA-SGVRP-DRHFYNVMID 412
Query: 465 SMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+ GH D F M++ EP++ T N ++ + + +A ELFEE +N
Sbjct: 413 TFGKYNCLGHAMDA---FNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
P TY+ M+ WE E + M G + + L+
Sbjct: 470 C-------------PPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLV 516
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 633
R+G+ +++ G P P + L+ A Q + A+ ++ AM
Sbjct: 517 DVYGRSGRYKEAIDCIEAMKADGLKPSPTMY-HALVNAYAQRGLADHALNVVKAM 570
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 180/434 (41%), Gaps = 66/434 (15%)
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS---------KRIKNMHRKNWDPVLE 311
+ A +S+ + G +G+++EL+ + RM++ +PS + +M ++ + V E
Sbjct: 190 VFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFE 249
Query: 312 --------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
PD+V YN ++ + K F + K L+P TY ++ G
Sbjct: 250 VMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEG 309
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
+D +++M + G I Y +++ ++G+ E + NM ++G ++Y
Sbjct: 310 NFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYT 369
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
L NG +A+ + E++K +P ++T+ ++ G +D+ + F+ KD
Sbjct: 370 ALIDAYGKNGNVNEAINLFERMKG-EGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKD 428
Query: 484 HCEPNIGTVNAM-----LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
N VNAM + + +A++ FEE G P D Y
Sbjct: 429 ----NEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVER-----------GCP--QDSY 471
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF--- 595
Y+++++A A + + E ++K M GC DQT + + ++ S K H E A
Sbjct: 472 CYNALIDALAKSGKMEEALVLFKRMEKEGC--DQTVYTYTIL-ISGLFKEHRNEEALKLW 528
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 655
D +++ G P F + + + +A +++ + AP +
Sbjct: 529 DLMIDKGITPTTASFRALSVGLCLSGKVARACKILDEL--APMGV--------------- 571
Query: 656 ISRDKLEKLLNALC 669
I E ++N LC
Sbjct: 572 IPETAFEDMINVLC 585
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 115/289 (39%), Gaps = 20/289 (6%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
A +++ L + T + MN+ G L+ G G+ +A+++ + +
Sbjct: 332 AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERM 391
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
G + D Y ++ L K+GR EA+ F +D + + Y S+ LG+
Sbjct: 392 KGEGFEPD---DVTYGVIVNGLCKSGRLDEAVEYFEF-CKDNEVAVNAMFYSSLIDGLGK 447
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G + E K E M ++ + D YNA+++A S + + +
Sbjct: 448 AGRVDEAEKFFEEMVERGCPQ---------------DSYCYNALIDALAKSGKMEEALVL 492
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
FK++ K G + TY + + + + + + + + M G +++ L
Sbjct: 493 FKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCL 552
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
GK+ A + + GV+ + + ++ LC GR + A + + I
Sbjct: 553 SGKVARACKILDELAPMGVI-PETAFEDMINVLCKAGRTEQACKLADGI 600
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 167/391 (42%), Gaps = 34/391 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV--KLI 287
V+ ++ + ++GR +A ++ + M D ++ PD+ +++++ + G L V +L+
Sbjct: 63 VFNAMMGVYARSGRFDDARQLLDAM-RDQDIEPDLVSFNTLINARAKSGCLAAGVALELL 121
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD + YN +++AC VF+++ S +P
Sbjct: 122 HEVRQAG---------------LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP 166
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + V + GK F+++ + G A+TY L+ AF +EG +
Sbjct: 167 DLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVC 226
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ + G Y + GR A+ + ++++++ P +T+T L+ S
Sbjct: 227 EELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAI-GCTPDAVTYTVLVDSLGK 285
Query: 468 GGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
I + + + M D +P + T +A++ Y+++ A+ F+ R SG
Sbjct: 286 MDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFD---RMVESG---- 338
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+KPD Y ML+ A + + +Y+ M G + D + LL ++
Sbjct: 339 ------VKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGN 392
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+ +E + E+ +PL + +LI+A
Sbjct: 393 EHDEIEGVIQDMEAVFEM-NPLVISSILIKA 422
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 150/341 (43%), Gaps = 17/341 (4%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D ++NA+++A S ++ +F + K G P+ + M ++ G+ D ++
Sbjct: 621 DRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVV 680
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+++ I T +++ AF + G + E + M+ G + +Y + LC+N
Sbjct: 681 QELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHN 740
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGT 491
R++D L+V +++ KP + L++ G+ D I ++ ++ EP+ T
Sbjct: 741 KRFRDVELMVAEMEGAGF-KPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDT 799
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA-PLKPDEYTYSSMLEASATA 550
N ++ +YSRN + +E G+T L G L P +Y +L AS A
Sbjct: 800 YNTLIVMYSRN---FRPEE-----------GFTLLYEMGKRGLTPKLESYKILLAASGKA 845
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
WE + +++ M G +L+++ + ++ A EH ++ E G P
Sbjct: 846 KLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATM 905
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
++ + ++A ++N++ + I+ ++ + ++
Sbjct: 906 HILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDA 946
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 149/364 (40%), Gaps = 33/364 (9%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P + ++++ + G + +L++ MR D +EPDLV +N ++
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMR---------------DQDIEPDLVSFNTLI 103
Query: 322 NACVPSHQWK-GV-FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
NA S GV + ++R++GL+P A TY + Q D F +M S
Sbjct: 104 NARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASE 163
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
TY +V GK EA + + ++G A Y L G +
Sbjct: 164 CRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVE 223
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKV 498
V E++ K IT+ +I G +D + ++ M+ C P+ T ++
Sbjct: 224 RVCEELVKAGFRKD-GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDS 282
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ D S+A ++ EE A LKP T+S+++ A A + + + E
Sbjct: 283 LGKMDRISEAGKVLEEMADAG-------------LKPTLVTFSALICAYAKSGRQDDAER 329
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
+ M SG + D+ + +L +R+ + L + ++++ G P + ++L+ A+
Sbjct: 330 TFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLY-QVLLAAL 388
Query: 619 VQSN 622
+ N
Sbjct: 389 AKGN 392
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 132/332 (39%), Gaps = 20/332 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG--KYDLVH 369
P + V+NA++ S ++ + +R ++P ++ + +SG +
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E ++ ++G A+TY L+ A + +++AVA M Y +
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
G+ Q+A L+ +++ + +P +T+ L+ + G ++ + + + K +
Sbjct: 179 GRCGKAQEAELMFKELVE-KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKD 237
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T N M+ +Y + A L++E + PD TY+ ++++
Sbjct: 238 GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCT-------------PDAVTYTVLVDSLG 284
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ V + MA +G + + L+ +++G+ E FD ++E+G P L
Sbjct: 285 KMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRL 344
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM---AYAP 637
+ ML K + L AM Y P
Sbjct: 345 AYLVMLDVFARSDETRKLMVLYRAMIKDGYKP 376
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 24/183 (13%)
Query: 480 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL---------------FEETTRANSSGYT 524
H++ P + NAM+ VY+R+ F A++L F A +
Sbjct: 52 HLRFPHLPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGC 111
Query: 525 FLSGDG---------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+G A L+PD TY++++ A + + V++ M S C+ D +
Sbjct: 112 LAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTY 171
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
++ R GK E F L+E G P + + +L + + E+ + +
Sbjct: 172 NAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK 231
Query: 636 APF 638
A F
Sbjct: 232 AGF 234
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 61/346 (17%), Positives = 143/346 (41%), Gaps = 29/346 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++ G W+QA ++V GLK + + R ++ L+ ++G A IF++M+
Sbjct: 594 MIEAYGKLKLWQQAE---NFVKGLKQESGVDRR-IWNALIHAYAESGLYEHARAIFDIMI 649
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW---DPV 309
+ L P + + + + L G L EL +++ ++ K SK + + + V
Sbjct: 650 KKGPL-PTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDV 708
Query: 310 LE--------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
E P++ +Y +++ + +++ V + ++ +G KP
Sbjct: 709 FEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTL 768
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + +G +D E + + ++G TY L+ + + E + M +RG+
Sbjct: 769 LLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGL 828
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDD 473
Y L W+ A L+ E++ K R ++ + + ++ + +
Sbjct: 829 TPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEH 888
Query: 474 CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+S + +D EP I T++ ++ Y + +A+++ +N
Sbjct: 889 LLSAMK--EDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSN 932
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 122/325 (37%), Gaps = 41/325 (12%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L KAG E ++I+N M + P++ Y + L +++ ++ M
Sbjct: 698 MLEAFAKAGDVFEVMKIYNGM-KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGA 756
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K PDLVV N +L + + V+ + ++GL+P TY
Sbjct: 757 GFK---------------PDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYN 801
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA-----FWEEGKINEAVAAVR 408
+ + ++ + + +M K G +YK+L+ A WE+ +
Sbjct: 802 TLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADL-----LFE 856
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +G S+Y+ + N A ++ +K +P T L+ S
Sbjct: 857 EMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKE-DGIEPTIATMHILMTSYGTS 915
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
GH D+ + +K + E + + +L Y RN +S E R
Sbjct: 916 GHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKR---------- 965
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQ 552
DG ++PD ++S + A++ Q
Sbjct: 966 -DG--VEPDHQVWTSFIRAASLCEQ 987
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 159/398 (39%), Gaps = 46/398 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+WR+A+ + + DL + + +L+ + +AL F LM
Sbjct: 211 LINACGSSGNWREALKLCKKMTENGVGPDLVTHNI---ILSAYKTGAQYAKALSYFELM- 266
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK------------------- 296
+ N+ PD + + L ++G ++ + + + MR+K ++
Sbjct: 267 KGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNG 326
Query: 297 RIKNMHRKNWDPV---LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+I+N V L+P++V YN ++ A K VF ++ SGL+P +Y
Sbjct: 327 QIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYT 386
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +S + E F M + ++Y ++ A+ G + EAV +R MEQ
Sbjct: 387 SLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQD 446
Query: 414 GVVGTASVYYEL--ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
G+ A L AC C+ D VV + RH K I + I S M+ G
Sbjct: 447 GIYPNAVSICTLLAACGRCSRKVNID---VVLQAAERRHIKLNTIAYNSAIGSYMNVGEF 503
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE--------TTRANSSG 522
+ S+++ M K P+ T ++ + + +A E E T A SSG
Sbjct: 504 EKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSG 563
Query: 523 YT------FLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
F A PD TY+ ML A A W+
Sbjct: 564 KITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWK 601
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 114/244 (46%), Gaps = 15/244 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD NA++NA S QW+ + + + + + PS +TY + SG + +
Sbjct: 167 KPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWREALK 226
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+KM ++G +T+ +++ A+ + +A++ M+ + + + CL
Sbjct: 227 LCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLT 286
Query: 431 NNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
G+++ A+ + + ++ R P +TFT +I G I++C ++F M + +PN
Sbjct: 287 KLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPN 346
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I + N ++ Y+ + M +A +F +SG L+PD +Y+S+L +
Sbjct: 347 IVSYNTLMGAYASHGMNKEALSVFNAI---KNSG----------LRPDVVSYTSLLNSYG 393
Query: 549 TAHQ 552
+ Q
Sbjct: 394 RSQQ 397
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/450 (19%), Positives = 183/450 (40%), Gaps = 53/450 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L+K + KGS ++ V W +K++R+ +R +Y ++ + + +A +F
Sbjct: 105 LIKEITQKGSIEHSILVFRW---MKNQRNYCARTDIYNMMIRLHARHNWTDQARGLF-FE 160
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
++ PD +++ G+ G + + ++E M QK + P
Sbjct: 161 MQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQK---------------AIPPSR 205
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN ++NAC S W+ + K++ ++G+ P T+ + + +Y +F
Sbjct: 206 STYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFEL 265
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR------GVVGTASVYYELACC 428
M + T +++ + G+ +A+ ++M ++ VV S+ + +
Sbjct: 266 MKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSV- 324
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
NG+ ++ V + + KP +++ L+ + G + +S+F +K+ P
Sbjct: 325 ---NGQIENCRAVFSTMVA-EGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRP 380
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++ + ++L Y R+ KA+E+FE R LKP+ +Y++M++A
Sbjct: 381 DVVSYTSLLNSYGRSQQPKKAREVFEMMKRDK-------------LKPNIVSYNAMIDAY 427
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ V + M G + LL R + + D +L+A E H
Sbjct: 428 GSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSR----KVNIDVVLQAAERRHI 483
Query: 608 LFFTEMLIQAIVQ----SNYEKAVALINAM 633
T AI +EKA ++ +M
Sbjct: 484 KLNTIAYNSAIGSYMNVGEFEKATSMYRSM 513
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 149/336 (44%), Gaps = 34/336 (10%)
Query: 196 LLKGLGDKGSWRQAMS---VLDWVYG-------------LKDKRDLKSRFVYTKLLAILG 239
+LK + D G WR + LD+ G +K K + F+Y+K++ I
Sbjct: 176 VLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWSTINEMKQKGFPLNSFMYSKVVGIYR 235
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
G +A+ + + E + D +S+ T G+ G L E +KL ++M+++
Sbjct: 236 DNGMWKKAIEVLEEIRER-GISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEG----- 289
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ P++V +N+++ + F +F +++ GL P + + +
Sbjct: 290 ----------VRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISCL 339
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ GK+D++ ++F M G Y VLV + + GK A V+ ++ GV+ +
Sbjct: 340 GEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSP 399
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
S++ LA G + ++V++ I +P + LI + + G + IS++
Sbjct: 400 SIFCVLANAYAQQGLCEQVIMVLQ-IMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYH 458
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
H+K+ P++ T ++K + R F + +++E
Sbjct: 459 HIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKE 494
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 143/339 (42%), Gaps = 22/339 (6%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
WRS+ E ++ +D W + M Q G K++ D G W++A+
Sbjct: 186 WRSK-ETYQIFLDYYVGAGRLEDTWSTINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAI 244
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
VL+ + +++ + ++ GK G EAL++F M ++ + P+I ++S+
Sbjct: 245 EVLEEI---RERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKE-GVRPNIVTWNSL 300
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ G + L M+++ L PD ++ +++ +W
Sbjct: 301 IKWHCKEGDFMKAFHLFTDMQEQG---------------LYPDPKIFVTIISCLGEQGKW 345
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ F+ ++ G K A Y + +++ Q GK+ E + + G + + VL
Sbjct: 346 DIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFCVL 405
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
A+ ++G + + ++ ME G+ + L N GR+ +A+ V IK
Sbjct: 406 ANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESGV 465
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
S P +T+T L+ + + D+ I++ M+ D C P+
Sbjct: 466 S-PDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDGCTPD 503
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 125/300 (41%), Gaps = 17/300 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+FK++ G KP Y + L+ G L + ++M G TY++ + +
Sbjct: 141 LFKEMVCYGYKPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYV 200
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G++ + + + M+Q+G + +Y ++ +NG W+ A+ V+E+I+ L+
Sbjct: 201 GAGRLEDTWSTINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIR--ERGISLD 258
Query: 456 ITFTGLIISSMDG-GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
II + G +D+ + +F+ M K+ PNI T N+++K + + F KA LF
Sbjct: 259 THICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFT 318
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
+ L PD + +++ +W+ + ++ M + G +
Sbjct: 319 DMQEQG-------------LYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGA 365
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+A L+ + GK +L G + P F + Q E+ + ++ M
Sbjct: 366 VYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIM 425
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 33/254 (12%)
Query: 299 KNMHRKN---WDPVL---EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
K+M +N W+ V+ +PD+V + A+++A + F +F QL + P T+
Sbjct: 606 KSMEFQNLVSWNSVIAGSQPDIVSWTALISA-FAEQDPEQAFLLFCQLHRQSYLPDWYTF 664
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+A++ + ++ K G + L+ A+ G + + M
Sbjct: 665 SIALKASTYFATEQRAMDIHSQVIKEGFQEDTVLCNALIHAYAWCGSLALSKQVFNEMGC 724
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
R +V S+ A +G+ +DA+ + +++ S TF L+ + G +D
Sbjct: 725 RDLVSWNSMLKSYAI----HGQTKDAVELFQRMNVCTDSA----TFVVLLSACSHVGFVD 776
Query: 473 DCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ + +F M D P + + M+ +Y +A+EL +
Sbjct: 777 EGVKLFNCMSDDHGVVPQLDHYSCMVDLYGGAGKIFEAEELIRKM--------------- 821
Query: 531 APLKPDEYTYSSML 544
P+KPD +SS+L
Sbjct: 822 -PMKPDSVIWSSLL 834
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 24/254 (9%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D++ VYT ++ L KAG+ EA + M+E PD +Y+ + +L + + E
Sbjct: 256 DVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEA-GCAPDPVSYNVIIYSLCKDNRVSEA 314
Query: 284 VKLIERMRQKP-----------------SKRIKN----MHRKNWDPVLEPDLVVYNAVLN 322
+L+++ ++ S+R++ + R P +V Y+AV++
Sbjct: 315 KELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVID 374
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+ + + V +++R++G P TY ++ + G+ D E F++M + G A+
Sbjct: 375 GLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCAL 434
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ Y +L+R + K++EA+A + M RG+ + LC R ++A L++
Sbjct: 435 DVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLM 494
Query: 443 EKI--KSLRHSKPL 454
EK+ +SL S P+
Sbjct: 495 EKMNFESLPDSDPV 508
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/467 (19%), Positives = 189/467 (40%), Gaps = 54/467 (11%)
Query: 196 LLKGLGDKGSWRQAMSVL-DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
LL+ + G R+A V D + L D F Y L+ KA + +A+ + M
Sbjct: 23 LLEVFVNDGCHREAYRVFKDELVTLFRPDD----FTYGTLIRGFCKAEQIPQAVNLLGEM 78
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ + P I + S+ L ++ + +++ +M D ++PD
Sbjct: 79 -KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQM---------------IDMKVKPDA 122
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+Y V+ ++ F+++ +SG P TY + + + ++ K++ H+ F +
Sbjct: 123 FLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 182
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G + +TY +V + + G+I++A++ +R ++ G + S+Y L LC + R
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 493
+A + E I +T I G +D+ ++ M + C P+ + N
Sbjct: 243 HDEARELFEMAAGDVQDV---IVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYN 299
Query: 494 AMLKVYSRNDMFSKAKELFEET---------------------TRANSSGYTFL-----S 527
++ +++ S+AKEL ++ +R L +
Sbjct: 300 VIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLET 359
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
GD A P TYS++++ A + + V + M +GC D + ++ + G+
Sbjct: 360 GDRA---PSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGR 416
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
F + E G + + ++ + ++A+A+I MA
Sbjct: 417 LDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMA 463
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/410 (18%), Positives = 159/410 (38%), Gaps = 26/410 (6%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
+ PD Y ++ + Q + +++ +G+ P+ T+G + + + D
Sbjct: 47 LFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKA 106
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
+ F +M A Y V++ + K++ A + M Q G + Y L
Sbjct: 107 LQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHS 166
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 488
L +W+ + E++ S HS L +T+ ++ G ID +S+ + +K
Sbjct: 167 LFKACKWEQGHQIFEEMLSKGHSPEL-VTYATVVNGYCKAGRIDQALSLMRRLKGTGRSP 225
Query: 489 IGTV-NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
G++ + ++ ++D +A+ELFE +GD D Y+S +
Sbjct: 226 SGSLYSTLIDGLCKHDRHDEARELFE-----------MAAGD----VQDVIVYTSFISGL 270
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
A + + + V+ M +GC D + ++ + + + D +E +P
Sbjct: 271 CKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGV 330
Query: 608 LFFTEMLIQAIVQS-NYEKAVALINAMA----YAPFHITERQWTELFESNEDRISRDKLE 662
T +L+ + +S E+A ++ M AP +T + DR+ D
Sbjct: 331 PVCT-VLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGL-CKADRL--DDAY 386
Query: 663 KLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDI 712
+L + +T + + A + R ++ R+L H A+D+
Sbjct: 387 VVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDV 436
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/461 (19%), Positives = 182/461 (39%), Gaps = 63/461 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ L + GR EA+ + + MLED L P+ Y ++ + ++G + L+ +M
Sbjct: 182 FTTLMNGLCREGRVVEAVALLDRMLED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 240
Query: 291 RQ----KPSKRIKNMHRKN-----------WDPV------------LEPDLVVYNAVLNA 323
+ KP+ I + R+ W + PD+V YNA++NA
Sbjct: 241 EEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINA 300
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
V ++ ++ ++ G+ PS TY ++ + + D F MA G +
Sbjct: 301 FVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPD 360
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+T+ L+ + ++++ + + M + G+V Y L C G A +++
Sbjct: 361 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 420
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK------------DHCEPNIGT 491
++ S P +T L+ D G + D + +F+ M+ + EP++ T
Sbjct: 421 EMVS-SGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQT 479
Query: 492 VNAMLKVYSRNDMFSKAKELFEET----------------------TRANSSGYTFLSGD 529
N ++ F +A+EL+EE +R + + F S
Sbjct: 480 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMG 539
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
P+ T+++++ A + + ++ M G + + L+ + G +
Sbjct: 540 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNIN 599
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
F ++ +G P + ML + ++AVA++
Sbjct: 600 GALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAML 640
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 118/285 (41%), Gaps = 24/285 (8%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F ++ K G P+ T+ + + + + F +M K +T+ L+
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPN----VVTFTTLMNGLCR 191
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
EG++ EAVA + M + G+ Y + +C G A+ ++ K++ + H KP +
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251
Query: 457 TF-----TGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAK 509
+ T +I G + + Q M + P++ T NA++ + + F +A+
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
EL++E + P TYSSM++ ++ + E+++ MA GC
Sbjct: 312 ELYDEMLPRG-------------IIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 358
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
D L+ RA + + EAG + + + +T ++
Sbjct: 359 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 403
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/394 (17%), Positives = 152/394 (38%), Gaps = 27/394 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P ++ + ++ V + V + +++ + +A ++ + M+ K
Sbjct: 76 PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALST 135
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F K+ K G +T+ L+ E +I+EA+ M + VV + L LC
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPNVV----TFTTLMNGLCR 191
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNI 489
GR +A+ +++++ +P +IT+ ++ G +++ + M++ H +PN+
Sbjct: 192 EGRVVEAVALLDRMLE-DGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNV 250
Query: 490 GT-----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
M+ + + +S+A++L +E + PD TY++++
Sbjct: 251 VIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKK------------ISPDVVTYNALI 298
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
A ++ E +Y M G ++ ++ + + EH F + G
Sbjct: 299 NAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 358
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 664
P + F ++ + + L++ M A +T L + + L
Sbjct: 359 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDL 418
Query: 665 LNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
L + + + +T + L L LC + K +D
Sbjct: 419 LQEMVSSGVCPNVVTCNTL---LDGLCDNGKLKD 449
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 31/238 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF--------VYTKLLAILGKAGRPHEA 247
LL GL D G + A+ + + K D F Y L++ L G+ EA
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEA 496
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
++ M + PD Y+SV L + L E ++ + M K
Sbjct: 497 EELYEEMPHR-GIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKS------------- 542
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P++V + ++N + + +F ++ + G+ +A TY + + G +
Sbjct: 543 --FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNING 600
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+ F++M SG +T + ++ W + ++ AVA + +++ SV Y+L
Sbjct: 601 ALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQM-------SVGYQL 651
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 138/341 (40%), Gaps = 50/341 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P+ V +NA+++ + +K +F + GL PS +YG+ ++ + ++ ++DL
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 388
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F+ +M ++G +G +TY ++ + G ++EAV + M + G+ Y L
Sbjct: 389 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 448
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ------HMKD 483
C GR++ A +V +I + S P I ++ LI + G + + I I++ H +D
Sbjct: 449 CKVGRFKTAKEIVCRIYRVGLS-PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 484 H----------CE--------------------PNIGTVNAMLKVYSRNDMFSKAKELFE 513
H C+ PN + + ++ Y + KA +F+
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
E T+ P +TY S+L+ E K + +D
Sbjct: 568 EMTKVGH-------------HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 614
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ LL ++G F +++ +P +T ++
Sbjct: 615 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 173/435 (39%), Gaps = 37/435 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P I Y++V + G K ++L++ M+ K ++ D+ YN ++
Sbjct: 226 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG---------------VDADVCTYNMLI 270
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S++ + + + +RK + P+ TY + GK + + +M G +
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+T+ L+ EG EA+ ME +G+ + Y L LC N + A
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 442 VEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 499
++K R+ + IT+TG+I G +D+ + + M KD +P+I T +A++ +
Sbjct: 391 YMRMK--RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 448
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
+ F AKE+ R L P+ YS+++ + +
Sbjct: 449 CKVGRFKTAKEIVCRIYRVG-------------LSPNGIIYSTLIYNCCRMGCLKEAIRI 495
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
Y+ M L G D L+ +AGK E + G +P+ + F + LI
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF-DCLINGYG 554
Query: 620 QSNYE-KAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEI 678
S KA ++ + M H T + L + + EK L +L AA +
Sbjct: 555 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 614
Query: 679 TVSNLSRALHALCRS 693
+ L L A+C+S
Sbjct: 615 MYNTL---LTAMCKS 626
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 113/271 (41%), Gaps = 15/271 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P + NA+L + V S + V+ K++ K + P AT+ + + V+ G ++
Sbjct: 154 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 213
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+KM KSG A +TY ++ + ++G+ A+ + +M+ +GV Y L L
Sbjct: 214 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C + R L++ ++ R P E+T+ LI + G + + M PN
Sbjct: 274 CRSNRIAKGYLLLRDMRK-RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T NA++ + F +A ++F + L P E +Y +L+
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMM-------------EAKGLTPSEVSYGVLLDGLC 379
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+++ Y M +G + + + ++
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 158/411 (38%), Gaps = 42/411 (10%)
Query: 138 YFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLL 197
Y A +E H + VLV L + A+ +F+R M G++ L+
Sbjct: 496 YEAMILEGHTRDHF-----TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 198 KGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED 257
G G+ G +A SV D + + + F Y LL L K G EA + L+
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHH---PTFFTYGSLLKGLCKGGHLREAEKF----LKS 603
Query: 258 CNLYP---DIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKNW 306
+ P D Y+++ + + G L + V L M Q+ + I + RK
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Query: 307 DPV-------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ + P+ V+Y ++ + QWK + +Q+ G P T
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
++ + GK + ++ +M TY +L+ + + ++ + R++
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID- 472
G++ + L +C + + + +++ R + TF LI G I+
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFIC-RGVEVDRYTFNMLISKCCANGEINW 842
Query: 473 --DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
D + + + + + T +AM+ V +RN F +++ + E ++ S
Sbjct: 843 AFDLVKVMTSLGISLDKD--TCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 119/301 (39%), Gaps = 17/301 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F+ + G PS T + +++SG+ V F ++M K T+ +L+
Sbjct: 145 IFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLC 204
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
EG ++ ++ ME+ G T Y + C GR++ A+ +++ +KS +
Sbjct: 205 AEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADV 263
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+ LI I + + M K PN T N ++ +S A +L E
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 323
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
L P+ T++++++ + ++ ++ M G +
Sbjct: 324 MLSFG-------------LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 633
+ LL + + L + + G + +T M I + ++ + ++AV L+N M
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM-IDGLCKNGFLDEAVVLLNEM 429
Query: 634 A 634
+
Sbjct: 430 S 430
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 168/405 (41%), Gaps = 32/405 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT ++ L K + +A+ + + + P IA Y+++ L ++G L+E + L+
Sbjct: 167 TYTAIVDWLAKNKKIQDAVALMEKITAN-GCTPTIATYNALLNGLCKMGRLEEAIDLL-- 223
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
RK D PD+V Y ++++ + + +FK++ GL
Sbjct: 224 -------------RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDT 270
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y + +LQ+GK ++ M G +T ++ + G+I AV ++
Sbjct: 271 VCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKS 330
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME RG+ VY L LC + A+ ++ ++K P IT+ LI G
Sbjct: 331 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK-AFCTPDTITYNILIDGLCKSG 389
Query: 470 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
++ + F M + C+P++ T N ++ + + A +F++ + ++ S
Sbjct: 390 DVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCS------- 442
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
P+ TY +++ Q ++ M GC D ++ L+ ++GK
Sbjct: 443 ------PNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKL 496
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
FD + +G + + T ++ + ++AV+L NA+
Sbjct: 497 EGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAI 540
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 145/336 (43%), Gaps = 21/336 (6%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + + +K + M GL+ L++GL G QA SV +
Sbjct: 241 LIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 300
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + + ++ L KAGR A+RIF M E L P+ Y ++ L + +
Sbjct: 301 CVPDVVT---LSTMIDGLCKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKM 356
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++++ +M++ PD + YN +++ S + F ++
Sbjct: 357 DCALEMLAQMKK---------------AFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 401
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
++G KP TY + + ++G D F M+ S + +TY L+ + ++
Sbjct: 402 LEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQL 461
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+A ++M++RG + VY L LC +G+ + ++ ++++ R T T
Sbjct: 462 TKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME--RSGVANSQTRTR 519
Query: 461 LIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML 496
LI +D+ +S+F ++ P+ N+++
Sbjct: 520 LIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSII 555
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 149/381 (39%), Gaps = 51/381 (13%)
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSA 349
R K + N+ + PD+ +N ++ + + + F V +++ + G+ PS
Sbjct: 71 RTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSL 130
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ L + + +SGK + F +G I TY +V + KI +AVA +
Sbjct: 131 KTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEK 190
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI------------------------ 445
+ G T + Y L LC GR ++A+ ++ KI
Sbjct: 191 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 250
Query: 446 ----------KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+LR + +T LI + G I S+++ M C P++ T++
Sbjct: 251 SFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 310
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
M+ D KA R ++ F S + L P+E YS+++ A + +
Sbjct: 311 MI------DGLCKAG-------RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 357
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ M + C D + L+ ++G FD +LEAG P ++ +L
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD-VYTYNIL 416
Query: 615 IQAIVQS-NYEKAVALINAMA 634
+ ++ N + A + + M+
Sbjct: 417 VSGFCKAGNTDAACGVFDDMS 437
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 22/326 (6%)
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL---NACVPSHQWKGVFWVFKQ 339
++K++ R RQ + N D + PD + Y+ ++ N C ++Q + W F +
Sbjct: 49 MLKVLRRGRQWEFSQQIAEDMANAD--VRPDNITYSTLISCANRC--NYQDAAMAW-FDR 103
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ ++G P TY ++V + GKYD + ++ ++G +TY +VR F G
Sbjct: 104 MHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGY 163
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
I AV+ M+ GV A VY + CL GR A+ V E+++ KP +T +
Sbjct: 164 IRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMER-EGVKPNAVTLS 222
Query: 460 GLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
++ + G++ + + +FQ ++ ++ NA+LK+ + S+A++ E T
Sbjct: 223 TVMETYSRCGNVMEGLEVFQRLRQGVACDVIVYNAVLKMCREAGLASEAEQYLREMTE-- 280
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
SG+ +P+++TY +M+ A + M +G Q+D + LL
Sbjct: 281 -SGH----------QPNDWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQIDVMAYTSLL 329
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIP 605
A + + ++ D + P
Sbjct: 330 QAYGNAKEYNKVQEILDEMTSVNCAP 355
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T G M++L G G R A+S+ + + G + D VY ++A LG+AGR AL
Sbjct: 150 TYGTMVRLF---GRAGYIRAAVSIFEEMKGSGVQPD---AIVYNIMIACLGRAGRMGHAL 203
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
++F M E + P+ +V T + G + E +++ +R+RQ
Sbjct: 204 KVFEEM-EREGVKPNAVTLSTVMETYSRCGNVMEGLEVFQRLRQG--------------- 247
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
+ D++VYNAVL C + +++ +SG +P+ TY + V + G
Sbjct: 248 -VACDVIVYNAVLKMCREAGLASEAEQYLREMTESGHQPNDWTYRNMISVYAKKGMAVEA 306
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAF 394
H F +M ++G I + Y L++A+
Sbjct: 307 HRTFSQMVEAGYQIDVMAYTSLLQAY 332
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKE 510
+P IT++ LI + + D ++ F M + C P++ T + M+ VY + + +A
Sbjct: 75 RPDNITYSTLISCANRCNYQDAAMAWFDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIA 134
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
L+E R +G+ KPD+ TY +M+ A +++ M SG Q
Sbjct: 135 LYE---RVKQAGW----------KPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQP 181
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
D + ++ RAG+ F+ + G P+ + + ++
Sbjct: 182 DAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTLSTVM 225
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA--- 594
YTY+ ML+ QWE+ + + + MA + + D ++ L+ S A +C+ + A
Sbjct: 44 YTYNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNITYSTLI---SCANRCNYQDAAMAW 100
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---INAMAYAPFHITERQWTELF-E 650
FD + EAG +P + ++ M+ Y++A+AL + + P +T LF
Sbjct: 101 FDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGR 160
Query: 651 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 686
+ R + E++ + +A I ++ L RA
Sbjct: 161 AGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRA 196
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 151/360 (41%), Gaps = 34/360 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L+ L D G +QAM VLD K YT L+ K +A+++ + M
Sbjct: 165 ILRTLCDSGKLKQAMEVLDRQL---QKECYPDVITYTILIEATCKESGVGQAMKLLDEM- 220
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD+ Y+ + + + G L E +K + M PS +P+++
Sbjct: 221 RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM---PSYGC------------QPNVI 265
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N +L + + +W + + + G PS T+ + + + + G + KM
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +L+Y L+ F +E K++ A+ + M RG Y L LC +G+
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 385
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ ++ ++ S + P+ IT+ +I G + I + M + +P+I T ++
Sbjct: 386 DVAVEILNQLSS-KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 444
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ SR +A + F + +G ++P+ TY+S++ + Q +
Sbjct: 445 LVSGLSREGKVDEAIKFFHDL-------------EGLGIRPNAITYNSIMLGLCKSRQTD 491
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 185/475 (38%), Gaps = 53/475 (11%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D+ T L+ + G+ +A + + LE PD+ Y+ + + G +
Sbjct: 88 DIPDIIPCTSLIRGFCRIGKTKKATWVMEI-LEQSGAVPDVITYNVLISGYCKSGEIDNA 146
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF-KQLRK 342
+++++RM + PD+V YN +L S + K V +QL+K
Sbjct: 147 LQVLDRMN------------------VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 188
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
P TY + +E + + +M G +TY VL+ +EG+++E
Sbjct: 189 E-CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--LRH-SKPLEITFT 459
A+ + NM G + + +C+ GRW DA EK+ S LR P +TF
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA----EKLLSDMLRKGCSPSVVTFN 303
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI G + I I + M H C PN + N +L + + +A E +
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363
Query: 519 N--------SSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQWEYF 556
++ T L DG P TY+++++ + + E
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
+ M G + D ++ L+ SR GK F L G P+ + + +++
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483
Query: 617 AIVQSNYEKAVALINAMAYAPFHITERQWTELFES-NEDRISRDKLEKLLNALCN 670
++A+ + M TE +T L E + ++++ L+ LLN LC+
Sbjct: 484 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALD-LLNELCS 537
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 21/262 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L++ L + + + + M G LL G + +A+ LD +
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVG 278
D+ Y LL L K G+ A+ I N L + C+ P + Y++V L +VG
Sbjct: 364 GCYPDI---VTYNTLLTALCKDGKVDVAVEILNQLSSKGCS--PVLITYNTVIDGLSKVG 418
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ +KL++ MR+K L+PD++ Y+++++ + F
Sbjct: 419 KTERAIKLLDEMRRKG---------------LKPDIITYSSLVSGLSREGKVDEAIKFFH 463
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
L G++P+A TY M + +S + D +F M TY +L+ EG
Sbjct: 464 DLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 523
Query: 399 KINEAVAAVRNMEQRGVVGTAS 420
EA+ + + RG+V +S
Sbjct: 524 LAKEALDLLNELCSRGLVKKSS 545
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 126/331 (38%), Gaps = 37/331 (11%)
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
++++G+ + +F M G+ + L+R F GK +A + +EQ G V
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y L C +G +A+ V++++ + P +T+ ++ + D G + + +
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEVL 182
Query: 479 -QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
+ ++ C P++ T +++ + +A +L +E S KPD
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS-------------KPDV 229
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
TY+ ++ + + M GCQ + H +L G+ E
Sbjct: 230 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 289
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI----------NAMAYAPF---HITERQ 644
+L G P + F ++ Q +A+ ++ N+++Y P E++
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349
Query: 645 WTELFESNEDRISRD------KLEKLLNALC 669
E + +SR LL ALC
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 380
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 135/328 (41%), Gaps = 20/328 (6%)
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K +++++ + D ++PD+V N ++ A +HQ + + +++ + P T+
Sbjct: 177 KLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTL 236
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
M+ ++ G + KM ++G + +T VL+ + + G++ +A+ ++ G
Sbjct: 237 MQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGF 296
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
Y CLC NG A+ V++ + H P T+ +I G +D+
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD-PDVFTYNTVINCLSKNGELDEAK 355
Query: 476 SIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
I M D C P+ T N ++ + +A +L E T L
Sbjct: 356 GIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG-------------LS 402
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
PD YT++ ++ A +++ M SGC D+ + L+ GK L +A
Sbjct: 403 PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGK---LVNA 459
Query: 595 FDSL--LEAGEIPHPLFFTEMLIQAIVQ 620
D L +E+ P +I A+ +
Sbjct: 460 LDLLKEMESNGCPRSTVTYNTIIDALCK 487
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 157/412 (38%), Gaps = 69/412 (16%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L G A+ V+D + L++ D F Y ++ L K G EA I N M+ D
Sbjct: 310 LCQNGHVSHALKVMDLM--LQEGHD-PDVFTYNTVINCLSKNGELDEAKGIVNQMV-DRG 365
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
PD ++++ V L L+E + L + K L PD+ +N
Sbjct: 366 CLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG---------------LSPDVYTFNI 410
Query: 320 VLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
++NA C G+ +F++++ SG P TY + ++ + GK + ++M +
Sbjct: 411 LINALCKVGDPHLGI-RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESN 469
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G +TY ++ A ++ +I EA M+ G+ +A + L LC R DA
Sbjct: 470 GCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDA 529
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKV 498
++E Q +K+ +P+ T N++L
Sbjct: 530 TELIE-----------------------------------QMVKEGLQPSNITYNSILTH 554
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
Y + KA ++ E T ++G+ D TY +++ A + +
Sbjct: 555 YCKQGDLKKAADILETMT---ANGFEI----------DVVTYGTLINGLCKAGRTQVALK 601
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ +GM + G + + ++ R F + E GE P L +
Sbjct: 602 LLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTY 653
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 152/407 (37%), Gaps = 64/407 (15%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ Y + L + G AL++ +LML++ + PD+ Y++V L + G L E ++
Sbjct: 300 QVTYNTFVHCLCQNGHVSHALKVMDLMLQEGH-DPDVFTYNTVINCLSKNGELDEAKGIV 358
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+M D PD +N ++ A ++ + + ++L GL P
Sbjct: 359 NQM---------------VDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSP 403
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
T+ + + + + G L F +M SG A +TY +L+ GK+ A+ +
Sbjct: 404 DVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLL 463
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ ME G + Y + LC R ++A V +++ + S+ +TF LI
Sbjct: 464 KEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS-AVTFNTLIDGLCK 522
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
IDD A EL E+ +
Sbjct: 523 AKRIDD----------------------------------ATELIEQMVKEG-------- 540
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
L+P TY+S+L + + + M +G ++D + L+ +AG+
Sbjct: 541 -----LQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 595
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + G P P + ++ ++N A++L M
Sbjct: 596 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMT 642
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 23/227 (10%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+S + L+ L KA R +A + M+++ L P Y+S+ + G LK+
Sbjct: 508 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKE-GLQPSNITYNSILTHYCKQGDLKKAAD 566
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++E M E D+V Y ++N + + + + + +R G+
Sbjct: 567 ILETMTANG---------------FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 611
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAV 404
+P+ Y ++ + + FR+M + GE ALTYK++ R G I EA
Sbjct: 612 RPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAF 671
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-----LVVEKIK 446
+ M +G + S + LA L N G D + L++EK K
Sbjct: 672 DFLVEMVNKGFMPEFSSFRMLAEGLLNLG-MDDYLISAIELIIEKAK 717
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 159/384 (41%), Gaps = 25/384 (6%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK + + A ++D L + + F M G+ +L G + G
Sbjct: 204 EKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLN 263
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A S+ + G + + + +T L+ L K G EA R+F +M E+ + PD Y
Sbjct: 264 EATSLFKQMIG---RNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN-GVEPDAYTY 319
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ + E KL + M K P + VYN ++N S
Sbjct: 320 SALMDGYCLQSQMDEAQKLFDIMVGKG---------------FAPSVRVYNILINGHCKS 364
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + ++ L P TY M+ Q+G+ + + F++M G ++TY
Sbjct: 365 RRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITY 424
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+L+ + G ++EA ++ M++ + +Y L +CN G+ + A + +
Sbjct: 425 SILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNL-F 483
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 506
++ +P +T+T +I + G ++ +F+ M + C PN T N ++ + RN S
Sbjct: 484 VKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPS 543
Query: 507 KAKELFEETT----RANSSGYTFL 526
A L EE A+SS + L
Sbjct: 544 NAVRLIEEMVGRGFSADSSTFQML 567
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 128/317 (40%), Gaps = 30/317 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P L+ Y ++ + K++ + G KP Y ++ + + + + F
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF 233
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M G +TY ++ F G++NEA + + M R V+ + L LC
Sbjct: 234 FSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHM-KDHCE 486
G +A V E + +P T++ L MDG +D+ +F M
Sbjct: 294 EGMILEARRVFEMMTE-NGVEPDAYTYSAL----MDGYCLQSQMDEAQKLFDIMVGKGFA 348
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ N ++ + ++ ++AK L E + L PD TYS++++
Sbjct: 349 PSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD-------------LTPDTVTYSTLMQG 395
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL--LEAGEI 604
A + + + ++K M G D ++ LL + G L+ AF L ++ +I
Sbjct: 396 FCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGH---LDEAFRLLKAMQESKI 452
Query: 605 -PHPLFFTEMLIQAIVQ 620
PH + +LIQ +
Sbjct: 453 EPHICIY-NILIQGMCN 468
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 112/262 (42%), Gaps = 19/262 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS---GLKPSAATYGLAMEVMLQSGKYD 366
+ P++ ++N C+ V + F L K GL+P+ T+G + + K
Sbjct: 100 IRPNVYTLTILIN-CLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKII 158
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ F ++ K G A +TY +++ + G A+ ++ ME++G Y +
Sbjct: 159 DAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
LC + R +AM ++ + P +T++ ++ + G +++ S+F+ M +
Sbjct: 219 DSLCKDRRANEAMYFFSEMVD-QGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNV 277
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PN T ++ + M +A+ +FE T ++PD YTYS++++
Sbjct: 278 MPNTVTFTILVDGLCKEGMILEARRVFEMMTENG-------------VEPDAYTYSALMD 324
Query: 546 ASATAHQWEYFEYVYKGMALSG 567
Q + + ++ M G
Sbjct: 325 GYCLQSQMDEAQKLFDIMVGKG 346
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 159/372 (42%), Gaps = 33/372 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL--I 287
V+ ++ + ++GR +A ++ + M D + PD+ +++++ + G L V L +
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTM-HDRGIDPDLVSFNTLINARSKSGCLAAGVALDLL 281
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD++ YN +++AC S + VF+ + S +P
Sbjct: 282 FEVRQSG---------------LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRP 326
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + V + GK + FR++ + G A+TY L+ AF +EG +++
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTC 386
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ + G Y + GR A+ + ++++++ P +T+T +I S
Sbjct: 387 EQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAM-GCTPDAVTYTVMIDSLGK 445
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
I + + + M D +P + +A++ Y++ + A+ F+ +SG
Sbjct: 446 MNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMI---ASG---- 498
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+KPD Y ML+ A + E +Y+ M + D + LLV ++
Sbjct: 499 ------VKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKED 552
Query: 587 KCHLLEHAFDSL 598
KC +E +
Sbjct: 553 KCEEIEEVIQDM 564
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/427 (18%), Positives = 176/427 (41%), Gaps = 33/427 (7%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S+ +Y +++ K G P A R+ + L+ ++ + G++ L ++ L
Sbjct: 709 SKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEIL 768
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++ +RQ + R+ W NA+++A S ++ VF + K+G
Sbjct: 769 VKGLRQA-----SGIDRRIW-----------NALIHAYAESGLYEKARAVFDNMIKTGPL 812
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ + M ++ G+ D ++ ++ I T +L+ AF + G + E +
Sbjct: 813 PTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKI 872
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M+ G + +Y + LC++ R++D L++ +++ L I L+
Sbjct: 873 YNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAI-LNALLNMYT 931
Query: 467 DGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G+ D +++ ++ EP+ T N ++ +Y R+ F G+T
Sbjct: 932 AAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRS---------FRP-----EEGFTL 977
Query: 526 LSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
L+ G L P +Y S+L ASA A E + +++ M QL+++ + ++
Sbjct: 978 LNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRN 1037
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
AG E+ + E G P ++ +A ++N + + ++
Sbjct: 1038 AGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLP 1097
Query: 645 WTELFES 651
++ +F++
Sbjct: 1098 YSTVFDA 1104
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 107/278 (38%), Gaps = 52/278 (18%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
LR +G + + M V +SG++D + M G +++ L+ A + G
Sbjct: 212 LRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGC 271
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEIT 457
+ VA ++ + +R S +P IT
Sbjct: 272 LAAGVA------------------------------------LDLLFEVRQSGLRPDVIT 295
Query: 458 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+ LI + +++D +++F+ M C P++ T NAM+ V+ R +A+ LF E
Sbjct: 296 YNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELV 355
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
PD TY+S+L A A + E+ + + +G + ++ +
Sbjct: 356 EKG-------------FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYN 402
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ + G+ L +D + G P + +T M+
Sbjct: 403 TMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMI 440
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 172/400 (43%), Gaps = 43/400 (10%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ + D V +K KR + + ++ +A + EA+ FN+M + ++ P++AA
Sbjct: 70 RQYQLMWDVVKVMKSKRMVNVE-TFCIIMRKYARAQKVEEAVYTFNIM-DKYDVPPNLAA 127
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV---LEPDLVVYNAVLNA 323
++ GLL L K SK ++ ++ +D + PD Y+ +L
Sbjct: 128 FN---------GLLSALCK---------SKNVRK-AQEIFDSIKDRFVPDSKTYSILLEG 168
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
+F+++ +G +P TYG+ ++V+ ++G+ D +M +
Sbjct: 169 WGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPT 228
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
Y VLV + E +I +AV+ ME G+ +VY L C R ++ V+
Sbjct: 229 PFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLN 288
Query: 444 KIKSLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRN 502
++ + P TF +I+SS+ G G D+ +F M CEP+ T M+K++
Sbjct: 289 EMDC-KGVTPNSRTF-NIILSSLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCER 346
Query: 503 DMFSKAKEL--FEETTRANSSGYTF-LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
D KA ++ + + R S +TF + +G K D +LE E +
Sbjct: 347 DELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLE-----------EMI 395
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
KG+ SG + + LL++ R L+ + L+
Sbjct: 396 EKGIRPSGVTFGRLRQ--LLIKEGREDVLKFLQKKINVLV 433
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 37/291 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-----YTKLLAILGKAGRPHEALRI 250
LL L + R+A + D +K RFV Y+ LL GK +A I
Sbjct: 131 LLSALCKSKNVRKAQEIFD---------SIKDRFVPDSKTYSILLEGWGKDPNLPKAREI 181
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW- 306
F M+ + PDI Y + L + G + E + ++ M KP+ I ++ +
Sbjct: 182 FREMVSN-GCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYG 240
Query: 307 ------DPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
D V +EPD+ VYNA++ A +++ K V+ V ++ G+ P++
Sbjct: 241 IENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSR 300
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + + ++ G+ D + F +M K E A TY ++++ F E ++ +A+ + M
Sbjct: 301 TFNIILSSLIGRGETDEAYRVFLRMIKVCEP-DADTYTMMIKMFCERDELKKALKVWKYM 359
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+ + + + + L LC G A +++E++ + +P +TF L
Sbjct: 360 KLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIE-KGIRPSGVTFGRL 409
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/470 (20%), Positives = 179/470 (38%), Gaps = 41/470 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V+ +L L AG+ +A+ F M + C PD Y+++ L + L + ++L+E
Sbjct: 198 VHKSILRGLCDAGQCSDAVLHFREMSKTCP--PDSVTYNTMINGLSKSDRLDDAIRLLEE 255
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M D P++ YN VL+ +++ + W+ +Q+ G P
Sbjct: 256 M---------------VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDV 300
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+Y + + + + D KM + G +TY LV F G ++ AV VR
Sbjct: 301 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 360
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M +RG A Y + C + A V++ + P I ++ +I G
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ-TGCPPDAINYSTIISGFCKAG 419
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ + + + M + C P++ ++ ++ + A+EL +
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI------------ 467
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL---LVEASRA 585
G PD YS ++ A A + E M + C D + + L ++ R
Sbjct: 468 -GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRI 526
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 645
LL FD + AG +P + ++ ++ +N + A ++ M A +
Sbjct: 527 NDAFLL---FDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTY 583
Query: 646 TELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
+ L + DK + + C A + +T + L + LC+ K
Sbjct: 584 SALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTL---IDGLCKINK 630
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 144/353 (40%), Gaps = 32/353 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y LL + K A ++ + M++ P++ +Y++V L + + E V L+E
Sbjct: 1089 FTYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVSYNTVIAGLCKATKVHEGVLLLE 1147
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M PD+V +N +++A +++ + +F +++SG P+
Sbjct: 1148 QMLSNNCV---------------PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPN 1192
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMA-KSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + + +S ++D R+M K G + +TY ++ + +++ A
Sbjct: 1193 LVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLF 1252
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M G+ Y + LC R+ D V ++ P IT+ LI
Sbjct: 1253 LQMLSDGLAPDDVTYSIVISSLCK-WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 1311
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G++D + I Q + P++ T + + S+ +A EL E RA
Sbjct: 1312 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG------- 1364
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
L PD TY+++L+ A E +++ M GC+ D + L+
Sbjct: 1365 ------LVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/523 (20%), Positives = 197/523 (37%), Gaps = 72/523 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E +W + L+ ++ MN+ GL G +L+GL D G
Sbjct: 154 EGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCS 213
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A+ + K Y ++ L K+ R +A+R+ M+++ P++ +Y
Sbjct: 214 DAV----LHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN-GFAPNVFSY 268
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++V + ++ + L+E+M + PD+V Y V+N
Sbjct: 269 NTVLHGFCKANRVENALWLLEQMVTRGCP---------------PDVVSYTTVINGLCKL 313
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
Q V ++ + G +P+ TYG ++ + G D E RKM + G A+TY
Sbjct: 314 DQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY 373
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
++ F + A ++ M Q G A Y + C G+ ++A ++E++
Sbjct: 374 NNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIR 433
Query: 448 LRHSKPLEITFTGLIISSMDGGHID------------DC------ISIFQH--------- 480
R +P + LI + ID DC SI H
Sbjct: 434 -RGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLP 492
Query: 481 ---------MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+K+ C P++ T N+++ ++ + A LF+ R ++G
Sbjct: 493 EAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFD---RMRAAG--------- 540
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
+ PD TYS ++ + + + + + M + C D ++ L+ +AG
Sbjct: 541 -VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKA 599
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAM 633
F +L G P+ L LI + + N E+A ++ M
Sbjct: 600 FDVFQEMLGCGCAPN-LVTYNTLIDGLCKINKVEQAAEMLEIM 641
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 157/391 (40%), Gaps = 28/391 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P++ + +++ + + + K++ + G+ + + + ++ + + K D E
Sbjct: 875 PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934
Query: 372 FRKMAKSGEAI-GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F++M +SG TY +V + + GK+++A V +M +G Y L LC
Sbjct: 935 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
G+ +A +++++ + P +T+ +I G ID+ + + M D C+PN+
Sbjct: 995 KAGKLDEATALLQRM-TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNV 1053
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T +L + + A L E GY P+ +TY+S+L+
Sbjct: 1054 VTYTVLLDAFCKCGKAEDAIGLVEVMVE---KGYV----------PNLFTYNSLLDMFCK 1100
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ E + M GC + + ++ +A K H + +L +P +
Sbjct: 1101 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVT 1160
Query: 610 FTEMLIQAIVQSNYEKAVA-----LINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 664
F +I A+ ++ Y +A LI P +T + L D+ E L
Sbjct: 1161 FNT-IIDAMCKT-YRVDIAYELFNLIQESGCTPNLVT---YNSLVHGLCKSRRFDQAEYL 1215
Query: 665 LNALCNCNAASSEITVSNLSRALHALCRSEK 695
L + S +I N + LC+S++
Sbjct: 1216 LREMTRKQGCSPDIITYN--TVIDGLCKSKR 1244
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/418 (19%), Positives = 163/418 (38%), Gaps = 69/418 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT ++ L K + EA R+ + M++ P++ Y ++ +VG L V+L+ +M
Sbjct: 303 YTTVINGLCKLDQVDEACRVMDKMIQR-GCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361
Query: 291 RQK---PSKRIKN--MH---RKN----WDPVLE--------PDLVVYNAVLNACVPSHQW 330
++ P+ N MH R+N VL+ PD + Y+ +++ + +
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ + +Q+ + G +P A ++ + ++ D E R A + Y +L
Sbjct: 422 REAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSIL 481
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--- 447
+ A + ++ EA + + M + Y + LC + R DA L+ +++++
Sbjct: 482 IHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGV 541
Query: 448 -----------------------------LRHSK--PLEITFTGLIISSMDGGHIDDCIS 476
++ +K P +T++ LI G +D
Sbjct: 542 MPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFD 601
Query: 477 IFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+FQ M C PN+ T N ++ + + +A E+ E + + + P
Sbjct: 602 VFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCT-------------P 648
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
D TY+ ++ A + E V + M GC D+ + LL + L+E
Sbjct: 649 DSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQ 706
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 141/344 (40%), Gaps = 29/344 (8%)
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ V++++ +Y H+ FR + +TY L+ F GKI A M ++G+
Sbjct: 133 LNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGL 192
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
A V+ + LC+ G+ DA+L ++ + P +T+ +I +DD I
Sbjct: 193 KAHAGVHKSILRGLCDAGQCSDAVLHFREMS--KTCPPDSVTYNTMINGLSKSDRLDDAI 250
Query: 476 SIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEE-TTRANSSGYTFLSGDGAPL 533
+ + M D+ PN+ + N +L + + + A L E+ TR G P
Sbjct: 251 RLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTR------------GCP- 297
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
PD +Y++++ Q + V M GCQ + + L+ R G
Sbjct: 298 -PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVE 356
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELF- 649
+ E G P+ + + ++ +++ E+A ++ M P I F
Sbjct: 357 LVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFC 416
Query: 650 ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 693
++ + R + D LE+++ C + A LS + ALC++
Sbjct: 417 KAGKLREAHDLLEQMIRRGCRPDVAC-------LSTLIDALCKA 453
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 156/394 (39%), Gaps = 40/394 (10%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NL 253
K+L+G+ + + A+ DW + + LL L + RP +AL+++ N
Sbjct: 816 KVLQGVRNGDA---ALGFFDWATSQEGYN--HDTYTCNCLLQALLRLKRPKDALQVYRNK 870
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW------D 307
+ N++ H + G +G EL+K + R + + N+ K D
Sbjct: 871 LCCSPNMFTFTILIHGLCRA-GDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLD 929
Query: 308 PVLE------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
LE PD+ Y+ ++++ V S + + + + G P+ TY
Sbjct: 930 SALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSL 989
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + ++GK D ++M +SG + +TY ++ + G+I+EA + M G
Sbjct: 990 LHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGC 1049
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
Y L C G+ +DA+ +VE + + P T+ L+ ++
Sbjct: 1050 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE-KGYVPNLFTYNSLLDMFCKKDEVERAC 1108
Query: 476 SIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
+ M + C PN+ + N ++ + + L E+ N
Sbjct: 1109 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV------------- 1155
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
PD T++++++A ++ + ++ + SGC
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 1189
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K+ + + Y+ L+ L KAG +A +F ML C P++ Y+++ L ++
Sbjct: 571 MKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML-GCGCAPNLVTYNTLIDGLCKIN 629
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+++ +++E MR++ PD + Y ++N + + + + V +
Sbjct: 630 KVEQAAEMLEIMRKQSCT---------------PDSITYTCLINGLCNASRLEEAWRVLR 674
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE----AIGALTYKVLVRA 393
+++ G P TYG + + ++ +LV + ++M + E A GA ++ ++R
Sbjct: 675 EMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRG 733
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 139/343 (40%), Gaps = 36/343 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR ++F M + PD A Y+ + G G KE+V+L
Sbjct: 358 TYRVLLDLYGRQGRFDGVRQLFREM--RTAVPPDTATYNVLFRVFGDGGFFKEVVELFHD 415
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + ++PD+V V+ AC V + + + G+ P+A
Sbjct: 416 MLKTG---------------VQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTA 460
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E + + Y+ + F M + G TY L A+ G EA A
Sbjct: 461 DAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSR 520
Query: 410 MEQR-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M G+ + + L C R DA+ +++ R + P E + G++ +
Sbjct: 521 MSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFN-PDERSLEGVLNAYCIA 579
Query: 469 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTF 525
G ID+ F+ ++ P++ ML +Y+RND ++ A +L EE T RA+S+
Sbjct: 580 GVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVI 639
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
A L EY SS W+ EYV + + GC
Sbjct: 640 -----ASLIKGEYDDSS---------NWQMVEYVLENSTMEGC 668
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 162/451 (35%), Gaps = 52/451 (11%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG----LLK 281
++ YT L+A + EA + + M + + P A Y++V +
Sbjct: 172 RTALSYTSLIAAYARNALHEEARALLDQM-KATGVAPTAATYNTVLAACARATDPPVPFD 230
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
L+ L MR S P + PDL YN +L A + +
Sbjct: 231 MLLGLFAEMRHDAS------------PSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTML 278
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
++G+ P +Y ++ +G E F +MA +G A Y L+ A G
Sbjct: 279 EAGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATA 338
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTG 460
+AVA +R M+ G TA+ Y L GR+ V + + +R + P + T+
Sbjct: 339 DAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDG---VRQLFREMRTAVPPDTATYNV 395
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L DGG + + +F M K +P++ T ++ + A+E+ E TR
Sbjct: 396 LFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREG 455
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ P Y+ ++EA A +E + M G + L
Sbjct: 456 -------------MVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALA 502
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALINAMAYAPF 638
+R G E F + I + LI+A Q S + AV M + F
Sbjct: 503 FAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRF 562
Query: 639 HITERQWTELFESNEDRISRDKLEKLLNALC 669
+ ER LE +LNA C
Sbjct: 563 NPDER----------------SLEGVLNAYC 577
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 139/343 (40%), Gaps = 36/343 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR ++F M + PD A Y+ + G G KE+V+L
Sbjct: 358 TYRVLLDLYGRQGRFDGVRQLFREM--RTAVPPDTATYNVLFRVFGDGGFFKEVVELFHD 415
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + ++PD+V V+ AC V + + + G+ P+A
Sbjct: 416 MLKTG---------------VQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTA 460
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E + + Y+ + F M + G TY L A+ G EA A
Sbjct: 461 DAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSR 520
Query: 410 MEQR-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M G+ + + L C R DA+ +++ R + P E + G++ +
Sbjct: 521 MSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFN-PDERSLEGVLNAYCIA 579
Query: 469 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTF 525
G ID+ F+ ++ P++ ML +Y+RND ++ A +L EE T RA+S+
Sbjct: 580 GVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVI 639
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
A L EY SS W+ EYV + + GC
Sbjct: 640 -----ASLIKGEYDDSS---------NWQMVEYVLENSTMEGC 668
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 162/451 (35%), Gaps = 52/451 (11%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG----LLK 281
++ YT L+A + EA + + M + + P A Y++V +
Sbjct: 172 RTALSYTSLIAAYARNALHEEARALLDQM-KATGVAPTAATYNTVLAACARATDPPVPFD 230
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
L+ L MR S P + PDL YN +L A + +
Sbjct: 231 MLLGLFAEMRHDAS------------PSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTML 278
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
++G+ P +Y ++ +G E F +MA +G A Y L+ A G
Sbjct: 279 EAGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATA 338
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTG 460
+AVA +R M+ G TA+ Y L GR+ V + + +R + P + T+
Sbjct: 339 DAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDG---VRQLFREMRTAVPPDTATYNV 395
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L DGG + + +F M K +P++ T ++ + A+E+ E TR
Sbjct: 396 LFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREG 455
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ P Y+ ++EA A +E + M G + L
Sbjct: 456 -------------MVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALA 502
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALINAMAYAPF 638
+R G E F + I + LI+A Q S + AV M + F
Sbjct: 503 FAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRF 562
Query: 639 HITERQWTELFESNEDRISRDKLEKLLNALC 669
+ ER LE +LNA C
Sbjct: 563 NPDER----------------SLEGVLNAYC 577
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 151/388 (38%), Gaps = 41/388 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ +L A + V + S + T M+ G G+ A ++D V
Sbjct: 101 ILIKKLCADGRVADAERVVEALGPSATIITYNTMVN---GYCRAGNIDAARRMIDSVPFA 157
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
D F Y L+ L G +AL +F+ ML P + Y + +
Sbjct: 158 PDT------FTYNPLIRALCVRGCVLDALAVFDDMLHR-GCSPSVVTYSILLDATCKESG 210
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
K+ V L++ MR K EPD+V YN ++NA V
Sbjct: 211 YKQAVVLLDEMRSKGC---------------EPDIVTYNVLINAMCSQGDVGEALKVLNS 255
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
L G KP A TY ++ + S +++ + KM + A +T+ ++ + ++G
Sbjct: 256 LPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGF 315
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK---PLEI 456
+ A + M + G Y + LC R +A+ +++++ + SK P ++
Sbjct: 316 VGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQV 375
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
TF +I S G D I + M +H C P+I T N ++ + K +E +
Sbjct: 376 TFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKS--CKTEEALDLL 433
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSM 543
S+G L PD TY S+
Sbjct: 434 NLMVSNG----------LCPDTTTYKSL 451
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 121/311 (38%), Gaps = 33/311 (10%)
Query: 346 KPSAATYGLA---MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
KP A + G A + ++Q G+ D ++ SG+ + +L++ +G++ +
Sbjct: 55 KPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVAD 114
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A R +E G T Y + C G A +++ + P T+ LI
Sbjct: 115 ---AERVVEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP----FAPDTFTYNPLI 167
Query: 463 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TR 517
+ G + D +++F M C P++ T + +L + + +A L +E
Sbjct: 168 RALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCE 227
Query: 518 ANSSGYTFL------SGD-GAPL-----------KPDEYTYSSMLEASATAHQWEYFEYV 559
+ Y L GD G L KPD TY+ +L++ ++ +WE + +
Sbjct: 228 PDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKL 287
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
M + C D+ ++ + G + E G P + ++ ++
Sbjct: 288 LTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCK 347
Query: 620 QSNYEKAVALI 630
+ ++A+ L+
Sbjct: 348 ERRVDEAIKLL 358
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 151/342 (44%), Gaps = 35/342 (10%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAIL 238
M+Q G+ E L+ G W A +L + G+K S +V++++LA
Sbjct: 325 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK-----PSSYVFSRILAGF 379
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G +A + M + + PD Y+ + T G+ L + +RMR++
Sbjct: 380 RDRGDWQKAFAVLREM-QASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEE---- 434
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
+EPD+V +N +++A + +F+++R+S P TY + + +
Sbjct: 435 -----------IEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINL 483
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ + +++ V +M + G +TY LV + G+ EA+ + M+ G+ +
Sbjct: 484 LGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPS 543
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD----- 473
++Y+ L G A+ VV+ +K + LE++ L+++S+ +D
Sbjct: 544 PTMYHALVNAYAQRGLADHALNVVKAMK----ADGLEVSI--LVLNSLINAFGEDRRVVE 597
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
S+ Q MK++ P++ T ++K R + F K ++EE
Sbjct: 598 AFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEE 639
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 184/452 (40%), Gaps = 38/452 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R +A L+ + + + + GL + L+ LG G
Sbjct: 221 ESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVA 280
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A L + L + ++R Y LL + G A ++ + M C + PD A Y
Sbjct: 281 EA-EALFLEFFLAGEIKPRTR-AYNALLKGYVRIGSLKNAEQVLDEM-SQCGVAPDEATY 337
Query: 268 HSVAVTLGQVGL---LKELVKLIERMRQKPSKRIKNM------HRKNWDPV--------- 309
+ + G + L+K +E KPS + + R +W
Sbjct: 338 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA 397
Query: 310 --LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
+ PD YN +++ + F ++R+ ++P T+ ++ + G++D
Sbjct: 398 SGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDR 457
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
E F +M +S G TY +++ E+ + A + M+++G+V Y L
Sbjct: 458 AMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVD 517
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCE 486
+GR+++A+ +E +K+ KP + L+ + G D +++ + MK D E
Sbjct: 518 VYGRSGRYKEAIDCIEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLE 576
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+I +N+++ + + +A + + F+ +G L+PD TY+++++A
Sbjct: 577 VSILVLNSLINAFGEDRRVVEAFSVLQ-----------FMKENG--LRPDVITYTTLMKA 623
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
Q++ +Y+ M SGC D+ A L
Sbjct: 624 LIRVEQFDKVPVIYEEMITSGCAPDRKARAML 655
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 121/295 (41%), Gaps = 25/295 (8%)
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+KP Y ++ ++ G + +M++ G A TY +LV A+ G+ A
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
++ ME GV ++ V+ + + G WQ A V+ ++++ +P + F ++I
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA-SGVRP-DRHFYNVMID 412
Query: 465 SMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+ GH D F M++ EP++ T N ++ + + +A ELFEE +N
Sbjct: 413 TFGKYNCLGHAMDA---FDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESN 469
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
P TY+ M+ +WE E + M G + + L+
Sbjct: 470 C-------------PPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLV 516
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 633
R+G+ +++ G P P + L+ A Q + A+ ++ AM
Sbjct: 517 DVYGRSGRYKEAIDCIEAMKADGLKPSPTMY-HALVNAYAQRGLADHALNVVKAM 570
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/395 (17%), Positives = 154/395 (38%), Gaps = 43/395 (10%)
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTL------GQVGLLKELVKLIERMRQKPSKRIKNM 301
LR+ +L+ E + PD+A+Y + +L LL+ L+ + R
Sbjct: 175 LRLLSLLREH-DFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESR---------- 223
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
LEPD +++ +++A + + + GL P + + +
Sbjct: 224 --------LEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGS 275
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALT--YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+G+ F + +GE I T Y L++ + G + A + M Q GV
Sbjct: 276 AGRVAEAEALFLEFFLAGE-IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDE 334
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
+ Y L GRW+ A ++++++++ KP F+ ++ D G ++ +
Sbjct: 335 ATYSLLVDAYTRAGRWESARILLKEMEA-DGVKPSSYVFSRILAGFRDRGDWQKAFAVLR 393
Query: 480 HMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M+ P+ N M+ + + + A + F+ ++PD
Sbjct: 394 EMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEE-------------IEPDVV 440
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
T++++++A + + +++ M S C T + ++ + +E +
Sbjct: 441 TWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEM 500
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
E G +P+ + +T ++ Y++A+ I AM
Sbjct: 501 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAM 535
>gi|298710575|emb|CBJ32006.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 706
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 143/355 (40%), Gaps = 35/355 (9%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + G+ E L ++ G W++A+ +LD + + + DLK Y + GK
Sbjct: 190 MQKVGVKPNEVSYLSVISACSRVGDWKRALLLLDEMIVMGVQPDLK---CYCSAITACGK 246
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GR +AL + N+M +D P+ Y++ G+ G +E +L+ MR
Sbjct: 247 GGRWKQALGLLNIMHKD-GPPPNDYCYNAAISACGKSGQWREAKELLSTMR--------- 296
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG-------------LKP 347
D + PDL+ YN+ ++AC +W+ +F + K+ P
Sbjct: 297 ------DRGVPPDLISYNSAIDACGKGGRWEEGLKIFVGMVKASEVPWDADMGHPKPPTP 350
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
A TYG A+ + ++ + F M K G ++ + G+ E + +
Sbjct: 351 DATTYGAAITACSRGKQWQMALRFLEDMEKKGVERTEGVFQATLAGCARMGRWRECIVTL 410
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M + G+ A+ Y + G WQ A+ +++++ S R + P IT ++ S
Sbjct: 411 DQMRKSGLQPRAAAYNSVITACGRGGEWQRAIAILKQMSS-RGATPDVITLNAVMTSCAQ 469
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
I M+D N+ T+ ++ D+ + +L + T + G
Sbjct: 470 SQRWKQARVILDFMRD--PNNVATIECGDLLFPVLDINGASTDLKDLTVVVDGLG 522
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/408 (19%), Positives = 156/408 (38%), Gaps = 23/408 (5%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE--LVKLIE 288
Y +LA L +AG+ EA+ + M E + D +Y + G+ G+ E L+ L E
Sbjct: 61 YNTILAALSRAGKWEEAVLLLKEM-ETRGIQRDAVSYACLIAACGR-GMQWERALISLAE 118
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK-SGLKP 347
MR D ++ + VY+A ++AC QW+ + + + GL
Sbjct: 119 -MR---------------DVGIKANSFVYSAAIDACAKGRQWQKALILLRDMEVVDGLPA 162
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ Y A + ++G+ KM K G ++Y ++ A G A+ +
Sbjct: 163 NLICYNAAADACGKAGRPGEALALLAKMQKVGVKPNEVSYLSVISACSRVGDWKRALLLL 222
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M GV Y GRW+ A+ ++ I P + + I +
Sbjct: 223 DEMIVMGVQPDLKCYCSAITACGKGGRWKQALGLLN-IMHKDGPPPNDYCYNAAISACGK 281
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G + + M+D P++ + N+ + + + + ++F +A+ +
Sbjct: 282 SGQWREAKELLSTMRDRGVPPDLISYNSAIDACGKGGRWEEGLKIFVGMVKASEVPWDAD 341
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
G P PD TY + + A + QW+ + M G + + L +R G
Sbjct: 342 MGHPKPPTPDATTYGAAITACSRGKQWQMALRFLEDMEKKGVERTEGVFQATLAGCARMG 401
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ D + ++G P + ++ +++A+A++ M+
Sbjct: 402 RWRECIVTLDQMRKSGLQPRAAAYNSVITACGRGGEWQRAIAILKQMS 449
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 141/392 (35%), Gaps = 50/392 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
L+ G W +A+ L + RD+ + FVY+ + K + +AL +
Sbjct: 99 LIAACGRGMQWERAL------ISLAEMRDVGIKANSFVYSAAIDACAKGRQWQKALILLR 152
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M L ++ Y++ A G+ G E + L+ +M++ K P
Sbjct: 153 DMEVVDGLPANLICYNAAADACGKAGRPGEALALLAKMQKVGVK---------------P 197
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+ V Y +V++AC WK + ++ G++P Y A+ + G++
Sbjct: 198 NEVSYLSVISACSRVGDWKRALLLLDEMIVMGVQPDLKCYCSAITACGKGGRWKQALGLL 257
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
M K G Y + A + G+ EA + M RGV Y
Sbjct: 258 NIMHKDGPPPNDYCYNAAISACGKSGQWREAKELLSTMRDRGVPPDLISYNSAIDACGKG 317
Query: 433 GRWQDAM-LVVEKIKS--------LRHSKPLE---ITFTGLIISSMDGGHIDDCISIFQH 480
GRW++ + + V +K+ + H KP T+ I + G + +
Sbjct: 318 GRWEEGLKIFVGMVKASEVPWDADMGHPKPPTPDATTYGAAITACSRGKQWQMALRFLED 377
Query: 481 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
M K E G A L +R + +E + SG L+P
Sbjct: 378 MEKKGVERTEGVFQATLAGCAR---MGRWRECIVTLDQMRKSG----------LQPRAAA 424
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
Y+S++ A +W+ + K M+ G D
Sbjct: 425 YNSVITACGRGGEWQRAIAILKQMSSRGATPD 456
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 113/535 (21%), Positives = 213/535 (39%), Gaps = 77/535 (14%)
Query: 172 AKNWK----FVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD 224
A NWK + M ++G+ + T +L LK + + +A+S + + G D
Sbjct: 94 AGNWKKALELCKKMTENGVGPDLVTHNIVLSALK---NGAQYSKAISYFEIMKGANVTSD 150
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKEL 283
F ++ L K G+ EA+ +FN M E PD+ Y S+ + G ++
Sbjct: 151 ---TFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC 207
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ + M + K P++V YN++L A + +F ++K+
Sbjct: 208 KAIFDLMVAEGVK---------------PNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
GL+P +Y + +S + + E F KM K+ ++Y L+ A+ G + EA
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312
Query: 404 VAAVRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE---ITFT 459
V + ME+ G+ S+ LA C GR + + +E I S+ ++ + +
Sbjct: 313 VGLLHEMEKDGIQPDVVSISTLLAAC----GRCRQ-ITRIETILEAARSRGIDLNTVAYN 367
Query: 460 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
I S + G + + ++ M++ + +P+ T N ++ S+ ++++ FE+ +
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDS 427
Query: 519 NSSGY----------------------TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
S TF S + PD TY+++++A W+
Sbjct: 428 KVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRA 487
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
++K M ++G D A C L AF+ + GE L E + +
Sbjct: 488 WDLFKEMEVNGIPPD-------------AIICSSLMEAFN---KGGEPERVLQLMEFMKK 531
Query: 617 AIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 671
+ N + +I + T + E +S+ IS L +LN L C
Sbjct: 532 KSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKC 586
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 138/327 (42%), Gaps = 17/327 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P YN V+NAC + WK + K++ ++G+ P T+ + + + +Y
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAI 136
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV--YYELAC 427
+F M + T +++ + G+ EA+ +M +R V Y +
Sbjct: 137 SYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMH 196
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
C G+ ++ + + + + KP + + L+ + G + ++IF + K+
Sbjct: 197 SYCIYGQVENCKAIFDLMVA-EGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLR 255
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+I + ++L Y R+ KA+E+F + + NS KP++ +Y+++++A
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEKAREVFNK-MKKNSC------------KPNKVSYNALIDA 302
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+A + + M G Q D + LL R + +E ++ G +
Sbjct: 303 YGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLN 362
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAM 633
+ + + + +YEKA+ L +M
Sbjct: 363 TVAYNSGIKSYLSFGDYEKALELYTSM 389
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 109/274 (39%), Gaps = 24/274 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G + +++ + + D + ++ VY+ L+ K G+ EA F+ M
Sbjct: 404 LISGSSKLGKYTESLRFFE---DMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSM- 459
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLK---ELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
+ +PD+ Y ++ G K +L K +E P I + + ++ EP
Sbjct: 460 KKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEP 519
Query: 313 DLVV-----------------YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ V+ Y ++ +C WK + + L S S T
Sbjct: 520 ERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHV 579
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + + GK + + + F KM S +G TY V++R GK + + ++ ME GV
Sbjct: 580 LNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGV 639
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
T ++ + + A + EKI SLR
Sbjct: 640 HPTLYMFQNVLPYIWRENGMDFAATMQEKISSLR 673
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/500 (20%), Positives = 201/500 (40%), Gaps = 49/500 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLM---FTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+ L + + F + M GL+ FT G L+ GL +A ++LD +
Sbjct: 157 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA---LINGLCKSRRSNEAKALLDEM 213
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ K ++ VY L+ + G EA ++ M+ + P+ Y ++ L +
Sbjct: 214 SCAELKPNV---VVYANLIDGFMREGNADEAFKMIKEMVA-AGVQPNKITYDNLVRGLCK 269
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
+G + L+++M +++ HR PD + YN ++ H K F +
Sbjct: 270 MGQMDRASLLLKQM-------VRDSHR--------PDTITYNLIIEGHFRHHNKKDAFRL 314
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
++ +G+ P+ TY + + + QSG+ + + +M G A Y L+ +
Sbjct: 315 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 374
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
EG ++ A M + V+ Y L L GR +++ +++ R P E
Sbjct: 375 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE-RGLLPNEF 433
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA----KEL 511
T++GLI + G ++ + Q M D +PN +L+ Y ++D K K +
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Query: 512 FEETTRANSSGYTFL----SGDG---APLK-----------PDEYTYSSMLEASATAHQW 553
++ ++ Y L S G A + PD + YSS++
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
E + M+ G + + L+ ++G + F+S+L G +P+ + +T +
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 613
Query: 614 LIQAIVQSNYEKAVALINAM 633
+ + + A L N M
Sbjct: 614 IDGSCKVGDISNAFYLYNEM 633
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 149/393 (37%), Gaps = 71/393 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ GL G +A +L+ + GLK + FVY L++ + G A IF+
Sbjct: 333 MIHGLCQSGEPEKASDLLEEMTTKGLK-----PNAFVYAPLISGYCREGNVSLACEIFDK 387
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + N+ PD+ Y+S+ L +VG ++E K +M+++ L P+
Sbjct: 388 MTK-VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG---------------LLPN 431
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
Y+ +++ + + + + +++ +GLKP+ Y +E +S + V F+
Sbjct: 432 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 491
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
M G + Y +L+ G + A + +E+ G V VY L LC
Sbjct: 492 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTA 551
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 493
+ A +++++ K +PNI N
Sbjct: 552 DREKAFGILDEMS-----------------------------------KKGVDPNIVCYN 576
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A++ ++ S A+ +F L P+ TY+S+++ S
Sbjct: 577 ALIDGLCKSGDISYARNVFNSILAKG-------------LVPNCVTYTSLIDGSCKVGDI 623
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
Y+Y M +G D ++ L S AG
Sbjct: 624 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 656
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 132/322 (40%), Gaps = 24/322 (7%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D L P + NA+L + + ++ V + + +G+ P TY +E + ++D
Sbjct: 75 DRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFD 134
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ +M + G + +TY VL+ G + EA ++ME G+V Y L
Sbjct: 135 TAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 194
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 485
LC + R +A +++++ S KP + + LI M G+ D+ + + M
Sbjct: 195 NGLCKSRRSNEAKALLDEM-SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 253
Query: 486 EPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTFL--------------- 526
+PN T + +++ + +A K++ ++ R ++ Y +
Sbjct: 254 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFR 313
Query: 527 ---SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+ A + P+ YTYS M+ + + E + + M G + + +A L+
Sbjct: 314 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 373
Query: 584 RAGKCHLLEHAFDSLLEAGEIP 605
R G L FD + + +P
Sbjct: 374 REGNVSLACEIFDKMTKVNVLP 395
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 3/210 (1%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ VY+++++ + + F + ++ K G+ P+ Y ++ + +SG
Sbjct: 535 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 594
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F + G +TY L+ + G I+ A M G+ A VY L +
Sbjct: 595 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 654
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIG 490
G + AM ++E++ LR + +F L+ G + + + + M PN
Sbjct: 655 AGDLEQAMFLIEEM-FLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 712
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANS 520
T+ ++ S S+ +F E + S
Sbjct: 713 TIENIISGLSEAGKLSEVHTIFVELQQKTS 742
Score = 39.3 bits (90), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 99/257 (38%), Gaps = 43/257 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A +V + + K + + YT L+ K G A ++N ML
Sbjct: 578 LIDGLCKSGDISYARNVFNSILA---KGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 634
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--------------------RQKPS 295
+ PD Y + G L++ + LIE M R K
Sbjct: 635 AT-GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQ 693
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ +K +H ++ L + N +++ + + V +F +L++ + +A +
Sbjct: 694 ETLKLLHVIMGRGLVPNALTIEN-IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL 752
Query: 356 MEVMLQSGKY--DLVHEFFRKMAKSGE----------------AIGALTYKVLVRAFWEE 397
M+ GK D+V + R K G +G +Y +V +
Sbjct: 753 FMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRK 812
Query: 398 GKINEAVAAVRNMEQRG 414
GK++EA+ ++ M++RG
Sbjct: 813 GKLSEALNLLKEMDKRG 829
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/483 (20%), Positives = 194/483 (40%), Gaps = 40/483 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKG 204
EK ++ LV+ R + ++ + V M GL +FT L+ GL +G
Sbjct: 252 EKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNA---LINGLCKEG 308
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
S+ +A VLD + G+ + + + +L + EA R+FN ML+ + PD+
Sbjct: 309 SYERAKRVLDEMLGVGLCPNAAT---FNPMLVESCRKEDVWEAERVFNEMLQR-GVVPDL 364
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
++ S+ + G L + E+M+ L PD V+Y ++N
Sbjct: 365 ISFSSIVGVFSRNGELGRALAYFEKMKGVG---------------LVPDTVIYTILINGY 409
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ G + ++ + G TY + + + D E F++M + G
Sbjct: 410 CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDF 469
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
T L+ + ++G + +A++ M R + Y L C G + A +
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYD 529
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 503
+ S R P I+F+ LI G + + ++ MK+ +P + T N ++K Y R
Sbjct: 530 MIS-REIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAG 588
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
SKA + T +S +G P PD TY++++ + ++ ++ M
Sbjct: 589 NLSKANDFLN----------TMIS-EGVP--PDCITYNTLINSFVKEENFDRAFFLINNM 635
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
G + + +L SR G+ E +++ G P +T ++ + + N
Sbjct: 636 EERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNM 695
Query: 624 EKA 626
++A
Sbjct: 696 KEA 698
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 168/418 (40%), Gaps = 71/418 (16%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E+ +Y D+ Y+++ + GL+ E L++ M K L+P L
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG---------------LKPGL 294
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE---F 371
YNA++N ++ V ++ GL P+AAT+ ++++S + + V E
Sbjct: 295 FTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN---PMLVESCRKEDVWEAERV 351
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M + G +++ +V F G++ A+A M+ G+V +Y L C
Sbjct: 352 FNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCR 411
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
N A+ + ++ R +T+ L+ G +DD +F+ M + P+
Sbjct: 412 NDDVSGALKMRNEMVE-RGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFY 470
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T+ ++ Y ++ +KA LFE T + LKPD TY+++++
Sbjct: 471 TLTTLIHGYCKDGNMTKALSLFETMTLRS-------------LKPDVVTYNTLMDGFCKV 517
Query: 551 HQWE--------------YFEYVYKGMALSG-CQLDQTKHAW-------------LLVEA 582
+ E + Y+ + ++G C L A+ LV
Sbjct: 518 GEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTC 577
Query: 583 S-------RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ RAG ++++ G P + + ++ + + N+++A LIN M
Sbjct: 578 NTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNM 635
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 122/345 (35%), Gaps = 26/345 (7%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+VV++ ++ V + + + F+ LRK G S + +++ G DL + +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
KSG + T ++V A ++GK++ + ME++GV Y L C G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGT 491
+A +V+ + + KP T+ LI G + + M C PN T
Sbjct: 274 LVSEAFGLVDCMAG-KGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLC-PNAAT 331
Query: 492 VNAMLKVYSR-----------NDM-----------FSKAKELFEETTRANSSGYTFLSGD 529
N ML R N+M FS +F + F
Sbjct: 332 FNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 391
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
G L PD Y+ ++ + M GC +D + LL R
Sbjct: 392 GVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLD 451
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ F ++E G P T ++ N KA++L M
Sbjct: 452 DADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMT 496
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 26/245 (10%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIF 251
+ L+ G G+ +A+S+ + + R LK V Y L+ K G +A ++
Sbjct: 472 LTTLIHGYCKDGNMTKALSLFETM----TLRSLKPDVVTYNTLMDGFCKVGEMEKAKELW 527
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK--------------R 297
M+ ++P ++ + +GL+ E +L + M++K K R
Sbjct: 528 YDMISR-EIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLR 586
Query: 298 IKNMHRKN------WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
N+ + N + PD + YN ++N+ V + F++ + + GL P+ T
Sbjct: 587 AGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVT 646
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + + G+ KM G TY L+ + + + EA M
Sbjct: 647 YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEML 706
Query: 412 QRGVV 416
QRG V
Sbjct: 707 QRGFV 711
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 173/440 (39%), Gaps = 52/440 (11%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVY-TKLLAILGKAGRPHE 246
FT G + L LG +A L + G+ + +Y T + A++ + G
Sbjct: 181 FTFGVAARALCRLG------RARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEA 234
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A + ++L C D+ ++ V + L +G ++E +L++RM MH
Sbjct: 235 ATLLDEMLLMGC--AADVNTFNDVVLGLCGLGHVREAARLVDRMM---------MHG--- 280
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
P +V Y +L + Q + + ++ + + + L GK
Sbjct: 281 ---CTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV----NVVMLNTVIRGCLAEGKLA 333
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
E + M G TY +L+ + G+ AV + ME++G Y L
Sbjct: 334 RATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLL 393
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 485
C NG W DA +++++ + S + + G+I + G +D+ + + Q MK C
Sbjct: 394 HSFCRNGMWDDARAMLDQMSAKGFSMNSQ-GYNGIIYALGKDGKLDEAMRLVQEMKSQGC 452
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYTFLSGDGAPLKPDEYTYS 541
+P+I T N ++ ND +A+ +F EE AN TY+
Sbjct: 453 KPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANG-----------------ITYN 495
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
+++ A + +W+ + M L GC LD + L+ + G + ++
Sbjct: 496 TLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTK 555
Query: 602 GEIPHPLFFTEMLIQAIVQS 621
G P+ F MLI + ++
Sbjct: 556 GIKPNN-FSYNMLINELCKA 574
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 112/277 (40%), Gaps = 17/277 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P YNAVL+ + +++++ + + P+ T+G+A + + G+
Sbjct: 141 VTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDAL 200
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
R MA+ G A+ Y+ ++ A +G + EA + M G + + ++ L
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGL 260
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
C G ++A +V+++ + P +T+ L+ D+ ++ + E N+
Sbjct: 261 CGLGHVREAARLVDRMM-MHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVP---EVNV 316
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+N +++ ++A EL+E + G P PD +TY+ ++
Sbjct: 317 VMLNTVIRGCLAEGKLARATELYE-----------MMGSKGCP--PDVHTYNILMHGLCK 363
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+ + M GC + ++ LL R G
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG 400
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 107/272 (39%), Gaps = 52/272 (19%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ YN +++ + + ++ + G P+ TY + ++G +D
Sbjct: 349 PDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM 408
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M+ G ++ + Y ++ A ++GK++EA+ V+ M+ +G Y + LCN
Sbjct: 409 LDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCN 468
Query: 432 N-----------------------------------GRWQDAMLVVEKIKSLRHSKPLE- 455
N GRWQ+ + + ++ + H PL+
Sbjct: 469 NDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEM--VLHGCPLDV 526
Query: 456 ITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+++ GLI + G++D + + + M +PN + N ++ + A EL +E
Sbjct: 527 VSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 586
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
L PD TY++++
Sbjct: 587 MLNQG-------------LTPDIVTYNTLING 605
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/475 (19%), Positives = 184/475 (38%), Gaps = 50/475 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +L+ L +A +AL ++ ML D + P + A L ++G ++ + L+ M
Sbjct: 148 YNAVLSTLARADCHADALLLYRRMLRD-RVPPTTFTFGVAARALCRLGRARDALALLRGM 206
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ PD V+Y V++A V + ++ G
Sbjct: 207 ARHGCV---------------PDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVN 251
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + + G +M G +TY L+R + +EA A + +
Sbjct: 252 TFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRV 311
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ VV +V + CL G+ A + E + S + P T+ L+ G
Sbjct: 312 PEVNVVMLNTV---IRGCLAE-GKLARATELYEMMGS-KGCPPDVHTYNILMHGLCKLGR 366
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ + M++ C PNI T + +L + RN M+ A+ + ++ + + G++
Sbjct: 367 CGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMS---AKGFSM---- 419
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+ Y+ ++ A + + + + M GC+ D + ++ +
Sbjct: 420 ------NSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMD 473
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMAYAPFHITERQWTEL 648
EH F +LLE G + + + + LI A++ S +++ + L N M + + L
Sbjct: 474 EAEHIFGNLLEEGVVANGITYNT-LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGL 532
Query: 649 F-----ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
E N DR S LE+++ N S + ++ LC++ K RD
Sbjct: 533 IKALCKEGNVDR-SMMLLEEMMTKGIKPNNFSYNMLINE-------LCKAGKVRD 579
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 106/276 (38%), Gaps = 32/276 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
LL G W A ++LD + + + Y ++ LGK G+ EA+R+ M
Sbjct: 392 LLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG---YNGIIYALGKDGKLDEAMRLVQEMK 448
Query: 255 LEDCNLYPDIAAYHSVAVTLGQ-----------VGLLKELV------------KLIERMR 291
+ C PDI Y+++ L LL+E V L+ R
Sbjct: 449 SQGCK--PDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGR 506
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ R+ N + P+ D+V YN ++ A + +++ G+KP+ +
Sbjct: 507 WQEGLRLANEMVLHGCPL---DVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFS 563
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + + + ++GK E ++M G +TY L+ + G + A+ + +
Sbjct: 564 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLP 623
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
V Y L C DA ++++K S
Sbjct: 624 NENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVS 659
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 170/400 (42%), Gaps = 38/400 (9%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
TKL+ IL + G+P EA IFN ++E + P Y ++ L R
Sbjct: 61 TKLMNILVERGKPQEAQFIFNSLVEQGH-RPTTVTYTALVAAL---------------TR 104
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
QK K I + + + ++PD ++ NA++NA S K +F+++ +SG KP+ +T
Sbjct: 105 QKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTST 164
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGE-AIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ ++ K + + M ++ TY +LV A ++ I EA V M
Sbjct: 165 FNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQM 224
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
GV Y LA +G A ++ + + + P E T ++ + G+
Sbjct: 225 LASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLN-KKVNPNERTCGIIVGGYCEQGN 283
Query: 471 IDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTRANSSGYTFL 526
+ + + + M+D PN+ N+++K + +D KA + EE+
Sbjct: 284 LAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESG---------- 333
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+KPD T+S+++ ++A + + + ++ M SG + D + L RAG
Sbjct: 334 ------VKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAG 387
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
+ E + + + G P+ + FT ++ EKA
Sbjct: 388 EPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKA 427
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 146/364 (40%), Gaps = 29/364 (7%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
+ +++ SE + + + M +SG T L+KG G ++M +L+
Sbjct: 130 LNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLEL-- 187
Query: 218 GLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ +LK + Y L+ L K EA + + ML + PD+ Y+++A Q
Sbjct: 188 -MTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLAS-GVQPDVVTYNTLARAYAQ 245
Query: 277 VGLLKELVKLIERMRQK---PSKRIKNMHRKNW-----------------DPVLEPDLVV 316
G + +I M K P++R + + D + P+LV+
Sbjct: 246 DGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVI 305
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+N+++ + GV + +SG+KP T+ M +G+ D E F M
Sbjct: 306 FNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDML 365
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
KSG + +L + F G+ +A + + M + GV ++ + C G+ +
Sbjct: 366 KSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKME 425
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML 496
A V E + + S L+ TF LI + I Q M+ E N+ N+ L
Sbjct: 426 KAWKVFEHMCDMDVSPNLK-TFETLIWGYGEAKQPWRAEEILQMME---EMNVVPENSTL 481
Query: 497 KVYS 500
K+ S
Sbjct: 482 KLVS 485
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 134/324 (41%), Gaps = 25/324 (7%)
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
++F L + G +P+ TY + + + ++ + +M ++G ++ ++ AF
Sbjct: 78 FIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAF 137
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
E G + EA+ + ME+ G T S + L + +++M ++E + + KP
Sbjct: 138 SESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPN 197
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN----------- 502
T+ L+ + I + ++ M +P++ T N + + Y+++
Sbjct: 198 NRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIV 257
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLK-----------PDEYTYSSMLEASATAH 551
DM +K E T GY L+ P+ ++S+++
Sbjct: 258 DMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIG 317
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ + M SG + D + ++ S AG+ + FD +L++G P F+
Sbjct: 318 DSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFS 377
Query: 612 EMLIQAIVQSNYE-KAVALINAMA 634
+L + V++ KA +L+N M+
Sbjct: 378 -ILAKGFVRAGEPVKAESLLNFMS 400
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 33/340 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VYT +++ K G A ++F+ M + PDI Y SV + + G + E ++
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRK-KIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K LEPD V Y A+++ + + K F V Q+ + GL P+
Sbjct: 408 MLVKG---------------LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNV 452
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + ++G+ D+ +E +M++ G TY +V + G I + V +
Sbjct: 453 VTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEE 512
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M+ G Y L C G A ++ +I + +P +TF L+ G
Sbjct: 513 MDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL-RIMLNKRLQPTLVTFNVLMNGFCMSG 571
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS-RNDMFSKAKELFEETTRANSSGYTFLS 527
++D + + M + PN T N+++K Y +N+M RA + Y +
Sbjct: 572 MLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM------------RATTEIYKAMH 619
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
G + PD TY+ +++ A + +++K M G
Sbjct: 620 DRG--VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKG 657
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 159/389 (40%), Gaps = 45/389 (11%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ- 292
+L L + G+ EA + M + N +PD+ +Y V ++G L +++KL++ ++
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGN-FPDVVSYGVVVSGYCRIGELDKVLKLVDELKGK 306
Query: 293 --KPSKRIKN----MHRKNWDPV-------------LEPDLVVYNAVLNACVPSHQWKGV 333
KP + I N + KN + V + PD VVY V++
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+F ++R+ + P TY + + +SGK E F +M G +TY L+
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ + G++ EA + M Q+G+ Y LA LC NG A ++ ++ S + +P
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM-SRKGLQP 485
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
T+ ++ G+I+ + + + M P+ T ++ Y + +KA EL
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545
Query: 513 E--ETTRANSSGYTF--------LSG---DGAPL---------KPDEYTYSSMLEASATA 550
R + TF +SG DG L P+ T++S+++
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ +YK M G D + L+
Sbjct: 606 NNMRATTEIYKAMHDRGVMPDSNTYNILI 634
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 137/345 (39%), Gaps = 24/345 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+V Y V++ + V + +L+ GLKP Y + ++ ++G+ +
Sbjct: 275 PDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQL 334
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
R M K G + Y ++ F + G ++ A M ++ +V Y + +C
Sbjct: 335 LRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICK 394
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
+G+ +A + ++ ++ +P E+T+T LI G + + S+ M + PN+
Sbjct: 395 SGKMVEAREMFNEML-VKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVV 453
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGY-TFLSG----------------- 528
T A+ +N A EL E +R N Y T ++G
Sbjct: 454 TYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM 513
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
D A PD TY+++++A + + + M Q L+ +G
Sbjct: 514 DLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGML 573
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
E + +LE G +P+ F ++ Q +++N + AM
Sbjct: 574 EDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAM 618
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/364 (19%), Positives = 146/364 (40%), Gaps = 28/364 (7%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
VF++ + G+ + + + + + Q GK H +M G ++Y V+V +
Sbjct: 229 VFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYC 288
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--- 452
G++++ + V ++ +G+ +Y + LC NG VVE + LR +
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGE------VVEAEQLLRGMRKWG 342
Query: 453 --PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 509
P + +T +I G++ +F M + P+I T +++ ++ +A+
Sbjct: 343 VFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAR 402
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
E+F E + G L+PDE TY+++++ A + + V+ M G
Sbjct: 403 EMFNE---------MLVKG----LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLT 449
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
+ + L + G+ + + G P+ + ++ N E+ V L
Sbjct: 450 PNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKL 509
Query: 630 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 689
+ M A F+ +T L ++ K +LL + N + +T + L ++
Sbjct: 510 MEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVL---MNG 566
Query: 690 LCRS 693
C S
Sbjct: 567 FCMS 570
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 107/266 (40%), Gaps = 33/266 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF----VYTKLL- 235
M++ GL ++ GL G+ Q + L ++ DL + YT L+
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVK-------LMEEMDLAGFYPDTITYTTLMD 530
Query: 236 --AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+G+ + HE LRI ML L P + ++ + G+L++ +LIE M +K
Sbjct: 531 AYCKMGEMAKAHELLRI---MLNK-RLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEK 586
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ P+ +N+++ + + ++K + G+ P + TY
Sbjct: 587 G---------------IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYN 631
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ ++ ++ ++M + G ++ A TY L+R F++ K EA M +
Sbjct: 632 ILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKH 691
Query: 414 GVVGTASVYYELACCLCNNGRWQDAM 439
G+V +Y G W+ +
Sbjct: 692 GLVAEKDIYDIFVDVNYEEGNWEITL 717
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 178/447 (39%), Gaps = 43/447 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ LL LG+AG +F M D ++ PD+ Y + L + G + + +K+++R
Sbjct: 133 IFNSLLTALGRAGNLRGMTELFTSM-RDASVKPDVVTYGILLNGLCKSGHVGDALKVLDR 191
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRK-SGLKP 347
M S + PD+ + N V++ C + + +V +++R G P
Sbjct: 192 MSSPGSD-------------VCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAP 238
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+A TY + + G + + +M K G A +T ++ G++ A+
Sbjct: 239 NAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFF 298
Query: 408 RNMEQRGV----VGTASVYYELACCL--CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
R E+R V G A Y LA CNN AM + ++ H + FT +
Sbjct: 299 R--EKRTVWPEARGNAVTYSTLASAFLHCNN--VDMAMELFHEMADHGHRPDAVMYFTMI 354
Query: 462 IISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
+ G +D C + K + + N ++ + R +A EL EE
Sbjct: 355 SGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEM------ 408
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
G L+PD YTY+++L A + + + M GCQ L+
Sbjct: 409 -------KGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHG 461
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM--AYAPFH 639
+AGK F S+ EA P+ + + ++ + A+ L + M P +
Sbjct: 462 YCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPAN 521
Query: 640 ITERQWTELFESNEDRISRDKLEKLLN 666
+T + L + +D+ +K +L++
Sbjct: 522 VT--TYNALLKGLQDKKMAEKAFELMD 546
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 163/423 (38%), Gaps = 59/423 (13%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+R+ S AEA L D L+ + + I N LL LG G+ R
Sbjct: 106 RRFSSPAEAAGFLRDSLA----SGAPAPDISIFNS------------LLTALGRAGNLR- 148
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAY 267
+ + ++D Y LL L K+G +AL++ + M ++ PDIA
Sbjct: 149 --GMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAIL 206
Query: 268 HSVAVTLGQVGLLKELVKLI-ERMRQ----KPSKRIKNMHRKNWDPV------------- 309
++V L ++G L++ + + ERMR P+ N + V
Sbjct: 207 NTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARM 266
Query: 310 ----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK--SGLKPSAATYGLAMEVMLQSG 363
+ P+++ N ++ + F++ R + +A TY L
Sbjct: 267 EKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCN 326
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
D+ E F +MA G A+ Y ++ + G++ +A +M++ G A Y
Sbjct: 327 NVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYN 386
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 482
L C + +A ++E++K + +P T+ L+ G + HM
Sbjct: 387 ILIGGFCRKKKLHEAYELLEEMKGV-GLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMID 445
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
D C+P++ T ++ Y + +A +F S D A ++P+ Y++
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALRIFR-------------SMDEARIQPNTVIYNT 492
Query: 543 MLE 545
+++
Sbjct: 493 LID 495
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD Y ++ L Q G L + M++ K D YN ++
Sbjct: 345 PDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKL---------------DAKAYNILI 389
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + + ++++ GL+P TY + + ++G + V E M G
Sbjct: 390 GGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQ 449
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+T+ LV + + GK +EA+ R+M++ + +Y L LC + A+ +
Sbjct: 450 PSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKL 509
Query: 442 VEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 497
++++ + P + T+ L+ D + + M+ + C PN TV+ +++
Sbjct: 510 FDEMR--EKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLME 565
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 131/316 (41%), Gaps = 28/316 (8%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
+ LL L A R EA+ + + + P++ +Y + LK L M
Sbjct: 196 STLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSII---------LKGLCD--NSMS 244
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
Q+ + M ++ P++V YN V++ + +F ++ + G+KP T
Sbjct: 245 QRALDLFQMMAKEGG--ACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVT 302
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y L ++ + ++ D R+M +G +TY ++ + G++ EA R M+
Sbjct: 303 YNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMK 362
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
RG++ + LC +GR ++A + + + + H KP +++ L+ G
Sbjct: 363 SRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGH-KPDIVSYCTLLHGYASEGWF 421
Query: 472 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
D I +F MK + + N ++ Y++ M A +F E + S
Sbjct: 422 ADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVS--------- 472
Query: 531 APLKPDEYTYSSMLEA 546
PD TYS+++ A
Sbjct: 473 ----PDVVTYSTVISA 484
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/427 (19%), Positives = 169/427 (39%), Gaps = 46/427 (10%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
GR EA ++F M + L P+I +S +L + G KE ++ + M K K
Sbjct: 349 GRLKEAAKMFRKM-KSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHK----- 402
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
PD+V Y +L+ + + +F ++ +G+ + + + +
Sbjct: 403 ----------PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK 452
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
G D F +M + G + +TY ++ AF G++ +A+ M RG+ +V
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAV 512
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y+ + C +G A +V ++ + +P + F +I S G + D IF +
Sbjct: 513 YHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLV 572
Query: 482 KDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
D E P++ T +++ Y KA ++ + + ++ D TY
Sbjct: 573 TDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAM-------------EVVGVETDIVTY 619
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
S++L+ + +++ M G + + + +L RAG+ F ++E
Sbjct: 620 STLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679
Query: 601 AGEIPHPLFF---------------TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 645
+G + +L Q + N + ++ ++N M A + + ++
Sbjct: 680 SGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEE 739
Query: 646 T-ELFES 651
ELF +
Sbjct: 740 AKELFAT 746
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 155/396 (39%), Gaps = 88/396 (22%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL---KELV-KL 286
Y+ +++ + GR +A+ FN M+ + P+ A YHS+ G L KELV ++
Sbjct: 478 YSTVISAFSRMGRLTDAMEKFNQMVAR-GIQPNTAVYHSIIQGFCMHGGLVKAKELVSEM 536
Query: 287 IERMRQKPS--------------KRIKNMHRKNWDPVLE----PDLVVYNAVLNACVPSH 328
I + +P R+ + H +D V + PD++ + ++++
Sbjct: 537 INKGIPRPDIVFFNSVINSLCKDGRVMDAH-DIFDLVTDIGERPDVITFTSLIDGYCLVG 595
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ F + + G++ TY ++ ++G+ + FR+M + G +TY
Sbjct: 596 KMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYG 655
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+++ + G+ A M + G T S+Y + LC N +A+++ +K+ +
Sbjct: 656 IMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGT- 714
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKA 508
+ + F+ I+++M +NAM KV + + A
Sbjct: 715 -----MNVKFSITILNTM-------------------------INAMYKVQRKEE----A 740
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
KELF +S G L P+E TY M+ E ++ M SG
Sbjct: 741 KELFAT-----------ISASG--LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSG- 786
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+V SR LL LLE GEI
Sbjct: 787 ----------IVPGSR-----LLNRIIRMLLEKGEI 807
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 101/288 (35%), Gaps = 53/288 (18%)
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV-AAVRN 409
TY + M+ ++ + DL F + ++G I +T L++ + EAV +
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + G V Y + LC+N Q A+
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRAL------------------------------ 248
Query: 470 HIDDCISIFQHMKDH---CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
+FQ M C PN+ N ++ + + KA LF E TR
Sbjct: 249 ------DLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQG------- 295
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+KPD TY+ +++A A + E V + M +G Q D + ++ + G
Sbjct: 296 ------VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLG 349
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ F + G IP+ + L ++A + ++M
Sbjct: 350 RLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +LA L +AGR A + F+ M+E VT+ G++ L
Sbjct: 654 YGIMLAGLFRAGRTVAARKKFHEMIES-----------GTTVTVSIYGII-----LGGLC 697
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R + + +K ++ + + N ++NA + + +F + SGL P+ +
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNES 757
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYG+ + +L+ G + + F M KSG G+ ++R E+G+I +A + +
Sbjct: 758 TYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ + ++ AS + G++ + M
Sbjct: 818 DGKRILLEASTTSLMLSLFSRKGKYHEDM 846
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 153/392 (39%), Gaps = 42/392 (10%)
Query: 226 KSRFVYTKLLAILGKAGRPH---EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
K R L+I GR H +A+R+F+ M D P +Y SV L + LK
Sbjct: 80 KCRITEEIFLSICRGYGRVHMPLDAIRVFHKM-NDFGCKPTDKSYISVFAILVEENQLKV 138
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLR 341
+ + MR+ ++ +V N ++ A C S F +F+++
Sbjct: 139 AMSFYKYMREMGVRQ---------------SVVSLNVLIKALCKNSGTIDAAFEIFREMP 183
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
K G P + TYG + + + GK E F++M G + +TY L+ + G ++
Sbjct: 184 KRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVD 243
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
EA+ M+++ + Y L LC NG +AM ++E + RH KP +T++ L
Sbjct: 244 EAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRH-KPNMVTYSTL 302
Query: 462 IISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
I G + + + MK +P+ G ++ + F +A +E
Sbjct: 303 INGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQI 362
Query: 521 SGYTFLSGDGAPLKPDEYTYS-------SMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
S P+ T+S +++ T +Y GM G +D
Sbjct: 363 S-------------PNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAG 409
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
L+ + G H FD ++ G +P
Sbjct: 410 TFDSLVKCFCKKGDLHKAARIFDEMVLDGCVP 441
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 17/289 (5%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y L L KA + AL +F M E+ + P + Y+ + + G +++ + L+
Sbjct: 141 RISYNMLTYGLCKADQIDRALAVFGEMEENA-VVPSLLTYNGLLYGYCRAGRMEQAMTLL 199
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + +K D V PD+ YN V++ + Q +V +++ KSG P
Sbjct: 200 EEMIEG---------KKGSDVV--PDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSP 248
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ T+ ++ + +GK D + F M + A+TY VL+ +I++A
Sbjct: 249 NVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYF 308
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+M +RGV Y L LC+ + +DA+ +++++ S +P +T+T +I +
Sbjct: 309 VDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSS-TGREPNVVTYTRVIGALCK 367
Query: 468 GGHIDDCISIFQHM----KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
GG I+ +F C+P+ + ++ R F +A E F
Sbjct: 368 GGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYF 416
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 150/385 (38%), Gaps = 22/385 (5%)
Query: 336 VFK-QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
VFK R+ + + TY + +++ G + F M TY +++R
Sbjct: 23 VFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGL 82
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
++ K + A+ +++ME + + T + L CLC NG+ A E K L L
Sbjct: 83 CDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAY---ELYKRLSDECSL 139
Query: 455 E-ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ I++ L ID +++F M+++ P++ T N +L Y R +A L
Sbjct: 140 DRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLL 199
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
EE G+ + PD Y+Y++++ A Q YV + M SGC +
Sbjct: 200 EEMIEGKK---------GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNV 250
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
LL GK F+ ++E P + +T ++ +KA
Sbjct: 251 VTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVD 310
Query: 633 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
M +T L D +K+E L L ++ E V +R + ALC+
Sbjct: 311 MLRRGVEPNVYTYTALIGGLCD---ANKVEDALEILKRMSSTGREPNVVTYTRVIGALCK 367
Query: 693 S---EKERDLSSSAHFGSQAIDISP 714
E+ L + A GS+ P
Sbjct: 368 GGQIERATKLFNDA-MGSRTAKCKP 391
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 185/498 (37%), Gaps = 104/498 (20%)
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
M TE ++ +L+ + S + A V W +D + F Y L L K G +
Sbjct: 1 MATEDDVIHVLENIK---SPKLASRVFKWAARQEDFE--HTVFTYNAYLNALVKGGHGSK 55
Query: 247 ALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM- 301
A +IF+ ML ++C P+I Y V L ++L++ M K P+ I NM
Sbjct: 56 ARKIFDDMLYKEC--LPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNML 113
Query: 302 -----HRKNWDPVLE----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
D E D + YN + + Q VF ++ ++ +
Sbjct: 114 VSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVV 173
Query: 347 PSAATY-GL---------------AMEVMLQSGK-YDLVHEFF----------------- 372
PS TY GL +E M++ K D+V + +
Sbjct: 174 PSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPT 233
Query: 373 -----RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
R+M KSG + +T+ L+ GK++EA A M +R TA Y L
Sbjct: 234 ARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLIT 293
Query: 428 CLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC- 485
R A V+ ++ R +P T+T LI D ++D + I + M
Sbjct: 294 GHARALRIDKANDYFVDMLR--RGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGR 351
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML- 544
EPN+ T ++ + +A +LF + + + A KPD Y YS+++
Sbjct: 352 EPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRT----------AKCKPDSYAYSTIIY 401
Query: 545 ---EASATAHQWEYF-----------EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
S +EYF ++YK MA G +L Q E + + L
Sbjct: 402 WLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMA-DGLELVQ--------ETEKVERVCL 452
Query: 591 LEHAFDSLLEAGEIPHPL 608
A L+ + P PL
Sbjct: 453 EASAHGIELQQKDAPQPL 470
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 19/275 (6%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
+G+P +A+++F L + + + D+A+++++ L + +++ +L +R + S
Sbjct: 137 SGKPDKAVKLF-LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS----- 190
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
D V YN ++N + V K++ G+ P+ TY ++
Sbjct: 191 -----------ADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFF 239
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++G+ EFF +M K I +TY +V F G+I M + GV+ + +
Sbjct: 240 RAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVA 299
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y LC ++A+++ E++ + +P T+ LI G + Q
Sbjct: 300 TYNAFIQVLCKKDSVENAVVMFEEMVR-KGYEPNVTTYNVLIRGLFHAGKFSRGEELMQR 358
Query: 481 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
M++ CEPN T N M++ YS KA LFE+
Sbjct: 359 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 393
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 74/181 (40%), Gaps = 16/181 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y +L +AG+ +A F L ++ N D+ Y +V G G +K
Sbjct: 230 TYNTMLQGFFRAGQIRQAWEFF-LEMKKRNCEIDVVTYTTVVHGFGVAGEIK-------- 280
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
R +N+ + + P + YNA + + +F+++ + G +P+
Sbjct: 281 -------RTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNV 333
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + +GK+ E ++M G TY +++R + E ++ +A+
Sbjct: 334 TTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 393
Query: 410 M 410
M
Sbjct: 394 M 394
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 92/240 (38%), Gaps = 46/240 (19%)
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
++ +++SLR P TF + G D + +F +M +H C ++ + N +L V
Sbjct: 111 LIHRMRSLRIG-PSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 169
Query: 500 SRNDMFSKAKELFEETT---RANSSGYTFLSGDGAPLK------------------PDEY 538
++ KA ELF A++ Y + +K P+
Sbjct: 170 CKSKRVEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLT 229
Query: 539 TYSSMLEASATAHQ----WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
TY++ML+ A Q WE+F + K C++D + ++ AG+ +
Sbjct: 230 TYNTMLQGFFRAGQIRQAWEFFLEMKK----RNCEIDVVTYTTVVHGFGVAGEIKRTRNV 285
Query: 595 FDSLLEAGEIPHPLFFTE---------------MLIQAIVQSNYEKAVALINAMAYAPFH 639
FD ++ G +P + ++ + +V+ YE V N + FH
Sbjct: 286 FDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFH 345
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 114/281 (40%), Gaps = 27/281 (9%)
Query: 131 DVQLGSDYFAKNVEWHPEKRWRSEAEAI--RVLVDRLSEREMTAKNWKFVRIMNQSGLMF 188
DV S K E R R A+ + V+V+ + T K + ++ M G+
Sbjct: 167 DVLCKSKRVEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINP 226
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK-DKRDLKSRFV-YTKLLAILGKAGRPHE 246
+L+G G RQA W + L+ KR+ + V YT ++ G AG
Sbjct: 227 NLTTYNTMLQGFFRAGQIRQA-----WEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKR 281
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
+F+ M+ + + P +A Y++ L + ++ V + E M +K
Sbjct: 282 TRNVFDEMIRE-GVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKG------------ 328
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
EP++ YN ++ + ++ + +++ G +P+ TY + + + + +
Sbjct: 329 ---YEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 385
Query: 367 LVHEFFRKMAKSGEAIGAL-TYKVLVRAFWEEGKINEAVAA 406
F KM +G+ + L TY +L+ + + + V A
Sbjct: 386 KALGLFEKMG-TGDCLPNLDTYNILISGMFVRKRSEDMVVA 425
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 178/417 (42%), Gaps = 41/417 (9%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ I+ + GRP E I + ++E + P + Y ++ L
Sbjct: 70 RTVRSR---TKLMNIMIEKGRPQEVQSILDSIIEGGH-KPSLVTYTTLLAALTIQKHFDS 125
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ +I ++ + +EPD + +NAV+NA S + F ++++
Sbjct: 126 IHSIISQVEENG---------------MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKE 170
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL-TYKVLVRAFWEEGKIN 401
SG KP+ +T+ ++ +G+ + + M++ L TY VLVRA+ + I
Sbjct: 171 SGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIM 230
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+A V M G+ A Y +A NG A ++ ++++ + +P E T +
Sbjct: 231 KAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQN-SNVQPNERTCCII 289
Query: 462 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTR 517
I G I + + MKD +PN+ N+++K + D ++ L EE
Sbjct: 290 IGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFG- 348
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+KPD T+S+++ A + A + ++ M + Q D ++
Sbjct: 349 ---------------VKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSI 393
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L RAG+ E ++++++G P+ + FT ++ E A+ + M
Sbjct: 394 LAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMC 450
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 60/306 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ + G+ ++AM + + +K+ + + L+ G AG P E+ ++ LM
Sbjct: 148 VINAFSESGNMQEAMK---YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMS 204
Query: 256 ED-----------------CN------------------LYPDIAAYHSVAVTLGQVGLL 280
+D CN L PD Y+++A Q G
Sbjct: 205 QDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEA 264
Query: 281 KELVKLIERMRQ---KPSKR------------------IKNMHRKNWDPVLEPDLVVYNA 319
+ +I M+ +P++R ++ ++R D L+P+LVV+N+
Sbjct: 265 SQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMK-DLGLQPNLVVFNS 323
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ + + GV V + + G+KP T+ M +G D E F M K+
Sbjct: 324 LIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKAR 383
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
A Y +L + + G+ +A + M + G ++ + C+ GR + A+
Sbjct: 384 IQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAI 443
Query: 440 LVVEKI 445
+ EK+
Sbjct: 444 KIFEKM 449
>gi|255660978|gb|ACU25658.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 373
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 122/290 (42%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNXMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG ++TY +LV F + G I++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDRAVSVLNGMIKS--GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N MF +A L +E L P TYS ++
Sbjct: 198 TIITYNTLINGLCKNKMFGEAYNLVKELLDKG-------------LDPGVITYSMLMXGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHXVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLXFD 294
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 100/244 (40%), Gaps = 19/244 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K+ ++ Y L+ K G ++L + M
Sbjct: 65 MMRGLFDNGKVDEVISIWEL---MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L V ++ M + K P++
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCK---------------PNVH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N V + +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L+ + + A+ + +G ++ L LC+ G+
Sbjct: 226 LDKGLDPGVITYSMLMXGLCLDHXVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
Query: 436 QDAM 439
Q A+
Sbjct: 286 QLAL 289
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 28/314 (8%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLL 280
+R + F Y LL L R EAL + ++M +D + PD+ +Y +V G
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVIN-----GFF 99
Query: 281 KE--LVKLIERMRQKPSKRIKN------MHRKNWDPVLE-----------PDLVVYNAVL 321
KE L K++++ R P+ N + D +E PD + YN+++
Sbjct: 100 KEGDLDKMLDQ-RISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 158
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S Q K K++R G++P TY M+ + ++G+ + F M K G
Sbjct: 159 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 218
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
TY L++ + +G + E + M + G+ V+ L C + ++AMLV
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 278
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
K++ + P +T+ +I G ++D + F+ M D P+ N+++
Sbjct: 279 FSKMRQ-QGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLC 337
Query: 501 RNDMFSKAKELFEE 514
D + KA+ELF E
Sbjct: 338 IFDKWEKAEELFLE 351
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/484 (19%), Positives = 187/484 (38%), Gaps = 64/484 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
++R ++ L + + K + + M +SG+M ++ G G +
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 168
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ L + + D+ + Y L+ L K GR EA +IF+ M + L PDI Y
Sbjct: 169 EAIVFLKKMRSDGVEPDVVT---YNSLMDYLCKNGRCTEARKIFDSMTKR-GLKPDITTY 224
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ G L E+ L++ M + + P+ V++ ++ A
Sbjct: 225 GTLLQGYATKGALVEMHGLLDLMVRNG---------------IHPNHYVFSILVCAYAKQ 269
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + VF ++R+ GL P+A TYG ++V+ +SG+ + +F +M G ++ Y
Sbjct: 270 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVY 329
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + K +A M RG+ + + + C GR ++ + + +
Sbjct: 330 NSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVR 389
Query: 448 LRHSKPLEITFTGLIISS-MDGGHIDDCISIFQHMKDHCE-------------------- 486
+ KP IT + S+ D + IF +M + +
Sbjct: 390 I-GVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSG 448
Query: 487 -PNIGTVNAMLKVYSRNDMFSKAKELFE----------------------ETTRANSSGY 523
P +GT N +L +N + A +F+ + R + +
Sbjct: 449 GPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 508
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
F++ L P+ +TY M E E + ++ M +GC +D +++ E
Sbjct: 509 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 568
Query: 584 RAGK 587
+ G+
Sbjct: 569 QRGE 572
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 116/304 (38%), Gaps = 22/304 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+V Y+ V+N ++ + P+ TY + + ++ D E
Sbjct: 86 PDVVSYSTVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 138
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
M KSG +TY +V F G+ EA+ ++ M GV Y L LC
Sbjct: 139 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 198
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
NGR +A + + + R KP T+ L+ G + + + M ++ PN
Sbjct: 199 NGRCTEARKIFDSMTK-RGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 257
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ ++ Y++ + +A +F + + L P+ TY ++++ +
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQG-------------LNPNAVTYGTVIDVLCKS 304
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ E ++ M G + D + L+ K E F +L+ G +FF
Sbjct: 305 GRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFF 364
Query: 611 TEML 614
++
Sbjct: 365 NSII 368
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 159/373 (42%), Gaps = 72/373 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT+L+ LGKAGR EA + ML D L PD+ +++ LG+VG ++EL +
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFS 362
Query: 289 RM---RQKPSKRIKNMHRK-------------NWDPVLEPDLV-----VYNAVLNACVPS 327
M R P+ N K +W ++ D V Y+ +++ +
Sbjct: 363 EMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT 422
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + + +++ + G P A Y + + ++ +Y+ +E F+++ ++ + + Y
Sbjct: 423 NRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVY 482
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
V+++ F + GK++EAV M+ +G
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQG--------------------------------- 509
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
S P + L+ + G I++ S+ + M+++ C +I + N +L ++R +
Sbjct: 510 ---SGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+A E+FE + +KPD TY+++L A A +E + + M
Sbjct: 567 RAIEMFETIKHSG-------------IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Query: 567 GCQLDQTKHAWLL 579
G + D ++ +L
Sbjct: 614 GFEYDAITYSSIL 626
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/567 (16%), Positives = 226/567 (39%), Gaps = 83/567 (14%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSG 185
+D ++ + +F +W ++R ++ + L+ L E + + ++ ++ ++ +
Sbjct: 102 IDVEINVKIQFF----KWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTY 157
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
+ + + +L+K LG +A+SV Y K ++ + Y ++ +L + G+
Sbjct: 158 VSVSPAVLSELVKALGRAKMVSKALSVF---YQAKGRKCKPTSSTYNSVILMLMQEGQHE 214
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+ ++ M + + +PD Y ++ + ++G ++L + M+
Sbjct: 215 KVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK-------------- 260
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
D ++P +Y +L + + +F++++++G P+ TY ++ + ++G+
Sbjct: 261 -DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 366 DLVHEFFRKMAKSG------------EAIG-----------------------ALTYKVL 390
D + F++ M + G +G ++Y +
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTV 379
Query: 391 VRAFWE-EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
++A +E + ++E + M+ V + Y L C R + A+L++E++ +
Sbjct: 380 IKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE-K 438
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-----MLKVYSRNDM 504
P + LI + + +F+ +K+ N G V++ M+K + +
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKE----NFGNVSSRVYAVMIKHFGKCGK 494
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
S+A +LF E S PD Y Y++++ A + + M
Sbjct: 495 LSEAVDLFNEMKNQGSG-------------PDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 624
+GC+ D H +L +R G F+++ +G P + + +L +E
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 625 KAVALINAMAYAPFHITERQWTELFES 651
+A ++ M F ++ + ++
Sbjct: 602 EAARMMREMKDKGFEYDAITYSSILDA 628
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 115/556 (20%), Positives = 219/556 (39%), Gaps = 67/556 (12%)
Query: 131 DVQLGSDYFAKNVE-WHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFT 189
D +LG F +++ WH R R+ + I + +L + WK ++ + S + +
Sbjct: 73 DTRLGFRLFIWSLKSWH--LRCRTVQDLI---IGKLIKENAFELYWKVLQELKNSAIKIS 127
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
L++ + G +A+ + K DL F + +L L + AL
Sbjct: 128 SEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDL---FAFNLILHFLVRKEAFLLALA 184
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM----- 301
++N ML+ CNL PD+ Y + L + ++ + L + M + P++ I ++
Sbjct: 185 VYNQMLK-CNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGL 243
Query: 302 --HRKNWDPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+K +D DL+ YN +LN S F + + L K G
Sbjct: 244 CQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGV 303
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
YG + + ++ +Y+ H +++KM + + Y +++R +EG++ EA+ +
Sbjct: 304 IGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGE 363
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M +RG+ Y L C+ G +A + +I S P T++ LI G
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI-SKHDCFPNNHTYSILICGMCKNG 422
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE--ETTRANSSGYTFL 526
I+ IF+ M K C P++ T N+++ + + +A+ LF E R S
Sbjct: 423 LINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLS 482
Query: 527 SG-------------------DGAPLK--------------PDEYTYSSMLEASATAHQW 553
G G LK PD TY+ ++
Sbjct: 483 QGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNI 542
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
++K M L G D + L+ RAG+ F+ +++ G +P + +
Sbjct: 543 NGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTI 602
Query: 614 LIQAIVQSNYEKAVAL 629
+ + ++N A+++
Sbjct: 603 MTWSCRENNISLALSV 618
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 151/342 (44%), Gaps = 41/342 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F YT+L+ LGKAGR EA F + E C PD +++ LG+ G L + +KL
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFFYEMQREGCR--PDTVVMNNMINFLGKAGRLDDAMKLF 358
Query: 288 ERM---RQKPSKRIKNMHRK-------------NW-----DPVLEPDLVVYNAVLNACVP 326
+ M R PS N K +W + + P Y+ +++
Sbjct: 359 QEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCK 418
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+++ + + +++ + G P A Y ++ + ++ +YDL E F+++ ++ + A
Sbjct: 419 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 478
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y V+++ + G++++A+ M + G Y L L G +A+ + +++
Sbjct: 479 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 538
Query: 447 SLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 504
H +I +I++ + G + + +MK P++ + N +L S M
Sbjct: 539 E--HGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGM 596
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
F +A +L EE N+ G+ + D TYSS+LEA
Sbjct: 597 FEEAAKLMEEM---NTLGFEY----------DLITYSSILEA 625
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/545 (17%), Positives = 222/545 (40%), Gaps = 47/545 (8%)
Query: 134 LGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL-MFTEG 191
+G + + W ++R + + L+ L E + WK ++ M ++ + + T
Sbjct: 101 IGVNVKMQFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPT 160
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAIL---GKAGRPHEAL 248
++ ++++ LG+ +A+++ Y +K ++ + Y ++ +L G+ G+ HE
Sbjct: 161 ELSEVVRMLGNAKMVSKAIAIF---YQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHE-- 215
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKN 305
++N M + + +PD Y ++ ++G +L+ M++ +P+ +I M
Sbjct: 216 -LYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITL 274
Query: 306 W---DPV--------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+ D V PD+ Y ++ + + + F ++++ G +P
Sbjct: 275 FFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPD 334
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVAAV 407
+ + ++G+ D + F++M +TY +++A +E + + +E +
Sbjct: 335 TVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWF 394
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M++ G+ ++ Y L C R + AM+++E++ + P + LI +
Sbjct: 395 ERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE-KGFPPCPAAYCSLIDALGK 453
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
D +FQ +K++C + V A M+K + A +F+E + +
Sbjct: 454 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCA----- 508
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
PD Y Y++++ A + + M GC D + +L ++ G
Sbjct: 509 --------PDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTG 560
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
H ++ ++ P + + +L +E+A L+ M F ++
Sbjct: 561 GPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYS 620
Query: 647 ELFES 651
+ E+
Sbjct: 621 SILEA 625
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 29/232 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE---L 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ LGKAGR +A+ +F+ M PD+ AY+++ L + G+
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM-NKLGCAPDVYAYNALMSGLARTGM 526
Query: 280 LKELVKLIERMRQ-------KPSKRIKNMHRKNWDP-------------VLEPDLVVYNA 319
L E + + RM++ I N K P + PD+V YN
Sbjct: 527 LDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNT 586
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
VL A + ++ + +++ G + TY +E + GK D HE+
Sbjct: 587 VLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAI---GKVD--HEY 633
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 159/372 (42%), Gaps = 33/372 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL--I 287
V+ ++ + ++GR +A ++ + M D + PD+ +++++ + G L V L +
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTM-HDRGIDPDLVSFNTLINARSKSGCLAAGVALDLL 281
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD++ YN +++AC S + VF+ + S +P
Sbjct: 282 FEVRQSG---------------LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRP 326
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + V + GK + FR++ + G A+TY L+ AF +EG +++
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTC 386
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ + G Y + GR A+ + ++++++ P +T+T +I S
Sbjct: 387 EQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAM-GCTPDAVTYTVMIDSLGK 445
Query: 468 GGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
I + + + M D +P + +A++ Y++ + A+ F+ +SG
Sbjct: 446 MNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMI---ASG---- 498
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+KPD Y ML+ A + E +Y+ M + D + LLV ++
Sbjct: 499 ------VKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKED 552
Query: 587 KCHLLEHAFDSL 598
KC +E +
Sbjct: 553 KCEEIEEVIQDM 564
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/427 (18%), Positives = 178/427 (41%), Gaps = 33/427 (7%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S+ +Y +++ K G P A R+ + L+ ++ + G++ L ++ L
Sbjct: 709 SKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEIL 768
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++ +RQ + R+ W NA+++A S ++ VF + K+G
Sbjct: 769 VKGLRQA-----SGIDRRIW-----------NALIHAYAESGLYEKARAVFDNMIKTGPL 812
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ + M ++ G+ D ++ ++ I T +L+ AF + G + E +
Sbjct: 813 PTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKI 872
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M+ G + +Y + LC++ R++D L++ +++ L I L+
Sbjct: 873 YNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAI-LNALLNMYT 931
Query: 467 DGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G+ D +++ ++ EP+ T N ++ +Y R+ + +E G+T
Sbjct: 932 AAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRS---FRPEE-----------GFTL 977
Query: 526 LSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
L+ G L P +Y S+L ASA A E + +++ M QL+++ + ++
Sbjct: 978 LNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRN 1037
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
AG E+ + E G P ++ +A ++N + + ++
Sbjct: 1038 AGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLP 1097
Query: 645 WTELFES 651
++ +F++
Sbjct: 1098 YSTVFDA 1104
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 107/278 (38%), Gaps = 52/278 (18%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
LR +G + + M V +SG++D + M G +++ L+ A + G
Sbjct: 212 LRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGC 271
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEIT 457
+ VA ++ + +R S +P IT
Sbjct: 272 LAAGVA------------------------------------LDLLFEVRQSGLRPDVIT 295
Query: 458 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+ LI + +++D +++F+ M C P++ T NAM+ V+ R +A+ LF E
Sbjct: 296 YNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELV 355
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
PD TY+S+L A A + E+ + + +G + ++ +
Sbjct: 356 EKG-------------FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYN 402
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ + G+ L +D + G P + +T M+
Sbjct: 403 TMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMI 440
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 151/367 (41%), Gaps = 39/367 (10%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R+ + L K G+ EA F+L+ E + PD Y+ + L + L +E + ++
Sbjct: 246 RYTLSCFAYSLCKGGKCREA---FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDIL 302
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
RMR P++V Y +L+ C+ Q + + G P
Sbjct: 303 HRMRSSSCI---------------PNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYP 347
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW--EEGKINEAV- 404
+ + + +S Y ++ F+KM K G G L Y + + + EE ++ +
Sbjct: 348 NREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILD 407
Query: 405 ---AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
A M GVV A CLC G++ A ++ ++ + P + T++ +
Sbjct: 408 LVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMG-KGFVPDDSTYSKV 466
Query: 462 IISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
I D ++ S+F+ MK + P++ T ++ + + + +A++ F+E
Sbjct: 467 IGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGC 526
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
+ P+ TY++++ A A Q + +++ M L GC+ + + L+
Sbjct: 527 T-------------PNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALID 573
Query: 581 EASRAGK 587
+AG+
Sbjct: 574 GHCKAGQ 580
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 128/288 (44%), Gaps = 6/288 (2%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT L+ KA + A +F +ML E C P++ Y ++ + G +++ ++
Sbjct: 532 TYTALIHAYLKAKQMPVADELFEMMLLEGCK--PNVVTYTALIDGHCKAGQIEKACQIYA 589
Query: 289 RMRQK-PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
RMR S + + + + P+++ Y A+++ +++ K + + G +P
Sbjct: 590 RMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEP 649
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ Y ++ + GK E F KM++ G + TY + +++ +++ + +
Sbjct: 650 NQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVL 709
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M + +Y E+ LC G+ +A ++ K++ + P +T+T +I
Sbjct: 710 SKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEE-KGCNPNVVTYTAMIDGFGK 768
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G I+ C+ +F+ M C PN T ++ N + +A +L +E
Sbjct: 769 SGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 142/354 (40%), Gaps = 38/354 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y+ V+ + + + F +F++++++G+ PS TY + ++ ++G ++
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M G +TY L+ A+ + ++ A M G Y L C
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577
Query: 432 NGRWQDAMLVVEKIKS------------LRHSK---PLEITFTGLIISSMDGGHIDDCIS 476
G+ + A + +++ L H+ P IT+ L+ + +
Sbjct: 578 AGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHE 637
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ M H CEPN +A++ + + A+E+F T+ + GY+ P
Sbjct: 638 LLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVF---TKMSERGYS----------P 684
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
+ YTYSS ++ ++ + V M + C + + ++ + GK + A+
Sbjct: 685 NLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGK---TDEAY 741
Query: 596 DSLL---EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA---YAPFHITER 643
+L E G P+ + +T M+ E+ + L M AP IT R
Sbjct: 742 KLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYR 795
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 140/348 (40%), Gaps = 30/348 (8%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N ++ C + W +L+ G KPS TY ++V L++ K D + R+M
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+ T + + GK EA + E V Y + LC +++
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLID--EAEDFVPDTVFYNRMVSGLCEASLFEE 297
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
AM ++ +++S P +T+ L+ + G + C I M + C PN N+++
Sbjct: 298 AMDILHRMRS-SSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLI 356
Query: 497 KVYSRNDMFSKAKELFEETTRANSS-GYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWE 554
Y ++ +S A +LF++ + GY + G+ +E S +L+ A
Sbjct: 357 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKA---- 412
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK-----CHLLEHAF---DS--------L 598
Y E + G+ L+ +++ + A L A + + C ++ F DS L
Sbjct: 413 YSEMLDLGVVLN--KVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFL 470
Query: 599 LEAGEIPHPL-FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 645
+A ++ F EM IV S Y + LI++ A R+W
Sbjct: 471 CDASKVEKAFSLFEEMKRNGIVPSVYTYTI-LIDSFCKAGLIQQARKW 517
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 29/247 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y L+ L KA R EA + + ML P+ Y +V ++G L++ ++
Sbjct: 617 ITYGALVDGLCKANRVKEAHELLDTMLAH-GCEPNQIVYDAVIDGFCKIGKLQDAQEVFT 675
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M ++ P+L Y++ ++ ++ V V ++ ++ P+
Sbjct: 676 KMSERG---------------YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPN 720
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
Y ++ + + GK D ++ KM + G +TY ++ F + GKI + + R
Sbjct: 721 VVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFR 780
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS-------LRHSKPLE------ 455
+M +G Y L C+NG +A +++++K L H K +E
Sbjct: 781 DMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEF 840
Query: 456 ITFTGLI 462
IT GL+
Sbjct: 841 ITSIGLL 847
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 176/455 (38%), Gaps = 49/455 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ + GR EA+ +F M + PD+ Y ++ L + G +E + ++ RM
Sbjct: 84 YAALIEGFCETGRIDEAVELFGEMDQ-----PDMHMYAALVKGLCKAGRGEEGLLMLRRM 138
Query: 291 RQ---KPSKRI-----------------KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
++ +PS R + M ++ ++ L P +V AV+NA +
Sbjct: 139 KELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRM 198
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
V + ++ G KP+ TY ++ GK KM G A+TY +L
Sbjct: 199 SDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLL 258
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+R +G I A +R ME G++ Y L LC +GR A + + +++ R
Sbjct: 259 IRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET-RG 317
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML----KVYSRNDMF 505
KP +TF LI G +D + M C P+ T ++ + K+ +
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377
Query: 506 SKAKELFEETTRANSSGYTFLS----------------GD--GAPLKPDEYTYSSMLEAS 547
S E+ ++ + ++ YT + G+ + PD TY++ + A
Sbjct: 378 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 437
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ E V M+ +G +D + L+ + G+ + +P+
Sbjct: 438 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 497
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE 642
+ +L + E + L A + +T+
Sbjct: 498 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTD 532
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 131/341 (38%), Gaps = 53/341 (15%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YNAV+ + + +SG +P A T+ + ++ + D+ + F KM
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G A ++Y L+ F E G+I+EAV M+Q + +Y L LC GR +
Sbjct: 74 LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDM----HMYAALVKGLCKAGRGE 129
Query: 437 DAMLVVEKIKSL-------------------RHSK---------------PLEITFTGLI 462
+ +L++ ++K L R +K P +T T +I
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189
Query: 463 ISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
+ G + D + + + MK C+PN+ T NA+++ + KA L +
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG-- 247
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
+ PD TY+ ++ E + + M G DQ + L+
Sbjct: 248 -----------VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 296
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ G+ FDSL G P+ + F LI + +S
Sbjct: 297 LCKDGRTDQACSLFDSLETRGIKPNAVTFNS-LINGLCKSG 336
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 168/406 (41%), Gaps = 55/406 (13%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ ++ Y L+ L K GR +A +F+ LE + P+ ++S+ L + G +
Sbjct: 284 IADQYTYNALINALCKDGRTDQACSLFD-SLETRGIKPNAVTFNSLINGLCKSGKVDIAW 342
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL-NACVPSHQWKGVFWVFKQLRKS 343
K +E+M PD Y++ + + C +G+ ++ + L+K
Sbjct: 343 KFLEKMVSAGCT---------------PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 387
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
+KPS Y + + +L+ Y LV + +M SG +TY +RA+ EG++NEA
Sbjct: 388 -VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 446
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ M + GV Y L + G+ A+ +++++ S+ S P + T+ L+
Sbjct: 447 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV-ASVPNQFTYFILLR 505
Query: 464 SSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ ++D + + T + K D+F + + NS Y
Sbjct: 506 HLVRMRLVEDVLPL-------------TPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 552
Query: 524 T-FLSGDGAPLKPDEYT--YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
+ L G + +E T S M E S + + E +Y + C+ + AW+LV
Sbjct: 553 SSILEGFSEDGRTEEATSLVSLMKEDSISLN-----EDIYTALVTCFCKSKRYLDAWVLV 607
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
C +++H G IPH + + +L I + +KA
Sbjct: 608 -------CSMIQH--------GFIPHLMSYQHLLSGLICEGQTDKA 638
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 130/382 (34%), Gaps = 85/382 (22%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTK 233
++ +R+M GL+ + L+ L G QA S+ D + + R +K V +
Sbjct: 272 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL----ETRGIKPNAVTFNS 327
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ L K+G+ A + M+ PD Y S L ++ +E + I M QK
Sbjct: 328 LINGLCKSGKVDIAWKFLEKMVS-AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 386
Query: 294 ---PS-------------KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQWKGV 333
PS +R + + W ++ PD+V Y + A +
Sbjct: 387 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 446
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR- 392
V ++ K+G+ Y M+ G+ D ++M TY +L+R
Sbjct: 447 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRH 506
Query: 393 ---------------------------------------------------AFWEEGKIN 401
F E+G+
Sbjct: 507 LVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTE 566
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKS--LRHSKPLEITF 458
EA + V M++ + +Y L C C + R+ DA +LV I+ + H +
Sbjct: 567 EATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLL 626
Query: 459 TGLIISSMDGGHIDDCISIFQH 480
+GLI G D IF +
Sbjct: 627 SGLICE----GQTDKAKEIFMN 644
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 175/434 (40%), Gaps = 51/434 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL----------GQVG 278
+ Y L+ L GR +AL + + M P YH VTL G VG
Sbjct: 112 YTYFPLVRALCARGRIADALAVLDDMARR-GCAPTPPMYH---VTLEAACRASGFRGAVG 167
Query: 279 LLKEL-------------VKLIERMRQKPSKRIKNMHRKNWDPV-LEPDLVVYNAVLNAC 324
+L++L + L Q P + R EPD+V YNAVL
Sbjct: 168 VLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGL 227
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ +W V + +++ +G P+ T+ + + ++G ++ VHE +MA+ G A
Sbjct: 228 CMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDV 287
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
Y ++ +E ++ A + M G+ Y L LC+ RW++A ++ +
Sbjct: 288 RMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAE 347
Query: 445 IKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 502
+ PL ++TF L+ G +D I + + M +H C P++ T ++ + +
Sbjct: 348 M--FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKE 405
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+ +A L +P+ +Y+ +L+ +A +W E +
Sbjct: 406 GLIDEAVMLLRSMAACGC-------------RPNTVSYTIVLKGLCSAERWVDAEELMSQ 452
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLFFTEMLIQAIV 619
M GC + L+ + G L+E A + L L G P + ++ ++
Sbjct: 453 MIQQGCPPNPVTFNTLINFLCKKG---LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 509
Query: 620 QSNYEKAVALINAM 633
N ++A+ L+N M
Sbjct: 510 AGNTDEALELLNVM 523
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P++V YN +L + +W+ + ++ T+ + ++ + Q+G D V
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVI 377
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E +M + G +TY ++ F +EG I+EAV +R+M G Y + L
Sbjct: 378 EVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGL 437
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C+ RW DA ++ ++ + P +TF LI G ++ I + + M + C P+
Sbjct: 438 CSAERWVDAEELMSQMIQ-QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 496
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF--------LSGDG---------- 530
+ + + ++ + +A EL + S T LSG+G
Sbjct: 497 LISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFE 556
Query: 531 ----APLKPDEYTY----SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++ D Y SS+ + T E+ Y M SGC +++ + L+
Sbjct: 557 NIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAY----MVSSGCVPNESTYTILI 609
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 122/312 (39%), Gaps = 33/312 (10%)
Query: 116 LKEMFEKDLNWVLDDDVQLG--SDYFAKN---------VEWHPEKRWRSEAEAIRVLVDR 164
L EMF+KD DDV D+ +N +E E + +++
Sbjct: 345 LAEMFDKDCPL---DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVING 401
Query: 165 LSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD 224
+ + + +R M G +LKGL W A ++ + +
Sbjct: 402 FCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQ---MIQQGC 458
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ + L+ L K G +A+ + ML + PD+ +Y +V LG+ G E +
Sbjct: 459 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTVIDGLGKAGNTDEAL 517
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L+ M +K + P+ ++Y+++ +A + V +F+ ++ +
Sbjct: 518 ELLNVMVKKG---------------MSPNTIIYSSIASALSGEGRINKVIQMFENIQDTT 562
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
++ A Y + + + G+ D EF M SG TY +L+R EG + EA
Sbjct: 563 VRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 622
Query: 405 AAVRNMEQRGVV 416
+ + +G +
Sbjct: 623 EILTELCSKGAL 634
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 18/256 (7%)
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
A A TY LVRA G+I +A+A + +M +RG T +Y+ C ++ A+
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH--CEPNIGTVNAMLK 497
V+ + L++ L++ ++ D G +D+ + + + + CEP++ + NA+L+
Sbjct: 168 VLRDLHG--RGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLR 225
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
+ ++L EE A G P P+ T+S+++ +E
Sbjct: 226 GLCMARRWGHVQDLMEEMVAA-----------GCP--PNIVTFSTLIGHLCRNGLFERVH 272
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
V+ MA GC D +A ++ + + + + + G P+ + + +L
Sbjct: 273 EVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGL 332
Query: 618 IVQSNYEKAVALINAM 633
+E+A L+ M
Sbjct: 333 CSADRWEEAEGLLAEM 348
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 91/248 (36%), Gaps = 17/248 (6%)
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y +V + G++ A ++ V A Y+ L LC GR DA+ V++ +
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 505
R P + + ++ + + + + C ++G N +L+
Sbjct: 139 R-RGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPV 197
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
+A L + L G +PD +Y+++L A +W + + + + M
Sbjct: 198 DEAVRLLRD----------LLPSFGC--EPDVVSYNAVLRGLCMARRWGHVQDLMEEMVA 245
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
+GC + + L+ R G + + E G P + ++ + E
Sbjct: 246 AGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEV 305
Query: 626 AVALINAM 633
A ++N M
Sbjct: 306 ARGILNRM 313
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/441 (19%), Positives = 180/441 (40%), Gaps = 56/441 (12%)
Query: 143 VEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGD 202
V W + + EA A L+++++ T + ++N M + + LL+ + D
Sbjct: 266 VNWLAKNKKIQEAVA---LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 322
Query: 203 KGSWRQAMSVLDWVYGL-KDKR---------DLKSR------FVYTKLLAILGKAGRPHE 246
G ++ + GL K+KR ++ SR YT L+ L + G+ +
Sbjct: 323 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQ 382
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A ++ M PD+ ++ L + G + V++ + M +
Sbjct: 383 ASSVYKTMTSH-GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG------------ 429
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
L P+ VVY+A+++ + + + Q++K+ P TY + ++ + +SG +
Sbjct: 430 ---LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 486
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
FF +M ++G TY +L+ + G + A + +M + VY L
Sbjct: 487 AARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLV 541
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 486
LC +G+ + ++ +++ R T T LI +D+ +S+F ++
Sbjct: 542 DGLCKSGKLEGGCMLFHEME--RSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 599
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+ N+++ ++ ++ + +++E TR KPD TY+++L
Sbjct: 600 PHPYAYNSIISALIKSGKVNEGQAVYQEMTRW--------------WKPDRVTYNALLNG 645
Query: 547 SATAHQWEYFEYVYKGMALSG 567
A++ + Y Y M G
Sbjct: 646 MIGANRMDRAHYYYLEMTGRG 666
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 174/428 (40%), Gaps = 42/428 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G QA S+ D+ + YT ++ L K + EA+ + +
Sbjct: 230 LINGLVKAGMMIQAHSLAQETTTNGCTIDIHT---YTAIVNWLAKNKKIQEAVALMEKIT 286
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P IA Y+++ L ++G L+E + L+ RK D PD+V
Sbjct: 287 AN-GCTPTIATYNALLNGLCKMGRLEEAIDLL---------------RKIVDNGCTPDVV 330
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++++ + + +FK++ GL Y + +LQ+GK ++ M
Sbjct: 331 TYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTM 390
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +T ++ + G+I AV ++ME RG+ VY L LC +
Sbjct: 391 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 450
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
A+ ++ ++K P IT+ LI G ++ + F M + C+P++ T N
Sbjct: 451 DCALEMLAQMKK-AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 509
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + A + ++ + + YSS+++ + + E
Sbjct: 510 LISGLCKAGNTDAACGVLDD------------------MSSSRFVYSSLVDGLCKSGKLE 551
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ M SG QT+ L+ +A + F+++ + G +PHP + +
Sbjct: 552 GGCMLFHEMERSGVANSQTR-TRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNS-I 608
Query: 615 IQAIVQSN 622
I A+++S
Sbjct: 609 ISALIKSG 616
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 151/365 (41%), Gaps = 51/365 (13%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P L +N VL+ S + F+ +R+S + SAAT+ + + ++++G H
Sbjct: 186 VAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS-MPVSAATFSILINGLVKAGMMIQAH 244
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
++ +G I TY +V + KI EAVA + + G T + Y L L
Sbjct: 245 SLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGL 304
Query: 430 CNNGRWQDAMLVVEKI-----------------------KSLRHSKPLE----------- 455
C GR ++A+ ++ KI +S K +
Sbjct: 305 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDT 364
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+ +T LI + G I S+++ M H C P++ T++ M+ D SKA
Sbjct: 365 VCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI------DGLSKAG----- 413
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
R ++ F S + L P+E YS+++ A + + + M + C D
Sbjct: 414 --RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 471
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS-NYEKAVALINAM 633
+ L+ ++G FD +LEAG P ++ +LI + ++ N + A +++ M
Sbjct: 472 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPD-VYTYNILISGLCKAGNTDAACGVLDDM 530
Query: 634 AYAPF 638
+ + F
Sbjct: 531 SSSRF 535
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 185/447 (41%), Gaps = 41/447 (9%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
ALR+ + + L PD Y +V L G + + V L+ H
Sbjct: 297 ALRVVHRSIPAWKLVPDKFTYSTVVSALADAGRVDDAVALV--------------HEMVV 342
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D V+ + +N VL A + + G +F ++ G PSAATY + + +L G+
Sbjct: 343 DGVVAAE--AFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAK 400
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
R+M ++ G +TY +V G++ +A + M +G+V V+ +
Sbjct: 401 AAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVI 460
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
C G A V + + + KP + ++ +I G + + +F+ M + C
Sbjct: 461 TGFCKLGEVDRASRVWDTMVA-AGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKC 519
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PNI T ++M++ Y + S+A +E+ R + P+ TYS ++
Sbjct: 520 VPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCT-------------PNAVTYSVLIN 566
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+ + V+K M GC D + ++ +G F +L G+
Sbjct: 567 GLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDT- 625
Query: 606 HP-LFFTEMLIQAIVQS-NYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDK 660
HP + +L+ ++++ + +A+ L+N M A P +T + E + ++
Sbjct: 626 HPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREIEVGQK--GQEF 683
Query: 661 LEKLLNALCN--CNAASSEITVSNLSR 685
LE L+ LCN N A+ E+ + L++
Sbjct: 684 LEGLVVRLCNRKRNKAAGEVLMVMLAK 710
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 19/286 (6%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL L GR A+ + M E + P + Y +V L + G L++ K+IE M
Sbjct: 386 YNVLLHGLLLCGRAKAAMGVMRRM-ERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEM 444
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R K L P+ V++ V+ + V+ + +G+KP+
Sbjct: 445 RSK---------------GLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVV 489
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y ++ + + GK FR+M ++ +TY +VR +++ G ++A++ +M
Sbjct: 490 LYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDM 549
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ G A Y L LCN GR +DAM+V + + R P I +T +I G
Sbjct: 550 LRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLG-RGCVPDTIAYTSMIKGFCVSGM 608
Query: 471 IDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+D + +F M + P++ N +L R +A +L +
Sbjct: 609 VDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQ 654
>gi|255660980|gb|ACU25659.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 376
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 122/290 (42%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + G S +++ + M + +GK V
Sbjct: 21 VSPDAVVYNAMLNGYFRXXKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVXEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M SG ++TY +LV F G I++++ + EQ+G V A Y + L
Sbjct: 80 XIWELMKXSGFVEDSITYGILVHGFCXNGYIDKSLHVLEMAEQKGGVLXAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLBRAVSVLNGMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMXTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGXAYNLVKELLDKG-------------LNPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 111/282 (39%), Gaps = 21/282 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LV K+ + + Q G + ++ GL + + +A+SVL+ G+
Sbjct: 99 ILVHGFCXNGYIDKSLHVLEMAEQKGGVLXAFAYSAMINGLCKEANLBRAVSVLN---GM 155
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVG 278
+ VY L+ L A + +A+R+F M C+ P I Y+++ L +
Sbjct: 156 IKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMXTMHCS--PTIITYNTLINGLCKNE 213
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ L++ + K L P ++ Y+ ++ H+ + ++
Sbjct: 214 MFGXAYNLVKELLDKG---------------LNPGVITYSMLMKGLCLDHKVEKALQLWN 258
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
Q+ G KP + + + + GK L + M + A +++ L+ F+++G
Sbjct: 259 QVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDG 318
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
I A+ + + G+ Y LC+ R DA+L
Sbjct: 319 DIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P+ VYN ++N V + +++ VF+++ P+ TY + + ++ + +
Sbjct: 161 KPNAHVYNTLINGLVGASKFEDAIRVFREMXTMHCSPTIITYNTLINGLCKNEMFGXAYN 220
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+++ G G +TY +L++ + K+ +A+ + +G ++ L LC
Sbjct: 221 LVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLC 280
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNI 489
+ G+ Q A+ + + + P ++ L+ G I + + I+ +++ EP+I
Sbjct: 281 SVGKMQLALSLYFDMNRWK-CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDI 339
Query: 490 GTVNAMLK 497
+ N LK
Sbjct: 340 ISYNITLK 347
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 153/431 (35%), Gaps = 102/431 (23%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K G+ EAL ++E N PD Y + L + L +E + + RMR
Sbjct: 280 LCKVGKWREALT----LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL- 334
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
P++V Y+ +L C+ Q V + G PS + +
Sbjct: 335 --------------PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV-------------------------- 391
SG + ++ +KM K G G + Y +L+
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 392 ---------------RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
R GK +A + +R M +G + S Y ++ LCN + +
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 437 DAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
A L+ E++K R ++ T+T ++ S G I+ F M++ C PN+ T A
Sbjct: 501 LAFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 495 MLKVYSRNDMFSKAKELFE----ETTRANSSGYT-------------------------- 524
++ Y + S A ELFE E N Y+
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 525 --------FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
F D +P+ TY ++L+ +H+ E + M++ GC+ +Q +
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 577 WLLVEASRAGK 587
L+ + GK
Sbjct: 679 ALIDGLCKVGK 689
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/351 (19%), Positives = 138/351 (39%), Gaps = 32/351 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y+ VLN + + + F +F+++++ GL TY + ++ ++G + ++
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M + G +TY L+ A+ + K++ A M G + Y L C
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 432 NGRWQDAMLVVEKIKSLR---------------HSKPLEITFTGLIISSMDGGHIDDCIS 476
G+ + A + E++ + +P +T+ L+ +++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 477 IFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ M + CEPN +A++ + +A+E+ E +S G P
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE-----------MSEHGFP--A 707
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
YTYSS+++ + + V M + C + + ++ + GK
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITER 643
+ E G P+ + +T M+ + E + L+ M AP ++T R
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 22/255 (8%)
Query: 316 VYNAVLNACVPSHQWKGVFWV----FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
V+ LN V H G F + +L+ +PS +TY ++ L++ + D
Sbjct: 198 VFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI 257
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
R+M+ + + T + + + GK EA+ V E V Y +L LC
Sbjct: 258 HREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCE 314
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNIG 490
+++AM + ++++ P +T++ L+ ++ + C + M + C P+
Sbjct: 315 ASLFEEAMDFLNRMRA-TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 373
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRA-NSSGYTF-------LSGDGAPLKPD-----E 537
N+++ Y + S A +L ++ + + GY + GD L D E
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 538 YTYSSMLEASATAHQ 552
YS ML A ++
Sbjct: 434 KAYSEMLAAGVVLNK 448
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 31/265 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-------------VYTKLLAILGKAG 242
L+ G G +A + + + G KD D+ F Y LL K+
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 243 RPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
R EA ++ + M +E C P+ Y ++ L +VG L E ++ +K
Sbjct: 654 RVEEARKLLDAMSMEGCE--PNQIVYDALIDGLCKVGKLDE------------AQEVKTE 699
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
++ P L Y+++++ + V ++ ++ P+ Y ++ + +
Sbjct: 700 MSEHGFPA---TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
GK D ++ + M + G +TY ++ F GKI + + M +GV
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 422 YYELACCLCNNGRWQDAMLVVEKIK 446
Y L C NG A ++E++K
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMK 841
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 151/361 (41%), Gaps = 30/361 (8%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
+N++ + + ++P L+ +N ++N + + VF ++ + L P A TY +
Sbjct: 182 QNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILG 241
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
++ K D E F +M K G ++TY L+ EG+I EA+ + M ++G+ T
Sbjct: 242 HCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPT 301
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y LC+ GR DA+ +V + + P T+T +I G ++ I ++
Sbjct: 302 VYTYTVPISSLCDIGRVDDAINLVRSMGK-KGCSPSVQTYTAIISGLFRAGKMELAIGMY 360
Query: 479 QHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYT-FLSG---- 528
M K+ PN T NA++ F A ++F+ T AN+ Y + G
Sbjct: 361 HKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGM 420
Query: 529 ---------------DGAPLKPDEYTYSSML-EASATAHQWEYFEYVYKGMALSGCQLDQ 572
DG P TY++++ E + ++Y M S C+ D+
Sbjct: 421 DDIEKAMVVFNKMLKDGP--SPTVVTYNTLIVENLKRGYLNNATRFLYM-MKESNCEPDE 477
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
+ L+ + GK F +L+ G P+ +T M+ + + A++L
Sbjct: 478 RTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFER 537
Query: 633 M 633
M
Sbjct: 538 M 538
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 191/486 (39%), Gaps = 42/486 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT +++ L +AG+ A+ +++ ML++ L P+ Y+++ L G +K+ +
Sbjct: 339 TYTAIISGLFRAGKMELAIGMYHKMLKE-GLVPNTVTYNALINELCTEGRFGIALKIFDW 397
Query: 290 MR--------QKPSKRIKNMHRKN--------WDPVLE----PDLVVYNAVLNACVPSHQ 329
M Q ++ IK + + ++ +L+ P +V YN ++ +
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY 457
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+++S +P TY + + GK D FF +M K G + TY
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
++ + +EGKI+ A++ ME+ G + Y + L R+ +A K+ +
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE-Q 576
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 508
+P IT+T LI + IF M K +C PN T +++ + A
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA 636
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+ L E +P TYS+++ + + + M G
Sbjct: 637 ERLTENGC-----------------EPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGL 679
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAV 627
+ LLV ++ K F+ + G PH LF ++LI A+ S E+A+
Sbjct: 680 SPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPH-LFIYKVLICALCGVSRAEEAL 738
Query: 628 ALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 687
+ ++ ++ WT L + D K L + + N S T L+R L
Sbjct: 739 NIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILAREL 798
Query: 688 HALCRS 693
+ +S
Sbjct: 799 SKVGKS 804
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 124/270 (45%), Gaps = 15/270 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN +++ + F ++R+ G++P T+ ++ + G++D
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAA 459
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E F +M +S G TY +++ E+ A + M+++G+V Y L
Sbjct: 460 ELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVY 519
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
+GR+++A+ +E +K+ KP + L+ + G D +++ + MK D E +
Sbjct: 520 GRSGRYKEAIDCIEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVS 578
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I +N+++ + + +A + + F+ +G L+PD TY+++++A
Sbjct: 579 ILVLNSLINAFGEDRRVVEAFSVLQ-----------FMRENG--LRPDVITYTTLMKALI 625
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
Q++ +Y+ M SGC D+ A L
Sbjct: 626 RVEQFDKVPVIYEEMITSGCAPDRKARAML 655
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 25/322 (7%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL + + D
Sbjct: 347 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD--- 403
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ FN M E+ + PD+ ++++ + G +L
Sbjct: 404 RHFYNVMIDTFGKYNCLGHAMDAFNKMREE-GIEPDVVTWNTLIDAHCKGGRHDRAAELF 462
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E MR+ P YN ++N W+GV + ++++ GL P
Sbjct: 463 EEMRESNCP---------------PGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVP 507
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY ++V +SG+Y + M G Y LV A+ + G + A+ V
Sbjct: 508 NIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVV 567
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ M+ G+ + V L + R +A V++ ++ +P IT+T L+ + +
Sbjct: 568 KAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRE-NGLRPDVITYTTLMKALIR 626
Query: 468 GGHIDDCISIFQHM-KDHCEPN 488
D I++ M C P+
Sbjct: 627 VEQFDKVPVIYEEMITSGCAPD 648
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 113/286 (39%), Gaps = 28/286 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P YNA+L V K V ++ + G+ P ATY L ++ ++G+++
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
++M G + + ++ F + G +A A +R M+ GV Y +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
AM K++ +P +T+ LI + GG D +F+ M++ +C P
Sbjct: 415 GKYNCLGHAMDAFNKMRE-EGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPG 473
Query: 489 IGTVNAMLKVYSRND-------MFSKAKE------LFEETTRANSSGYT----------- 524
T N M+ + + M S+ KE + TT + G +
Sbjct: 474 TTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIE 533
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
+ DG LKP Y +++ A A ++ V K M G ++
Sbjct: 534 AMKADG--LKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEV 577
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 119/295 (40%), Gaps = 25/295 (8%)
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+KP Y ++ ++ + +M++ G A TY +LV A+ G+ A
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
++ ME GV ++ V+ + + G WQ A V+ ++++ +P + F ++I
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA-SGVRP-DRHFYNVMID 412
Query: 465 SMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+ GH D F M++ EP++ T N ++ + + +A ELFEE +N
Sbjct: 413 TFGKYNCLGHAMDA---FNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
P TY+ M+ WE E + M G + + L+
Sbjct: 470 C-------------PPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLV 516
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 633
R+G+ +++ G P P + L+ A Q + A+ ++ AM
Sbjct: 517 DVYGRSGRYKEAIDCIEAMKADGLKPSPTMY-HALVNAYAQRGLADHALNVVKAM 570
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 17/289 (5%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y L L KA + AL +F M E+ + P + Y+ + + G +++ + L+
Sbjct: 141 RISYNMLTYGLCKADQIDRALAVFGEMEENA-VVPSLLTYNGLLYGYCRAGRMEQAMTLL 199
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + +K D V PD+ YN V++ + Q +V +++ KSG P
Sbjct: 200 EEMIEG---------KKGSDVV--PDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSP 248
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ T+ ++ + +GK D + F M + A+TY VL+ +I++A
Sbjct: 249 NVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYF 308
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+M +RGV Y L LC+ + +DA+ +++++ S +P +T+T +I +
Sbjct: 309 VDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSS-TGREPNVVTYTRVIGALCK 367
Query: 468 GGHIDDCISIFQHM----KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
GG I+ +F C+P+ + ++ R F +A E F
Sbjct: 368 GGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYF 416
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 150/385 (38%), Gaps = 22/385 (5%)
Query: 336 VFK-QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
VFK R+ + + TY + +++ G + F M TY +++R
Sbjct: 23 VFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGL 82
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
++ K + A+ +++ME + + T + L CLC NG+ A E K L L
Sbjct: 83 CDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAY---ELYKRLSDECSL 139
Query: 455 E-ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ I++ L ID +++F M+++ P++ T N +L Y R +A L
Sbjct: 140 DRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLL 199
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
EE G+ + PD Y+Y++++ A Q YV + M SGC +
Sbjct: 200 EEMIEGKK---------GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNV 250
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
LL GK F+ ++E P + +T ++ +KA
Sbjct: 251 VTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVD 310
Query: 633 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
M +T L D +K+E L L ++ E V +R + ALC+
Sbjct: 311 MLRRGVEPNVYTYTALIGGLCD---ANKVEDALEILKRMSSTGREPNVVTYTRVIGALCK 367
Query: 693 S---EKERDLSSSAHFGSQAIDISP 714
E+ L + A GS+ P
Sbjct: 368 GGQIERATKLFNDA-MGSRTAKCKP 391
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 186/498 (37%), Gaps = 104/498 (20%)
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
M TE ++ +L+ + S + A V W +D + + F Y L L K G +
Sbjct: 1 MATEDDVIHVLENIK---SPKLASRVFKWAARQEDFQ--HTVFTYNAYLNALVKGGHGSK 55
Query: 247 ALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM- 301
A +IF+ ML ++C P+I Y V L ++L++ M K P+ I NM
Sbjct: 56 ARKIFDDMLYKEC--LPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNML 113
Query: 302 -----HRKNWDPVLEP----------DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
D E D + YN + + Q VF ++ ++ +
Sbjct: 114 VSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVV 173
Query: 347 PSAATY-GL---------------AMEVMLQSGK-YDLVHEFF----------------- 372
PS TY GL +E M++ K D+V + +
Sbjct: 174 PSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPT 233
Query: 373 -----RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
R+M KSG + +T+ L+ GK++EA A M +R TA Y L
Sbjct: 234 ARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLIT 293
Query: 428 CLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC- 485
R A V+ ++ R +P T+T LI D ++D + I + M
Sbjct: 294 GHARALRIDKANDYFVDMLR--RGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGR 351
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML- 544
EPN+ T ++ + +A +LF + + + A KPD Y YS+++
Sbjct: 352 EPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRT----------AKCKPDSYAYSTIVY 401
Query: 545 ---EASATAHQWEYF-----------EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
S +EYF ++YK MA G +L Q E + + L
Sbjct: 402 WLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMA-DGLELVQ--------ETEKVERVCL 452
Query: 591 LEHAFDSLLEAGEIPHPL 608
A L+ + P PL
Sbjct: 453 EASAHGIELQQKDAPQPL 470
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 149/338 (44%), Gaps = 28/338 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M Q G + LLKGL D+
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A+ +L + D D V YT ++ K G +A ++ ML D + P++
Sbjct: 179 QEALELLQMM--PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML-DRGILPNVV 235
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQ---------------------KPSKRIKNMHRK 304
Y S+ L + + + ++++ M + +P + I + +
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
+ D V EPD+V YN++++ + + +F + K GLKP TYG ++ G
Sbjct: 296 HSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
+H M ++G + +L+ A+ ++GK+++A+ M Q+G+ Y
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
+ LC +GR +DAM E++ R S P I + LI
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLI 451
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 137/339 (40%), Gaps = 25/339 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL AM ++ + + + + F Y LL L R EAL + +M
Sbjct: 132 LLKGLCADKRTSDAMDIV--LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189
Query: 256 ED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHR-KN 305
+D + PD+ +Y +V + G L + M + S I + + +
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249
Query: 306 WDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
D +E P+ YN++++ S Q K K++ G++P TY
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
M+ + ++G+ + F M K G TY L++ + +G + E + M + G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ V+ L C G+ AMLV K++ + P +T+ +I G ++D
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ-QGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 475 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ F+ M D P N+++ D + KAK+ F
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYF 467
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 126/332 (37%), Gaps = 32/332 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T LL L R +A+ I + P++ +Y+ LLK L E
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNI---------LLKGLCD--ENR 177
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ + ++ M D PD+V Y V+N + + ++ G+ P+
Sbjct: 178 SQEALELLQMMPDDGGD--CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVV 235
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + ++ D E M K+G TY +V + G+ EA+ ++ M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
GV Y L LC NGR +A + + + R KP T+ L+ G
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK-RGLKPEITTYGTLLQGYATKGA 354
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ + + M ++ PN + ++ Y++ +A +F + +
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG---------- 404
Query: 530 GAPLKPDEYTYSSMLEASATAHQWE----YFE 557
L PD TY +++ + + E YFE
Sbjct: 405 ---LNPDTVTYGTVIGILCKSGRVEDAMRYFE 433
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 120/296 (40%), Gaps = 19/296 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TYG+ + +G+ DL + K G
Sbjct: 64 VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+ + L++ + + ++A+ V R M Q G + Y L LC+ R Q+A+
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183
Query: 441 VVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
+++ + P + +++T +I G +D + M D PN+ T ++++
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ KA E+ + + P+ TY+S++ ++ Q +
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNG-------------VMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
K M G + D + L+ + G+C FDS+ + G P + +L
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
>gi|15235161|ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis thaliana]
gi|7270946|emb|CAB80625.1| putative protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 187/417 (44%), Gaps = 46/417 (11%)
Query: 158 IRVLVDRLSEREMTAKNW-KFVRIM--NQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
+R L+ R+S+RE K K+V+++ + L+F E LG W Q + V
Sbjct: 71 VRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEE---------LGKSDKWLQCLEVFR 121
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
W+ K + + VY+KL++++GK G+ A+ +F+ M ++ PD + Y+++
Sbjct: 122 WMQ--KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM-KNSGCRPDASVYNALITAH 178
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
++ K +E++R K +K + R +P++V YN +L A S + V
Sbjct: 179 LHT---RDKAKALEKVRGYLDK-MKGIER------CQPNVVTYNILLRAFAQSGKVDQVN 228
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+FK L S + P T+ M+ ++G + +M + +T+ VL+ ++
Sbjct: 229 ALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSY 288
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ---DAMLVVEKIKSLRHS 451
++ + + +++ + T + + + N G+ + A V +K+ + +
Sbjct: 289 GKKQEFEKMEQTFKSLMRSKEKPTLPTFNSM---IINYGKARMIDKAEWVFKKMNDMNYI 345
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKE 510
P IT+ +I+ G + IF+ + + T+NAML+VY RN ++ +A +
Sbjct: 346 -PSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADK 404
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
LF N+S + + PD TY + +A A E + + K M G
Sbjct: 405 LFH-----NASAFR--------VHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 45/251 (17%)
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-- 468
+QR + VY +L + G+ + AM + ++K+ +P + LI + +
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN-SGCRPDASVYNALITAHLHTRD 183
Query: 469 ---------GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
G++D I + C+PN+ T N +L+ ++++ + LF++
Sbjct: 184 KAKALEKVRGYLDKMKGI-----ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL---- 234
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
D +P+ PD YT++ +++A + E V M + C+ D L+
Sbjct: 235 ---------DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLI 285
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---------I 630
+ + +E F SL+ + E P F M+I NY KA + +
Sbjct: 286 DSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII------NYGKARMIDKAEWVFKKM 339
Query: 631 NAMAYAPFHIT 641
N M Y P IT
Sbjct: 340 NDMNYIPSFIT 350
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 178/417 (42%), Gaps = 41/417 (9%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ I+ + GRP E I + ++E + P + Y ++ L
Sbjct: 70 RTVRSR---TKLMNIMIEKGRPQEVQSILDSIIEGGH-KPSLVTYTTLLAALTIQKHFDS 125
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ +I ++ + +EPD + +NAV+NA S + F ++++
Sbjct: 126 IHSIISQVEENG---------------MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKE 170
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL-TYKVLVRAFWEEGKIN 401
SG KP+ +T+ ++ +G+ + + M++ L TY VLVRA+ + I
Sbjct: 171 SGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIM 230
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+A V M G+ A Y +A NG A ++ ++++ + +P E T +
Sbjct: 231 KAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQN-SNVQPNERTCCII 289
Query: 462 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTR 517
I G I + + MKD +PN+ N+++K + D ++ L EE
Sbjct: 290 IGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFG- 348
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+KPD T+S+++ A + A + ++ M + Q D ++
Sbjct: 349 ---------------VKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSI 393
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L RAG+ E ++++++G P+ + FT ++ E A+ + M
Sbjct: 394 LAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMC 450
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 60/306 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ + G+ ++AM + + +K+ + + L+ G AG P E+ ++ LM
Sbjct: 148 VINAFSESGNMQEAMK---YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMS 204
Query: 256 ED-----------------CN------------------LYPDIAAYHSVAVTLGQVGLL 280
+D CN L PD Y+++A Q G
Sbjct: 205 QDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEA 264
Query: 281 KELVKLIERMRQ---KPSKR------------------IKNMHRKNWDPVLEPDLVVYNA 319
+ +I M+ +P++R ++ ++R D L+P+LVV+N+
Sbjct: 265 SQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMK-DLGLQPNLVVFNS 323
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ + + GV V + + G+KP T+ M +G D E F M K+
Sbjct: 324 LIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKAR 383
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
A Y +L + + G+ +A + M + G ++ + C+ GR + A+
Sbjct: 384 IQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAI 443
Query: 440 LVVEKI 445
+ EK+
Sbjct: 444 KIFEKM 449
>gi|145517919|ref|XP_001444837.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412270|emb|CAK77440.1| unnamed protein product [Paramecium tetraurelia]
Length = 981
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 156/361 (43%), Gaps = 31/361 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDW--VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+KG G K A+++ + + G+K +R + LL K + + A R F
Sbjct: 434 LIKGCGRKKRLNDALNLFEEMKLIGIK-----PNRISFNSLLDSCVKCNKMNIAWRYFEE 488
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + ++PD Y +L +K R + + I + + +PD
Sbjct: 489 MRKQYGIFPDNFTY----------SILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPD 538
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
++YN++++ACV ++ + +F++++ ++PS+ TYG+ ++ + + + F
Sbjct: 539 EILYNSLIDACVKFNEIQKGMELFREMKNKQIEPSSVTYGILIKAYGKQNDLNGAFKIFE 598
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M + I +TY LV A ++++A+ + M+ + + +Y + C
Sbjct: 599 EMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIDQMKSQNLPINTVLYTTIIKGFCKLN 658
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 492
+ ++A+ + +K + P IT+ L+ + G ++ +FQ + D +P++ T
Sbjct: 659 QTEEAIKYFDLMKQSPKTYPNLITYNSLLDGMVKNGLLNQADKLFQELVDSKIKPDLITF 718
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ +LK + R + E + T G + PDE +LEA Q
Sbjct: 719 STLLKGHCRKGNMKRLNETVQIMT-------------GLQISPDESLLQLILEACLNQQQ 765
Query: 553 W 553
+
Sbjct: 766 Y 766
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 115/290 (39%), Gaps = 51/290 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY--PDIAAYHSVAVTLGQVGLLKELVKL 286
F YT L+ G + L++ + E+ Y PD Y+ + G L +L
Sbjct: 357 FTYTTLIN--GLKNSDNMDLKLAFSLFEEYKQYNQPDQIIYNCLLDACINAGDLNRGFQL 414
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M+Q + ++ D + YN ++ C + +F++++ G+K
Sbjct: 415 LNEMKQSQT--------------IQLDEITYNTLIKGCGRKKRLNDALNLFEEMKLIGIK 460
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS-GEAIGALTYKVLVRAFWEEGKINEAVA 405
P+ ++ ++ ++ K ++ +F +M K G TY +LV K N +
Sbjct: 461 PNRISFNSLLDSCVKCNKMNIAWRYFEEMRKQYGIFPDNFTYSILVNGI----KTNHS-- 514
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
N A+ ++E+I+ KP EI + LI +
Sbjct: 515 -------------------------NRDELLRAITLLEQIQETGQFKPDEILYNSLIDAC 549
Query: 466 MDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+ I + +F+ MK+ EP+ T ++K Y + + + A ++FEE
Sbjct: 550 VKFNEIQKGMELFREMKNKQIEPSSVTYGILIKAYGKQNDLNGAFKIFEE 599
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 29/265 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P +V N +++ ++Q + + F+ L+ + KP TY + + S DL
Sbjct: 317 IQPTIVTINTMIDQYFKNNQREKAWKTFENLKLTQTKPDNFTYTTLINGLKNSDNMDLKL 376
Query: 370 EF--FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
F F + + + + Y L+ A G +N + M+Q + + Y
Sbjct: 377 AFSLFEEYKQYNQP-DQIIYNCLLDACINAGDLNRGFQLLNEMKQSQTIQLDEITYNTLI 435
Query: 428 CLCN-NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-- 484
C R DA+ + E++K L KP I+F L+ S + ++ F+ M+
Sbjct: 436 KGCGRKKRLNDALNLFEEMK-LIGIKPNRISFNSLLDSCVKCNKMNIAWRYFEEMRKQYG 494
Query: 485 CEPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
P+ T VN + +S D +A L E+ + KPDE Y
Sbjct: 495 IFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQ------------ETGQFKPDEILY 542
Query: 541 SSMLEASATAHQWEYFEYVYKGMAL 565
+S+++A F + KGM L
Sbjct: 543 NSLIDACVK------FNEIQKGMEL 561
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/549 (17%), Positives = 220/549 (40%), Gaps = 43/549 (7%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
V+ DV G + + W +KR + + L+ L E + WK ++ M ++
Sbjct: 92 VMKTDV--GVNVKMQFFRWAAKKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNP 149
Query: 186 L-MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+ + T ++ +++ LG+ +A+++ Y +K ++ + Y ++ +L G+
Sbjct: 150 VCVVTPMELSDIIRMLGNAKMISKAVAIF---YQIKVRKCQPTAQAYNSMIIMLMHEGQY 206
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR---QKPSKRIKNM 301
+ ++N M + + +PD Y ++ ++G ++L+ M+ +P+ +I M
Sbjct: 207 EKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTM 266
Query: 302 ------HRKNWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
N L PD+ Y ++ + ++ + F ++R+ G
Sbjct: 267 LIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREG 326
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEA 403
+P + + ++G+ D + F +M +TY +++A +E + +I+E
Sbjct: 327 CRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEI 386
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ M+ G+ + Y L C R + AM+++E++ + P + LI
Sbjct: 387 SSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDE-KGFPPCPAAYCSLID 445
Query: 464 SSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSG 522
+ D +FQ +K++C + V A M+K + A LF+E + +
Sbjct: 446 ALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCT- 504
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
P+ Y Y++++ A A + + M GC D + +L
Sbjct: 505 ------------PNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGL 552
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE 642
++ G H ++ ++ P + + +L +E+A L+ M F
Sbjct: 553 AKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDL 612
Query: 643 RQWTELFES 651
++ + E+
Sbjct: 613 ITYSSILEA 621
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 91/227 (40%), Gaps = 27/227 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + T K + M++ G L+ LG + A + L
Sbjct: 407 ILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQ---EL 463
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ LGKAGR +A+ +F+ M P++ AY+++ L + G+
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEM-NKLGCTPNVYAYNALMSGLARAGM 522
Query: 280 LKELVKLIERMRQ-------KPSKRIKNMHRKNWDP-------------VLEPDLVVYNA 319
L E + + RM++ I N K P ++PD V YN
Sbjct: 523 LDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNT 582
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
VL A + ++ + K++ G + TY +E + GK D
Sbjct: 583 VLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAI---GKVD 626
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 138/332 (41%), Gaps = 23/332 (6%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D + P++ YNA+++ + ++ +FK++ GL+P+ TY + + + + G +
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F KM G + Y L+ + ++G ++ A + M + G+ TA+ Y L
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
LC NG AM + ++ R TFT LI +D+ +F M D +
Sbjct: 451 AGLCRNGDLSSAMELHREMAE-RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PN T N M++ Y KA +L+++ LKPD YTY S++
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG-------------LKPDNYTYRSLIS 556
Query: 546 A----SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
S + E+ + A+ L+ LL R G+ H +D +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAV----LNNFSLTALLYGLFREGRFTETYHLWDEMAVR 612
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G + FT ++ A+ Q + EK+ L M
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 148/402 (36%), Gaps = 53/402 (13%)
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S +T+ Q + L L+ ++RQ R ++ K + D VY A + A S
Sbjct: 156 SSGITVNQYTASQILFSLV-KIRQFALAR--DLFDKMLQSGVHLDEYVYTAGIRAYCESR 212
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
G + ++ G+K SA Y + M + ++ + E M G +TY+
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY----------------YELAC----- 427
LV F ++ A+ +M + G V + + + LAC
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332
Query: 428 --------------CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
LC N R+ DA + +++ R +P E+T+ LI + G I+D
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAG-RGLEPNEVTYAILIHALCKRGMIED 391
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ +F M+D + + N+++ Y + +A+ L +
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG------------- 438
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
L P +YS ++ +++ MA G + L+ + K
Sbjct: 439 LTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAA 498
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
FD ++++ IP+ + F M+ + N KA L + M
Sbjct: 499 RLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 99/504 (19%), Positives = 190/504 (37%), Gaps = 48/504 (9%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
A L+D+L + E + + M GL E L+ L +G A+ + D
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD-- 397
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
++DK + + Y L+ K G A + + M+++ L P A+Y + L +
Sbjct: 398 -KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE-GLTPTAASYSPLIAGLCR 455
Query: 277 VGLLKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVV 316
G L ++L M + K + K D + P+ V
Sbjct: 456 NGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+N ++ + F ++ Q+ + GLKP TY + + + +EF +
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRW 435
S + + L+ + EG+ E M RGV + S + L + +
Sbjct: 576 NSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
+ +L E + + KP +I +T +I + ++ ++ + M D PN T
Sbjct: 636 KSCVLFREMKE--QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTV 693
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ ++ A+ L +E N + P+++TY+ L+ AT E
Sbjct: 694 LINNLCKSGYLGSAELLCKEMLAGN-------------VLPNKFTYNCFLDYFATEGDME 740
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD---SLLEAGEIPHPLFFT 611
+ ++ M L G L+ +AGK ++ A D + E+G P + ++
Sbjct: 741 KAKDLHSAM-LQGHLASIVSFNILIKGLCKAGK---IQEAIDLMRKITESGFSPDCISYS 796
Query: 612 EMLIQAIVQSNYEKAVALINAMAY 635
++ + + KA L N M Y
Sbjct: 797 TIIHELCKMGDINKAFELWNEMLY 820
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/373 (19%), Positives = 138/373 (36%), Gaps = 50/373 (13%)
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
SG+ + T + +++ ++ L + F KM +SG + Y +RA+ E ++
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A V ME GV +A Y L LC N R Q+A+ V + ++ + E+T+ L+
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTAD-EVTYRTLV 275
Query: 463 ISSMDGGHIDDCISIFQHM--------KDHCE---------------------------- 486
++ + I M + +C
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ NA++ +N+ F A LF+E ++G G L+P+E TY+ ++ A
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKE-----------MAGRG--LEPNEVTYAILIHA 382
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
E ++ M G ++ + L+ + G +++ G P
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLN 666
++ ++ + A+ L MA +T L D+ +L +
Sbjct: 443 AASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502
Query: 667 ALCNCNAASSEIT 679
+ + N +E+T
Sbjct: 503 KMIDSNVIPNEVT 515
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 139/343 (40%), Gaps = 36/343 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR ++F M + PD A Y+ + G G KE+V+L
Sbjct: 380 TYRVLLDLYGRQGRFDGVRQLFREM--RTAVPPDTATYNVLFRVFGDGGFFKEVVELFHD 437
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + ++PD+V V+ AC V + + + G+ P+A
Sbjct: 438 MLKTG---------------VQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTA 482
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E + + Y+ + F M + G TY L A+ G EA A
Sbjct: 483 DAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSR 542
Query: 410 MEQR-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M G+ + + L C R DA+ +++ R + P E + G++ +
Sbjct: 543 MSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFN-PDERSLEGVLNAYCIA 601
Query: 469 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTF 525
G ID+ F+ ++ P++ ML +Y+RND ++ A +L EE T RA+S+
Sbjct: 602 GVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVI 661
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
A L EY SS W+ EYV + + GC
Sbjct: 662 -----ASLIKGEYDDSS---------NWQMVEYVLENSTMEGC 690
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 162/451 (35%), Gaps = 52/451 (11%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG----LLK 281
++ YT L+A + EA + + M + + P A Y++V +
Sbjct: 194 RTALSYTSLIAAYARNALHEEARALLDQM-KATGVAPTAATYNTVLAACARATDPPVPFD 252
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
L+ L MR S P + PDL YN +L A + +
Sbjct: 253 MLLGLFAEMRHDAS------------PSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTML 300
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
++G+ P +Y ++ +G E F +MA +G A Y L+ A G
Sbjct: 301 EAGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATA 360
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTG 460
+AVA +R M+ G TA+ Y L GR+ V + + +R + P + T+
Sbjct: 361 DAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDG---VRQLFREMRTAVPPDTATYNV 417
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L DGG + + +F M K +P++ T ++ + A+E+ E TR
Sbjct: 418 LFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREG 477
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ P Y+ ++EA A +E + M G + L
Sbjct: 478 -------------MVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALA 524
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALINAMAYAPF 638
+R G E F + I + LI+A Q S + AV M + F
Sbjct: 525 FAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRF 584
Query: 639 HITERQWTELFESNEDRISRDKLEKLLNALC 669
+ ER LE +LNA C
Sbjct: 585 NPDER----------------SLEGVLNAYC 599
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 104/506 (20%), Positives = 211/506 (41%), Gaps = 51/506 (10%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M SGL+ L++G + + RQ +L +K + + S + Y ++ +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELL---VEMKKRNIVISPYTYGTVVKGMCS 429
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
+G A I M+ P++ Y ++ T Q + +++++ M+++
Sbjct: 430 SGDLDGAYNIVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG------ 482
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+ PD+ YN+++ + + ++ ++GLKP+A TYG + +
Sbjct: 483 ---------IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++ ++ ++ ++M + G + L+ + ++GK+ EA +A R+M +G++G A
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y L L N + DA + +++ + P ++ LI G++ SIF
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 481 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYTFL------SGD 529
M ++ PN+ N +L + R+ KAKEL +E + N+ Y + SGD
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 530 GAP------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
A L PD + Y+++++ + E ++ G GC
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNA 771
Query: 578 LLVEASRAGKCHLLEHAFDSLLEA-----GEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
L+ + GK L + L++ G+ P+ + + M+ + N E A L +
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGK-PNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 633 MAYAPFHITERQWTELFESNEDRISR 658
M A T +T L + D++ R
Sbjct: 831 MQNANLMPTVITYTSLL-NGYDKMGR 855
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 127/347 (36%), Gaps = 32/347 (9%)
Query: 322 NACVPSHQWKGVF----WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
+ C+ +GV +F + SGL P A Y +E + +E +M K
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
I TY +V+ G ++ A V+ M G +Y L N R+ D
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
AM V++++K + P + LII +D+ S M ++ +PN T A +
Sbjct: 471 AMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 497 KVYSRNDMFSKA----KELFEETTRAN--------------------SSGYTFLSGDGAP 532
Y F+ A KE+ E N S Y + G
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG-- 587
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
+ D TY+ ++ + + E +++ M G D + L+ S+ G
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 639
FD ++E G P+ + + +L EKA L++ M+ H
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 186/438 (42%), Gaps = 72/438 (16%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS---------KRIKNMHRKNWDPVL 310
+++A +S+ + G +G+++EL+ + M++ +PS + ++ ++ + VL
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190
Query: 311 E--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
E PD+V YN ++ + + F F+ + + P TY ++
Sbjct: 191 EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAE 250
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G +DL + +M ++G I Y +++ +EGK E A M Q+G ++Y
Sbjct: 251 GDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIY 310
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHM 481
L G +AML+ E++K +P +T+ G++++ M G +D+ + +
Sbjct: 311 TALIDSNAKCGNMGEAMLLFERMKK-EGLEPDVVTY-GVVVNCMCKSGRLDEAMEYLE-- 366
Query: 482 KDHCEPNIGTVNAMLKVYS-------RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
C N VNAML YS + +A++LFEE + G P
Sbjct: 367 --FCRVNGVAVNAML--YSSLIDGLGKAGRVHEAEKLFEEMVK-----------KGCP-- 409
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
PD Y Y+++++A A + + +K M GC DQT + + ++ + + H E A
Sbjct: 410 PDSYCYNALIDALAKCGKTDEALAFFKRMEDEGC--DQTVYTYTIM-INGLFREHKNEEA 466
Query: 595 F---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
D +++ G P F + I + +A L++ + AP +
Sbjct: 467 LKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDEL--APMGV----------- 513
Query: 652 NEDRISRDKLEKLLNALC 669
I E +LN LC
Sbjct: 514 ----IPETAFEDMLNVLC 527
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 119/268 (44%), Gaps = 19/268 (7%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M+++GL ++ GL +G + +V + + K ++ +YT L+ K
Sbjct: 263 MDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVA---IYTALIDSNAK 319
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G EA+ +F M ++ L PD+ Y V + + G L E ++ +E R
Sbjct: 320 CGNMGEAMLLFERMKKE-GLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNG------ 372
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+ + ++Y+++++ + + +F+++ K G P + Y ++ +
Sbjct: 373 ---------VAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALA 423
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ GK D FF++M G TY +++ + E K EA+ M +G+ TA+
Sbjct: 424 KCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAA 483
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ L+ LC +G+ A +++++ +
Sbjct: 484 AFRALSIGLCLSGKVARACKLLDELAPM 511
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y+ L+ LGKAGR HEA ++F M++ PD Y+++ L + G E + +R
Sbjct: 379 LYSSLIDGLGKAGRVHEAEKLFEEMVKK-GCPPDSYCYNALIDALAKCGKTDEALAFFKR 437
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M D + + Y ++N H+ + ++ + G+ P+A
Sbjct: 438 ME---------------DEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTA 482
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
A + + SGK + ++A G I ++ ++ + G+I EA
Sbjct: 483 AAFRALSIGLCLSGKVARACKLLDELAPMG-VIPETAFEDMLNVLCKAGRIKEACKLADG 541
Query: 410 MEQRG 414
RG
Sbjct: 542 FVDRG 546
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 28/314 (8%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLL 280
+R + F Y LL L R EAL + ++M +D + PD+ +Y +V G
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVIN-----GFF 99
Query: 281 KE--LVKLIERMRQKPSKRIKN------MHRKNWDPVLE-----------PDLVVYNAVL 321
KE L K++++ R P+ N + D +E PD + YN+++
Sbjct: 100 KEGDLDKMLDQ-RISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 158
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ S Q K K++R G++P TY M+ + ++G+ + F M K G
Sbjct: 159 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 218
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
TY L++ + +G + E + M + G+ V+ L C + ++AMLV
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 278
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
K++ + P +T+ +I G ++D + F+ M D P+ N+++
Sbjct: 279 FSKMRQ-QGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLC 337
Query: 501 RNDMFSKAKELFEE 514
D + KA+ELF E
Sbjct: 338 IFDKWEKAEELFLE 351
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 120/287 (41%), Gaps = 19/287 (6%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
++R ++ L + + K + + M +SG+M ++ G G +
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 168
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ L + + D+ + Y L+ L K GR EA +IF+ M + L PDI Y
Sbjct: 169 EAIVFLKKMRSDGVEPDVVT---YNSLMDYLCKNGRCTEARKIFDSMTKR-GLKPDITTY 224
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ G L E+ L++ M + + P+ V++ ++ A
Sbjct: 225 GTLLQGYATKGALVEMHGLLDLMVRNG---------------IHPNHYVFSILVCAYAKQ 269
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + VF ++R+ GL P+A TYG ++V+ +SG+ + +F +M G ++ Y
Sbjct: 270 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVY 329
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
L+ + K +A M RG+ + + + C GR
Sbjct: 330 NSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 118/306 (38%), Gaps = 26/306 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVF--WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
PD+V Y+ V+N G F ++ + P+ TY + + ++ D
Sbjct: 86 PDVVSYSTVIN---------GFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAM 136
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E M KSG +TY +V F G+ EA+ ++ M GV Y L L
Sbjct: 137 EVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 196
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C NGR +A + + + R KP T+ L+ G + + + M ++ PN
Sbjct: 197 CKNGRCTEARKIFDSMTK-RGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 255
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ ++ Y++ + +A +F + + L P+ TY ++++
Sbjct: 256 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQG-------------LNPNAVTYGTVIDVLC 302
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + E ++ M G + D + L+ K E F +L+ G +
Sbjct: 303 KSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTI 362
Query: 609 FFTEML 614
FF ++
Sbjct: 363 FFNSII 368
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 92/221 (41%), Gaps = 23/221 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 192 LMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNG 251
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K + EA+ +F+ M + L P+ Y +V L + G
Sbjct: 252 IH-----PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ-GLNPNAVTYGTVIDVLCKSG 305
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+++ + E+M D L PD +VYN+++++ +W+ +F
Sbjct: 306 RVEDAMLYFEQM---------------IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFL 350
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ G+ S + ++ + G+ + F M + G
Sbjct: 351 EMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIG 391
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 138/326 (42%), Gaps = 15/326 (4%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
V P V++A+ + + + F ++++ + P + + + GK D V
Sbjct: 58 VCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 117
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
FF+ M +G TY +++ W+EG I A M+ RG++ Y +
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDG 177
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
GR D + E++KS+ +P IT+ LI G + + ++ MK +P
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMS-CEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKP 236
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ + + ++ + + DM +A + + + R G+ P+E+TY+S+++A+
Sbjct: 237 NVVSYSTLVDAFCKEDMMQQAIKFYVDMRRV---GHV----------PNEFTYTSLVDAN 283
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ M G + + + L+ A + E F ++ AG IP+
Sbjct: 284 CKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNL 343
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAM 633
+ ++ + N ++A+ L+N +
Sbjct: 344 ASYNALIHGFVKAKNMDRALELLNEL 369
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 120/288 (41%), Gaps = 19/288 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD V YN++++ + + F++++ +P TY + +SGK
Sbjct: 164 LIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGL 223
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
EF+R+M +SG ++Y LV AF +E + +A+ +M + G V Y L
Sbjct: 224 EFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDAN 283
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C G DA + ++ + + +T+T LI D + + +F M PN
Sbjct: 284 CKIGNLSDAFRLANEMLEVGVEWNV-VTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPN 342
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + NA++ + + +A EL E L G G ++PD Y + +
Sbjct: 343 LASYNALIHGFVKAKNMDRALELLNE-----------LKGRG--IQPDLLLYGTFIWGLC 389
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK----CHLLE 592
+ E + V M +G + + + L+ ++G HLLE
Sbjct: 390 GLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLE 437
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/371 (17%), Positives = 157/371 (42%), Gaps = 35/371 (9%)
Query: 214 DWVYGLKDKRDLKSR---FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
D VY ++ + + Y L+ K+G+ + L + M + L P++ +Y ++
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQS-GLKPNVVSYSTL 244
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ ++++ +K MR R+ ++ P+ Y ++++A
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMR-----RVGHV----------PNEFTYTSLVDANCKIGNL 289
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
F + ++ + G++ + TY ++ + + + + F KM +G +Y L
Sbjct: 290 SDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNAL 349
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ F + ++ A+ + ++ RG+ +Y LC + + A +V+ +++
Sbjct: 350 IHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQE-NG 408
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMFSKA 508
K + +T L+ + G+ + + + + M+ DH E + T ++ +N + SKA
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDH-EVTVVTFCVLIDGLCKNKLVSKA 467
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+ F + N G L+P+ Y++M++ +Q + +++ MA G
Sbjct: 468 IDYFGRMS--NDFG----------LQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGL 515
Query: 569 QLDQTKHAWLL 579
D+T + L+
Sbjct: 516 VPDRTAYTSLM 526
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 28/209 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV---GLLKELVK 285
+YT L+ K+G P E L + M E H V V V GL K K
Sbjct: 414 LIYTTLMDAYFKSGNPTEGLHLLEEMQE---------LDHEVTVVTFCVLIDGLCKN--K 462
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L+ SK I R + D L+P+ VY A+++ +Q K +F+Q+ + GL
Sbjct: 463 LV-------SKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGL 515
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P Y M+ L+ G KMA+ G + L Y LV F + ++ +A +
Sbjct: 516 VPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARS 575
Query: 406 AVRNM-------EQRGVVGTASVYYELAC 427
+ M ++ +G +YEL C
Sbjct: 576 FLEEMIGEEILPDEVLCIGVLKKHYELGC 604
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 123/321 (38%), Gaps = 19/321 (5%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L++ + K +F R M QSGL L+ + +QA + + ++
Sbjct: 209 LINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQA---IKFYVDMR 265
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ + F YT L+ K G +A R+ N MLE + ++ Y ++ L +
Sbjct: 266 RVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLE-VGVEWNVVTYTALIDGLCDAERM 324
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE KL +M + P+L YNA+++ V + + +L
Sbjct: 325 KEAEKLFGKMVTAG---------------VIPNLASYNALIHGFVKAKNMDRALELLNEL 369
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ G++P YG + + K + +M ++G L Y L+ A+++ G
Sbjct: 370 KGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNP 429
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
E + + M++ T + L LC N A+ ++ + +P +T
Sbjct: 430 TEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTA 489
Query: 461 LIISSMDGGHIDDCISIFQHM 481
+I + ++F+ M
Sbjct: 490 MIDGLCKENQVKAATTLFEQM 510
>gi|255661004|gb|ACU25671.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 369
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 151/373 (40%), Gaps = 38/373 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + + + F +++ + + G + S A++ + V+ +GK +
Sbjct: 21 VSPDAVVYNAMLNGFYRAGRIEDCFELWEMMGREG-RRSVASFNTMIRVLFDNGKVEEAM 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
MAKSG + TY LV F + IN+++ + EQ+G V A Y + L
Sbjct: 80 SIRELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQKGGVLDAFAYSAMINAL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
C + + A+ V+ IKS KP + LI + +DD I +F M H P
Sbjct: 140 CKEAKLEKAVCVLNGMIKS--GCKPNTCVYNALIKGLVGASKLDDAIRVFHEMGTTHSPP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
+I T N ++ + D F +A +L +E L P TYS +++
Sbjct: 198 DIVTYNILINGLFKGDRFGEAYDLVKEMLEKG-------------LDPSVITYSLLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ E ++ + G + D H L+ GK L + + P+
Sbjct: 245 CLGDKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPN- 303
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF--ESNEDRISRDKLEKLL 665
++ Q + + K + NA+ W + E D IS + L
Sbjct: 304 -----LVTQNTLMQGFYKDGNIRNALVI---------WARILRNELQPDIISYN---ITL 346
Query: 666 NALCNCNAASSEI 678
LC+CN S I
Sbjct: 347 KGLCSCNRISDAI 359
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 104/506 (20%), Positives = 211/506 (41%), Gaps = 51/506 (10%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M SGL+ L++G + + RQ +L +K + + S + Y ++ +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELL---VEMKKRNIVISPYTYGTVVKGMCS 429
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
+G A I M+ P++ Y ++ T Q + +++++ M+++
Sbjct: 430 SGDLDGAYNIVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG------ 482
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+ PD+ YN+++ + + ++ ++GLKP+A TYG + +
Sbjct: 483 ---------IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++ ++ ++ ++M + G + L+ + ++GK+ EA +A R+M +G++G A
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y L L N + DA + +++ + P ++ LI G++ SIF
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 481 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYTFL------SGD 529
M ++ PN+ N +L + R+ KAKEL +E + N+ Y + SGD
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 530 GAP------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
A L PD + Y+++++ + E ++ G GC
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNA 771
Query: 578 LLVEASRAGKCHLLEHAFDSLLEA-----GEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
L+ + GK L + L++ G+ P+ + + M+ + N E A L +
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGK-PNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 633 MAYAPFHITERQWTELFESNEDRISR 658
M A T +T L + D++ R
Sbjct: 831 MQNANLMPTVITYTSLL-NGYDKMGR 855
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 127/347 (36%), Gaps = 32/347 (9%)
Query: 322 NACVPSHQWKGVF----WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
+ C+ +GV +F + SGL P A Y +E + +E +M K
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
I TY +V+ G ++ A V+ M G +Y L N R+ D
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
AM V++++K + P + LII +D+ S M ++ +PN T A +
Sbjct: 471 AMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 497 KVYSRNDMFSKA----KELFEETTRAN--------------------SSGYTFLSGDGAP 532
Y F+ A KE+ E N S Y + G
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG-- 587
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
+ D TY+ ++ + + E +++ M G D + L+ S+ G
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 639
FD ++E G P+ + + +L EKA L++ M+ H
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 152/342 (44%), Gaps = 41/342 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL- 286
F YT+L+ LGKAGR EA F + E C PD +++ LG+ G L + +KL
Sbjct: 1291 FTYTELIRGLGKAGRIDEAYHFFCEMQREGCR--PDTVFMNNMINFLGKAGRLDDAMKLF 1348
Query: 287 --IERMRQKPSKRIKNMHRK-------------NW-----DPVLEPDLVVYNAVLNACVP 326
+E +R PS N K +W + + P Y+ +++
Sbjct: 1349 QEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCK 1408
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+++ + + +++ + G P A Y ++ + ++ +YDL E F+++ ++ + A
Sbjct: 1409 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 1468
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y V+++ + G++++A+ M + G Y L L G +A+ + +++
Sbjct: 1469 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 1528
Query: 447 SLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 504
H +I +I++ + G + + +MK P++ + N +L S M
Sbjct: 1529 --EHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGM 1586
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
F +A +L +E N+ G+ + D TYSS+LEA
Sbjct: 1587 FEEASKLMKEM---NTLGFEY----------DLITYSSILEA 1615
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/552 (17%), Positives = 222/552 (40%), Gaps = 49/552 (8%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
V+ DV G + + W ++R + + L+ L E + WK ++ M ++
Sbjct: 1086 VMKTDV--GVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNP 1143
Query: 186 L-MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+ + T ++ +++ LG+ RQA+++ Y +K ++ Y ++ +L G+
Sbjct: 1144 ICVVTPTELSDVVRMLGNAKMVRQAITIF---YQIKTRKCQPIAQAYNSMIIMLMHEGQY 1200
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM 301
+ +++N M + + +PD Y ++ ++G ++L+ M++ +P+ +I M
Sbjct: 1201 EKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTM 1260
Query: 302 --------------------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
R + PD+ Y ++ + + + F +++
Sbjct: 1261 LIALFFKFNDAHGALSLFEEMRHQY---CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQ 1317
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKI 400
+ G +P + + ++G+ D + F++M +TY +++A +E + +
Sbjct: 1318 REGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRA 1377
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+E + M++ G+ ++ Y L C R + AM+++E++ + P +
Sbjct: 1378 SEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE-KGFPPCPAAYCS 1436
Query: 461 LIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRAN 519
LI + D +FQ +K++C + V A M+K + A +F+E +
Sbjct: 1437 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 1496
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ PD Y Y++++ A + + M GC D + +L
Sbjct: 1497 CA-------------PDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIIL 1543
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 639
++ G H ++ ++ P + + +L +E+A L+ M F
Sbjct: 1544 NGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFE 1603
Query: 640 ITERQWTELFES 651
++ + E+
Sbjct: 1604 YDLITYSSILEA 1615
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 29/232 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 1401 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE---L 1457
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ LGKAGR +A+ +F+ M PD+ AY+++ L + G+
Sbjct: 1458 KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM-NKLGCAPDVYAYNALMSGLARTGM 1516
Query: 280 LKELVKLIERMRQKPS-------KRIKNMHRKNWDP-------------VLEPDLVVYNA 319
L E + + RM++ I N K P + PD+V YN
Sbjct: 1517 LDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNT 1576
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
VL A + ++ + K++ G + TY +E + GK D HE+
Sbjct: 1577 VLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI---GKVD--HEY 1623
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 169/426 (39%), Gaps = 43/426 (10%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF---VYTKLLAILGKAGRPHEALRIF 251
+LLKGL D +AM VL L+ ++ R Y LL L R EA +
Sbjct: 124 QLLKGLCDTKRVGEAMHVL-----LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELL 178
Query: 252 NLML--EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
++M+ +D + PD+ +Y+ V G + + L M
Sbjct: 179 HMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMG------------------ 220
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD+V YN +++ + + VF+Q+ + G+KP+ TY ++ + ++ + D+
Sbjct: 221 VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAE 280
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F+KM G +TY ++ + ++ A + M RGV Y + L
Sbjct: 281 GVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGL 340
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C A V +++ + KP +T+T +I +D +FQ M D +PN
Sbjct: 341 CKAQAIDKAEGVFQQMID-KGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
GT N ++ Y + + + +E + + L+PD +TY +L+
Sbjct: 400 NGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD-------------LEPDVFTYGLLLDYLC 446
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ ++ M G + T + +L + G + + ++ G P+
Sbjct: 447 KNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHR 506
Query: 609 FFTEML 614
F ++
Sbjct: 507 IFNTVI 512
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/430 (19%), Positives = 169/430 (39%), Gaps = 45/430 (10%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ DK S Y ++ L KA A +F M+ D + PD Y+++ L +
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI-DRGVKPDHVTYNTIIDGLCKAQ 344
Query: 279 LLKELVKLIERMRQKPSK--------------------RIKNMHRKNWDPVLEPDLVVYN 318
+ + + ++M K K R + + ++ D ++P+ YN
Sbjct: 345 AIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYN 404
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+++ + + QW+ V K++ L+P TYGL ++ + ++GK + F M +
Sbjct: 405 CLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRK 464
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G Y +++ + ++G ++E + M G+ ++ + C +
Sbjct: 465 GIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEV 524
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
M + K+K + P +T+ LI + G +DD + F M + PN N+++
Sbjct: 525 MHIFIKMKQ-QGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVY 583
Query: 498 VYSRNDMFSKAKELFEETTRAN--------SSGYTFLSGDG--------------APLKP 535
D + K +ELF E ++ L +G LKP
Sbjct: 584 GLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKP 643
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
D +Y+++++ A + + + GM +G + + + LL +AG+ F
Sbjct: 644 DVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLF 703
Query: 596 DSLLEAGEIP 605
+L G P
Sbjct: 704 REMLRKGVTP 713
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 141/359 (39%), Gaps = 21/359 (5%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D L + + + + M G+ G L+ G G W + + + +
Sbjct: 370 IIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAH 429
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ D+ F Y LL L K G+ +EA +F+ M+ + P + Y + G+ G
Sbjct: 430 DLEPDV---FTYGLLLDYLCKNGKCNEARSLFDSMIRK-GIKPSVTIYGIMLHGYGKKGA 485
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E+ L+ M + P+ ++N V+ A V +F +
Sbjct: 486 LSEMHDLLNLMVANG---------------ISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+++ GL P+ TYG ++ + + G+ D F +M G + + LV K
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ M +G+ + + C LC GR +A +++ + + KP I++
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCM-GLKPDVISYN 649
Query: 460 GLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
LI +D+ + + M +PNI + N +L Y + A LF E R
Sbjct: 650 TLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLR 708
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 120/269 (44%), Gaps = 20/269 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ +L L K GR EA R+ + M+ C L PD+ +Y+++ + E VKL++
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMV--CMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG 670
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M L+P++V YN +L+ + + + +F+++ + G+ P
Sbjct: 671 MVSAG---------------LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + +SG++ E + M KS + TY +++ F + +EA ++
Sbjct: 716 ETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQS 775
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ + + + L GR +DAM + I + P +T+ + + ++ G
Sbjct: 776 LCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPA-NGLVPSVVTYRLIAENLIEEG 834
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
+++ +F M K PN +NA+++
Sbjct: 835 SLEELDCLFSVMEKSGTAPNSHMLNALIR 863
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/394 (18%), Positives = 153/394 (38%), Gaps = 37/394 (9%)
Query: 247 ALRIFNLMLEDCN--LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
A+ FN ML DC+ + PD Y V ++G L EL + K R+
Sbjct: 65 AVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRL-ELGFAAFGLILKTGWRVD----- 118
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
D+VV + C + + + +Q+ + G + +Y ++ + +
Sbjct: 119 --------DIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRR 170
Query: 365 YDLVHEFFRKMAK---SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+ E M S + ++Y +++ F+ EG++++A + M GV
Sbjct: 171 AEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVT 227
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y + LC A V +++ + KP +T+ +I +D +FQ M
Sbjct: 228 YNTIIDGLCKAQEVDRAEDVFQQMVE-KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKM 286
Query: 482 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
D +P+ T N ++ + +A+ +F++ +KPD TY
Sbjct: 287 VDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG-------------VKPDHVTY 333
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+++++ A + E V++ M G + D + ++ +A E F +++
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
G P+ + ++ + +E+ V I M+
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ +LD + K ++ S Y LL KAGR A +F ML + P + Y
Sbjct: 663 EAVKLLDGMVSAGLKPNIVS---YNTLLHGYCKAGRIDNAYCLFREMLRK-GVTPGVETY 718
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN-WDPV--------- 309
+++ L + G E +L M + S + + N +D
Sbjct: 719 NTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCS 778
Query: 310 --LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
L+ D++ +N +++ + + +F + +GL PS TY L E +++ G +
Sbjct: 779 MDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE 838
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ F M KSG A + L+R + G+I A A + ++++
Sbjct: 839 LDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEK 884
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 163/389 (41%), Gaps = 42/389 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G A++VL+ ++ + L YT LL K +A+++ + M
Sbjct: 172 LIRGLCGRGRTSNALAVLEDMF---RRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM- 227
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D PDI Y+ V + Q G +++ ++ + KN+ EP+ V
Sbjct: 228 HDKGCAPDIVTYNVVLNGICQEGRVEDAMEFL-----------KNLPSYGC----EPNTV 272
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN VL + +W+ + +++ G P+ T+ + + + + G + E +M
Sbjct: 273 SYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQM 332
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +L+Y L+ AF ++ KI++A+ V M RG Y L LC NG
Sbjct: 333 PQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEV 392
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
A+ ++ ++K + P+ I++ +I G + + + M +P+I T +
Sbjct: 393 DVAIELLHQLKD-KGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYST 451
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA----TA 550
+ R D EE R TF ++P Y+++L T
Sbjct: 452 IASGLCREDR-------IEEAVR------TFCKVQDMGIRPTAALYNAILLGLCKRRETH 498
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ + F Y M SGC +++ + L+
Sbjct: 499 NAIDLFAY----MISSGCMPNESTYTILV 523
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/432 (19%), Positives = 163/432 (37%), Gaps = 40/432 (9%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
L+ L +G A+ ++D + GL + L+ L +GR +A R+
Sbjct: 74 LRVLVRRGELDDALRLVDSLAGLNPPSP-AAVGPCAALIKKLCASGRTADARRVLAAS-- 130
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
PD+ Y+++ G L +L+ M PV EPD
Sbjct: 131 ----GPDVMVYNAMVAGYCGAGQLDAARRLVADM-----------------PV-EPDAYT 168
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN ++ + V + + + G P TY + +E + Y + +M
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH 228
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G A +TY V++ +EG++ +A+ ++N+ G Y + L RW+
Sbjct: 229 DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 495
DA ++E++ + P +TF LI G ++ + + + M + C PN + N +
Sbjct: 289 DAEKLMEEMAH-KGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
L + + KA E E + G PD +Y+++L A + +
Sbjct: 348 LHAFCKQKKIHKAMEFVE-----------LMVSRGC--YPDIVSYNTLLTALCRNGEVDV 394
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
+ + GC + ++ ++AGK D + G P + ++ +
Sbjct: 395 AIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454
Query: 616 QAIVQSNYEKAV 627
+ E+AV
Sbjct: 455 GLCREDRIEEAV 466
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 132/345 (38%), Gaps = 24/345 (6%)
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
PS A G ++ + + R +A SG + + Y +V + G+++ A
Sbjct: 99 PSPAAVGPCAALIKKLCASGRTADARRVLAASGPDV--MVYNAMVAGYCGAGQLDAARRL 156
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
V +M V A Y L LC GR +A+ V+E + R P +T+T L+ ++
Sbjct: 157 VADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR-RGCLPDVVTYTILLEATC 212
Query: 467 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
+ + M D C P+I T N +L + A E + N Y
Sbjct: 213 KRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLK-----NLPSYG- 266
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+P+ +Y+ +L+ TA +WE E + + MA GC + L+ R
Sbjct: 267 -------CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRR 319
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM----AYAPFHIT 641
G + + + G P+ L + +L Q KA+ + M Y
Sbjct: 320 GLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSY 379
Query: 642 ERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 686
T L + E ++ + L +L + C+ S + L++A
Sbjct: 380 NTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKA 424
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 179/455 (39%), Gaps = 49/455 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL-----GQVGLL----- 280
Y L+ L +AGR EA+ +F M + PD+ Y ++ L G+ GLL
Sbjct: 226 YATLIEGLCEAGRIDEAVELFGEMDQ-----PDMHMYAALVKGLCNAERGEEGLLMLRRM 280
Query: 281 KEL---------VKLIE-RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
KEL +++ R R++ +K + M ++ ++ L P +V AV+NA +
Sbjct: 281 KELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRM 340
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
V + ++ G KP+ TY ++ GK KM G A+TY +L
Sbjct: 341 SDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLL 400
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+R +G I A +R ME G++ Y L LC +GR A + + +++ R
Sbjct: 401 IRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET-RG 459
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML----KVYSRNDMF 505
KP +TF LI G D + M C P+ T ++ + K+ +
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519
Query: 506 SKAKELFEETTRANSSGYTFLS----------------GD--GAPLKPDEYTYSSMLEAS 547
S E+ ++ + ++ YT + G+ + PD TY++ + A
Sbjct: 520 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 579
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ E V M+ +G +D + L+ + G+ + +P+
Sbjct: 580 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 639
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE 642
+ +L + E + L A + +T+
Sbjct: 640 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTD 674
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 131/346 (37%), Gaps = 53/346 (15%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P YNAV+ + + +SG +P A T+ + ++ + D+ +
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F KM G A ++Y L+ E G+I+EAV M+Q + +Y L LCN
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDM----HMYAALVKGLCN 266
Query: 432 NGRWQDAMLVVEKIKSL-------------------RHSK---------------PLEIT 457
R ++ +L++ ++K L R +K P +T
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326
Query: 458 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
T +I + G + D + + + MK C+PN+ T NA+++ + KA L +
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
+ PD TY+ ++ E + + M G DQ +
Sbjct: 387 ACG-------------VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYN 433
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
L+ + G+ FDSL G P+ + F LI + +S
Sbjct: 434 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS-LINGLCKSG 478
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 166/406 (40%), Gaps = 55/406 (13%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ ++ Y L+ L K GR +A +F+ LE + P+ ++S+ L + G
Sbjct: 426 IADQYTYNALINALCKDGRTDQACSLFD-SLETRGIKPNAVTFNSLINGLCKSGKADIAW 484
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL-NACVPSHQWKGVFWVFKQLRKS 343
K +E+M PD Y++ + + C +G+ ++ + L+K
Sbjct: 485 KFLEKMVSAGCT---------------PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 529
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
+KPS Y + + +L+ Y LV + +M SG +TY +RA+ EG++NEA
Sbjct: 530 -VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 588
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ M + GV Y L + G+ A+ +++++ S+ S P + T+ L+
Sbjct: 589 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV-ASVPNQFTYFILLR 647
Query: 464 SSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ ++D + + T + K D+F + + NS Y
Sbjct: 648 HLVRMRLVEDVLPL-------------TPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 694
Query: 524 T-FLSGDGAPLKPDEYT--YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
+ L G + +E T S M E S + + E +Y + C+ + AW+LV
Sbjct: 695 SSILEGFSEDGRTEEATSLVSLMKEDSISLN-----EDIYTALVTCFCKSKRYLDAWVLV 749
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
C +++H G IP + + +L I + +KA
Sbjct: 750 -------CSMIQH--------GFIPQLMSYQHLLSGLICEGQTDKA 780
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 132/380 (34%), Gaps = 81/380 (21%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTK 233
++ +R+M GL+ + L+ L G QA S+ D + + R +K V +
Sbjct: 414 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL----ETRGIKPNAVTFNS 469
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ L K+G+ A + M+ PD Y S L ++ +E + I M QK
Sbjct: 470 LINGLCKSGKADIAWKFLEKMVS-AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 528
Query: 294 ---PS-------------KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQWKGV 333
PS +R + + W ++ PD+V Y + A +
Sbjct: 529 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 588
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR- 392
V ++ K+G+ Y M+ G+ D ++M TY +L+R
Sbjct: 589 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRH 648
Query: 393 ---------------------------------------------------AFWEEGKIN 401
F E+G+
Sbjct: 649 LVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTE 708
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTG 460
EA + V M++ + +Y L C C + R+ DA ++V + ++H P +++
Sbjct: 709 EATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSM--IQHGFIPQLMSYQH 766
Query: 461 LIISSMDGGHIDDCISIFQH 480
L+ + G D IF +
Sbjct: 767 LLSGLICEGQTDKAKEIFMN 786
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 166/457 (36%), Gaps = 100/457 (21%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L KAGR +AL +LE PD Y+ + L + L +E + +++RMR
Sbjct: 250 LCKAGRCGDALS----LLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCI- 304
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
P++V Y +L+ C+ Q + + G P+ + +
Sbjct: 305 --------------PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVH 350
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV-------------------------- 391
+S Y ++ F+KM K G G L Y + +
Sbjct: 351 AYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEML 410
Query: 392 ---------------RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
R GK ++A + M +G V S Y ++ LC+ + +
Sbjct: 411 DLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVE 470
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 495
A L+ E++K P T+T LI S G I + F M +D+C PN+ T ++
Sbjct: 471 KAFLLFEEMKK-NGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSL 529
Query: 496 LKVYSRNDMFSKAKELFE----ETTRANSSGYT--------------------------- 524
+ Y + A +LFE E ++ N YT
Sbjct: 530 IHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIE 589
Query: 525 -------FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
F D P+ TY ++++ A++ E + M+++GC+ +Q +
Sbjct: 590 SSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDA 649
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
L+ + GK + F + E G P+ ++ ++
Sbjct: 650 LIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLI 686
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 132/287 (45%), Gaps = 4/287 (1%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ KA + +A ++F +ML + P++ Y ++ + G + + ++ R
Sbjct: 525 TYTSLIHAYLKARKVFDANKLFEMMLLE-GSKPNVVTYTALIDGHCKAGQIDKACQIYAR 583
Query: 290 MRQKPSKRIKNMHRKNWDPVLE-PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+ +M+ K D E P+++ Y A+++ +++ + + + +G +P+
Sbjct: 584 MQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPN 643
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
Y ++ ++GK + E F KM++ G TY L+ + ++E +++ + +
Sbjct: 644 QIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLS 703
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M + +Y ++ LC G+ ++A ++ K++ + P IT+T +I
Sbjct: 704 KMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEV-GCYPNVITYTAMIDGFGKI 762
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G I+ C+ +++ M C PN T ++ + +A L +E
Sbjct: 763 GKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDE 809
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 147/348 (42%), Gaps = 31/348 (8%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N ++ C + W +L+ G K S TY ++V L++ K D R+M+
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
SG + T + + G+ +A++ +E+ V Y + LC +Q+
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSL---LEKEEFVPDTVFYNRMVSGLCEASLFQE 290
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNIGTVNAML 496
AM ++++++S+ P +T+ L+ + G + C I M + C PN N+++
Sbjct: 291 AMDILDRMRSI-SCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLV 349
Query: 497 KVYSRNDMFSKAKELFEETTRANSS-GYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWE 554
Y ++ +S A +LF++ + GY + G+ +E S +LE + A
Sbjct: 350 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKA---- 405
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK-----CHLLEHAF---DS--------L 598
Y E + G+ L+ +++ + A L A + K C ++ F DS L
Sbjct: 406 YSEMLDLGVVLN--KVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFL 463
Query: 599 LEAGEIPHP-LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 645
+A ++ L F EM IV S Y + LI++ A R W
Sbjct: 464 CDASKVEKAFLLFEEMKKNGIVPSVYTYTI-LIDSFCKAGLIQQARNW 510
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/465 (19%), Positives = 183/465 (39%), Gaps = 65/465 (13%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA-ILGKAGRPHEALRIFNL 253
+++ GL + +++AM +LD ++ + + Y LL+ LGK G+ RI ++
Sbjct: 277 RMVSGLCEASLFQEAMDILDR---MRSISCIPNVVTYRILLSGCLGK-GQLGRCKRILSM 332
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVKL---------------IERMR 291
M+ + YP+ ++S+ + L K+++K I
Sbjct: 333 MMTE-GCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNE 391
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLV-----VYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ P + + K + +L+ +V V N C + ++ F + ++ G
Sbjct: 392 ELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLC-GAGKFDKAFEIICEMMSKGFV 450
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P +TY + + + K + F +M K+G TY +L+ +F + G I +A
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M + Y L + DA + E + L SKP +T+T LI
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMML-LEGSKPNVVTYTALIDGHC 569
Query: 467 DGGHIDDCISIFQHMK----------------DHCE-PNIGTVNAMLKVYSRNDMFSKAK 509
G ID I+ M+ + CE PNI T A++ + + +A
Sbjct: 570 KAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAH 629
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
EL + +S +G +P++ Y ++++ + E + V+ M+ G
Sbjct: 630 ELLDT-----------MSVNGC--EPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYC 676
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ ++ L+ + + L+ +LE P+ + +T+M+
Sbjct: 677 PNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMI 721
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 139/354 (39%), Gaps = 38/354 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y+ V+ + + + F +F++++K+G+ PS TY + ++ ++G +
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M + +TY L+ A+ + K+ +A M G Y L C
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCK 570
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLE---------------ITFTGLIISSMDGGHIDDCIS 476
G+ A + +++ S ++ IT+ L+ +++
Sbjct: 571 AGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHE 630
Query: 477 IFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ M + CEPN +A++ + + A+E+F + + GY P
Sbjct: 631 LLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVF---VKMSERGYC----------P 677
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
+ YTYSS++ + + + V M + C + + ++ + GK E A+
Sbjct: 678 NLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGK---TEEAY 734
Query: 596 DSLL---EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA---YAPFHITER 643
+L E G P+ + +T M+ E+ + L M AP IT R
Sbjct: 735 RLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYR 788
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 211 SVLDWVYGLKDKR-DLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYH 268
S +D + L D + + Y L+ L KA R EA + + M + C P+ Y
Sbjct: 591 SDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCE--PNQIVYD 648
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ + G L+ ++ +M ++ P+L Y++++N+
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYC---------------PNLYTYSSLINSLFKEK 693
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ V V ++ ++ P+ Y ++ + + GK + + KM + G +TY
Sbjct: 694 RLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYT 753
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
++ F + GKI + + R+M +G Y L C+ G +A +++++K
Sbjct: 754 AMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMK 811
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 214/506 (42%), Gaps = 59/506 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K L GS R++ L+ V +++K + YT L+ L + +A + ML
Sbjct: 329 LIKALC--GSERKS-EALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQML 385
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKPSKR-----IKNMHRKN-- 305
E L P++ Y+++ + G++++ +V+L+E +P+ R IK ++N
Sbjct: 386 EK-GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVH 444
Query: 306 -----WDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+ +LE PD+V YN++++ S + + + + GL P TY +
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMI 504
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ + +S + + + F + + + Y L+ + + GK+NEA + M + +
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCL 564
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
+ + L LC +G+ ++A L+ EK+ + +P T T LI + G D
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKI-DLQPTVSTDTILIHRLLKDGDFDHAYR 623
Query: 477 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
FQ M +P+ T ++ Y R A+++ + S P
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVS-------------P 670
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL-LVEASRAGKCHLLEHA 594
D +TYSS+++ + V K M +GC+ Q H +L L++ HLLE
Sbjct: 671 DLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQ--HTFLSLIK-------HLLEMK 721
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV---ALINAMAYAPFHI------TERQW 645
+ ++ GE P + M+ IV EK V NA +Y + R
Sbjct: 722 YGK-VKGGE-PGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVA 779
Query: 646 TELFESNEDRISRDKLEKLLNALCNC 671
++F+ + + E + NAL +C
Sbjct: 780 EKVFDHMQQKEGISPSELVFNALLSC 805
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 160/393 (40%), Gaps = 44/393 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y K++ K G EA + ++++E L PD Y S+ + Q L K+ +
Sbjct: 219 YTYNKMVNGYCKVGNVEEANQYVSMIVE-AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFK 277
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M K +R + V Y +++ + +F +++ P+
Sbjct: 278 EMPLKGCRR---------------NEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPT 322
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + ++ + S + ++M + G TY VL+ + + K+ +A +
Sbjct: 323 VRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLG 382
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M ++G++ Y L C G +DA+ VVE ++S R+ +P T+ LI
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMES-RNLRPNTRTYNELI------ 435
Query: 469 GHIDDCISIFQHMKDHCEPNI----GTVNAMLKVYSRNDMFSKAKELFEETTRANS--SG 522
K +C+ N+ G +N ML+ D+ + L + R+ + S
Sbjct: 436 -------------KGYCKRNVHKAMGVLNKMLERKVLPDVVT-YNSLIDGQCRSGNFDSA 481
Query: 523 YTFLS-GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
Y LS + L PD +TY+SM+++ + + E ++ + + + L+
Sbjct: 482 YRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDG 541
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+AGK + + +L +P+ L F ++
Sbjct: 542 YCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALI 574
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 96/523 (18%), Positives = 192/523 (36%), Gaps = 72/523 (13%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+ A++ W+ ++ R S + Y LL +L G +I LM++ C+
Sbjct: 104 KTALNFSHWIS--QNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCD------- 154
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV--YNAVLNAC 324
SVA TL ++ L +M + S +K L++ YN +LN+
Sbjct: 155 --SVADTLF-------VLDLCRKMNKDESFELKY------------KLIIGCYNTLLNSL 193
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ V+ ++ + + P+ TY + + G + +++ + ++G
Sbjct: 194 ARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDF 253
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
TY L+ + + ++ A + M +G Y L LC R +AM + K
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVK 313
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 503
+K P T+T LI + + +++ + M++ +PNI T ++
Sbjct: 314 MKD-DDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQC 372
Query: 504 MFSKAKEL----FEETTRANSSGYTFLSG------------------DGAPLKPDEYTYS 541
KA+EL E+ N Y L + L+P+ TY+
Sbjct: 373 KLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYN 432
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQL------DQTKHAWLLVEASRAGKCHLLEHAF 595
+++ + V+K M + L D + L+ R+G
Sbjct: 433 ELIKGYCKRN-------VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 655
+ + G +P P +T M+ E+A L +++ +T L +
Sbjct: 486 SLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545
Query: 656 ISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
++ +L + + N + +T + L +H LC K ++
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNSLTFNAL---IHGLCTDGKLKE 585
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 102/487 (20%), Positives = 192/487 (39%), Gaps = 46/487 (9%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
F E ++KLL G + +++ L+ L +K + TKL+ +A
Sbjct: 66 FRETHLMKLLNRSCKAGKFNESLYFLEC---LVNKGYTPDVILCTKLIKGFFNFKNIEKA 122
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-------------- 293
R+ ++ + + PD+ AY++V +V ++ +++ RM+ +
Sbjct: 123 SRVMEIL--ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIG 180
Query: 294 --PSKRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
++R + K D +L P ++ Y ++ A + + +++ GL P
Sbjct: 181 SLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 240
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + M + G + E + G ++Y +L+RAF +GK +E V
Sbjct: 241 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLV 300
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M RG Y L LC GR +A+ V+ K+ + P ++ LI +
Sbjct: 301 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVL-KVMIEKELTPDTYSYDPLISALCK 359
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +D I I +M + C P+I N +L +N ++A E+F + L
Sbjct: 360 EGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNK-----------L 408
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
G G P P+ +Y++M+ A + + M G D+ + L+ R G
Sbjct: 409 RGMGCP--PNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDG 466
Query: 587 KCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
L+E A D + ++G P + + +L+ + A+ + M E
Sbjct: 467 ---LVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNET 523
Query: 644 QWTELFE 650
+ L E
Sbjct: 524 TYILLIE 530
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 152/390 (38%), Gaps = 20/390 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD+ YNAV++ ++ + V +++ G P TY + + + K L +
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
++ +TY +L+ A EG INEA+ + M RG++ Y + +C
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
G + A ++ + S + KP I++ L+ + ++ G D+ + M CEPN
Sbjct: 254 KEGMVERAAELITSLTS-KGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T + ++ R +A + + L PD Y+Y ++ A
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKE-------------LTPDTYSYDPLISALCK 359
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + + M +GC D + +L + G + F+ L G P+
Sbjct: 360 EGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSS 419
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL-EKLLNAL 668
+ M+ + +A+ ++ AM E + L + RD L E+ + L
Sbjct: 420 YNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISC----LCRDGLVEEAIGLL 475
Query: 669 CNCNAASSEITVSNLSRALHALCRSEKERD 698
+ + TV + + L LC+ + D
Sbjct: 476 DDMEQSGFRPTVISYNIVLLGLCKVRRIDD 505
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 93/221 (42%), Gaps = 19/221 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L +G A+ ++D++ D+ + Y +LA L K G ++AL IFN L
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVN---YNTILAALCKNGNANQALEIFN-KL 408
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P++++Y+++ L G + ++ M K ++PD +
Sbjct: 409 RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG---------------VDPDEI 453
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN++++ + + + +SG +P+ +Y + + + + + D F +M
Sbjct: 454 TYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEM 513
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ G TY +L+ G EA+ ++ R V+
Sbjct: 514 IEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 179/423 (42%), Gaps = 44/423 (10%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y LL L + G+ A+ +F ML+ D+ +++ + L + G ++ ++
Sbjct: 44 SMVTYNTLLDGLFRTGKLERAMALFQEMLD--RRSHDVISFNILVTGLCRAGKIETALEF 101
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+M + S P+++ Y+ +++ +++ + + ++ G
Sbjct: 102 FRKMDDRCS----------------PNVITYSVLIDGLCKANRVSQAVELLESMKARGCS 145
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P TY + ++ + + K E R+M +G +TY L+ ++++A+A
Sbjct: 146 PDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 205
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+R+M RG Y L LC GR +DA ++ + + P + + LI
Sbjct: 206 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID-KGGTPDLMIYNMLINGLC 264
Query: 467 DGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
+D+ I++ + + +P++ T ++++ R++ +A L +
Sbjct: 265 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL-----------LY 313
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL---LVEA 582
+ G P PD YS++++ A + + +Y+ M GC D ++ L L +A
Sbjct: 314 VKSRGCP--PDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKA 371
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAMA---YAPF 638
R + HLL ++ G P + + LI+ + N+ ++A+ L+ M AP
Sbjct: 372 GRVDEAHLL---LARMVRMGTPPSTMTYNS-LIKGLCDLNHLDEAIELVEEMERSNCAPS 427
Query: 639 HIT 641
+T
Sbjct: 428 AVT 430
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 147/395 (37%), Gaps = 82/395 (20%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LVD L + A W+ +R M +G + LL GL A++++
Sbjct: 153 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM------ 206
Query: 220 KDKRDLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
RD+ R Y L+ L K GR +A + M++ PD+ Y+ +
Sbjct: 207 ---RDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK-GGTPDLMIYNMLING 262
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + + E + L +R+ S IK PD+V Y++V+ S++
Sbjct: 263 LCKADQVDESIAL---LRRAVSGGIK------------PDVVTYSSVIYGLCRSNRLDEA 307
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ ++ G P Y ++ + ++GK D + + M G +TY L+
Sbjct: 308 CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDG 367
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ G+++EA + M + G + P
Sbjct: 368 LCKAGRVDEAHLLLARMVRMG------------------------------------TPP 391
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF-SKAKEL 511
+T+ LI D H+D+ I + + M + +C P+ T N ++ R + S A +
Sbjct: 392 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDY 451
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
F+E + PD TYS +LE
Sbjct: 452 FQEMIDNG-------------VIPDHITYSILLEG 473
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 21/239 (8%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EP++V YN++++ +++ +F+ ++ PS TY ++ + ++GK +
Sbjct: 7 EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 66
Query: 371 FFRKMA--KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
F++M +S + I ++ +LV GKI A+ R M+ R + Y L
Sbjct: 67 LFQEMLDRRSHDVI---SFNILVTGLCRAGKIETALEFFRKMDDRCSPNVIT-YSVLIDG 122
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
LC R A+ ++E +K+ R P IT+T L+ + + + M D C P
Sbjct: 123 LCKANRVSQAVELLESMKA-RGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
N+ T N++L R S A L + T G T P+ TY ++++
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMT---CRGCT----------PNVVTYGTLIDG 227
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 115/315 (36%), Gaps = 63/315 (20%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+R G +P+ TY ++ + ++ + D E F M + +TY L+ + GK
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ A+A + M R R D I+F
Sbjct: 61 LERAMALFQEMLDR--------------------RSHDV-----------------ISFN 83
Query: 460 GLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L+ G I+ + F+ M D C PN+ T + ++ + + S+A EL E
Sbjct: 84 ILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 143
Query: 520 SS----GYTFLSGDG-------------------APLKPDEYTYSSMLEASATAHQWEYF 556
S YT L DG A P+ TY+S+L A +
Sbjct: 144 CSPDVITYTILV-DGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 202
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
+ + M GC + + L+ + G+ +++ G P + + MLI
Sbjct: 203 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY-NMLIN 261
Query: 617 AIVQSN-YEKAVALI 630
+ +++ ++++AL+
Sbjct: 262 GLCKADQVDESIALL 276
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 153/431 (35%), Gaps = 102/431 (23%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K G+ EAL ++E N PD Y + L + L +E + + RMR
Sbjct: 239 LCKVGKWREALT----LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL- 293
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
P++V Y+ +L C+ Q V + G PS + +
Sbjct: 294 --------------PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV-------------------------- 391
SG + ++ +KM K G G + Y +L+
Sbjct: 340 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEML 399
Query: 392 ---------------RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
R GK +A + +R M +G + S Y ++ LCN + +
Sbjct: 400 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 459
Query: 437 DAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
A L+ E++K R ++ T+T ++ S G I+ F M++ C PN+ T A
Sbjct: 460 LAFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 517
Query: 495 MLKVYSRNDMFSKAKELFE----ETTRANSSGYT-------------------------- 524
++ Y + S A ELFE E N Y+
Sbjct: 518 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 577
Query: 525 --------FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
F D +P+ TY ++L+ +H+ E + M++ GC+ +Q +
Sbjct: 578 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 637
Query: 577 WLLVEASRAGK 587
L+ + GK
Sbjct: 638 ALIDGLCKVGK 648
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/351 (19%), Positives = 138/351 (39%), Gaps = 32/351 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y+ VLN + + + F +F+++++ GL TY + ++ ++G + ++
Sbjct: 440 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 499
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M + G +TY L+ A+ + K++ A M G + Y L C
Sbjct: 500 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 559
Query: 432 NGRWQDAMLVVEKIKSLR---------------HSKPLEITFTGLIISSMDGGHIDDCIS 476
G+ + A + E++ + +P +T+ L+ +++
Sbjct: 560 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 619
Query: 477 IFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ M + CEPN +A++ + +A+E+ E +S G P
Sbjct: 620 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE-----------MSEHGFP--A 666
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
YTYSS+++ + + V M + C + + ++ + GK
Sbjct: 667 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 726
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITER 643
+ E G P+ + +T M+ + E + L+ M AP ++T R
Sbjct: 727 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 777
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 22/255 (8%)
Query: 316 VYNAVLNACVPSHQWKGVFWV----FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
V+ LN V H G F + +L+ +PS +TY ++ L++ + D
Sbjct: 157 VFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI 216
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
R+M+ + + T + + + GK EA+ V E V Y +L LC
Sbjct: 217 HREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCE 273
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNIG 490
+++AM + ++++ P +T++ L+ ++ + C + M + C P+
Sbjct: 274 ASLFEEAMDFLNRMRA-TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 332
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRA-NSSGYTF-------LSGDGAPLKPD-----E 537
N+++ Y + S A +L ++ + + GY + GD L D E
Sbjct: 333 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAE 392
Query: 538 YTYSSMLEASATAHQ 552
YS ML A ++
Sbjct: 393 KAYSEMLAAGVVLNK 407
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 31/265 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-------------VYTKLLAILGKAG 242
L+ G G +A + + + G KD D+ F Y LL K+
Sbjct: 553 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 612
Query: 243 RPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
R EA ++ + M +E C P+ Y ++ L +VG L E ++ +K
Sbjct: 613 RVEEARKLLDAMSMEGCE--PNQIVYDALIDGLCKVGKLDE------------AQEVKTE 658
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
++ P L Y+++++ + V ++ ++ P+ Y ++ + +
Sbjct: 659 MSEHGFPA---TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
GK D ++ + M + G +TY ++ F GKI + + M +GV
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775
Query: 422 YYELACCLCNNGRWQDAMLVVEKIK 446
Y L C NG A ++E++K
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMK 800
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 129/279 (46%), Gaps = 14/279 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ +++ + L+P Y + ++ ++GK D+ +FF +M +G + +TY ++
Sbjct: 257 LLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLC 316
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ ++NEAV +M+Q V A Y + G+++DA ++E+ + + P
Sbjct: 317 KADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRR-KGCIPSV 375
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+++ ++ G +D+ + F+ MK PN+ T N M+ DM KA +L ET
Sbjct: 376 VSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMI------DMLCKAGKL--ET 427
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
A L P+ T + M++ A + + +++G+ C+ D +
Sbjct: 428 ALVVRDAM-----KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTY 482
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
L+ R G+ ++ +L+A +IP+ + +T ++
Sbjct: 483 CSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 167/410 (40%), Gaps = 40/410 (9%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
GL K Y L+ LG+ GR EA +++ ML D N P+ Y S+ +
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML-DANQIPNAVVYTSLIRNFFKC 527
Query: 278 GLLKELVKLIERMRQKPSKRIKN-MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G R++ +I N M R PDL++ N ++ + + + +
Sbjct: 528 G------------RKEDGHKIYNEMLRLGC----SPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F++++ G P A +Y + + ++++G +E F M + G + Y ++ F +
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE- 455
GK+N+A + M+ +G T Y + L R +A ++ E+ K SK +E
Sbjct: 632 SGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK----SKGIEL 687
Query: 456 --ITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ ++ LI G ID+ I + M+ PN+ T N +L D KA+E+
Sbjct: 688 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL------DALVKAEEIS 741
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
E F S P+ TYS ++ ++ ++ M G + +
Sbjct: 742 EALV-------CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ ++ ++AG + F+ E G + + +I+ + +N
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA-IIEGLSNAN 843
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 140/337 (41%), Gaps = 26/337 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
LEPD+V+YN ++ + + + F +++ +GL TY + V+ ++ + +
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E F M ++ + A Y ++ + GK +A + + ++G + + Y + CL
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
G+ +A+ E++K + + P T+ +I G ++ + + MKD PN
Sbjct: 386 GRKGQVDEALKKFEEMK--KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGY-TFLSGDGAPLKPDEY--TYS 541
+ TVN M+ + A +FE +T R ++ Y + + G G + DE Y
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503
Query: 542 SMLEASATAHQWEYFEY---------------VYKGMALSGCQLDQTKHAWLLVEASRAG 586
ML+A+ + Y +Y M GC D + +AG
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
+ F + G IP +T +LI +V++ +
Sbjct: 564 EIEKGRALFQEIKNLGFIPDARSYT-ILIHGLVKAGF 599
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 129/296 (43%), Gaps = 20/296 (6%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ L KAG HEA +F M E C L D AY++V + G + + +L+E
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVL--DTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K EP +V Y +V++ + + +F++ + G++ +
Sbjct: 645 MKTKGH---------------EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNV 689
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ + G+ D + ++ + G T+ L+ A + +I+EA+ ++
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQS 749
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M+ Y L LC ++ A + ++++ + KP T+T +I G
Sbjct: 750 MKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK-QGFKPNVFTYTTMISGLAKAG 808
Query: 470 HIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+I + ++F+ K+ + NA+++ S + S A LFEE S YT
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYT 864
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 135/335 (40%), Gaps = 30/335 (8%)
Query: 141 KNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGL 200
KN+ + P+ R + +L+ L + + ++ M + G + ++ G
Sbjct: 576 KNLGFIPDAR------SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629
Query: 201 GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
G +A +L+ +K K + Y ++ L K R EA +F + +
Sbjct: 630 CKSGKVNKAYQLLEE---MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFE-EAKSKGI 685
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
++ Y S+ G+VG + E ++E + QK L P++ +N +
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG---------------LTPNVYTWNCL 730
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
L+A V + + F+ ++ P+ TY + + + + K++ F+++M K G
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
TY ++ + G I EA +++G V +++Y + L N R DA
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ E+ + S +T + +D H +CI
Sbjct: 851 LFEEARLKGCS-----IYTKTCVVLLDSLHKAECI 880
>gi|357112338|ref|XP_003557966.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 538
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 23/348 (6%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSG-LKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+A + +F+ L +G + P A ++ +A++ + G D E +M
Sbjct: 125 YNDILSALARGGDYDSAMALFRALEPNGTVAPDAHSFAIAVQCFCRKGAPDEAKETLDEM 184
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G + +V + G++ A+ + M G T Y L LC GR
Sbjct: 185 LARGYLPTVSAFSAVVGCLCKRGRVTRAMEVLDAMRGVGCEPTIRTYNSLIGGLCYVGRL 244
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
+DA ++ K+K TFT ++ G DD ++IF+ ++ P I T NA
Sbjct: 245 EDARDLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTDDAMAIFEDAVRTGLSPTIFTYNA 304
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS----SMLEASATA 550
+L + + KA L E D PD+ ++S ++L A +
Sbjct: 305 LLNGHCKEGHLLKAYNLLMEMC------------DNETCPPDKISFSIVLPALLRAGEIS 352
Query: 551 HQWEYFEYV-YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
W+ F+ + + G+ G LD A+ + F L+ +G P+
Sbjct: 353 AAWQTFKRMEHAGLEADGRALDTLTRGLCRQCAADISALRDAKEVFGKLVSSGH--EPVS 410
Query: 610 FTEMLI-QAIVQSN-YEKAVALINAMAYAPFHITERQWTELFESNEDR 655
+T L+ QA+ + + AVA+++ MA + + +R +T++ + DR
Sbjct: 411 YTYCLMAQALARGGEVDAAVAILDDMARKGYALRKRAYTDVVRALCDR 458
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 126/304 (41%), Gaps = 42/304 (13%)
Query: 169 EMTAKNW--------KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSV---LDWVY 217
EM A+ + V + + G + ++L ++G+G + + R S+ L +V
Sbjct: 183 EMLARGYLPTVSAFSAVVGCLCKRGRVTRAMEVLDAMRGVGCEPTIRTYNSLIGGLCYVG 242
Query: 218 GLKDKRDLKSR-----------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
L+D RDL ++ + +T +L K GR +A+ IF + L P I
Sbjct: 243 RLEDARDLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTDDAMAIFEDAVRT-GLSPTIFT 301
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+++ + G L + L+ M + PD + ++ VL A +
Sbjct: 302 YNALLNGHCKEGHLLKAYNLLMEMCDNET--------------CPPDKISFSIVLPALLR 347
Query: 327 SHQWKGVFWVFKQLRKSGLKPSA-----ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + + FK++ +GL+ T GL + E F K+ SG
Sbjct: 348 AGEISAAWQTFKRMEHAGLEADGRALDTLTRGLCRQCAADISALRDAKEVFGKLVSSGHE 407
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+ TY ++ +A G+++ AVA + +M ++G Y ++ LC+ R +A+ V
Sbjct: 408 PVSYTYCLMAQALARGGEVDAAVAILDDMARKGYALRKRAYTDVVRALCDRSRTSEAVRV 467
Query: 442 VEKI 445
+ +
Sbjct: 468 LAVV 471
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 153/431 (35%), Gaps = 102/431 (23%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K G+ EAL ++E N PD Y + L + L +E + + RMR
Sbjct: 280 LCKVGKWREALT----LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL- 334
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
P++V Y+ +L C+ Q V + G PS + +
Sbjct: 335 --------------PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV-------------------------- 391
SG + ++ +KM K G G + Y +L+
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 392 ---------------RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
R GK +A + +R M +G + S Y ++ LCN + +
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 437 DAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
A L+ E++K R ++ T+T ++ S G I+ F M++ C PN+ T A
Sbjct: 501 LAFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 495 MLKVYSRNDMFSKAKELFE----ETTRANSSGYT-------------------------- 524
++ Y + S A ELFE E N Y+
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 525 --------FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
F D +P+ TY ++L+ +H+ E + M++ GC+ +Q +
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 577 WLLVEASRAGK 587
L+ + GK
Sbjct: 679 ALIDGLCKVGK 689
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/351 (19%), Positives = 138/351 (39%), Gaps = 32/351 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y+ VLN + + + F +F+++++ GL TY + ++ ++G + ++
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M + G +TY L+ A+ + K++ A M G + Y L C
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 432 NGRWQDAMLVVEKIKSLR---------------HSKPLEITFTGLIISSMDGGHIDDCIS 476
G+ + A + E++ + +P +T+ L+ +++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 477 IFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ M + CEPN +A++ + +A+E+ E +S G P
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE-----------MSEHGFP--A 707
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
YTYSS+++ + + V M + C + + ++ + GK
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITER 643
+ E G P+ + +T M+ + E + L+ M AP ++T R
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 22/255 (8%)
Query: 316 VYNAVLNACVPSHQWKGVFWV----FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
V+ LN V H G F + +L+ +PS +TY ++ L++ + D
Sbjct: 198 VFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI 257
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
R+M+ + + T + + + GK EA+ V E V Y +L LC
Sbjct: 258 HREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCE 314
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNIG 490
+++AM + ++++ P +T++ L+ ++ + C + M + C P+
Sbjct: 315 ASLFEEAMDFLNRMRA-TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 373
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRA-NSSGYTF-------LSGDGAPLKPD-----E 537
N+++ Y + S A +L ++ + + GY + GD L D E
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 538 YTYSSMLEASATAHQ 552
YS ML A ++
Sbjct: 434 KAYSEMLAAGVVLNK 448
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 31/265 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-------------VYTKLLAILGKAG 242
L+ G G +A + + + G KD D+ F Y LL K+
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 243 RPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
R EA ++ + M +E C P+ Y ++ L +VG L E ++ +K
Sbjct: 654 RVEEARKLLDAMSMEGCE--PNQIVYDALIDGLCKVGKLDE------------AQEVKTE 699
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
++ P L Y+++++ + V ++ ++ P+ Y ++ + +
Sbjct: 700 MSEHGFPA---TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
GK D ++ + M + G +TY ++ F GKI + + M +GV
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 422 YYELACCLCNNGRWQDAMLVVEKIK 446
Y L C NG A ++E++K
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMK 841
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 158/373 (42%), Gaps = 72/373 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT+L+ LGKAGR EA + ML D L PD+ +++ LG+VG ++EL +
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFS 362
Query: 289 RM---RQKPSKRIKNMHRK-------------NWDPVLEPDLV-----VYNAVLNACVPS 327
M R P+ N K +W ++ D V Y+ +++ +
Sbjct: 363 EMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT 422
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + + +++ + G P A Y + + ++ +Y+ E F+++ ++ + + Y
Sbjct: 423 NRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVY 482
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
V+++ F + GK++EAV M+ +G
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQG--------------------------------- 509
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
S P + L+ + G I++ S+ + M+++ C +I + N +L ++R +
Sbjct: 510 ---SGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+A E+FE + +KPD TY+++L A A +E + + M
Sbjct: 567 RAIEMFETIKHSG-------------IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Query: 567 GCQLDQTKHAWLL 579
G + D ++ +L
Sbjct: 614 GFEYDAITYSSIL 626
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/567 (16%), Positives = 226/567 (39%), Gaps = 83/567 (14%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSG 185
+D ++ + +F +W ++R ++ + L+ L E + + ++ ++ ++ +
Sbjct: 102 IDVEINVKIQFF----KWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTY 157
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
+ + + +L+K LG +A+SV Y K ++ + Y ++ +L + G+
Sbjct: 158 VSVSPAVLSELVKALGRAKMVSKALSVF---YQAKGRKCKPTSSTYNSVILMLMQEGQHE 214
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+ ++ M + + +PD Y ++ + ++G ++L + M+
Sbjct: 215 KVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK-------------- 260
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
D ++P +Y +L + + +F++++++G P+ TY ++ + ++G+
Sbjct: 261 -DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 366 DLVHEFFRKMAKSG------------EAIG-----------------------ALTYKVL 390
D + F++ M + G +G ++Y +
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTV 379
Query: 391 VRAFWE-EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
++A +E + ++E + M+ V + Y L C R + A+L++E++ +
Sbjct: 380 IKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE-K 438
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-----MLKVYSRNDM 504
P + LI + + +F+ +K+ N G V++ M+K + +
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAADELFKELKE----NFGNVSSRVYAVMIKHFGKCGK 494
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
S+A +LF E S PD Y Y++++ A + + M
Sbjct: 495 LSEAVDLFNEMKNQGSG-------------PDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 624
+GC+ D H +L +R G F+++ +G P + + +L +E
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 625 KAVALINAMAYAPFHITERQWTELFES 651
+A ++ M F ++ + ++
Sbjct: 602 EAARMMREMKDKGFEYDAITYSSILDA 628
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 158/371 (42%), Gaps = 38/371 (10%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK-L 234
+F+R M + +G + L+ GL +G A+ + W L+ + + V T L
Sbjct: 509 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL--WFRLLE--KGFGANLVTTNAL 564
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K G EA+R+ MLE D Y+++ + G ++E KL M ++
Sbjct: 565 IHGLCKTGNMQEAVRLLKKMLER-GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+EPD YN +++ + ++ + + L P+ TYG+
Sbjct: 624 ---------------IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ ++ K + + F ++ + ++ Y L+RA+ G EA +M +G
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 728
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ T + Y L +CN GR +DA ++++++ P + +T LI G +D
Sbjct: 729 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRK-EGLLPNVVCYTALIGGYCKLGQMDKV 787
Query: 475 ISIFQHMKDH-CEPNIGTVNAMLKVYSRN-DMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+++ Q M + PN T M+ YS++ DM + AK L E G
Sbjct: 788 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV--------------GKG 833
Query: 533 LKPDEYTYSSM 543
+ PD TY+ +
Sbjct: 834 IVPDTVTYNVL 844
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 103/553 (18%), Positives = 215/553 (38%), Gaps = 47/553 (8%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++F M + G+ T L+ GL + +A SVL +K + VY L
Sbjct: 368 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETL---EKGFTPNEVVYNTL 424
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ K G +ALRI M+ + P+ +S+ ++G +++ ++E M +
Sbjct: 425 IDGYCKMGNLGDALRIRGDMVSK-GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ P + +++ + +++ +++ ++P+
Sbjct: 484 FS-------------INPG--AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 528
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + + GK+ E + ++ + G +T L+ + G + EAV ++ M +RG
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588
Query: 415 VVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
V Y L C G+ ++ L E +K + +P T+ LI G +D+
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK--QGIEPDTFTYNLLIHGMCRIGKLDE 646
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
++++ K PN+ T M+ Y + D + ++LF E N
Sbjct: 647 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN------------- 693
Query: 533 LKPDEYTYSSMLEASA-TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L+ + Y++++ A + E F+ ++ M G ++ L+ G+
Sbjct: 694 LELNSVVYNTLIRAYCRNGNTVEAFK-LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 752
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+ D + + G +P+ + +T ++ +K V ++ M+ H + +T + +
Sbjct: 753 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 812
Query: 652 NEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK--ERDLSSSAHFGSQA 709
KLL+ + +T + L+ + C+ K E L + G
Sbjct: 813 YSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLT---NGFCKEGKIEEGKLLAEDGVGFN- 868
Query: 710 IDISPLHGIHEAF 722
SPL IHEAF
Sbjct: 869 ---SPLFLIHEAF 878
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 6/224 (2%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD+ +++ +NA + + +F + K G+ P+ TY + + + G D
Sbjct: 309 VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAF 368
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F KM K G +TY VL+ + K NEA + ++ ++G VY L
Sbjct: 369 RFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGY 428
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C G DA+ + + S + P +T +I G ++ I + M N
Sbjct: 429 CKMGNLGDALRIRGDMVS-KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSIN 487
Query: 489 IGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTFLSG 528
G ++ N F A +E+ R N T L G
Sbjct: 488 PGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 531
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P + +L++ V +++ + +WVF+ +R+ G+ P + A+ + GK + +
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 335
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F M K G + +TY L+ + G ++EA M + GV T Y L L
Sbjct: 336 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 395
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
++ +A V+++ + P E+ + LI G++ D + I M PN
Sbjct: 396 LEKFNEANSVLKETLE-KGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 454
Query: 491 TVNAMLKVYSRNDMFSKAKELFEE 514
T+N++++ + + +A+ + EE
Sbjct: 455 TLNSIIQGFCKIGQMEQAECILEE 478
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/447 (19%), Positives = 179/447 (40%), Gaps = 40/447 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KGL G + A+ V G K D+ + L+ L K+GR EA +IF M
Sbjct: 71 VIKGLCKAGRFGDALGYFKTVAGTKCTPDI---ITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P++ Y +V L + G L ++L++ M + P+++
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCC---------------PNVI 172
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ ++ + + F + +++ + G +P Y + + +S + D E + M
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+SG +TY L+ F +++ A ++ M +RG Y + LC + R
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID------DCISIFQHMKDH-CEPN 488
DA +++++ + R P IT++ +I +D I + MK C PN
Sbjct: 293 DDAQALLKQMVAAR-CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
GT +++ R +A L + + PD ++S ++ +
Sbjct: 352 AGTYAVVIEGLCRARKSQQALALLRRMIDSE-------------VVPDLSSFSMVIGSLC 398
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+H + ++ M+ C+ + +A L+ S+ G+ F+ ++E+ P
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR-PGVA 457
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAY 635
+ +L E+AV ++ M +
Sbjct: 458 TYNSVLDGLCGVGRIEEAVRMVEGMIH 484
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 139/331 (41%), Gaps = 34/331 (10%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+++R + + F Y L+ L KAG+ +A + + M D + P +A ++ V L + G
Sbjct: 21 FREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEM-RDRGIPPGVAVHNGVIKGLCKAG 79
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ + + + PD++ +N +++A V S + + F +F+
Sbjct: 80 RFGDALGYFKTVAGTKCT---------------PDIITFNILVDALVKSGRVEEAFQIFE 124
Query: 339 QLRKSG-LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+ S P+ TY + + + GK D E M ++G +TY VLV +
Sbjct: 125 SMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE-KIKSLRHSKPLEI 456
G+ ++ ++ M +RG +Y L LC + R +A+ +V+ I+S P +
Sbjct: 185 GRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS--GCYPTVV 242
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ L+ +D + Q M + C P++ N ++ R+ A+ L ++
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
A PD TYS++++
Sbjct: 303 VAARCV-------------PDVITYSTIIDG 320
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 170/445 (38%), Gaps = 41/445 (9%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N LN V + Q +F++ R P+ TYG + + ++GK D +E +M
Sbjct: 2 NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
G G + +++ + G+ +A+ + + + L L +GR ++
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 496
A + E + + P +T+T +I G +D I + M + C PN+ T + ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
+ + K L +E TR +PD Y+++L + + +
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRG-------------FQPDVIMYNTLLNGLCKSRRLDEA 225
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
+ + M SGC + L+ R+ + + E G P + + ++
Sbjct: 226 LELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285
Query: 617 AIVQSNYEKAVALINAMAYA---PFHITERQWTELFESNEDRISRD-KLEKLLNAL---- 668
+ + A AL+ M A P IT + + R+ D KLE L
Sbjct: 286 LCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL-CKDWRVDADWKLEAACEILEMMK 344
Query: 669 ---CNCNAASSEITVSNLSRA---------LHALCRSEKERDLSS-SAHFGS--QAIDIS 713
C NA + + + L RA L + SE DLSS S GS ++ D+
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404
Query: 714 PLHGIHEAFDVKETENVPSSSASMM 738
+ I +E + P + A+++
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALI 429
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/305 (16%), Positives = 126/305 (41%), Gaps = 16/305 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ Y ++++ + + + + ++R G+ P A + ++ + ++G++ +
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG-VVGTASVYYELACCLC 430
F+ +A + +T+ +LV A + G++ EA +M + Y + LC
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
+G+ A+ +++ + P IT++ L+ G D ++ Q M + +P++
Sbjct: 148 KDGKLDRAIELLDLMNE-TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
N +L ++ +A EL + R+ P TY+S++E
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCY-------------PTVVTYNSLMELFCR 253
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ Q + + + M+ GC D + ++ R + + ++ A +P +
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313
Query: 610 FTEML 614
++ ++
Sbjct: 314 YSTII 318
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 30/251 (11%)
Query: 161 LVDRLSEREMTAKNWKF------VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
++D L + +WK + +M Q+G G +++GL +QA+++L
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVT 273
+ + DL S ++ ++ L K+ A +IF +M E +C P+ AY ++
Sbjct: 377 RMIDSEVVPDLSS---FSMVIGSLCKSHDLDAAYKIFGMMSERECK--PNPVAYAALIDG 431
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKG 332
L + G + + V++ E M + P + YN+VL+ C +
Sbjct: 432 LSKGGEVDKAVRVFELMVES----------------FRPGVATYNSVLDGLCGVGRIEEA 475
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
V V + K P A+YG + + + + +E F+ + G A+ Y VLV
Sbjct: 476 VRMVEGMIHKECF-PDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534
Query: 393 AFWEEGKINEA 403
++ ++++A
Sbjct: 535 ELCKKKRLSDA 545
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 145/352 (41%), Gaps = 50/352 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G+ +G +A+ + D + G + D+ + Y L+ L K G A+R+ M+
Sbjct: 137 LIRGICVEGKIGEALHLFDKMIGEGFRPDVVT---YGTLINGLCKVGNTSAAIRLLGSMV 193
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N P++ AY+++ +L + + E L M K + PD+
Sbjct: 194 QK-NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG---------------ISPDIF 237
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN++++A +WK V + ++ S + P ++ ++ + + GK H+ KM
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 297
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +TY L+ +++EAV M +G + Y L NG
Sbjct: 298 IQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI-----NGYC 352
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
+ +++I H +T L+ ++D+ + +F M C PN+ + N
Sbjct: 353 K-----IQRIDKAIH-------YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNT 400
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
++ Y + KA LF E R L PD TYS+++
Sbjct: 401 LINGYCKIQRIDKAMYLFGEMCRQE-------------LIPDTVTYSTLIHG 439
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 215 WVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+++G +++L V Y+ L+ L R +A+ +F+ M+ C+ P++ Y
Sbjct: 416 YLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA-CSQIPNLVTYRI---- 470
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
LL L K R + +K + N DP D+ V N ++ + + +
Sbjct: 471 -----LLDYLCK--NRYLAEAMALLKAIEGSNLDP----DIQVNNIAIDGMCRAGELEAA 519
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+F L GL+P TY + + + + G D + FR+M ++G + Y + R
Sbjct: 520 RDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRG 579
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTAS 420
F + + A+ ++ M RG AS
Sbjct: 580 FLRNNETSRAIQLLQEMVARGFSADAS 606
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/323 (18%), Positives = 112/323 (34%), Gaps = 48/323 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P V +N +L + + + Q+ G+ P+ T + + +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G T+ L+R EGKI EA+ M G Y L LC
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
G A+ ++ SM ++ +C+PN+
Sbjct: 179 VGNTSAAI---------------------RLLGSM--------------VQKNCQPNVFA 203
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ ++ ++A LF E S PD +TY+S++ A
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGIS-------------PDIFTYNSLIHALCNLC 250
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+W++ + M S D ++ + GK D +++ G P+ + +T
Sbjct: 251 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYT 310
Query: 612 EMLIQAIVQSNYEKAVALINAMA 634
++ + S ++AV + + M
Sbjct: 311 ALMDGHCLLSEMDEAVKVFDTMV 333
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 16/192 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ K R +A+ +F M L PD Y ++ L V L++ + L M
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQ-ELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 456
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+I P+LV Y +L+ + + K + S L P
Sbjct: 457 --VACSQI-------------PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 501
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+A++ M ++G+ + + F ++ G TY +++ G ++EA R M
Sbjct: 502 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 561
Query: 411 EQRGVVGTASVY 422
++ G +Y
Sbjct: 562 DENGCTLNGCIY 573
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/406 (17%), Positives = 150/406 (36%), Gaps = 22/406 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD + ++ + +F ++ G +P TYG + + + G
Sbjct: 128 QPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 187
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
M + Y ++ + ++ ++ EA M +G+ Y L LC
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247
Query: 431 NNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
N W+ A L+ E + S P ++F ++ + G + + + M + EPN
Sbjct: 248 NLCEWKHVATLLNEMVDS--KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPN 305
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGY-TFLSGDGAPLKPDEYT-YSS 542
+ T A++ + +A ++F+ + N Y T ++G + D+ Y+
Sbjct: 306 VVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTX 365
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
+++ + V+ M GC + + L+ + + + F +
Sbjct: 366 LMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 425
Query: 603 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---PFHITERQWTELFESNEDRISRD 659
IP + ++ ++ + A+AL + M P +T R + N
Sbjct: 426 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 485
Query: 660 KLEKLLNALCNCNAASSEITVSNLSRALHALCRS---EKERDLSSS 702
L K + + +I V+N+ A+ +CR+ E RDL S+
Sbjct: 486 ALLKAIEG----SNLDPDIQVNNI--AIDGMCRAGELEAARDLFSN 525
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/397 (16%), Positives = 149/397 (37%), Gaps = 36/397 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P++ + ++N+ ++ F V ++ K G +P AT+ + + GK
Sbjct: 92 IPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEAL 151
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F KM G +TY L+ + G + A+ + +M Q+ Y + L
Sbjct: 152 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C + + +A + ++ + + P T+ LI + + ++ M D P+
Sbjct: 212 CKDRQVTEAFNLFSEMVT-KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + N ++ + ++A ++ ++ + ++P+ TY+++++
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRG-------------VEPNVVTYTALMDGHC 317
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + V+ M GC + + L+ G C + I +
Sbjct: 318 LLSEMDEAVKVFDTMVCKGCMPNVISYNTLI-----NGYCKI-----------QRIDKAI 361
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR-DKLEKLLNA 667
+T ++ N ++AV + + M + L + +I R DK L
Sbjct: 362 HYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLI-NGYCKIQRIDKAMYLFGE 420
Query: 668 LCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAH 704
+C +T S L +H LC E+ +D + H
Sbjct: 421 MCRQELIPDTVTYSTL---IHGLCHVERLQDAIALFH 454
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD+V YNAVL + +W V + +++ + P+ T+ + + ++G ++ VHE
Sbjct: 224 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 283
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+MA+ G Y ++ +EG + A + M G+ Y L LC
Sbjct: 284 VLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLC 343
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ RW++ ++ ++ PL ++TF L+ G +D I + + M H C P+
Sbjct: 344 SAERWEETEELLAEM--FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPD 401
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T ++ + + + +A L + T KP+ +Y+ +L+
Sbjct: 402 VITYTTVINGFCKEGLIDEAVMLLKSMTACGC-------------KPNTISYTIVLKGLC 448
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIP 605
+A +W E + M GC L+ L+ + G L+E A + L L G P
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKG---LVEQAIELLKQMLVNGCSP 505
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ ++ ++ ++A+ L+N M
Sbjct: 506 DLISYSTVIDGLGKAGKTDEALELLNVMV 534
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 168/415 (40%), Gaps = 59/415 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG---RPHEALRIFN 252
+LKGL W +++ + + ++ + + L++ L + G R HE L
Sbjct: 233 VLKGLCMAKRWGCVQELMEEMVRMACPPNIVT---FNTLISYLCRNGLFERVHEVLA--- 286
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
+ + PDI Y ++ + + G LK +++ RM PS +K P
Sbjct: 287 -QMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRM---PSYGLK------------P 330
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
++V YN +L + +W+ + ++ T+ + ++ Q+G D V E
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 390
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M G +TY ++ F +EG I+EAV +++M G Y + LC+
Sbjct: 391 EQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSA 450
Query: 433 GRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
RW DA ++ ++ ++ PL ITF LI G ++ I + + M + C P++
Sbjct: 451 ERWVDAEDLMSQM--IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508
Query: 491 TVNAMLKVYSRNDMFSKAKELF--------EETTRANSSGYTFLSGDG------------ 530
+ + ++ + +A EL T SS + LS +G
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568
Query: 531 --APLKPDEYTY----SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++ D Y SS+ + T E+ Y M SGC +++ + L+
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAY----MVSSGCVPNESTYTILI 619
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 128/326 (39%), Gaps = 61/326 (18%)
Query: 116 LKEMFEKDLNWVLDDDVQLG--SDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSE--REMT 171
L EMF+KD DDV D+F +N LVDR+ E +M
Sbjct: 355 LAEMFDKDCPL---DDVTFNILVDFFCQNG-----------------LVDRVIELLEQML 394
Query: 172 AKNW-----KFVRIMN---QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK--- 220
+ ++N + GL+ +LK + G K + VL + +
Sbjct: 395 VHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWV 454
Query: 221 DKRDLKSRFV----------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
D DL S+ + + L+ L K G +A+ + ML + PD+ +Y +V
Sbjct: 455 DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTV 513
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
LG+ G E ++L+ M K + P+ ++Y+++ +A +
Sbjct: 514 IDGLGKAGKTDEALELLNVMVNKG---------------MSPNTIIYSSIASALSREGRI 558
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
V +F ++ + ++ A Y + + + G+ + EF M SG TY +L
Sbjct: 559 NKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTIL 618
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVV 416
+R EG + EA + + +G +
Sbjct: 619 IRGLASEGFVKEAQEMLTELCSKGAL 644
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
A TY +VRA G+I +A+A + M +RG +Y+ + C G ++ A+ V+E
Sbjct: 122 AYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLE 181
Query: 444 KIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR 501
+ + L++ L+++++ D G +D + + + + CEP++ + NA+LK
Sbjct: 182 DLHA--RGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+ +EL EE R P+ T+++++ +E V
Sbjct: 240 AKRWGCVQELMEEMVRMAC-------------PPNIVTFNTLISYLCRNGLFERVHEVLA 286
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
MA GC D +A ++ + G + + + G P+ + + +L
Sbjct: 287 QMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLL 339
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 125/325 (38%), Gaps = 15/325 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P+ Y V+ A + V ++ + G P Y + +E + G +
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ G A+ +++ A ++G +++A+ +R++ G Y + L
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C RW ++E++ + P +TF LI G + + M +H C P+
Sbjct: 238 CMAKRWGCVQELMEEMVRM-ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPD 296
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I ++ + A E+ R S G LKP+ Y+++L+
Sbjct: 297 IRMYATIIDGICKEGHLKVAHEILN---RMPSYG----------LKPNVVCYNTLLKGLC 343
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+A +WE E + M C LD L+ + G + + +L G +P +
Sbjct: 344 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVI 403
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM 633
+T ++ + ++AV L+ +M
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSM 428
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 158/392 (40%), Gaps = 39/392 (9%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIM--NQSGLMFTEGQMLKLLKGLGDKGS 205
EK +A+ +L++ L + T K M N G +FT G ++ L G
Sbjct: 105 EKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGM---IIDSLCKDGM 161
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+A+ + + G D+ VY+ L+ L + GR EAL F M E + D+
Sbjct: 162 TTEALDMFSEMIGAGILPDV---VVYSSLMDGLCRFGRLKEALEFFKEM-EGRGISADVY 217
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQK------------------------PSKRIKNM 301
Y+S+ L + GL KE+ + M + + ++ M
Sbjct: 218 TYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 277
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
H K EPD++ YN ++N Q + +F+ L G+K + +Y + + +
Sbjct: 278 HHKGK----EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 333
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
K D F +M G +TY L+ A + G++ A M+ G S
Sbjct: 334 DQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 393
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y L LC NG ++A+ + + IK H +E+ F+ L+ G +++ F +
Sbjct: 394 YCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV-FSILLDGMCRAGKLEEAWKQFDEI 452
Query: 482 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
K+ EP+ N ++ M S+A +L
Sbjct: 453 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 161/425 (37%), Gaps = 60/425 (14%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+ Y ++++ +F ++ +G+ P Y M+ + + G+ EFF
Sbjct: 145 DVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 204
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
++M G + TY L+ G E + M RG A + L LC
Sbjct: 205 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 264
Query: 433 GRWQDAMLVVEKIKSLRHSK---PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
G+ +A ++E L H K P +T+ L+ G ++D +F+ + D + N
Sbjct: 265 GKVGEAQQILE----LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 320
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + N ++ Y ++ +A LFEE LKP TY++++ A
Sbjct: 321 VFSYNILINGYCKDQKIDEAFRLFEEMRPKG-------------LKPSTVTYNTLIGALC 367
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + + ++ M G L + + LL + G LE A D + H
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH---LEEAIDLFQSIKKTEH-- 422
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK----- 663
+ N E L++ M A E W + D IS++ LE
Sbjct: 423 -----------KPNIEVFSILLDGMCRA--GKLEEAWKQF-----DEISKNGLEPDTIAY 464
Query: 664 --LLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHEA 721
L+N LCN LS A+ L + E++ L S F ++ + IHEA
Sbjct: 465 NILINGLCN---------KGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 515
Query: 722 FDVKE 726
+ E
Sbjct: 516 IQLLE 520
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 142/334 (42%), Gaps = 29/334 (8%)
Query: 141 KNVEWH----PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLK- 195
K V W ++ + +A +L+D L + + + + +M+ G E +L
Sbjct: 233 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKG---KEPDILTY 289
Query: 196 --LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL G A + + L D+ + F Y L+ K + EA R+F
Sbjct: 290 NTLMNGLCLVGQLEDATKLFE---SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEE 346
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M L P Y+++ L Q G ++ KL M Q + +K
Sbjct: 347 MRPK-GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM-QTCGQFLK-------------- 390
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
L Y +L+ + + +F+ ++K+ KP+ + + ++ M ++GK + + F
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 450
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+++K+G + Y +L+ +G ++EAV + ME++G + + + + L
Sbjct: 451 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 510
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+A+ ++E++++ S +T L ++S D
Sbjct: 511 EIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFD 544
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y L+ L ++GR A ++F + ++ C + ++ Y + L + G L+E + L
Sbjct: 355 STVTYNTLIGALCQSGRVRTAQKLF-VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDL 413
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +++ K P++ V++ +L+ + + + + F ++ K+GL+
Sbjct: 414 FQSIKKTEHK---------------PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P Y + + + G + +M + G ++T+ V+++ +E +I+EA+
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 518
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ M R +V L C + +W A++
Sbjct: 519 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALV 552
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 123/316 (38%), Gaps = 21/316 (6%)
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
A+T LV+ W E I +AV M ++G+ G A Y L LC + A+ + E
Sbjct: 77 AVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHE 136
Query: 444 KIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
K+K + K T+ G+II S+ G + + +F M P++ ++++ R
Sbjct: 137 KMKG--NCKGDVFTY-GMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+A E F+E +G + D YTY+S++ + A W+ +
Sbjct: 194 FGRLKEALEFFKEM-------------EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLN 240
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
M G D L+ + GK + + + G+ P L + ++ +
Sbjct: 241 LMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVG 300
Query: 622 NYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVS 681
E A L ++A + + L D+ +L + S +T +
Sbjct: 301 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYN 360
Query: 682 NLSRALHALCRSEKER 697
L + ALC+S + R
Sbjct: 361 TL---IGALCQSGRVR 373
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 133/320 (41%), Gaps = 15/320 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD V + +++ ++ + +++ G +P TYG + + + G+ DL
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
KM K + Y ++ + + +++A+ M+ +G+ Y L CLC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
N GRW DA ++ + R P +TF LI + G + + +F M + +PNI
Sbjct: 287 NYGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N+++ + +D +A+++F + PD TY++++
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDC-------------LPDVVTYNTLINGFCK 392
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A + +++ M+ G + + L+ +A C + F ++ G P+ +
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 610 FTEMLIQAIVQSNYEKAVAL 629
+ +L EKA+ +
Sbjct: 453 YNTLLDGLCKNGKLEKAMVV 472
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 143/342 (41%), Gaps = 31/342 (9%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+R L+ + +K F Y+ L++ L GR +A R+ + MLE + P++
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVV 311
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
++S+ + G L E KL + M Q+ ++P++V YN+++N
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRS---------------IDPNIVTYNSLINGFC 356
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ +F + P TY + ++ K E FR M++ G +
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY L+ F++ + A + M GV Y L LC NG+ + AM+V E +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM 504
+ + +P T+ + G ++D +F + +P++ N M+ + + +
Sbjct: 477 QKSKM-EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+A LF + + DG PL PD TY++++ A
Sbjct: 536 KEEAYTLFIK-----------MKEDG-PL-PDSGTYNTLIRA 564
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 153/420 (36%), Gaps = 69/420 (16%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---- 296
R EA+ + + M+E PD + ++ L Q E V L+ERM K +
Sbjct: 148 GNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 297 ---RIKNMHRKNWDPVL-------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ N K +P L E D+V+Y+ V+++ +F ++
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
G++P TY + + G++ M + +T+ L+ AF +EGK+
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA----MLVVEK------------ 444
EA M QR + Y L C + R +A L+V K
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 445 IKSLRHSKPL------------------EITFTGLIISSMDGGHIDDCISIFQHM-KDHC 485
I +K + +T+T LI D+ +F+ M D
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PNI T N +L +N KA +FE ++ ++PD YTY+ M E
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK-------------MEPDIYTYNIMSE 493
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
A + E ++ ++L G + D + ++ + G F + E G +P
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 25/263 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTL--------------- 274
Y L+ R EA +IF LM+ +DC PD+ Y+++
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDC--LPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 275 ----GQVGLLKELVKLIERMRQKP-SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
G VG LI Q + + ++ + P+++ YN +L+ + +
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+ VF+ L+KS ++P TY + E M ++GK + + F ++ G + Y
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
++ F ++G EA M++ G + + Y L +G + ++++++S R
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Query: 450 HSKPLEITFTGLIISSMDGGHID 472
+ + + GL+ + G +D
Sbjct: 586 FAG--DASTYGLVTDMLHDGRLD 606
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/425 (18%), Positives = 163/425 (38%), Gaps = 69/425 (16%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F ++ KS PS + + + + K+DLV F KM G + TY +++
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+++ A+A + M + G + L C+ R +A+ +V+++ + + +P
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY-QPDT 170
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML------------------ 496
+TFT L+ + +++ + M C+P++ T A++
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 497 ----KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
K+ + ++S + + + + F D ++PD +TYSS++ +
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
W + M + L+ ++ GK L+EA ++ F E
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK----------LIEAEKL-----FDE 335
Query: 613 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCN 672
M IQ + N +LIN DR+ D+ +++ + + +
Sbjct: 336 M-IQRSIDPNIVTYNSLINGFCM-----------------HDRL--DEAQQIFTLMVSKD 375
Query: 673 AASSEITVSNLSRALHALCRSEKE-------RDLSSSAHFGSQAIDISPLHGIHEAFDVK 725
+T + L ++ C+++K RD+S G+ + +HG +A D
Sbjct: 376 CLPDVVTYNTL---INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 726 ETENV 730
+ V
Sbjct: 433 NAQMV 437
>gi|334187332|ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 187/417 (44%), Gaps = 46/417 (11%)
Query: 158 IRVLVDRLSEREMTAKNW-KFVRIM--NQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
+R L+ R+S+RE K K+V+++ + L+F E LG W Q + V
Sbjct: 71 VRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEE---------LGKSDKWLQCLEVFR 121
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
W+ K + + VY+KL++++GK G+ A+ +F+ M ++ PD + Y+++
Sbjct: 122 WMQ--KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM-KNSGCRPDASVYNALITAH 178
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
++ K +E++R K +K + R +P++V YN +L A S + V
Sbjct: 179 LHT---RDKAKALEKVRGYLDK-MKGIER------CQPNVVTYNILLRAFAQSGKVDQVN 228
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+FK L S + P T+ M+ ++G + +M + +T+ VL+ ++
Sbjct: 229 ALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSY 288
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ---DAMLVVEKIKSLRHS 451
++ + + +++ + T + + + N G+ + A V +K+ + +
Sbjct: 289 GKKQEFEKMEQTFKSLMRSKEKPTLPTFNSM---IINYGKARMIDKAEWVFKKMNDMNYI 345
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKE 510
P IT+ +I+ G + IF+ + + T+NAML+VY RN ++ +A +
Sbjct: 346 -PSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADK 404
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
LF N+S + + PD TY + +A A E + + K M G
Sbjct: 405 LFH-----NASAFR--------VHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 45/251 (17%)
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-- 468
+QR + VY +L + G+ + AM + ++K+ +P + LI + +
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN-SGCRPDASVYNALITAHLHTRD 183
Query: 469 ---------GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
G++D I + C+PN+ T N +L+ ++++ + LF++
Sbjct: 184 KAKALEKVRGYLDKMKGI-----ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL---- 234
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
D +P+ PD YT++ +++A + E V M + C+ D L+
Sbjct: 235 ---------DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLI 285
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---------I 630
+ + +E F SL+ + E P F M+I NY KA + +
Sbjct: 286 DSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII------NYGKARMIDKAEWVFKKM 339
Query: 631 NAMAYAPFHIT 641
N M Y P IT
Sbjct: 340 NDMNYIPSFIT 350
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 170/371 (45%), Gaps = 38/371 (10%)
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
+ SV QVGL + V++ R+++ +P + +YN VL+ +
Sbjct: 113 FISVISVYRQVGLAERAVEMFYRIKEFGC---------------DPSVKIYNHVLDTLLG 157
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
++ + ++ V++ +++ G +P+ TY + ++ + ++ K D + +M+ G A++
Sbjct: 158 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVS 217
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKI 445
Y ++ + E G + E R + +R SVY L LC ++ + L+ E +
Sbjct: 218 YTTVISSMCEVGMVKEG----RQLAER-FEPVVSVYNALINGLCKERDYKGGVELMSEMV 272
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLK-VYSRND 503
+ + P I+++ LI + G I+ S+ Q +K C PNI T+++++K + R
Sbjct: 273 E--KGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGT 330
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
F A +++ + R G L+P+ Y+++++ + + V+ M
Sbjct: 331 TFD-ALDMWNQMIR------------GFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHM 377
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
GC + + L+ ++ G + ++ +L +G P+ + +T M+ S +
Sbjct: 378 EEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKF 437
Query: 624 EKAVALINAMA 634
++A +LI M+
Sbjct: 438 KEAESLIEIMS 448
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/518 (19%), Positives = 197/518 (38%), Gaps = 89/518 (17%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG-------LKDKRDLK---- 226
+ + Q GL +M +K G S + VLD + G RD+K
Sbjct: 117 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF 176
Query: 227 --SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ F Y LL L K + A ++ + + + P+ +Y +V ++ +VG++KE
Sbjct: 177 EPNVFTYNVLLKALCKNNKVDGAKKLL-VEMSNKGCCPNAVSYTTVISSMCEVGMVKEGR 235
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L ER EP + VYNA++N +KG + ++ + G
Sbjct: 236 QLAER--------------------FEPVVSVYNALINGLCKERDYKGGVELMSEMVEKG 275
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG------------------------- 379
+ P+ +Y + + SG+ +L +M K G
Sbjct: 276 ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDAL 335
Query: 380 -------EAIG----ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
G + Y LV+ F G I++AV+ +ME+ G Y L
Sbjct: 336 DMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLING 395
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
G + A+ + K+ + P + +T ++ + + S+ + M K++C P
Sbjct: 396 FTKRGSLEGAVYIWNKMLT-SGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAP 454
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++ T NA +K A+++F + + P+ TY+ +L+
Sbjct: 455 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRC------------PPNIVTYNELLDGL 502
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
A A++ E + + + + G + + + LL + AG + ++ G+ P
Sbjct: 503 AKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDE 562
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 645
+ +++ Q E+AV +++ ++ R+W
Sbjct: 563 ITMNMIILAYCKQGKAERAVQMLDLVSCG-----RRKW 595
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 124/281 (44%), Gaps = 35/281 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G+ +A+SV + + ++++ Y L+ K G A+ I+N ML
Sbjct: 357 LVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRT---YGSLINGFTKRGSLEGAVYIWNKML 413
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS--------KRIKNMHRK 304
P++ Y S+ L + KE LIE M ++ PS K + + R
Sbjct: 414 TS-GCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 472
Query: 305 NWDPVL----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+W + P++V YN +L+ +++ + + + +++ G++ S +TY
Sbjct: 473 DWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNT 532
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV------R 408
+ +G + + KM +G++ +T +++ A+ ++GK AV + R
Sbjct: 533 LLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGR 592
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
+ V+ +V + LC + +D +++ E++ S R
Sbjct: 593 RKWRPDVISYTNVIWG----LCRSNCREDGVILFERMISER 629
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 72/381 (18%), Positives = 139/381 (36%), Gaps = 36/381 (9%)
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
Q V ++ +Q++ G S + + V Q G + E F ++ + G Y
Sbjct: 90 QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN 149
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKS 447
++ E +I R+M++ G Y L LC N + A L+VE S
Sbjct: 150 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVE--MS 207
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ P +++T +I S + G + + + + + EP + NA++ + +
Sbjct: 208 NKGCCPNAVSYTTVISSMCEVGMVKE----GRQLAERFEPVVSVYNALINGLCKERDYKG 263
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
EL E S P+ +YS+++ + + Q E + M G
Sbjct: 264 GVELMSEMVEKGIS-------------PNVISYSTLINELSNSGQIELAFSLLAQMLKRG 310
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSL-------LEAGEIPHPLFFTEMLIQAIVQ 620
C H + +S C + FD+L G P+ + + ++
Sbjct: 311 C------HPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSH 364
Query: 621 SNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITV 680
N +KAV++ M R + L R S + + N + + +
Sbjct: 365 GNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVY 424
Query: 681 SNLSRALHALCRSEKERDLSS 701
+++ + ALCR K ++ S
Sbjct: 425 TSM---VEALCRHSKFKEAES 442
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 178/417 (42%), Gaps = 41/417 (9%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ I+ + GRP E I + ++E + P + Y ++ L
Sbjct: 70 RTVRSR---TKLMNIMIEKGRPQEVQSILDSIIEGGH-KPSLVTYTTLLAALTIQKHFDS 125
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ +I ++ + +EPD + +NAV+NA S + F ++++
Sbjct: 126 IHSIISQVEENG---------------MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKE 170
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL-TYKVLVRAFWEEGKIN 401
SG KP+ +T+ ++ +G+ + + M++ L TY VLVRA+ + I
Sbjct: 171 SGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIM 230
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+A V M G+ A Y +A NG A ++ ++++ + +P E T +
Sbjct: 231 KAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQN-SNVQPNERTCCII 289
Query: 462 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTR 517
I G I + + MKD +PN+ N+++K + D ++ L EE
Sbjct: 290 IGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFG- 348
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+KPD T+S+++ A + A + ++ M + Q D ++
Sbjct: 349 ---------------VKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSI 393
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L RAG+ E ++++++G P+ + FT ++ E A+ + M
Sbjct: 394 LAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMC 450
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 60/306 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ + G+ ++AM + + +K+ + + L+ G AG P E+ ++ LM
Sbjct: 148 VINAFSESGNMQEAMK---YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMS 204
Query: 256 ED-----------------CN------------------LYPDIAAYHSVAVTLGQVGLL 280
+D CN L PD Y+++A Q G
Sbjct: 205 QDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEA 264
Query: 281 KELVKLIERMRQ---KPSKR------------------IKNMHRKNWDPVLEPDLVVYNA 319
+ +I M+ +P++R ++ ++R D L+P+LVV+N+
Sbjct: 265 SQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMK-DLGLQPNLVVFNS 323
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ + + GV V + + G+KP T+ M +G D E F M K+
Sbjct: 324 LIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKAR 383
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
A Y +L + + G+ +A + M + G ++ + C+ GR + A+
Sbjct: 384 IQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAI 443
Query: 440 LVVEKI 445
+ EK+
Sbjct: 444 KIFEKM 449
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 170/416 (40%), Gaps = 67/416 (16%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E+ ++PD+ Y+++ + GLL+E +L++ M K L+P +
Sbjct: 384 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG---------------LKPCV 428
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YNA++N + ++ V ++ K G+ P ATY + + ++ F +
Sbjct: 429 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 488
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G +++ L+ + G +++A+ R+M+ G+ +Y L C NG
Sbjct: 489 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 548
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTV 492
+A+ V +++ L L++ I++ + + + +F M + P+ T
Sbjct: 549 MSEALKVRDEM--LEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 606
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ Y ++ +KA LFE + N LKPD TY+++++ +
Sbjct: 607 TTLINGYXKDGNMNKAVTLFEMMIQRN-------------LKPDVVTYNTLIDGFCKGSE 653
Query: 553 WE--------------YFEYVYKGMALSG-CQLDQTKHAWLL--------VEAS------ 583
E Y ++ G+ ++G C + A+ L EA+
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713
Query: 584 ------RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
RAG + ++L G +P + + ++ I + N ++A AL+N M
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 769
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 128/342 (37%), Gaps = 24/342 (7%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+V++ ++ V + + + F+ L+ GL S + +++ G DL E +++
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ +SG + T +++ A + KI + + +ME++GV Y L C G
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
++A +++ + S + KP T+ +I G + M K P+ T N
Sbjct: 409 LEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467
Query: 494 AMLKVYSRNDMFSKAKELFEETTRAN--------SSGYTFLSGDG--------------A 531
+L RND A+ +F+E S+ LS +G A
Sbjct: 468 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 527
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L PD Y+ ++ V M GC LD + +L +
Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ F + E G P FT ++ N KAV L M
Sbjct: 588 DELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 26/245 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK--ELVKL 286
+ +T L+ K G ++A+ +F +M++ NL PD+ Y+++ G K E+ K+
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLID-----GFCKGSEMEKV 657
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E S+RI P+ + Y ++N F ++ ++ + G +
Sbjct: 658 NELWNDMISRRIY------------PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 705
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
+ T ++ ++G EF M G +TY L+ F +E ++ A A
Sbjct: 706 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 765
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
V ME G++ Y + GR Q+A L++ K+ R P T+T LI
Sbjct: 766 VNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE-RGVNPDRSTYTSLI---- 820
Query: 467 DGGHI 471
GH+
Sbjct: 821 -NGHV 824
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 134/342 (39%), Gaps = 39/342 (11%)
Query: 219 LKDKRDLKS------RFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVA 271
LK RD+K+ +YT L+ + G EAL++ + MLE C L D+ Y+++
Sbjct: 518 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXL--DVVTYNTIL 575
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
L + +L E +L M ++ + PD + ++N
Sbjct: 576 NGLCKEKMLSEADELFTEMTERG---------------VFPDFYTFTTLINGYXKDGNMN 620
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+F+ + + LKP TY ++ + + + V+E + M ++Y +L+
Sbjct: 621 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 680
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ G ++EA M ++G T + C G A + + L+
Sbjct: 681 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML-LKGI 739
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 510
P IT+ LI + ++D ++ M++ P++ T N +L +SR +A+
Sbjct: 740 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 799
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ + + PD TY+S++ T +
Sbjct: 800 IMLKMIERG-------------VNPDRSTYTSLINGHVTQNN 828
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 106/281 (37%), Gaps = 34/281 (12%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ L + +M ++ + M + G+ L+ G G+ +A+++ + +
Sbjct: 574 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI--- 630
Query: 221 DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+R+LK V Y L+ K + ++N M+ +YP+ +Y + +G
Sbjct: 631 -QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR-RIYPNHISYGILINGYCNMGC 688
Query: 280 LKELVKLIERMRQK------------------------PSKRIKNMHRKNWDPVLEPDLV 315
+ E +L + M +K + + NM K + PD +
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG----IVPDGI 744
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++N + F + ++ SGL P TY + + + G+ KM
Sbjct: 745 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 804
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ G TY L+ + + EA M QRG V
Sbjct: 805 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 845
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 144/342 (42%), Gaps = 24/342 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G + + +++ + R + + Y L+ KA A +F+ M
Sbjct: 386 LIDGLCKVGRQEEGLGLVERMRS--QPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK--------------RIKNM 301
+D + P++ +++ + + G + V+ M+ K K + N+
Sbjct: 444 KD-GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNI 502
Query: 302 HR--KNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + +D +LE PD +VY +++ + + +V +++++G P ++ +
Sbjct: 503 EKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVL 562
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + K D +E ++M +G +TY L+ F + G + A ++ M + G+
Sbjct: 563 INGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGL 622
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
V T Y L C NG +AM + + S P + + LI S +D +
Sbjct: 623 VPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLAL 682
Query: 476 SIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
S+ MK +PN T NAM K + SKA EL + T
Sbjct: 683 SLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMT 724
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 125/306 (40%), Gaps = 45/306 (14%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
NA+L A + ++K + + ++++ ++P+ T+G+ + + + + D E F KM
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM-N 367
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
GE+ G L ++ Y L LC GR ++
Sbjct: 368 GGESNGFLVEPDVI-----------------------------TYNTLIDGLCKVGRQEE 398
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
+ +VE+++S P +T+ LI I+ +F M KD PN+ T+N ++
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
++ + A E F E + G G LK + TY++++ A + E
Sbjct: 459 DGMCKHGRINGAVEFFNE-----------MQGKG--LKGNAVTYTALIRAFCNVNNIEKA 505
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
++ M +GC D + L+ S+AGK + EAG P + F +LI
Sbjct: 506 MELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFN-VLIN 564
Query: 617 AIVQSN 622
+ N
Sbjct: 565 GFCRKN 570
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 171/431 (39%), Gaps = 39/431 (9%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F Y ++ L + G A +F M L PDI Y+S+ G+VG+L V +
Sbjct: 250 SVFTYNMVIGCLAREGDLEAARSLFEEMKAK-GLRPDIVTYNSLIDGYGKVGMLTGAVSV 308
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E M+ D EPD++ YN+++N + F +++ GL+
Sbjct: 309 FEEMK---------------DAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQ 353
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ ++G ++FF M + G TY L+ A + G +NEA
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M+Q GV Y L LC +GR ++A + + + +I +T L +
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQI-YTSLFHGYI 472
Query: 467 DGGHIDDCISIFQHM-KDHCEPNI---GT-VNAMLKVYSRNDMFSKAKELFEETTRANSS 521
++ + I + M K + +P++ GT + + + D + +E+ + ANS
Sbjct: 473 KAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANS- 531
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
Y Y+++++A + + + M G ++ + L+
Sbjct: 532 ----------------YIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDG 575
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
+ G FD + G P+ + +T ++ E+A L N M
Sbjct: 576 LCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635
Query: 642 ERQWTELFESN 652
+ +T L + N
Sbjct: 636 KLVYTSLIDGN 646
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 127/326 (38%), Gaps = 15/326 (4%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
V P V++ + N V + F ++ K + P + + + +S K L
Sbjct: 176 VCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
FF+ M +G + TY +++ EG + A + M+ +G+ Y L
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
G A+ V E++K +P IT+ LI I MK +P
Sbjct: 296 YGKVGMLTGAVSVFEEMKD-AGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ T + ++ + + M +A + F + R L+P+E+TY+S+++A+
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG-------------LQPNEFTYTSLIDAN 401
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ M +G L+ + LL G+ E F +LL+AG +
Sbjct: 402 CKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQ 461
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAM 633
+T + I EKA+ ++ M
Sbjct: 462 QIYTSLFHGYIKAKMMEKAMDILEEM 487
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++YT L+ K G+ EA+ + M +D + + Y + L ++GL+++ V+ +
Sbjct: 532 YIYTTLIDAYFKVGKTTEAVNLLQEM-QDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFD 590
Query: 289 RMRQ---KPSKRI-----------------KNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M + +P+ I KN+ + D + PD +VY ++++ +
Sbjct: 591 HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHG 650
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ ++ + G++ Y + + G+ L +M + G +
Sbjct: 651 NPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCI 710
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVV-GTASV 421
L+R ++E G INEA+A +M +RG++ GT +
Sbjct: 711 CLLRKYYELGDINEALALHDDMARRGLISGTIDI 744
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 115/556 (20%), Positives = 219/556 (39%), Gaps = 67/556 (12%)
Query: 131 DVQLGSDYFAKNVE-WHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFT 189
D +LG F +++ WH R R+ + I + +L + WK ++ + S + +
Sbjct: 73 DTRLGFRLFIWSLKSWH--LRCRTVQDLI---IGKLIKENAFELYWKVLQELKNSAIKIS 127
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
L++ + G +A+ + K DL F + +L L + AL
Sbjct: 128 SEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDL---FAFNLILHFLVRKEAFLLALA 184
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM----- 301
++N ML+ CNL PD+ Y + L + ++ + L + M + P++ I ++
Sbjct: 185 VYNQMLK-CNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGL 243
Query: 302 --HRKNWDPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+K +D DL+ YN +LN S F + + L K G
Sbjct: 244 CQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGV 303
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
YG + + ++ +Y+ H +++KM + + Y +++R +EG++ EA+ +
Sbjct: 304 IGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGE 363
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M +RG+ Y L C+ G +A + +I S P T++ LI G
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI-SKHDCFPNNHTYSILICGMCKNG 422
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE--ETTRANSSGYTFL 526
I+ IF+ M K C P++ T N+++ + + +A+ LF E R S
Sbjct: 423 LINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLS 482
Query: 527 SG-------------------DGAPLK--------------PDEYTYSSMLEASATAHQW 553
G G LK PD TY+ ++
Sbjct: 483 QGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNI 542
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
++K M L G D + L+ RAG+ F+ +++ G +P + +
Sbjct: 543 NGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTI 602
Query: 614 LIQAIVQSNYEKAVAL 629
+ + ++N A+++
Sbjct: 603 MTWSCRENNISLALSV 618
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 182/446 (40%), Gaps = 61/446 (13%)
Query: 141 KNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQML--- 194
K +E H R A A L+D + T K R+M QSGL +T ++
Sbjct: 78 KRMEGH---RCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAF 134
Query: 195 ----------KLLKGLGDKGSWRQAMS---VLDWVY-------GLKDKRDLKSR------ 228
KL + + ++ ++ ++D V LK D+KSR
Sbjct: 135 KKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNI 194
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F YT ++ LGK+G +A +F M + L Y+S+ LG+ G KL
Sbjct: 195 FTYTSMIDGLGKSGHVDKAFFLFEEMTSE-GLVATRVVYNSLIHGLGRSGRADAAAKLFR 253
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M K L+PD V + +++ + + +F++ R G
Sbjct: 254 EMLSKG---------------LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALD 298
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
Y + ++ + +S + D E F ++ + G T+ L+ + G+I++A +
Sbjct: 299 VNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLG 358
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+M++ G +VY L L +GR ++A ++ +++SL + +P +T+ LI S G
Sbjct: 359 DMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGY-EPDVVTYNTLIDESCKG 417
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
G I+D + +F+ + N T N +L +A +LF + G
Sbjct: 418 GRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGV----- 472
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWE 554
+ PD TY+++L + A E
Sbjct: 473 ----IDPDFVTYTTLLNGARQAGLSE 494
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 146/345 (42%), Gaps = 21/345 (6%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
++R L PD +N ++NA + + V+ +F++++ P+ TY + ++ +
Sbjct: 111 VYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVC 170
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ G + + F M G TY ++ + G +++A M G+V T
Sbjct: 171 KCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
VY L L +GR A + ++ S + +P +TFT L+ G + IFQ
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLS-KGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289
Query: 481 MKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
+D C ++ N ++ ++ +A E+F E L DG L PD YT
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGE-----------LEEDG--LVPDVYT 336
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
++++++ + + + M +GC D T + L+ ++G+ +E A LL
Sbjct: 337 FNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGR---VEEAGQLLL 393
Query: 600 EA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
E G P + + ++ ++ E A+ L ++ F T
Sbjct: 394 EMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANT 438
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 171/413 (41%), Gaps = 34/413 (8%)
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV--KLIERMRQ 292
+ + ++GR +A ++ + M D ++ PD+ +++++ + G L V +L+ +RQ
Sbjct: 1 MGVYARSGRFDDARQLLDAM-RDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQ 59
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
L PD + YN +++AC VF+++ S +P TY
Sbjct: 60 AG---------------LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTY 104
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ V + GK F+++ + G A+TY L+ AF +EG + + +
Sbjct: 105 NAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK 164
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
G Y + GR A+ + ++++++ P +T+T L+ S I
Sbjct: 165 AGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAI-GCTPDAVTYTVLVDSLGKMDRIS 223
Query: 473 DCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ + + M D +P + T +A++ Y+++ A+ F+ R SG
Sbjct: 224 EAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFD---RMVESG--------- 271
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
+KPD Y ML+ A + + +Y+ M G + D + LL ++ + +
Sbjct: 272 -VKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 330
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
E + E+ +PL + +LI+A S + Y P +RQ
Sbjct: 331 EGVIQDMEAVFEM-NPLVISSILIKAECISQGASLLKRACLQGYEPDDGPDRQ 382
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 131/336 (38%), Gaps = 66/336 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
Y L++ + +A+ +F M+ +C PD+ Y+++ G+ G +E +
Sbjct: 67 ITYNTLISACSQGSNLDDAVAVFEEMIASECR--PDLWTYNAMVSVHGRCGKAQEAELMF 124
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ + +K +PD V YN++L A + V V ++L K+G +
Sbjct: 125 KELVEKG---------------FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRK 169
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + + + G+ DL + +M G A+TY VLV + + +I+EA +
Sbjct: 170 DGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVL 229
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M G+ T + L C +GR DA E TF ++ S +
Sbjct: 230 EEMADAGLKPTLVTFSALICAYAKSGRQDDA----------------ERTFDRMVESGV- 272
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
+P+ ML V++R+D K L+ + GY
Sbjct: 273 ------------------KPDRLAYLVMLDVFARSDETRKLMVLYRAMIK---DGY---- 307
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
KPD+ Y +L A A ++ + E V + M
Sbjct: 308 ------KPDDGLYQVLLAALAKGNEHDEIEGVIQDM 337
>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 574
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 180/424 (42%), Gaps = 52/424 (12%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG---QVGL 279
R ++SR TKL+ +L + GRPHEA +F + E + P + +Y ++ + Q G
Sbjct: 43 RTVRSR---TKLMNVLIERGRPHEAQTVFKTLAETGH-RPSLISYTTLLAAMTVQKQYGS 98
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ +V +E+ K D + +NAV+NA S + +
Sbjct: 99 ISSIVSEVEQSGTK------------------LDSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA-IGA--LTYKVLVRAFWE 396
+++ GL P+ +TY ++ +GK + E M + G +G T+ VLV+A+ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLE 455
+ K+ EA V+ ME+ GV Y +A C G A VVEK+ +KP
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI----GTVNAMLKVYSRNDMFSKAKE 510
T ++ G + D + + MK+ E N+ +N ++V R D +
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR-DGIDEVLT 319
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
L +E +K D TYS+++ A ++A E V+K M +G +
Sbjct: 320 LMKECN----------------VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
D ++ L RA + E ++L+ P+ + FT ++ + + A+ +
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVF 422
Query: 631 NAMA 634
N M
Sbjct: 423 NKMC 426
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 28/289 (9%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + GL T L+KG G G ++ +LD + + + + L+ K
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-LLKELVKLIERM----RQKPS 295
+ EA + M E+C + PD Y+++A Q G ++ +++E+M + KP+
Sbjct: 201 KKKVEEAWEVVKKM-EECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPN 259
Query: 296 KRIKNMH-----------------RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
R + R+ + +E +LVV+N+++N V G+ V
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLT 319
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW--E 396
+++ +K TY M +G + + F++M K+G A Y +L + + +
Sbjct: 320 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
E K E + +E R V ++ + C+NG DAM V K+
Sbjct: 380 EPKKAEELLETLIVESRPNV---VIFTTVISGWCSNGSMDDAMRVFNKM 425
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 180/465 (38%), Gaps = 40/465 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+ +E M K ++ R M GL+ + + ++KGL + W+ A+S+
Sbjct: 322 VLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL------F 375
Query: 220 KDKRD--LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
K+ D + F Y L+ L + + EAL ++ M E + P I YHS+ +
Sbjct: 376 KEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNET-GVKPYIVTYHSLLLCYCVN 434
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + E VKL M P K P++V Y ++ + + + +
Sbjct: 435 GCMDEAVKLYTEM---PGKG------------FTPNVVTYTTLMKGHINKAAFDKAYALL 479
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+++++G+ + TY + + G+ V E ++ G A+TY ++ F +
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
G + A A + M +G+ Y C A+ ++ ++ + +P
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC-KGLRPDIAA 598
Query: 458 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+ LI G++ + + M KD PNI N+ + Y M +A L+E+
Sbjct: 599 YNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMI 658
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
+ +G L D TY+++++ + + +Y M G D
Sbjct: 659 K-----------EGIDL--DTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFT 705
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
L R G D + P+ L + MLI +++
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY-NMLINGYLRN 749
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 164/434 (37%), Gaps = 52/434 (11%)
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM- 301
+AL IF L D L P Y + + G+ ++ +L +MR PS NM
Sbjct: 300 KALDIFEETLRD-GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358
Query: 302 -----HRKNWDPVLE----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ K W + PD YN +++ + + +++++ ++G+K
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK 418
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P TY + +G D + + +M G +TY L++ + ++A A
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYAL 478
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M+Q GV Y L LC GR + ++++ ++ P +T+ +I +
Sbjct: 479 LAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET-EGFVPTAMTYNSIINGFI 537
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR-----------NDMFSKAKELFEE 514
G + +++Q M PNI T + + Y + ND+ + K L +
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDV--RCKGLRPD 595
Query: 515 TTRANSSGYTF---------------LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
NS + F + DG L P+ Y+S + E +
Sbjct: 596 IAAYNSLIFGFCQEGNMSHALQVLVLMLKDG--LLPNISVYNSFITGYKNLKMMEEALRL 653
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
Y+ M G LD + L+ S+ G + ++ G IP + FT +
Sbjct: 654 YEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713
Query: 620 QSNYEKAVALINAM 633
+ + A L++ M
Sbjct: 714 NGDIDDARKLLDEM 727
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 81/436 (18%), Positives = 158/436 (36%), Gaps = 28/436 (6%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
RK D P +N+V++ V + + + +L +G K S M
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+ + F + + G +TY VL+R EEG +A R M G++ + + +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
+ L N+ W+DA+ + +++ P T+ LI I + +++++ M
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMAD--SGIPDAFTYNILIHWLCQRRKIREALNLWEKMN 413
Query: 483 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
+ +P I T +++L Y N +A +L YT + G G P+ TY+
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKL-----------YTEMPGKG--FTPNVVTYT 460
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
++++ ++ + M +G + + L+ G+ +
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE 520
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL 661
G +P + + ++ I A A+ M +T + D
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580
Query: 662 EKLLNALCNCNAASSEITV-----------SNLSRALHALCRSEKERDLSSSAHFGSQAI 710
K+LN + C +I N+S AL L K+ L + + + S
Sbjct: 581 LKMLNDV-RCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFIT 639
Query: 711 DISPLHGIHEAFDVKE 726
L + EA + E
Sbjct: 640 GYKNLKMMEEALRLYE 655
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 18/188 (9%)
Query: 254 MLEDC---NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
ML D L PDIAAY+S+ Q G + ++++ M + L
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDG---------------L 627
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P++ VYN+ + + +++++ K G+ ATY ++ + G +
Sbjct: 628 LPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALK 687
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+ +M G +T+ L G I++A + M + + +Y L
Sbjct: 688 LYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYL 747
Query: 431 NNGRWQDA 438
NG+ Q+A
Sbjct: 748 RNGKLQEA 755
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 136/346 (39%), Gaps = 33/346 (9%)
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M G + A + V++RA ++EG ++AV M + V LC
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-----EPN 488
A+LV+ K++ P + TF ++ + GG +++ + H+KD + +
Sbjct: 227 DANRALLVLRKMQDAGFV-PWDFTFNSVVDVLVKGGRMEEAL----HIKDELLATGKKMS 281
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYTFL----SGDGAP-------- 532
+ ++ Y KA ++FEET R YT L + +G P
Sbjct: 282 VVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCR 341
Query: 533 ------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
L P ++ +++ W+ ++K MA SG D + L+ +
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRR 400
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
K + ++ + E G P+ + + +L+ V ++AV L M F +T
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460
Query: 647 ELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
L + + ++ + DK LL + + ++ T + L L + R
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGR 506
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 135/341 (39%), Gaps = 66/341 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ ++ L+ + +P EAL+ F M + + PD Y+SV G+VG + E V+L E
Sbjct: 179 YTFSTLINCAKRCRQPEEALKWFERMKSE-GIVPDEVTYNSVIDMYGRVGRVNEAVELYE 237
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+++ NW + D V Y A+ N + ++ + + +++R SG P+
Sbjct: 238 KLKSV-----------NW----KLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPN 282
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A M + ++GK + + F +M SG + +T +LV + G ++A
Sbjct: 283 AVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYE 342
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
++ G W+ + V + L+ + ++G
Sbjct: 343 TLKTEG--------------------WKCDVAV----------------YNSLMKACVEG 366
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G ++ I + MK C P+ T + Y+ M A+ +F++ N
Sbjct: 367 GRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNG------- 419
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
KPD ++ M+ A A + E ++ M SGC
Sbjct: 420 ------KPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGC 454
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 118/284 (41%), Gaps = 19/284 (6%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ L W +K + + Y ++ + G+ GR +EA+ ++ L+ N D
Sbjct: 192 RQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYE-KLKSVNWKLDTVT 250
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y ++A + G + +++L++ MR S P+ V+ N ++
Sbjct: 251 YGAIANVYARAGDYQSIMQLVQEMRDSGSS---------------PNAVIMNTLMGTLSK 295
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + VF ++R SG+ P+ T + +E+ + G YD E + + G
Sbjct: 296 AGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAV 355
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L++A E G++ +A ++ M++ G Y G A + +K+
Sbjct: 356 YNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVV 415
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPN 488
+L + KP FT +I + G I+ IF M + C P+
Sbjct: 416 AL-NGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPD 458
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 135/341 (39%), Gaps = 66/341 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ ++ L+ + +P EAL+ F M + + PD Y+SV G+VG + E V+L E
Sbjct: 179 YTFSTLINCAKRCRQPEEALKWFERMKSE-GIVPDEVTYNSVIDMYGRVGRVNEAVELYE 237
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+++ NW + D V Y A+ N + ++ + + +++R SG P+
Sbjct: 238 KLKSV-----------NW----KLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPN 282
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A M + ++GK + + F +M SG + +T +LV + G ++A
Sbjct: 283 AVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYE 342
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
++ G W+ + V + L+ + ++G
Sbjct: 343 TLKTEG--------------------WKCDVAV----------------YNSLMKACVEG 366
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G ++ I + MK C P+ T + Y+ M A+ +F++ N
Sbjct: 367 GRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNG------- 419
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
KPD ++ M+ A A + E ++ M SGC
Sbjct: 420 ------KPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGC 454
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 118/284 (41%), Gaps = 19/284 (6%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ L W +K + + Y ++ + G+ GR +EA+ ++ L+ N D
Sbjct: 192 RQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYE-KLKSVNWKLDTVT 250
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y ++A + G + +++L++ MR S P+ V+ N ++
Sbjct: 251 YGAIANVYARAGDYQSIIQLVQEMRDSGSS---------------PNAVIMNTLMGTLSK 295
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + VF ++R SG+ P+ T + +E+ + G YD E + + G
Sbjct: 296 AGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAV 355
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L++A E G++ +A ++ M++ G Y G A + +K+
Sbjct: 356 YNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVV 415
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPN 488
+L + KP FT +I + G I+ IF M + C P+
Sbjct: 416 AL-NGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPD 458
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/380 (18%), Positives = 153/380 (40%), Gaps = 37/380 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++PD ++ ++N Q + F++++ G+ P TY +++ + G+ +
Sbjct: 174 IQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAV 233
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E + K+ + +TY + + G + V+ M G A + L L
Sbjct: 234 ELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTL 293
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
G+ A V ++++ S P +T + L+ G D +++ +K + + +
Sbjct: 294 SKAGKVNQAKKVFNEMRTSGVS-PTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCD 352
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ N+++K +A+++ +E RA + PD TY + + A
Sbjct: 353 VAVYNSLMKACVEGGRVEQAEDILKEMKRAGCN-------------PDHLTYRTAMNTYA 399
Query: 549 TAHQWEYFEYVY-KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
T + ++ K +AL+G + D ++ AG+ FD ++E+G
Sbjct: 400 TKGMVDPARRMFDKVVALNG-KPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPD 458
Query: 608 LFFTEMLIQAIVQS-NYEKAVALINAMA--YAPFHITERQWTELFESNEDRISRDKLEKL 664
+ ML+ + + N ++ +A+++ + AP H + E+ SRD++ ++
Sbjct: 459 ERVSGMLLSCMAMAKNDDERLAILDCLDKFNAPLH----ELMSAIVRKEEPRSRDEVAEM 514
Query: 665 L-------------NALCNC 671
+ LCNC
Sbjct: 515 VEKFISDYPETDSRKPLCNC 534
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 156/356 (43%), Gaps = 43/356 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +GS +A S+ + G D+++ Y+ L+ L + G+ A+ + + L
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRT---YSALIHGLLRNGKLQGAMELLSEFL 648
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E L PD+ Y+S+ + G + + +L E M QK + P+++
Sbjct: 649 EK-GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG---------------ISPNII 692
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNA++N + + + +F + GL +A TY ++ +SG F +M
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G + Y L+ +EG +A++ Q+G T+S+ L C +G+
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGFCKSGKV 811
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
+A ++E + +H KP +T+T LI G + + F M K + PN T A
Sbjct: 812 IEANQLLEDMVD-KHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTA 870
Query: 495 MLKVYS----RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+L Y+ R++MF+ LF+E + ++PD T+S M++A
Sbjct: 871 LLSGYNMAGRRSEMFA----LFDEMIAKD-------------IEPDGVTWSVMIDA 909
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 158/381 (41%), Gaps = 45/381 (11%)
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
V D + +K + + + ++ L + G +A R+F +M+ + P+ Y ++
Sbjct: 430 VKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVS-LGVKPNAVIYTTLI 488
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
Q G +E V++++ M +K ++PD++ YN+V+ S + +
Sbjct: 489 KGHVQEGRFQEAVRILKVMDKKG---------------VQPDVLCYNSVIIGLCKSRKME 533
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
++ + GLKP+ TYG + +SG+ + +F++M G A + L+
Sbjct: 534 EAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALI 593
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ +EG EA + R M R V Y L L NG+ Q AM ++ + +
Sbjct: 594 DGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE-KGL 652
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
P T+ +I G I + ++M + PNI T NA++ + +A+E
Sbjct: 653 VPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARE 712
Query: 511 LFE----ETTRANSSGY-TFLSG--------------DGAPLK---PDEYTYSSMLEASA 548
LF+ + N+ Y T + G D LK PD + YS++++
Sbjct: 713 LFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCR 772
Query: 549 TAHQWE-----YFEYVYKGMA 564
E + E V KG A
Sbjct: 773 KEGNTEKALSLFLESVQKGFA 793
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 107/541 (19%), Positives = 204/541 (37%), Gaps = 80/541 (14%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK V++ L + ++ ++M++ GL+ L+ G G +
Sbjct: 264 EKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCT 323
Query: 208 QAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+A +L+ ++ GLK YT L+ + G EA R+ ML + ++
Sbjct: 324 EAKLMLEEMFSKGLK-----PGHVAYTALIDGFMRQGDSGEAFRVKEEMLAR-GVKLNLF 377
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+++ + + G +++ L+ M K PD YN ++ +
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIK---------------PDTQTYNNMIEGYL 422
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
V + +++KS L P+A T G+ + + + G + F M G A+
Sbjct: 423 KEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAV 482
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEK 444
Y L++ +EG+ EAV ++ M+++GV Y + LC + + ++A +VE
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEM 542
Query: 445 IK-----------SLRHS----------------------KPLEITFTGLIISSMDGGHI 471
I+ +L H P ++ T LI G
Sbjct: 543 IERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGST 602
Query: 472 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE-----------TTRAN 519
+ SIF+ M P++ T +A++ RN A EL E T +
Sbjct: 603 TEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSI 662
Query: 520 SSGYTFLSGDGAPLKPDEY-----------TYSSMLEASATAHQWEYFEYVYKGMALSGC 568
SG+ G G + EY TY++++ A + E ++ G+ G
Sbjct: 663 ISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGL 722
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
+ +A ++ ++G FD + G P ++ ++ + N EKA++
Sbjct: 723 AHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALS 782
Query: 629 L 629
L
Sbjct: 783 L 783
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 98/480 (20%), Positives = 175/480 (36%), Gaps = 49/480 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G KG + +A+S + G K + LL+ L KA + R +N ML
Sbjct: 172 LIDGYKKKGLFDEAVS---FFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E N+ D+ Y + + G KE +L+ M +K P LV
Sbjct: 229 E-ANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGC---------------SPSLV 272
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN V+ + + F + K + K GL TY + ++ + + +M
Sbjct: 273 TYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEM 332
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G + Y L+ F +G EA M RGV Y L +C G
Sbjct: 333 FSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDM 392
Query: 436 QDA-MLVVEKIKSLRHSKPLEITFTGLI---ISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
+ A L+ E I + KP T+ +I + + + D +S + K + P T
Sbjct: 393 EKADALLNEMI--MVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLS--EMKKSNLVPTAYT 448
Query: 492 VNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSG------------------D 529
++ R+ A +FE + N+ YT L D
Sbjct: 449 CGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMD 508
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
++PD Y+S++ + + E + M G + + + L+ ++G+
Sbjct: 509 KKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQ 568
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
+ + F +L G P+ + T ++ + + +A ++ M H R ++ L
Sbjct: 569 VADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALI 628
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNL-YPDIAAYHSVAVTLGQVGLLKELVKLI 287
FVY+ L+ K G +AL +F LE + ++ +++ + G + E +L+
Sbjct: 762 FVYSALIDGCRKEGNTEKALSLF---LESVQKGFASTSSLNALMDGFCKSGKVIEANQLL 818
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M K K PD V Y +++ + K F ++K L P
Sbjct: 819 EDMVDKHVK---------------PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMP 863
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKM-AKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
+A TY + +G+ + F +M AK E G +T+ V++ A +EG + +
Sbjct: 864 NALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDG-VTWSVMIDAHLKEGDHVKTLKL 922
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
V +M ++G + +V + L LC + + V+EKI+
Sbjct: 923 VDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIE 962
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 142/355 (40%), Gaps = 67/355 (18%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD + ++ L G + E ++L++RM + K P L+ NA++
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK---------------PTLITLNALV 184
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N + + + ++ ++G +P+ TYG ++VM +SG+ L E RKM +
Sbjct: 185 NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIK 244
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD-AML 440
+ A+ Y +++ ++G ++ A ME +G +Y L C GRW D A L
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 441 VVEKIKSLRHSKPLEITFTGLI-------------------------------ISSMDGG 469
+ + IK R P + F+ LI S +DG
Sbjct: 305 LRDMIK--RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 470 HIDDCISIFQHMKD-----HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
++ + HM D C PNI T N ++ Y + ++ ELF + +
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS-------- 414
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
L G + D TY+++++ + E + +++ M + D + LL
Sbjct: 415 -LRG----VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 167/418 (39%), Gaps = 55/418 (13%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
TA + +R M + + + ++ GL GS A ++ + + K D+ +
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI---II 284
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ AGR + ++ M++ + PD+ A+ ++ + G L+E +L + M
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ + PD V Y ++++ +Q + + G P+
Sbjct: 344 IQRG---------------ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + + ++ D E FRKM+ G +TY L++ F E GK+ A + M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGG 469
R V Y L LC+NG + A+ + EKI+ + L+I +II M +
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE--KSKMELDIGIYNIIIHGMCNAS 506
Query: 470 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+DD +F + +P++ T N M+ + S+A LF + S
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS------- 559
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
P+ TY+ ++ AH E D TK A L+ E R G
Sbjct: 560 ------PNGCTYNILIR----AHLGEG---------------DATKSAKLIEEIKRCG 592
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 138/335 (41%), Gaps = 27/335 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P L+ ++ + + + Q+ V + KQ+ G+ + T + + + K L
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G +T+ L+ EG+++EA+ V M + G T L LC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK------DHC 485
NG+ DA+L+++++ +P E+T+ ++ G + + + M+ D
Sbjct: 190 NGKVSDAVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL------SG---DGAPL--- 533
+ +I ++ + K S ++ F+ E+ + +A+ YT L +G DGA L
Sbjct: 249 KYSI-IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 534 ------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
PD +S++++ + E ++K M G D + L+ + +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
H D ++ G P+ F +LI ++N
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFN-ILINGYCKAN 401
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ + G+ A +F M+ + PDI +Y + L G ++ +++ E++
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ +E D+ +YN +++ + + + +F L G+KP
Sbjct: 484 EKSK---------------MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + + + G FRKM + G + TY +L+RA EG ++ + +
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAML 440
++ G AS ++ + ++GR + + L
Sbjct: 589 KRCGFSVDAST-VKMVVDMLSDGRLKKSFL 617
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 181/465 (38%), Gaps = 57/465 (12%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K G +A +FN M++ + PD+ Y+S+ L + + + +
Sbjct: 244 KQGEVSKACNLFNEMVQK-GVVPDVGTYNSIVDAL---------------CKARAMDKAE 287
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ R+ D +EPD V YNA+++ S WK +F+++ GL P T+ M +
Sbjct: 288 FVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSL 347
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ G+ E F+ M G ++Y +L+ + EG+ + +M +G+V
Sbjct: 348 CKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNC 407
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
L G +AMLV +++ + +P +T++ LI + G + D + F
Sbjct: 408 HCINILISAHAKRGMMDEAMLVFTEMQG-QGVRPNVVTYSTLISAFCRMGRLADAMEKFS 466
Query: 480 HMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT-----RAN----SSGYTFLSGD 529
M EPN ++++ + + KAKE E R N SS L +
Sbjct: 467 QMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIE 526
Query: 530 GAPL--------------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
G + +P T++S+++ + E V M G + D +
Sbjct: 527 GRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTN 586
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
L+ ++GK ++ G I F EML + + + + L +
Sbjct: 587 NTLVSGYCKSGK-----------IDDGLI----LFREMLHKKVKPTTVTYNIVLDGLLRA 631
Query: 636 APFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITV 680
++ + E+ +S + D + LL LC + IT+
Sbjct: 632 GRTSAAKKMFHEMIDSGT-AVDIDTYKILLKGLCRNDLTDEAITL 675
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 133/316 (42%), Gaps = 28/316 (8%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T L L A R EA+ + + + + PD +Y++V +L +E + +++RM
Sbjct: 163 TTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMA 222
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
++ + PD+V +N V++ + +F ++ + G+ P T
Sbjct: 223 KEGGR-------------CSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGT 269
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y ++ + ++ D R+M G +TY ++ + G E+ R M
Sbjct: 270 YNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMT 329
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+G++ + LC +GR +DA + + + + H P ++++ L+ G
Sbjct: 330 SKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGH-MPDIVSYSILLHGYATEGRF 388
Query: 472 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
D ++F M D N +N ++ +++ M +A +F E + G G
Sbjct: 389 ADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTE-----------MQGQG 437
Query: 531 APLKPDEYTYSSMLEA 546
++P+ TYS+++ A
Sbjct: 438 --VRPNVVTYSTLISA 451
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
++ ++ L GR +A +FNL++ + P I ++S+ VG +++ +++ M
Sbjct: 516 FSSIIHSLCIEGRVMDAQDVFNLVIHIGD-RPTIVTFNSLIDGYCLVGKMEKAFGVLDAM 574
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+EPD+V N +++ S + +F+++ +KP+
Sbjct: 575 VSVG---------------IEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV 619
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
TY + ++ +L++G+ + F +M SG A+ TYK+L++ +EA+
Sbjct: 620 TYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAIT 674
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/450 (18%), Positives = 175/450 (38%), Gaps = 46/450 (10%)
Query: 187 MFTEGQMLK------LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M T+G M LL G +G + ++ + + DK + + L++ K
Sbjct: 363 MTTKGHMPDIVSYSILLHGYATEGRFADMNNLF---HSMADKGIVSNCHCINILISAHAK 419
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G EA+ +F M + + P++ Y ++ ++G L +E+ Q S I
Sbjct: 420 RGMMDEAMLVFTEM-QGQGVRPNVVTYSTLISAFCRMG---RLADAMEKFSQMISIGI-- 473
Query: 301 MHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
EP+ VY+++++ C+ K ++ + + K +P+ + + +
Sbjct: 474 ----------EPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSL 523
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
G+ + F + G+ +T+ L+ + GK+ +A + M G+
Sbjct: 524 CIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDV 583
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
L C +G+ D +++ ++ + KP +T+ ++ + G +F
Sbjct: 584 VTNNTLVSGYCKSGKIDDGLILFREMLH-KKVKPTTVTYNIVLDGLLRAGRTSAAKKMFH 642
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M D +I T +LK RND+ +A LF + + K D
Sbjct: 643 EMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC-------------KFDIT 689
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
++M+ A + E ++ ++ SG + + + ++ + G + F S+
Sbjct: 690 ILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSM 749
Query: 599 LEAGEIPHPLFFTE---MLIQA--IVQSNY 623
++G P + ML+Q IV++ Y
Sbjct: 750 EKSGCAPSSRLLNDIIRMLLQKGDIVKAGY 779
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 132/306 (43%), Gaps = 15/306 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P + N +L V + V+ FK++ + P +T+ + + V+ GK
Sbjct: 129 FNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAG 188
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+KM +SG +TY ++ + ++G+ A+ + M +G+ A Y L L
Sbjct: 189 YLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDL 248
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C N R L+++K++ R P EIT+ +I + G I IFQ M + PN
Sbjct: 249 CKNNRSAKGYLLLKKMRK-RMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPN 307
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T NA++ + + F +A + E + G KP+E +YS++L
Sbjct: 308 CVTYNALIDGHCHDGNFEQALTILE-----------MMEATGP--KPNEVSYSALLNGLC 354
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
++E + + + M ++G + + ++ R G + D +L+ G +P +
Sbjct: 355 RHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVV 414
Query: 609 FFTEML 614
F+ ++
Sbjct: 415 TFSVLI 420
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/427 (18%), Positives = 172/427 (40%), Gaps = 67/427 (15%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD++ ++ + L G LK+ L+++M + P +V YN VL
Sbjct: 166 PDVSTFNILINVLCVEGKLKKAGYLLKKMEESG---------------YVPSVVTYNTVL 210
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N ++K + Q+ G++ A TY + ++ + ++ + + +KM K +
Sbjct: 211 NWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMIS 270
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+TY ++ F +EGKI A + M ++ Y L C++G ++ A+ +
Sbjct: 271 PNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTI 330
Query: 442 VEKIKSLRHSKPLEITFT-------------------------GLIISS------MDG-- 468
+E +++ KP E++++ G+I+ +DG
Sbjct: 331 LEMMEA-TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLC 389
Query: 469 --GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G +++ + + M KD P++ T + ++ + R KE+ + +A
Sbjct: 390 RNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG------ 443
Query: 526 LSGDGAPLKPDEYTYSSML-EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
L P+ Y++++ T E F+ VY M+ G + L+ +
Sbjct: 444 -------LAPNSIIYTTLIYNYCKTGDVVEAFK-VYVAMSRIGYDANCFICNVLVSSLCK 495
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
GK + E+ F + + G +P+ + F ++ N KA ++ + M A H +
Sbjct: 496 DGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFT 555
Query: 645 WTELFES 651
+ L ++
Sbjct: 556 YGGLLKA 562
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/319 (18%), Positives = 130/319 (40%), Gaps = 24/319 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P+ V YNA+++ ++ + + + +G KP+ +Y + + + K++L
Sbjct: 304 LLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSK 363
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M +G +G + Y ++ G +NE+V + M + GVV + L
Sbjct: 364 SILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGF 423
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C G+ ++ ++ K+ + P I +T LI + G + + ++ M + + N
Sbjct: 424 CRVGKIKNVKEIICKMYKAGLA-PNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDAN 482
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRA----NSSGYTFL------SGDG-------- 530
N ++ ++ A+ F ++ NS + + SG+G
Sbjct: 483 CFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFD 542
Query: 531 ----APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
A P +TY +L+A A +++ + + + +D + +LVE ++G
Sbjct: 543 EMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSG 602
Query: 587 KCHLLEHAFDSLLEAGEIP 605
FD +++ +P
Sbjct: 603 MLTDAVALFDEMVQRNVLP 621
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 16/271 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ + ++ ++N S F +F ++ K+G PS TYG ++ + ++GK+
Sbjct: 516 PNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRL 575
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ A+ +TY ++ ++ G + +AVA M QR V+ + Y + L
Sbjct: 576 LDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIR 635
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNI 489
G+ A+ + P ++ +T + G + + M+ + C I
Sbjct: 636 RGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLI 695
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N +L YSR +KA ++F + G + P TY+ +L A
Sbjct: 696 AT-NVILNGYSRMGKMAKAGDIFT------------MMWSGITISPSLATYNILLHGYAK 742
Query: 550 AHQWEYFEYVYKGMALSGCQLDQ-TKHAWLL 579
+Y M +G D+ T H+ +L
Sbjct: 743 KKNLSKCSNLYNIMMRTGIFPDKLTCHSLIL 773
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 137/330 (41%), Gaps = 16/330 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLV 368
+ P+ YN V+N + + V K++R + P TY + + G+ D
Sbjct: 37 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 96
Query: 369 HEFFRKMA-KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
E R+M + G A +TY +V +GK++ A VR M+ +GV + L
Sbjct: 97 CEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 156
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
CN + +A+ + ++I + KP +T+T LI G+++ + + M+ C
Sbjct: 157 GWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCV 216
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ T +++L + +A +LF R S G P+ TY++++
Sbjct: 217 PNVVTYSSLLHGLCKAGDLDQALDLFR---RMTSKGCV----------PNVVTYTTLIHG 263
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
AH+ + + M + C D + LL R G+ + F + +P
Sbjct: 264 LCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPD 323
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
+ +T ++ S E+A L+ M A
Sbjct: 324 RITYTCLVRGFCNASRLEEARFLLENMKTA 353
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/430 (19%), Positives = 166/430 (38%), Gaps = 58/430 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ L KA +A + M + ++ PD+ Y +V + G + +++ M
Sbjct: 44 YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM 103
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + PD+V Y +V++ + + ++++ G++P
Sbjct: 104 VTRDG--------------IAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKF 149
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGE-AIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ + + K D + ++++ S +TY L+ F + G + +A+ +
Sbjct: 150 TFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGV 209
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME R V Y L LC G A+ + ++ S + P +T+T LI
Sbjct: 210 MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS-KGCVPNVVTYTTLIHGLCAAH 268
Query: 470 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+D + M C P+ + NA+L Y R +AK+LF+E +
Sbjct: 269 KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSC-------- 320
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM-ALSGCQLDQTKHAWLLVEASRAGK 587
PD TY+ ++ A + E ++ + M +G D ++ ++ SRA +
Sbjct: 321 -----LPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 375
Query: 588 CHLLEHA---------------------FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
+E A D L +AG + H + +++ +V E +
Sbjct: 376 --FVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAM----EVLKNMVNKRVEPS 429
Query: 627 VALINAMAYA 636
V N++ A
Sbjct: 430 VGTFNSVIGA 439
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/437 (18%), Positives = 164/437 (37%), Gaps = 90/437 (20%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+F ++ L+ A + EAL+++ +L + PD+ Y ++ + G L++ +K++
Sbjct: 148 KFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKML 207
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
M + P++V Y+++L+ + +F+++ G P
Sbjct: 208 GVMEGRKCV---------------PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVP 252
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + + + K D +M + ++Y L+ + G+I EA
Sbjct: 253 NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLF 312
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS-------------------- 447
+ M + + Y L CN R ++A ++E +K+
Sbjct: 313 KEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSR 372
Query: 448 ---------------LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 491
R+ P +T++ LI G +D + + ++M + EP++GT
Sbjct: 373 AKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGT 432
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N+++ R +A +L ++ G L+P TY+++LE +
Sbjct: 433 FNSVIGALCRLGDMDEAWKLL-----------VAMAAHG--LEPGMVTYTTLLEGFSRTG 479
Query: 552 Q----WEYFEYV------------------YKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+ +E FE + + + C+ + A +VE R+ +C
Sbjct: 480 RMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECE 539
Query: 590 LLEH----AFDSLLEAG 602
E D LL AG
Sbjct: 540 PAEEDCLAIVDGLLRAG 556
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 91/244 (37%), Gaps = 23/244 (9%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ K L R YT L+ A R EA + M + PD+ Y V +
Sbjct: 315 MATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 374
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
E + I+ M + + P+ V Y+++++ + + V K
Sbjct: 375 RFVEAAEFIQEMIARN---------------VAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+ ++PS T+ + + + G D + MA G G +TY L+ F G
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479
Query: 399 KINEAVAAVRNMEQRGVVGTAS-------VYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
++ A M ++ +++ + L LC AM VVE+++S R
Sbjct: 480 RMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRS-REC 538
Query: 452 KPLE 455
+P E
Sbjct: 539 EPAE 542
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD+V YNAVL + +W V + +++ + P+ T+ + + ++G ++ VHE
Sbjct: 261 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 320
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+M + G Y ++ +EG + A + M G+ Y L LC
Sbjct: 321 VLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLC 380
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ RW++ ++ ++ PL ++TF L+ G +D I + + M +H C P+
Sbjct: 381 SAERWEETEELLAEM--FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPD 438
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T ++ + + + +A L + T KP+ +Y+ +L+
Sbjct: 439 VITYTTVINGFCKEGLIDEAVMLLKSMTACGC-------------KPNTISYTIVLKGLC 485
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIP 605
+A +W E + M GC L+ L+ + G L+E A + L L G P
Sbjct: 486 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKG---LVEQAIELLKQMLVNGCSP 542
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ ++ ++ ++A+ L+N M
Sbjct: 543 DLISYSTVIDGLGKAGKTDEALELLNVMV 571
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 170/415 (40%), Gaps = 59/415 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG---RPHEALRIFN 252
+LKGL W +++ + + ++ + + L++ L + G R HE L
Sbjct: 270 VLKGLCMAKRWGCVQELMEEMVRMACPPNIVT---FNTLISYLCRNGLFERVHEVLA--Q 324
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
++ C PDI Y ++ + + G L+ +++ RM PS +K P
Sbjct: 325 MVEHGCT--PDIRMYATIIDGICKEGHLEVAHEILNRM---PSYGLK------------P 367
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
++V YN +L + +W+ + ++ T+ + ++ Q+G D V E
Sbjct: 368 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 427
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M + G +TY ++ F +EG I+EAV +++M G Y + LC+
Sbjct: 428 EQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSA 487
Query: 433 GRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
RW DA ++ ++ ++ PL ITF LI G ++ I + + M + C P++
Sbjct: 488 ERWVDAEDLMSQM--IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 545
Query: 491 TVNAMLKVYSRNDMFSKAKELF--------EETTRANSSGYTFLSGDG------------ 530
+ + ++ + +A EL T SS + LS +G
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 605
Query: 531 --APLKPDEYTY----SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++ D Y SS+ + T E+ Y M SGC +++ + L+
Sbjct: 606 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAY----MVSSGCVPNESTYTILI 656
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 128/319 (40%), Gaps = 47/319 (14%)
Query: 116 LKEMFEKDLNWVLDDDVQLG--SDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAK 173
L EMF+KD DDV D+F +N + + L++++ E
Sbjct: 392 LAEMFDKDCPL---DDVTFNILVDFFCQN----------GLVDRVIELLEQMLEHGCMPD 438
Query: 174 NWKFVRIMN---QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK---DKRDLKS 227
+ ++N + GL+ +LK + G K + VL + + D DL S
Sbjct: 439 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMS 498
Query: 228 RFV----------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + + L+ L K G +A+ + ML + PD+ +Y +V LG+
Sbjct: 499 QMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTVIDGLGKA 557
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G E ++L+ M K + P+ ++Y+++ +A + V +F
Sbjct: 558 GKTDEALELLNVMVNKG---------------MSPNTIIYSSIASALSREGRINKVIQMF 602
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
++ + ++ A Y + + + G+ + EF M SG TY +L+R E
Sbjct: 603 DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 662
Query: 398 GKINEAVAAVRNMEQRGVV 416
G + EA + + +G +
Sbjct: 663 GFVKEAQEMLTELCSKGAL 681
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 126/325 (38%), Gaps = 15/325 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P+ Y V+ A + V ++ + G P Y + +E + G +
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ G A+ +++ A ++G ++EA+ +R++ G Y + L
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C RW ++E++ + P +TF LI G + + M +H C P+
Sbjct: 275 CMAKRWGCVQELMEEMVRMA-CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 333
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I ++ + A E+ R S G LKP+ Y+++L+
Sbjct: 334 IRMYATIIDGICKEGHLEVAHEILN---RMPSYG----------LKPNVVCYNTLLKGLC 380
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+A +WE E + M C LD L+ + G + + +LE G +P +
Sbjct: 381 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI 440
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM 633
+T ++ + ++AV L+ +M
Sbjct: 441 TYTTVINGFCKEGLIDEAVMLLKSM 465
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 171/416 (41%), Gaps = 67/416 (16%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E+ ++PD+ Y+++ + GLL+E +L++ M K L+P +
Sbjct: 123 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG---------------LKPCV 167
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YNA++N + ++ V ++ K G+ P ATY + + ++ F +
Sbjct: 168 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 227
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G +++ L+ + G +++A+ R+M+ G+ +Y L C NG
Sbjct: 228 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 287
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTV 492
+A+ V +++ L L++ I++ + + + +F M + P+ T
Sbjct: 288 MSEALKVRDEM--LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 345
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ YS++ +KA LFE + N LKPD TY+++++ +
Sbjct: 346 TTLINGYSKDGNMNKAVTLFEMMIQRN-------------LKPDVVTYNTLIDGFCKGSE 392
Query: 553 WE--------------YFEYVYKGMALSG-CQLDQTKHAWLL--------VEAS------ 583
E Y ++ G+ ++G C + A+ L EA+
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 452
Query: 584 ------RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
RAG + ++L G +P + + ++ I + N ++A AL+N M
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 508
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 128/342 (37%), Gaps = 24/342 (7%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+V++ ++ V + + + F+ L+ GL S + +++ G DL E +++
Sbjct: 28 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ +SG + T +++ A + KI + + +ME++GV Y L C G
Sbjct: 88 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
++A +++ + S + KP T+ +I G + M K P+ T N
Sbjct: 148 LEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 206
Query: 494 AMLKVYSRNDMFSKAKELFEETTRAN--------SSGYTFLSGDG--------------A 531
+L RND A+ +F+E S+ LS +G A
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 266
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L PD Y+ ++ V M GC LD + +L +
Sbjct: 267 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ F + E G P FT ++ N KAV L M
Sbjct: 327 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 26/245 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK--ELVKL 286
+ +T L+ K G ++A+ +F +M++ NL PD+ Y+++ G K E+ K+
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLID-----GFCKGSEMEKV 396
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E S+RI P+ + Y ++N F ++ ++ + G +
Sbjct: 397 NELWNDMISRRIY------------PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 444
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
+ T ++ ++G EF M G +TY L+ F +E ++ A A
Sbjct: 445 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 504
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
V ME G++ Y + GR Q+A L++ K+ R P T+T LI
Sbjct: 505 VNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE-RGVNPDRSTYTSLI---- 559
Query: 467 DGGHI 471
GH+
Sbjct: 560 -NGHV 563
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 134/342 (39%), Gaps = 39/342 (11%)
Query: 219 LKDKRDLKS------RFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVA 271
LK RD+K+ +YT L+ + G EAL++ + MLE C L D+ Y+++
Sbjct: 257 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL--DVVTYNTIL 314
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
L + +L E +L M ++ + PD + ++N
Sbjct: 315 NGLCKEKMLSEADELFTEMTERG---------------VFPDFYTFTTLINGYSKDGNMN 359
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+F+ + + LKP TY ++ + + + V+E + M ++Y +L+
Sbjct: 360 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 419
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ G ++EA M ++G T + C G A + + L+
Sbjct: 420 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML-LKGI 478
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 510
P IT+ LI + ++D ++ M++ P++ T N +L +SR +A+
Sbjct: 479 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 538
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ + + PD TY+S++ T +
Sbjct: 539 IMLKMIERG-------------VNPDRSTYTSLINGHVTQNN 567
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 92/242 (38%), Gaps = 26/242 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ G G+ +A+++ + + +R+LK V Y L+ K + ++N M
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMI----QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 403
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-------PSKRIKNMHRKNWD 307
+ +YP+ +Y + +G + E +L + M +K I + + +
Sbjct: 404 ISR-RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 462
Query: 308 PV-------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
V + PD + YN ++N + F + ++ SGL P TY +
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 522
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + G+ KM + G TY L+ + + EA M QRG
Sbjct: 523 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 582
Query: 415 VV 416
V
Sbjct: 583 FV 584
>gi|299116347|emb|CBN76149.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 147/365 (40%), Gaps = 28/365 (7%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E + PD+ Y+S+ L G +++++ M+ K + PD+
Sbjct: 571 MERRGVEPDVVTYNSLINVLRWGGQRDRALEILD-----------GMNAKGGAGGVRPDV 619
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ YN+ + AC + K + ++R+ GLKP +Y A+ ++G + R
Sbjct: 620 ITYNSAIAACASGGESKKASQLIGEMRRKGLKPDRYSYTSAIHACSKAGNPEEALRLLRA 679
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M S + + A GK +EA+ + M +GV Y G+
Sbjct: 680 MEASNVVPDVIAMTACMDALAAGGKWSEAITILDEMRSKGVTPNERTYKAAIQACGRGGQ 739
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-----HCEPNI 489
WQ A+ ++ ++++ R S + +++ + GG +++ + MK + P++
Sbjct: 740 WQRALELLSRLEN-RASGATVQEYNCAMMACVTGGESGRALALLEQMKANKGGVNAGPDM 798
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T + + S + +A L +E A G +P+ +Y++ + A
Sbjct: 799 VTYTSAIMACSSTGKWDRALSLLDEMREA-----------GPRTQPNIRSYTAAIAACGR 847
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A +WE ++ + G D ++ A R G+ L S++EAG P +
Sbjct: 848 ARKWEEAVALHSKLLEEGMSPDPASFNAVIRAARRGGQHKLSMKLLASMVEAGLTPDGVT 907
Query: 610 FTEML 614
E++
Sbjct: 908 VGELI 912
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 107/277 (38%), Gaps = 62/277 (22%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R+ YT + KAG P EALR+ M E N+ PD+ A + L G E + ++
Sbjct: 654 RYSYTSAIHACSKAGNPEEALRLLRAM-EASNVVPDVIAMTACMDALAAGGKWSEAITIL 712
Query: 288 ERMRQK---PSKR-----IKNMHRKN-WDPVLE--------------------------- 311
+ MR K P++R I+ R W LE
Sbjct: 713 DEMRSKGVTPNERTYKAAIQACGRGGQWQRALELLSRLENRASGATVQEYNCAMMACVTG 772
Query: 312 -----------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG--LK 346
PD+V Y + + AC + +W + ++R++G +
Sbjct: 773 GESGRALALLEQMKANKGGVNAGPDMVTYTSAIMACSSTGKWDRALSLLDEMREAGPRTQ 832
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ +Y A+ ++ K++ K+ + G + ++ ++RA G+ ++
Sbjct: 833 PNIRSYTAAIAACGRARKWEEAVALHSKLLEEGMSPDPASFNAVIRAARRGGQHKLSMKL 892
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+ +M + G+ EL L + GRW DA VVE
Sbjct: 893 LASMVEAGLTPDGVTVGELISSLSDRGRWDDAQRVVE 929
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/241 (18%), Positives = 93/241 (38%), Gaps = 13/241 (5%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M G+ E ++ G G W++A+ +L + ++ G+
Sbjct: 715 MRSKGVTPNERTYKAAIQACGRGGQWQRALELLSRLENRASGATVQEYNCAMMACVTGGE 774
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
+GR L N PD+ Y S + G + L++ MR+
Sbjct: 775 SGRALALLEQMKANKGGVNAGPDMVTYTSAIMACSSTGKWDRALSLLDEMREA------- 827
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
P +P++ Y A + AC + +W+ + +L + G+ P A++ +
Sbjct: 828 ------GPRTQPNIRSYTAAIAACGRARKWEEAVALHSKLLEEGMSPDPASFNAVIRAAR 881
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ G++ L + M ++G +T L+ + + G+ ++A V E+ G + +S
Sbjct: 882 RGGQHKLSMKLLASMVEAGLTPDGVTVGELISSLSDRGRWDDAQRVVEIAEKTGAIPASS 941
Query: 421 V 421
+
Sbjct: 942 L 942
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/346 (18%), Positives = 138/346 (39%), Gaps = 46/346 (13%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM----------------- 359
+ AVL+AC + +W V +++ ++G+ P + +
Sbjct: 496 FMAVLSACSKAGRWGSALSVLREMDRAGVTPETVAFNTVLAAFEHRAHSGGSSSGGGAAK 555
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++ ++ + E M + G +TY L+ G+ + A+ + M +G G
Sbjct: 556 REAPRWPMALELLADMERRGVEPDVVTYNSLINVLRWGGQRDRALEILDGMNAKGGAGGV 615
Query: 420 S---VYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDC 474
+ Y A C +G ++ + I +R KP ++T I + G+ ++
Sbjct: 616 RPDVITYNSAIAACASG--GESKKASQLIGEMRRKGLKPDRYSYTSAIHACSKAGNPEEA 673
Query: 475 ISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+ + + M+ + P++ + A + + +S+A + +E S G T
Sbjct: 674 LRLLRAMEASNVVPDVIAMTACMDALAAGGKWSEAITILDEM---RSKGVT--------- 721
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMA--LSGCQLDQTKHAWL-LVEASRAGKC-H 589
P+E TY + ++A QW+ + + SG + + A + V +G+
Sbjct: 722 -PNERTYKAAIQACGRGGQWQRALELLSRLENRASGATVQEYNCAMMACVTGGESGRALA 780
Query: 590 LLEH--AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
LLE A + AG P + +T ++ +++A++L++ M
Sbjct: 781 LLEQMKANKGGVNAG--PDMVTYTSAIMACSSTGKWDRALSLLDEM 824
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 149/354 (42%), Gaps = 23/354 (6%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T L++ LG AGR EA +F + P AY+++ ++ LK ++++ M
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMS 326
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
Q + PD Y+ +++A + +W+ + K++ G+KPS+
Sbjct: 327 QC---------------GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYV 371
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
+ + G + R+M SG Y V++ F + + A+ A M
Sbjct: 372 FSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMR 431
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+ G+ + L C GR A + E+++ + P T+ +I + H
Sbjct: 432 EEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRE-SNCPPGTTTYNIMINLLGEQEHW 490
Query: 472 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYTFL 526
+ ++ MK+ PNI T ++ VY R+ + +A + E + + + + Y L
Sbjct: 491 EGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHAL 550
Query: 527 SGDGAP--LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
A L+PD TY+++++A Q++ +Y+ M SGC D+ A L
Sbjct: 551 VNAYAQRGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAML 604
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 117/291 (40%), Gaps = 32/291 (10%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL + + D
Sbjct: 347 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD--- 403
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ FN M E+ + PD+ ++++ + G +L
Sbjct: 404 RHFYNVMIDTFGKYNCLGHAMDAFNKMREE-GIEPDVVTWNTLIDAHCKGGRHDRAAELF 462
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E MR+ P YN ++N W+GV + ++++ GL P
Sbjct: 463 EEMRESNCP---------------PGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVP 507
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA-- 405
+ TY ++V +SG+Y + M G Y LV A+ + G + +
Sbjct: 508 NIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLRPDVITYT 567
Query: 406 ----AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
A+ +EQ V +Y E+ C R AML +K ++H +
Sbjct: 568 TLMKALIRVEQFDKVPV--IYEEMITSGCAPDRKARAML-RSGLKYIKHMR 615
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 24/281 (8%)
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+KP Y ++ ++ + +M++ G A TY +LV A+ G+ A
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
++ ME GV ++ V+ + + G WQ A V+ ++++ +P + F ++I
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA-SGVRP-DRHFYNVMID 412
Query: 465 SMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+ GH D F M++ EP++ T N ++ + + +A ELFEE +N
Sbjct: 413 TFGKYNCLGHAMDA---FNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
P TY+ M+ WE E + M G + + L+
Sbjct: 470 C-------------PPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLV 516
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
R+G+ +++ G P P + L+ A Q
Sbjct: 517 DVYGRSGRYKEAIDCIEAMKADGLKPSPTMY-HALVNAYAQ 556
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 97/549 (17%), Positives = 222/549 (40%), Gaps = 43/549 (7%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
V+ DV G + + W +KR ++ + L+ L E + WK ++ M +S
Sbjct: 96 VMKTDV--GVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSP 153
Query: 186 L-MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+ + T ++ ++++ LG+ +A+++ Y +K ++ + Y ++ +L G+
Sbjct: 154 ICVVTPMELSQVIRMLGNAKMIGKAITIF---YQIKARKCQPTAQAYNSMIIMLIHEGQY 210
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM 301
+ ++N M + + PD Y ++ ++G ++L+ M++ +P+ +I M
Sbjct: 211 EKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTM 270
Query: 302 ------HRKNWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
N L PD+ Y ++ + + + + ++++ G
Sbjct: 271 IISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREG 330
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEA 403
KP + + ++G+ D + F +M S +TY +++A +E + +++E
Sbjct: 331 CKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEV 390
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ M+ G+ + Y L C R + AM+++E++ + P + LI
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE-KGFPPCPAAYCSLID 449
Query: 464 SSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSG 522
+ D +FQ +K++C + V A M+K + A LF+E ++ +
Sbjct: 450 ALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCT- 508
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
P+ Y Y++++ A A + + M GC D + +L
Sbjct: 509 ------------PNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGL 556
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE 642
++ G H ++ + P + + +L +E+A L+ M F
Sbjct: 557 AKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDL 616
Query: 643 RQWTELFES 651
++ + E+
Sbjct: 617 ITYSSILEA 625
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 161/373 (43%), Gaps = 52/373 (13%)
Query: 213 LDWVYG----LKDKRDLKSR---FVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDI 264
LD V+G ++ R + R F YT+L+ LGKAGR EA ++ M E C PD
Sbjct: 278 LDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCK--PDT 335
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN------------------W 306
+++ LG+ G L + +KL E M S I N+ N W
Sbjct: 336 VVMNNMINFLGKAGRLDDGLKLFEEM--GVSHCIPNVVTYNTIIKALFESKSRVSEVFSW 393
Query: 307 -----DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
+ P Y+ +++ +++ + + +++ + G P A Y ++ + +
Sbjct: 394 FERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+ +YDL E F+++ ++ + A Y V+++ + G++++A+ M + G
Sbjct: 454 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYA 513
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQH 480
Y L L +A+ + K++ H +I +I++ + G + + +
Sbjct: 514 YNALMSGLARACMLDEALTTMRKMQ--EHGCLPDINSYNIILNGLAKTGGPHRAMEMLTN 571
Query: 481 MKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
MK+ +P+ + N +L S MF +A EL +E N+ G+ + D T
Sbjct: 572 MKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM---NALGFEY----------DLIT 618
Query: 540 YSSMLEASATAHQ 552
YSS+LEA Q
Sbjct: 619 YSSILEAIGKVDQ 631
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 22/243 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ---EL 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ LGKAGR +A+ +F+ M P++ AY+++ L + +
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEM-SKLGCTPNVYAYNALMSGLARACM 526
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E + + +M++ PD+ YN +LN + +
Sbjct: 527 LDEALTTMRKMQEHGCL---------------PDINSYNIILNGLAKTGGPHRAMEMLTN 571
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ S +KP A +Y + + +G ++ E ++M G +TY ++ A GK
Sbjct: 572 MKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAI---GK 628
Query: 400 INE 402
+++
Sbjct: 629 VDQ 631
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 146/353 (41%), Gaps = 31/353 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ L K GR EA +IF+ M++ + P+ A Y ++ G L ++ L++
Sbjct: 309 FTYNTLMGYLCKNGRSMEARKIFDSMVKRGH-KPNSATYGTLLHGYATEGSLVKMHHLLD 367
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M ++N ++PD ++N ++ + +F ++R+ GL P
Sbjct: 368 MM-------VRNG--------IQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPD 412
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TYG+ M+ + GK D F ++ G A+ ++ L+ K ++A
Sbjct: 413 TVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAV 472
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M RG+ + L LC G A + + + + + + IT+ LI
Sbjct: 473 EMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV-ITYNTLIDGYCLH 531
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G +D+ + + M D +PN T N M+ Y +N A LF + S G
Sbjct: 532 GKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMA---SKG----- 583
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
+ P TYS++L+ A + + +Y M SG + D + +L+
Sbjct: 584 -----VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILL 631
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 113/571 (19%), Positives = 230/571 (40%), Gaps = 95/571 (16%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKF-VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
W +EA L+ L +++ T++ +R M G LLKGL D+ +QA
Sbjct: 122 WTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQA 181
Query: 210 MSVLDWVYGLKDKR-----DLKSRFVYTKLLAILGKAGRPHE-ALRIFNLMLEDCNLYPD 263
+ +L + D R D+ S Y ++ L + GR + A +F+ ML D L PD
Sbjct: 182 LHLLHTMMVADDTRGGYPPDVVS---YNTVINGLLREGRQLDTAYHLFDQML-DQGLSPD 237
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y+S+ L + + + ++ RM + + P+ + +N++L+
Sbjct: 238 VVTYNSIISALSKARAMDKAAVVLVRMVKNGAM---------------PNRITHNSLLHG 282
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
S + VFK++ + G++P TY M + ++G+ + F M K G
Sbjct: 283 YCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPN 342
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+ TY L+ + EG + + + M + G+ ++ L +G+ DAML+
Sbjct: 343 SATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFS 402
Query: 444 KIKSLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHM--------------------- 481
K++ + P +T+ G+++ ++ G +DD ++ F +
Sbjct: 403 KMRR-QGLNPDTVTY-GIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA 460
Query: 482 ----------------KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS----- 520
+ C NI N +L + M ++AK +F+ R +
Sbjct: 461 RDKWDKAEELAVEMIGRGICPNNI-FFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVI 519
Query: 521 ------SGYT----------FLSG---DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
GY L G DG +KP+E TY++M+ + E +++
Sbjct: 520 TYNTLIDGYCLHGKVDEAAKLLEGMVLDG--VKPNEVTYNTMINGYCKNGRIEDAFSLFR 577
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
MA G ++ +L +A + + + ++++G I + +++ + Q+
Sbjct: 578 QMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSG-IKFDIGTYNIILLGLCQN 636
Query: 622 N-YEKAVALINAMAYAPFHITERQWTELFES 651
N + A+ + + FH+ R + + ++
Sbjct: 637 NCTDDALRIFQNLYLIDFHLENRTFNIMIDA 667
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 118/277 (42%), Gaps = 20/277 (7%)
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ P+ TY + ++ + G DL ++ +SG A+T+ L++A ++ + +EA+
Sbjct: 87 VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146
Query: 405 -AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI---KSLRHSKPLEITFTG 460
A+R M G Y L LC+ R Q A+ ++ + R P ++
Sbjct: 147 DIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYN 206
Query: 461 LIISSM--DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
+I+ + +G +D +F M D P++ T N+++ S+ KA + +
Sbjct: 207 TVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVK 266
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+GA P+ T++S+L ++ + V+K M G + D +
Sbjct: 267 -----------NGA--MPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNT 313
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
L+ + G+ FDS+++ G P+ + +L
Sbjct: 314 LMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLL 350
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 182/436 (41%), Gaps = 38/436 (8%)
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD----LKS 227
AK F R + G E +++ LG R + ++V+ ++ K L
Sbjct: 109 AKALHFFRWVEAKGFTHNEQSYFLMIEILGRS---RNLNAARNFVFSIEKKSGGAVKLGD 165
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
RF + L+ G AG E++++F M ++ + P + ++S+ L ++
Sbjct: 166 RF-FNSLIRSYGWAGLFQESIKVFKTM-KEIGVSPSVVTFNSL------------LSIVL 211
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLK 346
+R R +K++ + + + PD +N ++ C+ S +G FW FK++ +
Sbjct: 212 KRGRTSMAKQLFDEMLDTYG--VTPDTYTFNILIRGFCMNSMVDEG-FWFFKEMSRFKCD 268
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG--ALTYKVLVRAFWEEGKINEAV 404
P TY ++ + ++GK + H + M K + +TY L+R + + + EA+
Sbjct: 269 PDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEAL 328
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ + M RG+ Y L LC + ++E + P T LI +
Sbjct: 329 SLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKA 388
Query: 465 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G +++ S+F+ M + +P+ T + +++ + F +A+E F+E
Sbjct: 389 HCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKE---- 444
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
L G KP Y+ M E + + + E V++ + G Q D + L++
Sbjct: 445 ILLHDVGC--KPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHC 501
Query: 584 RAGKCHLLEHAFDSLL 599
R G E FD L+
Sbjct: 502 REGT---PEAGFDLLV 514
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 116/285 (40%), Gaps = 31/285 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN--- 252
L+K G +A SV + + L+ + D + Y+ L+ L + G A F+
Sbjct: 385 LIKAHCTMGKLEEAFSVFEKMSELRVQPDSAT---YSVLVRSLCQRGDFRRAEEFFDELA 441
Query: 253 ---LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
++L D P +AAY+ + L G K+ ++ ++ M R DP
Sbjct: 442 EKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQL----------MKRGTQDPP 491
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L+ L C G + LR+ P A TYGL ++ +L+ G L H
Sbjct: 492 SYKTLI-----LGHCREGTPEAGFDLLVLMLRRD-FVPDAETYGLMIDGLLKKGDPVLAH 545
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG----TASVYYEL 425
+ KM KS + ++ A E+G +E+ + V+ M +R + + EL
Sbjct: 546 KSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEEL 605
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
LC + + +A ++ + SL + ++I +IS + H
Sbjct: 606 VSFLCQSRKLLEAQKML--LFSLEKRQSVDIDMCSTVISGLCKAH 648
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
F LI S G + I +F+ MK+ P++ T N++L + + S AK+LF+E
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
D + PD YT++ ++ + + +K M+ C D +
Sbjct: 228 ------------DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYN 275
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGE--IPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L+ RAGK + + +++ P+ + +T ++ ++ + +A++L+ M
Sbjct: 276 TLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMV 335
Query: 635 YAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
+ + L + + DK++++L +
Sbjct: 336 SRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM 369
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 171/454 (37%), Gaps = 54/454 (11%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG----L 279
D ++ YT L+A + EA + + M + + P A Y++V +
Sbjct: 164 DSRTALSYTSLIAAYARNALHEEARALLDQM-KAAGVAPTAATYNTVLAACARATDPPVP 222
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L+ L MR S P + PDL YN +L A + +
Sbjct: 223 FDMLLGLFAEMRHDVS------------PAVRPDLTTYNTLLAAAAVRSLNDQAEMLLRA 270
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ ++G+ P A+Y ++ ++G V E FR+MA +G Y L+ A G
Sbjct: 271 MLEAGVLPDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGA 330
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
EAVA +R M+ G TA+ Y L GR+ V E + +R + P +
Sbjct: 331 TAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDG---VRELFREMRTAVPPDTATY 387
Query: 460 GLIISSM-DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
++ S DGG + + +F M + EP++ T +L + + A+E+ + T+
Sbjct: 388 NVLFSVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHEDAREVLDYITK 447
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+ P Y+ ++EA A +E + M G +
Sbjct: 448 EG-------------MVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNS 494
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
L ++ G L + E F+ M A +Q N + ALI AY
Sbjct: 495 LANVFAKGG-----------LFQEAES----IFSRMTNSAGIQKNKDSFDALIE--AYCQ 537
Query: 638 FHITERQWTELFESNEDRISRDK--LEKLLNALC 669
+ E + R + D+ LE +LNA C
Sbjct: 538 GAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 571
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 178/454 (39%), Gaps = 53/454 (11%)
Query: 159 RVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
R +VD + ++ + R M +G L L++ G+ +A++VL
Sbjct: 284 RHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQ--- 340
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++ + Y LL + G+ GR +F M + PD A Y+ + G G
Sbjct: 341 MQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREM--RTAVPPDTATYNVLFSVFGDGG 398
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
KE+V+L M + +EPD+ VL AC + V
Sbjct: 399 FFKEVVELFHDMLRTG---------------IEPDMETCEGVLVACGQGGLHEDAREVLD 443
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+ K G+ P+A Y +E + + Y+ + F M + G TY L F + G
Sbjct: 444 YITKEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNSLANVFAKGG 503
Query: 399 KINEAVAAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
EA + M G+ + L C + DA+ +++ R + P E +
Sbjct: 504 LFQEAESIFSRMTNSAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFN-PDERS 562
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE-- 514
G++ + G ID+ F+ ++ + P+I ML +Y+RND ++ A +L EE
Sbjct: 563 LEGVLNAYCIAGVIDESKEQFEEIQSNMAVPSIIAYCMMLSLYARNDRWADAYDLLEEMK 622
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ----- 569
T RA+S+ A + EY SS W+ EY L GC
Sbjct: 623 TNRASSTHQVI-----ASMIQGEYDDSS---------NWQMVEYALDSSNLEGCDYSLRF 668
Query: 570 ----LDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
LD W + +RA + +L+HA +S L
Sbjct: 669 FNALLDVL---WWFGQKARAAR--VLDHAVNSGL 697
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P P + +YN +L +C + V W+ K + SG+ P T+ + + ++ SG D
Sbjct: 15 PENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDD 74
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
E F KM + G ++ +LVR + G ++ + + M + G VY L
Sbjct: 75 ARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLIS 134
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHC- 485
C G+ DA +V++++ S P +TF I + G + + IF+ M+ D
Sbjct: 135 SFCKEGKTDDAEKLVDEMRKDGLS-PDVVTFNARISALCSSGKVLEASRIFRDMQIDEVL 193
Query: 486 ---EPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+PNI T N ML + + M +A+ LFE+
Sbjct: 194 GLPQPNIITYNLMLGGFCKEGMLEEARALFEK 225
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 146/368 (39%), Gaps = 25/368 (6%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D L + + +R+M SG++ LL G G +A +VL +
Sbjct: 275 IVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMM-- 332
Query: 220 KDKRDLKSRFVYTK--LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
RD S YT LL L K GR EA + M E D + V L
Sbjct: 333 ---RDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEK-GYVIDTVTCNIVIDGLCNN 388
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE--------PDLVVYNAVLNACVPSHQ 329
G L + ++++ M S + N+ V + PDL+ Y+ +++ + +
Sbjct: 389 GKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGR 448
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
F ++ L+P +A Y + + + GK + M K G TY
Sbjct: 449 VGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNS 508
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ + +I E + M +RGV S+Y + LC GR +DA V++++ +
Sbjct: 509 LIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQ-K 567
Query: 450 HSKPLEITFTGLI---ISSMDGGHIDDCISIFQHMKDHCEPNIG-TVNAMLKVYSRNDMF 505
P +F+ LI + D +D+ I ++ H E T N +L
Sbjct: 568 GISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELL----VGGEV 623
Query: 506 SKAKELFE 513
KAKELFE
Sbjct: 624 VKAKELFE 631
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 102/485 (21%), Positives = 185/485 (38%), Gaps = 39/485 (8%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
PEK + +LV T+K + + M + G + L+ +G
Sbjct: 83 PEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKT 142
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYT--KLLAILGKAGRPHEALRIFNLMLEDCNL---Y 261
A ++D + ++D S V T ++ L +G+ EA RIF M D L
Sbjct: 143 DDAEKLVDEM-----RKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+I Y+ + + G+L+E L E+M K S+ + M+R++ YN L
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKM--KVSENL--MNRES-----------YNIWL 242
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V + V K++ G++P+ +Y + M+ + ++G R M SG
Sbjct: 243 LGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVL 302
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+TY L+ + GK++EA +R M + G L L GR +A +
Sbjct: 303 PDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEEL 362
Query: 442 VEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDHCEPNIGTV-NAMLKVY 499
++K+ ++ ++I + + G +D I I M H +G + N+ + +
Sbjct: 363 LQKMN--EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLV 420
Query: 500 SRNDMFSKA-KELFEETT---------RANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+D K +L +T R + F+ G L+PD Y + +
Sbjct: 421 DDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCK 480
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ V K M GC + L++ + + D + E G P
Sbjct: 481 EGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSI 540
Query: 610 FTEML 614
+ +L
Sbjct: 541 YNNVL 545
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 128/325 (39%), Gaps = 81/325 (24%)
Query: 164 RLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD--WVYG--- 218
R+SE E + ++ MN+ G + ++ GL + G +A+ +++ W +G
Sbjct: 355 RISEAE------ELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAA 408
Query: 219 ----------LKDKRDLKSRFV-----YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
L D D + + + Y+ +++ L KAGR EA + F M+ NL PD
Sbjct: 409 LGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGK-NLQPD 467
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR--------IKNMHRKN--------WD 307
A Y + + G + ++++ M +K + I + KN D
Sbjct: 468 SAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLID 527
Query: 308 PVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
+ E PD+ +YN VL++ + K V ++ + G+ P+ +++ + ++ ++
Sbjct: 528 EMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKAC 587
Query: 364 KYDLVHEFF------------------RKMAKSGEAI----------------GALTYKV 389
+ V E F ++ GE + G YK
Sbjct: 588 DFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKD 647
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRG 414
L+ ++ K+++A + + +G
Sbjct: 648 LIDHLCKDEKLDDASGILHKLIDKG 672
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 180/448 (40%), Gaps = 92/448 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
++ G G +AM L G+ L R +++ LG +GR EA IF M
Sbjct: 262 IIVGFAKAGDPNKAMEFL----GMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEM 317
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKP----------------- 294
+D L P AY+ + + G+LK+ +V +ER P
Sbjct: 318 -KDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGR 376
Query: 295 --SKRI--KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
S RI K M N + P+ V++ +L + +W+ F V K+++ SG++P
Sbjct: 377 WESARIVLKEMEANN----IMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRH 432
Query: 351 TYGLAMEV----------------MLQSGK-------------------YDLVHEFFRKM 375
Y + ++ ML G ++ E F +M
Sbjct: 433 FYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEM 492
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G + T+ +++ +F E+ + ++ + NM G++ Y L +GR+
Sbjct: 493 MEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRF 552
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
DA+ +E +KS KP + LI + G + ++ F+ M+ D +P++ +N+
Sbjct: 553 SDAIECLEDMKS-AGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNS 611
Query: 495 MLKVYSRN----DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
++ + + + FS K + E LKPD TY+++++A
Sbjct: 612 LINAFGEDRRDAEAFSVLKYMKEND-----------------LKPDVVTYTTLMKALIRV 654
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWL 578
++ VY+ M L+GC D+ A L
Sbjct: 655 DKFNKVPSVYEEMILAGCTPDRKARAML 682
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 141/367 (38%), Gaps = 64/367 (17%)
Query: 160 VLVDRLSEREMTAKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
+L+D S A W+ RI M + +M ++L D+G W+++ VL
Sbjct: 366 LLIDAYS----NAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLK- 420
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+K+ R Y ++ GK A+ F+ ML + + PD ++++
Sbjct: 421 --EMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSE-GIQPDTVTWNTLIDCHC 477
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
+ L + +L E M +K P + +N ++N+ +W V
Sbjct: 478 KAELHERAEELFEEMMEKG---------------FSPCVTTFNIMINSFGEQERWDDVKT 522
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ +R GL P+ TY +++ +SG++ E M +G + Y L+ A+
Sbjct: 523 LMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYA 582
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
++G +AV A R M + KP
Sbjct: 583 QKGLSEQAVNAFRLMRADSL------------------------------------KPSL 606
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+ LI + + + S+ ++MK++ +P++ T ++K R D F+K ++EE
Sbjct: 607 LALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEE 666
Query: 515 TTRANSS 521
A +
Sbjct: 667 MILAGCT 673
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 156/382 (40%), Gaps = 45/382 (11%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A +V+ W+ K +Y+ L+ LG++ + +EA L+ + L P Y+
Sbjct: 137 AYAVVSWLQ--KHNLCFSYELLYSILIHALGRSEKLYEAF----LLSQQQALSP--LTYN 188
Query: 269 SVAVTLGQVGLLKELVKLIERMRQK--PSKR------IKNMHRKNW--DPVL-------- 310
++ + L++ + LI RMRQ PS I+++ R N P+L
Sbjct: 189 ALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQ 248
Query: 311 ----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
E D+ + N ++ + ++ SGL P AT + + SG+
Sbjct: 249 CDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRII 308
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F +M +G Y L++ + + G + +A V ME+ GV Y L
Sbjct: 309 EAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLI 368
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 485
N GRW+ A +V++++++ + P F+ ++ S D G + + MK+
Sbjct: 369 DAYSNAGRWESARIVLKEMEA-NNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGV 427
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
P+ N M+ + + A + F++ S G ++PD T++++++
Sbjct: 428 RPDRHFYNVMIDTFGKFSCLDHAMDTFDKML---SEG----------IQPDTVTWNTLID 474
Query: 546 ASATAHQWEYFEYVYKGMALSG 567
A E E +++ M G
Sbjct: 475 CHCKAELHERAEELFEEMMEKG 496
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 133/320 (41%), Gaps = 17/320 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P AV++A S + +F++++ +GLKP Y ++ +++G
Sbjct: 287 LSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAE 346
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M +SG + TY +L+ A+ G+ A ++ ME ++ + V+ +
Sbjct: 347 FIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASY 406
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
+ G WQ + V++++K+ +P + +I + +D + F M + +P+
Sbjct: 407 RDRGEWQKSFQVLKEMKN-SGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPD 465
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T N ++ + + ++ +A+ELFEE S P T++ M+ +
Sbjct: 466 TVTWNTLIDCHCKAELHERAEELFEEMMEKGFS-------------PCVTTFNIMINSFG 512
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+W+ + + M G + + L+ ++G+ + + AG P
Sbjct: 513 EQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSST 572
Query: 609 FFTEMLIQAIVQSNY-EKAV 627
+ LI A Q E+AV
Sbjct: 573 MYNA-LINAYAQKGLSEQAV 591
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 136/360 (37%), Gaps = 77/360 (21%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K G+ EAL ++E N PD Y + L + L +E + + RMR
Sbjct: 280 LCKVGKWREALT----LMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL- 334
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
P++V Y+ +L C+ Q V + G PS + +
Sbjct: 335 --------------PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV-------------------------- 391
SG + ++ +KM K G G + Y +L+
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEML 440
Query: 392 ---------------RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
R GK +A + +R M +G + S Y ++ LCN + +
Sbjct: 441 ATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKME 500
Query: 437 DAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
A L+ E++K R ++ T+T ++ S G I+ F M++ C PN+ T A
Sbjct: 501 LAFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ Y + S A ELFE T LS +G P+ TYS++++ A Q E
Sbjct: 559 LIHAYLKAKKVSYANELFE----------TMLS-EGC--LPNIVTYSALIDGHCKAGQME 605
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 163/426 (38%), Gaps = 75/426 (17%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
KL+ GL + + +AM D++ ++ L + Y+ LL + R+ N+M
Sbjct: 307 KLISGLCEASLFEEAM---DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363
Query: 255 L-EDCNLYPDIAAYHSVAVTLGQVG-------LLKELVK------------LIERM---R 291
+ E C YP ++S+ G LLK++VK LI + +
Sbjct: 364 MMEGC--YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDK 421
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAV----LNACVPSH-QWKGVFWVFKQLRKSGLK 346
S + + K + +L VV N + C+ S +++ F V +++ G
Sbjct: 422 DSLSCHLLELAEKAYSEMLATG-VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P +TY + + + K +L F +M + G TY ++V +F + G I +A
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M + G P +T+T LI + +
Sbjct: 541 FNEMREVGCT------------------------------------PNVVTYTALIHAYL 564
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA----NSS 521
+ +F+ M + C PNI T +A++ + + KA ++FE + +
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVD 624
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
Y D +P+ Y ++L+ H+ E + M++ GC+ +Q + L+
Sbjct: 625 MYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 684
Query: 582 ASRAGK 587
+ GK
Sbjct: 685 LCKVGK 690
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 129/327 (39%), Gaps = 24/327 (7%)
Query: 316 VYNAVLNACVPSHQWKGVFWV----FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
V+ LN V + G F + +L+ +PS +TY ++ L++ D
Sbjct: 198 VFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLV 257
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
R+M+ + + T + + + GK EA+ ME V Y +L LC
Sbjct: 258 HREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCE 314
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNIG 490
+++AM + ++++ P +T++ L+ ++ + C + M + C P+
Sbjct: 315 ASLFEEAMDFLNRMRA-TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 373
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRA-NSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
N+++ Y + S A +L ++ + ++ GY + + D + S +
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGD--------KDSLS 425
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPH 606
H E E Y M +G L++ + AGK E AF + E G IP
Sbjct: 426 CHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGK---YEKAFSVIREMIGQGFIPD 482
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAM 633
++++L S E A L M
Sbjct: 483 TSTYSKVLGYLCNASKMELAFLLFEEM 509
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 32/266 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF--------------VYTKLLAILGKA 241
L+ G G +A + + + G KD D+ F +Y LL K
Sbjct: 594 LIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKL 653
Query: 242 GRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
R EA ++ + M +E C P+ Y ++ L +VG L E ++ +K
Sbjct: 654 HRVEEARKLLDAMSMEGCE--PNQIVYDALIDGLCKVGKLDE------------AQEVKA 699
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
++ P L Y+++++ + V ++ ++ P+ Y ++ +
Sbjct: 700 EMSEHGFPA---TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 756
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ GK D ++ + M + G +TY ++ F GKI + + M +GV
Sbjct: 757 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYV 816
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIK 446
Y L C NG A ++E++K
Sbjct: 817 TYRVLIDHCCKNGALDVAHNLLEEMK 842
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 178/436 (40%), Gaps = 40/436 (9%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
++R ++ L + + K + + M +SG+M ++ G G +
Sbjct: 116 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 175
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ L + + D+ + Y L+ L K GR EA +IF+ M + L P+I Y
Sbjct: 176 EAIVFLKKMRSDGVEPDVVT---YNSLMDYLCKNGRCTEARKIFDSMTKR-GLKPEITTY 231
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ G L E+ L++ M + + P+ V++ ++ A
Sbjct: 232 GTLLQGYATKGALVEMHGLLDLMVRNG---------------IHPNHYVFSILVCAYAKQ 276
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + VF ++R+ GL P+A TYG + ++ +SG+ + +F +M G + G + Y
Sbjct: 277 EKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 336
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ K A + M RG+ + + C GR ++ EK+
Sbjct: 337 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES----EKLFD 392
Query: 448 LR---HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRND 503
L KP IT++ LI G +D+ + M +P+ T + ++ Y +
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS 452
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
A LF E SSG + PD TY+ +L+ + + +Y G+
Sbjct: 453 RMKDALVLFRE---MESSG----------VSPDIITYNIILQGLFQTRRTAAAKELYVGI 499
Query: 564 ALSGCQLDQTKHAWLL 579
SG QL+ + + +L
Sbjct: 500 TKSGRQLELSTYNIIL 515
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/434 (19%), Positives = 163/434 (37%), Gaps = 69/434 (15%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLL 280
+R + F Y LL L R EAL + ++M +D + PD+ +Y +V + G L
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 281 -KELVKLIERMRQKPSKRIKNMHR--------KNWDPVLE-----------PDLVVYNAV 320
K E + Q+ S + + + D +E PD + YN++
Sbjct: 105 DKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 164
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
++ S Q K K++R G++P TY M+ + ++G+ + F M K G
Sbjct: 165 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 224
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
TY L++ + +G + E + M + G+ V+ L C + ++AML
Sbjct: 225 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 284
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYS 500
V K++ + P +T+ +I G ++D + F+ M D
Sbjct: 285 VFSKMRQ-QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE---------------- 327
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
L P Y+S++ T ++WE E +
Sbjct: 328 -------------------------------GLSPGNIVYNSLIHGLCTCNKWERAEELI 356
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M G L+ ++ + G+ E FD ++ G P + ++ ++ +
Sbjct: 357 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 416
Query: 621 SNYEKAVALINAMA 634
++A L+ +M
Sbjct: 417 GKMDEATKLLASMV 430
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 188/459 (40%), Gaps = 61/459 (13%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 199 LMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 258
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K + EA+ +F+ M + L P+ Y +V L + G
Sbjct: 259 IH-----PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ-GLNPNAVTYGAVIGILCKSG 312
Query: 279 LLKELVKLIERMRQK---PSKRIKN--MHR----KNWD-------PVLEPDLVVYNAVLN 322
+++ + E+M + P + N +H W+ +L+ + + N
Sbjct: 313 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 372
Query: 323 ACVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+ + SH +G +F + + G+KP TY ++ +GK D + M
Sbjct: 373 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 432
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G +TY L+ + + ++ +A+ R ME GV Y + L R A
Sbjct: 433 GMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 492
Query: 439 M-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHI-DDCISIFQHMKDHCEPNIG------ 490
L V KS R LE++ +I+ + + DD + +FQ++ C ++
Sbjct: 493 KELYVGITKSGRQ---LELSTYNIILHGLCKNKLTDDALRMFQNL---CLMDLKLEARTF 546
Query: 491 --TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
++A+LKV RND +AK+LF S +G L P+ +TY M E
Sbjct: 547 NIMIDALLKV-GRND---EAKDLF-----------VAFSSNG--LVPNYWTYRLMAENII 589
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
E + ++ M +GC +D +++ E + G+
Sbjct: 590 GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 628
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 172/430 (40%), Gaps = 37/430 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F Y ++ L K G + R+F + + + L PD+ Y+S+ G+VG L+E+ L
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLF-VQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 346
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
M+ D PD++ YN ++N + F F +++ +GLK
Sbjct: 347 FNEMK---------------DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 391
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ + G + F M ++G TY L+ A + G + EA
Sbjct: 392 PNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKL 451
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIIS 464
+ +M Q GV Y L LC GR +A E +S+ P + +T L+
Sbjct: 452 LNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE---EVFRSMLKDGISPNQQVYTALVHG 508
Query: 465 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ ++D + I + M + + +P++ +++ + + K + EE S
Sbjct: 509 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 568
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+S +++++A A + ++ M G + + L+
Sbjct: 569 PVIS-------------TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 615
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMAYAPFHITE 642
+AG L F +L G P+ +T LI + ++N E A L + M
Sbjct: 616 KAGIVELAVDYFCRMLSLGLQPNVAVYTS-LIDGLCKNNCIESAKKLFDEMQCRGMTPDI 674
Query: 643 RQWTELFESN 652
+T L + N
Sbjct: 675 TAFTALIDGN 684
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 124/299 (41%), Gaps = 15/299 (5%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F ++R P A + + + +SG LV +FF M +G A TY V++ +
Sbjct: 242 FSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCK 301
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
EG + + M + G+ Y L G ++ + ++K + P I
Sbjct: 302 EGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV-GCVPDII 360
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ GLI + F MK++ +PN+ T + ++ + + M A +LF +
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
R L P+E+TY+S+++A+ A + M +G +L+ +
Sbjct: 421 RRTG-------------LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 467
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
LL +AG+ E F S+L+ G P+ +T ++ I E A+ ++ M
Sbjct: 468 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 139/344 (40%), Gaps = 21/344 (6%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
WK + M Q+G+ LL GL G +A V + LKD + VYT L
Sbjct: 449 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM--LKDGISPNQQ-VYTAL 505
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ KA R +A++I M E CN+ PD+ Y S+ L+E ++E M+ +
Sbjct: 506 VHGYIKAERMEDAMKILKQMTE-CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ + V+ +++A + + F++++ G++ + TY +
Sbjct: 565 ---------------ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 609
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + ++G +L ++F +M G Y L+ + I A M+ RG
Sbjct: 610 LIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRG 669
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ + + L +G Q+A++++ ++ L L + +T L+ G +
Sbjct: 670 MTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV-YTSLVSGFSQCGELHQA 728
Query: 475 ISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
F M + P +L+ Y + +A EL E R
Sbjct: 729 RKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 772
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 134/311 (43%), Gaps = 23/311 (7%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L + F YT L+ KAG EA ++ N ML+ + +I Y ++ L + G + E
Sbjct: 426 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ-AGVKLNIVTYTALLDGLCKAGRMIEAE 484
Query: 285 KLIERMRQ---KPSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNAC 324
++ M + P++++ + ++ + ++PDL++Y +++
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + + ++++ G+ + ++ ++GK FF++M G
Sbjct: 545 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 604
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+TY VL+ + G + AV M G+ +VY L LC N + A + ++
Sbjct: 605 VTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDE 664
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRND 503
++ R P FT LI ++ G++ + + + M + E ++ +++ +S+
Sbjct: 665 MQC-RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCG 723
Query: 504 MFSKAKELFEE 514
+A++ F E
Sbjct: 724 ELHQARKFFNE 734
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 16/186 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KAG A+ F ML L P++A Y S+ L + ++ KL + M
Sbjct: 607 YCVLIDGLCKAGIVELAVDYFCRMLS-LGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM 665
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + + PD+ + A+++ + + + ++ + ++
Sbjct: 666 QCRG---------------MTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 710
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + Q G+ +FF +M + G + L+R +++ G+++EA+ M
Sbjct: 711 VYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770
Query: 411 EQRGVV 416
E+ G++
Sbjct: 771 ERMGLI 776
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 181/439 (41%), Gaps = 61/439 (13%)
Query: 190 EGQMLK-LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
+G +L ++ G G +A+ L V GL K S FV +++ LG GR E
Sbjct: 280 DGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPK---TSTFV--AVISALGNHGRTEE 334
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKR------ 297
A IF M E L P I A++++ + G LKE +I M + P +
Sbjct: 335 AEAIFEEMKEG-GLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLV 393
Query: 298 ---------------IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+K M +N ++P+ +++ +L + +W+ F V ++++
Sbjct: 394 DAYANVGRWESARHLLKQMEARN----VQPNTFIFSRILASYRDRGEWQKTFEVLREMKN 449
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
S +KP Y + ++ + D E + +M G +T+ L+ + G +
Sbjct: 450 SNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDR 509
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A M++RG + + Y + L +W + +++ K++S + P +T+T L+
Sbjct: 510 AAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQS-QGLLPNVVTYTTLV 568
Query: 463 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA------------- 508
G +D I + MK +P+ NA++ +++ + +A
Sbjct: 569 DIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLR 628
Query: 509 KELFEETTRANSSG--------YTFLS-GDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
L + N+ G ++ L +KPD TY+++++A +++ V
Sbjct: 629 PSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAV 688
Query: 560 YKGMALSGCQLDQTKHAWL 578
Y+ M LSGC D A L
Sbjct: 689 YEEMILSGCTPDGKARAML 707
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/340 (18%), Positives = 146/340 (42%), Gaps = 43/340 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y+ L+ LG++ + +EA ++ + L P Y+++ + L++ + L+
Sbjct: 180 LLYSILIHALGRSEKLYEAF----ILSQKQTLTP--LTYNALIGACARNNDLEKALNLMS 233
Query: 289 RMRQKP--------SKRIKNMHRKNWDPV--------------LEPDLVVYNAVLNACVP 326
RMRQ S I+++ R N + +E D ++ N ++
Sbjct: 234 RMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAK 293
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + ++ SGL P +T+ + + G+ + F +M + G
Sbjct: 294 AGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKA 353
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
+ L++ + +G + EA + + ME+ G+ Y L N GRW+ A ++++++
Sbjct: 354 FNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQME 413
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 505
+ R+ +P F+ ++ S D G + + MK+ + +P+ N M+ + + +
Sbjct: 414 A-RNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCL 472
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
A E ++ R S G ++PD T++++++
Sbjct: 473 DHAMETYD---RMLSEG----------IEPDVVTWNTLID 499
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 174/432 (40%), Gaps = 41/432 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y +L L A + EA + M+ + N +P+ + + Q GLL V+L+E
Sbjct: 220 YTYNTVLKGLCFAKQWEEAEELMREMIRN-NCHPNEVTFATQIRAFCQNGLLDRAVELLE 278
Query: 289 RMRQKPS-----------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
+M + R+ + + + P+ V YNA L + +W
Sbjct: 279 QMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWD 338
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
V + ++ + P+ AT+ + + Q+ + E +M K G ++Y ++
Sbjct: 339 EVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTII 398
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRH 450
F E+ ++A+ + +M + T S L C LC RW DA L+ + +K H
Sbjct: 399 SCFSEQACADDALKLLNSMLCKP--DTISFNAVLKC-LCRAERWYDAAELMAKMLKEDCH 455
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 509
+ E+TF LI S G + D I +F+ M K C P+I T ++++ +S + A
Sbjct: 456 TN--EMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAF 513
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+LF P + D ++Y++ L+ A +W+ + M C
Sbjct: 514 DLFRSM----------------PCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCL 557
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
++ L+ + G + ++ + + G P + ++ Q + A+
Sbjct: 558 PNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKF 617
Query: 630 INAMAYAPFHIT 641
++ M P I+
Sbjct: 618 LSTMPCEPDTIS 629
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 154/382 (40%), Gaps = 43/382 (11%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
LKGL G W + V + + + K + ++ L+ L + A+ + M +
Sbjct: 328 LKGLCIAGRWDE---VGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQM-Q 383
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
PD+ +Y+++ + + +KL+ M + +PD +
Sbjct: 384 KYGYMPDVVSYNTIISCFSEQACADDALKLLNSM------------------LCKPDTIS 425
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+NAVL + +W + ++ K + T+ + ++ + Q+G+ E F M
Sbjct: 426 FNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMP 485
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
K +TY L+ F E+G A R+M R + + + + LC RW
Sbjct: 486 KYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADIFSYNATLKG---LCMAARWD 542
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 495
DA ++ + + + P E+TF LI S G ++ I +++ M + P+I T NA+
Sbjct: 543 DAGELIADMVT-KDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNAL 601
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
+ YS A + FLS P +PD +Y+S+L+ A +W+
Sbjct: 602 INGYSEQGCLDDALK--------------FLS--TMPCEPDTISYNSILKGLCRAERWKD 645
Query: 556 FEYVYKGMALSGCQLDQTKHAW 577
E + M C ++ +
Sbjct: 646 AEKLVTEMLRKNCTPNEVTFKY 667
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 25/247 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD YN VL + QW+ + +++ ++ P+ T+ + Q+G D
Sbjct: 215 VAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAV 274
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-C 428
E +M K G + Y LV F E G++++A+ + M R +V Y A
Sbjct: 275 ELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCR----PNTVCYNAALKG 330
Query: 429 LCNNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE- 486
LC GRW + L+ E ++ + P + TF+ LI S + I + + M+ +
Sbjct: 331 LCIAGRWDEVGELIAEMVR--KDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYM 388
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ + N ++ +S A +L KPD +++++L+
Sbjct: 389 PDVVSYNTIISCFSEQACADDALKLLNSML----------------CKPDTISFNAVLKC 432
Query: 547 SATAHQW 553
A +W
Sbjct: 433 LCRAERW 439
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 102/261 (39%), Gaps = 42/261 (16%)
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 488
LC R DA V+E +K+ + ++ L+ G + D + + + N
Sbjct: 129 LCARRRLADAERVLEALKTSGAAD--AVSHNTLVAGYCRDGSLWDAERVLEAARASGAAN 186
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T A++ Y R+ + A L P+ PD YTY+++L+
Sbjct: 187 VVTYTALIDGYCRSGRLTDALRLIASM----------------PVAPDTYTYNTVLKGLC 230
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEI 604
A QWE E + + M + C ++ A + + G LL+ A + LLE G +
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNG---LLDRAVE-LLEQMPKYGCM 286
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER----------QWTELFESNED 654
P + ++ ++ + A+ L++ M P + +W E+ E +
Sbjct: 287 PDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAE 346
Query: 655 RISRD------KLEKLLNALC 669
+ +D L+N+LC
Sbjct: 347 MVRKDCPPNDATFSTLINSLC 367
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 97/250 (38%), Gaps = 26/250 (10%)
Query: 113 LRELKEMFEKDLNWVLDDDVQLGSDYFAKNV-EWHPEKRWRSEAEAIRVLVDRLSEREMT 171
L+E E N ++D Q G A + E P+ R + L++ SE+ +
Sbjct: 450 LKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLD 509
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVY 231
+ R M +F+ LK GL W A + + + K L + +
Sbjct: 510 KVAFDLFRSMPCRADIFSYNATLK---GLCMAARWDDAGEL---IADMVTKDCLPNEVTF 563
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
L+ L + G + A+ ++ M + + PDI Y+++ + G L + +K + M
Sbjct: 564 NILINSLCQKGLVNRAIEVYEQMPKY-GITPDIFTYNALINGYSEQGCLDDALKFLSTMP 622
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
EPD + YN++L + +WK + ++ + P+ T
Sbjct: 623 ------------------CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVT 664
Query: 352 YGLAMEVMLQ 361
+ A ++ ++
Sbjct: 665 FKYANQLFIK 674
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 183/438 (41%), Gaps = 37/438 (8%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
G F + L+ GL G R A+ +L V G + ++ +Y ++ + K
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV---VMYNTIIDSMCKVKLV 241
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+EA +F+ M+ + PD+ Y ++ +G LK+ + L +M ++N
Sbjct: 242 NEAFDLFSEMVSK-GISPDVVTYSALISGFCILGKLKDAIDLFNKMI------LEN---- 290
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
++PD+ +N ++NA + K VF + K G+KP+ TY M+ +
Sbjct: 291 -----IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
+ F MA+ G +Y +++ F + K +EA+ + M ++ ++ Y
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
L L +GR A+ +V+++ R P T+ ++ + +D I++ KD
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHD-RGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464
Query: 485 -CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
+P+I T + ++K ++ A+++FE+ GY D Y Y+ M
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARKVFEDLL---VKGYNL----------DVYAYTIM 511
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
++ + + M +GC D + +++ + + + E ++ G
Sbjct: 512 IQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Query: 604 IPHPLFFTEMLIQAIVQS 621
PL F ++ + + Q+
Sbjct: 572 ---PLNFYDLYLTRLAQT 586
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 134/359 (37%), Gaps = 54/359 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLAMEVMLQSGK 364
++P+LV N ++N F VF ++ K G P T+ GL ++ +Q
Sbjct: 116 IKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAF 175
Query: 365 YDLVHE----------------FFRKMAKSGEAIGAL----------------TYKVLVR 392
L H+ + K GE AL Y ++
Sbjct: 176 --LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIID 233
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
+ + +NEA M +G+ Y L C G+ +DA+ + K+ L + K
Sbjct: 234 SMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM-ILENIK 292
Query: 453 PLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P TF L+ + G + + ++F MK +PN T N+++ Y +KAK +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F + + PD +YS M+ +++ ++K M D
Sbjct: 353 FNTMAQGG-------------VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
++ L+ S++G+ D + + G P+ + +L +KA+AL+
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALL 458
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 121/300 (40%), Gaps = 15/300 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F +L + P A + + +++S Y V +KM G + +L+ F
Sbjct: 72 LFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFC 131
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G I A + + + G V + L+ LC G+ Q A L +K+ +L +
Sbjct: 132 QLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFD-Q 190
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
I++ LI G + + Q + + +PN+ N ++ + + ++A +LF E
Sbjct: 191 ISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSE 250
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
S G + PD TYS+++ + + ++ M L + D
Sbjct: 251 MV---SKG----------ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYT 297
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L+ + GK + FD +++ G P+ + + ++ + KA ++ N MA
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/537 (19%), Positives = 219/537 (40%), Gaps = 100/537 (18%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E + +++A +L +L R ++ + ++ G+++ E ++ GL G
Sbjct: 12 EAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
QA+ ++ + G+ + F+Y ++ L +A R +A ++ M+E+ ++ P++ Y
Sbjct: 72 QALELVRELSGVYTP----TLFIYNGIITGLCRASRVMDAYKVLEKMVEE-SIVPNVFTY 126
Query: 268 HSVAVTL---GQVGLLKELVKLIERMRQKPS-----KRIKNMHRKN-WDPVLE------- 311
+ L + L +E+ + ++R KP+ I+++ R D L
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRS 186
Query: 312 ----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
D++ ++ + + +++R+ G++P+ TY + Q G+ D
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDR 246
Query: 368 VHEFF------------------------------------RKMAKSGEAIGALTYKVLV 391
V FF ++ +SG +TY +L+
Sbjct: 247 VIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLI 306
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
F G+ + ++ + +M + GV Y L LC ++QDA ++E +++ S
Sbjct: 307 NTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEA-AGS 365
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
P +T+ ++ G +D+ +++ M K C P++ T + ++ S+ M A +
Sbjct: 366 PPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVK 425
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM------- 563
LF E +++ G PD YS ++ + A + E +Y GM
Sbjct: 426 LF-ELIKSSREG------------PDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGD 472
Query: 564 ----ALSG-----CQLDQTKHAWLLVEA--------SRAGKCHLLEHAFDSLLEAGE 603
AL+G C ++T A +VE +++G L++ D LLE+ E
Sbjct: 473 NICRALAGLVAALCDAERTDSARRIVEVASERGHRMTKSGDTDLVKIVEDHLLESKE 529
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/469 (18%), Positives = 182/469 (38%), Gaps = 91/469 (19%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L L + + E +R+F L+ +Y + Y V L G+ + ++L+
Sbjct: 22 FTLLATKLFRRSKFSEVVRLFTLLASRGVVYGE-TTYKLVVDGLCGAGMANQALELV--- 77
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ V P L +YN ++ + + + V +++ + + P+
Sbjct: 78 -------------RELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVF 124
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + + +S K L E F++M ++G +TY L++ G+I+EA+ + +
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM--I 182
Query: 411 EQRGVVGTASVYYELACC-----LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
EQR + V + C LC R DA+ +E+++ + +P E+T++ L+
Sbjct: 183 EQRSLELPTDV---ITCTTIVGGLCKASRLDDALKFMEEMRQM-GVRPNEVTYSNLVHGF 238
Query: 466 MDGGHIDDCISIFQHMKDH-----------------CE--------------------PN 488
G +D I F+ K C+ P+
Sbjct: 239 RQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPD 298
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYT-------------------- 524
+ T + ++ ++R F + EL E+ R + Y+
Sbjct: 299 VVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLE 358
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
+ G+P P+ TY+S+++ + + + VY+ M S C D ++ ++ S+
Sbjct: 359 LMEAAGSP--PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSK 416
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
AG F+ + + E P ++ ++ E+A + + M
Sbjct: 417 AGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGM 465
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R + ++G + + + +L + K +E V + RGVV + Y + LC
Sbjct: 8 RSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
G A+ +V ++ + P + G+I + D + + M ++ PN+ T
Sbjct: 68 GMANQALELVRELSGV--YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFT 125
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+L R++ A+E+F+E R KP+ TY ++++
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGC-------------KPNPITYGTLIQ 166
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 146/336 (43%), Gaps = 22/336 (6%)
Query: 283 LVKLIERMRQKPS--KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
L+ I +M+ + +K MH ++PD + N V+N+ F V +
Sbjct: 81 LLGFIVKMKHYTTAISLVKEMHSSLG---IKPDTFILNVVINSLCHLKLVAFGFSVLGTM 137
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
K GL+PS T+ + + + G E + K+G TY VL+ + GK
Sbjct: 138 LKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKT 197
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFT 459
+EAV +R ME+R VY + LC +G +A+ L +E S + KP +T+T
Sbjct: 198 SEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLE--MSGKGIKPNLVTYT 255
Query: 460 GLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI + G + S+ + MK P++ ++N ++ V + +AK +
Sbjct: 256 CLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVI------ 309
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
G+ L G+ PD +TY+S+++ +Q + V++ M GC D + L
Sbjct: 310 ---GFMILVGE----VPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSL 362
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + + H D +++ G P + +T ++
Sbjct: 363 IHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLI 398
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/477 (20%), Positives = 192/477 (40%), Gaps = 35/477 (7%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E H + + + V+++ L ++ A + + M + GL + L+ GL K
Sbjct: 100 EMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVK 159
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G +A+ ++D V + D+K+ Y L+ L K G+ EA+ M E+ N P+
Sbjct: 160 GDVGRAVELVDHVEKTGYRSDVKT---YGVLINGLCKMGKTSEAVGWLRKM-EERNWNPN 215
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y +V L + GL+ E + L M K K P+LV Y ++
Sbjct: 216 VVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIK---------------PNLVTYTCLIQG 260
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
+WK + ++ K G+ P + + ++V+ + GK M GE
Sbjct: 261 LCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPD 320
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
TY L+ + + +++EA M RG + Y L C AM +++
Sbjct: 321 VFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLD 380
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRN 502
++ + + P +T+T LI G +F +M + + PN+ T +L ++
Sbjct: 381 EMIKVGFT-PDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKS 439
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+ S+A LF ++N L + YS +L+ +A + ++
Sbjct: 440 QLLSEALSLFHAMEKSN-------------LDLNIVIYSIILDGMCSAGKLNTALELFSC 486
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
+ G Q++ + ++ ++ G E ++ E G +P + + +Q +V
Sbjct: 487 LPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTY-NVFVQGLV 542
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 65/354 (18%), Positives = 122/354 (34%), Gaps = 88/354 (24%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+ W ++D L + + ++ M+ G+ L++GL + G W+
Sbjct: 209 ERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWK 268
Query: 208 QAMSVLDWVYGLKDKRDLKSR--------------------------------FVYTKLL 235
+A S+LD + + DL+S F Y L+
Sbjct: 269 EAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLI 328
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-------LLKELVKL-- 286
+ EA R+F LM+ L PDI AY S+ ++ LL E++K+
Sbjct: 329 DRYCLQNQMDEATRVFELMVSRGCL-PDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGF 387
Query: 287 --------------IERMRQKPSKRI-KNMHRKNWDPVLEP------------------- 312
+ R +K + NMH+ P L+
Sbjct: 388 TPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALS 447
Query: 313 ------------DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
++V+Y+ +L+ + + +F L GL+ + Y + +
Sbjct: 448 LFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFA 507
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ G D + M ++G + TY V V+ E +I ++ + M +G
Sbjct: 508 KQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKG 561
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 169/406 (41%), Gaps = 34/406 (8%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++F ++M ++ + L+ GL G +A + W + L +K S+ L
Sbjct: 415 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL--W-FRLLEKGSPASKVTSNAL 471
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L AG+ EA RI MLE L D Y+++ + G ++ +L E M ++
Sbjct: 472 IHGLCGAGKLPEASRIVKEMLER-GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 530
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
++PD+ YN +L + ++ + + SGL + TYG+
Sbjct: 531 ---------------IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 575
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
ME ++ + + V F ++ + ++ Y ++++A + G + A+ + NM+ +G
Sbjct: 576 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG 635
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
++ + Y L +CN G +DA ++++++ P + +T LI G +D
Sbjct: 636 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRK-EGFVPNVVCYTALIGGYCKLGQMDTA 694
Query: 475 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
S + M + PN T M+ Y + KA L + SG +
Sbjct: 695 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLL---IKMKESG----------I 741
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
PD TY+ + A+ + V MA G +D+ + L+
Sbjct: 742 VPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 34/265 (12%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+D Y L K S L+ L KA + +F +M E PD+ ++ +V
Sbjct: 171 VDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSE--GACPDVFSFTNVIN 228
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L + G ++ ++L +M + + P++V YN ++N + +
Sbjct: 229 ALCKGGKMENAIELFMKMEKLG---------------ISPNVVTYNCIINGLCQNGRLDN 273
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
F + +++ G++P+ TYG + +++ +D V+ +M +G + + L+
Sbjct: 274 AFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLID 333
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
+ + G I A+ M + + T+ Y L C + + + A +E+I S
Sbjct: 334 GYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILS----- 388
Query: 453 PLEITFTGLIISSMDGGHIDDCISI 477
+GL I H D+C S+
Sbjct: 389 ------SGLSI------HPDNCYSV 401
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 128/343 (37%), Gaps = 36/343 (10%)
Query: 326 PSHQWKGVFWVFKQLR------------KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
P + + V W+ K+ R +PS + + + + GK+ E +
Sbjct: 395 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWF 454
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
++ + G +T L+ GK+ EA V+ M +RG+ Y L CN G
Sbjct: 455 RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 514
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTV 492
+ + + E++ R +P T+ L+ + G +DD I ++ K NI T
Sbjct: 515 KVEGCFRLREEMTK-RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTY 573
Query: 493 NAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFL------SGDGAP---------- 532
M++ Y + + + LF E NS Y + +G+ A
Sbjct: 574 GIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 633
Query: 533 --LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ P+ TYSS++ E +++ M G + + L+ + G+
Sbjct: 634 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDT 693
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
E + ++ P+ +T M+ N EKA L+ M
Sbjct: 694 AESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKM 736
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 133/292 (45%), Gaps = 18/292 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD YN++++A + QW+ + ++++ + PS TY + +G + E
Sbjct: 185 KPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALE 244
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+KM ++G +T+ +++ AF + ++A+A M+ V + CL
Sbjct: 245 LCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLV 304
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
+ +A+ + ++ R P + +T+T ++ S G ++C ++F M + PN
Sbjct: 305 KVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPN 364
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I + NA+L Y+ + M ++A E F+ L +G KPD +Y+S+L A
Sbjct: 365 IVSYNALLGAYASHGMHTEALETFK-----------LLKQNG--FKPDIVSYTSLLNAYG 411
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ E V+ M + C+ ++ + L+ AG +L+ A L E
Sbjct: 412 RSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAG---MLKEAISLLHE 460
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 29/252 (11%)
Query: 172 AKNWK----FVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD 224
A NWK + M ++G+ + T +L K + + +A++ + + K D
Sbjct: 236 AGNWKKALELCKKMTENGVGPDLITHNIVLSAFK---NGAQYSKAIAYFEIMKSSKVAPD 292
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP-DIAAYHSVAVTLGQVGLLKEL 283
+ + L + G EA+ +FN M E + P D+ Y S+ + G +
Sbjct: 293 TCTMNIVIHCLVKVALYG---EAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENC 349
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ + M + + P++V YNA+L A FK L+++
Sbjct: 350 KAVFDMMVAEG---------------VRPNIVSYNALLGAYASHGMHTEALETFKLLKQN 394
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G KP +Y + +S + E F +M K+ ++Y L+ A+ G + EA
Sbjct: 395 GFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEA 454
Query: 404 VAAVRNMEQRGV 415
++ + MEQ G+
Sbjct: 455 ISLLHEMEQDGI 466
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT LL G++ P +A +FN M ++ P+ +Y+++ G G+LKE + L+ M
Sbjct: 403 YTSLLNAYGRSALPEKAREVFNEMRKNA-CKPNKVSYNALIDAYGSAGMLKEAISLLHEM 461
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q ++PD++ + +L AC Q + + + G++ +
Sbjct: 462 EQDG---------------IQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTV 506
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
Y + L G Y E + M A+TY +L+
Sbjct: 507 AYNSGIGSYLSLGDYKKALELYTSMRTGNVKPDAVTYNILI 547
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 113/284 (39%), Gaps = 15/284 (5%)
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
YG+ + + + + D F +M + TY L+ A G+ A+ + +M+
Sbjct: 156 YGMMIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQ 215
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+ + + + Y + G W+ A+ + +K+ P IT ++ + +G
Sbjct: 216 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTE-NGVGPDLITHNIVLSAFKNGAQY 274
Query: 472 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
I+ F+ MK P+ T+N ++ + ++ +A ELF +
Sbjct: 275 SKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTI--------- 325
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL-VEASRAGKCH 589
PD TY+S++ + + Q E + V+ M G + + + LL AS
Sbjct: 326 --CPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTE 383
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
LE F L + G P + +T +L + EKA + N M
Sbjct: 384 ALE-TFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEM 426
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 156/395 (39%), Gaps = 37/395 (9%)
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
S A VLD +K+K Y L+ L G H AL N +L++ N P +
Sbjct: 104 SIPHAYQVLDR---MKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKE-NFNPTV 159
Query: 265 AAYHS-VAVTLGQVGLLKELVKLIERMRQK-------PSKRIKNMHRKNW-DPVLEP--- 312
Y + TL Q G+ E +KL++ M + P I M R+ + D E
Sbjct: 160 VTYTILIEATLLQGGI-DEAIKLLDEMFEINLQPDVFPYNSIIXMCREGYVDRAFEVISS 218
Query: 313 --------DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
D++ YN +L + +W+ F + + G + + TY + + + + GK
Sbjct: 219 ISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGK 278
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
+ + M K G Y L+ +EG+++ A+ + M G V Y
Sbjct: 279 VEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNT 338
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
+ CLC R +A+ + EK+ + S P ++ + + GH + + M D
Sbjct: 339 ILACLCKQKRADEALSIFEKLGEVGCS-PNASSYNTVFSALGSSGHKVRALGMILEMLDX 397
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+P++ N+++ R+ M +A EL + +S KP +Y+ +L
Sbjct: 398 VDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSE-----------CKPSVVSYNIVL 446
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ V M GC ++T + +L+
Sbjct: 447 LGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLI 481
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 107/285 (37%), Gaps = 22/285 (7%)
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
P+ + V +++ G P TY + + + G EF ++ K +
Sbjct: 101 PTESIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVV 160
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY +L+ A +G I+EA+ + M + + Y + +C G A V+ I
Sbjct: 161 TYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSII-XMCREGYVDRAFEVISSI 219
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH----CEPNIGTVNAMLKVYSR 501
S ++ + IT+ L+ S + G + + F+ M D CE N+ T + ++ R
Sbjct: 220 SSKGYALDV-ITYNILLRSLXNQGKWE---AGFELMSDMVAKGCEANVVTYSVLISSLCR 275
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+ + L ++ + L+PD Y Y ++ + + V
Sbjct: 276 DGKVEEGVGLLKDMKKKG-------------LEPDGYCYDPLIAVLCKEGRVDLAIEVLD 322
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
M GC D + +L + + F+ L E G P+
Sbjct: 323 VMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPN 367
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 24/197 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+A+L K GR A+ + ++M+ D PDI Y+++ L + E + + E
Sbjct: 299 YCYDPLIAVLCKEGRVDLAIEVLDVMISD-GCVPDIVNYNTILACLCKQKRADEALSIFE 357
Query: 289 RMRQ---KPSK-----------------RIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPS 327
++ + P+ R M + D V +PD++ YN++++ C
Sbjct: 358 KLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXV-DPDVIAYNSLISCLCRDG 416
Query: 328 HQWKGV-FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + V ++ S KPS +Y + + + + G+ E M G T
Sbjct: 417 MVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETT 476
Query: 387 YKVLVRAFWEEGKINEA 403
Y L+ G +N+A
Sbjct: 477 YTFLIEGIGFGGWLNDA 493
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/447 (19%), Positives = 179/447 (40%), Gaps = 40/447 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL G + A+ V G K D+ + L+ L K+GR EA +IF M
Sbjct: 71 VIRGLCKAGRFGDALGYFKTVAGTKCTPDI---ITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P++ Y +V L + G L ++L++ M + P+++
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCC---------------PNVI 172
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ ++ + + F + +++ + G +P Y + + +S + D E + M
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+SG +TY L+ F +++ A ++ M +RG Y + LC + R
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID------DCISIFQHMKDH-CEPN 488
DA +++++ + R P IT++ +I +D I + MK C PN
Sbjct: 293 DDAQALLKQMVAAR-CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
GT +++ R +A L + + PD ++S ++ +
Sbjct: 352 AGTYAVVIEGLCRARKSQQALALLRRMIDSE-------------VVPDLSSFSMVIGSLC 398
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+H + ++ M+ C+ + +A L+ S+ G+ F+ ++E+ P
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR-PGVA 457
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAY 635
+ +L E+AV ++ M +
Sbjct: 458 TYNSVLDGLCGVGRIEEAVRMVEGMIH 484
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 139/331 (41%), Gaps = 34/331 (10%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+++R + + F Y L+ L KAG+ +A + + M D + P +A ++ V L + G
Sbjct: 21 FREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEM-RDRGIPPGVAVHNGVIRGLCKAG 79
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ + + + PD++ +N +++A V S + + F +F+
Sbjct: 80 RFGDALGYFKTVAGTKCT---------------PDIITFNILVDALVKSGRVEEAFQIFE 124
Query: 339 QLRKSG-LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+ S P+ TY + + + GK D E M ++G +TY VLV +
Sbjct: 125 SMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE-KIKSLRHSKPLEI 456
G+ ++ ++ M +RG +Y L LC + R +A+ +V+ I+S P +
Sbjct: 185 GRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS--GCYPTVV 242
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ L+ +D + Q M + C P++ N ++ R+ A+ L ++
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
A PD TYS++++
Sbjct: 303 VAARCV-------------PDVITYSTIIDG 320
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 170/445 (38%), Gaps = 41/445 (9%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N LN V + Q +F++ R P+ TYG + + ++GK D +E +M
Sbjct: 2 NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
G G + ++R + G+ +A+ + + + L L +GR ++
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 496
A + E + + P +T+T +I G +D I + M + C PN+ T + ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
+ + K L +E TR +PD Y+++L + + +
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRG-------------FQPDVIMYNTLLNGLCKSRRLDEA 225
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
+ + M SGC + L+ R+ + + E G P + + ++
Sbjct: 226 LELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285
Query: 617 AIVQSNYEKAVALINAMAYA---PFHITERQWTELFESNEDRISRD-KLEKLLNAL---- 668
+ + A AL+ M A P IT + + R+ D KLE L
Sbjct: 286 LCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL-CKDWRVDADWKLEAACEILEMMK 344
Query: 669 ---CNCNAASSEITVSNLSRA---------LHALCRSEKERDLSS-SAHFGS--QAIDIS 713
C NA + + + L RA L + SE DLSS S GS ++ D+
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404
Query: 714 PLHGIHEAFDVKETENVPSSSASMM 738
+ I +E + P + A+++
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALI 429
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/305 (16%), Positives = 125/305 (40%), Gaps = 16/305 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ Y ++++ + + + + ++R G+ P A + + + ++G++ +
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG-VVGTASVYYELACCLC 430
F+ +A + +T+ +LV A + G++ EA +M + Y + LC
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
+G+ A+ +++ + P IT++ L+ G D ++ Q M + +P++
Sbjct: 148 KDGKLDRAIELLDLMNE-TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
N +L ++ +A EL + R+ P TY+S++E
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCY-------------PTVVTYNSLMELFCR 253
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ Q + + + M+ GC D + ++ R + + ++ A +P +
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313
Query: 610 FTEML 614
++ ++
Sbjct: 314 YSTII 318
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 30/251 (11%)
Query: 161 LVDRLSEREMTAKNWKF------VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
++D L + +WK + +M Q+G G +++GL +QA+++L
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVT 273
+ + DL S ++ ++ L K+ A +IF +M E +C P+ AY ++
Sbjct: 377 RMIDSEVVPDLSS---FSMVIGSLCKSHDLDAAYKIFGMMSERECK--PNPVAYAALIDG 431
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKG 332
L + G + + V++ E M + P + YN+VL+ C +
Sbjct: 432 LSKGGEVDKAVRVFELMVES----------------FRPGVATYNSVLDGLCGVGRIEEA 475
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
V V + K P A+YG + + + + +E F+ + G A+ Y VLV
Sbjct: 476 VRMVEGMIHKECF-PDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534
Query: 393 AFWEEGKINEA 403
++ ++++A
Sbjct: 535 ELCKKKRLSDA 545
>gi|145524846|ref|XP_001448245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415789|emb|CAK80848.1| unnamed protein product [Paramecium tetraurelia]
Length = 967
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 155/359 (43%), Gaps = 27/359 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KG G K +A+S+ + + + K +R + LL K + + A R F M
Sbjct: 415 LIKGCGRKKRLNEAISLFEEMKQIGIK---PNRISFNSLLDSCVKCNKMNVAWRYFEEMR 471
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ ++PD Y +L +K R + + I + + +PD +
Sbjct: 472 KQYGIFPDNFTY----------SILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEI 521
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+YN++++ACV ++ + +FK+++ ++PS+ TYG+ ++ + + F +M
Sbjct: 522 LYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLNGAFRMFEEM 581
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ I +TY LV A ++++A+ + M+ + + +Y + C +
Sbjct: 582 KQKKIPINDVTYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLYTTIIKGFCKLNQT 641
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
++AM +K + + P IT+ L+ + G ++ +FQ + + +P++ T +
Sbjct: 642 EEAMKYFSLMKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQELVESTIKPDLITFST 701
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+LK + R R N + T L + PDE +LE+ Q+
Sbjct: 702 LLKGHCRRG----------NMKRLNETVQTMLH---YQINPDESLLQLILESCLNQQQY 747
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 136/356 (38%), Gaps = 57/356 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY--PDIAAYHSVAVTLGQVGLLKELVKL 286
F YT L+ G + LR+ + E+ Y PD Y+ + G L +L
Sbjct: 338 FTYTTLIN--GLKNSDNMDLRLAFQLFEEYKQYNQPDQIIYNCLLDACINAGDLNRGFQL 395
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M+Q S ++ D + YN ++ C + +F+++++ G+K
Sbjct: 396 LNEMKQSQS--------------IQLDEITYNTLIKGCGRKKRLNEAISLFEEMKQIGIK 441
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS-GEAIGALTYKVLVRAFWEEGKINEAVA 405
P+ ++ ++ ++ K ++ +F +M K G TY +LV K N +
Sbjct: 442 PNRISFNSLLDSCVKCNKMNVAWRYFEEMRKQYGIFPDNFTYSILVNGI----KTNHS-- 495
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
N A+ ++E+I+ KP EI + LI +
Sbjct: 496 -------------------------NRDELLRAITLLEQIQETGQFKPDEILYNSLIDAC 530
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR----ANS 520
+ I + +F+ MK+ EP+ T ++K Y + + + A +FEE + N
Sbjct: 531 VKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLNGAFRMFEEMKQKKIPIND 590
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
Y L A ++ D + + +Y + C+L+QT+ A
Sbjct: 591 VTYGCLV--DACVRNDRLDQALQFIEQMKSQNLPINTVLYTTIIKGFCKLNQTEEA 644
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD--L 367
++P +V N +++ ++Q + F+ L+ + KP TY + + S D L
Sbjct: 298 IQPTIVTINTMIDQYFKNNQKDKAWKTFENLKLTSTKPDNFTYTTLINGLKNSDNMDLRL 357
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
+ F + + + + Y L+ A G +N + M+Q + + Y
Sbjct: 358 AFQLFEEYKQYNQP-DQIIYNCLLDACINAGDLNRGFQLLNEMKQSQSIQLDEITYNTLI 416
Query: 428 CLCN-NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-- 484
C R +A+ + E++K + KP I+F L+ S + ++ F+ M+
Sbjct: 417 KGCGRKKRLNEAISLFEEMKQI-GIKPNRISFNSLLDSCVKCNKMNVAWRYFEEMRKQYG 475
Query: 485 CEPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
P+ T VN + +S D +A L E+ + KPDE Y
Sbjct: 476 IFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQ------------ETGQFKPDEILY 523
Query: 541 SSMLEASATAHQWEYFEYVYKGMAL 565
+S+++A F + KGM L
Sbjct: 524 NSLIDACVK------FNEIQKGMQL 542
>gi|357519615|ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524118|gb|AET04572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 635
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 187/415 (45%), Gaps = 46/415 (11%)
Query: 156 EAIRVLVDRLSEREMTAKNW-KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
E +R+L ++S++E K K+V+++ TE L L + LG W Q + V
Sbjct: 53 ELVRLLTRKISDKEPLLKTLNKYVKLVR------TEHCFL-LFEELGKHDKWLQCLEVFR 105
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS-VAVT 273
W+ + + + VY+KL++++GK G+ A+ +F+ M + PD + Y+S ++
Sbjct: 106 WMQ--RQRWYIADNGVYSKLISVMGKKGQIRLAMWLFSEM-RNTGCRPDTSVYNSLISAH 162
Query: 274 LGQVGLLKELVKLIERM-RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L K LVK + + K ++R K P++V YN +L A +
Sbjct: 163 LHSRDKSKALVKALGYFEKMKTTERCK------------PNIVTYNILLRAFAQARDVNQ 210
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
V ++FK L +S + P T+ M+ ++G + +M + + +TY +L+
Sbjct: 211 VNYLFKDLDESSVSPDIYTFNGVMDGYGKNGMIREMESVLVRMKSNQVKLDLITYNLLID 270
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG--RWQD-AMLVVEKIKSLR 449
++ ++ + ++ +++ + T + + + N G R +D A V + + +
Sbjct: 271 SYGKKQQFDKMEQVFKSLSRSKEKPTLPTFNSM---ILNYGKARLKDKAENVFQNMTDMG 327
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKA 508
++ P +T LI G + + + +F + + P + T+NAML VY N + +A
Sbjct: 328 YT-PSFVTHESLIHMYGLCGCVSNAVELFDQLIESKVPIKVSTLNAMLDVYCINGLQQEA 386
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
LF TRA S + PD TY + +A A+ E + + K M
Sbjct: 387 DSLF---TRAKS----------IKIFPDATTYKLLYKAYTKANSKELLDKLLKQM 428
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 140/362 (38%), Gaps = 62/362 (17%)
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALT-YKVLVRA------FWEEGKIN---EAVAAVRNM 410
QS +LV RK++ + L Y LVR F E GK + + + R M
Sbjct: 48 QSETQELVRLLTRKISDKEPLLKTLNKYVKLVRTEHCFLLFEELGKHDKWLQCLEVFRWM 107
Query: 411 E-QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI---ISSM 466
+ QR + VY +L + G+ + AM + ++++ +P + LI + S
Sbjct: 108 QRQRWYIADNGVYSKLISVMGKKGQIRLAMWLFSEMRN-TGCRPDTSVYNSLISAHLHSR 166
Query: 467 DGGH-IDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
D + + F+ MK + C+PNI T N +L+ F++A+++ N Y
Sbjct: 167 DKSKALVKALGYFEKMKTTERCKPNIVTYNILLRA------FAQARDV-------NQVNY 213
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
F D + + PD YT++ +++ E V M + +LD + L+
Sbjct: 214 LFKDLDESSVSPDIYTFNGVMDGYGKNGMIREMESVLVRMKSNQVKLDLITYNLLIDSYG 273
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI---QAIVQSNYEKAVALINAMAYAPFHI 640
+ + +E F SL + E P F M++ +A ++ E + M Y P +
Sbjct: 274 KKQQFDKMEQVFKSLSRSKEKPTLPTFNSMILNYGKARLKDKAENVFQNMTDMGYTPSFV 333
Query: 641 TERQWTELFESNEDRISRDKLEKLLNALCNCNAASSE-----------ITVSNLSRALHA 689
T ++ LC C + + E I VS L+ L
Sbjct: 334 THESLIHMY-----------------GLCGCVSNAVELFDQLIESKVPIKVSTLNAMLDV 376
Query: 690 LC 691
C
Sbjct: 377 YC 378
>gi|26449475|dbj|BAC41864.1| unknown protein [Arabidopsis thaliana]
gi|29028966|gb|AAO64862.1| At5g25630 [Arabidopsis thaliana]
Length = 574
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 179/424 (42%), Gaps = 52/424 (12%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG---QVGL 279
R ++SR TKL+ +L + GRPHEA +F + E + P + +Y ++ + Q G
Sbjct: 43 RTVRSR---TKLMNVLIERGRPHEAQTVFKTLAETGH-RPSLISYTTLLAAMTVQKQYGS 98
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ +V +E+ K D + +NAV+NA S + +
Sbjct: 99 ISSIVSEVEQSGTK------------------LDSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA-IGA--LTYKVLVRAFWE 396
+++ GL P+ +TY ++ +GK + E M + G +G T+ VLV+A+ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLE 455
+ K+ EA V+ ME+ GV Y +A C G A VVEK+ +KP
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI----GTVNAMLKVYSRNDMFSKAKE 510
T ++ G + D + + MK+ E N+ +N ++V R D +
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR-DGIDEVLT 319
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
L +E +K D TYS+++ A ++A E V+K M +G +
Sbjct: 320 LMKECN----------------VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
D ++ L RA E ++L+ P+ + FT ++ + + A+ +
Sbjct: 364 DAHAYSILAKGYVRAKGPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVF 422
Query: 631 NAMA 634
N M
Sbjct: 423 NKMC 426
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 148/389 (38%), Gaps = 74/389 (19%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + GL T L+KG G G ++ +LD + + + + L+ K
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-LLKELVKLIERM----RQKPS 295
+ EA + M E+C + PD Y+++A Q G ++ +++E+M + KP+
Sbjct: 201 KKKVEEAWEVVKKM-EECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPN 259
Query: 296 KRIKNMH-----------------RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
R + R+ + +E +LVV+N+++N V G+ V
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLT 319
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+++ +K TY M +G + + F++M K+G A Y +L + +
Sbjct: 320 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+A + L+VE S+P + F
Sbjct: 380 GPKKAEELLET------------------------------LIVE-------SRPNVVIF 402
Query: 459 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
T +I G +DD + +F M K PNI T ++ Y KA+E+ +
Sbjct: 403 TTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQ---- 458
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ G G +KP+ T+ + EA
Sbjct: 459 -------MMRGCG--VKPENSTFLLLAEA 478
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 137/326 (42%), Gaps = 15/326 (4%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
V P V++A+ + + ++ F ++++ + P + + + GK D +
Sbjct: 58 VCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGM 117
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
FF+ M +G TY +++ +EG I A M+ RG++ Y +
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
GR D + E++KS+ +P IT+ LI G + + F+ MK +P
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMS-CEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKP 236
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ + + ++ + + DM +A + + + R L P+E+TY+S+++A
Sbjct: 237 NVVSYSTLVDAFCKEDMMQQALKFYVDMRRLG-------------LVPNEHTYTSLVDAY 283
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ M+ G + + + L+ + E F ++ AG IP+
Sbjct: 284 CKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNL 343
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAM 633
+T ++ + N ++A+ L++ M
Sbjct: 344 ASYTALIHGFVKAKNMDRALELLDEM 369
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 136/336 (40%), Gaps = 36/336 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V+ L ++L + EAL+ F+ M + C ++P + + + ++G + + +
Sbjct: 65 VFDALFSVLIEEDMFEEALQCFSKM-KRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKD 123
Query: 290 MRQKPSKRIKNMHRKNWDPV--------------------LEPDLVVYNAVLNACVPSHQ 329
M SK + D + L PD V YN++++ +
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+ F++++ +P TY + + GK EFFR+M +SG ++Y
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
LV AF +E + +A+ +M + G+V Y L C G DA + +++ +
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 508
+ +T+T LI D I + +F M PN+ + A++ + + +A
Sbjct: 304 VEWNV-VTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRA 362
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
EL +E + G G +KPD Y + +
Sbjct: 363 LELLDE-----------MKGRG--IKPDLLLYGTFI 385
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 158/378 (41%), Gaps = 47/378 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G A++VLD + +R + YT LL K +A+++ + M
Sbjct: 166 LIRGLCGRGRTANALAVLDEML---RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM- 221
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D PDI Y+ V + Q G + + IE ++ PS EP+ V
Sbjct: 222 RDKGCTPDIVTYNVVVNGICQEGRVDDA---IEFLKNLPSYGC------------EPNTV 266
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN VL + +W+ + ++ + G P+ T+ + + + + G + E ++
Sbjct: 267 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 326
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G + +L+Y L+ AF ++ K+++A+A + M RG Y L LC +G
Sbjct: 327 PKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 386
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ ++ ++K + P+ I++ +I G + + + M +P+I T +
Sbjct: 387 DVAVELLHQLKD-KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 445
Query: 495 MLKVYSRNDMFSKAKELFEET----TRANSSGY--------------------TFLSGDG 530
+ R D A F + R N+ Y ++ G+G
Sbjct: 446 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 505
Query: 531 APLKPDEYTYSSMLEASA 548
P+E TY+ ++E A
Sbjct: 506 C--MPNESTYTILIEGLA 521
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/400 (18%), Positives = 139/400 (34%), Gaps = 72/400 (18%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ L +GR EA R+ L C PD+ AY+ A+ G G
Sbjct: 104 LIKKLSASGRTAEARRV----LAACG--PDVMAYN--AMMAGYCG--------------- 140
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ ++ R + +E D + ++ + V ++ + P TY
Sbjct: 141 -AGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYT 199
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +E + Y + +M G +TY V+V +EG++++A+ ++N+
Sbjct: 200 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 259
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G Y + LC RW+DA E++
Sbjct: 260 GCEPNTVSYNIVLKGLCTAERWEDA----EELMG-------------------------- 289
Query: 474 CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+ + C PN+ T N ++ R + A E+ E+ + S
Sbjct: 290 -----EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS------------ 332
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
P+ +Y+ +L A + + M GC D + LL R+G+ +
Sbjct: 333 -PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 391
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
L + G P + + ++ ++A+ L+N M
Sbjct: 392 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 431
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 143/356 (40%), Gaps = 33/356 (9%)
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+L S +P A T ++ + SG+ E R +A G + + Y ++ + G
Sbjct: 88 RLVGSARRPDAGTCAALIKKLSASGR---TAEARRVLAACGPDV--MAYNAMMAGYCGAG 142
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+++ AA R +R V A L LC GR +A+ V++++ R P +T+
Sbjct: 143 QVD---AARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLR-RRCVPDVVTY 198
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
T L+ ++ + + M+D C P+I T N ++ + A E +
Sbjct: 199 TILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLK---- 254
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
N Y +P+ +Y+ +L+ TA +WE E + M GC +
Sbjct: 255 -NLPSYG--------CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 305
Query: 578 LLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM- 633
L+ R G L+E A + L + G P+ L + +L Q +KA+A ++ M
Sbjct: 306 LISFLCRKG---LVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362
Query: 634 ---AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 686
Y T L S E ++ + L +L + C S + L++A
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 418
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 25/190 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L G A+ +L + LKDK Y ++ L KAG+ EAL + N M+
Sbjct: 376 LLTALCRSGEVDVAVELL---HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 432
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR---KNWDPVLEP 312
L PDI Y ++A GL +E RI++ R K D + P
Sbjct: 433 SK-GLQPDIITYSTIAA-----GLCRE-------------DRIEDAIRAFGKVQDMGIRP 473
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+ V+YNA++ + +F + +G P+ +TY + +E + G +
Sbjct: 474 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 533
Query: 373 RKMAKSGEAI 382
++ GE I
Sbjct: 534 DELCSRGEEI 543
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 128/313 (40%), Gaps = 24/313 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++ + +Y+ +++ K VFK+L++ G P+ TYG + + + GK
Sbjct: 446 IDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKAL 505
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E R M + G TY +++ F + A A +M + G+ +Y +
Sbjct: 506 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAF 565
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C G A+ V++++ LRH +P TF +I G + + +F M+ C P
Sbjct: 566 CGMGNMDRAIQTVKEMQKLRH-RPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPT 624
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T NA++ KA E+ +E T A S +E+TY+ +++ A
Sbjct: 625 VHTFNALINGLVEKRQMEKAVEILDEMTLAGVSA-------------NEHTYTKIMQGYA 671
Query: 549 ----TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
T +EYF + G ++D + LL ++G+ A + A I
Sbjct: 672 SVGDTGKAFEYFTRLQN----EGLEVDIFTYEALLKACCKSGRMQ-SALAVTKEMSARNI 726
Query: 605 PHPLFFTEMLIQA 617
P F +LI
Sbjct: 727 PRNSFVYNILIDG 739
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 157/364 (43%), Gaps = 48/364 (13%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK---ELVKLIERMRQKPSKR----IK 299
A +F M+++ + PD+ Y+++ +G + + VK ++++R +P+ R I
Sbjct: 539 AFAVFEDMVKE-GMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 597
Query: 300 NMHRKNWD-----PVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
N K+ D V + P + +NA++N V Q + + ++ +G+
Sbjct: 598 NGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVS 657
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
+ TY M+ G E+F ++ G + TY+ L++A + G++ A+A
Sbjct: 658 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAV 717
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M R + + VY L G +A +++++K KP T+T I +
Sbjct: 718 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK-EGVKPDIHTYTSFISACS 776
Query: 467 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G ++ + M+ +PNI T ++K ++R + KA +EE
Sbjct: 777 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM---------- 826
Query: 526 LSGDGAPLKPDEYTY----SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
LKPD+ Y +S+L ++ A Y+Y G+ ++ C+ + A L+V+
Sbjct: 827 ---KAVGLKPDKAVYHCLLTSLLSRASIAEA-----YIYSGV-MTICK--EMVEAGLIVD 875
Query: 582 ASRA 585
A
Sbjct: 876 MGTA 879
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/385 (16%), Positives = 152/385 (39%), Gaps = 18/385 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P +Y ++++A + +++++ G++ S TY + + ++G +
Sbjct: 341 ITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAAD 400
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+F + + + + A Y ++ A + + A A VR ME+ G+ ++Y+ +
Sbjct: 401 HWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY 460
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ ++V +++K + P +T+ LI G I + + + MK+ + N
Sbjct: 461 TMVADEKKGLIVFKRLKECGFT-PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHN 519
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T + M+ + + ++ A +FE+ + +KPD Y++++ A
Sbjct: 520 LKTYSMMINGFVKLKDWANAFAVFEDMVKEG-------------MKPDVILYNNIIAAFC 566
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ K M + ++ +++G FD + G +P
Sbjct: 567 GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVH 626
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
F ++ + + EKAV +++ M A E +T++ + K + L
Sbjct: 627 TFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 686
Query: 669 CNCNAASSEITVSNLSRALHALCRS 693
N E+ + L A C+S
Sbjct: 687 QN---EGLEVDIFTYEALLKACCKS 708
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 177/451 (39%), Gaps = 74/451 (16%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++ IM Q G E L+ GL + G +A+ + + + + YT L
Sbjct: 249 YEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFA---DMTEDNCCPTVRTYTVL 305
Query: 235 LAILGKAGRPHEALRIFNLMLE-DC---------------------------------NL 260
+ L +GR EAL +FN M E C L
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 261 YPDIAAYHSVAVTLGQVGLLK---ELVKLIERMRQKPSKRIKN-----------MHR--- 303
P + Y+++ + G++ E++ L+E P+ R N +H+
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 304 ---KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
K + L P L+ YN++++ + + + + + ++GL P TY + ++ +
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ G+ + F + G + Y L+ + + GKI+ A + + M + +
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y L LC + ++A +V K+ ++ KP +T+T LI + G D + +F H
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMG-VKPTVVTYTILIGEMLKDGAFDHALKVFNH 604
Query: 481 MKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
M +P++ T A L Y M + ++ + N G + PD T
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI---AKMNEEG----------ILPDLVT 651
Query: 540 YSSMLEASA-TAHQWEYFEYVYKGMALSGCQ 569
Y+ +++ A F+++ K M +GC+
Sbjct: 652 YTVLIDGYARLGLTHRAFDFL-KCMVDTGCK 681
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 133/349 (38%), Gaps = 32/349 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P + Y ++ A S + +F ++++ G +P+ TY + ++ + + K D +
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M++ G +TY L+ + +EG I++A + ME Y EL C LC
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
+ AM ++ K+ R P IT+ LI ++ + M ++ P+
Sbjct: 417 KRKVHKAMALLNKMLE-RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW 475
Query: 491 TVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSGDGA--------------- 531
T + + + +A LF+ +AN YT L DG
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI-DGYCKVGKIDVAYSLLER 534
Query: 532 ----PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
P+ YTY+ ++E + + + M G + + L+ E + G
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594
Query: 588 CHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+HA F+ ++ G P +T L Q E+ +I M
Sbjct: 595 ---FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 141/363 (38%), Gaps = 24/363 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD Y +++ + + VF + + G + + +Y + + ++G+ +
Sbjct: 225 LHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEAL 284
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ F M + TY VL+ A G+ EA+ M+++G Y L L
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
C + +A ++ ++ S + P +T+ LI G IDD I M+ + C PN
Sbjct: 345 CKENKMDEARKMLSEM-SEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403
Query: 489 IGTVNAML-------KVYSRNDMFSKAKE------------LFEETTRANS--SGYTFLS 527
T N ++ KV+ + +K E L + N S Y LS
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463
Query: 528 -GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+ L PD++TYS ++ + E ++ + G + ++ + L+ + G
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
K + + +L +P+ + ++ + ++A +L+ M T +T
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583
Query: 647 ELF 649
L
Sbjct: 584 ILI 586
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 97/525 (18%), Positives = 191/525 (36%), Gaps = 100/525 (19%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++ + +MN++GL+ + + L +G +A ++ D V K K + +YT L
Sbjct: 459 YRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV---KAKGVKANEVIYTAL 515
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ K G+ A + ML D L P+ Y+ + L + +KE L+ +M
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACL-PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
K P +V Y ++ + + VF + G +P TY
Sbjct: 575 VK---------------PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ G + V + KM + G +TY VL+ + G + A
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA----------- 668
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD- 473
++ C+ + G +V IK+L H ++ T + + I S+ + D
Sbjct: 669 --------FDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDI 720
Query: 474 -----------CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
+ +F+ M +H C ++ A++ + + + +A+ L S
Sbjct: 721 ADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMS 780
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
P E Y+S+L+ C+L A LV
Sbjct: 781 -------------PSEDIYNSLLDCC--------------------CKLGVYAEAVRLV- 806
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
D+++E G +P + ++ ++ + EKA A+ + + ++
Sbjct: 807 --------------DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 852
Query: 642 ERQWTELFESNEDRISRDKLEKLLNALCNCNA-ASSEITVSNLSR 685
E W L + R D+ +L++ + +A A ++I + L R
Sbjct: 853 EVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMR 897
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 84/424 (19%), Positives = 166/424 (39%), Gaps = 45/424 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+P L YN +L + + V+ +L + + P+ T+ + + G
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ K+ ++G TY L+ ++ A M Q+G Y L L
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C GR +A+ + + + P T+T LI + G + +++F MK+ CEPN
Sbjct: 275 CEAGRINEALKLFADMTE-DNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEE-----------TTRANSSGYTFLSGDGAPLKPDE 537
+ T ++ + + +A+++ E T A GY +G + D
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC---KEG--MIDDA 388
Query: 538 YTYSSMLEASATAHQWEYFE----------YVYKGMALSGCQLDQTKHAWLLVEASRA-G 586
+ ++E+++ + V+K MAL L++ L+ S G
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448
Query: 587 KCHL--LEHAFD--SLL-EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
+C + LE A+ SL+ E G +P ++ + + E+A L +++
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Query: 642 ERQWTELFES----NEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKER 697
E +T L + + ++ LE++LN C N+ + + + LC+ +K +
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI-------EGLCKEKKMK 561
Query: 698 DLSS 701
+ SS
Sbjct: 562 EASS 565
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 182/436 (41%), Gaps = 38/436 (8%)
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD----LKS 227
AK F R + G E +++ LG R + ++V+ ++ K L
Sbjct: 109 AKALHFFRWVEAKGFTHNEQSYFLMIEILGRS---RNLNAARNFVFSIEKKSGGAVKLGD 165
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
RF + L+ G AG E++++F M ++ + P + ++S+ L ++
Sbjct: 166 RF-FNSLIRSYGWAGLFQESIKVFKTM-KEIGVSPSVVTFNSL------------LSIVL 211
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLK 346
+R R +K++ + + + PD +N ++ C+ S +G FW FK++ +
Sbjct: 212 KRGRTSMAKQLFDEMLDTYG--VTPDTYTFNILIRGFCMNSMVDEG-FWFFKEMSRFKCD 268
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG--ALTYKVLVRAFWEEGKINEAV 404
P TY ++ + ++GK + H + M K + +TY L+R + + + EA+
Sbjct: 269 PDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEAL 328
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ + M RG+ Y L LC + ++E + P T LI +
Sbjct: 329 SLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKA 388
Query: 465 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G +++ S+F+ M + +P+ T + +++ + F +A+E F+E
Sbjct: 389 HCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKE---- 444
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
L G KP Y+ M E + + + E V++ + G Q D + L++
Sbjct: 445 ILLHDVGC--KPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHC 501
Query: 584 RAGKCHLLEHAFDSLL 599
R G E FD L+
Sbjct: 502 REGTP---EAGFDLLV 514
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
F LI S G + I +F+ MK+ P++ T N++L + + S AK+LF+E
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
D + PD YT++ ++ + + +K M+ C D +
Sbjct: 228 ------------DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYN 275
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGE--IPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L+ RAGK + + +++ P+ + +T ++ ++ + +A++L+ M
Sbjct: 276 TLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMV 335
Query: 635 YAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
+ + L + + DK++++L +
Sbjct: 336 SRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM 369
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 25/226 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN--- 252
L+K G +A SV + + L+ + D + Y+ L+ L + G A F+
Sbjct: 385 LIKAHCTMGKLEEAFSVFEKMSELRVQPDSAT---YSVLVRSLCQRGDFRRAEEFFDELA 441
Query: 253 ---LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
++L D P +AAY+ + L G K+ ++ ++ M R DP
Sbjct: 442 EKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQL----------MKRGTQDPP 491
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L+ L C G + LR+ P A TYGL ++ +L+ G L H
Sbjct: 492 SYKTLI-----LGHCREGTPEAGFDLLVLMLRRD-FVPDAETYGLMIDGLLKKGDPVLAH 545
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ KM KS + ++ A E+G +E+ + V+ M +R +
Sbjct: 546 KSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRI 591
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/483 (20%), Positives = 199/483 (41%), Gaps = 56/483 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+W++A++V + DL + + +L+ + +AL F LM
Sbjct: 227 LINACGSSGNWKEALNVCKKMTENGVGPDLVTHNI---ILSAFKSGAQYSKALSYFELM- 282
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM-------------- 301
+ ++ PD + V L ++ + +++ MR+K S+ ++
Sbjct: 283 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCG 342
Query: 302 HRKNWDPV--------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+N + L+P++V YNA++ A F +++++G +P +Y
Sbjct: 343 QVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYT 402
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +S K + F +M ++ ++Y L+ A+ G + +A+ +R MEQ
Sbjct: 403 SLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQE 462
Query: 414 GV-VGTASVYYELACC-LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
G+ S+ LA C C+ D +L +++ ++ + + + I S M+ G
Sbjct: 463 GIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNT---VAYNAAIGSCMNVGEY 519
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE--------TTRANSSG 522
D I +++ M K + + T ++ + + +A EE + SS
Sbjct: 520 DKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSA 579
Query: 523 YTFLSGDGAPLK--------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
S G ++ PD TY++ML+A A WE +++ M S
Sbjct: 580 ICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSI 639
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP-LFFTEMLIQAIVQSNYEKAV 627
+LD A L+ ++ G+ + +S+ E EIP F EM+ + ++ AV
Sbjct: 640 KLDTIACAALMRSFNKGGQPGRVLSLAESMREK-EIPFSDTIFFEMVSACSILQDWRTAV 698
Query: 628 ALI 630
+I
Sbjct: 699 DMI 701
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/451 (18%), Positives = 183/451 (40%), Gaps = 55/451 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L+K L +GS V W LK++++ ++R +Y ++ + + R +A +F
Sbjct: 121 LIKELTQRGSIEHCNRVFRW---LKNQKNYRARNDIYNMMIRLHARHNRTDQARGLF-FE 176
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ PD+ Y+++ G+ G + + +++ M + + P
Sbjct: 177 MQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLR---------------AAIPPSR 221
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN ++NAC S WK V K++ ++G+ P T+ + + +Y +F
Sbjct: 222 STYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFEL 281
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG-------VVGTASVYYELAC 427
M + T +++ + + ++A+ +M ++ V T+ ++ C
Sbjct: 282 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVC 341
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
N M++ E + KP +++ LI + G ++ F +K +
Sbjct: 342 GQVENCEAAFNMMIAEGL------KPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFR 395
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+I + ++L Y R+ KA+++F+ R LKP+ +Y+++++A
Sbjct: 396 PDIVSYTSLLNAYGRSQKPHKARQIFDRMKR-------------NKLKPNLVSYNALIDA 442
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP- 605
+ + + M G Q + LL R + + D++L A E+
Sbjct: 443 YGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSR----KVKIDTVLTAAEMRG 498
Query: 606 ---HPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ + + + + Y+KA+ L +M
Sbjct: 499 IKLNTVAYNAAIGSCMNVGEYDKAIGLYKSM 529
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 102/258 (39%), Gaps = 29/258 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G + +A+S ++ + LK S+ VY+ + K G+ EA FNLM
Sbjct: 544 LISGCCKMSKYGEALSFMEEIMHLKLPL---SKEVYSSAICAYSKQGQIVEAESTFNLM- 599
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK------------------- 296
+ YPD+ Y ++ ++ L E M K
Sbjct: 600 KSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQP 659
Query: 297 -RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
R+ ++ + + ++ +++AC W+ + K + S S+
Sbjct: 660 GRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWRTAVDMIKYIEPSLPVISSGCLNQF 719
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + +SGK + + + F KM SG + TY +L++ G + + ++ ME G+
Sbjct: 720 LHSLGKSGKIETMLKLFFKMLASGADVNLNTYSILLKNLLSSGNWRKYLEVLQWMEDAGI 779
Query: 416 VGTASVYYELA-----CC 428
+ +Y++++ CC
Sbjct: 780 HPSKEMYHDISSFSQKCC 797
>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 375
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 154/371 (41%), Gaps = 35/371 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + + G + + A++ + M + +G+ D V
Sbjct: 21 VSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGSR-NVASFNIMMRGLFDNGEVDQVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M ++G ++TY +LV + G N+++ + E +G V A Y + L
Sbjct: 80 SIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLDAFSYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
C + +A+ V+ + KP + LI + +D +F+ M HC PNI
Sbjct: 140 CKEAKLDEAVSVLSGMVK-NGCKPNTHVYNALINGFVGASKFEDATRVFREMGTHCSPNI 198
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N ++ + + F +A +L +E G+ KP TYS +++
Sbjct: 199 VTYNTLINGLCKGERFGEAYDLVKEMLE---KGW----------KPGVSTYSLLMKGLCL 245
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
H+ + ++ + G + D H L+ GK L + ++ P+ +
Sbjct: 246 GHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVT 305
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESN--EDRISRDKLEKLLNA 667
+ ++ + K L NA+A W + + D IS + L
Sbjct: 306 YNTLM------EGFYKDGDLRNALAI---------WAHILRNGLQPDIISYN---ITLKG 347
Query: 668 LCNCNAASSEI 678
LC+CN S I
Sbjct: 348 LCSCNRISGAI 358
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 88/216 (40%), Gaps = 20/216 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G +++ VL+ G K + F Y+ ++ L K + EA+ + + M+
Sbjct: 100 LVDGLCKNGYANKSLHVLEIAEG---KGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMV 156
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ P+ Y+++ ++ ++ M S P++V
Sbjct: 157 KN-GCKPNTHVYNALINGFVGASKFEDATRVFREMGTHCS----------------PNIV 199
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++N ++ + + K++ + G KP +TY L M+ + K D+ + ++
Sbjct: 200 TYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKLDMAINLWNQV 259
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
G + +L+ GK A++ NM
Sbjct: 260 IAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMN 295
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 155/384 (40%), Gaps = 38/384 (9%)
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
P+ F++ QL +GL P A + + M +++ G+ F +M G +
Sbjct: 95 PTAPEACAFYL--QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVV 152
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
++ ++ G ++ A R M + GV Y L LC GR +DA V EK+
Sbjct: 153 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 212
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 504
R KP + FT LI + G + + + + M++ P+ T NA++ R
Sbjct: 213 CG-RGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARD 271
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
A + E A L+PD TY+++++ + + + + M
Sbjct: 272 LKSASGIVVEMRSAG-------------LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV 318
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV-QSNY 623
G LD+ + L+ S+AG+ E ++EAG P +T M+I A + +
Sbjct: 319 AEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYT-MVIDAFCRKGDV 377
Query: 624 EKAVALINAM-------AYAPFHITERQWTELFE-SNEDRISRDKLEKLLNALCNCNAAS 675
+ + L+ M +++ + +L + N D LLNA+ N +
Sbjct: 378 KTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNAD--------MLLNAMINIGVSP 429
Query: 676 SEITVSNLSRALHALCRSEKERDL 699
+IT + L L C+ K D+
Sbjct: 430 DDITYNIL---LDGHCKHGKVTDI 450
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 123/283 (43%), Gaps = 25/283 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L G A +V D + +R + S + +++ + +AG A + M
Sbjct: 122 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVS---FNTMISGMCRAGDLDGAETLHRRMS 178
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--------------------RQKPS 295
E + PD+ Y ++ L +VG +++ + E+M ++ +
Sbjct: 179 E-AGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 237
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + +HR+ + + PD V YNA++N + K + ++R +GL+P TY
Sbjct: 238 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 297
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + + D+ E + M G + +TY L+ + G+ +A + M + G+
Sbjct: 298 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGL 357
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+ Y + C G + + +++++++ + KP +T+
Sbjct: 358 EPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQN-KGRKPGVVTY 399
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 183/426 (42%), Gaps = 43/426 (10%)
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD----LKSR 228
K ++F +++G +L LG G+ A ++++ ++ + + ++ R
Sbjct: 42 KAFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIAR---NFLFSIERRSNGSVKIEDR 98
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F T LL G AG +EA+++F+LM + + P + ++S+ L+ L++
Sbjct: 99 FCNT-LLRSYGNAGLFNEAIKLFSLM-KSSGVSPSVITFNSL------------LLILLK 144
Query: 289 RMRQKPSKRIKNMHRKNWDPV-----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
R R NM +D + + PD +N ++ + F FK++ +
Sbjct: 145 RGRT-------NMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRF 197
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG--ALTYKVLVRAFWEEGKIN 401
+P TY ++ + ++GK + H + M K + + +TY LVR + + +I+
Sbjct: 198 NCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEID 257
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
EA+ M RG+ Y L LC ++ ++ R P T+ L
Sbjct: 258 EALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTL 317
Query: 462 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
+ + D G+ D+ + +F+ MK+ +P+ T + +++ + F +A++LF++ + +
Sbjct: 318 MNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDED- 376
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
L DG P Y+ + + + E V++ + G Q D + L++
Sbjct: 377 ---ILLRDDGC--TPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLII 430
Query: 581 EASRAG 586
+ G
Sbjct: 431 GHCKEG 436
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 19/284 (6%)
Query: 322 NACVPSHQWKGVF----WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N + S+ G+F +F ++ SG+ PS T+ + ++L+ G+ ++ H F +M
Sbjct: 101 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG 160
Query: 378 S-GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ G T+ +L+R F + ++E + M + Y L LC G+ +
Sbjct: 161 TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVR 220
Query: 437 DAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
A VV+ +K ++ P +T+T L+ ID+ + +F+ M +PN T N
Sbjct: 221 IAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNT 280
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++K F K KE+ + G G PD TY++++ A A ++
Sbjct: 281 LIKGLCEVQKFDKIKEIL-----GGAVG-------GRGFVPDTCTYNTLMNAQCDAGNFD 328
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
++K M Q D ++ L+ + G E FD L
Sbjct: 329 EALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKL 372
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 114/291 (39%), Gaps = 26/291 (8%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+ +L+ + M + ++F + M++ L+ GL G R A +V+
Sbjct: 167 DTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVV 226
Query: 214 DWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+ +K +DL V YT L+ EAL +F M+ L P+ Y+++
Sbjct: 227 KGM--VKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSR-GLKPNDITYNTLIK 283
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L +V QK K + + PD YN ++NA + +
Sbjct: 284 GLCEV--------------QKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDE 329
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA-------KSGEAIGAL 385
+FK++++ ++P +ATY + + + Q G ++ + F K++ G
Sbjct: 330 ALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVA 389
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
Y + + GK ++A R + ++G S Y L C G ++
Sbjct: 390 AYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPS-YKTLIIGHCKEGTFE 439
>gi|356565780|ref|XP_003551115.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 622
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 175/410 (42%), Gaps = 51/410 (12%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ G D + ++SR TK++ IL K+G+P EA+ IF ++E + P +A Y ++ L
Sbjct: 120 FCMGKNDCQVVQSR---TKVMNILIKSGKPQEAIVIFQNLIEGGH-QPSLATYTTLLNAL 175
Query: 275 GQVGLLK---ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
K +V L+E + KP R +NA++NA +
Sbjct: 176 TTQKYFKPIHSIVSLVEEKQMKPDSRF------------------FNALVNAFAEFGNIE 217
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL-TYKVL 390
V +++++SGLKPSA TY ++ +GK D + M+ G L T +L
Sbjct: 218 DAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESIKLLDLMSIEGNVKPNLKTCNML 277
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+RA + +EA V M G+ + +A NG+ + V I +R
Sbjct: 278 IRALCKMEHTSEAWNVVYKMTTSGMQPDVVSFNTVAISYAQNGK---TVQVEAMILEMRR 334
Query: 451 S--KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN---DM 504
+ KP + T T +I G + + + +KD +PN+ +N+++ + D
Sbjct: 335 NGLKPNDRTCTIIISGYCREGKVREALRFVYRIKDLGLQPNLIILNSLVNGFVDTMDRDG 394
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
++ L EE ++PD TYS+++ A + A E + +Y M
Sbjct: 395 VNEVLNLMEEFY----------------IRPDVITYSTIMNAWSQAGFLEKCKEIYNNML 438
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
SG + D ++ L RA + E + ++G P+ + FT ++
Sbjct: 439 KSGVKPDGHAYSILAKGYVRAQEMEKAEELLTVMTKSGVQPNVVIFTTVM 488
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 156/367 (42%), Gaps = 27/367 (7%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK+ + ++ LV+ +E K V+ M +SGL + L+KG G G
Sbjct: 193 EKQMKPDSRFFNALVNAFAEFGNIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPD 252
Query: 208 QAMSVLDWVYGLKD-KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+++ +LD + + K +LK+ L+ L K EA + M + PD+ +
Sbjct: 253 ESIKLLDLMSIEGNVKPNLKT---CNMLIRALCKMEHTSEAWNVVYKMTTS-GMQPDVVS 308
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW----------------- 306
+++VA++ Q G ++ +I MR+ KP+ R + +
Sbjct: 309 FNTVAISYAQNGKTVQVEAMILEMRRNGLKPNDRTCTIIISGYCREGKVREALRFVYRIK 368
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D L+P+L++ N+++N V + GV V + + ++P TY M Q+G +
Sbjct: 369 DLGLQPNLIILNSLVNGFVDTMDRDGVNEVLNLMEEFYIRPDVITYSTIMNAWSQAGFLE 428
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
E + M KSG Y +L + + ++ +A + M + GV ++ +
Sbjct: 429 KCKEIYNNMLKSGVKPDGHAYSILAKGYVRAQEMEKAEELLTVMTKSGVQPNVVIFTTVM 488
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
C+ GR +AM V +K+ S L+ TF LI + + Q M++ H
Sbjct: 489 SGWCSVGRMDNAMRVFDKMGEFGVSPNLK-TFETLIWGYAEAKQPWKAEGMLQIMEEFHV 547
Query: 486 EPNIGTV 492
+P T+
Sbjct: 548 QPKKSTI 554
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 112/282 (39%), Gaps = 25/282 (8%)
Query: 172 AKNWKFVRI------MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDL 225
A+N K V++ M ++GL + ++ G +G R+A L +VY +KD
Sbjct: 317 AQNGKTVQVEAMILEMRRNGLKPNDRTCTIIISGYCREGKVREA---LRFVYRIKDLGLQ 373
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+ + L+ + NLM E+ + PD+ Y ++ Q G L++ +
Sbjct: 374 PNLIILNSLVNGFVDTMDRDGVNEVLNLM-EEFYIRPDVITYSTIMNAWSQAGFLEKCKE 432
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ M + K PD Y+ + V + + + + + KSG+
Sbjct: 433 IYNNMLKSGVK---------------PDGHAYSILAKGYVRAQEMEKAEELLTVMTKSGV 477
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
+P+ + M G+ D F KM + G + T++ L+ + E + +A
Sbjct: 478 QPNVVIFTTVMSGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEG 537
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
++ ME+ V S +A C G + A ++ +K+
Sbjct: 538 MLQIMEEFHVQPKKSTILLVAEAWCFAGLKEGAKTLLITVKT 579
>gi|255561941|ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538783|gb|EEF40383.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 151/388 (38%), Gaps = 50/388 (12%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
L+ L +KG A ++D + + + + T L+ K + ++A RI +M+
Sbjct: 105 LQHLCNKGRLMDAPRLIDV---MARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVM 161
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
+ PD+ Y+ + L + G LK + L+E M PD+V
Sbjct: 162 SGGV-PDVITYNMMVGGLCKRGKLKSAIDLLEDMSLSGCP---------------PDVVT 205
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN ++ + + +K+ + G P TY + +E++ + E MA
Sbjct: 206 YNTIIRCMFHNANFDQAVRFWKEQLRRGCPPYLITYTILIELVCKHCGTVRAMEVLEDMA 265
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G +TY LV ++GK +A + NM G+ A Y L LC+ G W
Sbjct: 266 IEGCYPDLVTYNSLVNFTCKQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWD 325
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 495
+ ++ +K H P +T+ LI G ++ I F M ++C P+I T N +
Sbjct: 326 EVDEILTVMKETSHP-PTVVTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTL 384
Query: 496 LKVYSRNDMFSKAKELFEETT-----------RANSSGY-TFLSG--------------- 528
L + + + FE+ R NS Y + + G
Sbjct: 385 LGALCKEECWMSPSSQFEDAVEILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLE 444
Query: 529 --DGAPLKPDEYTYSSMLEASATAHQWE 554
+ KPDE YS+++ + A A E
Sbjct: 445 IMISSRCKPDEEIYSALINSLADAGMME 472
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 26/253 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
YT L+ ++ K A+ + ++ +E C YPD+ Y+S+ + G ++ +I
Sbjct: 239 ITYTILIELVCKHCGTVRAMEVLEDMAIEGC--YPDLVTYNSLVNFTCKQGKYEDAALII 296
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
M +EP+ + YN +L++ W V + ++++ P
Sbjct: 297 INMLSHG---------------MEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPP 341
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE-------GKI 400
+ TY + + +SG + +FF +M +TY L+ A +E +
Sbjct: 342 TVVTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQF 401
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+AV +R M +R + Y + LCNN + A+ V+E + S R KP E ++
Sbjct: 402 EDAVEILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIMISSR-CKPDEEIYSA 460
Query: 461 LIISSMDGGHIDD 473
LI S D G +++
Sbjct: 461 LINSLADAGMMEE 473
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 84/208 (40%), Gaps = 9/208 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PDLV YN+++N +++ + + G++P+A TY + + G +D V E
Sbjct: 271 PDLVTYNSLVNFTCKQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEI 330
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
M ++ +TY L+ + G +N A+ M + Y L LC
Sbjct: 331 LTVMKETSHPPTVVTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCK 390
Query: 432 NGRW-------QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KD 483
W +DA+ ++ ++ R + + +I + D I + + M
Sbjct: 391 EECWMSPSSQFEDAVEILREMGK-RDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIMISS 449
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
C+P+ +A++ + M +A EL
Sbjct: 450 RCKPDEEIYSALINSLADAGMMEEANEL 477
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 169/406 (41%), Gaps = 34/406 (8%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++F ++M ++ + L+ GL G +A + W + L +K S+ L
Sbjct: 438 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL--W-FRLLEKGSPASKVTSNAL 494
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L AG+ EA RI MLE L D Y+++ + G ++ +L E M ++
Sbjct: 495 IHGLCGAGKLPEASRIVKEMLER-GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 553
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
++PD+ YN +L + ++ + + SGL + TYG+
Sbjct: 554 ---------------IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 598
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
ME ++ + + V F ++ + ++ Y ++++A + G + A+ + NM+ +G
Sbjct: 599 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG 658
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
++ + Y L +CN G +DA ++++++ P + +T LI G +D
Sbjct: 659 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRK-EGFVPNVVCYTALIGGYCKLGQMDTA 717
Query: 475 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
S + M + PN T M+ Y + KA L + SG +
Sbjct: 718 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLL---IKMKESG----------I 764
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
PD TY+ + A+ + V MA G +D+ + L+
Sbjct: 765 VPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 34/265 (12%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+D Y L K S LL+ L KA + +F +M E PD+ ++ +V
Sbjct: 194 VDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE--GACPDVFSFTNVIN 251
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L + G ++ ++L +M + + P++V YN ++N + +
Sbjct: 252 ALCKGGKMENAIELFMKMEKLG---------------ISPNVVTYNCIINGLCQNGRLDN 296
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
F + +++ G++P+ TYG + +++ +D V+ +M SG + + L+
Sbjct: 297 AFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLID 356
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
+ + G I A+ M + + T+ Y L C + + + A +E+I S
Sbjct: 357 GYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILS----- 411
Query: 453 PLEITFTGLIISSMDGGHIDDCISI 477
+GL I H D+C S+
Sbjct: 412 ------SGLSI------HPDNCYSV 424
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 128/343 (37%), Gaps = 36/343 (10%)
Query: 326 PSHQWKGVFWVFKQLR------------KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
P + + V W+ K+ R +PS + + + + GK+ E +
Sbjct: 418 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWF 477
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
++ + G +T L+ GK+ EA V+ M +RG+ Y L CN G
Sbjct: 478 RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 537
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTV 492
+ + + E++ R +P T+ L+ + G +DD I ++ K NI T
Sbjct: 538 KVEGCFRLREEMTK-RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTY 596
Query: 493 NAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFL------SGDGAP---------- 532
M++ Y + + + LF E NS Y + +G+ A
Sbjct: 597 GIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 656
Query: 533 --LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ P+ TYSS++ E +++ M G + + L+ + G+
Sbjct: 657 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDT 716
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
E + ++ P+ +T M+ N EKA L+ M
Sbjct: 717 AESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKM 759
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 182/434 (41%), Gaps = 70/434 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF---- 251
L+ GLG +G A S+ + + D + + VYT L+ K GR + +I+
Sbjct: 488 LIDGLGRRGRVDDAYSLYE---KMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMV 544
Query: 252 ------NLML----EDC--------------------NLYPDIAAYHSVAVTLGQVGLLK 281
+LML DC L PD+ +Y + L + G +
Sbjct: 545 HRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSR 604
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
E KL M+++ L D++ YN V++ S + + + ++++
Sbjct: 605 ETYKLFYEMKEQG---------------LHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
GL+P+ TYG ++ + + + D + F + G + + Y L+ F + G+I+
Sbjct: 650 TKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID 709
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
EA + + Q+G+ + + L L +A + + +K+L+ S P +T++ +
Sbjct: 710 EAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCS-PNAMTYSIM 768
Query: 462 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
I + +Q M K +PN T M+ ++ +A+ LF+ R +
Sbjct: 769 INGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFD---RFKA 825
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
SG PD Y++M+E ++A++ V++ L GC+++ +K +L+
Sbjct: 826 SGGV----------PDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVN-SKTCVVLL 874
Query: 581 EASRAGKCHLLEHA 594
+A C LE A
Sbjct: 875 DALHKADC--LEQA 886
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 162/385 (42%), Gaps = 31/385 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ L+ LG+ GR +A ++ ML D + P++ Y S+ + G ++ K+ + M
Sbjct: 485 FCSLIDGLGRRGRVDDAYSLYEKML-DSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM 543
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+HR PDL++ N+ ++ + + + +F++++ GL P
Sbjct: 544 ----------VHRG-----CSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVR 588
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+Y + + ++++G ++ F +M + G + L Y ++ F + GK+++A + M
Sbjct: 589 SYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEM 648
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ +G+ T Y + L R +A ++ E+ KS+ + + ++ LI G
Sbjct: 649 KTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV-VIYSSLIDGFGKVGR 707
Query: 471 IDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
ID+ I + M+ PN T N +L + + +A+ F+ S
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCS-------- 759
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
P+ TYS M+ ++ ++ M G + + + ++ ++AG
Sbjct: 760 -----PNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVM 814
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEML 614
FD +G +P + M+
Sbjct: 815 EARGLFDRFKASGGVPDSACYNAMI 839
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 134/317 (42%), Gaps = 32/317 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L A RP L +F+ M ++ ++ + ++ + G + + L++ M
Sbjct: 206 YTTLIGALSAANRPDPMLTLFHQM-QEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEM 264
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ DLV+YN ++ + + F +++ GL P
Sbjct: 265 KSNS---------------FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDV 309
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + V+ ++ + D E F ++ + Y ++ + GK +EA + +
Sbjct: 310 TYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQ 369
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+++G + + Y + CL G+ ++A+ + ++++ + + P T+ LI G
Sbjct: 370 KRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR--QDAAPNLTTYNILIDMLCKAGE 427
Query: 471 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
++ + + MK+ PNI TVN M+ D KA++L E + FL D
Sbjct: 428 LEAALKVQDTMKEAGLFPNIMTVNIMI------DRLCKAQKLDEACS-------IFLGLD 474
Query: 530 GAPLKPDEYTYSSMLEA 546
PD T+ S+++
Sbjct: 475 HKVCSPDSRTFCSLIDG 491
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 152/362 (41%), Gaps = 40/362 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNL---YPDIAAYHSVAVTLGQVGLLKELVKLI 287
YT L+ +L KA R EA+ +F E+ +L P + AY+++ + G G E L+
Sbjct: 311 YTTLIGVLCKARRLDEAVELF----EELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLL 366
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
ER ++K P ++ YN +L + + + ++R+ P
Sbjct: 367 ERQKRKGCI---------------PSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-AP 410
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + ++++ ++G+ + + M ++G +T +++ + K++EA +
Sbjct: 411 NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIF 470
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
++ + + + L L GR DA + EK+ P + +T LI +
Sbjct: 471 LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD-SDQIPNVVVYTSLIQNFFK 529
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +D I++ M C P++ +N+ + + K + LFEE +
Sbjct: 530 CGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEE-----------I 578
Query: 527 SGDGAPLKPDEYTYSSMLEASATA-HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
G L PD +YS ++ A E ++ Y+ M G LD + ++ ++
Sbjct: 579 KAQG--LVPDVRSYSILIHGLVKAGFSRETYKLFYE-MKEQGLHLDVLAYNTVIDGFCKS 635
Query: 586 GK 587
GK
Sbjct: 636 GK 637
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 126/318 (39%), Gaps = 28/318 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ L + + + +K M + GL ++ G G +A +L+ +
Sbjct: 592 ILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEE---M 648
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K K + Y ++ L K R EA +F + + ++ Y S+ G+VG
Sbjct: 649 KTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFE-EAKSIGVDLNVVIYSSLIDGFGKVGR 707
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ E ++E + QK L P+ +N +L+A V + + F+
Sbjct: 708 IDEAYLILEELMQKG---------------LTPNSYTWNCLLDALVKAEEIDEAQVCFQN 752
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ P+A TY + + + K++ F+++M K G +TY ++ + G
Sbjct: 753 MKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGN 812
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE--KIKSLRHSKPLEIT 457
+ EA + G V ++ Y + L + + DA +V E ++K R + +
Sbjct: 813 VMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVV 872
Query: 458 FTGLIISSMDGGHIDDCI 475
+D H DC+
Sbjct: 873 L-------LDALHKADCL 883
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 169/407 (41%), Gaps = 41/407 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
VY L+ L + + EAL++ + + C PD+ ++ V L +V + + KL++
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFVMGC--MPDVQTFNDVIHGLCKVNKIHDATKLVD 312
Query: 289 RMRQK---PSK-----------RIKNMH--RKNWDPVLEPDLVVYNAVLNACVPSHQWK- 331
RM + P RI ++ RK + P+ + N ++N V S Q K
Sbjct: 313 RMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKE 372
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
++ + + G +P TY + M + + G + +M++ G +TY +LV
Sbjct: 373 AQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILV 432
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ G + EA + M RG+ + +Y L C LC + A+ ++ ++ + +
Sbjct: 433 NGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT-KGC 491
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
KP T+ LI ID+ +F +M D N T N ++ R F KA
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
L + G T D+ TY+ +++A E +Y+ M + G
Sbjct: 552 LVNDML---FRGCTL----------DKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGA 598
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEML 614
D ++ + GK +++AF+ L +A G +P + + +L
Sbjct: 599 DTISCNIMINGLCKVGK---VDNAFEFLRDAINRGFVPDIVTYNSVL 642
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 126/624 (20%), Positives = 235/624 (37%), Gaps = 126/624 (20%)
Query: 135 GSDYFAKNVEWHPEKRWRSEAEAI--------RVLVD-----RLSEREMTAKNW--KFVR 179
GSD NVE P W S E R+L+ +L E + F R
Sbjct: 42 GSDPIKMNVESEPATEWESLLEPFDLTKLRKSRILITPVQLCKLLELPLDVPTLLEIFER 101
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+ Q G T + LG G ++ +L +K++ + ++ ++ G
Sbjct: 102 VGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLL---MQMKEEGIVFRESIFMIIMKHYG 158
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KAG+P +A+R L D+ A +
Sbjct: 159 KAGQPGQAIR----------LLLDMRAVY------------------------------- 177
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ EP Y+ VL V + + VF + G+ P+ T+G+ M+ +
Sbjct: 178 ---------LCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ D R M K G ++ Y+ L+ A ++ +++EA+ + M G +
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDV 288
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
+ ++ LC + DA +V+++ LR P +T+ L+ G +++ I
Sbjct: 289 QTFNDVIHGLCKVNKIHDATKLVDRML-LRGFYPDNMTYGFLLHGLCRIGKLNEARKIL- 346
Query: 480 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
+K C PN +N ++ Y + +A+ ET + G+ +PD +T
Sbjct: 347 -IKIPC-PNNAILNTLINGYVMSGQLKEAQSFLNETMI--NFGF----------QPDIFT 392
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
Y+ ++ + + M+ GC+ + +A L+ +AG LLE
Sbjct: 393 YNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAG---LLE------- 442
Query: 600 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA-----YAPFHITERQWT-----ELF 649
EAG + H + + I +++ + LI A+ + ++ T +LF
Sbjct: 443 EAGLVLHEMSARGLTINSVIYN------CLICALCRKEKVHVALNLLSEMCTKGCKPDLF 496
Query: 650 ESNE--------DRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS---EKERD 698
N DRI D+ +L + + A ++ +T + L +HAL R +K
Sbjct: 497 TYNSLIYGLCKVDRI--DEAFRLFHNMLLDGAVANNVTYNTL---IHALLRRGAFQKALT 551
Query: 699 LSSSAHFGSQAIDISPLHGIHEAF 722
L + F +D +G+ +AF
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKAF 575
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 115/286 (40%), Gaps = 26/286 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G +A VL + R L + +Y L+ L + + H AL NL+
Sbjct: 431 LVNGLCKAGLLEEAGLVLHEM----SARGLTINSVIYNCLICALCRKEKVHVAL---NLL 483
Query: 255 LEDCN--LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
E C PD+ Y+S+ L +V + E +L H D +
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRL--------------FHNMLLDGAVAN 529
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+ V YN +++A + ++ + + G TY ++ + G + E +
Sbjct: 530 N-VTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M G ++ +++ + GK++ A +R+ RG V Y + LC
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
GR ++A+ + ++++ + +P T+ I G ++D S F
Sbjct: 649 GRIKEALNLFDRLQ-VEGVRPDAFTYNTFISWQCKEGMVNDACSFF 693
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L +G++++A+++++ + D + Y L+ K G + L ++ M+
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLD---KITYNGLIKAFCKVGNIEKGLELYEQMI 592
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D L D + + + L +VG + + + R + PD+V
Sbjct: 593 MD-GLGADTISCNIMINGLCKVGKVDNAFEFL---------------RDAINRGFVPDIV 636
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN+VLN + K +F +L+ G++P A TY + + G + FF +
Sbjct: 637 TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRG 696
Query: 376 AKSGEAIGALTYKVLVRAFWEE 397
++G LT+ VLV ++
Sbjct: 697 IENGFVPSNLTWNVLVYTLLKQ 718
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 176/450 (39%), Gaps = 59/450 (13%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
+GS + +D ++G + R SR+ R + M+E + P
Sbjct: 144 RGSVCNLVVYIDCIFGFCEARCQSSRY-----------------ECRDGDEMIESGRI-P 185
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ Y++ L + G L + ++++E M + + PD+V + ++++
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGG---------------IPPDVVTFCSIIS 230
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM--AKSGE 380
+++ F VFK + + G P + TY + ++ + ++ + D V E M K+G
Sbjct: 231 GLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGC 290
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ T+ + A GK A + M + G + Y + LC +G DA
Sbjct: 291 VMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWK 350
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKV 498
+ K+ KP I F LI G + + MK + C P++ T N ++
Sbjct: 351 LSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDG 410
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
S+ +AK L +E KP+ TY++++ A +E E
Sbjct: 411 QSKFGSLKQAKLLLQEMQAVGC-------------KPNVVTYAALINGYAKHGMYEEAES 457
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT-EMLIQA 617
++ M+ GC D + +L S+AG E + L P T +LI
Sbjct: 458 LFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDG 517
Query: 618 IVQS-NYEKAVALINAMAYAPFHITERQWT 646
++ + E+ + L+ M T R W+
Sbjct: 518 YCRAEDTEQGLTLLQEM-------TARGWS 540
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 140/337 (41%), Gaps = 46/337 (13%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
+K D P++V Y A+++ + + K++ +SG +P TY + + +
Sbjct: 34 QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 93
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+ D +++ ++G A +TY LV ++++A +R M RG V VY
Sbjct: 94 NRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVY 153
Query: 423 YELACCL-------CNNGRWQ----DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+ C+ C + R++ D M+ +I P +T+ I G +
Sbjct: 154 ID---CIFGFCEARCQSSRYECRDGDEMIESGRI-------PDVVTYNTFISGLCKAGKL 203
Query: 472 DDCISIFQHM-KDHCEPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
D + + + M + P++ T ++ + K +D F K + E
Sbjct: 204 DKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGC---------- 253
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL--SGCQLDQTKHAWLLVEASR 584
PD TYS ML+ + A++ + + V + M +GC ++ H + R
Sbjct: 254 -------VPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCR 306
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
+GK L ++ ++E+G +P+ L + +I + +S
Sbjct: 307 SGKFPLAKNILLGMIESGSLPNLLSY-NFVIDGLCKS 342
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 115/294 (39%), Gaps = 58/294 (19%)
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
+G S TY ++ + +SG D +KMA +G A +TY L+ + + ++
Sbjct: 4 NGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHD 63
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGL 461
A+ V+ M + G Y L LC R DA LV++++ +R+ P IT++ L
Sbjct: 64 AIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQEL--VRNGFAPNHITYSTL 121
Query: 462 IISSMDGGHID----------------------DCISIF-----QHMKDHCE-------- 486
+I + +D DCI F Q + C
Sbjct: 122 VIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIES 181
Query: 487 ---PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
P++ T N + + K E+ EE R G P PD T+ S+
Sbjct: 182 GRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG-----------GIP--PDVVTFCSI 228
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC----HLLEH 593
+ A++ + V+KGM GC D ++ +L SRA + +LEH
Sbjct: 229 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEH 282
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/305 (18%), Positives = 131/305 (42%), Gaps = 19/305 (6%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ + G+ + L + Y ++ L K+G +A ++ ML+ PD+ ++++
Sbjct: 315 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 374
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
+ G L + +L+ M+ K + PD+V YN +++ K
Sbjct: 375 FCKAGRLSQAHQLLIEMKAKN--------------ICVPDVVTYNTLIDGQSKFGSLKQA 420
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ ++++ G KP+ TY + + G Y+ F +M+ G +TY ++ A
Sbjct: 421 KLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSA 480
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGT--ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
F + G +++A + ++ + + A Y L C + + +++++ + R
Sbjct: 481 FSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTA-RGW 539
Query: 452 KPLEITFTGLIISSMDGGHI-DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
T+ LI + + ++++Q M D C P+ N++++++ R + A+
Sbjct: 540 SCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSAR 599
Query: 510 ELFEE 514
+ +E
Sbjct: 600 SMVQE 604
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 188/446 (42%), Gaps = 48/446 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L GL KG +A D + +K+K +R + L+ + G EA + LM
Sbjct: 238 ILDGLCKKGRLNEAR---DLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMS 294
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ ++ PD Y+ + + G + E ++L E M +N+ L PD+V
Sbjct: 295 QN-SVVPDAWTYNVMISGFCKQGRIAEAMRLREEM--------ENLK-------LSPDVV 338
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++N C + F + +++ G+KP++ TY + ++ ++ GK D V + RKM
Sbjct: 339 TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKM 398
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+SG +TY L+ + GK++EA + M ++G+ + LC +
Sbjct: 399 EESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKL 458
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
+A ++ + R E+++ LII + ++ MK+ P+I T N+
Sbjct: 459 DEAHDLLCSARR-RGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNS 517
Query: 495 ML----KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
M+ ++ N K EL E SG L PDE TY++++
Sbjct: 518 MIAGLCQMGKTNQAIDKLDELLE-------SG----------LVPDEITYNTIIHGYCQE 560
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHP 607
Q E + M + D LL + G +LE A F++ + G+
Sbjct: 561 GQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEG---MLEKALKLFNTWISKGKDVDA 617
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAM 633
+ + +++ + + +A L+ M
Sbjct: 618 VSYNTIILSLCKEKRFGEAFDLLEEM 643
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 152/425 (35%), Gaps = 94/425 (22%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y +L L K GR +EA R L +++ L+P+ ++ + V ++G LKE +IE
Sbjct: 233 ITYNTILDGLCKKGRLNEA-RDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIE 291
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M Q + PD YN +++ + + +++ L P
Sbjct: 292 LMSQNS---------------VVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPD 336
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + G + + +M G ++TY V+V+ F ++GK++E VR
Sbjct: 337 VVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR 396
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
ME+ G + Y L C G+ +A +++++ G
Sbjct: 397 KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM-------------------GRKG 437
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+DD T+N ML+ R +A +L A GY
Sbjct: 438 LKMDDV----------------TLNTMLRALCRERKLDEAHDLL---CSARRRGYFV--- 475
Query: 529 DGAPLKPDEYTYSSML-------EASATAHQWEYFE--------YVYKGMALSGCQLDQT 573
DE +Y +++ +AS W+ + Y M CQ+ +T
Sbjct: 476 -------DEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
A D LLE+G +P + + ++ + EKA N M
Sbjct: 529 NQAI---------------DKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKM 573
Query: 634 AYAPF 638
F
Sbjct: 574 VEKNF 578
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 146/366 (39%), Gaps = 39/366 (10%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GRPH+A +IFN M + + P + ++ LL LV+ PS
Sbjct: 137 CGRPHQAAQIFNRM-KRLGMQPTLLTCNT---------LLNALVRF-------PSSHSIR 179
Query: 301 MHRKNWDPVLEPDLVV----YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+ + + ++ + + +N +++ +++ V ++R G P TY +
Sbjct: 180 LSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTIL 239
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ + + G+ + + M G T+ +LV G + EA + M Q VV
Sbjct: 240 DGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVV 299
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
A Y + C GR +AM + E++++L+ S P +T+ LI + G ++
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLS-PDVVTYNTLINGCFEHGSSEEGFK 358
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ + M+ +PN T N M+K + + K E+ + + SG P
Sbjct: 359 LIEEMEGRGMKPNSVTYNVMVKWFVKK---GKMDEVDKTVRKMEESGCL----------P 405
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
D TY++++ + + + M G ++D +L R K L+ A
Sbjct: 406 DIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERK---LDEAH 462
Query: 596 DSLLEA 601
D L A
Sbjct: 463 DLLCSA 468
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 16/215 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ K + +ALR+++ M E + P I Y+S+ L Q+G + + ++ +
Sbjct: 480 YGTLIIGYFKHEKASQALRLWDEMKEK-EIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL 538
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L PD + YN +++ Q + F ++ + KP
Sbjct: 539 LESG---------------LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVV 583
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T + + + G + + F G+ + A++Y ++ + +E + EA + M
Sbjct: 584 TCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEM 643
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
E++ + Y + L + GR +DA + KI
Sbjct: 644 EEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKI 678
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 306 WDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
WD + E P ++ YN+++ + +L +SGL P TY + Q
Sbjct: 500 WDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQ 559
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
G+ + +F KM + +T L+ +EG + +A+ +G A
Sbjct: 560 EGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVS 619
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
Y + LC R+ +A ++E+++ + P T+ ++ D G + D
Sbjct: 620 YNTIILSLCKEKRFGEAFDLLEEMEE-KKLGPDCYTYNAILGGLTDAGRMKD 670
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 31/242 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL G QA+ LD L + + Y ++ + G+ +A + N M+
Sbjct: 518 MIAGLCQMGKTNQAIDKLDE---LLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E N PD+ +++ L + G+L++ +KL K + D V
Sbjct: 575 EK-NFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGK---------------DVDAV 618
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++ + ++ F + +++ + L P TY + + +G+ EF K+
Sbjct: 619 SYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKI 678
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
A+ G++ F E GK +A + E A Y LC+ GR+
Sbjct: 679 AEKGKS---------ENQFLELGKRQDARTSEIPQEPH---PNAIAYSNKINELCSQGRY 726
Query: 436 QD 437
+D
Sbjct: 727 KD 728
>gi|298711678|emb|CBJ32729.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 832
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 118/288 (40%), Gaps = 18/288 (6%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
L G G W+QA+ +L + D + YT + G+AG+ +AL +F
Sbjct: 493 LTACGVGGRWQQALELLPRALAVADGKPSSCLRSYTAAIKACGRAGQWEDALALFRRGQR 552
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
D L PD Y V G E + L+ M L P +
Sbjct: 553 D-GLQPDEVCYAEVMSACAGGGCADETLGLLREMPAAAG--------------LRPTVPC 597
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM- 375
YNA + AC W+ + +++ GL P +T +A+ + + G+ + + +M
Sbjct: 598 YNAAIVACGAGGDWRRSVELLEEMPTVGLAPGVSTCNMAINALRRGGQCQRILDLLERMS 657
Query: 376 -AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
A A A +Y + A G+ EAV R ME+ GV Y L GR
Sbjct: 658 TAPGLPAPDATSYNTAITACESAGRFEEAVGLFRAMERIGVAPDVVGYTATIQALGRCGR 717
Query: 435 WQDAMLVVEKIKS-LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
W++A+ ++ +++S ++P T+ + ++ G + +S+F+ M
Sbjct: 718 WEEALALLGEVRSRATAAEPNVRTYVAAVHAAGHAGQWERAVSVFRLM 765
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 135/335 (40%), Gaps = 26/335 (7%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLR-KSGLKPSAATYGLAMEVMLQSGKY----DL 367
+++ +N V+ ACV + +W+ + ++ + G +P TYG+A+ +G++ +
Sbjct: 371 EVLPFNRVMQACVDAGRWQEAVALLDHMKDEVGAEPDLVTYGIAINAYGNAGEWRRALGV 430
Query: 368 VHEFFRKMAKSGEAI---GALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYY 423
+ E +M G A L + +RA G+ +EA+ + R++ GVV A V +
Sbjct: 431 LKESLPEMRTGGGASCENACLCFAYAIRACKHAGEFDEALGVLDRDVPATGVVPNALVLH 490
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI--TFTGLIISSMDGGHIDDCISIFQH- 480
E GRWQ A+ ++ + ++ KP ++T I + G +D +++F+
Sbjct: 491 EALTACGVGGRWQQALELLPRALAVADGKPSSCLRSYTAAIKACGRAGQWEDALALFRRG 550
Query: 481 MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
+D +P+ ++ + + L E A A L+P Y
Sbjct: 551 QRDGLQPDEVCYAEVMSACAGGGCADETLGLLREMPAA------------AGLRPTVPCY 598
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
++ + A W + + M G + + R G+C + + +
Sbjct: 599 NAAIVACGAGGDWRRSVELLEEMPTVGLAPGVSTCNMAINALRRGGQCQRILDLLERMST 658
Query: 601 AGEIPHP--LFFTEMLIQAIVQSNYEKAVALINAM 633
A +P P + + +E+AV L AM
Sbjct: 659 APGLPAPDATSYNTAITACESAGRFEEAVGLFRAM 693
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 198/488 (40%), Gaps = 54/488 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+ A + D + +KD D S Y+ L+ L GR EA+ + M+
Sbjct: 243 LIIGHCKNGNLDLAFEMFDRM--VKDGCDPNS-VTYSALINGLCSEGRLEEAMDMLEEMI 299
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR--------QKPSKRIKNMHRKNWD 307
D + P + AY V+L G E VKL+ +M+ Q + I + R
Sbjct: 300 -DKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKF 358
Query: 308 PV------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
V L P V Y+A++N +++ +F+ + P+ TY +
Sbjct: 359 EVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVI 418
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ G F +M K+G + +TY +++ ++++G +N A+ + M+ G+
Sbjct: 419 IKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL 478
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDC 474
Y L G+ + A + ++ + H P +T+ +I + +DD
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEM--VEHGISPNVVTYNAIINGYLTVAKVDDA 536
Query: 475 ISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAK----ELFEETTRANSSGYT-FLSG 528
+++F M + P+ GT N M+ +S+ + S+A+ ++ ++ N YT F+ G
Sbjct: 537 LALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 529 ------DGAPLK-----------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
K P+ TYSS+++ Q E E + GC+ +
Sbjct: 597 LCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD----DGCEPN 652
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
+ L+ G+C+ + +S+ + G P + +L+ E A+ + +
Sbjct: 653 VDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFD 712
Query: 632 AMAYAPFH 639
+M F
Sbjct: 713 SMVTTGFQ 720
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 147/367 (40%), Gaps = 72/367 (19%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P+L +NA++ + + + + G P TY + ++G DL
Sbjct: 198 IRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAF 257
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E F +M K G ++TY L+ EG++ EA+ + M +G+ T Y L
Sbjct: 258 EMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSL 317
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS-SMDG-------------------- 468
C+ GR +A+ ++ K+K R P T+T LI S DG
Sbjct: 318 CDAGRSCEAVKLLGKMKK-RGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPT 376
Query: 469 --------------GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
G + ++IF+ M H PN T N ++K + KA +F+
Sbjct: 377 AVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFD 436
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL-------- 565
+ +A S P+ TY+ ++ YF+ Y A+
Sbjct: 437 QMLKAGPS-------------PNVITYNIIIHI--------YFKQGYMNNAMRLLEMMKG 475
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+G +LD +A L+ SR GK LEHA F+ ++E G P+ + + ++ + +
Sbjct: 476 NGLKLDTWTYANLISGFSRGGK---LEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAK 532
Query: 623 YEKAVAL 629
+ A+AL
Sbjct: 533 VDDALAL 539
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 127/300 (42%), Gaps = 17/300 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V+ ++ SG++P+ T+ ++++ GK + G TY L+
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G ++ A M + G + Y L LC+ GR ++AM ++E++ + +P
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMID-KGIEPTV 307
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T I+S D G + + + MK C PN+ T A++ SR+ F A ++ +
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ DG L P TYS+++ ++E +++ M LS L T+
Sbjct: 368 -----------MLADG--LVPTAVTYSALINQLYVEGRFETALTIFEWM-LSHDSLPNTE 413
Query: 575 HAWLLVEA-SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++++ G FD +L+AG P+ + + ++ Q A+ L+ M
Sbjct: 414 TYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMM 473
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 106/280 (37%), Gaps = 53/280 (18%)
Query: 358 VMLQSGKYD---LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+++Q GK+D L + + +M SG T+ +++ +GK+ EA + ++ G
Sbjct: 173 LLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYG 232
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
AC P T+T LII G++D
Sbjct: 233 -----------AC-------------------------PDTFTYTSLIIGHCKNGNLDLA 256
Query: 475 ISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+F M KD C+PN T +A++ +A ++ EE +
Sbjct: 257 FEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKG-------------I 303
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
+P + Y+ + + A + + M GC + + L+ SR GK +
Sbjct: 304 EPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIG 363
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ +L G +P + ++ ++ Q V+ +E A+ + M
Sbjct: 364 VYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWM 403
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 129/345 (37%), Gaps = 65/345 (18%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
+G AM +L+ + G K D + Y L++ + G+ A +FN M+E + P
Sbjct: 460 QGYMNNAMRLLEMMKGNGLKLD---TWTYANLISGFSRGGKLEHAFSLFNEMVEH-GISP 515
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV---------- 309
++ Y+++ V + + + L +M + PS NM +
Sbjct: 516 NVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFC 575
Query: 310 -------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
L P+++ Y + ++ + + F +F +++K P+ TY ++ + Q
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQE 635
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV------- 415
G+ E ++ G TY LVR +G+ EA V +M+++G+
Sbjct: 636 GQ----AEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIY 691
Query: 416 ----VGTA------------------------SVYYELACCLCNNGRWQDAMLVVEKIKS 447
VG S Y L C LC Q A + + +
Sbjct: 692 RALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLK 751
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 491
+H E+ +T L+ + G D + + M+ +C N T
Sbjct: 752 -KHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQT 795
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 168/403 (41%), Gaps = 32/403 (7%)
Query: 214 DWVYGLKDKRDLKSR---FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
D V + R LK R YT L+ L +A RP AL + M ++ + + ++
Sbjct: 162 DAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-QEVGYEVGVHLFTTL 220
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
L + G + + + L++ ++ LEPD+V+YN ++ +
Sbjct: 221 VRALAREGQVADALALVDEVKGS---------------CLEPDIVLYNVCIDCFGKAGNV 265
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ F +L+ GLKP +Y + V+ ++G+ E F +M A Y +
Sbjct: 266 DMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 325
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ + G+ +A + + +RG + + + + CL + +A+ + E +K +
Sbjct: 326 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK--KD 383
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKA 508
++P T+ +I GG +++ I M +H PN+ TVN M+ + +A
Sbjct: 384 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEM-EHASLFPNLLTVNIMVDRLCKARKLEEA 442
Query: 509 KELFEETTR--ANSSGYTFLS---GDGAPLKPDEY--TYSSMLEASATAHQWEYFEYVYK 561
++FE ++ N T+ S G G + DE + ML+A A+ Y + +
Sbjct: 443 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI-R 501
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ G + D K L+ LL D + +AGE+
Sbjct: 502 NFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEV 544
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 94/479 (19%), Positives = 188/479 (39%), Gaps = 83/479 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + A +L+ L+++ + S + +L LGK + EAL +F +M
Sbjct: 325 MIMGYGSAGRFEDAYKLLER---LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 381
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P+ + Y+ + L G ++E ++++ M L P+L+
Sbjct: 382 KDAE--PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS---------------LFPNLL 424
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ + + + + +F+ + G P TY ++ + + G+ D + F KM
Sbjct: 425 TVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 484
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G + Y L+R F+ G+ + + + +RG ++ C+ G
Sbjct: 485 LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEV 544
Query: 436 QDAMLVVEKIKS---LRHSKPLEITFTGL-----------IISSM--------------- 466
+ ++ E I+S L + I GL I +M
Sbjct: 545 EKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAV 604
Query: 467 -DG----GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
DG G + I + MK+ C +P + T A++ ++ D +A LFEE A S
Sbjct: 605 VDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE---AKS 661
Query: 521 SGY--------TFLSGDG-----------------APLKPDEYTYSSMLEASATAHQWEY 555
G + + G G L P+ YT++S+L+A A +
Sbjct: 662 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 721
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ M C + ++ L+ R K + + + + G +P+ + +T M+
Sbjct: 722 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 780
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/472 (19%), Positives = 184/472 (38%), Gaps = 70/472 (14%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
+ ++VDRL + + +K +Q G L+ GLG KG +A + +
Sbjct: 426 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE--- 482
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN------------------------- 252
+ D + VYT L+ GR + +IF
Sbjct: 483 KMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAG 542
Query: 253 ------LMLEDCNLY---PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
++ ED Y PD+ +Y + L + G +E + M+Q+
Sbjct: 543 EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG--------- 593
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
D YNAV++ S + + + +++++ ++P+ ATYG ++ + +
Sbjct: 594 ------FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 647
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
+ D + F + G + + Y L+ F + G+I+EA + M ++G+ +
Sbjct: 648 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 707
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 482
L L +A++ + +K ++ P T++ LI + +Q M K
Sbjct: 708 SLLDALVKAEEINEALVCFQSMKEMK-CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK 766
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
PN+ T M+ ++ + A LFE F + G PD ++++
Sbjct: 767 QGLVPNVVTYTTMISGLAKVGNITDAYSLFER----------FKANGGI---PDAASFNA 813
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
++E + A++ V++ L GC+++ K L++A +C LE A
Sbjct: 814 LIEGMSNANRAMEAYQVFEETRLRGCRIN-IKSCISLLDALNKSEC--LEQA 862
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 99/245 (40%), Gaps = 15/245 (6%)
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L A ++++AV AV M + S Y L L R + A+ ++ +++ +
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKA 508
+ + + FT L+ + G + D +++ +K C EP+I N + + + A
Sbjct: 210 YEVGVHL-FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 268
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+ F E L G LKPD+ +Y+SM+ A + E ++ M
Sbjct: 269 WKFFHE-----------LKAQG--LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 315
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
+ +++ AG+ + L E G IP + F +L + ++A++
Sbjct: 316 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 375
Query: 629 LINAM 633
L M
Sbjct: 376 LFEVM 380
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/537 (19%), Positives = 217/537 (40%), Gaps = 100/537 (18%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E + +++A +L +L R ++ + ++ G+++ E ++ GL G
Sbjct: 12 EAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
QA+ ++ + G+ + F+Y ++ L +A R +A ++ M+E+ ++ P++ Y
Sbjct: 72 QALELVRELSGVYTP----TVFIYNGIITGLCRASRVMDAYKVLEKMVEE-SIVPNVFTY 126
Query: 268 HSVAVTL---GQVGLLKELVKLIERMRQKPS-----KRIKNMHRKN-WDPVLE------- 311
+ L + L +E+ + ++R KP+ I+++ R D L
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRS 186
Query: 312 ----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
D++ ++ + + +++R+ G++P+ TY + Q G+ D
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDR 246
Query: 368 VHEFF------------------------------------RKMAKSGEAIGALTYKVLV 391
V FF ++ +SG +TY +L+
Sbjct: 247 VIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLI 306
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
F G+ + ++ + +M + GV Y L LC ++QDA ++E +++ S
Sbjct: 307 NTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAA-GS 365
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
P +T+ ++ G +D+ +++ M K C P++ T + ++ S+ M A +
Sbjct: 366 PPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVK 425
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM------- 563
LF E +++ G PD YS ++ + A + E +Y GM
Sbjct: 426 LF-ELIKSSREG------------PDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGD 472
Query: 564 ----ALSG-----CQLDQTKHAWLLVEASR--------AGKCHLLEHAFDSLLEAGE 603
AL+G C +T A +VE +R +G L + D LLE+ E
Sbjct: 473 NICRALAGLVAALCDAKRTDSARRIVEVARERGHRVTKSGDTDLAKIVEDHLLESKE 529
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/469 (18%), Positives = 182/469 (38%), Gaps = 91/469 (19%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L L + + E +R+F L+ +Y + Y V L G+ + ++L+
Sbjct: 22 FTLLATKLFRRSKFSEVVRLFTLLASRGVVYGE-TTYKLVVDGLCGAGMANQALELV--- 77
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ V P + +YN ++ + + + V +++ + + P+
Sbjct: 78 -------------RELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVF 124
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + + +S K L E F++M ++G +TY L++ G+I+EA+ + +
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM--I 182
Query: 411 EQRGVVGTASVYYELACC-----LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
EQR + V + C LC R DA+ +E+++ + +P E+T++ L+
Sbjct: 183 EQRSLELPTDV---ITCTTIVGGLCKASRLDDALKFMEEMRQM-GVRPNEVTYSNLVHGF 238
Query: 466 MDGGHIDDCISIFQHMKDH-----------------CE--------------------PN 488
G +D I F+ K C+ P+
Sbjct: 239 RQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPD 298
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYT-------------------- 524
+ T + ++ ++R F + EL E+ R + Y+
Sbjct: 299 VVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLE 358
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
+ G+P P+ TY+S+++ + + + VY+ M S C D ++ ++ S+
Sbjct: 359 LMEAAGSP--PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSK 416
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
AG F+ + + E P ++ ++ E+A + + M
Sbjct: 417 AGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGM 465
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R + ++G + + + +L + K +E V + RGVV + Y + LC
Sbjct: 8 RSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
G A+ +V ++ + P + G+I + D + + M ++ PN+ T
Sbjct: 68 GMANQALELVRELSGV--YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFT 125
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+L R++ A+E+F+E R KP+ TY ++++
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGC-------------KPNPITYGTLIQ 166
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 180/474 (37%), Gaps = 50/474 (10%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++ IM Q G E L+ GL + G +A+ + + + + YT L
Sbjct: 249 YEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFA---DMTEDNCCPTVRTYTVL 305
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L +GR EAL +FN M E P++ Y + L + + E K++ M +K
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
L P +V YNA+++ F + + + P+ TY
Sbjct: 365 ---------------LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + + K KM + + +TY L+ + + A + M + G
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+V Y LC GR ++A + + +K+ + K E+ +T LI G ID
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA-KGVKANEVIYTALIDGYCKVGKIDVA 528
Query: 475 ISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSG- 528
S+ + M D C PN T N +++ + +A L + + YT L G
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGE 588
Query: 529 ---DGA--------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
DGA +PD TY++ L A + E + V M G D
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFD---SLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ L+ +R G H AFD +++ G P L+ +LI+ + N
Sbjct: 649 LVTYTVLIDGYARLGLTH---RAFDFLKCMVDTGCKPS-LYIVSILIKNLSHEN 698
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 115/268 (42%), Gaps = 37/268 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + ++A S++ + + K + YT L+ + K G AL++FN M+
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVK---PTVVTYTILIGEMLKDGAFDHALKVFNHMV 606
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
PD+ Y + G+L+E+ +I +M N + +L PDLV
Sbjct: 607 -SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM--------------NEEGIL-PDLV 650
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL------------------AME 357
Y +++ F K + +G KPS + ++
Sbjct: 651 TYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGID 710
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+ + +Y++ + F KM + G I Y L+ F ++ ++ EA V +M++RG+
Sbjct: 711 SVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 770
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKI 445
+ +Y L C C G + +A+ +V+ +
Sbjct: 771 SEDIYNSLLDCCCKLGVYAEAVRLVDAM 798
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 141/363 (38%), Gaps = 24/363 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD Y +++ + + VF + + G + + +Y + + ++G+ +
Sbjct: 225 LHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEAL 284
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ F M + TY VL+ A G+ EA+ M+++G Y L L
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
C + +A ++ ++ S + P +T+ LI G IDD I M+ + C PN
Sbjct: 345 CKENKMDEARKMLSEM-SEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403
Query: 489 IGTVNAML-------KVYSRNDMFSKAKE------------LFEETTRANS--SGYTFLS 527
T N ++ KV+ + +K E L + N S Y LS
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463
Query: 528 -GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+ L PD++TYS ++ + E ++ + G + ++ + L+ + G
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
K + + +L +P+ + ++ + ++A +L+ M T +T
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583
Query: 647 ELF 649
L
Sbjct: 584 ILI 586
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 165/425 (38%), Gaps = 47/425 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+P L YN +L + + V+ +L + + P+ T+ + + G
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ K+ ++G TY L+ ++ A M Q+G Y L L
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C GR +A+ + + + P T+T LI + G + +++F MK+ CEPN
Sbjct: 275 CEAGRINEALKLFADMTE-DNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEE-----------TTRANSSGYT--FLSGDGAPL-- 533
+ T ++ + + +A+++ E T A GY + D +
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393
Query: 534 -------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA- 585
P+ TY+ ++ + V+K MAL L++ L+ S
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRK------VHKAMALLNKMLERKLSPSLITYNSLIH 447
Query: 586 GKCHL--LEHAFD--SLL-EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 640
G+C + LE A+ SL+ E G +P ++ + + E+A L +++
Sbjct: 448 GQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKA 507
Query: 641 TERQWTELFES----NEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKE 696
E +T L + + ++ LE++LN C N+ + + + LC+ +K
Sbjct: 508 NEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI-------EGLCKEKKM 560
Query: 697 RDLSS 701
++ SS
Sbjct: 561 KEASS 565
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 136/347 (39%), Gaps = 24/347 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+E + +NA++ AC +F+++ K G+ P T+ + +G +D
Sbjct: 248 IERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQ 307
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F M G +IG Y + A K EA + M ++G Y L C
Sbjct: 308 SFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNALLCAY 367
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
+W+DAM I+ + P ++++ LI + + G + + + + MK C+PN
Sbjct: 368 ERTAQWEDAMRTFIWIQD-KGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPN 426
Query: 489 IGTVNAMLKVYSRNDMFSKAKELF----------------------EETTRANSSGYTFL 526
+ + +LK Y + + KA+E+F E+ + YT
Sbjct: 427 VVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIE 486
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+ +K D +S+ + A A A QWE E +K M SGC + ++ L+ G
Sbjct: 487 KLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVG 546
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
E F +L G P+P +L EK + +M
Sbjct: 547 LWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESM 593
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 133/309 (43%), Gaps = 32/309 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL + + +A+R F + ++D L PD+ ++ S+ G + ++++ERM
Sbjct: 360 YNALLCAYERTAQWEDAMRTF-IWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERM 418
Query: 291 RQKPSKR--------IKNMHRK-NWDPVLE-----------PDLVVYNAVLNACVPSHQW 330
+ + +K + NW+ E P+ V + ++L+A QW
Sbjct: 419 KTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQW 478
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
K V + ++L + G+K + + + ++G+++L E F++M KSG +TY L
Sbjct: 479 KKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSL 538
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC--LCNNGRWQD---AMLVVEKI 445
++A+ + G +A + + M + G+ ACC L G+ ++ ++ E +
Sbjct: 539 IKAYGDVGLWEKAESVFKLMLRVGIRPNPQ-----ACCALLRAYGKGKELEKVIIFFESM 593
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM 504
+ +P + + + + G + M+ C P+ ++ +Y N
Sbjct: 594 EPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQ 653
Query: 505 FSKAKELFE 513
KA ++ E
Sbjct: 654 IDKAMQVLE 662
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 148/395 (37%), Gaps = 46/395 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L D+ N V+ W VF+ R +G++P+A + + +
Sbjct: 178 LRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQAL 237
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ FR M K+G T+ L+ A + AV ME+ G+V + L
Sbjct: 238 KLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSAT 297
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPN 488
G W A ++ +++ S L + + + + +FQ M + E
Sbjct: 298 TAAGLWDRAQSFIDMMQARGFSIGLH-EYIEMQWACARARKPREAYGLFQVMLEQGYELK 356
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + NA+L Y R + A TF+ L PD ++SS++ A A
Sbjct: 357 LESYNALLCAYERTAQWEDAMR-------------TFIWIQDKGLTPDVMSWSSLISACA 403
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A Q E V + M S CQ + LL + G E F ++L++G P+ +
Sbjct: 404 NAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEV 463
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
+ +L S YEK RQW ++ + E KLE+L L
Sbjct: 464 AWCSLL------SAYEKG----------------RQWKKVLYTIE------KLEELGMKL 495
Query: 669 CNCNAASSEITVSNLSRALHALCRSEKERDLSSSA 703
+ + T+S L++A EK + ++ S
Sbjct: 496 ---DVVAWSTTISALAKAGQWELAEEKFKQMTKSG 527
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 116/325 (35%), Gaps = 68/325 (20%)
Query: 186 LMFTEGQMLKL------LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+M +G LKL L W AM W+ +DK ++ L++
Sbjct: 347 VMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWI---QDKGLTPDVMSWSSLISACA 403
Query: 240 KAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK--PSK 296
AG+ AL + M DC P++ ++ + + G ++ ++ M P
Sbjct: 404 NAGQAERALEVLERMKTSDCQ--PNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPN 461
Query: 297 RIK-----NMHRKN--WDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ + + K W VL + D+V ++ ++A + QW+ FK
Sbjct: 462 EVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFK 521
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG-----EAIGAL-------- 385
Q+ KSG P+ TY ++ G ++ F+ M + G +A AL
Sbjct: 522 QMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGK 581
Query: 386 -----------------------TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
Y + A W G+ AV + ME G + +Y
Sbjct: 582 ELEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIY 641
Query: 423 YELACCLCNNGRWQDAMLVVEKIKS 447
L NG+ AM V+E++ S
Sbjct: 642 TTLINMYEANGQIDKAMQVLERMGS 666
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 91/223 (40%), Gaps = 26/223 (11%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M SG E LL W++ + ++ + L K D+ ++ ++ L K
Sbjct: 453 MLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDV---VAWSTTISALAK 509
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKPSKR 297
AG+ A F M + L P+I Y S+ G VGL ++ + KL+ R+ +P+ +
Sbjct: 510 AGQWELAEEKFKQMTKSGCL-PNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQ 568
Query: 298 I-----------KNMHR-----KNWDPV--LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
K + + ++ +P +EPD Y A+ AC +W+ +
Sbjct: 569 ACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDR 628
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+ +G P + Y + + +G+ D + +M SG I
Sbjct: 629 MEMAGCTPDSVIYTTLINMYEANGQIDKAMQVLERMG-SGSLI 670
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 155/384 (40%), Gaps = 38/384 (9%)
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
P+ F++ QL +GL P A + + M +++ G+ F +M G +
Sbjct: 219 PTAPEACAFYL--QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVV 276
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
++ ++ G ++ A R M + GV Y L LC GR +DA V EK+
Sbjct: 277 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 336
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 504
R KP + FT LI + G + + + + M++ P+ T NA++ R
Sbjct: 337 CG-RGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARD 395
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
A + E A L+PD TY+++++ + + + + M
Sbjct: 396 LKSASGIVVEMRSAG-------------LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV 442
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV-QSNY 623
G LD+ + L+ S+AG+ E ++EAG P +T M+I A + +
Sbjct: 443 AEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYT-MVIDAFCRKGDV 501
Query: 624 EKAVALINAM-------AYAPFHITERQWTELFE-SNEDRISRDKLEKLLNALCNCNAAS 675
+ + L+ M +++ + +L + N D LLNA+ N +
Sbjct: 502 KTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNAD--------MLLNAMINIGVSP 553
Query: 676 SEITVSNLSRALHALCRSEKERDL 699
+IT + L L C+ K D+
Sbjct: 554 DDITYNIL---LDGHCKHGKVTDI 574
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 144/337 (42%), Gaps = 26/337 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L G A +V D + +R + S + +++ + +AG A + M
Sbjct: 246 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVS---FNTMISGMCRAGDLDGAETLHRRMS 302
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKP-----------------S 295
E + PD+ Y ++ L +VG +++ + E+M KP +
Sbjct: 303 E-AGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 361
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + +HR+ + + PD V YNA++N + K + ++R +GL+P TY
Sbjct: 362 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 421
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + + D+ E + M G + +TY L+ + G+ +A + M + G+
Sbjct: 422 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGL 481
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ Y + C G + + +++++++ + KP +T+ ++ G + +
Sbjct: 482 EPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQN-KGRKPGVVTYNVIMNGFCKLGQMKNAD 540
Query: 476 SIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
+ M + P+ T N +L + ++ + +EL
Sbjct: 541 MLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 577
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 140/347 (40%), Gaps = 25/347 (7%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD V + +++ ++ + +++ G +P TYG + + + G+ DL
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
KM K + Y ++ + +++A ME +G+ Y L CLC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPN 488
N GRW DA ++ + ++ P + F LI + + G + + ++ M HC P+
Sbjct: 297 NYGRWSDASRLLSDMLE-KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYTFL--------SGDGAPL--- 533
+ N ++K + + + E+F E ++ N+ YT L D A +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 534 -------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
PD TY+ +L+ E V++ M +LD + ++ +AG
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
K F SL G P+ + +T M+ + E+A AL M
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 130/295 (44%), Gaps = 17/295 (5%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L++ L GR +A R+ + MLE N+ PD+ ++++ + G L E KL +
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEK-NINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K+ H PD+V YN ++ + + VF+++ + GL +
Sbjct: 345 EM-------VKSKH-------CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + Q+ D F++M G +TY +L+ G + A+
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M++R + Y + LC G+ +D + + SL+ KP +T+T ++
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRK 509
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
G ++ ++F MK D PN GT N +++ R+ + + EL +E +G
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 165/428 (38%), Gaps = 39/428 (9%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL R EA+ + + M+E PD + ++ L Q E V L+ERM K
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 294 PSK-------RIKNMHRKNWDPVL-------------EPDLVVYNAVLNACVPSHQWKGV 333
+ + N K +P L E D+V+YN +++
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F +F ++ G+KP TY + + G++ M + + + L+ A
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 394 FWEEGKINEAVAAVRNM-EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
F +EGK+ EA M + + Y L C R ++ M V ++ S R
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM-SQRGLV 388
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
+T+T LI D+ +F+ M D P+I T N +L N A +
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
FE + + +K D TY++M+EA A + E ++ ++L G + +
Sbjct: 449 FEYMQKRD-------------MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA-LI 630
+ ++ R G + F + E G +P+ + LI+A ++ E A A LI
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT-LIRARLRDGDEAASAELI 554
Query: 631 NAMAYAPF 638
M F
Sbjct: 555 KEMRSCGF 562
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 105/250 (42%), Gaps = 23/250 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L + G W A +L + DL + L+ K G+ EA ++++ M+
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDL---VFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK--------------------PS 295
+ + +PD+ AY+++ + ++E +++ M Q+
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + ++ + PD++ YN +L+ + + VF+ ++K +K TY
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+E + ++GK + + F ++ G +TY ++ F +G EA A M++ G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 416 VGTASVYYEL 425
+ + Y L
Sbjct: 528 LPNSGTYNTL 537
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/404 (17%), Positives = 143/404 (35%), Gaps = 28/404 (6%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+L Y+ +N Q + ++ K G PS T + +
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M + G +T+ LV ++ K +EAVA V M +G Y + LC
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
G A+ ++ K++ + + I + +I H+DD +F M+ +P++ T
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVI-YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRAN-SSGYTFLSG-------DGAPLK--------- 534
N ++ +S A L + N + F + +G ++
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 535 ------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
PD Y+++++ + E V++ M+ G + + L+ +A C
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
+ F ++ G P + + +L N E A+ + M + +T +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 649 FESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
E+ K+E + C+ + + V + + CR
Sbjct: 468 IEA---LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F + KS PS + + + + K+DLV +M G + TY + + F
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+++ A+A + M + G + L C+ R +A+ +V+++ + + +P
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY-QPDT 180
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
+TFT L+ + +++ + M C+P++ T A++
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 137/332 (41%), Gaps = 23/332 (6%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D + P++ YNA+++ + ++ +FK++ GL+P+ TY + + + + G +
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F KM G + Y L+ + ++G ++ A + M + G+ TA+ Y L
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
LC NG M + ++ R TFT LI +D+ +F M D +
Sbjct: 451 AGLCRNGDLSSCMELHREMAE-RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PN T N M++ Y KA +L+++ LKPD YTY S++
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG-------------LKPDNYTYRSLIS 556
Query: 546 A----SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
S + E+ + A+ L+ LL R G+ H +D +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAV----LNNFSLTALLYGFFREGRFTETYHLWDEMAVR 612
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G + FT ++ A+ Q + EK+ L M
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 98/501 (19%), Positives = 187/501 (37%), Gaps = 42/501 (8%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
A L+D+L + E + + M GL E L+ L +G A+ + D
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD-- 397
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
++DK + + Y L+ K G A + + M+++ L P A+Y + L +
Sbjct: 398 -KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE-GLTPTAASYSPLIAGLCR 455
Query: 277 VGLLKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVV 316
G L ++L M + K + K D + P+ V
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+N ++ + F ++ Q+ + GLKP TY + + + +EF +
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRW 435
S + + L+ F+ EG+ E M RGV + S + L + +
Sbjct: 576 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
+ +L E + + KP +I +T +I + ++ ++ + M D PN T
Sbjct: 636 KSCVLFREMKE--QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 693
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ ++ A+ L +E N + P+++TY+ L+ AT E
Sbjct: 694 LINNLCKSGYLGSAELLCKEMLAGN-------------VLPNKFTYNCFLDYFATEGDME 740
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ ++ M L G L+ +AGK + E+G P + ++ ++
Sbjct: 741 KAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799
Query: 615 IQAIVQSNYEKAVALINAMAY 635
+ + KA L N M Y
Sbjct: 800 HELCKMGDINKAFELWNEMLY 820
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 148/402 (36%), Gaps = 53/402 (13%)
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S +T+ Q + L L+ ++RQ R ++ K + D VY A + A S
Sbjct: 156 SSGITVNQYTASQILFSLV-KIRQFALAR--DLFDKMLQSGVHLDEYVYTAGIRAYCESR 212
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
G + ++ G+K SA Y + M + ++ + E M G +TY+
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY----------------YELAC----- 427
LV F ++ A+ +M + G V + + + LAC
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332
Query: 428 --------------CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
LC N R+ DA + +++ R +P E+T+ LI + G I+D
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAG-RGLEPNEVTYAILIHALCKRGMIED 391
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ +F M+D + + N+++ Y + +A+ L +
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG------------- 438
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
L P +YS ++ +++ MA G + L+ + K
Sbjct: 439 LTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAA 498
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
FD ++++ IP+ + F M+ + N KA L + M
Sbjct: 499 RLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/373 (18%), Positives = 137/373 (36%), Gaps = 50/373 (13%)
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
SG+ + T + +++ ++ L + F KM +SG + Y +RA+ E ++
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A V ME GV +A Y L LC N R Q+A+ V + ++ + E+T+ L+
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTAD-EVTYRTLV 275
Query: 463 ISSMDGGHIDDCISIFQHM--------KDHCE---------------------------- 486
++ + I M + +C
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ NA++ +N+ F A LF+E ++G G L+P+E TY+ ++ A
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKE-----------MAGRG--LEPNEVTYAILIHA 382
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
E ++ M G ++ + L+ + G +++ G P
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLN 666
++ ++ + + L MA +T L D+ +L +
Sbjct: 443 AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502
Query: 667 ALCNCNAASSEIT 679
+ + N +E+T
Sbjct: 503 KMIDSNVIPNEVT 515
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/549 (16%), Positives = 221/549 (40%), Gaps = 43/549 (7%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
V+ DV G + + W ++R + + L+ L E + WK ++ M ++
Sbjct: 63 VMKTDV--GVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNP 120
Query: 186 L-MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+ + T ++ +++ LG+ RQA+++ Y +K ++ Y ++ +L G+
Sbjct: 121 ICVVTPTELSDVVRMLGNAKMVRQAITIF---YQIKTRKCQPIAQAYNSMIIMLMHEGQY 177
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM 301
+ +++N M + + +PD Y ++ ++G ++L+ M++ +P+ +I M
Sbjct: 178 EKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTM 237
Query: 302 -----------------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+ PD+ Y ++ + + + F ++++ G
Sbjct: 238 LIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREG 297
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEA 403
+P + + ++G+ D + F++M +TY +++A +E + + +E
Sbjct: 298 CRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEV 357
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ M++ G+ ++ Y L C R + AM+++E++ + P + LI
Sbjct: 358 PSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE-KGFPPCPAAYCSLID 416
Query: 464 SSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSG 522
+ D +FQ +K++C + V A M+K + A +F+E + +
Sbjct: 417 ALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCA- 475
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
PD Y Y++++ A + + M GC D + +L
Sbjct: 476 ------------PDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGL 523
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE 642
++ G H ++ ++ P + + +L +E+A L+ M F
Sbjct: 524 AKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDL 583
Query: 643 RQWTELFES 651
++ + E+
Sbjct: 584 ITYSSILEA 592
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 29/232 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 378 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ---EL 434
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ LGKAGR +A+ +F+ M PD+ AY+++ L + G+
Sbjct: 435 KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM-NKLGCAPDVYAYNALMSGLARTGM 493
Query: 280 LKELVKLIERMRQ-------KPSKRIKNMHRKNWDP-------------VLEPDLVVYNA 319
L E + + RM++ I N K P + PD+V YN
Sbjct: 494 LDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNT 553
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
VL A + ++ + K++ G + TY +E + GK D HE+
Sbjct: 554 VLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI---GKVD--HEY 600
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 150/362 (41%), Gaps = 35/362 (9%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L P + ++++ L + + VKL + M +K H EPD++ Y+
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEM-------VKMGH--------EPDVITYST 50
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++N + K++ + G KP+ Y ++ + + +FF +M K G
Sbjct: 51 IINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG 110
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
TY ++ F G++NEA + + M +R V+ + L LC +A
Sbjct: 111 IPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAW 170
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 498
LV E + + +P T+ L+ +D+ +F M + C PN+ + N ++
Sbjct: 171 LVFETMTE-KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILING 229
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ ++ +AK L E + + L PD +TYS+++ + + +
Sbjct: 230 HCKSGRIDEAKGLLAEMSHKS-------------LTPDIFTYSTLMRGFCQVGRPQEAQE 276
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL--LEAGEIPHPLFFTEMLIQ 616
+ K M G + ++ +L + G L+ AF+ L ++ +I +F +LI+
Sbjct: 277 LLKEMCSYGLLPNLITYSIVLDGLCKHGH---LDEAFELLKAMQESKIEPNIFIYTILIE 333
Query: 617 AI 618
+
Sbjct: 334 GM 335
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 158/388 (40%), Gaps = 31/388 (7%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKG 204
EK + A ++D L + + + F M + G+ +FT +L G + G
Sbjct: 73 EKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS---ILHGFCNLG 129
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
+A S+ + ++ + ++ +T L+ L K EA +F M E L PD+
Sbjct: 130 RVNEATSLFKQ---MVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK-GLEPDV 185
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y+++ + E KL M +K P++ YN ++N
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCA---------------PNVRSYNILINGH 230
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
S + + ++ L P TY M Q G+ E ++M G
Sbjct: 231 CKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNL 290
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+TY +++ + G ++EA ++ M++ + +Y L +C G+ + A +
Sbjct: 291 ITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSN 350
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRND 503
+ ++ +P +T+T +I + GG ++ +F+ M + C PN T N +++ + RN
Sbjct: 351 L-FVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNG 409
Query: 504 MFSKAKELFEETT----RANSSGYTFLS 527
A L EE A+SS + LS
Sbjct: 410 DTPNAVRLIEEMVGKGFSADSSTFRMLS 437
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 17/248 (6%)
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
K GL+P+ T+ + + K + F +M K G +TY ++ + G
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTG 460
A+ ++ ME++G Y + LC + +AM E +K P T++
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVK--EGIPPDVFTYSS 120
Query: 461 LIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
++ + G +++ S+F+ M + + PN T ++ + M S+A +FE T
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
L+PD YTY+++++ + Q + + ++ M GC + + L+
Sbjct: 181 -------------LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILI 227
Query: 580 VEASRAGK 587
++G+
Sbjct: 228 NGHCKSGR 235
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 174/419 (41%), Gaps = 46/419 (10%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
GL + L+ LG G +A L + L + ++R Y LL K G
Sbjct: 263 GLTPRSNAVTALISALGIAGRVPEA-EALFLEFFLAGEIKPRTR-AYNALLKGYVKIGSL 320
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-------LLKEL------------VK 285
A + + M E C + PD A Y + + G LLKE+ +
Sbjct: 321 KNAEHVLDEMSE-CGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSR 379
Query: 286 LIERMR-----QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++ R QK ++ MH ++PD YN +++ + VF ++
Sbjct: 380 ILAGFRDRGDWQKAFAVLREMHASG----VQPDRHFYNVMIDTFGKYNCLGHAMDVFNRM 435
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R G++P T+ ++ + G++D E F++M +S G TY +++ E+ +
Sbjct: 436 RGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERW 495
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+ M+++G+V Y L +GR+++A+ +E +K+ KP +
Sbjct: 496 VGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKA-DGLKPSPTMYHA 554
Query: 461 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L+ + G D +++ + M+ D E + +N+++ + + +A + +
Sbjct: 555 LVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQ------ 608
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
F+ + +PD TY+++++A Q++ +Y+ M SGC D+ A L
Sbjct: 609 -----FMKEND--FRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAML 660
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 145/339 (42%), Gaps = 29/339 (8%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAIL 238
M++ G+ E L+ G W A +L + G+K S +V++++LA
Sbjct: 330 MSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK-----PSSYVFSRILAGF 384
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G +A + M + PD Y+ + T G+ L + + RMR +
Sbjct: 385 RDRGDWQKAFAVLREM-HASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEG---- 439
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
+EPD+V +N +++A + +FK++R+S P TY + + +
Sbjct: 440 -----------IEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINL 488
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ + ++ V +M + G +TY LV + G+ EA+ + M+ G+ +
Sbjct: 489 LGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPS 548
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKS--LRHSKPLEITFTGLIISSMDGGHIDDCIS 476
++Y+ L G A+ VV+ +++ L S + LI + + + + S
Sbjct: 549 PTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST---VVLNSLINAFGEDRRVVEAFS 605
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+ Q MK++ P++ T ++K R + F K ++EE
Sbjct: 606 VLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEE 644
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 148/389 (38%), Gaps = 52/389 (13%)
Query: 211 SVLDWVYG-LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
++L+ + G L+D R +++ L++ +A P AL + + L P A +
Sbjct: 215 AILERLLGDLRDSRLEPDAPLFSDLISAFARAALPDAALELLA-SAQAIGLTPRSNAVTA 273
Query: 270 VAVTLGQVGLLKE----LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+ LG G + E ++ KP R YNA+L V
Sbjct: 274 LISALGIAGRVPEAEALFLEFFLAGEIKPRTR------------------AYNALLKGYV 315
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
K V ++ + G+ P ATY L ++ ++G+++ ++M G +
Sbjct: 316 KIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSY 375
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+ ++ F + G +A A +R M GV Y + AM V ++
Sbjct: 376 VFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRM 435
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRND- 503
+ +P +T+ LI + GG D + +F+ M++ +C P T N M+ + +
Sbjct: 436 RG-EGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQER 494
Query: 504 ------MFSKAKE------LFEETTRANSSGYT-----------FLSGDGAPLKPDEYTY 540
M S+ KE + TT + G + + DG LKP Y
Sbjct: 495 WVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADG--LKPSPTMY 552
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+++ A A ++ V K M G +
Sbjct: 553 HALVNAYAQRGLADHALNVVKAMRADGLE 581
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 74/391 (18%), Positives = 158/391 (40%), Gaps = 33/391 (8%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI-KNMHRKN 305
ALR+ L+ E N PD+A+Y + +L R P I + +
Sbjct: 179 ALRLLALIREH-NFLPDLASYSHLLASLLNT-------------RDPPDAAILERLLGDL 224
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
D LEPD +++ +++A + + + GL P + + + +G+
Sbjct: 225 RDSRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRV 284
Query: 366 DLVHEFFRKMAKSGEAIGALT--YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
F + +GE I T Y L++ + + G + A + M + GV + Y
Sbjct: 285 PEAEALFLEFFLAGE-IKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYS 343
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 482
L GRW+ A ++++++++ KP F+ ++ D G ++ + M
Sbjct: 344 LLVDAYTRAGRWESARILLKEMEA-DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHA 402
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
+P+ N M+ + + + A ++F + G+G ++PD T+++
Sbjct: 403 SGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNR-----------MRGEG--IEPDVVTWNT 449
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
+++A + + ++K M S C T + ++ + +E + E G
Sbjct: 450 LIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQG 509
Query: 603 EIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+P+ + +T ++ Y++A+ I AM
Sbjct: 510 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAM 540
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 147/357 (41%), Gaps = 59/357 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R A+ +L+++ D+ + +L L K R +A +F L
Sbjct: 479 LVTGLSKSGMVRDALGLLEFMIESGLSPDV---ITFNSVLDGLCKEQRILDAHNVFKRAL 535
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E P++ Y ++ L ++ + E ++L+ +M + + + V
Sbjct: 536 ER-GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR---------------ANTV 579
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----------------GLAMEV 358
Y+ V++ + + + V +Q+R +G P A TY GL E+
Sbjct: 580 TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639
Query: 359 ------------------MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ +SG++D E MA G A A+TY +V + G++
Sbjct: 640 LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 699
Query: 401 NEAVAAVRNMEQRGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSK-PLEITF 458
EA+ M + VV + Y L LC GR +A +E++ +R + P +TF
Sbjct: 700 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM--IRAGRIPDVVTF 757
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+ LI D G ID + +F M + C+ +I NAM+ Y FS A L EE
Sbjct: 758 SILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEE 814
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 161/427 (37%), Gaps = 87/427 (20%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S YT L L ++GR EA+ I + M P+ Y S+ L + G + E +
Sbjct: 647 SVVTYTTLCHGLCRSGRFDEAVEILDYMAAR-GCAPNAITYSSIVDGLCKAGRVTEALGY 705
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E+M + D V+ P ++ Y+A+++ + + + +++ ++G
Sbjct: 706 FEKMAR--------------DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI 751
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P T+ + + + +G+ D E F MA+ G Y ++ A+ +G+ + A A
Sbjct: 752 PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYAL 811
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL----EITFTGLI 462
+ M+ G+ + + LC N R +A+ S HS P EI++ LI
Sbjct: 812 LEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAV-------SYFHSIPEDCRDEISYNTLI 864
Query: 463 ISSM-----------------DGGHIDDC------------------ISIFQHMKDHC-E 486
S + DGG D C + Q M+
Sbjct: 865 TSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHS 924
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ T M+ S+ A + FEE R N LKPD YSS+++A
Sbjct: 925 PDLRTYTIMISGLSKAKQLPLACDYFEEMLRKN-------------LKPDAIVYSSLIDA 971
Query: 547 SATAHQ----WEYFE--------YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
A + W+ +Y M S C+ T A ++ ++ C H
Sbjct: 972 FCKADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHI 1031
Query: 595 FDSLLEA 601
+ SL A
Sbjct: 1032 WTSLATA 1038
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/416 (19%), Positives = 173/416 (41%), Gaps = 30/416 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
++ L+ L AGR ++A ++ M+ + P+ Y + L + G + L + E+M
Sbjct: 384 FSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQM 443
Query: 291 RQKPSKRIKN--MHRKNWD----PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
++ + + +H D V P LV YN ++ S + + + + +SG
Sbjct: 444 LEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESG 503
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
L P T+ ++ + + + H F++ + G +TY L+ + K++EA+
Sbjct: 504 LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL 563
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ M + G Y + L GR +DA++V+ +++ P +T+ LI
Sbjct: 564 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD-AGCLPDAVTYNTLIDG 622
Query: 465 SMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ + + + + M + P++ T + R+ F +A E+ +
Sbjct: 623 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD---------- 672
Query: 524 TFLSGDGAPLKPDEYTYSSMLE----ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+++ G P+ TYSS+++ A YFE + + ++ ++ L+
Sbjct: 673 -YMAARGC--APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP---HVIAYSALI 726
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMA 634
+AG+ + ++ AG IP + F+ +LI + + + + L MA
Sbjct: 727 DGLCKAGRIDEAYEFLERMIRAGRIPDVVTFS-ILINGLCDAGRIDTGLELFCGMA 781
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 131/335 (39%), Gaps = 27/335 (8%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
RK P +V Y+ V++ ++ + +++ G P+A TY + +L
Sbjct: 25 RKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQ 84
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G+ +MA +G +T+ ++++ +EG+I A V M RG V ++
Sbjct: 85 GRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIH 144
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
L LC GR +A +++ + + P +T+ ++ G ++ + Q +
Sbjct: 145 TVLLHALCELGRVDEAWFFFQQVLLIGFT-PDAVTYNTMVDGLYKAGRLEAAGMVLQLLA 203
Query: 483 D-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
+ P + T + S+ + A E F+ + S P+ TY
Sbjct: 204 ESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS-------------PNTVTYD 250
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA-GKC--HLLEHAFDSL 598
++++ A + + +AL G D+ A + +S G C H LE A L
Sbjct: 251 ALIDGLCKAGKLD--------IAL-GLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL 301
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+P+ + F ++ ++A L + M
Sbjct: 302 KAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVM 336
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 124/618 (20%), Positives = 231/618 (37%), Gaps = 96/618 (15%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL 186
V+D+ V G F +VE H VL+ L E + W F + + G
Sbjct: 128 VVDEMVDRG---FVPDVEIHT------------VLLHALCELGRVDEAWFFFQQVLLIGF 172
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
++ GL G A VL L + + F +T + L KAG
Sbjct: 173 TPDAVTYNTMVDGLYKAGRLEAAGMVLQL---LAESFSSPTVFTFTIAVDGLSKAGNLTG 229
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A F+ M + + P+ Y ++ L + G L + L +R K S
Sbjct: 230 AYEFFDSMPQT-GVSPNTVTYDALIDGLCKAGKLDIALGL---LRDKNS----------- 274
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+ + ++++L+ +H+ + + K + P+ + M + Q+ + D
Sbjct: 275 ----QAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVD 327
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ-RGVVGTASVYYEL 425
E F M +SG + +TY +L++ + +I EA V M + G + L
Sbjct: 328 EAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTL 387
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL---IISSMDGGHIDDCISIFQHMK 482
LCN GR A V E++ ++ P T+ L + + D ++ C F+ M
Sbjct: 388 IQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQC---FEQML 444
Query: 483 DH----------------------CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
+ C P + T N ++ S++ M A L E +
Sbjct: 445 EREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGL 504
Query: 521 SG--YTFLSG-DGA-------------------PLKPDEYTYSSMLEA-SATAHQWEYFE 557
S TF S DG +P+ TYS++++ S A E +
Sbjct: 505 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQ 564
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+ K + L GC+ + ++ ++ + G+ + +AG +P + + ++
Sbjct: 565 LLAKMVEL-GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 623
Query: 618 IVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSE 677
+ +AV L+ M A FH + +T L D+ ++L+ + A +
Sbjct: 624 FKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNA 683
Query: 678 ITVSNLSRALHALCRSEK 695
IT S++ + LC++ +
Sbjct: 684 ITYSSI---VDGLCKAGR 698
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 131/326 (40%), Gaps = 20/326 (6%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+V YN ++N + + F F++ + G +P+ TY ++ + + + D +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+MA G A A+TY LV A +G+ EA + + M G + + LC G
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTV 492
+ A VV+++ +EI T L+ + + G +D+ FQ + P+ T
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEI-HTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N M+ + A + + + SS P +T++ ++ + A
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSS-------------PTVFTFTIAVDGLSKAGN 226
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+ M +G + + L+ +AGK L+ A LL +F
Sbjct: 227 LTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGK---LDIAL-GLLRDKNSQAGMFAFS 282
Query: 613 MLIQAIVQSN-YEKAVALINAMAYAP 637
L+ + Q++ E+A+ L+ AM P
Sbjct: 283 SLLHGLCQAHRLEEAIQLLKAMPCVP 308
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 32/212 (15%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D + Y L+ L + R +AL + M+ D PD Y +V L + G +
Sbjct: 853 DCRDEISYNTLITSLVASRRSEQALELLRAMVADGG-SPDACNYMTVMDGLFKAGSPEVA 911
Query: 284 VKLIERMRQK---PSKR---------------------IKNMHRKNWDPVLEPDLVVYNA 319
KL++ MR + P R + M RKN L+PD +VY++
Sbjct: 912 AKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKN----LKPDAIVYSS 967
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++A + + W K LR SG++P+ Y ++ + ++ D E R+M
Sbjct: 968 LIDAFCKADKVDDA-W--KLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKN 1024
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
G + L A+ EG+++EAV V +++
Sbjct: 1025 CEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 195/473 (41%), Gaps = 58/473 (12%)
Query: 146 HPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGS 205
HP + R EA+ +L+D S R MN L+ ++ GL G
Sbjct: 88 HPLCKARLLDEAMGLLLDMKS------------RGMNPGTLLHN-----VVIGGLCRAGR 130
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
R A+ V Y + YTKL+ L KAGR +A+++ M+ ++ PD
Sbjct: 131 LRHALGV----YRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHV-PDNT 185
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-C 324
V +L + + +L+E M +HR + + + Y+A+++ C
Sbjct: 186 TLTVVVQSLCLGDRVDDARELVEEM----------LHRG-----MAANAITYSALVDGLC 230
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ V + ++ + G P TY ++ + ++G+ + F +M+ + AI
Sbjct: 231 KCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI-- 288
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
TY L+ + G ++EA+ + M Y L C GR DA + ++
Sbjct: 289 -TYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQ 347
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRND 503
+ + + S P +TFT L+ G ++D + + + + + C P I T N ++ Y +++
Sbjct: 348 MVANKLS-PDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSN 406
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW-EYFEYVYKG 562
KA+EL + S G+ P+ TY+ ++ A + + +Y+ +
Sbjct: 407 QVRKAEELVADF---RSRGFV----------PNTVTYNILVAGCCRAGRTDQALQYLDQL 453
Query: 563 MALSG-CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ G C +A +L R G+ ++ +++ G +P F ++
Sbjct: 454 NSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 506
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 124/340 (36%), Gaps = 54/340 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y+ L+ L K R EA+ + + PDI Y +V L + G L++ V + E
Sbjct: 220 ITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 279
Query: 289 RMRQKPSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
M P+ N + K D PD++ Y +++A +
Sbjct: 280 EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLD 339
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+ +F+Q+ + L P T+ ++ + G+ + E ++ + G TY +V
Sbjct: 340 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 399
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ + ++ +A V + RG V Y L C GR A+ ++++ S
Sbjct: 400 DGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGP 459
Query: 452 KPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH----------------CE-------- 486
P + +I+ ++ G DD + ++ M C+
Sbjct: 460 CPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAH 519
Query: 487 ------------PNIGTVNAMLKVYSRNDMFSKAKELFEE 514
P GT +A++ Y R M KA EL E
Sbjct: 520 ELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 559
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+ ++R GL P + + + F KMA+ G A+ TY L+
Sbjct: 32 LLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPL 90
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ ++EA+ + +M+ RG+ ++ + LC GR + A+ V ++ P
Sbjct: 91 CKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH--PPD 148
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+T+T L+ G + D + + Q M H P+ T+ +++ D A+EL
Sbjct: 149 FLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHV-PDNTTLTVVVQSLCLGDRVDDARELV 207
Query: 513 EE 514
EE
Sbjct: 208 EE 209
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 143/326 (43%), Gaps = 17/326 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L+P +V + ++N ++ +F + G +P TY + + + G+ L
Sbjct: 41 LQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAA 100
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F+KM ++G + +TY L+ + + ++NEA+ M+ + + T Y L L
Sbjct: 101 GLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGL 160
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
CN RW++A ++ ++ SL + P +TF L+ + G + + + M + EP+
Sbjct: 161 CNFSRWKEASALLNEMTSL-NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T N+++ YS +A++LF+ KPD ++YS ++
Sbjct: 220 VVTYNSLMYGYSMWTEVVEARKLFDVMITKGC-------------KPDVFSYSILINGYC 266
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A + + + ++ M G + + L+ + G+ + F ++ G +P+ L
Sbjct: 267 KAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPN-L 325
Query: 609 FFTEMLIQAIVQSNY-EKAVALINAM 633
+ +L+ + Y KA L AM
Sbjct: 326 YTYAILLDGFCKQGYLGKAFRLFRAM 351
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 145/330 (43%), Gaps = 23/330 (6%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+R+ LD +K K + F YT L+ L R EA + N M N+ P++
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEM-TSLNIMPNVV 186
Query: 266 AYHSVAVTL---GQVGLLKELVKLIERMRQKPSKRIKN--MH-----------RKNWDPV 309
++ + T G+V + ++K + M +P N M+ RK +D +
Sbjct: 187 TFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVM 246
Query: 310 L----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
+ +PD+ Y+ ++N + + +F ++ G P+ +Y + + Q G+
Sbjct: 247 ITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRL 306
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+ F+ M +G TY +L+ F ++G + +A R M+ + +Y L
Sbjct: 307 REAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNIL 366
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 484
+C +G +DA + ++ + ++I +T +I G +D+ + F++M+D
Sbjct: 367 VNAMCKSGNLKDARELFSELFVIGLQPNVQI-YTTIINGLCKEGLLDEALEAFRNMEDDG 425
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
C P+ + N +++ + ++ S+A L E
Sbjct: 426 CPPDEFSYNVIIRGFLQHKDESRAVHLIGE 455
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ L+ KA R EA ++FN M+ + P+ +Y+++ L Q+G L+E L +
Sbjct: 256 FSYSILINGYCKAKRIDEAKQLFNEMIHQGST-PNNVSYNTLIHGLCQLGRLREAQDLFK 314
Query: 289 RM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M +Q + + R L+P+LV+YN ++NA S
Sbjct: 315 NMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSG 374
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
K +F +L GL+P+ Y + + + G D E FR M G +Y
Sbjct: 375 NLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYN 434
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
V++R F + + AV + M RG + A
Sbjct: 435 VIIRGFLQHKDESRAVHLIGEMRDRGFITDAG 466
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 132/340 (38%), Gaps = 42/340 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L K R +EAL IF+ M ++ P I Y S+ L KE L+ M
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAK-DISPTIFTYTSLIQGLCNFSRWKEASALLNEM 176
Query: 291 RQ---KPSKRIKNMHRKNW---------DPVL--------EPDLVVYNAVLNACVPSHQW 330
P+ N+ + + VL EPD+V YN+++ W
Sbjct: 177 TSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYG---YSMW 233
Query: 331 KGVF---WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
V +F + G KP +Y + + ++ + D + F +M G ++Y
Sbjct: 234 TEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSY 293
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + G++ EA +NM G + Y L C G A + ++S
Sbjct: 294 NTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 506
+ KP + + L+ + G++ D +F + +PN+ ++ + +
Sbjct: 354 -TYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLD 412
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+A E F + DG P PDE++Y+ ++
Sbjct: 413 EALEAFRN-----------MEDDGCP--PDEFSYNVIIRG 439
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 158/370 (42%), Gaps = 36/370 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L GL G R +S+ +G K+ + + + LL L K G+ +A ++ M
Sbjct: 306 LFDGLTRTGDSRTMLSL----FGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE-M 360
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L L P A Y+++ QV L+ + E+M+ S+ I+ PD
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMK---SRHIR------------PDH 405
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ YNA++N + ++ KSG+ PS T+ ++ ++G+ +
Sbjct: 406 ITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSD 465
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G +++ +V+AF + GKI EAVA + +M + VV A VY + +G
Sbjct: 466 MQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGG 525
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
+ A L+VEK+KS S + T+ L+ ID+ + ++ + P++ + N
Sbjct: 526 TEQAFLLVEKMKSSGVSASI-FTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYN 584
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
++ +A EL +E + + ++P TY +L A +A +
Sbjct: 585 TIISACCNKGDTDRALELLQEMHKYD-------------IRPTLRTYHPLLSALGSAGRV 631
Query: 554 EYFEYVYKGM 563
E +Y+ M
Sbjct: 632 HDMECLYQHM 641
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 18/281 (6%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++A L ++G+ +AL++F+ M+ D + P+ Y+++ + G L+ +L +
Sbjct: 196 FSYNVVIAGLWRSGKGSDALKVFDEMV-DRGVAPNQITYNTMIDGHVKGGDLEAGFRLRD 254
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M Q K P++V YN +L+ + + + ++ + P
Sbjct: 255 QMLQDGRK---------------PNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + + ++G + F + K G IGA T +L+ ++GK+ +A +
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+ G+V T ++Y L C Q A + E++KS RH +P IT+ LI
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKS-RHIRPDHITYNALINGLCKM 418
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 508
I + + M K +P++ T N ++ Y R K
Sbjct: 419 EMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKC 459
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 93/475 (19%), Positives = 169/475 (35%), Gaps = 68/475 (14%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL L GR + F L++ PD A++ G L E + ++ RM
Sbjct: 129 LLESLLSVGRHADVRAAFGLLVA-AGARPDTFAWNKAVQACVAAGDLDEALAMLRRM--- 184
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
R P PD YN V+ S + VF ++ G+ P+ TY
Sbjct: 185 --------GRSEGAP--PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYN 234
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME-- 411
++ ++ G + +M + G +TY VL+ G+++E A + M
Sbjct: 235 TMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSY 294
Query: 412 ---------------------------------QRGVVGTASVYYELACCLCNNGRWQDA 438
++GV+ A L LC +G+ A
Sbjct: 295 SMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKA 354
Query: 439 MLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAM 495
V+E L H+ P + LI + SIF+ MK H P+ T NA+
Sbjct: 355 EQVLEM---LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNAL 411
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
+ + +M ++A++L E ++ + P T++++++A A Q E
Sbjct: 412 INGLCKMEMITEAEDLVMEMEKSG-------------VDPSVETFNTLIDAYGRAGQLEK 458
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
V M G + + ++ + GK D ++ +P+ + ++
Sbjct: 459 CFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIID 518
Query: 616 QAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 670
I E+A L+ M + + + L + D+ E+L+ L N
Sbjct: 519 AYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTN 573
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 107/279 (38%), Gaps = 19/279 (6%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E + R + L++ L + EM + V M +SG+ + L+ G
Sbjct: 394 EQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRA 453
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + +VL ++DK + + ++ K G+ EA+ I + M+ ++ P+
Sbjct: 454 GQLEKCFTVLS---DMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHK-DVVPN 509
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
Y+S+ + G ++ L+E+M+ + + YN +L
Sbjct: 510 AQVYNSIIDAYIESGGTEQAFLLVEKMKSSG---------------VSASIFTYNLLLKG 554
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
+ Q + L GL+P +Y + G D E ++M K
Sbjct: 555 LCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPT 614
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
TY L+ A G++++ ++M + V ++S+Y
Sbjct: 615 LRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 161/403 (39%), Gaps = 45/403 (11%)
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S+ TL +GLL+ + +R R DP P + YN + +
Sbjct: 86 SLVRTLADLGLLENAISQFRSLRD----------RFPHDP---PPISFYNLLFRCSLKES 132
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ V W++K + + +KP T+ L + + + G + E F KM++ G +
Sbjct: 133 RVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLG 192
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+LVR + G + + + M G + Y + LC G+ +A +VEK++ +
Sbjct: 193 ILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREV 252
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-----PNIGTVNAMLKVYSRND 503
S P +TF I + G I + IF+ M+ E PN T N ML+ +
Sbjct: 253 GLS-PDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEG 311
Query: 504 MFSKAKELFE-----ETTRANSSGYTFL----SGD------------GAPLKPDEYTYSS 542
MF +A+ +F+ ET S L SG +KP+ Y+Y+
Sbjct: 312 MFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNI 371
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
++ + + M SG D ++ LL R GK + +++ G
Sbjct: 372 LVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVG 431
Query: 603 EIPHPLFFTEMLIQAIVQ----SNYEKAVALINAMAYAPFHIT 641
P+ ++ +L+ ++ + S E + ++N Y ++T
Sbjct: 432 CFPN-MYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/521 (18%), Positives = 186/521 (35%), Gaps = 45/521 (8%)
Query: 150 RWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
R + + +L+ L E + M++ G E + L++G G
Sbjct: 148 RVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHG 207
Query: 210 MSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
+ +LD ++ L +R Y +++ L G+ EA ++ M E L PDI ++
Sbjct: 208 IDLLDE---MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMRE-VGLSPDIVTFNC 263
Query: 270 VAVTLGQVGLLKELVKLIERMR-------QKPSKRIKNMH-------------RKNWDPV 309
L + G + E ++ M+ KP+ N+ R +D +
Sbjct: 264 RIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM 323
Query: 310 LEPD---LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+ L YN + V S + + ++ + +KP+ +Y + + + + G +
Sbjct: 324 KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFS 383
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
M +SG A +TY L+ + GKI EA +R M Q G L
Sbjct: 384 DARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILL 443
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 486
L GR +A +++ + R +T +I G++D I I M
Sbjct: 444 HSLWKEGRASEAEDLLQMMNE-RGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGS 502
Query: 487 PNIGTV-NAMLKVYSRNDMFSKAKELFEETT-------------RANSSGYTFLSGDGAP 532
++G + N+ + ++ D+ + K+ ++ R + + L G
Sbjct: 503 ASLGNLGNSFIDLF---DIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKK 559
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
L PD + + + + V K M GC + L+ + +
Sbjct: 560 LSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIY 619
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
D + E G P+ + ++ + A L++ M
Sbjct: 620 GLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEM 660
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 143/383 (37%), Gaps = 31/383 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK + + +LV L + M + + +M +SG+ LL G +G
Sbjct: 359 EKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKIL 418
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A VL + + + + LL L K GR EA + +M E D
Sbjct: 419 EANYVLREMIQVGC---FPNMYTCNILLHSLWKEGRASEAEDLLQMMNER-GYGLDNVTC 474
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH---------RKNWDPVLEPDLVVYN 318
+++ L + G L + ++++ M + S + N+ R N L PD + Y
Sbjct: 475 NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCL-PDSITYA 533
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
++ + ++ L P + + + + GK ++M K
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK 593
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G TY L++ E +I E + M++RG+ Y + CL G+ +DA
Sbjct: 594 GCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDA 653
Query: 439 MLVVEKIKSLRHSKPLEITF---TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAM 495
+++++ + P TF G + D G + I + H E
Sbjct: 654 TCLLDEMLQ-KGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKES-------- 704
Query: 496 LKVYSRNDMFS-----KAKELFE 513
L + N++ + KAKELFE
Sbjct: 705 LYSFMFNELLAGGETLKAKELFE 727
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 188/427 (44%), Gaps = 33/427 (7%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
SR +Y +++ K G P A ++ + ++ +++ ++ G++ L +
Sbjct: 553 SRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENF 612
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++ ++Q+PS + R+ W NA+++A S ++ VF + + G
Sbjct: 613 VKGLKQEPS-----IDRRIW-----------NALIHAYAESGLYEHARAVFDIMIEKGPL 656
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ + M ++ G+ D ++ +++ G I T +++ AF + G I E +
Sbjct: 657 PTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKI 716
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M++ G + +Y + LC N R++D L+V +++ L I T L++ +
Sbjct: 717 YNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYT- 775
Query: 467 DGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G+ D + ++ ++ EPN T N ++ +YSRN + +E G+T
Sbjct: 776 GNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRN---LRPEE-----------GFTL 821
Query: 526 LSGDGAP-LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
L+ G L P +Y S+L AS A WE E +++ + G +L+++ + L+
Sbjct: 822 LNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRD 881
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
A E S+ E G P ++ + ++A ++N++ + ++
Sbjct: 882 ACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLP 941
Query: 645 WTELFES 651
++ +F +
Sbjct: 942 YSTVFNA 948
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 157/391 (40%), Gaps = 69/391 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK--ELVKLI 287
V+ ++ + ++GR + ++ + M L PD+ +++++ + G L L+
Sbjct: 65 VFNAMMGVYARSGRFDDVRQLLDAM-RGQELEPDLVSFNTLINARAKSGCLAPGSAFDLL 123
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC---------------VPSHQWKG 332
+RQ L PD++ YN +++AC + + + +
Sbjct: 124 LEVRQVG---------------LRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRP 168
Query: 333 VFW--------------------VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
W +F++L + G KP A TY + + G D V
Sbjct: 169 DLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVC 228
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
++ ++G +TY ++ + + G+++ A+ M G A Y L L
Sbjct: 229 EELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKM 288
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
R DA V+E++ KP +TF+ LI + GG ++ + F HM +P+
Sbjct: 289 DRISDAGKVLEEMAD-AGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLA 347
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
ML + +R+ K L++ + GY +PD Y ML A A +
Sbjct: 348 YLVMLDIIARSGDMRKLMALYQTMM---NDGY----------RPDNALYQVMLAALAKGN 394
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+++ E V + M + CQ++ + +L++A
Sbjct: 395 EYDEIEAVVQDMEVV-CQMNPQLVSSILIKA 424
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 127/327 (38%), Gaps = 17/327 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWK--GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
LEPDLV +N ++NA S F + ++R+ GL+P TY + Q D
Sbjct: 94 LEPDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDD 153
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
F +M S TY +V GK +A R + ++G A Y L
Sbjct: 154 AVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLY 213
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 486
G V E++ K IT+ +I G +D + ++ M+ C
Sbjct: 214 AFAKEGDADTVERVCEELVRAGFKKD-GITYNTMIHMYGKMGRLDLALGLYDEMRALGCT 272
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+ T ++ + D S A ++ EE A LKP T+S+++ A
Sbjct: 273 PDAVTYTVLIDSLGKMDRISDAGKVLEEMADAG-------------LKPTLVTFSALICA 319
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
A + E + M SG + D+ + +L +R+G L + +++ G P
Sbjct: 320 YAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPD 379
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAM 633
+ ML + Y++ A++ M
Sbjct: 380 NALYQVMLAALAKGNEYDEIEAVVQDM 406
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 128/307 (41%), Gaps = 29/307 (9%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV-LVRAF 394
VF ++ G++PS Y + + G + H+ + +SG ++ L+ +V ++ A+
Sbjct: 541 VFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAY 600
Query: 395 WEEGKI---NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
GKI A V+ ++Q + ++ L +G ++ A V + I +
Sbjct: 601 ---GKIKLWQHAENFVKGLKQEPSIDR-RIWNALIHAYAESGLYEHARAVFD-IMIEKGP 655
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 510
P + G++ + + G +D+ I Q ++D + + TV ML D F+KA +
Sbjct: 656 LPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILML------DAFTKAGD 709
Query: 511 LFEETTRANS---SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+FE N +GY P+ + Y SM+ ++ E + M +G
Sbjct: 710 IFEVMKIYNGMKEAGYL----------PNMHIYRSMISLLCRNKRYRDVELMVVEMERAG 759
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
+ D T LL+ + G + S+LEAG P+ + +++ E+
Sbjct: 760 FEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGF 819
Query: 628 ALINAMA 634
L+N M
Sbjct: 820 TLLNEMG 826
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 161/403 (39%), Gaps = 45/403 (11%)
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S+ TL +GLL+ + +R R DP P + YN + +
Sbjct: 86 SLVRTLADLGLLENAISQFRSLRD----------RFPHDP---PPISFYNLLFRCSLKES 132
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ V W++K + + +KP T+ L + + + G + E F KM++ G +
Sbjct: 133 RVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLG 192
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+LVR + G + + + M G + Y + LC G+ +A +VEK++ +
Sbjct: 193 ILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREV 252
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-----PNIGTVNAMLKVYSRND 503
S P +TF I + G I + IF+ M+ E PN T N ML+ +
Sbjct: 253 GLS-PDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEG 311
Query: 504 MFSKAKELFE-----ETTRANSSGYTFL----SGD------------GAPLKPDEYTYSS 542
MF +A+ +F+ ET S L SG +KP+ Y+Y+
Sbjct: 312 MFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNI 371
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
++ + + M SG D ++ LL R GK + +++ G
Sbjct: 372 LVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVG 431
Query: 603 EIPHPLFFTEMLIQAIVQ----SNYEKAVALINAMAYAPFHIT 641
P+ ++ +L+ ++ + S E + ++N Y ++T
Sbjct: 432 CFPN-MYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 91/490 (18%), Positives = 177/490 (36%), Gaps = 45/490 (9%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M++ G E + L++G G + +LD ++ L +R Y +++ L
Sbjct: 179 MSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDE---MRSSGALPNRVAYNTVISSLCG 235
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR-------QK 293
G+ EA ++ M E L PDI ++ L + G + E ++ M+ K
Sbjct: 236 EGQTVEAEKLVEKMRE-VGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPK 294
Query: 294 PSKRIKNMH-------------RKNWDPVLEPD---LVVYNAVLNACVPSHQWKGVFWVF 337
P+ N+ R +D + + L YN + V S + +
Sbjct: 295 PNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLIL 354
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
++ + +KP+ +Y + + + + G + M +SG A +TY L+ +
Sbjct: 355 NEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRR 414
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
GKI EA +R M Q G L L GR +A +++ + R +T
Sbjct: 415 GKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNE-RGYGLDNVT 473
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAMLKVYSRNDMFSKAKELFEETT 516
+I G++D I I M ++G + N+ + ++ D+ + K+ ++
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLF---DIRNNGKKCLPDSI 530
Query: 517 -------------RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
R + + L G L PD + + + + V K M
Sbjct: 531 TYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM 590
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
GC + L+ + + D + E G P+ + ++
Sbjct: 591 EKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKL 650
Query: 624 EKAVALINAM 633
+ A L++ M
Sbjct: 651 KDATCLLDEM 660
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 143/383 (37%), Gaps = 31/383 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK + + +LV L + M + + +M +SG+ LL G +G
Sbjct: 359 EKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKIL 418
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A VL + + + + LL L K GR EA + +M E D
Sbjct: 419 EANYVLREMIQVGC---FPNMYTCNILLHSLWKEGRASEAEDLLQMMNER-GYGLDNVTC 474
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH---------RKNWDPVLEPDLVVYN 318
+++ L + G L + ++++ M + S + N+ R N L PD + Y
Sbjct: 475 NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCL-PDSITYA 533
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
++ + ++ L P + + + + GK ++M K
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK 593
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G TY L++ E +I E + M++RG+ Y + CL G+ +DA
Sbjct: 594 GCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDA 653
Query: 439 MLVVEKIKSLRHSKPLEITF---TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAM 495
+++++ + P TF G + D G + I + H E
Sbjct: 654 TCLLDEMLQ-KGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKES-------- 704
Query: 496 LKVYSRNDMFS-----KAKELFE 513
L + N++ + KAKELFE
Sbjct: 705 LYSFMFNELLAGGETLKAKELFE 727
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 161/408 (39%), Gaps = 41/408 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ + G +A +F+ M++ + PD+ Y S L + R
Sbjct: 230 YNTVIHGFFREGEVSKACNLFHEMMQQ-GVVPDVVTYSSYIDALCKA-----------RA 277
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K ++ M + EPD V YN +++ QWK +F+++ + GL P
Sbjct: 278 MDKAELVLRQMISNGF----EPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIF 333
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T M + + GK EFF MA G +TY VL+ + EG + + + +M
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM 393
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
E G+V SVY L G +AML+ +++ R P T+ +I + G
Sbjct: 394 EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQE-RGVMPDAWTYGTVIAAFSRMGR 452
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-----TTRANS---- 520
+ D + F M +P+ N++++ + + KAKEL E R N+
Sbjct: 453 LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFN 512
Query: 521 SGYTFLSGDGAPL--------------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
S L +G + +PD T++S+++ + E V M
Sbjct: 513 SIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISV 572
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
G + D ++ LL R G+ F +L G P + + +L
Sbjct: 573 GIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIIL 620
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 163/430 (37%), Gaps = 89/430 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G +AM + ++++ + + Y ++A + GR +A+ FN M+
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQ---MQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMI 464
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR---------IKNMHRKN- 305
L PD Y+S+ G L + +LI M + R I ++ ++
Sbjct: 465 A-MGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGR 523
Query: 306 -------WDPVL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+D V+ PD++ +N++++ + + F V + G++P TY
Sbjct: 524 VVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSA 583
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ ++G+ D FR+M G +TY +++ + +G+ A M + G
Sbjct: 584 LLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
S + LC N +A+ + +K+ + + + F II++M
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIALFKKLGA------MNVKFNIAIINTM-------- 689
Query: 475 ISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
++AM KV R + A ELF+ +S G L
Sbjct: 690 -----------------IDAMYKVRKREE----ANELFDS-----------ISATG--LV 715
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
P+ TY M+ E + ++ M SGC A LL +
Sbjct: 716 PNASTYGVMITNLLKEGSVEEADNMFSLMEKSGC----------------APSSRLLNNI 759
Query: 595 FDSLLEAGEI 604
LLE GEI
Sbjct: 760 IRVLLEKGEI 769
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 139/352 (39%), Gaps = 31/352 (8%)
Query: 310 LEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK---- 364
L+ D++V N +L C V + ++ + G++P +Y ++ + + +
Sbjct: 150 LKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRA 209
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
DL+H +K G + ++Y ++ F+ EG++++A M Q+GVV Y
Sbjct: 210 LDLLHTMVKK--SGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSS 267
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KD 483
LC A LV+ ++ S +P ++T+ +I G + +F+ M +
Sbjct: 268 YIDALCKARAMDKAELVLRQMIS-NGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRR 326
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN----------------SSGYT--- 524
P+I T N+ + ++ +A E F+ + GY
Sbjct: 327 GLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDM 386
Query: 525 ---FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
F S +G + D Y+ +++A + ++ M G D + ++
Sbjct: 387 LNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAA 446
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
SR G+ F+ ++ G P + + ++ + N KA LI+ M
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 115/273 (42%), Gaps = 30/273 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G G +A VLD + + + D+ + Y+ LL + GR + L +F ML
Sbjct: 549 LIDGYGLVGKMEKAFGVLDAMISVGIEPDVVT---YSALLDGYCRNGRIDDGLILFREML 605
Query: 256 EDCNLYPDIAAYHSV-------AVTLGQVGLLKELVKLIERMRQKPSKRI-KNMHRKNWD 307
+ P Y + T+G + E+++ M I + R N D
Sbjct: 606 SK-GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD 664
Query: 308 P------------VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
++ ++ + N +++A + + +F + +GL P+A+TYG+
Sbjct: 665 DEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVM 724
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ +L+ G + F M KSG A + ++R E+G+I++A + ++ + +
Sbjct: 725 ITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTI 784
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
AS + G+++ E+IKSL
Sbjct: 785 SLEASTASLMLSLFSRKGKYR------EQIKSL 811
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 47/234 (20%)
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV-A 405
P+ TY + M+ ++ + + F + K+G + +L++ + ++AV
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M + GV Y + LC + R Q A+ L H+ +
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRAL-------DLLHT-----------MVK 218
Query: 466 MDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
GG C PN+ + N ++ + R SKA LF E +
Sbjct: 219 KSGG---------------CSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQG------ 257
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ PD TYSS ++A A + E V + M +G + D+ + ++
Sbjct: 258 -------VVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMI 304
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 175/419 (41%), Gaps = 46/419 (10%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
GL + L+ LG G +A L + L + ++R Y LL K G
Sbjct: 265 GLTPRSNAVTALISALGGAGRVAEA-EALFLEFFLAGEIKPRTR-AYNALLKGYVKIGSL 322
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-------LLKEL------------VK 285
A ++ + M DC + PD A Y + + G LLKE+ +
Sbjct: 323 KNAEQVLDEM-SDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSR 381
Query: 286 LIERMR-----QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++ R QK ++ MH ++PD YN +++ + F ++
Sbjct: 382 ILAGFRDRGDWQKAFAVLREMHASG----VQPDRHFYNVMIDTFGKYNCLGHAMDAFNRM 437
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R+ G++P T+ ++ + G++D E F +M +S G TY +++ E+ +
Sbjct: 438 REEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERW 497
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+ M+++G+V Y L +GR+++A+ +E +K+ KP +
Sbjct: 498 VGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKA-DGLKPSPTMYHA 556
Query: 461 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L+ + G D +++ + M+ D E + +N+++ + + +A + +
Sbjct: 557 LVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQ------ 610
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
F+ + L+PD TY+++++A Q++ +Y+ M SGC D+ A L
Sbjct: 611 -----FMKEND--LRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPDRKARAML 662
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 26/341 (7%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL ++ + D
Sbjct: 354 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPD--- 410
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ FN M E+ + PD+ ++++ + G ++L
Sbjct: 411 RHFYNVMIDTFGKYNCLGHAMDAFNRMREE-GIEPDVVTWNTLIDAHRKGGRHDRAMELF 469
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E MR+ P YN ++N +W GV + ++++ GL P
Sbjct: 470 EEMRESNCP---------------PGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVP 514
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY ++V +SG++ E M G Y LV A+ + G + A+ V
Sbjct: 515 NIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVV 574
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ M G+ + V L + R +A V++ +K +P IT+T L+ + +
Sbjct: 575 KAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKE-NDLRPDVITYTTLMKALIR 633
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
D I++ M C P+ AML+ R ++K
Sbjct: 634 IEQFDKVPVIYEEMITSGCAPD-RKARAMLRSALRYMKYTK 673
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 159/422 (37%), Gaps = 60/422 (14%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTL------GQVGLLKELVKLIERMRQKP-----S 295
ALR+ L+ E L PD+A+Y + +L +L+ L+ + R +P S
Sbjct: 181 ALRLLALIREHGFL-PDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFS 239
Query: 296 KRIKNMHRKNWDPV------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
I R L P A+++A + + +F + +
Sbjct: 240 DLISAFARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLA 299
Query: 344 G-LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
G +KP Y ++ ++ G + +M+ G A TY +LV A+ G+
Sbjct: 300 GEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWES 359
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK-----IKSLRHSKPLEIT 457
A ++ ME GV ++ V+ + + G WQ A V+ + ++ RH
Sbjct: 360 ARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRH------- 412
Query: 458 FTGLIISSMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
F ++I + GH D F M++ EP++ T N ++ + + +A ELF
Sbjct: 413 FYNVMIDTFGKYNCLGHAMDA---FNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELF 469
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
EE +N P TY+ M+ +W E + M G +
Sbjct: 470 EEMRESNC-------------PPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNI 516
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALIN 631
+ L+ R+G+ + + G P P + L+ A Q + A+ ++
Sbjct: 517 ITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMY-HALVNAYAQRGLADHALNVVK 575
Query: 632 AM 633
AM
Sbjct: 576 AM 577
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 169/399 (42%), Gaps = 55/399 (13%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R ++T ++ L KA R EA +F M E C PD AY+++ L + G +E +K++
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 288 ERMRQKPS--------------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ M K +R + + R P+ V+Y ++++ S
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ K +F ++ ++G +P T+ + ++ + +SG ++ + F +M + G +TY
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+++ + G++ A ++ M G + Y L C GR +A +++++
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCI-SIFQHMKDHCEP-NIGTVNAMLKVYSRNDMF 505
S L++ ++ L+ DGG +++ + +F+ K E + G +++ +
Sbjct: 464 CSSSPNLQL-YSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRL 522
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML------------EASATAHQW 553
+A +F+ R S G KPD TY+ ++ A A H
Sbjct: 523 DEACRIFQ---RMVSEG----------CKPDATTYNILINGLCRSRENRVERAFALLHDL 569
Query: 554 EYFEYV-----YKGMALSGCQLDQTKHAW-LLVEASRAG 586
E Y+ Y + + C++ + A +L EAS G
Sbjct: 570 EMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/521 (19%), Positives = 194/521 (37%), Gaps = 85/521 (16%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LV+ L + + + R+M SG L+ G G ++A S+ D +
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 220 KDKRDLKSRFV--------------------------------YTKLLAILGKAGRPHEA 247
+ D+ + V YT ++ L K GR A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
RI M+ +PD Y + ++G L E +L++ + + S
Sbjct: 420 FRIMKGMIAH-GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS------------ 466
Query: 308 PVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSG--LKPSAATYGLAMEVML---Q 361
P+L +Y++++ C + +F+Q + + L P GL +++ +
Sbjct: 467 ---SPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDP-----GLCCSIIVGLCK 518
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW--EEGKINEAVAAVRNMEQRGVVGTA 419
+G+ D F++M G A TY +L+ E ++ A A + ++E G + A
Sbjct: 519 TGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDA 578
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y L LC G A+ ++E+ S R + +T L G +D +S+FQ
Sbjct: 579 VTYTPLCIGLCKIGEVDRAVKMLEEASS-RGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637
Query: 480 HM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M + P+ ++ + A + F+E G KP
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMI-------------GKGQKPTVA 684
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE-----H 593
TY+++++A A + + ++GM G + + ++ +A G C L+
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFEGMLARG----ELVGSVMIYDALIHGFCKALKVDAALK 740
Query: 594 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
F+ ++ G +P + + + EKA L+ MA
Sbjct: 741 LFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 131/328 (39%), Gaps = 24/328 (7%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
G ++ GL G +A + + K D + Y L+ L ++ R + R
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATT---YNILINGLCRS-RENRVERA 562
Query: 251 FNLM--LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
F L+ LE PD Y + + L ++G + VK++E + W+
Sbjct: 563 FALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR-----------GWNA 611
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
D+V Y A+ Q +F+++ + G P AA Y + +++ K +
Sbjct: 612 ----DVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDA 667
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG-VVGTASVYYELAC 427
+FF +M G+ TY LV+A G ++EA M RG +VG+ +Y L
Sbjct: 668 CKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIH 727
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
C + A+ + E + S R + P +T L + G + + Q M
Sbjct: 728 GFCKALKVDAALKLFEDMIS-RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSP 786
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEE 514
P+ T A+L ++D K +L +E
Sbjct: 787 PHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/462 (19%), Positives = 170/462 (36%), Gaps = 80/462 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + L+ + R +A+ F +M PD+ + + L + G
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAG---------- 203
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K + M + P PD ++ A++ + + + K VF Q+ K G P
Sbjct: 204 -MDEKAFEVFHEMMAMGFVP---PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259
Query: 349 A-----------------------------------ATYGLAMEVMLQSGKYDLVHEFFR 373
A TYG+ + + ++G + E FR
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
MA SG ++ Y L+ F + G++ EA + M + G + + LC +G
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
++ A E++ KP +T+T +I G + + I + M H C P+ T
Sbjct: 380 NFEQAAKSFEEMMR-GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTY 438
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+L + + +A +L +E + +SS P+ YSS+++
Sbjct: 439 ICLLDGFCKLGRLDEAAQLLDELDKCSSS-------------PNLQLYSSLVKGLCDGGS 485
Query: 553 WE-YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
E + +++ + LD ++V + G+ F ++ G P +
Sbjct: 486 VENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545
Query: 612 EMLIQAIVQS---NYEKAVALI----------NAMAYAPFHI 640
+LI + +S E+A AL+ +A+ Y P I
Sbjct: 546 -ILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCI 586
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 116/286 (40%), Gaps = 14/286 (4%)
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
++G + TY M +++ Y + +M K+G A ++ +L+R+F + +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+AV M+++ + L CLC G + A V ++ ++ P T +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231
Query: 462 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
+ + + + + +F M K P+ N M+ ++ +A ++ +
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML---- 287
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
P E TY ++ + A E E +++ MA SG + + + L+
Sbjct: 288 ---------AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
+++G+ FD ++EAG P + T M+ N+E+A
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 131/311 (42%), Gaps = 21/311 (6%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+H + + P+ +N ++ + + + F+ +++ KP T+ + ++ +
Sbjct: 141 IHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLC 200
Query: 361 QSGKYDLVHEFFRKMAKSG-EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++G + E F +M G + +VR + ++ EA ME+ G A
Sbjct: 201 KAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDA 260
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y + L G Q+A+ V++ + + + P E+T+ L+ S G ++ +F+
Sbjct: 261 IAYNTMIDGLAKAGHAQEALKVLDNMLA-KACVPTEVTYGILVNSLCKAGTLERAEELFR 319
Query: 480 HMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M PN +++ ++++ +A LF+E A GY +PD
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA---GY----------RPDVI 366
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
T++ M++ + +E ++ M GC+ + + ++ S+ G+ + +AF
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR---VANAFR-- 421
Query: 599 LEAGEIPHPLF 609
+ G I H F
Sbjct: 422 IMKGMIAHGCF 432
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 157/378 (41%), Gaps = 47/378 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G A++VLD + +R + YT LL K +A+++ + M
Sbjct: 38 LIRGLCGRGRTANALAVLDE---MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM- 93
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D PDI Y+ V + Q G + + IE ++ PS EP+ V
Sbjct: 94 RDKGCTPDIVTYNVVVNGICQEGRVDDA---IEFLKNLPSYGC------------EPNTV 138
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN VL + +W+ + ++ + G P+ T+ + + + + G + E ++
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 198
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G +L+Y L+ AF ++ K+++A+A + M RG Y L LC +G
Sbjct: 199 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 258
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ ++ ++K + P+ I++ +I G + + + M +P+I T +
Sbjct: 259 DVAVELLHQLKD-KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 317
Query: 495 MLKVYSRNDMFSKAKELFEET----TRANSSGY--------------------TFLSGDG 530
+ R D A F + R N+ Y ++ G+G
Sbjct: 318 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 377
Query: 531 APLKPDEYTYSSMLEASA 548
P+E TY+ ++E A
Sbjct: 378 C--MPNESTYTILIEGLA 393
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 141/341 (41%), Gaps = 28/341 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLM 254
LL+ + ++QAM +LD ++DK Y ++ + + GR +A+ NL
Sbjct: 73 LLEATCKRSGYKQAMKLLDE---MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 129
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM-----HRKNW 306
C P+ +Y+ V L ++ +L+ M QK P+ NM RK
Sbjct: 130 SYGCE--PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 187
Query: 307 -DPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+P LE P+ + YN +L+A + + G P +Y
Sbjct: 188 VEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 247
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + +SG+ D+ E ++ G A ++Y ++ + GK EA+ + M +G
Sbjct: 248 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 307
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ Y +A LC R +DA+ K++ + +P + + +I+
Sbjct: 308 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM-GIRPNTVLYNAIILGLCKRRETHSA 366
Query: 475 ISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
I +F +M + C PN T +++ + + +A++L +E
Sbjct: 367 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 407
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 111/279 (39%), Gaps = 15/279 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+EPD YN ++ + V ++ + P TY + +E + Y
Sbjct: 28 VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 87
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ +M G +TY V+V +EG++++A+ ++N+ G Y + L
Sbjct: 88 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 147
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C RW+DA ++ ++ + P +TF LI G ++ + + + + + C PN
Sbjct: 148 CTAERWEDAEELMGEMGQ-KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPN 206
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ N +L + + KA + + G PD +Y+++L A
Sbjct: 207 SLSYNPLLHAFCKQKKMDKAMAFLD-----------LMVSRGC--YPDIVSYNTLLTALC 253
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ + + + + GC + ++ ++AGK
Sbjct: 254 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 292
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 121/307 (39%), Gaps = 22/307 (7%)
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+ Y +V + G+++ AA R + + V A Y L LC GR +A+ V+++
Sbjct: 1 MAYNAMVAGYCGAGQLD---AARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 503
+ R P +T+T L+ ++ + + M+D C P+I T N ++ +
Sbjct: 58 MLR-RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
A E + N Y +P+ +Y+ +L+ TA +WE E + M
Sbjct: 117 RVDDAIEFLK-----NLPSYG--------CEPNTVSYNIVLKGLCTAERWEDAEELMGEM 163
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
GC + L+ R G + + + G P+ L + +L Q
Sbjct: 164 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 223
Query: 624 EKAVALINAM----AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEIT 679
+KA+A ++ M Y T L S E ++ + L +L + C S
Sbjct: 224 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 283
Query: 680 VSNLSRA 686
+ L++A
Sbjct: 284 IDGLTKA 290
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 27/258 (10%)
Query: 171 TAKNWK----FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRD 224
TA+ W+ + M Q G L+ L KG A+ VL+ + YG
Sbjct: 149 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT---- 204
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ Y LL K + +A+ +LM+ YPDI +Y+++ L + G + V
Sbjct: 205 -PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR-GCYPDIVSYNTLLTALCRSGEVDVAV 262
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L+ +++ K P L+ YN V++ + + K + ++ G
Sbjct: 263 ELLHQLKDKGCA---------------PVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 307
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
L+P TY + + + + F K+ G + Y ++ + + + A+
Sbjct: 308 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 367
Query: 405 AAVRNMEQRGVVGTASVY 422
M G + S Y
Sbjct: 368 DLFAYMIGNGCMPNESTY 385
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 169/407 (41%), Gaps = 41/407 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
VY L+ L + + EAL++ + + C PD+ ++ V L +V + + KL++
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFVMGC--MPDVQTFNDVIHGLCKVNKIHDATKLVD 312
Query: 289 RMRQK---PSK-----------RIKNMH--RKNWDPVLEPDLVVYNAVLNACVPSHQWK- 331
RM + P RI ++ RK + P+ + N ++N V S Q K
Sbjct: 313 RMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKE 372
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
++ + + G +P TY + M + + G + +M++ G +TY +LV
Sbjct: 373 AQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILV 432
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ G + EA + M RG+ + +Y L C LC + A+ ++ ++ + +
Sbjct: 433 NGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT-KGC 491
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
KP T+ LI ID+ +F +M D N T N ++ R F KA
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
L + G T D+ TY+ +++A E +Y+ M + G
Sbjct: 552 LVNDML---FRGCTL----------DKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGA 598
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEML 614
D ++ + GK +++AF+ L +A G +P + + +L
Sbjct: 599 DTISCNIMINGLCKVGK---VDNAFEFLRDAINRGFVPDIVTYNSVL 642
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 124/609 (20%), Positives = 238/609 (39%), Gaps = 96/609 (15%)
Query: 135 GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQML 194
GSD NVE P W S E ++T + +S ++ T Q+
Sbjct: 42 GSDPIKMNVESEPATEWESLLEPF----------DLTK--------LRKSHILITPVQLC 83
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
KLL+ D + + + G D VY + LG G+ ++ M
Sbjct: 84 KLLELPLDVPTLLEIFERVGGQKGYCHTFD-----VYYVFINKLGAIGKFKLIDKLLMQM 138
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E+ ++ + + + + G+ G + ++L+ MR + EP
Sbjct: 139 KEEGIVFRE-SIFMIIMKHYGKAGQPGQAIRLLLDMRAV--------------YLCEPTF 183
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y+ VL V + + VF + G+ P+ T+G+ M+ + + D R
Sbjct: 184 KSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRD 243
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K G ++ Y+ L+ A ++ +++EA+ + M G + + ++ LC +
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA 494
DA +V+++ LR P +T+ L+ G +++ I +K C PN +N
Sbjct: 304 IHDATKLVDRML-LRGFYPDNMTYGFLLHGLCRIGKLNEARKIL--IKIPC-PNNAILNT 359
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ Y + +A+ ET + G+ +PD +TY+ ++
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMI--NFGF----------QPDIFTYNILMHGLCKEGSLS 407
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + M+ GC+ + +A L+ +AG LLE EAG + H + +
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAG---LLE-------EAGLVLHEMSARGLT 457
Query: 615 IQAIVQSNYEKAVALINAMA-----YAPFHITERQWT-----ELFESNE--------DRI 656
I +++ + LI A+ + ++ T +LF N DRI
Sbjct: 458 INSVIYN------CLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRI 511
Query: 657 SRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS---EKERDLSSSAHFGSQAIDIS 713
D+ +L + + A ++ +T + L +HAL R +K L + F +D
Sbjct: 512 --DEAFRLFHNMLLDGAVANNVTYNTL---IHALLRRGAFQKALTLVNDMLFRGCTLDKI 566
Query: 714 PLHGIHEAF 722
+G+ +AF
Sbjct: 567 TYNGLIKAF 575
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 126/305 (41%), Gaps = 27/305 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G +A VL + R L + +Y L+ L + + H AL NL+
Sbjct: 431 LVNGLCKAGLLEEAGLVLHEM----SARGLTINSVIYNCLICALCRKEKVHVAL---NLL 483
Query: 255 LEDCN--LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
E C PD+ Y+S+ L +V + E +L H D +
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRL--------------FHNMLLDGAVAN 529
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
+ V YN +++A + ++ + + G TY ++ + G + E +
Sbjct: 530 N-VTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M G ++ +++ + GK++ A +R+ RG V Y + LC
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKDHCEPNIGT 491
GR ++A+ + ++++ + +P T+ I G ++D C+ ++ +++ P+ T
Sbjct: 649 GRIKEALNLFDRLQ-VEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLT 707
Query: 492 VNAML 496
N ++
Sbjct: 708 WNVLV 712
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 178/453 (39%), Gaps = 51/453 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ LL+ LG+AG +F M E ++ PDI Y + L + GL+ + +K+++R
Sbjct: 133 TFNSLLSALGRAGNLRGMTELFTSMRE-ASVKPDIVTYGILLNRLCKAGLVGDALKVLDR 191
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKS-GLKP 347
M S D+V+ N V++ C + +V +++R+ G P
Sbjct: 192 MSSPGSDVCA-------------DIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAP 238
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + + G D+ + +M K G +T +V G++ A+
Sbjct: 239 NTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFF 298
Query: 408 RN-----MEQRGVVGTASVYYELACCL--CNNGRWQDAMLVVEKIKSL--RHSKPLEITF 458
R +E RG A Y L CNN L +E + + P + +
Sbjct: 299 REKRTTWLEARG---NAVTYSTLVSAFLHCNN-----VALAMELFHEMADQGYPPDAVMY 350
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
+I G + D +I MK + + N ++ + R +A +LFEE
Sbjct: 351 FTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEM-- 408
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
GA L+PD YTY+++L A + + + M GCQ
Sbjct: 409 -----------KGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGT 457
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM--AY 635
L+ +AGK F S+ EA P+ + + ++ + A+ L + M
Sbjct: 458 LVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENN 517
Query: 636 APFHITERQWTELFESNEDRISRDKLEKLLNAL 668
P ++T + L + +D+ +K +L++ +
Sbjct: 518 VPANVT--TYNALLKGLQDKNMPEKAFELMDQM 548
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 132/346 (38%), Gaps = 64/346 (18%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD--LKSR---F 229
+ V M + G+ M ++ GL G A LD+ ++KR L++R
Sbjct: 260 CQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAA---LDF---FREKRTTWLEARGNAV 313
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ L++ A+ +F+ M D PD Y ++ L Q G L + +
Sbjct: 314 TYSTLVSAFLHCNNVALAMELFHEM-ADQGYPPDAVMYFTMISGLTQAGRLVDACNIAAS 372
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ K + RK YN ++ + +F++++ +GL+P
Sbjct: 373 MKKAGFK----LDRK-----------AYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDV 417
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + ++G + V E M G +T+ LV + + GK +EA+ R+
Sbjct: 418 YTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRS 477
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + + +Y L LC +
Sbjct: 478 MGEARIQPNTVIYNTLIDFLCKS------------------------------------R 501
Query: 470 HIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEE 514
+D I +F M+++ P N+ T NA+LK +M KA EL ++
Sbjct: 502 EVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQ 547
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 173/420 (41%), Gaps = 43/420 (10%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+H + + +VK + R+ P K + +H N P ++ YNAVL+A +
Sbjct: 121 TFHLCSSPFSSSAVFDLVVKSLSRLGFVP-KALTLLHLANRHG-FAPTVLSYNAVLDALL 178
Query: 326 ----PSHQ-WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+H+ + VF+ + ++G+ P+ TY + + ++ G + F RKM K G
Sbjct: 179 RRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGI 238
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ +TY L+ A ++ K+ EA+A +R M GV Y + LC GR +
Sbjct: 239 SPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGE 298
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 499
+VE+++ + P E+T+ L+ G++ + + M PN+ T ++
Sbjct: 299 LVEEMRG-KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCM 357
Query: 500 SRNDMFSKAKELFEET----TRANSSGYTFLSGDG-------------------APLKPD 536
+ S+A E+F++ R N YT L DG + P
Sbjct: 358 CKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI-DGFCQKGLMNEAYKVLSEMIVSGFSPS 416
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC--HLLEHA 594
TY++++ + + + +GM G D ++ ++ AG C L A
Sbjct: 417 VVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVI-----AGFCRERELGKA 471
Query: 595 F---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
F + ++E G +P + ++ ++ +Q +A L M E +T L +
Sbjct: 472 FQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINA 531
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 182/453 (40%), Gaps = 65/453 (14%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK-----------RIKNMHR----- 303
++ +Y+SV L G + E+ +L+E MR K P + + N+H+
Sbjct: 276 NLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLL 335
Query: 304 -KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
+ L P++V Y ++N + +F Q+R GL+P+ TY ++ Q
Sbjct: 336 SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G + ++ +M SG + +TY LV + G++ EAV +R M +RG+ Y
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-M 481
+ C A + E++ + P +T++ LI + + +F+ M
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMVE-KGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMM 514
Query: 482 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA-----NSSGYTFLSGDGAPLK-- 534
+ P+ T +++ Y + SKA L +E + N + ++G +
Sbjct: 515 RRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTK 574
Query: 535 ---------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
PD+ TY++++E + + ++++ E + KG + G L+
Sbjct: 575 VAKRLLLKLFYEESVPDDVTYNTLIE-NCSNNEFKSVEGLVKGFCMKG----------LM 623
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 639
EA R F ++L+ P+ + M+ N KA L + ++ F
Sbjct: 624 NEADR---------VFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFA 674
Query: 640 ITERQWTELFESNEDRISRDKLEKLL-NALCNC 671
L ++ D+L +LL N L +C
Sbjct: 675 CHTVAVIALVKALAREGMNDELSRLLQNILRSC 707
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 163/385 (42%), Gaps = 34/385 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G+ A+++ D ++ K L + Y L+ K + + ++ M
Sbjct: 211 LIRGFCFAGNIDVALTLFD---KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L P++ +Y+ V L + G +KE+ S + M+R+ + D V
Sbjct: 268 LK-GLEPNLISYNVVINGLCREGRMKEV-----------SFVLTEMNRRGYSL----DEV 311
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++ + + ++ + GL PS TY + M ++G + EF +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G TY LV F ++G +NEA +R M G + Y L C G+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+DA+ V+E +K + P ++++ ++ +D+ + + + M + +P+ T ++
Sbjct: 432 EDAIAVLEDMKE-KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+++ + +A +L+EE R G P PDE+TY++++ A E
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRV-----------GLP--PDEFTYTALINAYCMEGDLE 537
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLL 579
++ M G D ++ L+
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLI 562
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/442 (20%), Positives = 173/442 (39%), Gaps = 32/442 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ AG AL +F+ M E P++ Y+++ ++ + + KL+
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR 264
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M K LEP+L+ YN V+N + K V +V ++ + G
Sbjct: 265 SMALKG---------------LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY ++ + G + +M + G +TY L+ + + G +N A+ +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M RG+ Y L G +A V+ ++ S P +T+ LI
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS-PSVVTYNALINGHCVT 428
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G ++D I++ + MK+ P++ + + +L + R+ +A + E
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG-------- 480
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+KPD TYSS+++ + + +Y+ M G D+ + L+ G
Sbjct: 481 -----IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 647
+ ++E G +P + ++ ++ QS +A L+ + Y ++ +
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 648 LFESNEDRISRDKLEKLLNALC 669
L E N I + L+ C
Sbjct: 596 LIE-NCSNIEFKSVVSLIKGFC 616
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 163/411 (39%), Gaps = 56/411 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDW--VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ + G+ +AM LD V GL + YT L+ + G +EA R+
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGL-----CPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M D P + Y+++ G +++ + ++E M++K L PD
Sbjct: 406 M-NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG---------------LSPD 449
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+V Y+ VL+ S+ V +++ + G+KP TY ++ + + + +
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M + G TY L+ A+ EG + +A+ M ++GV+ Y L L
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 493
R ++A ++ K+ S P ++T+ LI ++C +I +V
Sbjct: 570 RTREAKRLLLKL-FYEESVPSDVTYHTLI---------ENCSNI----------EFKSVV 609
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+++K + M ++A ++FE N KPD Y+ M+ A
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNH-------------KPDGTAYNIMIHGHCRAGDI 656
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+YK M SG L L+ + GK + L +L + E+
Sbjct: 657 RKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 153/389 (39%), Gaps = 74/389 (19%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFW-VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P ++ YNAVL+A + S + VFK++ +S + P+ TY + + +G D+
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F KM G +TY L+ + + KI++ +R+M +G+ Y + LC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 431 NNGRWQDAMLVVEKI---------------------------------KSLRHS-KPLEI 456
GR ++ V+ ++ + LRH P I
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+T LI S G+++ + M+ C PN T ++ +S+ ++A + E
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 515 TTRANSSGYT--------FLSGDGAP-----------------LKPDEYTYSSMLEASAT 549
N +G++ ++G L PD +YS++L
Sbjct: 406 ---MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLL---VEASRAGK-CHLLEHAFDSLLEAGEIP 605
++ + V + M G + D ++ L+ E R + C L ++ +L G P
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL----YEEMLRVGLPP 518
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+T ++ ++ + EKA+ L N M
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMV 547
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/408 (19%), Positives = 163/408 (39%), Gaps = 44/408 (10%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-----FVYT 232
+R++++ G+ +L L D+G +QAM VL R L+S+ T
Sbjct: 169 LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG--------RQLQSKCYPDVVTCT 220
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
L+ K +A+++FN M PD+ Y+ + + G L E ++ ++++
Sbjct: 221 VLIDATCKESGVGQAMKLFNEMRNK-GCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKL-- 277
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
PS +PD++ +N +L + +W + + + G PS T+
Sbjct: 278 -PSYGC------------QPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTF 324
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ + + Q G M K G + ++ L++ F I+ A+ + M
Sbjct: 325 NILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVS 384
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
RG Y L LC +G+ DA++++ ++ S + P I++ +I + G +
Sbjct: 385 RGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS-KGCSPSLISYNTVIDGLLKVGKAE 443
Query: 473 DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ + + M +P++ T +++ SR +A + F R
Sbjct: 444 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKR-------------F 490
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++P+ + Y+S++ + Q M GC+ + + L+
Sbjct: 491 AIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLI 538
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/438 (18%), Positives = 166/438 (37%), Gaps = 33/438 (7%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T L+ K GR A +I + LE+ D+ +Y+ + + G ++E +++++RM
Sbjct: 118 TALIREFCKIGRTKNASQIMGI-LEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMG 176
Query: 292 QKPS-----------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
P+ K+ + + PD+V +++A
Sbjct: 177 VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 236
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+F ++R G KP TY + ++ + G+ D F +K+ G +++ +++R+
Sbjct: 237 KLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSL 296
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
G+ +A+ + M ++G + + + L LC G A+ V+E + H+ P
Sbjct: 297 CSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT-PN 355
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
+F LI +G ID I + M C P+I T N +L ++ A +
Sbjct: 356 SRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 415
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
+ + S P +Y+++++ + E + + M G + D
Sbjct: 416 QLSSKGCS-------------PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLI 462
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ SR GK F L P+ + ++ A+ + M
Sbjct: 463 TCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADM 522
Query: 634 AYAPFHITERQWTELFES 651
TE +T L +
Sbjct: 523 VAKGCKPTEATYTTLIKG 540
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 136/346 (39%), Gaps = 31/346 (8%)
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
++++G+ + F M G++ + L+R F + G+ A + +E+ G V
Sbjct: 89 LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
+ Y L C +G ++A+ V++++ P T+ ++ S D G + + +
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM----GVSPNAATYDAVLCSLCDRGKLKQAMQVL 204
Query: 479 -QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
+ ++ C P++ T ++ + +A +LF E KPD
Sbjct: 205 GRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGC-------------KPDV 251
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
TY+ +++ + + K + GCQ D H +L G+ +
Sbjct: 252 VTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLAT 311
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMAYAPFHITERQWTELFE--SNED 654
+L G +P + F +LI + Q KA+ ++ M R + L + N
Sbjct: 312 MLRKGCLPSVVTF-NILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGK 370
Query: 655 RISR--DKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
I R + LE +++ C +I N+ L ALC+ K D
Sbjct: 371 GIDRAIEYLEIMVSRGC-----YPDIVTYNI--LLTALCKDGKVDD 409
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 107/258 (41%), Gaps = 21/258 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L++ L ++ + K + +M + G L++G + +A+ L+ +
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVG 278
D+ Y LL L K G+ +A+ I + L + C+ P + +Y++V L +VG
Sbjct: 386 GCYPDI---VTYNILLTALCKDGKVDDAVVILSQLSSKGCS--PSLISYNTVIDGLLKVG 440
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ V+L+E M K L+PDL+ +V+ + + F
Sbjct: 441 KAELAVELLEEMCYKG---------------LKPDLITCTSVVGGLSREGKVREAMKFFH 485
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
L++ ++P+A Y + + +S + L +F M G TY L++ EG
Sbjct: 486 YLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEG 545
Query: 399 KINEAVAAVRNMEQRGVV 416
+A + RG+V
Sbjct: 546 LAEDASKLSNELYSRGLV 563
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 102/277 (36%), Gaps = 52/277 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL------- 248
+L+ L G W AM +L + K L S + L+ L + G +AL
Sbjct: 292 ILRSLCSGGRWMDAMKLLATML---RKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMP 348
Query: 249 --------RIFNLMLED-CN------------------LYPDIAAYHSVAVTLGQVGLLK 281
R FN +++ CN YPDI Y+ + L + G +
Sbjct: 349 KHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVD 408
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+ V ++ ++ K P L+ YN V++ + + + + +++
Sbjct: 409 DAVVILSQLSSKGC---------------SPSLISYNTVIDGLLKVGKAELAVELLEEMC 453
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
GLKP T + + + GK +FF + + A Y ++ + + +
Sbjct: 454 YKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTS 513
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
A+ + +M +G T + Y L + G +DA
Sbjct: 514 LAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDA 550
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 176/460 (38%), Gaps = 67/460 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLV+ LS + + + + M+ GL + L++G K + +A + + G
Sbjct: 247 VLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG- 305
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ L + Y ++ L + GR +A R ++M+ + +L PD+ +Y+++ ++G
Sbjct: 306 --RGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNE-DLMPDLVSYNTLIYGYSRLGN 362
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E + L +R K L P +V YN +++ + +
Sbjct: 363 FAEALLLFSELRSKN---------------LVPSVVTYNTLIDGGCRTGNLDIAKGMKDD 407
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ K GL P T+ + + Q G + E F +M G + Y + + G
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGN 467
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK------------S 447
++A M+ G Y L LC G + DA +V+K++ S
Sbjct: 468 PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTS 527
Query: 448 LRHSK----------------------PLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 484
+ H+ P +T+T LI S G +D F M+D
Sbjct: 528 IIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG 587
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
PN+ T NA++ + +M A LF E S P++YTY+ ++
Sbjct: 588 VSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVS-------------PNKYTYTILI 634
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
++ W+ +YK M + D H+ L+ S+
Sbjct: 635 NENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSK 674
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 124/335 (37%), Gaps = 51/335 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P +V +N ++++ + V +R G P+ +Y + + + G++D
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E +M+ G + A TY L+R F ++ EA R M RG + T Y + L
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
C GR DA + L++ + + P++
Sbjct: 323 CRLGRVSDA------------RRYLDVM-----------------------VNEDLMPDL 347
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+ N ++ YSR F++A LF E N L P TY+++++
Sbjct: 348 VSYNTLIYGYSRLGNFAEALLLFSELRSKN-------------LVPSVVTYNTLIDGGCR 394
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + + M G D L+ + G + + FD +L G P +
Sbjct: 395 TGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIA 454
Query: 610 FTEMLIQAIVQSNYEKAVAL---INAMAYAPFHIT 641
+T ++ + N KA + + A + P IT
Sbjct: 455 YTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLIT 489
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 169/462 (36%), Gaps = 73/462 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL KG + +A +++ + GLK S Y L+ K EA +
Sbjct: 248 LVNGLSGKGEFDRAKELIEQMSMLGLK-----VSAHTYNPLIRGFCKKEMFEEANDLRRE 302
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
ML L P + Y+++ +L ++G + + + ++ M N D L PD
Sbjct: 303 MLGRGAL-PTVVTYNTIMYSLCRLGRVSDARRYLDVM-------------VNED--LMPD 346
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
LV YN ++ + +F +LR L PS TY ++ ++G D+
Sbjct: 347 LVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKD 406
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
M K G +T+ +LVR F + G + A M RG+
Sbjct: 407 DMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGL------------------ 448
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTV 492
KP I +T I+ + G+ + + MK + P++ T
Sbjct: 449 ------------------KPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITY 490
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N ++ + F A EL ++ L G + PD TY+S++ A +
Sbjct: 491 NVLINGLCKLGNFDDANELVQKMR---------LEG----IVPDHVTYTSIIHAHLISGL 537
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
E V+ M G + L+ + G+ + FD + + G P+ + +
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNA 597
Query: 613 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNED 654
++ ++ + A L M + +T L N +
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSN 639
>gi|299473702|emb|CBN78095.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 537
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 18/232 (7%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G W++AMS++ + KD F Y+ ++ G+ G+P +AL + + M++ + PD
Sbjct: 144 GRWKEAMSMMKQME--KDGIAF-DEFTYSSVIVACGRGGQPRKALELLDEMVQVHGIAPD 200
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y + G GL +E + L+E+M ++ L PD YN+ + A
Sbjct: 201 MICYGAAIQACGDAGLTEEALSLMEKMSREG---------------LLPDKTAYNSAIIA 245
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
C QW+ + ++R GL+P +Y AM+ G+++ + +M + G
Sbjct: 246 CGEKGQWEKALNLLGEMRSKGLRPDQNSYRFAMQACSTGGRWERALQLLHEMEEDGSTPD 305
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
++ + A + + +A+ + M++ GV + + G W
Sbjct: 306 VAAFQTALDALKDAAQWEKAMDLISEMDELGVPPSEGCFAAAIAACAEVGEW 357
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 110/252 (43%), Gaps = 18/252 (7%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
LK LG +G W A L G + + + ++Y ++ + KAGR EA+ + M +
Sbjct: 102 LKKLGQRGQWEDATRAL---VGARVRGVPVNVYMYNSAISAVSKAGRWKEAMSMMKQMEK 158
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
D + D Y SV V G+ G ++ ++L++ M Q +H + PD++
Sbjct: 159 DGIAF-DEFTYSSVIVACGRGGQPRKALELLDEMVQ--------VHG------IAPDMIC 203
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y A + AC + + + +++ + GL P Y A+ + G+++ +M
Sbjct: 204 YGAAIQACGDAGLTEEALSLMEKMSREGLLPDKTAYNSAIIACGEKGQWEKALNLLGEMR 263
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G +Y+ ++A G+ A+ + ME+ G + + L + +W+
Sbjct: 264 SKGLRPDQNSYRFAMQACSTGGRWERALQLLHEMEEDGSTPDVAAFQTALDALKDAAQWE 323
Query: 437 DAMLVVEKIKSL 448
AM ++ ++ L
Sbjct: 324 KAMDLISEMDEL 335
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 24/215 (11%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M++ GL+ + + G+KG W +A+++L + + D S Y +
Sbjct: 227 MSREGLLPDKTAYNSAIIACGEKGQWEKALNLLGEMRSKGLRPDQNS---YRFAMQACST 283
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKR 297
GR AL++ + M ED + PD+AA+ + L ++ + LI M + PS+
Sbjct: 284 GGRWERALQLLHEMEEDGST-PDVAAFQTALDALKDAAQWEKAMDLISEMDELGVPPSEG 342
Query: 298 I------KNMHRKNWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
W P L+P+L Y +++ AC+ ++ L
Sbjct: 343 CFAAAIAACAEVGEWLPASTARKLMGYYGLQPELETYKSIIKACLVGKEFNMALTTLFDL 402
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+KSG + T+ + +E+ GK+D E R +
Sbjct: 403 QKSGRRADQETWDMLIEICAVVGKWDAALEIIRDI 437
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 16/240 (6%)
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G+ +A A+ RGV +Y + GRW++AM ++++++ + E
Sbjct: 107 QRGQWEDATRALVGARVRGVPVNVYMYNSAISAVSKAGRWKEAMSMMKQMEKDGIAFD-E 165
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
T++ +I++ GG + + M P++ A ++ + +A L E
Sbjct: 166 FTYSSVIVACGRGGQPRKALELLDEMVQVHGIAPDMICYGAAIQACGDAGLTEEALSLME 225
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
+ +R L PD+ Y+S + A QWE + M G + DQ
Sbjct: 226 KMSREG-------------LLPDKTAYNSAIIACGEKGQWEKALNLLGEMRSKGLRPDQN 272
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ + + S G+ + E G P F L + +EKA+ LI+ M
Sbjct: 273 SYRFAMQACSTGGRWERALQLLHEMEEDGSTPDVAAFQTALDALKDAAQWEKAMDLISEM 332
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 123/284 (43%), Gaps = 18/284 (6%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ K G A I+ +L+ ++YP+I +Y+ + L + G E ++ R
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ + DL Y+ +++ S G V+K++ ++G+ P
Sbjct: 281 MKKNERGQ---------------DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDV 325
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y + L++G+ + E ++ M K G ++Y +L+R +E K++EA++
Sbjct: 326 VVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWEL 384
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ ++ + Y L LC NG A+ ++E+ ++ R ++ +I G
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD-TFAYSSMINGLCREG 443
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+D+ + M H C+PN NA++ + R A F
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/506 (19%), Positives = 197/506 (38%), Gaps = 41/506 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L + W +A S + + +L++ Y L+ I + + +A + N M
Sbjct: 120 LLNALIESNKWDEAESFFLYFETMGLSPNLQT---YNILIKISCRKKQFDKAKELLNWMW 176
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E PD+ +Y ++ +L + G + + +KL + M ++ + PD+
Sbjct: 177 EQ-GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG---------------VTPDVA 220
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN +++ ++++L K + P+ +Y + + + + GK+D E + +
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K+ TY L+ G ++ A + M + GV VY + GR
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTV 492
++ L + K+ + + +++ LI + +D+ ISI++ + KD C ++ T
Sbjct: 341 IEEC-LELWKVMEKEGCRTV-VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSM-TY 397
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ +N +KA + EE GD D + YSSM+ +
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGR--------GD-----LDTFAYSSMINGLCREGR 444
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+ V M GC+ + ++ RA K F +++ G P + +
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504
Query: 613 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCN 672
++ + +A AL+ M + + ++ L KL+ LN C
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG---LCQGKKLDMALNLWCQAL 561
Query: 673 AASSEITVSNLSRALHALCRSEKERD 698
+ V + +H LC S K D
Sbjct: 562 EKGFKPDVKMHNIIIHGLCSSGKVED 587
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 138/360 (38%), Gaps = 37/360 (10%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+++ +L PH AL IF+ + +H + L L+ + +++E +R
Sbjct: 12 RVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRT 71
Query: 293 KPSK-------RIKNMHRKNWDP--------------VLEPDLVVYNAVLNACVPSHQWK 331
+ K + + KN P +P + YN++LNA + S++W
Sbjct: 72 QKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWD 131
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
F GL P+ TY + +++ + ++D E M + G + +Y L+
Sbjct: 132 EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLI 191
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ + G +++A+ M +RGV + Y L G +A + E++
Sbjct: 192 NSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSV 251
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P ++ +I G D+ I+ MK K D+++ + +
Sbjct: 252 YPNIPSYNVMINGLCKCGKFDESFEIWHRMK--------------KNERGQDLYTYSTLI 297
Query: 512 FEETTRANSSGYTFLSGDGAP--LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
N G T + + A + PD Y++ML A + E ++K M GC+
Sbjct: 298 HGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR 357
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 129/313 (41%), Gaps = 22/313 (7%)
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTL 274
++ + +K ++ Y L+ L + + EA+ I+ L+ E DC D Y + L
Sbjct: 347 LWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDC--CADSMTYGVLVHGL 404
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G L + + ++E + D Y++++N + V
Sbjct: 405 CKNGYLNKALSILEEAENGRG---------------DLDTFAYSSMINGLCREGRLDEVA 449
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
V Q+ K G KP+ + +++ K + FF M G +TY L+
Sbjct: 450 GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 509
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ + +EA A V+ M +G Y L LC G+ D L + + KP
Sbjct: 510 SKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC-QGKKLDMALNLWCQALEKGFKP- 567
Query: 455 EITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
++ +II + G ++D + ++ MK C PN+ T N +++ + + F +A +++
Sbjct: 568 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIW 627
Query: 513 EETTRANSSGYTF 525
+ ++ SS +
Sbjct: 628 DHILQSWSSSNCY 640
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 91/222 (40%), Gaps = 21/222 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G +A+S+L+ ++ R F Y+ ++ L + GR E + + M
Sbjct: 400 LVHGLCKNGYLNKALSILEEA---ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 456
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P + ++V + L++ ++ M K P +
Sbjct: 457 KHGCKPNPHVC--NAVINGFVRASKLEDALRFFGNMVSKGCF---------------PTV 499
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN ++N + ++ + + K++ G KP+ TY L M + Q K D+ + +
Sbjct: 500 VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 559
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ G + +++ GK+ +A+ M+QR V
Sbjct: 560 ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV 601
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 158/398 (39%), Gaps = 31/398 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ L G+ EAL + + P++ Y+++ + G + +L+
Sbjct: 155 YTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVG 214
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR+ + P LV +N V+N + + + +F ++ + GL P
Sbjct: 215 VMREGGVR---------------PSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPD 259
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+Y + ++G F +MA+ G +T+ L+ A G + AVA V
Sbjct: 260 GVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVG 319
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +RG+ + L C NG DA+L +++++ R +P + + LI
Sbjct: 320 QMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR-IQPSVVCYNVLINGYCKL 378
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G +D+ + M+ +P++ T + +L Y + FE + G
Sbjct: 379 GRMDEARELIHEMEAKGMKPDVVTYSTILSGYCK---IGDTDSAFELNRKMLKKGVV--- 432
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
PD TYSS++ + +++ M G Q D+ + L+ + G
Sbjct: 433 -------PDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGN 485
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
D +++ G +P + ++ +LI + +S K
Sbjct: 486 VQKALSLHDEMIKKGVLPDVVTYS-VLIDGLSKSARTK 522
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 79/213 (37%), Gaps = 17/213 (7%)
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G PS Y A+ + L M + G A TY +LVRA G+ EA
Sbjct: 115 GYAPSLLAYN-AVLLALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 404 VAAVR-NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
+ V +M G Y L C G A +V ++ +P +TF ++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMRE-GGVRPSLVTFNTVV 232
Query: 463 ISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G ++D +F M ++ P+ + N ++ Y + +A +F E +
Sbjct: 233 NGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG-- 290
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+ PD T++S++ A A E
Sbjct: 291 -----------VVPDVVTFTSLIHAMCRAGNLE 312
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 13/167 (7%)
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
C PN+ T N ++ + R A+ L ++P T+++++
Sbjct: 186 CAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGG-------------VRPSLVTFNTVV 232
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
A + E ++ MA G D + L+ +AG H F + + G +
Sbjct: 233 NGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVV 292
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
P + FT ++ N E+AVAL+ M + E +T L +
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDG 339
>gi|255660956|gb|ACU25647.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 376
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 124/290 (42%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VV NA+LN + K F +++ + G S +++ + M + +GK D V
Sbjct: 21 VSPDAVVCNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG ++TY +LV F + G ++++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKESGFVEDSITYGILVHGFCKNGYSDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ IKS KP + LI + +D I +F+ M HC P
Sbjct: 140 CKEANLDRALYVLNGMIKS--GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A L +E L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYNLVKELLDKG-------------LDPGVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 127/303 (41%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+ + +K+ ++ Y L+ K G ++L + M
Sbjct: 65 MMRGLFDNGKVDEVISIWEL---MKESGFVEDSITYGILVHGFCKNGYSDKSLHVLE-MA 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L + ++ M + K P++
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCK---------------PNVH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N V + +++ VF+++ P+ TY + + ++ + + +++
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G G +TY +L++ + K+ A+ + +G ++ L LC+ G+
Sbjct: 226 LDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
Q A+ + + + P ++ L+ G I + + I+ +++ EP+I + N
Sbjct: 286 QLALSLYFDMNRWK-CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNI 344
Query: 495 MLK 497
LK
Sbjct: 345 TLK 347
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 153/377 (40%), Gaps = 31/377 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ K G A I+ +L+ ++YP+I +Y+ + L + G E ++ R
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ + DL Y+ +++ S G V+K++ ++G+ P
Sbjct: 281 MKKNERGQ---------------DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDV 325
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y + L++G+ + E ++ M K G ++Y +L+R +E K++EA++
Sbjct: 326 VVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWEL 384
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ ++ + Y L LC NG A+ ++E+ ++ R ++ +I G
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD-TFAYSSMINGLCREG 443
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+D+ + M H C+PN NA++ + R A F
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF------- 496
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
P TY++++ + A ++ + K M G + + ++ L+ + K
Sbjct: 497 ------PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKL 550
Query: 589 HLLEHAFDSLLEAGEIP 605
+ + + LE G P
Sbjct: 551 DMALNLWCQALEKGFKP 567
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/506 (19%), Positives = 197/506 (38%), Gaps = 41/506 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L + W +A S + + +L++ Y L+ I + + +A + N M
Sbjct: 120 LLNALIESNKWDEAESFFLYFETMGLSPNLQT---YNILIKISCRKKQFDKAKELLNWMW 176
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E PD+ +Y ++ +L + G + + +KL + M ++ + PD+
Sbjct: 177 EQ-GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG---------------VTPDVA 220
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN +++ ++++L K + P+ +Y + + + + GK+D E + +
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K+ TY L+ G ++ A + M + GV VY + GR
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTV 492
++ L + K+ + + +++ LI + +D+ ISI++ + KD C ++ T
Sbjct: 341 IEEC-LELWKVMEKEGCRTV-VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSM-TY 397
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ +N +KA + EE GD D + YSSM+ +
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGR--------GD-----LDTFAYSSMINGLCREGR 444
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+ V M GC+ + ++ RA K F +++ G P + +
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504
Query: 613 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCN 672
++ + +A AL+ M + + ++ L KL+ LN C
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG---LCQGKKLDMALNLWCQAL 561
Query: 673 AASSEITVSNLSRALHALCRSEKERD 698
+ V + +H LC S K D
Sbjct: 562 EKGFKPDVKMHNIIIHGLCSSGKVED 587
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 138/360 (38%), Gaps = 37/360 (10%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+++ +L PH AL IF+ + +H + L L+ + +++E +R
Sbjct: 12 RVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRT 71
Query: 293 KPSK-------RIKNMHRKNWDP--------------VLEPDLVVYNAVLNACVPSHQWK 331
+ K + + KN P +P + YN++LNA + S++W
Sbjct: 72 QKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWD 131
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
F GL P+ TY + +++ + ++D E M + G + +Y L+
Sbjct: 132 EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLI 191
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ + G +++A+ M +RGV + Y L G +A + E++
Sbjct: 192 NSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSV 251
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P ++ +I G D+ I+ MK K D+++ + +
Sbjct: 252 YPNIPSYNVMINGLCKCGKFDESFEIWHRMK--------------KNERGQDLYTYSTLI 297
Query: 512 FEETTRANSSGYTFLSGDGAP--LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
N G T + + A + PD Y++ML A + E ++K M GC+
Sbjct: 298 HGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR 357
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 136/340 (40%), Gaps = 35/340 (10%)
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTL 274
++ + +K ++ Y L+ L + + EA+ I+ L+ E DC D Y + L
Sbjct: 347 LWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDC--CADSMTYGVLVHGL 404
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G L + + ++E + D Y++++N + V
Sbjct: 405 CKNGYLNKALSILEEAENGRG---------------DLDTFAYSSMINGLCREGRLDEVA 449
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
V Q+ K G KP+ + +++ K + FF M G +TY L+
Sbjct: 450 GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 509
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ + +EA A V+ M +G Y L LC G+ D L + + KP
Sbjct: 510 SKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC-QGKKLDMALNLWCQALEKGFKP- 567
Query: 455 EITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
++ +II + G ++D + ++ MK C PN+ T N +++ + + F +A +++
Sbjct: 568 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIW 627
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ + +PD +Y+ L+ + H+
Sbjct: 628 DHILQYGP-------------QPDIISYNITLKGLCSCHR 654
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 91/222 (40%), Gaps = 21/222 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G +A+S+L+ ++ R F Y+ ++ L + GR E + + M
Sbjct: 400 LVHGLCKNGYLNKALSILEEA---ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 456
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P + ++V + L++ ++ M K P +
Sbjct: 457 KHGCKPNPHVC--NAVINGFVRASKLEDALRFFGNMVSKGCF---------------PTV 499
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN ++N + ++ + + K++ G KP+ TY L M + Q K D+ + +
Sbjct: 500 VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 559
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ G + +++ GK+ +A+ M+QR V
Sbjct: 560 ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV 601
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 111/261 (42%), Gaps = 30/261 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-N 252
++ GL +G + VLD + +G K + V ++ +A + +ALR F N
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCK-----PNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---------------- 296
++ + C +P + Y+++ L + E L++ M K K
Sbjct: 490 MVSKGC--FPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 297 RIKNMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ +M W LE PD+ ++N +++ S + + ++ ++++ P+ T+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
ME + ++ + + + + G ++Y + ++ +I++AV + +
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 667
Query: 413 RGVVGTASVYYELACCLCNNG 433
RGV+ TA + L + +NG
Sbjct: 668 RGVLPTAITWNILVRAVLDNG 688
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 169/409 (41%), Gaps = 32/409 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ L + GR EA+ + + M+ED L P+ Y ++ + ++G + L+ +M
Sbjct: 180 FTTLMNGLCREGRVVEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 238
Query: 291 ----RQKPSKRI-----------------KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
R KP+ I +N+ + + + P+L YN ++N S +
Sbjct: 239 EEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGR 298
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
W + +++ + + P T+ + + +++ GK+ E + +M G +TY
Sbjct: 299 WSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNS 358
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
++ F ++ +++ A M +G + L C R D M ++ ++ S R
Sbjct: 359 MIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM-SRR 417
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 508
IT+T LI G+++ + + Q M PN+ T N +L N A
Sbjct: 418 GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477
Query: 509 KELFEETTRAN---SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
E+F+ ++ + + F ++PD TY+ ++ ++ E +Y+ M
Sbjct: 478 LEMFKVMQKSKMDLDASHPF-----NDVEPDVQTYNILICGLINEGKFSEAEELYEEMPH 532
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
G D + ++ + + FDS+ G P + FT ++
Sbjct: 533 RGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 134/321 (41%), Gaps = 29/321 (9%)
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+L+ ++ RM ++P I ++HRK + ++ + ++ + F ++
Sbjct: 81 KLLGVVVRM-ERPDVVI-SLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKIT 138
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
K G PS T+ + + + FF ++ K + + L+ EG++
Sbjct: 139 KLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPN----VIAFTTLMNGLCREGRVV 194
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
EAVA + M + G+ Y + +C G A+ ++ K++ + KP + ++ +
Sbjct: 195 EAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAI 254
Query: 462 IISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA----KELFEETT 516
I G D ++F M++ PN+ T N M+ + + +S+A +E+FE
Sbjct: 255 IDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKM 314
Query: 517 RANSSGYTF----------------LSGDGAP--LKPDEYTYSSMLEASATAHQWEYFEY 558
+ ++ L + P + P+ TY+SM++ + ++ + E
Sbjct: 315 SPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAER 374
Query: 559 VYKGMALSGCQLDQTKHAWLL 579
++ MA GC D + L+
Sbjct: 375 MFYLMATKGCSPDVITFSILI 395
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ + G + AL + M+ + P++ +++ L G LK+ +++ + M
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISS-GVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK + H N +EPD+ YN ++ + ++ +++++ GL P
Sbjct: 485 -QKSKMDLDASHPFND---VEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTI 540
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ + + + D + F M G + +T+ L+ + + G++ + + M
Sbjct: 541 TYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEM 600
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+RG+V A Y L C G A+ + +++ S
Sbjct: 601 GRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMIS 637
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 100/266 (37%), Gaps = 28/266 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ GL+ L+ G G+ A LD + +
Sbjct: 393 ILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA---LDLLQEM 449
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED----------CNLYPDIAAYHS 269
+ LL L G+ +AL +F +M + ++ PD+ Y+
Sbjct: 450 ISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNI 509
Query: 270 VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
+ L G E +L E M HR L PD + YN+V++ +
Sbjct: 510 LICGLINEGKFSEAEELYEEMP----------HRG-----LVPDTITYNSVIDGLCKQSR 554
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+F + G P T+ + + G+ E F +M + G A+TY+
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGV 415
L+ F + G IN A+ + M GV
Sbjct: 615 LIHGFCQVGNINGALDIFQEMISSGV 640
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 153/393 (38%), Gaps = 37/393 (9%)
Query: 328 HQWKGV---FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
H+ KG+ +F + +S P + + V+++ + D+V RKM
Sbjct: 52 HEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNI 111
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
++ +L++ F K+ A++ + + G + + L LC R +A+ +
Sbjct: 112 YSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ 171
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN---IGT-VNAMLKVY 499
I KP I FT L+ G + + +++ M +D +PN GT V+ M K+
Sbjct: 172 I-----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 226
Query: 500 SRNDMFSKAKELFEETTRANSSGYTF------LSGDG--------------APLKPDEYT 539
+ +++ EE +R + + L DG + P+ +T
Sbjct: 227 DTVSALNLLRKM-EEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
Y+ M+ ++ +W + + + M D + L+ + GK E ++ +L
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEML 345
Query: 600 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRD 659
G IP+ + + M+ Q+ + A + MA ++ L + D
Sbjct: 346 PRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVD 405
Query: 660 KLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
KLL+ + ++ IT + L +H C+
Sbjct: 406 DGMKLLHEMSRRGLVANTITYTTL---IHGFCQ 435
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 165/401 (41%), Gaps = 47/401 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G+ +G +A+ + D + G + D+ + Y L+ L K G A+R+ M+
Sbjct: 137 LIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT---YGTLINGLCKVGNTSAAIRLLGSMV 193
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N P++ AY+++ +L + + E L M K + PD+
Sbjct: 194 QK-NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG---------------ISPDIF 237
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN++++A +WK V + ++ S + P ++ ++ + + GK H+ KM
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 297
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +TY L+ +++EAV M +G + Y L C R
Sbjct: 298 IQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRI 357
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNA 494
AM + ++ + P +T++ LI + D I++F M + PN+ T
Sbjct: 358 DKAMYLFGEM-CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 416
Query: 495 MLKVYSRNDMFSKAKELFEETTRAN----------------SSG--------YTFLSGDG 530
+L +N ++A L + +N +G ++ LS G
Sbjct: 417 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 476
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
L+PD +TYS M+ + +++ M +GC L+
Sbjct: 477 --LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 515
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/394 (19%), Positives = 138/394 (35%), Gaps = 53/394 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P V +N +L + + + Q+ G+ P+ T + + +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G T+ L+R + EGKI EA+ M G Y L LC
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
G A+ ++ SM ++ +C+PN+
Sbjct: 179 VGNTSAAI---------------------RLLGSM--------------VQKNCQPNVFA 203
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ ++ ++A LF E S PD +TY+S++ A
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGIS-------------PDIFTYNSLIHALCNLC 250
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+W++ + M S D ++ + GK D +++ G P+ + +T
Sbjct: 251 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYT 310
Query: 612 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR-DKLEKLLNALCN 670
++ + S ++AV + + M + L + +I R DK L +C
Sbjct: 311 ALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI-NGYCKIQRIDKAMYLFGEMCR 369
Query: 671 CNAASSEITVSNLSRALHALCRSEKERDLSSSAH 704
+T S L +H LC E+ +D + H
Sbjct: 370 QELIPDTVTYSTL---IHGLCHVERLQDAIALFH 400
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 112/276 (40%), Gaps = 32/276 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG-L 219
+VD++ +R + + +M+ L+ + +K+ + KG +S + G
Sbjct: 293 VVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 352
Query: 220 KDKRDLKSRFV---------------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
K +R K+ ++ Y+ L+ L R +A+ +F+ M+ C+ P++
Sbjct: 353 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA-CSQIPNL 411
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y LL L K R + +K + N DP D+ V N ++
Sbjct: 412 VTYRI---------LLDYLCK--NRYLAEAMALLKAIEGSNLDP----DIQVNNIAIDGM 456
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + + +F L GL+P TY + + + + G D + FR+M ++G +
Sbjct: 457 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 516
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
Y + R F + + A+ ++ M RG AS
Sbjct: 517 CIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAS 552
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 95/276 (34%), Gaps = 58/276 (21%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD + ++ + +F ++ G +P TYG + + + G
Sbjct: 128 QPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 187
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
M + Y ++ + ++ ++ EA M +G+ Y L LC
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247
Query: 431 NNGRWQ-------------------------DAML----------VVEKIKSLRHSKPLE 455
N W+ DA+ VV+K+ R +P
Sbjct: 248 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ-RGVEPNV 306
Query: 456 ITFTGLIISSMDG----GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
+T+T L MDG +D+ + +F M C PN+ + N ++ Y + KA
Sbjct: 307 VTYTAL----MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 362
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
LF E R L PD TYS+++
Sbjct: 363 LFGEMCRQE-------------LIPDTVTYSTLIHG 385
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/400 (16%), Positives = 154/400 (38%), Gaps = 27/400 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P++ + ++N+ ++ F V ++ K G +P AT+ + + GK
Sbjct: 92 IPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEAL 151
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F KM G +TY L+ + G + A+ + +M Q+ Y + L
Sbjct: 152 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C + + +A + ++ + + P T+ LI + + ++ M D P+
Sbjct: 212 CKDRQVTEAFNLFSEMVT-KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + N ++ + ++A ++ ++ + ++P+ TY+++++
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRG-------------VEPNVVTYTALMDGHC 317
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + V+ M GC + + L+ + + + F + IP +
Sbjct: 318 LLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 377
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYA---PFHITERQWTELFESNEDRISRDKLEKLL 665
++ ++ + A+AL + M P +T R + N L K +
Sbjct: 378 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 437
Query: 666 NALCNCNAASSEITVSNLSRALHALCRS---EKERDLSSS 702
+ +I V+N+ A+ +CR+ E RDL S+
Sbjct: 438 EG----SNLDPDIQVNNI--AIDGMCRAGELEAARDLFSN 471
>gi|242032435|ref|XP_002463612.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
gi|241917466|gb|EER90610.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
Length = 638
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 141/371 (38%), Gaps = 37/371 (9%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
R + P + PDL YN +L A + + + ++G+ P +Y ++ +
Sbjct: 10 RHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLRTMLEAGVSPDTVSYRYIVDAFASA 69
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G V E F +MA G A Y L+ A G EAVA +R M+ G TA+ Y
Sbjct: 70 GNLSRVAELFSEMAVMGNTADASAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATY 129
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHM 481
L GR+ V E + +R + P + T+ L DGG + + +F M
Sbjct: 130 RVLLDLYGRQGRFDG---VRELFREMRTAVPPDTATYNVLFRVYGDGGFFKEVVELFHDM 186
Query: 482 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
+ EP++ T ++ R + A+E+ E TR + P Y
Sbjct: 187 LETGVEPDMVTCENVMAACGRGGLHEDAREVLEYMTREG-------------MVPTADAY 233
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ ++EA A +E + M G + L +R G L +
Sbjct: 234 TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNTLAFAYARGG-----------LFQ 282
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDK 660
E F+ M A +Q N + ALI AY + E + R + D+
Sbjct: 283 EAEA----IFSRMSNNAGIQKNKDSFDALIE--AYCQGAQLDDAVKAYMEMRKSRFNPDE 336
Query: 661 --LEKLLNALC 669
LE +LNA C
Sbjct: 337 RSLEGVLNAYC 347
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 137/343 (39%), Gaps = 36/343 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR +F M + PD A Y+ + G G KE+V+L
Sbjct: 128 TYRVLLDLYGRQGRFDGVRELFREM--RTAVPPDTATYNVLFRVYGDGGFFKEVVELFHD 185
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + +EPD+V V+ AC + V + + + G+ P+A
Sbjct: 186 MLETG---------------VEPDMVTCENVMAACGRGGLHEDAREVLEYMTREGMVPTA 230
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E + + Y+ + F M + G TY L A+ G EA A
Sbjct: 231 DAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNTLAFAYARGGLFQEAEAIFSR 290
Query: 410 MEQR-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M G+ + L C + DA+ +++ R + P E + G++ +
Sbjct: 291 MSNNAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFN-PDERSLEGVLNAYCIA 349
Query: 469 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTF 525
G ID+ F+ ++ P+I ML +Y+RND ++ A ++ EE T RA+S+
Sbjct: 350 GVIDESKEQFEELQSSVTLPSIIAYCMMLSLYARNDRWADAYDMLEEMKTNRASSTHQVI 409
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
A L EY SS W+ EY + + GC
Sbjct: 410 -----ASLIKGEYDDSS---------NWQMVEYALENSTMEGC 438
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/446 (19%), Positives = 175/446 (39%), Gaps = 69/446 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
L+K K + +A +L+W++G D+ F Y L+ L K G +AL++F+ M
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSPDV---FSYGTLINSLAKNGYMSDALKLFDEMP 186
Query: 255 ----------------------------------LEDCNLYPDIAAYHSVAVTLGQVGLL 280
L+ ++YP+I +Y+ + L + G
Sbjct: 187 ERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKF 246
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E ++ RM++ + DL Y+ +++ S G V+K++
Sbjct: 247 DESFEIWHRMKKNERGQ---------------DLYTYSTLIHGLCGSGNLDGATRVYKEM 291
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
++G+ P Y + L++G+ + E ++ M K G ++Y +L+R +E K+
Sbjct: 292 AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKV 350
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+EA++ + ++ + Y L LC NG A+ ++E+ ++ R ++
Sbjct: 351 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD-TFAYSS 409
Query: 461 LIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+I G +D+ + M H C+PN NA++ + R A F
Sbjct: 410 MINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKG 469
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
P TY++++ + A ++ + K M G + + ++ L+
Sbjct: 470 CF-------------PTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLM 516
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIP 605
+ K + + + LE G P
Sbjct: 517 NGLCQGKKLDMALNLWCQALEKGFKP 542
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 139/340 (40%), Gaps = 35/340 (10%)
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTL 274
++ + +K ++ Y L+ L + + EA+ I+ L+ E DC D Y + L
Sbjct: 322 LWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCC--ADSMTYGVLVHGL 379
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G L + + ++E + D Y++++N + V
Sbjct: 380 CKNGYLNKALSILEEAENGRG---------------DLDTFAYSSMINGLCREGRLDEVA 424
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
V Q+ K G KP+ + +++ K + FF M G +TY L+
Sbjct: 425 GVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 484
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ + +EA A V+ M Q+G Y L LC G+ D L + + KP
Sbjct: 485 SKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLC-QGKKLDMALNLWCQALEKGFKP- 542
Query: 455 EITFTGLIISSM-DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
++ +II + G ++D + ++ MK +C PN+ T N +++ + + F +A +++
Sbjct: 543 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIW 602
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ + L+PD +Y+ L+ + H+
Sbjct: 603 DHILQYG-------------LQPDIISYNITLKGLCSCHR 629
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 132/344 (38%), Gaps = 30/344 (8%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV--KLIERM 290
+++ +L PH AL IF + +P Y + LK L KL+
Sbjct: 12 RVIKLLKSEKNPHSALSIF----DSVTRFP---GYSHTPYVFHHI--LKRLFDPKLVAHA 62
Query: 291 RQK---PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
K P + + R + +P + YN++LNA + S++W F GL P
Sbjct: 63 YAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSP 122
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + +++ + ++D E M G + +Y L+ + + G +++A+
Sbjct: 123 NLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLF 182
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M +RGV + Y L G +A + E++ P ++ +I
Sbjct: 183 DEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCK 242
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G D+ I+ MK K D+++ + + N G T +
Sbjct: 243 CGKFDESFEIWHRMK--------------KNERGQDLYTYSTLIHGLCGSGNLDGATRVY 288
Query: 528 GDGAP--LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+ A + PD Y++ML A + E ++K M GC+
Sbjct: 289 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR 332
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 92/222 (41%), Gaps = 21/222 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G +A+S+L+ ++ R F Y+ ++ L + GR E + + M
Sbjct: 375 LVHGLCKNGYLNKALSILEEA---ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 431
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P+ ++V + L++ ++ M K P +
Sbjct: 432 KHGCK--PNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCF---------------PTV 474
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN ++N + ++ + + K++ + G KP+ TY L M + Q K D+ + +
Sbjct: 475 VTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 534
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ G + +++ GK+ +A+ M+QR V
Sbjct: 535 ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCV 576
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 30/276 (10%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
+A + EA+ FN+M E +L P++ A++ + L + +++ ++ E MR +
Sbjct: 144 ARAQKVDEAIYAFNVM-EKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRDR----- 197
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
PD Y+ +L VF+++ +G P TY + +++
Sbjct: 198 -----------FTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDI 246
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ ++G+ D R M S Y VLV + E ++ EAV ME+ G+
Sbjct: 247 LCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKAD 306
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKS---LRHSKPLEITFTGLIISSMDGGHIDDCI 475
+V+ L C R ++ V++++KS +SK I LI D G D+
Sbjct: 307 VAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLI----DRGEKDEAF 362
Query: 476 SIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
+F+ M CEP+ T M+K MF + KE+
Sbjct: 363 DVFRKMIKVCEPDADTYTMMIK------MFCEKKEM 392
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 20/250 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+G G + + +A V + D L Y+ ++ IL KAGR EAL I M
Sbjct: 208 LLEGWGKEPNLPKAREVFR---EMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSM- 263
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P Y + T G L+E V M + K D+
Sbjct: 264 DPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMK---------------ADVA 308
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
V+N+++ A +++ K V+ V K+++ G+ P++ + + + ++ G+ D + FRKM
Sbjct: 309 VFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKM 368
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K E A TY ++++ F E+ ++ A + M ++GV + + L LC
Sbjct: 369 IKVCEP-DADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNT 427
Query: 436 QDAMLVVEKI 445
Q A +++E++
Sbjct: 428 QKACVLLEEM 437
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 86/199 (43%), Gaps = 17/199 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F+Y+ L+ G R EA+ F L +E + D+A ++S+ + +K + ++
Sbjct: 271 TTFIYSVLVHTYGTETRLEEAVDTF-LEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRV 329
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++ M+ K + P+ N +L + + F VF+++ K +
Sbjct: 330 LKEMKSKG---------------VTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKV-CE 373
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P A TY + +++ + + + + ++ M K G T+ VL+ EE +A
Sbjct: 374 PDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVL 433
Query: 407 VRNMEQRGVVGTASVYYEL 425
+ M + G+ + + + L
Sbjct: 434 LEEMIEMGIRPSGATFGRL 452
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 53/253 (20%)
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
S Y + +E + +Y L+ + M K + + T+ +++R + K++EA+ A
Sbjct: 98 SVRAYHMMIESTAKIRQYKLMWDLINAMMKK-KMLNVETFCIVMRKYARAQKVDEAIYAF 156
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
ME+ Y+L P + F GL+ +
Sbjct: 157 NVMEK----------YDLP--------------------------PNLVAFNGLLSALCK 180
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
++ IF++M+D P+ T + +L+ + + KA+E+F E A S
Sbjct: 181 SKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSL------ 234
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
PD TYS M++ A + + + + M S C+ ++ L+ G
Sbjct: 235 -------PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV---HTYGT 284
Query: 588 CHLLEHAFDSLLE 600
LE A D+ LE
Sbjct: 285 ETRLEEAVDTFLE 297
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 169/434 (38%), Gaps = 43/434 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVK 285
+ LL +A R EAL I + PD+ +Y + +L G+ G +L++
Sbjct: 147 IIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ V PD+V YN V++ +FK++ + G+
Sbjct: 207 MMAE----------------GGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 250
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P TY + + ++ D F R+M G TY L+ + G+ EAV
Sbjct: 251 PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVR 310
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M ++ ++ + L LC G+ ++A V + + +++ P ++ ++
Sbjct: 311 VFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNGY 369
Query: 466 MDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANS 520
G + D +F M D P I T N ++K Y+ M KA +F E + N
Sbjct: 370 ATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNV 429
Query: 521 SGYTFLSG--------DGA----------PLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
YT + D A + PD+Y Y +++ T + +
Sbjct: 430 LTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISE 489
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ +G LD + ++ + G+ ++ FD + G P + ++ ++ +
Sbjct: 490 IMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGK 549
Query: 623 YEKAVALINAMAYA 636
EKA+ + +AM A
Sbjct: 550 MEKALRVFDAMVSA 563
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 120/601 (19%), Positives = 232/601 (38%), Gaps = 70/601 (11%)
Query: 93 FRQLASESKEFAGDNLKRENLRELKEMFEKDL---NWVLDD-----DVQLGSDYFAKNVE 144
+ L + K D+L R + E + D+ N V+D DV D F + V+
Sbjct: 189 LKSLCDQGKSGQADDLLRM-MAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247
Query: 145 WHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKG 204
+ + + + L R M K F+R M G++ L+ G G
Sbjct: 248 RGIPPDFVTYSSVVHALC---KARAMD-KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPD 263
W++A+ V ++ + L + L+ L K G+ EA +F+ M ++ N PD
Sbjct: 304 QWKEAVRVFKE---MRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQN--PD 358
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ +Y+ + G L ++ L + M + P + +N ++ A
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDG---------------IAPVICTFNVLIKA 403
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
+F ++R G+KP+ TY + + + GK D E F +M G A
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
Y L++ F G + +A + + G+ ++ + LC GR DA + +
Sbjct: 464 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFD 523
Query: 444 KIKSLRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHM-KDHCEPN---IGT-VNA 494
++ P + ++ L MDG G ++ + +F M EPN GT VN
Sbjct: 524 LTVNV-GLHPTAVVYSML----MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNG 578
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYT------FLSGDGAPLKP------------D 536
K+ ++ S +E+ ++ + ++ Y F +G P K +
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 638
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
+ TYS +L ++ +++K + ++D ++ + + + F
Sbjct: 639 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFA 698
Query: 597 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT----ELFESN 652
S+ +G +P + ++ M+ I + E+A + ++M A R EL + N
Sbjct: 699 SISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKN 758
Query: 653 E 653
E
Sbjct: 759 E 759
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 167/414 (40%), Gaps = 58/414 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K + G +AM + + ++D + YT ++A L + G+ +A+ FN M+
Sbjct: 400 LIKAYANCGMLDKAMIIFNE---MRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D + PD AYH + G L + +LI + MH D+V
Sbjct: 457 -DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN------GMHL---------DIV 500
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
++++++N + +F GL P+A Y + M+ GK + F M
Sbjct: 501 LFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G + Y LV + + G+I+E ++ R M Q+G+ + +Y + +G +
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII-----DGLF 615
Query: 436 QDAMLVVEKIKSLRHSKPL----EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 490
+ V K+K ++ + T++ ++ D+ I +F+ ++ + + +I
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 675
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T+N M+ + +AK+LF +R+ L P TYS M+
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLFASISRSG-------------LVPCVVTYSIMITNLIKE 722
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
E E ++ M +GC+ D LL H LL+ EI
Sbjct: 723 GLVEEAEDMFSSMQNAGCEPDS----------------RLLNHVVRELLKKNEI 760
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 136/378 (35%), Gaps = 90/378 (23%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK---------------- 346
R VL P Y +++ C +H+ + F QL ++GL+
Sbjct: 100 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEA 159
Query: 347 --------------------PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG--A 384
P +Y + ++ + GK + R MA+ G
Sbjct: 160 KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDV 219
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC-------------- 430
+ Y ++ F++EG +N+A + M QRG+ Y + LC
Sbjct: 220 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQ 279
Query: 431 --------NN-------------GRWQDAMLVVEKIKSLRHSK-PLEITFTGLIISSMDG 468
NN G+W++A+ V ++++ R S P +TF L+ S
Sbjct: 280 MVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR--RQSILPDVVTFNMLMGSLCKY 337
Query: 469 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G I + +F M + P++ + N ML Y+ +LF+ +
Sbjct: 338 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD-----------LML 386
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
GDG + P T++ +++A A + ++ M G + + + ++ R GK
Sbjct: 387 GDG--IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGK 444
Query: 588 CHLLEHAFDSLLEAGEIP 605
F+ +++ G P
Sbjct: 445 MDDAMEKFNQMIDQGVAP 462
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 61/324 (18%), Positives = 124/324 (38%), Gaps = 25/324 (7%)
Query: 303 RKNWDPVLEPDLVVYNAVLN------ACVPSHQWKGVFWVFKQLRKSG---LKPSAATYG 353
++ PVLE DL + A + AC + R G L P++ TY
Sbjct: 56 QRRGTPVLERDLNGFLAAIARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYA 115
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV-AAVRNMEQ 412
+ M+ ++ + +L FF ++ ++G + + L++ F E + +EA+ + +
Sbjct: 116 ILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPE 175
Query: 413 RGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
G V Y L LC+ G+ Q L+ + P + + +I G +
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDV 235
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ +F+ M + P+ T ++++ + KA+ +
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG----------- 284
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ P+ +TY++++ ++ QW+ V+K M D L+ + GK
Sbjct: 285 --VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKE 342
Query: 591 LEHAFDSLLEAGEIPHPLFFTEML 614
FD++ G+ P + ML
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIML 366
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 137/332 (41%), Gaps = 23/332 (6%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D + P++ YNA+++ + ++ +FK++ GL+P+ TY + + + + G +
Sbjct: 354 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 413
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F KM G + Y L+ + ++G ++ A + M + G+ TA+ Y L
Sbjct: 414 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 473
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
LC NG M + ++ R TFT LI +D+ +F M D +
Sbjct: 474 AGLCRNGDLSSCMELHREMAE-RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 532
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PN T N M++ Y KA +L+++ LKPD YTY S++
Sbjct: 533 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG-------------LKPDNYTYRSLIS 579
Query: 546 A----SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
S + E+ + A+ L+ LL R G+ H +D +
Sbjct: 580 GLCLTSGVSKANEFVADLENSYAV----LNNFSLTALLYGFFREGRFTETYHLWDEMAVR 635
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G + FT ++ A+ Q + EK+ L M
Sbjct: 636 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 667
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 98/501 (19%), Positives = 187/501 (37%), Gaps = 42/501 (8%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
A L+D+L + E + + M GL E L+ L +G A+ + D
Sbjct: 363 AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD-- 420
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
++DK + + Y L+ K G A + + M+++ L P A+Y + L +
Sbjct: 421 -KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE-GLTPTAASYSPLIAGLCR 478
Query: 277 VGLLKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVV 316
G L ++L M + K + K D + P+ V
Sbjct: 479 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 538
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+N ++ + F ++ Q+ + GLKP TY + + + +EF +
Sbjct: 539 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 598
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRW 435
S + + L+ F+ EG+ E M RGV + S + L + +
Sbjct: 599 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 658
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
+ +L E + + KP +I +T +I + ++ ++ + M D PN T
Sbjct: 659 KSCVLFREMKE--QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 716
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ ++ A+ L +E N + P+++TY+ L+ AT E
Sbjct: 717 LINNLCKSGYLGSAELLCKEMLAGN-------------VLPNKFTYNCFLDYFATEGDME 763
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ ++ M L G L+ +AGK + E+G P + ++ ++
Sbjct: 764 KAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 822
Query: 615 IQAIVQSNYEKAVALINAMAY 635
+ + KA L N M Y
Sbjct: 823 HELCKMGDINKAFELWNEMLY 843
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 148/402 (36%), Gaps = 53/402 (13%)
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S +T+ Q + L L+ ++RQ R ++ K + D VY A + A S
Sbjct: 179 SSGITVNQYTASQILFSLV-KIRQFALAR--DLFDKMLQSGVHLDEYVYTAGIRAYCESR 235
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
G + ++ G+K SA Y + M + ++ + E M G +TY+
Sbjct: 236 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 295
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY----------------YELAC----- 427
LV F ++ A+ +M + G V + + + LAC
Sbjct: 296 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 355
Query: 428 --------------CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
LC N R+ DA + +++ R +P E+T+ LI + G I+D
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAG-RGLEPNEVTYAILIHALCKRGMIED 414
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ +F M+D + + N+++ Y + +A+ L +
Sbjct: 415 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG------------- 461
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
L P +YS ++ +++ MA G + L+ + K
Sbjct: 462 LTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAA 521
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
FD ++++ IP+ + F M+ + N KA L + M
Sbjct: 522 RLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 563
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/373 (18%), Positives = 137/373 (36%), Gaps = 50/373 (13%)
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
SG+ + T + +++ ++ L + F KM +SG + Y +RA+ E ++
Sbjct: 180 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 239
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A V ME GV +A Y L LC N R Q+A+ V + ++ + E+T+ L+
Sbjct: 240 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTAD-EVTYRTLV 298
Query: 463 ISSMDGGHIDDCISIFQHM--------KDHCE---------------------------- 486
++ + I M + +C
Sbjct: 299 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 358
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ NA++ +N+ F A LF+E ++G G L+P+E TY+ ++ A
Sbjct: 359 PNVFAYNALIDKLCKNERFDDADRLFKE-----------MAGRG--LEPNEVTYAILIHA 405
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
E ++ M G ++ + L+ + G +++ G P
Sbjct: 406 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 465
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLN 666
++ ++ + + L MA +T L D+ +L +
Sbjct: 466 AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 525
Query: 667 ALCNCNAASSEIT 679
+ + N +E+T
Sbjct: 526 KMIDSNVIPNEVT 538
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 140/337 (41%), Gaps = 19/337 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V +N +L+A V ++ V + K++ G++ T+ + + + L
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K G +T LV F ++++AV+ V M + G Y + LC
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
R DA ++I+ + +P +T+T L+ + D + M K PN+
Sbjct: 203 TKRVNDAFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T +A+L + +N +AKELFEE R + + PD TYSS++
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMS-------------IDPDIVTYSSLINGLCLH 308
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ + ++ M GC D + L+ +A + F + + G + + + +
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 611 TEMLIQAIVQS-NYEKAVALINAMAYAPFHITERQWT 646
LIQ Q+ + +KA + M + F I+ WT
Sbjct: 369 NT-LIQGFFQAGDVDKAQEFFSQMDF--FGISPDIWT 402
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 130/348 (37%), Gaps = 40/348 (11%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +A+ + + M+E PDI AY+++ +L + + + + + +K
Sbjct: 170 RVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-------- 220
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
+ P++V Y A++N S +W + + K + P+ TY ++ +++
Sbjct: 221 -------IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
GK E F +M + +TY L+ +I+EA M +G + Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
L C R +D M + ++ S R +T+ LI G +D F M
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 483 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE----------------------TTRAN 519
P+I T N +L N KA +FE+ T +
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+ F S LKPD TY++M+ T E +Y M G
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 124/305 (40%), Gaps = 15/305 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD+V YNA++++ + + F FK++ + G++P+ TY + + S ++
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
M K +TY L+ AF + GK+ EA M + + Y L LC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
+ R +A + + + S + +++ LI ++D + +F+ M N
Sbjct: 307 LHDRIDEANQMFDLMVS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N +++ + + KA+E F + D + PD +TY+ +L
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQM-------------DFFGISPDIWTYNILLGGLCD 412
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ E +++ M LD + ++ + GK F SL G P +
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 610 FTEML 614
+T M+
Sbjct: 473 YTTMM 477
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD+ YN +L + + + +F+ ++K + TY + M ++GK +
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
F ++ G +TY ++ +G ++E A M+Q G++
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 144/356 (40%), Gaps = 62/356 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y +++ I GKAG P +A ++ M P+I + ++ + GL +E + ++
Sbjct: 211 TYNRMIVIYGKAGEPSKAEMLYRSM-RRAMCPPNICTFTALMNAFARQGLYREAERYFDK 269
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+++ K PD YNA++ A G +F+ ++++G P
Sbjct: 270 LQEFDYK---------------PDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDT 314
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
++ + + ++G Y+ + F+ M +G + + +L+ A+ G++ EA V
Sbjct: 315 VSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSA 374
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME+ G +Y L +GR +D +E ++ SS
Sbjct: 375 MERDGTKPDTLIYNALINAYGVSGRHED----------------MEALLAKMVKSS---- 414
Query: 470 HIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+P+IGT N +++VY++ KA+ELF+ R
Sbjct: 415 ------------SKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLK---------- 452
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
L PD T+++++ A + + K M SGC+ D A +L A R+
Sbjct: 453 ---LVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVT-ARVLFSACRS 504
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 131/327 (40%), Gaps = 52/327 (15%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
PDL YN +++A S + F +++++ P+ T+G+ + +G ++
Sbjct: 99 AFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKA 158
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
E F +M K G + G L + + + A A R++E+ YE
Sbjct: 159 EELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEK----------YE---- 204
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
+P T+ +I+ G +++ M + C P
Sbjct: 205 ----------------------CEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPP 242
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
NI T A++ ++R ++ +A+ F++ + KPD Y Y++++EA
Sbjct: 243 NICTFTALMNAFARQGLYREAERYFDKLQEFD-------------YKPDHYAYNALMEAY 289
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ +++ M +GC D H L+ RAG E F S+ AG P+
Sbjct: 290 SQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPN- 348
Query: 608 LFFTEMLIQAIVQSN-YEKAVALINAM 633
L +L+ A ++ E+A L++AM
Sbjct: 349 LKSNMLLLSAYARAGRVEEAEELVSAM 375
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 104/263 (39%), Gaps = 16/263 (6%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
++ + A L++ S+ A + + M ++G L+ G G + A
Sbjct: 275 YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAE 334
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+ + +LKS + LL+ +AGR EA + + M D PD Y+++
Sbjct: 335 KIFKSMQSAGFSPNLKSNML---LLSAYARAGRVEEAEELVSAMERD-GTKPDTLIYNAL 390
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
G G +++ L+ +M + SK+ K PD+ YN ++ +
Sbjct: 391 INAYGVSGRHEDMEALLAKMVKSSSKQTK------------PDIGTYNTLIQVYAQAGFI 438
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+F+ L + L P A T+ M + Y +KM +SG A+T +VL
Sbjct: 439 PKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVL 498
Query: 391 VRAFWEEGKINEAVAAVRNMEQR 413
A ++ + + +++ R
Sbjct: 499 FSACRSPEQVEQVTQLMESLQGR 521
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 182/458 (39%), Gaps = 41/458 (8%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
P R + LV + R + + + VR M G+ L+ G + G
Sbjct: 215 PADGCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRV 274
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIA 265
+A +LD +K+K S Y L+ + + +A R+ + L + +L+P +
Sbjct: 275 EEAFRMLD---KMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHP--S 329
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIKNMHRKNWDPVLE-- 311
A H++ L + + KE V+ +RM + S +K + + +L+
Sbjct: 330 ACHTMLYCLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSF 389
Query: 312 ------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
P VY V+ + + + + GL S +Y + ++ +++G
Sbjct: 390 IKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAV 449
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
D E ++M G +T+ L+ + + G ++ A ++ + + G + + L
Sbjct: 450 DKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSL 509
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DH 484
LCN + DA + E++ +P T+ L+ + GH++ I + MK D
Sbjct: 510 IDGLCNTHQLDDAFVCFEEMAEW-GVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDG 568
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
P+ + NA++ + R KA+++F + R + PD YTY+S++
Sbjct: 569 VTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFG-------------VVPDSYTYNSLI 615
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+A + + + SGC + W +V A
Sbjct: 616 KALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAA 653
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 7/190 (3%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
VF Q+ + GL+PS A Y + +++G D + F++M G TY LV
Sbjct: 175 VFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVC 234
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G ++EAV VR ME G+ Y L CN GR ++A +++K+K + P E
Sbjct: 235 RRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKE-KGVAPSE 293
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI--GTVNAMLKVYSRNDMFSKAKELFE 513
T+ L+ D + H E ++ + ML S+ DM AKE E
Sbjct: 294 ATYRTLVHGVFRCLERDKAYRMLSDWLGH-ETSLHPSACHTMLYCLSKKDM---AKEAVE 349
Query: 514 ETTRANSSGY 523
R ++ GY
Sbjct: 350 FAKRMSARGY 359
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P VYNA++ A V + + F+Q+ G +P TY + + + G D
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAV 243
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
R+M G TY +LV F G++ EA + M+++GV + + Y L
Sbjct: 244 RLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTL 299
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 99/512 (19%), Positives = 188/512 (36%), Gaps = 71/512 (13%)
Query: 159 RVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV-- 216
R LV L R + + V + G +E + L++ G G R A V +
Sbjct: 122 RALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPR 181
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
GL+ S VY L+A +AG A F M D PD Y+S+ + +
Sbjct: 182 LGLR-----PSTAVYNALIAASVRAGAVDTAYLRFQQMPAD-GCRPDRFTYNSLVHGVCR 235
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G++ E V+L+ +M + + P++ Y +++ + + + F +
Sbjct: 236 RGIVDEAVRLVRQMEGEG---------------IRPNVFTYTMLVDGFCNAGRVEEAFRM 280
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
++++ G+ PS ATY + + + + D + ++ ++ +
Sbjct: 281 LDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSK 340
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACC---------LC-------NNGRWQDAML 440
+ EAV + M RG + ++ + + C LC NG +
Sbjct: 341 KDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDV 400
Query: 441 VVEKIKSLRHSKPLE--------ITFTGLIISSMDGGHIDDCI----------SIFQHMK 482
+ IKSL + K + GL+ S M + DC I + M+
Sbjct: 401 YIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQ 460
Query: 483 DHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
D PN+ T N ++ YS+ AK + + + F+ PD T++
Sbjct: 461 DKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLME-----HGFM--------PDIITFT 507
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
S+++ HQ + ++ MA G + + + L+ AG + + +
Sbjct: 508 SLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKID 567
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G P F +++ +KA + N M
Sbjct: 568 GVTPDAYSFNALILSFCRMRKVDKAEDIFNDM 599
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++DK L + + L++ K G H A + +++E PDI + S+ L
Sbjct: 459 MQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEH-GFMPDIITFTSLIDGLCNTH 517
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVF 337
L + E M + W + P+ YN +++ C H K + +
Sbjct: 518 QLDDAFVCFEEMAE-------------WG--VRPNAQTYNVLMHTLCSAGHVNKAID-LL 561
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+++ G+ P A ++ + + K D + F M + G + TY L++A +E
Sbjct: 562 NKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDE 621
Query: 398 GKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
++N+A + E+ G Y+ + L G++ +A +++K S
Sbjct: 622 RRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKYLS 672
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 23/303 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G A VLD +K+K Y L+ L G AL N +L
Sbjct: 132 IITGFCRANRIDSAYQVLDR---MKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLL 188
Query: 256 EDCNLYPDIAAYHS-VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
++ N P + Y + TL Q G+ E +KL++ M + L+PD+
Sbjct: 189 KE-NCKPTVVTYTILIEATLLQGGI-DEAMKLLDEMLEIN---------------LQPDM 231
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN+++ F + + G P TY + + +L GK++ +E
Sbjct: 232 FTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSD 291
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G +TY VL+ + +GK+ E V +++M+++G+ Y L LC GR
Sbjct: 292 MVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGR 351
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 493
A+ V++ + S P + + ++ D+ +SIF+ + + C PN + N
Sbjct: 352 VDLAIEVLDVMIS-DGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYN 410
Query: 494 AML 496
+M
Sbjct: 411 SMF 413
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/526 (20%), Positives = 203/526 (38%), Gaps = 62/526 (11%)
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
L F + +LK L G++ +++ L + K D+ + TKL+ L +
Sbjct: 53 LDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDV---VLCTKLIHGLFTSKTID 109
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM- 301
+A+++ ++ LE+ + +PD+ AY+++ + + ++++RM+ K P N+
Sbjct: 110 KAIQVMHI-LEN-HGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNIL 167
Query: 302 -----HRKNWDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
R D LE P +V Y ++ A + + ++ + L
Sbjct: 168 IGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINL 227
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
+P TY + M + G D + ++ G A +TY +L+R +GK
Sbjct: 228 QPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYE 287
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ +M RG Y L +C +G+ ++ + +++ +K + KP + LI +
Sbjct: 288 LMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKK-KGLKPDGYCYDPLIAAL 346
Query: 466 MDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G +D I + M D C P+I N +L + +A +FE+ S
Sbjct: 347 CKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCS--- 403
Query: 525 FLSGDGAPLKPDEYTYSSMLEAS-ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
P+ +Y+SM A +T H+ + + M G D + L+
Sbjct: 404 ----------PNASSYNSMFSALWSTGHKVRALGMILE-MLDKGVDPDGITYNSLISCLC 452
Query: 584 RAGKC-HLLEHAFDSLLEAGEI-PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
R G +E D +E+ E P + + +L+ S A+ ++ AM
Sbjct: 453 RDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPN 512
Query: 642 ERQWTELFES------------------NEDRISRDKLEKLLNALC 669
E +T L E N D IS E+L C
Sbjct: 513 ETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHSFERLYKTFC 558
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 158/372 (42%), Gaps = 40/372 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ G EA+++ + MLE NL PD+ Y+S+ + + G + ++I +
Sbjct: 199 YTILIEATLLQGGIDEAMKLLDEMLE-INLQPDMFTYNSIIRGMCREGYVDRAFQIISSI 257
Query: 291 RQK---PSKRIKN------MHRKNW--------DPV---LEPDLVVYNAVLNACVPSHQW 330
K P N +++ W D V E ++V Y+ ++++ +
Sbjct: 258 SSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKV 317
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ + K ++K GLKP Y + + + G+ DL E M G + Y +
Sbjct: 318 EEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTI 377
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLR 449
+ ++ + +EA++ + + G AS Y + L + G A+ +++E + +
Sbjct: 378 LACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLD--K 435
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMK---DHCEPNIGTVNAML----KVYSRN 502
P IT+ LI G +D+ I + M+ C+P++ + N +L KV +
Sbjct: 436 GVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVS 495
Query: 503 DMFSKAKELFEETTRANSSGYTFL---SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
D + ++ R N + YTFL G G L ++++ A + FE +
Sbjct: 496 DAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHS--FERL 553
Query: 560 YKGMALSGCQLD 571
YK + C+LD
Sbjct: 554 YK----TFCKLD 561
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 179/427 (41%), Gaps = 37/427 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + ++ L K G EA +F+ M ++ PD+ ++S+ G+ G L E+ +L+E
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRM-KEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE 247
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR+ K D+V YNA++N + + + F +++ G+ +
Sbjct: 248 EMRRSGCK---------------ADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMAN 292
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ ++ + G + F +M G A+ TY L+ + G++++A+ +
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352
Query: 409 NMEQRGVVGTASVYYELACCLCNN---GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
M ++GV Y L LC +D + ++EK +R + E+ +T LI
Sbjct: 353 EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK-AGVRAN---ELLYTTLIHGH 408
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ + + + MK+ E +I A+++ +AK L T+ + SG
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLL---TKMDESG-- 463
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
L+P+ Y++M++A + + + + + SG Q + + L+ +
Sbjct: 464 --------LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCK 515
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
AG F+ + + G P+ +T ++ +AV L N M + + +
Sbjct: 516 AGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVV 575
Query: 645 WTELFES 651
+T L +
Sbjct: 576 YTALLDG 582
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 159/393 (40%), Gaps = 43/393 (10%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+ + M + G+M + +G R+AM + ++ + + F YT L
Sbjct: 278 YGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQ---MRVRGMALNEFTYTCL 334
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ---VGLLKELVKLIER-- 289
+ KAGR +A+ + + M+ + ++ Y + L + V +++++++E+
Sbjct: 335 IDGTCKAGRLDDAIVLLDEMVRQ-GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Query: 290 ---------------MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
K S++ + + + LE D+ +Y A++ H+
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+ ++ +SGL+P+ Y M+ +SGK +K+ SG +TY L+
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGL 513
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSK 452
+ G I+EA++ M G+ Y L LC NG +A+ + ++ K + K
Sbjct: 514 CKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK 573
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 511
+ +T L+ + G++ D ++ M D + ++ + + +M +A+E+
Sbjct: 574 ---VVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREV 630
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
F E G + PD Y+ ++
Sbjct: 631 FSEMI-------------GHGIAPDRAVYNCLI 650
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 4/222 (1%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
K++ K + LEP+ ++Y +++AC S + + +++ SG +P+ TY ++
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ ++G D F KM G Y LV + G +NEAV M +G+
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLD 572
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISI 477
VY L G DA + K K + L++ +T I + + + +
Sbjct: 573 KVVYTALLDGYLKQGNLHDAFAL--KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREV 630
Query: 478 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
F M H P+ N ++ Y + +A L +E R
Sbjct: 631 FSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERV 672
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/324 (18%), Positives = 133/324 (41%), Gaps = 22/324 (6%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLVD L + A+ +R+M ++G+ E L+ G + +A+ +L +
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ D+ +Y L+ L + EA + M ++ L P+ Y ++ + G
Sbjct: 428 GLELDIS---LYGALIQGLCNVHKLDEAKSLLTKM-DESGLEPNYIIYTTMMDACFKSGK 483
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ E + +++++ D +P+++ Y A+++ + F +
Sbjct: 484 VPEAIAMLQKI---------------LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+R GL P+ Y ++ + ++G + + F +M G ++ + Y L+ + ++G
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITF 458
+++A A M G+ Y CN +A V ++ + H P +
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM--IGHGIAPDRAVY 646
Query: 459 TGLIISSMDGGHIDDCISIFQHMK 482
LI G++++ IS+ M+
Sbjct: 647 NCLISKYQKLGNLEEAISLQDEME 670
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 144/356 (40%), Gaps = 26/356 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMEVMLQSGKYDLV 368
++ D V YNA+L+ C + ++ V++QL R G P+ ATY + ++ + + G++
Sbjct: 224 VQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEA 283
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
E + +M + +TY +L+ G ++ A +M + G+V SVY L
Sbjct: 284 GEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKG 343
Query: 429 LCNNGRWQDAMLVVEK--IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--H 484
C GR +A + +R I GL +D G + + + + +++
Sbjct: 344 FCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGL----LDSGMVSEATELLKQLENDAS 399
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
C P+ T ++ N ++A E+ E+ A +SG D ++YSSM+
Sbjct: 400 CSPDKVTFGTLIHGLCENGYANRAFEILED---ARNSGEEL----------DVFSYSSMI 446
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ VYK M GC+ + + L+ R K + + + G
Sbjct: 447 NRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCC 506
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDK 660
P + + ++ Y++A +L M F R + L + RDK
Sbjct: 507 PTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG----LCRDK 558
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 155/412 (37%), Gaps = 72/412 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L GL G +++A V W + + + Y L+ L ++G A R+++ M+
Sbjct: 270 MLDGLCKLGRFKEAGEV--WSRMMANNHQADT-VTYGILIHGLCRSGDVDSAARVYSDMV 326
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKL-----IERMRQKPSKRIKN---------- 300
+ L D++ Y+S+ +VG E K +RQ + I
Sbjct: 327 K-AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVS 385
Query: 301 -----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + D PD V + +++ + F + + R SG + +Y
Sbjct: 386 EATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSM 445
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + G+ +E ++ M K G + Y L+ F KIN+A+ M G
Sbjct: 446 INRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGC 505
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEK----------------IKSLRHSKPLEITF- 458
T Y L LC ++Q+A + ++ I+ L K +++
Sbjct: 506 CPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALR 565
Query: 459 -------TGLIISSM----------DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS 500
GL + M G +D+ I+ MK+ +C PN+ T N ++ +
Sbjct: 566 IWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFY 625
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
KA L +T + +G LKPD TY++ ++ + ++
Sbjct: 626 EIGSIDKAASL-----------WTAILDNG--LKPDIVTYNTRIKGLCSCNR 664
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/210 (18%), Positives = 87/210 (41%), Gaps = 21/210 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VY L+ + + ++A++I+ M + P I Y+++ L + +E L +
Sbjct: 476 VYNALINGFCRVSKINDAIKIYIEMTSN-GCCPTIITYNTLIDGLCKAEKYQEASSLTKE 534
Query: 290 MRQ---KPSKR-----IKNMHR--------KNWDPVLEP----DLVVYNAVLNACVPSHQ 329
M + KP R I+ + R + WD +L+ D++V+N +++ + +
Sbjct: 535 MLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGK 594
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
F ++ ++++ P+ TY M+ + G D + + +G +TY
Sbjct: 595 VDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNT 654
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++ + E V + + G++ T
Sbjct: 655 RIKGLCSCNRTPEGVLLLNEVLATGIMPTV 684
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/549 (17%), Positives = 222/549 (40%), Gaps = 43/549 (7%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
V+ DV G + + W +KR ++ + L+ L E + WK ++ M +S
Sbjct: 96 VMKTDV--GVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSP 153
Query: 186 L-MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+ + T ++ ++++ LG+ +A+++ Y +K ++ + Y ++ +L G+
Sbjct: 154 ICVVTPMELSQVIRMLGNAKMIGKAITIF---YQIKARKCQPTAQAYNSMIIMLIHEGQY 210
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM 301
+ ++N M + + +PD Y ++ ++G ++L+ M++ +P+ +I M
Sbjct: 211 EKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTM 270
Query: 302 ------HRKNWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
N L PD+ Y ++ + + + + ++++
Sbjct: 271 IISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQRED 330
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEA 403
KP + + ++G+ D + F +M S +TY +++A +E + +++E
Sbjct: 331 CKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEV 390
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ M+ G+ + Y L C R + AM+++E++ + P + LI
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE-KGFPPCPAAYCSLID 449
Query: 464 SSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSG 522
+ D +FQ +K++C + V A M+K + A LF+E ++ +
Sbjct: 450 ALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCT- 508
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
P+ Y Y++++ A A + + M GC D + +L
Sbjct: 509 ------------PNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGL 556
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE 642
++ G H ++ + P + + +L +E+A L+ M F
Sbjct: 557 AKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDL 616
Query: 643 RQWTELFES 651
++ + E+
Sbjct: 617 ITYSSILEA 625
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 162/373 (43%), Gaps = 52/373 (13%)
Query: 213 LDWVYG----LKDKRDLKSR---FVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDI 264
LD V+G ++ R + R F YT+L+ LGKAGR EA ++ M EDC PD
Sbjct: 278 LDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCK--PDT 335
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN------------------W 306
+++ LG+ G L + +KL E M S I N+ N W
Sbjct: 336 VVMNNMINFLGKAGRLDDGLKLFEEM--GVSHCIPNVVTYNTIIKALFESKSRVSEVFSW 393
Query: 307 -----DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
+ P Y+ +++ +++ + + +++ + G P A Y ++ + +
Sbjct: 394 FERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+ +YDL E F+++ ++ + A Y V+++ + G++++A+ M + G
Sbjct: 454 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYA 513
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQH 480
Y L L +A+ + K++ H +I +I++ + G + + +
Sbjct: 514 YNALMSGLARACMLDEALTTMRKMQ--EHGCLPDINSYNIILNGLAKTGGPHRAMEMLTN 571
Query: 481 MKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
MK+ +P+ + N +L S MF +A EL +E N+ G+ + D T
Sbjct: 572 MKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM---NALGFEY----------DLIT 618
Query: 540 YSSMLEASATAHQ 552
YSS+LEA Q
Sbjct: 619 YSSILEAIGKVDQ 631
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 22/243 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ---EL 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ LGKAGR +A+ +F+ M P++ AY+++ L + +
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEM-SKLGCTPNVYAYNALMSGLARACM 526
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E + + +M++ PD+ YN +LN + +
Sbjct: 527 LDEALTTMRKMQEHGCL---------------PDINSYNIILNGLAKTGGPHRAMEMLTN 571
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ S +KP A +Y + + +G ++ E ++M G +TY ++ A GK
Sbjct: 572 MKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAI---GK 628
Query: 400 INE 402
+++
Sbjct: 629 VDQ 631
>gi|302781402|ref|XP_002972475.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
gi|300159942|gb|EFJ26561.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
Length = 406
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 147/352 (41%), Gaps = 33/352 (9%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
G++++ + Y LL I A +AL F+ M E + P + YH + L ++
Sbjct: 3 GMEEQMIPMTYVTYRILLRIYVDASMVEDALETFHKM-EFSEIKPTLDDYHYIMFKLIRL 61
Query: 278 GLLKELVKLIERMRQ---KPSKRIKN-----------MHRKNW-----DPVLEPDLVVYN 318
+ + + E MR+ +P+ + N M W +PD Y
Sbjct: 62 KCPRVVPMIFESMRKNLVRPNTQTYNFLISSLCSLGKMAEARWRFSYMKKYCDPDEFTYA 121
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
A++N + + +++ GL+P+ A + + M+ +SGK++ V F +M +
Sbjct: 122 ALINGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEH 181
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+Y+VLV AF G+I+EA V+ Y L L + A
Sbjct: 182 ECRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAPHLGAYNTLMNRLGKANKAHAA 241
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKV 498
+ + KIK + KP +T+ LI G ID+C S +Q M+ H +P+I + N +L
Sbjct: 242 LEIFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMRLHFQPDIFSYNTLLGR 301
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
R + ++ +R DG ++ D TY+ ++E A A
Sbjct: 302 LGRAGRVDLFASVLDDMSR-----------DG--VQQDRITYAILVEGYARA 340
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 112/259 (43%), Gaps = 20/259 (7%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G Q +++ + + + + D KS Y L+ +GR EA F D P
Sbjct: 166 GKHEQVIALFERMVEHECRPDPKS---YRVLVEAFAVSGRIDEAFG-FVQRYADSENAPH 221
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ AY+++ LG+ +++ +++ +P+ + PDLV YN +++
Sbjct: 222 LGAYNTLMNRLGKANKAHAALEIFYKIKDRPNYK--------------PDLVTYNVLIDL 267
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
+ + ++++R +P +Y + + ++G+ DL M++ G
Sbjct: 268 LGKVGKIDECWSCYQKMRLH-FQPDIFSYNTLLGRLGRAGRVDLFASVLDDMSRDGVQQD 326
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+TY +LV + G ++ A+A + M+ G T S L L GR+ A VV+
Sbjct: 327 RITYAILVEGYARAGNLDVALAYLEEMKSSGFSPTPSALEVLVNSLLKAGRFGAAEAVVQ 386
Query: 444 KIKSLRHSKPLEITFTGLI 462
++ ++ + P + TG +
Sbjct: 387 EMAAI-NGGPGKKIVTGTL 404
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 160/366 (43%), Gaps = 33/366 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL--I 287
V+ ++ + ++GR +A ++ + M D + PD+ +++++ + G L V L +
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTM-HDRGIDPDLVSFNTLINARSKSGCLAAGVALDLL 281
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD++ YN +++AC S + VF+++ S +P
Sbjct: 282 FEVRQSG---------------LRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRP 326
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + V + GK + F ++ + G A+TY L+ AF +EG +++
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTC 386
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ + G Y + GR A+ + ++++++ P +T+T +I S
Sbjct: 387 EELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAV-GCTPDAVTYTVMIDSLGK 445
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
I + + + M D +P + +A++ Y++ + A++ F+ +SG
Sbjct: 446 MDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMI---ASG---- 498
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+KPD Y ML+ A + + E +Y+ M + D + LLV ++
Sbjct: 499 ------VKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKED 552
Query: 587 KCHLLE 592
KC +E
Sbjct: 553 KCEEIE 558
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 145/379 (38%), Gaps = 70/379 (18%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVA 271
LD ++ ++ Y L++ ++ +A+ +F M+ +C PD+ Y+++
Sbjct: 278 LDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECR--PDLWTYNAMV 335
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
G+ G +E +L + +K PD V YN++L A
Sbjct: 336 SVHGRCGKAEEAERLFGELVEKG---------------FMPDAVTYNSLLYAFAKEGNVD 380
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
V ++L K+G K + TY + + + G+ DL + +M G A+TY V++
Sbjct: 381 KVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMI 440
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ + KI EA + +M G+ T + L C GR DA
Sbjct: 441 DSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADA------------- 487
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
E TF +I S + +P+ ML V++R+ K L
Sbjct: 488 ---EKTFDCMIASGV-------------------KPDRLAYLVMLDVFARSGETEKMLRL 525
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+ N +PD+ Y +L A A + E E + + M L CQ+
Sbjct: 526 YRTMMNDN-------------YRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELL-CQMS 571
Query: 572 QTKHAWLLVEA---SRAGK 587
+ +L++A S+ GK
Sbjct: 572 LGVISTILIKARCVSQGGK 590
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/427 (18%), Positives = 175/427 (40%), Gaps = 33/427 (7%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S+ +Y +++ K G P A + + L+ ++ + G + L ++ L
Sbjct: 709 SKNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQAEIL 768
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++ +RQ + R+ W NA+++A S ++ VF + K+G
Sbjct: 769 VKGLRQA-----SGIDRRIW-----------NALIHAYAESGLYEKARAVFDNMIKTGPL 812
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ + M ++ G+ D ++ ++ I T +++ AF + G + E +
Sbjct: 813 PTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKI 872
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M+ G + +Y + LC++ R++D L++ +++ L I F L+
Sbjct: 873 YNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSI-FNSLLNMYT 931
Query: 467 DGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G+ D ++Q ++ EP+ T N ++ +Y R + G+T
Sbjct: 932 AAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCR--------------SLRPEEGFTL 977
Query: 526 LSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
L+ G L P +Y S+L ASA A E + +++ M QL+++ + ++
Sbjct: 978 LNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRN 1037
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
AG E+ + E G P ++ +A ++N++ + ++
Sbjct: 1038 AGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLP 1097
Query: 645 WTELFES 651
++ +F++
Sbjct: 1098 YSTVFDA 1104
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 131/306 (42%), Gaps = 23/306 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD V + V+ A V W+ F+ L +S P++ + + V+ ++ + + E
Sbjct: 155 PDEVAF--VVRA-VGESSWRRALDAFEWLARST-APASRAVAVVLGVLGRARQDSIAEEV 210
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F + A GE + ++ + G+ ++A + M RG+ + L
Sbjct: 211 FLRFA--GEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSK 268
Query: 432 NGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
+G A + ++ + +R S +P IT+ LI + +++D +++F+ M C P+
Sbjct: 269 SGCLA-AGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPD 327
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T NAM+ V+ R +A+ LF E PD TY+S+L A A
Sbjct: 328 LWTYNAMVSVHGRCGKAEEAERLFGELVEKG-------------FMPDAVTYNSLLYAFA 374
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ E+ + + +G + ++ + ++ + G+ L +D + G P +
Sbjct: 375 KEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAV 434
Query: 609 FFTEML 614
+T M+
Sbjct: 435 TYTVMI 440
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 24/186 (12%)
Query: 488 NIGTVNAMLKVYSRNDMFSKAKEL---------------FEETTRANSSGYTFLSGDG-- 530
+ NAM+ VY+R+ F A++L F A S +G
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 531 -------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+ L+PD TY++++ A + + E V++ M S C+ D + ++
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHG 339
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
R GK E F L+E G +P + + +L + N +K + A F E
Sbjct: 340 RCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEI 399
Query: 644 QWTELF 649
+ +
Sbjct: 400 TYNTMI 405
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 91/223 (40%), Gaps = 17/223 (7%)
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G T V+ + +GR+ DA +++ + R P ++F LI + G +
Sbjct: 216 GEGATVQVFNAMMGVYARSGRFDDARQLLDTMHD-RGIDPDLVSFNTLINARSKSGCLAA 274
Query: 474 CISI---FQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+++ F+ + P++ T N ++ S++ A +FEE
Sbjct: 275 GVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMI-------------A 321
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ +PD +TY++M+ + E E ++ + G D + LL ++ G
Sbjct: 322 SECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDK 381
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+EH + L++AG + + + M+ + AV L + M
Sbjct: 382 VEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 99/250 (39%), Gaps = 24/250 (9%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
+ QSGL L+ + A++V + + + + DL + Y ++++ G+
Sbjct: 284 VRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDL---WTYNAMVSVHGR 340
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-------LLKELVKLIERMRQK 293
G+ EA R+F ++E PD Y+S+ + G +ELVK + +
Sbjct: 341 CGKAEEAERLFGELVEK-GFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEI 399
Query: 294 PSKRIKNMHRKN---------WDPV----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ +M+ K +D + PD V Y ++++ + V + +
Sbjct: 400 TYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDM 459
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+GLKP+ + + + G+ + F M SG L Y V++ F G+
Sbjct: 460 ADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGET 519
Query: 401 NEAVAAVRNM 410
+ + R M
Sbjct: 520 EKMLRLYRTM 529
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 152/328 (46%), Gaps = 21/328 (6%)
Query: 311 EPDLVVYNAVLNACV--PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
+P + +YN +L+A + +++ + V++ +R G++P+ TY + ++ + ++GK D
Sbjct: 140 KPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGA 199
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
+ +M+K G ++Y +V A E+G++ EA R GVV SV L C
Sbjct: 200 CKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVV---SVCNALICG 256
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
LC GR + +++++ P ++++ +I D G ++ +++ M + C P
Sbjct: 257 LCREGRVGEVFGLMDEMVG-NGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRP 315
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA- 546
N+ T ++++K Y + L+ L G ++P+ Y+++L
Sbjct: 316 NVHTFSSLMKGYFLGGRVGEGVGLWR---------VMVLEG----VRPNVVVYNTLLNGL 362
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ + E + + C+ + T ++ L+ +AG ++ ++ G P+
Sbjct: 363 CCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPN 422
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ +T M+ S +++A LI+ MA
Sbjct: 423 VVVYTSMVDVLCKNSMFDQAYRLIDNMA 450
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 130/345 (37%), Gaps = 28/345 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+EP++ YN +L A + + G + ++ K G P +Y + M + G+ +
Sbjct: 176 MEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAR 235
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E R+ G L+ EG++ E + M GV Y + L
Sbjct: 236 EVARRFGAEGVVS---VCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWL 292
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
+ G + A+ V+ K+ R +P TF+ L+ GG + + + +++ M + PN
Sbjct: 293 SDVGEVELALAVLGKMIR-RGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPN 351
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEET-----TRANSSGYTFL------SGD--GAP--- 532
+ N +L + ++A ++ R N + Y+ L +GD GA
Sbjct: 352 VVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVW 411
Query: 533 -------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
++P+ Y+SM++ ++ + MA GC +
Sbjct: 412 NKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCG 471
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
G+ D + G +P + E+L + ++A LI
Sbjct: 472 GRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELI 516
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 75/186 (40%), Gaps = 15/186 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VY LL L +G EA+ + M +DC P++ Y ++ + G L+ ++ +
Sbjct: 354 VYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNK 413
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + P++VVY ++++ + + + + + G P+
Sbjct: 414 MVNCGVR---------------PNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTV 458
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T+ ++ + G+ +M + G TY L+ + ++ EA +R
Sbjct: 459 VTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRE 518
Query: 410 MEQRGV 415
+E+R V
Sbjct: 519 LEERKV 524
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 117/303 (38%), Gaps = 19/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G+ +A+ V + KD + Y+ L+ KAG A ++N M+
Sbjct: 358 LLNGLCCSGNLAEAVDVCGRME--KDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMV 415
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+C + P++ Y S+ L + + + +LI+ M P +V
Sbjct: 416 -NCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCP---------------PTVV 459
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N + + V Q+++ G P TY ++ + + E R++
Sbjct: 460 TFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIREL 519
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ + +TY ++ F GK + + M GV A + G+
Sbjct: 520 EERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKV 579
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+ A+ +++I + + P I T L+ + I++ I M + PNI T +
Sbjct: 580 RTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDV 639
Query: 495 MLK 497
+++
Sbjct: 640 LVR 642
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 155/377 (41%), Gaps = 34/377 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G +A+ + D G + D+ + Y L+ L K G A+R+ M+
Sbjct: 226 LIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT---YGTLMNGLCKVGNTSAAIRLLRSMV 282
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N P++ AY+++ +L + + E L M K + PD+
Sbjct: 283 QK-NCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKG---------------ISPDIF 326
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN++++A +WK V + ++ S + P+ + ++ + + G + H+ M
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 386
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G +TY L+ +++EAV M +G V Y L C R
Sbjct: 387 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 446
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNA 494
AM ++E++ SL+ +T+ LI G + I++F M + P++ T
Sbjct: 447 DKAMGLLEQM-SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 505
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+L +N ++A L + +G+ L D Y+ ++ A + E
Sbjct: 506 LLDYLCKNHHLAEAMVLLKAI-------------EGSNLDADILVYNIAIDGMCRAGELE 552
Query: 555 YFEYVYKGMALSGCQLD 571
++ ++ G Q D
Sbjct: 553 AARDLFSNLSSKGLQPD 569
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/331 (18%), Positives = 126/331 (38%), Gaps = 29/331 (8%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD +N ++ + +F + G +P TYG M + + G
Sbjct: 217 QPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIR 276
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
R M + + Y ++ + ++ ++ EA M +G+ Y L LC
Sbjct: 277 LLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALC 336
Query: 431 NNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
N W+ V + + +SK P + F+ ++ + G I + M K EP
Sbjct: 337 NLCEWKH---VTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 393
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++ T A++ + +A ++F+ P+ +Y+ ++
Sbjct: 394 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV-------------PNVRSYNILINGY 440
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL--LEHA---FDSLLEAG 602
+ + + + M+L G D + L+ G CH+ L+HA F ++ +G
Sbjct: 441 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI-----HGLCHVGRLQHAIALFHEMVASG 495
Query: 603 EIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+IP + + +L + +A+ L+ A+
Sbjct: 496 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 526
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/380 (18%), Positives = 129/380 (33%), Gaps = 51/380 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P V + +L + + V + Q+ G+ P T + + +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G T+ L+R EGKI EA+ G Y L LC
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
G A I+ LR SM ++ +C PN+
Sbjct: 268 VGNTSAA------IRLLR---------------SM--------------VQKNCRPNVIA 292
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ ++ ++A LF E S PD +TY+S++ A
Sbjct: 293 YNTIIDSLCKDRQVTEAFNLFSEMITKGIS-------------PDIFTYNSLIHALCNLC 339
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+W++ + M S + + ++ + G + D +++ G P + +T
Sbjct: 340 EWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYT 399
Query: 612 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 671
++ ++S ++AV + + M + R + L DK LL +
Sbjct: 400 ALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 459
Query: 672 NAASSEITVSNLSRALHALC 691
+ +T + L +H LC
Sbjct: 460 GLIADTVTYNTL---IHGLC 476
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 15/163 (9%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L D Y+++ L VG L+ + L M S +I PDLV Y
Sbjct: 461 LIADTVTYNTLIHGLCHVGRLQHAIALFHEM--VASGQI-------------PDLVTYRI 505
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+L+ +H + K + S L Y +A++ M ++G+ + + F ++ G
Sbjct: 506 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 565
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
TY +++ + G ++EA R M++ G +Y
Sbjct: 566 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIY 608
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 137/332 (41%), Gaps = 23/332 (6%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D + P++ YNA+++ + ++ +FK++ GL+P+ TY + + + + G +
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F KM G + Y L+ + ++G ++ A + M + G+ TA+ Y L
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
LC NG M + ++ R TFT LI +D+ +F M D +
Sbjct: 451 AGLCRNGDLSSCMELHREMAE-RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PN T N M++ Y KA +L+++ LKPD YTY S++
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG-------------LKPDNYTYRSLIS 556
Query: 546 A----SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
S + E+ + A+ L+ LL R G+ H +D +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAV----LNNFSLTALLYGFFREGRFTETYHLWDEMAVR 612
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G + FT ++ A+ Q + EK+ L M
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 98/501 (19%), Positives = 187/501 (37%), Gaps = 42/501 (8%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
A L+D+L + E + + M GL E L+ L +G A+ + D
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD-- 397
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
++DK + + Y L+ K G A + + M+++ L P A+Y + L +
Sbjct: 398 -KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE-GLTPTAASYSPLIAGLCR 455
Query: 277 VGLLKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVV 316
G L ++L M + K + K D + P+ V
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+N ++ + F ++ Q+ + GLKP TY + + + +EF +
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRW 435
S + + L+ F+ EG+ E M RGV + S + L + +
Sbjct: 576 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
+ +L E + + KP +I +T +I + ++ ++ + M D PN T
Sbjct: 636 KSCVLFREMKE--QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 693
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ ++ A+ L +E N + P+++TY+ L+ AT E
Sbjct: 694 LINNLCKSGYLGSAELLCKEMLAGN-------------VLPNKFTYNCFLDYFATEGDME 740
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ ++ M L G L+ +AGK + E+G P + ++ ++
Sbjct: 741 KAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799
Query: 615 IQAIVQSNYEKAVALINAMAY 635
+ + KA L N M Y
Sbjct: 800 HELCKMGDINKAFELWNEMLY 820
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 148/402 (36%), Gaps = 53/402 (13%)
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S +T+ Q + L L+ ++RQ R ++ K + D VY A + A S
Sbjct: 156 SSGITVNQYTASQILFSLV-KIRQFALAR--DLFDKMLQSGVHLDEYVYTAGIRAYCESR 212
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
G + ++ G+K SA Y + M + ++ + E M G +TY+
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY----------------YELAC----- 427
LV F ++ A+ +M + G V + + + LAC
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332
Query: 428 --------------CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
LC N R+ DA + +++ R +P E+T+ LI + G I+D
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAG-RGLEPNEVTYAILIHALCKRGMIED 391
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ +F M+D + + N+++ Y + +A+ L +
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG------------- 438
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
L P +YS ++ +++ MA G + L+ + K
Sbjct: 439 LTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAA 498
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
FD ++++ IP+ + F M+ + N KA L + M
Sbjct: 499 RLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 70/373 (18%), Positives = 137/373 (36%), Gaps = 50/373 (13%)
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
SG+ + T + +++ ++ L + F KM +SG + Y +RA+ E ++
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A V ME GV +A Y L LC N R Q+A+ V + ++ + E+T+ L+
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTAD-EVTYRTLV 275
Query: 463 ISSMDGGHIDDCISIFQHM--------KDHCE---------------------------- 486
++ + I M + +C
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ NA++ +N+ F A LF+E ++G G L+P+E TY+ ++ A
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKE-----------MAGRG--LEPNEVTYAILIHA 382
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
E ++ M G ++ + L+ + G +++ G P
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLN 666
++ ++ + + L MA +T L D+ +L +
Sbjct: 443 AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502
Query: 667 ALCNCNAASSEIT 679
+ + N +E+T
Sbjct: 503 KMIDSNVIPNEVT 515
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 170/418 (40%), Gaps = 39/418 (9%)
Query: 150 RWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
+ +S ++++ L + K F+ M G+ ++ G +G A
Sbjct: 231 KIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGA 290
Query: 210 MSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
VLD +K++ + Y L++ + K G+ EA I M ++ L P Y++
Sbjct: 291 RMVLDI---MKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM-KEIGLLPTAVTYNT 346
Query: 270 VAVTLGQVG-LLKELVKLIERMRQK--PSKRIKN-----------------MHRKNWDPV 309
+ G L+K E +R+ P+ N M + D
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD + YN ++N K F + ++ G++P+ TY + V+ + +
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ F K+ + G + + + L+ G ++ A A ++ M++R +V Y L
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C G+ ++A +++++K R +P I++ LI G I+D +I M P
Sbjct: 527 CREGKVEEARELLKEMKR-RGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPT 585
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ T NA+++ +N A+EL +E S G T PD+ TY S++E
Sbjct: 586 LLTYNALIQGLCKNQQGDLAEELLKEMV---SKGIT----------PDDSTYFSLIEG 630
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 173/396 (43%), Gaps = 36/396 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + ++ +L K G+ +A + F +E+ + P++ Y++V G ++ +++
Sbjct: 237 YTFNIMINVLCKEGKLKKA-KDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD 295
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+ + +EPD Y ++++ + + + +++++ GL P+
Sbjct: 296 IMKNRG---------------VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPT 340
Query: 349 AATYGLAMEVMLQSGKYDLVHEF-FR-KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
A TY ++ G DLV F +R +M + TY +L+ A + EGK++EA
Sbjct: 341 AVTYNTLIDGYCNKG--DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGM 398
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+++M G+V + Y L C G + A + +++ S + +P +T+T LI
Sbjct: 399 IKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMIS-KGIQPTLVTYTSLIYVLS 457
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
+ +F+ + ++ P++ NA++ + N +A L +E + N
Sbjct: 458 KRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN------ 511
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+ PDE TY+++++ + E + K M G + D + L+ S+
Sbjct: 512 -------IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKR 564
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
G + D +L G P L + LIQ + ++
Sbjct: 565 GDINDAFTIRDEMLSIGFNPTLLTYNA-LIQGLCKN 599
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 133/326 (40%), Gaps = 21/326 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P + +NA+L+ + +Q + V+ ++ ++ + +K + T+ + + V+ + GK +F
Sbjct: 199 PKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDF 258
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
M G +TY ++ + G++ A + M+ RGV + Y L +C
Sbjct: 259 IGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCK 318
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE----P 487
G+ ++A ++EK+K + P +T+ LI + G D + F + + P
Sbjct: 319 GGKLEEASGILEKMKEI-GLLPTAVTYNTLIDGYCNKG---DLVKAFGYRDEMVRRAILP 374
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
+ T N ++ LF E + G GD + PD TY+ ++
Sbjct: 375 TVSTYNLLIHA------------LFLEGKMDEADGMIKDMGDSG-IVPDSITYNILINGY 421
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ ++ M G Q + L+ S+ + + F+ ++ G P
Sbjct: 422 CRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDL 481
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAM 633
+ F ++ N ++A AL+ M
Sbjct: 482 IMFNALIDGHCANGNLDRAFALLKEM 507
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/521 (19%), Positives = 208/521 (39%), Gaps = 76/521 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G ++A S+L+ +K K + L+ LGK G+ A + +M+
Sbjct: 244 LVYGFCIMGHLKEAFSLLNE---MKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300
Query: 256 EDCNLYPDIAAYHS----------------VAVTLGQVGL---LKELVKLI-----ERMR 291
+ C + PD+ Y+S V ++ Q G+ ++ +I E+M
Sbjct: 301 KAC-IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ + M KN + PD+V Y ++++ +H + + K++++ G++P +
Sbjct: 360 DEAMSLFEEMKYKN----MIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYS 415
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + ++ + + G+ + EFF+++ G + TY V++ + EA+ ME
Sbjct: 416 YTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKME 475
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGG 469
+G + A + + C L A ++ ++ + L+ ++ + + ++++ M
Sbjct: 476 GKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKA 535
Query: 470 HIDDCISIFQHMKD---------------------HCEPNIGTVNAMLKVYSRNDMFSKA 508
I + + + D PN+ M+ + +A
Sbjct: 536 CIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEA 595
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
LFEE N + P+ TY+S+++A H E + K M G
Sbjct: 596 MSLFEEMKHKN-------------MFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGI 642
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
Q D + LL ++G+ + F LL G + +T M+ + +++A+
Sbjct: 643 QPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALD 702
Query: 629 LINAM---AYAPFHITERQWT-ELFESNEDRISRDKLEKLL 665
L M P +T LFE +E+ DK EK+L
Sbjct: 703 LQXKMEDKGCMPDAVTFDIIIWALFEKDEN----DKAEKIL 739
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 134/320 (41%), Gaps = 23/320 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL +G ++A+ D V + + S Y L+ L K G R+ L
Sbjct: 139 LIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS---YRTLINGLCKTGETKAVARLLR-KL 194
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E ++ PD+ Y+++ +L + LL + L M K + P++V
Sbjct: 195 EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKG---------------ISPNVV 239
Query: 316 VYNA-VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YNA V C+ H K F + +++ + P T+ ++ + + GK
Sbjct: 240 TYNALVYGFCIMGH-LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAV 298
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K+ +TY L+ ++ K+ A +M Q GV Y + LC
Sbjct: 299 MMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKM 358
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
+AM + E++K ++ P +T+T LI H++ I++ + MK+ +P++ +
Sbjct: 359 VDEAMSLFEEMKY-KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYT 417
Query: 494 AMLKVYSRNDMFSKAKELFE 513
+L + AKE F+
Sbjct: 418 ILLDALCKGGRLENAKEFFQ 437
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/359 (18%), Positives = 127/359 (35%), Gaps = 52/359 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +N +L++ V + + V +FK+ +G P T + M
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA-------------------------- 405
+ K G A+T L++ G+I +A+
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180
Query: 406 ---------AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLE 455
+R +E V +Y + LC N DA L E I ++ P
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI--VKGISPNV 238
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+ L+ GH+ + S+ MK + P++ T N ++ + AK +
Sbjct: 239 VTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAV 298
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ A +KPD TY+S+++ ++ + +YV+ MA SG +
Sbjct: 299 MMK-------------ACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRT 345
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ ++ + F+ + IP + +T ++ + E+A+AL M
Sbjct: 346 YTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKM 404
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/415 (19%), Positives = 168/415 (40%), Gaps = 42/415 (10%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
K +K GD+G R A + W + K + F Y +L + KA R A +F+ +
Sbjct: 187 KFVKAYGDRGDIRGA---IHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQI 243
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ + PD++ Y ++ ++G+++ + + M K P+L
Sbjct: 244 VKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMGCK------------------PNL 285
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
V YN ++N + + Q+ ++ P TY ++ + G+ + ++
Sbjct: 286 VTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYME 345
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M LTY ++ G ++EA + M G+ + + + LC G
Sbjct: 346 EMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVG 405
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISS-MDGGHIDDCISIFQHMKDH-CEPNIGT 491
+ DA ++++ L + G++++ G DD IS+ + MK P++ +
Sbjct: 406 KLDDAARHLKEMVGL--GMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSS 463
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA--SAT 549
NA+ ++ + KA + + + + P+ +YS++++ A
Sbjct: 464 FNAVFRILVESGKTDKAGLILRQMKQLGCT-------------PNFLSYSTVIDGLCKAK 510
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
E E+V M +G LD + ++WL+ G + F +L+ G +
Sbjct: 511 GRMHEVEEFV-DDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYV 564
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 157/378 (41%), Gaps = 47/378 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G A++VLD + +R + YT LL K +A+++ + M
Sbjct: 164 LIRGLCGRGRTANALAVLDEML---RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM- 219
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D PDI Y+ V + Q G + + IE ++ PS EP+ V
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDA---IEFLKNLPSYGC------------EPNTV 264
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN VL + +W+ + ++ + G P+ T+ + + + + G + E ++
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G +L+Y L+ AF ++ K+++A+A + M RG Y L LC +G
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 384
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ ++ ++K + P+ I++ +I G + + + M +P+I T +
Sbjct: 385 DVAVELLHQLKD-KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 443
Query: 495 MLKVYSRNDMFSKAKELFEET----TRANSSGY--------------------TFLSGDG 530
+ R D A F + R N+ Y ++ G+G
Sbjct: 444 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 503
Query: 531 APLKPDEYTYSSMLEASA 548
P+E TY+ ++E A
Sbjct: 504 C--MPNESTYTILIEGLA 519
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/395 (19%), Positives = 151/395 (38%), Gaps = 39/395 (9%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ L +GR EA R+ L C PD+ AY+++ G L +L+ M
Sbjct: 102 LIKKLSASGRTAEARRV----LAACG--PDVMAYNAMVAGYCGAGQLDAARRLVAEM--- 152
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
PV EPD YN ++ + V ++ + P TY
Sbjct: 153 --------------PV-EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYT 197
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +E + Y + +M G +TY V+V +EG++++A+ ++N+
Sbjct: 198 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 257
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G Y + LC RW+DA ++ ++ + P +TF LI G ++
Sbjct: 258 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQ-KGCPPNVVTFNMLISFLCRKGLVEP 316
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ + + + + C PN + N +L + + KA + + G
Sbjct: 317 ALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD-----------LMVSRGC- 364
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
PD +Y+++L A + + + + + GC + ++ ++AGK
Sbjct: 365 -YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 423
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
+ ++ G P + ++ + + E A+
Sbjct: 424 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 141/341 (41%), Gaps = 28/341 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLM 254
LL+ + ++QAM +LD ++DK Y ++ + + GR +A+ NL
Sbjct: 199 LLEATCKRSGYKQAMKLLDE---MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 255
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM-----HRKNW 306
C P+ +Y+ V L ++ +L+ M QK P+ NM RK
Sbjct: 256 SYGCE--PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 313
Query: 307 -DPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+P LE P+ + YN +L+A + + G P +Y
Sbjct: 314 VEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 373
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + +SG+ D+ E ++ G A ++Y ++ + GK EA+ + M +G
Sbjct: 374 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 433
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ Y +A LC R +DA+ K++ + +P + + +I+
Sbjct: 434 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM-GIRPNTVLYNAIILGLCKRRETHSA 492
Query: 475 ISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
I +F +M + C PN T +++ + + +A++L +E
Sbjct: 493 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 533
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 144/356 (40%), Gaps = 33/356 (9%)
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+L S +P A T ++ + SG+ E R +A G + + Y +V + G
Sbjct: 86 RLVGSARRPDAGTCAALIKKLSASGR---TAEARRVLAACGPDV--MAYNAMVAGYCGAG 140
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+++ AA R + + V A Y L LC GR +A+ V++++ R P +T+
Sbjct: 141 QLD---AARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR-RRCVPDVVTY 196
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
T L+ ++ + + M+D C P+I T N ++ + A E +
Sbjct: 197 TILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLK---- 252
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
N Y +P+ +Y+ +L+ TA +WE E + M GC +
Sbjct: 253 -NLPSYG--------CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 303
Query: 578 LLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM- 633
L+ R G L+E A + L + G P+ L + +L Q +KA+A ++ M
Sbjct: 304 LISFLCRKG---LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360
Query: 634 ---AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 686
Y T L S E ++ + L +L + C S + L++A
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+AM+ LD + D+ S Y LL L ++G A+ + + L+D P + +Y
Sbjct: 351 KAMAFLDLMVSRGCYPDIVS---YNTLLTALCRSGEVDVAVELLH-QLKDKGCAPVLISY 406
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++V L + G KE ++L+ M K L+PD++ Y+ +
Sbjct: 407 NTVIDGLTKAGKTKEALELLNEMVSKG---------------LQPDIITYSTIAAGLCRE 451
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + F +++ G++P+ Y + + + + + F M +G TY
Sbjct: 452 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 511
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+L+ EG I EA + + RGVV
Sbjct: 512 TILIEGLAYEGLIKEARDLLDELCSRGVV 540
>gi|297820862|ref|XP_002878314.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324152|gb|EFH54573.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 475
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 150/378 (39%), Gaps = 68/378 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA-AYHSVAVTLGQVGLLKELVKLIER 289
Y L+ I + G R+ + M++D +P A ++ + + G+ GL K+ V ++
Sbjct: 154 YHLLMKIFAECGEYKAMWRLVDEMVQDG--FPTTARTFNLLICSCGEAGLAKQAV--VQF 209
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K N+ P YNA+LN+ + Q+K + WV++Q+ + G P
Sbjct: 210 MKSKTF---------NYRPFKHS----YNAILNSLLGVKQYKLIEWVYEQMLEDGFSPDV 256
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + GK D F +MA+ G + TY +L+ GK N+ +AA+
Sbjct: 257 LTYNILLWTNYRLGKMDRFDRLFDEMARDGLSPDFYTYNILLHIL---GKGNKPLAALTT 313
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ VG S+ H +T LI G
Sbjct: 314 LNHMKEVGIDL--------------------------SVLH-------YTTLIDGLSRAG 340
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+++ C M K C P++ M+ Y + KAKE+F+E T
Sbjct: 341 NLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKAKEMFKEMTVEGQL------- 393
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
P+ +TY+SM+ A ++ ++ K M GC + ++ L+ +AGK
Sbjct: 394 ------PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 447
Query: 589 HLLEHAFDSLLEAGEIPH 606
+++ G H
Sbjct: 448 SEARKVIRDMVKKGHYVH 465
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 23/269 (8%)
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+Y +L++ F E G+ V M Q G TA + L C G + A++ K
Sbjct: 153 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 212
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCIS-IFQHM-KDHCEPNIGTVNAMLKVYSRND 503
K+ + +P + ++ I++S+ G I +++ M +D P++ T N +L R
Sbjct: 213 KTFNY-RPFKHSYNA-ILNSLLGVKQYKLIEWVYEQMLEDGFSPDVLTYNILLWTNYRLG 270
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+ LF+E R DG L PD YTY+ +L ++ M
Sbjct: 271 KMDRFDRLFDEMAR-----------DG--LSPDFYTYNILLHILGKGNKPLAALTTLNHM 317
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
G L + L+ SRAG ++ D +++AG P + +T M+ +V
Sbjct: 318 KEVGIDLSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGEL 377
Query: 624 EKAVALINAMAYAPFHITERQWTELFESN 652
EKA + M E Q +F N
Sbjct: 378 EKAKEMFKEMT------VEGQLPNVFTYN 400
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 128/326 (39%), Gaps = 39/326 (11%)
Query: 145 WHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
W E+ +R + +L+ +E W+ V M Q G T L+ G+
Sbjct: 140 WSGEQDCFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEA 199
Query: 204 GSWRQAMSVLDWVYGLKDK----RDLKSRF--VYTKLLAILGKAGRPHEALR-IFNLMLE 256
G +QA+ V +K K R K + + LL + + ++ + ++ MLE
Sbjct: 200 GLAKQAV-----VQFMKSKTFNYRPFKHSYNAILNSLLGV-----KQYKLIEWVYEQMLE 249
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ------------------KPSKRI 298
D PD+ Y+ + T ++G + +L + M + K +K +
Sbjct: 250 D-GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGLSPDFYTYNILLHILGKGNKPL 308
Query: 299 KNMHRKNWDPVLEPDLVV--YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+ N + DL V Y +++ + + + ++ K+G +P Y + +
Sbjct: 309 AALTTLNHMKEVGIDLSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMI 368
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ SG+ + E F++M G+ TY ++R G+ EA ++ ME RG
Sbjct: 369 TGYVVSGELEKAKEMFKEMTVEGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCN 428
Query: 417 GTASVYYELACCLCNNGRWQDAMLVV 442
VY L L G+ +A V+
Sbjct: 429 PNFVVYSTLVSYLRKAGKLSEARKVI 454
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 21/174 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y LL ILGK +P AL N M ++ + + Y ++ L + G L+ ++
Sbjct: 292 YTYNILLHILGKGNKPLAALTTLNHM-KEVGIDLSVLHYTTLIDGLSRAGNLEACKYFLD 350
Query: 289 RMRQKPSK--------------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M + + + K M ++ P++ YN+++ +
Sbjct: 351 EMVKAGCRPDVVCYTVMITGYVVSGELEKAKEMFKEMTVEGQLPNVFTYNSMIRGLCMAG 410
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+++ W+ K++ G P+ Y + + ++GK + R M K G +
Sbjct: 411 EFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRDMVKKGHYV 464
>gi|356529805|ref|XP_003533478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Glycine max]
Length = 1092
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 139/365 (38%), Gaps = 74/365 (20%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P L +N +++ C S +G F V + L+ + L+P Y + +SGK DL+ E
Sbjct: 458 PMLSTFNMLMSVCASSQDSEGAFQVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMFEV 517
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F KM SG TY L+ G++ +A A M + V
Sbjct: 518 FHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNV---------------- 561
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE---PN 488
KP + F LI + G +D + M + P+
Sbjct: 562 --------------------KPDRVVFNALIAACAQSGALDRAFDVLAEMTAETQPIDPD 601
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T+ A+LK ++ +AKE+++ + N G P+ YT + + + +
Sbjct: 602 HVTIGALLKACTKAGQVERAKEVYKMVQKYNIKGC-----------PEVYTIA--INSCS 648
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIP 605
WE+ VY M G D+ + L+ A A K L+ AFD L EA G +
Sbjct: 649 QTGDWEFAHTVYNDMTQKGILPDEIFLSALIDVAGHAKK---LDAAFDVLQEARKGGILI 705
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLL 665
+ ++ ++ N++KA+ L E +S + I+ + LL
Sbjct: 706 GIMSYSSLMGACSNARNWQKALELY----------------EYLKSLKLTITVSTVNALL 749
Query: 666 NALCN 670
ALC+
Sbjct: 750 TALCD 754
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 118/318 (37%), Gaps = 62/318 (19%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ +AG+ +A + +M N+ PD ++++ Q G L ++
Sbjct: 532 TYGALIDGCARAGQVAKAFGAYGIMRSK-NVKPDRVVFNALIAACAQSGALDRAFDVLAE 590
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + ++PD V A+L AC + Q + V+K ++K +K
Sbjct: 591 MTAETQP-------------IDPDHVTIGALLKACTKAGQVERAKEVYKMVQKYNIKGCP 637
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +A+ Q+G ++ H + M + G + L+ K++ A ++
Sbjct: 638 EVYTIAINSCSQTGDWEFAHTVYNDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQE 697
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ G++ Y L N WQ A+ + E +KSL+ L IT
Sbjct: 698 ARKGGILIGIMSYSSLMGACSNARNWQKALELYEYLKSLK----LTIT------------ 741
Query: 470 HIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ TVNA+L D F KA E+ E
Sbjct: 742 -------------------VSTVNALLTALCDGDQFQKALEVLFEM-------------K 769
Query: 530 GAPLKPDEYTYSSMLEAS 547
G L+P+ T+S ++ AS
Sbjct: 770 GLGLRPNSITFSILIVAS 787
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 141/330 (42%), Gaps = 31/330 (9%)
Query: 197 LKGLGDKGSWRQAMSVL----DWVYGLKDKRDLKSRFV------YTKLLAILGKAGRPHE 246
L+ L D S+ +S+ D L+ ++++SR + YT L+ + K G+
Sbjct: 138 LRALCDVYSYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPL 197
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
AL I+N M N P++ Y+++ G++G + + +++ M+ +
Sbjct: 198 ALDIYNSM-RAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHEG------------ 244
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+EP L YN ++ AC +Q + V+++L G P++ TY + ++ +
Sbjct: 245 ---VEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLG 301
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
E +++M + +TY L+ A + G+ A+ M+Q V Y L
Sbjct: 302 KALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLV 361
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 485
G+W+ A V E++ + P +T+T LI + GG + F M C
Sbjct: 362 TACAQGGQWEKAAEVFEQMNA-HGCTPDVVTYTALISAYERGGQWQKALQAFHKMCVQGC 420
Query: 486 EPNIGTVNAMLKVYSRNDMF---SKAKELF 512
+P+ NA++ + KA +LF
Sbjct: 421 KPDAIVYNAIIDTLWETGIIWAQGKALQLF 450
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 52/296 (17%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+ Y A ++ C+ + +++R ++ + TY M V ++ GK L + +
Sbjct: 143 DVYSYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIY 202
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLC 430
M +TY LV + + G+ A+ + M+ GV Y L AC +C
Sbjct: 203 NSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMC 262
Query: 431 NNGRWQDAMLVVEKI--------------------KSLRHSKPLE--------------I 456
N R +A+ V +++ K+ + K LE I
Sbjct: 263 NQPR--EALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVI 320
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T++ LI + G + + IF M +D C PN T N+++ ++ + KA E+FE+
Sbjct: 321 TYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQM 380
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
N+ G T PD TY++++ A QW+ + M + GC+ D
Sbjct: 381 ---NAHGCT----------PDVVTYTALISAYERGGQWQKALQAFHKMCVQGCKPD 423
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 140/337 (41%), Gaps = 19/337 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V +N +L+A V ++ V + K++ G++ T+ + + + L
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K G +T LV F ++++AV+ V M + G Y + LC
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
R DA ++I+ + +P +T+T L+ + D + M K PN+
Sbjct: 203 TKRVNDAFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T +A+L + +N +AKELFEE R + + PD TYSS++
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMS-------------IDPDIVTYSSLVNGLCLH 308
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ + ++ M GC D + L+ +A + F + + G + + + +
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 611 TEMLIQAIVQS-NYEKAVALINAMAYAPFHITERQWT 646
LIQ Q+ + +KA + M + F I+ WT
Sbjct: 369 NT-LIQGFFQAGDVDKAQEFFSQMDF--FGISPDIWT 402
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 130/348 (37%), Gaps = 40/348 (11%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +A+ + + M+E PDI AY+++ +L + + + + + +K
Sbjct: 170 RVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-------- 220
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
+ P++V Y A++N S +W + + K + P+ TY ++ +++
Sbjct: 221 -------IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
GK E F +M + +TY LV +I+EA M +G + Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
L C R +D M + ++ S R +T+ LI G +D F M
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 483 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE----------------------TTRAN 519
P+I T N +L N KA +FE+ T +
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+ F S LKPD TY++M+ T E +Y M G
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 124/305 (40%), Gaps = 15/305 (4%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD+V YNA++++ + + F FK++ + G++P+ TY + + S ++
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
M K +TY L+ AF + GK+ EA M + + Y L LC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLC 306
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
+ R +A + + + S + +++ LI ++D + +F+ M N
Sbjct: 307 LHDRIDEANQMFDLMVS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N +++ + + KA+E F + D + PD +TY+ +L
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQM-------------DFFGISPDIWTYNILLGGLCD 412
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ E +++ M LD + ++ + GK F SL G P +
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 610 FTEML 614
+T M+
Sbjct: 473 YTTMM 477
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD+ YN +L + + + +F+ ++K + TY + M ++GK +
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
F ++ G +TY ++ +G ++E A M+Q G++
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 6/215 (2%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P P + +YN VL + + + W++K + +G+ P T L + + SG+++
Sbjct: 110 PANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFED 169
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
E F KM G ++ +LVR + G A+ + M GV +Y L
Sbjct: 170 AREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLIS 229
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE- 486
C GR ++A +VE+++ P +TF I + G I + IF+ M+ E
Sbjct: 230 SFCREGRNEEAERLVERMRE-DGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEEL 288
Query: 487 ----PNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
PNI T N ML+ + + M +AK L E R
Sbjct: 289 GLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKR 323
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 172/399 (43%), Gaps = 40/399 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL D G + A V D + G+K R + F + L+ +AG AL + + M
Sbjct: 157 LIAGLCDSGRFEDAREVFDKM-GVKGCR--PNEFSFGILVRGYCRAGLSMRALELLDGM- 212
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y+++ + + G +E +L+ERMR+ L PD+V
Sbjct: 213 GSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDG---------------LFPDVV 257
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLR---KSGL-KPSAATYGLAMEVMLQSGKYDLVHEF 371
+N+ ++A + + +F+ ++ + GL +P+ T+ L +E + G +
Sbjct: 258 TFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTL 317
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
M ++G + +Y + + GK+ EA A++ M +G+ + + LC
Sbjct: 318 VESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCK 377
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIG 490
NG DA +++ + S P +T++ L+ G + +I + M+ C PN
Sbjct: 378 NGLISDARMIMGLMIS-SGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTY 436
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N +L + +A++L + + N Y D T + +++ +
Sbjct: 437 TCNILLHSLWKEGRIFEAEKLLQ---KMNERSYDL----------DNVTCNIVIDGLCKS 483
Query: 551 HQWEYFEYVYKGMALSG-CQLDQTKHAWL-LVEASRAGK 587
+ + + +GM + G L ++++ LV++S GK
Sbjct: 484 GKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGK 522
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/429 (19%), Positives = 161/429 (37%), Gaps = 52/429 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNL---YPDIAAYHSVAVTLGQVGLLKELVKL 286
+ ++ L AG+ EA RIF M D L P+I ++ + + G+L+E L
Sbjct: 258 TFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTL 317
Query: 287 IERMRQKPS------------KRIKNMH--------RKNWDPVLEPDLVVYNAVLNACVP 326
+E M++ + ++N ++ D +EP++ +N V++
Sbjct: 318 VESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCK 377
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + + SG+ P TY + +GK + +M + G + T
Sbjct: 378 NGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYT 437
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK-- 444
+L+ + W+EG+I EA ++ M +R + LC +G+ +A+ +VE
Sbjct: 438 CNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMW 497
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDM 504
I L +F GL+ SS +G C P++ T + ++ +
Sbjct: 498 IHGSAALGNLGNSFIGLVDSSSNG--------------KKCLPDLITYSIIINGLCKAGR 543
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
+A++ F E G L PD Y + + + + V K M
Sbjct: 544 LDEARKKFIEMV-------------GKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDME 590
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 624
GC + L++ + + D + E G P+ + M+ +
Sbjct: 591 KRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIK 650
Query: 625 KAVALINAM 633
A +L++ M
Sbjct: 651 DATSLLDEM 659
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 135/374 (36%), Gaps = 65/374 (17%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+ ++D L + + + + +M SG+ LL G G +A ++L
Sbjct: 367 SFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNIL--- 423
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE--------DCNLYPDIAAYH 268
+ + + + + LL L K GR EA ++ M E CN+ D
Sbjct: 424 HEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVID----- 478
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK---------NWDPVLEPDLVVYNA 319
L + G L E V+++E M S + N+ N L PDL+ Y+
Sbjct: 479 ----GLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCL-PDLITYSI 533
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++N + + F ++ L P + Y + + GK + M K G
Sbjct: 534 IINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
TY L+ + +I E + +M+++G+ Y + CLC GR +DA
Sbjct: 594 CNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDAT 653
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVY 499
+++++ ++ PNI + ++K +
Sbjct: 654 SLLDEM-----------------------------------LQKGISPNISSFRLLIKAF 678
Query: 500 SRNDMFSKAKELFE 513
+ F KE+FE
Sbjct: 679 CKASDFGVVKEVFE 692
>gi|298711148|emb|CBJ32373.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 178/444 (40%), Gaps = 36/444 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G GSW A +++D ++ RD + Y + +AG+ +A M
Sbjct: 238 VVSGYAVDGSWEDASALVDEMFANDVPRD---EYTYCAAMNACKEAGKWMQAAAFLPRMR 294
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
ED + P+ AY++V +G K R+ S R+N L P
Sbjct: 295 ED-GVPPNTIAYNTV---IGACAFFGRPNKAWNNNRETSSFLRPTSTRENKGRGLSP--- 347
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG--KYDLVHEFFR 373
S + +++++ G++P TYG M + G D+V E F
Sbjct: 348 ------AQAEASDAGDFALGLMEEMKREGVEPDIITYGSLMSALSPRGLAGADIVLELFE 401
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME-QRGVVGTASVYYELACCLCNN 432
+AKSG ++TY +RA+ ++G A + M+ + GV Y + L N
Sbjct: 402 TLAKSGLKPNSITYVSAIRAYGDKGDWERAEQMLVGMQKEHGVEPNRFCYSAVVKALANG 461
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV 492
G+W+ A+ +++++ S + +T I + G + + + P +
Sbjct: 462 GQWKRALETLDEMRECGLSAD-PVVYTAAIGACEKFGQWEKALDTLSKLVSEKPPMRSLM 520
Query: 493 ---NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
NA + + K+L T +A+ LKPDEYTY++M+ AS
Sbjct: 521 WGYNAAISALGKAKQMEGIKDLVA-TMKASG------------LKPDEYTYAAMMRASGI 567
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
WE + M +G + ++ + L+ + + + + + E G P
Sbjct: 568 DGSWEESWSMLVEMEQAGVRPNRVVYNTLIASVLKGEQMEKADDILNRMREGGVPPDVTT 627
Query: 610 FTEMLIQAIVQSNYEKAVALINAM 633
+T ++ +S++ +A AL++ M
Sbjct: 628 YTTIMSGCKRESDWRRAEALLSEM 651
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 165/406 (40%), Gaps = 45/406 (11%)
Query: 161 LVDRLSEREMTAKN--WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
L+ LS R + + + + +SGL + ++ GDKG W +A +L G
Sbjct: 381 LMSALSPRGLAGADIVLELFETLAKSGLKPNSITYVSAIRAYGDKGDWERAEQML---VG 437
Query: 219 LKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
++ + ++ +RF Y+ ++ L G+ AL + M E C L D Y + +
Sbjct: 438 MQKEHGVEPNRFCYSAVVKALANGGQWKRALETLDEMRE-CGLSADPVVYTAAIGACEKF 496
Query: 278 G----LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
G L L KL+ +KP M W YNA ++A + Q +G+
Sbjct: 497 GQWEKALDTLSKLVS---EKPP-----MRSLMWG---------YNAAISALGKAKQMEGI 539
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ ++ SGLKP TY M G ++ +M ++G + Y L+ +
Sbjct: 540 KDLVATMKASGLKPDEYTYAAMMRASGIDGSWEESWSMLVEMEQAGVRPNRVVYNTLIAS 599
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ ++ +A + M + GV + Y + W+ A ++ +++S KP
Sbjct: 600 VLKGEQMEKADDILNRMREGGVPPDVTTYTTIMSGCKRESDWRRAEALLSEMESF-GVKP 658
Query: 454 LEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
T T ++ D G ++ +++F Q+ ++ N ++ + D ELF
Sbjct: 659 NSRTLTAVLKVYGDAGEVERALALFEQYDASGMVMDVICFNTLMGPVLKKDDPETVLELF 718
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS--ATAHQWEYF 556
+R S G ++PD T S +L A+ A A +W +
Sbjct: 719 ---SRMESRG----------VEPDSLTMSLVLRAAEQAGAAEWAWL 751
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 149/409 (36%), Gaps = 76/409 (18%)
Query: 229 FVYTKLLAILGKAGRPH-EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y L+A L ++ RPH E L + + M D + PD Y VG++K +
Sbjct: 161 FTYNLLIAALARSRRPHSEVLNLLDQMRCD-GIKPDSYTY---------VGVVKGI---- 206
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEP---DL-VVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
Q P K M D LE DL VY+AV++ W+ + ++ +
Sbjct: 207 ----QGPKKNAM-MRAVLEDAKLELEGLDLSAVYSAVVSGYAVDGSWEDASALVDEMFAN 261
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
+ TY AM ++GK+ F +M + G + Y ++ A G+ N+A
Sbjct: 262 DVPRDEYTYCAAMNACKEAGKWMQAAAFLPRMREDGVPPNTIAYNTVIGACAFFGRPNKA 321
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
NN R E LR + E GL
Sbjct: 322 --------------------------WNNNR--------ETSSFLRPTSTRENKGRGLSP 347
Query: 464 SSMDGGHIDD-CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSK--AKELFEETTRAN 519
+ + D + + + MK + EP+I T +++ S + ELFE ++
Sbjct: 348 AQAEASDAGDFALGLMEEMKREGVEPDIITYGSLMSALSPRGLAGADIVLELFETLAKSG 407
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS-GCQLDQTKHAWL 578
LKP+ TY S + A WE E + GM G + ++ ++ +
Sbjct: 408 -------------LKPNSITYVSAIRAYGDKGDWERAEQMLVGMQKEHGVEPNRFCYSAV 454
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
+ + G+ D + E G P+ +T + +EKA+
Sbjct: 455 VKALANGGQWKRALETLDEMRECGLSADPVVYTAAIGACEKFGQWEKAL 503
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 21/255 (8%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
V M SGL E +++ G GSW ++ S+L ++ +R VY L+A
Sbjct: 542 LVATMKASGLKPDEYTYAAMMRASGIDGSWEESWSML---VEMEQAGVRPNRVVYNTLIA 598
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
+ K + +A I N M E + PD+ Y ++ + R+ +
Sbjct: 599 SVLKGEQMEKADDILNRMREG-GVPPDVTTYTTI---------------MSGCKRESDWR 642
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
R + + + ++P+ AVL + + + +F+Q SG+ + M
Sbjct: 643 RAEALLSEMESFGVKPNSRTLTAVLKVYGDAGEVERALALFEQYDASGMVMDVICFNTLM 702
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+L+ + V E F +M G +LT +++RA + G A + M + G V
Sbjct: 703 GPVLKKDDPETVLELFSRMESRGVEPDSLTMSLVLRAAEQAGAAEWAWLLMEKMREEGGV 762
Query: 417 GTASVYYE--LACCL 429
VY + ACC+
Sbjct: 763 IAMQVYADGIRACCV 777
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 189/500 (37%), Gaps = 65/500 (13%)
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
A + L+ L E + K R M + T LL+G G R A++
Sbjct: 67 ASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALA--- 123
Query: 215 WVYGLKDKRDLKSRF---VYTKLLAILG----KAGRPHEALRIFNLMLEDCNLYPDIAAY 267
L+D R S Y +L L A R +A+ F M + + PD+ +Y
Sbjct: 124 ---HLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEM-KASGVEPDLESY 179
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
H + L G + E L M PD++ YN +++
Sbjct: 180 HILLSALSDSGRMAEAHALFSAM------------------TCSPDIMTYNVLMDGYCKI 221
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
Q + K++ K+G +P+ TY + + + K + E F KM +S A+T+
Sbjct: 222 GQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTF 281
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN-GRWQDAMLVVEKIK 446
L+ F + G + +A+ ME+ G T Y L LC G A+ + K++
Sbjct: 282 NTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLE 341
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFS 506
+ P +T+ LI D + + + F M+ C PN+ T + ++ +
Sbjct: 342 GAGLT-PTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRMK 400
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+A + E+ + GYT P TY ++ + + ++ M L+
Sbjct: 401 EAAKTLEDM---KAHGYT----------PTVVTYGGLINGFCKCGELKSALLFFEKMKLA 447
Query: 567 GCQLDQTKHAWL---LVEASRAGK-----CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
GC + L L +A RA CH+ HA G P + + LI +
Sbjct: 448 GCAPNTVIFNTLIDGLCKAERANDGLRLLCHM--HA------EGCKPDVITY-NCLISGL 498
Query: 619 VQSN-YEKAVALINAMAYAP 637
+N E A L + MA AP
Sbjct: 499 CSANRVEDAQRLFDGMACAP 518
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 139/347 (40%), Gaps = 55/347 (15%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
+ P+ YN ++ Q VF ++ SGL P+A+T + + + G+
Sbjct: 27 LFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSA 86
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
+ FR+M + ++ +L+R F+ G++ +A+A +++M + Y +
Sbjct: 87 LKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKG 146
Query: 429 LC----NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
LC + R + AM +++K+ LE ++ L+ + D G + + ++F M
Sbjct: 147 LCWENKSANRLEQAMEFFKEMKASGVEPDLE-SYHILLSALSDSGRMAEAHALFSAMT-- 203
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
C P+I T N ++ Y + +A+ L +E +A GY +P+ +TYS ++
Sbjct: 204 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA---GY----------EPNVFTYSIII 250
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
C+LD+ + AW F ++E+ +
Sbjct: 251 NCY--------------------CKLDKVEEAW---------------EVFMKMIESNCV 275
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
P+ + F ++ E A+ L M T + L +S
Sbjct: 276 PNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDS 322
>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 674
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 157/376 (41%), Gaps = 41/376 (10%)
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT 232
K K +R M + G++ ++ G G W A+S+LD + D +
Sbjct: 198 KAVKLLRTMRRDGILPVTVTYNTVISACGKSGQWSLAVSLLD---EMSDMGCPPGPVTFA 254
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+ +A + H LRI + M ED ++ D AY + GQ+G V+ ++ M
Sbjct: 255 SAMLACERARQWHHVLRIMDQMQED-EVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDS 313
Query: 293 KP-SKRIKNMH--------RKNW-----------DPVLEPDLVVYNAVLNACVPSHQWKG 332
+K + + + W D L P+++ Y +++ Q +
Sbjct: 314 NGVAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHER 373
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+ +R G+ P+ TY +A+ + ++ ++M + G + ++Y +R
Sbjct: 374 AIKILDLMRSKGVMPNVRTYSVAIAACADAKEWRRALALLKEMEREGVSPNEISYNTAIR 433
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
A + G+++EA+ + ME RGV + V Y A C R D + +E + ++R +
Sbjct: 434 ACGDAGQLSEALDLMDEMESRGVKASV-VTYGTAVAACQ--RAADWKMALELLAAMRREQ 490
Query: 453 --PLEITFTGLIISS----------MDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKV 498
P EI + G+I + +D I++ I +F + + +C I + ++
Sbjct: 491 IEPNEIVYGGIIKACCAAGQASKALVDADQIEEAIQLFNKLQARRNCSVTIHSYTPLVDA 550
Query: 499 YSRNDMFSKAKELFEE 514
+R + +A LF+E
Sbjct: 551 LTRELRWQEAIMLFQE 566
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 181/489 (37%), Gaps = 94/489 (19%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ A + A IF M ++ + P++ Y ++ + G ++ V +E+M
Sbjct: 112 YNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWEDSVNYLEQM 171
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RQ L P+ V+Y+ V++AC S QW+ + + +R+ G+ P
Sbjct: 172 RQSG---------------LAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTV 216
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT------------------------ 386
TY + +SG++ L +M+ G G +T
Sbjct: 217 TYNTVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQM 276
Query: 387 -----------YKVLVRAFWEEGKINEAVAAVRNMEQRGVV-GTASVYYELACCLCNNGR 434
Y + A + GK V + M+ GV +V ++ C + G+
Sbjct: 277 QEDEVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISAC-ADKGQ 335
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
W A ++E + P IT+T L++ GG + I I M+ PN+ T +
Sbjct: 336 WAQAEKLLEDMLD-DGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYS 394
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+ + + +A L +E R S P+E +Y++ + A A Q
Sbjct: 395 VAIAACADAKEWRRALALLKEMEREGVS-------------PNEISYNTAIRACGDAGQL 441
Query: 554 E--------------YFEYVYKGMALSGCQLDQT-KHAWLLVEASRAGKCHLLEHAFDSL 598
V G A++ CQ K A L+ A R + E + +
Sbjct: 442 SEALDLMDEMESRGVKASVVTYGTAVAACQRAADWKMALELLAAMRREQIEPNEIVYGGI 501
Query: 599 LE----AGEIPHPLFFTEMLIQAIVQSNYEKAV--ALINAMAYAPF---HITERQWTE-- 647
++ AG+ L + + +AI N +A + +Y P E +W E
Sbjct: 502 IKACCAAGQASKALVDADQIEEAIQLFNKLQARRNCSVTIHSYTPLVDALTRELRWQEAI 561
Query: 648 -LFESNEDR 655
LF+ EDR
Sbjct: 562 MLFQEMEDR 570
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 133/327 (40%), Gaps = 14/327 (4%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYD 366
P +EP++V YN V+ AC + + K +F+++ K G++P+ TYG + + G ++
Sbjct: 103 PAVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWE 162
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ +M +SG A A+ Y ++ A + +AV +R M + G++ Y +
Sbjct: 163 DSVNYLEQMRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNTVI 222
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 486
+G+W A+ +++++ + P +TF +++ + I M++
Sbjct: 223 SACGKSGQWSLAVSLLDEMSDM-GCPPGPVTFASAMLACERARQWHHVLRIMDQMQED-- 279
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+V+ ++ A + + D + D T S + A
Sbjct: 280 ----------EVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISA 329
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
A QW E + + M G + + L+V R G+ D + G +P+
Sbjct: 330 CADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPN 389
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAM 633
++ + + +A+AL+ M
Sbjct: 390 VRTYSVAIAACADAKEWRRALALLKEM 416
>gi|297808589|ref|XP_002872178.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318015|gb|EFH48437.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 176/424 (41%), Gaps = 52/424 (12%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG---QVGL 279
R ++SR TKL+ +L + GRPHEA +F + E + P + +Y ++ + Q G
Sbjct: 37 RTVRSR---TKLMNVLIERGRPHEAQTVFKTLAETGH-RPSLISYTTLLAAMTVQKQYGS 92
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L +V +E+ KP D + +NAV+NA S + +
Sbjct: 93 LSSIVSEVEQSGTKP------------------DSIFFNAVINAFSESGNMEDAVQALLK 134
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA---IGALTYKVLVRAFWE 396
+++ GL P+ +TY ++ +GK + M + T+ VLV+A+ +
Sbjct: 135 MKELGLNPTTSTYNTLIKGYGIAGKPERSSALLDLMLEESNVDVRPNIRTFNVLVQAWCK 194
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLE 455
+ K+ EA V ME+ GV Y +A C G A VVEK+ +KP
Sbjct: 195 KKKVEEAWEVVHKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 254
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI----GTVNAMLKVYSRNDMFSKAKE 510
T ++ G + D + + MK+ E N+ +N ++V R D +
Sbjct: 255 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR-DGIDEVLT 313
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
L +E +K D TYS+++ A ++A E V+K M +G +
Sbjct: 314 LMKECN----------------VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 357
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
D ++ L RA + E ++L+ P+ + FT ++ + + A+ +
Sbjct: 358 DAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSSGSMDDAMRVF 416
Query: 631 NAMA 634
N M
Sbjct: 417 NKMC 420
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 155/390 (39%), Gaps = 76/390 (19%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILG 239
M + GL T L+KG G G ++ ++LD + + D++ + L+
Sbjct: 135 MKELGLNPTTSTYNTLIKGYGIAGKPERSSALLDLMLE-ESNVDVRPNIRTFNVLVQAWC 193
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-LLKELVKLIERM----RQKP 294
K + EA + + M E+C + PD Y+++A Q G ++ +++E+M + KP
Sbjct: 194 KKKKVEEAWEVVHKM-EECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKP 252
Query: 295 SKRIKNMH-----------------RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+ R + R+ + +E +LVV+N+++N V G+ V
Sbjct: 253 NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVL 312
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+++ +K TY M +G + + F++M K+G A Y +L + +
Sbjct: 313 TLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY--- 369
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
VR E + A E L+VE S+P +
Sbjct: 370 ---------VRAKEPK----KAEELLE--------------TLIVE-------SRPNVVI 395
Query: 458 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
FT +I G +DD + +F M K PNI T ++ Y KA+E+ +
Sbjct: 396 FTTVISGWCSSGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQ--- 452
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ G G +KP+ T+ + EA
Sbjct: 453 --------MMRGFG--VKPENSTFLLLAEA 472
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/465 (20%), Positives = 179/465 (38%), Gaps = 40/465 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+ +E M K ++ R M GL+ + + ++KGL + W+ A+S+
Sbjct: 322 VLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL------F 375
Query: 220 KDKRD--LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
K+ D + F Y L+ L + + EAL ++ M E + P I YHS+ +
Sbjct: 376 KEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNET-GVKPYIVTYHSLLLCYCVN 434
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + E VKL M P K P++V Y ++ + + + +
Sbjct: 435 GCMDEAVKLYTEM---PGKG------------FTPNVVTYTTLMKGHINKAAFDKAYALL 479
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+++++G+ + TY + + G+ V E ++ G A+TY ++ F +
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
G + A A + M +G+ Y C A+ ++ ++ + +P
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC-KGLRPDIAA 598
Query: 458 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+ LI G++ + + M KD PNI N+ + Y M +A +E+
Sbjct: 599 YNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMI 658
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
+ +G L D TY+++++ + + +Y M G D
Sbjct: 659 K-----------EGIDL--DTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFT 705
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
L R G D + P+ L + MLI +++
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY-NMLINGYLRN 749
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 163/434 (37%), Gaps = 52/434 (11%)
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM- 301
+AL IF L D L P Y + + G+ ++ +L +MR PS NM
Sbjct: 300 KALDIFEETLRD-GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358
Query: 302 -----HRKNWDPVLE----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ K W + PD YN +++ + + +++++ ++G+K
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK 418
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P TY + +G D + + +M G +TY L++ + ++A A
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYAL 478
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M+Q GV Y L LC GR + ++++ ++ P +T+ +I +
Sbjct: 479 LAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET-EGFVPTAMTYNSIINGFI 537
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR-----------NDMFSKAKELFEE 514
G + +++Q M PNI T + + Y + ND+ + K L +
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDV--RCKGLRPD 595
Query: 515 TTRANSSGYTF---------------LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
NS Y F + DG L P+ Y+S + E
Sbjct: 596 IAAYNSLIYGFCQEGNMSHALQVLVLMLKDG--LLPNISVYNSFITGYKNLKMMEEALRF 653
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
Y+ M G LD + L+ S+ G + ++ G IP + FT +
Sbjct: 654 YEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713
Query: 620 QSNYEKAVALINAM 633
+ + A L++ M
Sbjct: 714 NGDIDDARKLLDEM 727
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 114/309 (36%), Gaps = 20/309 (6%)
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT 232
K + + M Q+G+ + L+ GL G + V + + + + + + Y
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVG---RVCEVGEMLKRFETEGFVPTAMTYN 530
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
++ KAG A ++ M + P+I Y S + +K++ +R
Sbjct: 531 SIINGFIKAGMMGSAFAVYQQMCAK-GIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC 589
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
K L PD+ YN+++ V + K GL P+ + Y
Sbjct: 590 KG---------------LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ + F+ KM K G + TY L+ F ++G + A+ M
Sbjct: 635 NSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVA 694
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+G + + L LC NG DA +++++ L +P + + LI + G +
Sbjct: 695 KGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRL-DIRPNVLMYNMLINGYLRNGKLQ 753
Query: 473 DCISIFQHM 481
+ + M
Sbjct: 754 EAFRLHDEM 762
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 16/245 (6%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
RK D P +N+V++ V + + + +L +G K S M
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+ + F + + G +TY VL+R EEG +A R M G++ + + +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
+ L N+ W+DA+ + +++ P T+ LI I + +++++ M
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMAD--SGIPDAFTYNILIHWLCQRRKIREALNLWEKMN 413
Query: 483 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
+ +P I T +++L Y N +A +L YT + G G P+ TY+
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKL-----------YTEMPGKG--FTPNVVTYT 460
Query: 542 SMLEA 546
++++
Sbjct: 461 TLMKG 465
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 136/346 (39%), Gaps = 33/346 (9%)
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M G + A + V++RA ++EG ++AV M + V LC
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-----EPN 488
A+LV+ K++ P + TF ++ + GG +++ + H+KD + +
Sbjct: 227 DANRALLVLRKMQDAGFV-PWDFTFNSVVDVLVKGGRMEEAL----HIKDELLATGKKMS 281
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYTFL----SGDGAP-------- 532
+ ++ Y KA ++FEET R YT L + +G P
Sbjct: 282 VVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCR 341
Query: 533 ------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
L P ++ +++ W+ ++K MA SG D + L+ +
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRR 400
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
K + ++ + E G P+ + + +L+ V ++AV L M F +T
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460
Query: 647 ELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
L + + ++ + DK LL + + ++ T + L L + R
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGR 506
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/477 (19%), Positives = 192/477 (40%), Gaps = 78/477 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL---KELVKLI 287
YT ++ + K + E RI + M+E L P + Y+++ + G++ +E++ L+
Sbjct: 112 YTVMINAMCKETKLEEGRRILDEMVEK-GLVPSVPTYNALIDGYCKEGMVEAAQEILDLM 170
Query: 288 ERMRQKPSKRI-----------KNMHR------KNWDPVLEPDLVVYNAVLNACVPSHQW 330
P++R KN+HR K + L P +V YN++++
Sbjct: 171 HSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYL 230
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ + + ++G+ P TY + ++ + + G+ + + F + + G + Y L
Sbjct: 231 DSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTAL 290
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSL 448
+ + + GK+++A + + M + +S Y L LC + Q+A+L++E + K L
Sbjct: 291 IDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGL 350
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ + P T+T LI++ + G D I M +P++ A + + +
Sbjct: 351 KCTVP---TYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKE 407
Query: 508 AKEL----FEETTRANSSGYTFL----SGDG--------------APLKPDEYTYSSMLE 545
A+++ FE ++ YT + G G P +TYS +++
Sbjct: 408 AEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIK 467
Query: 546 A------------------------SATAHQWEYFEY-----VYKGMALSGCQLDQTKHA 576
+ A W+ ++ +++ M GC + +A
Sbjct: 468 HLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYA 527
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
L++ + G+ + + FD + E G P + +L Y AV L+ AM
Sbjct: 528 KLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAM 584
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 161/433 (37%), Gaps = 67/433 (15%)
Query: 216 VYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
V+ + K+ + V YT L+ L + GR E + IF M ED + YP + Y + L
Sbjct: 26 VFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMRED-DCYPTVRTYTVIVHAL 84
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G E + L MR++ EP++ Y ++NA + +
Sbjct: 85 FESGRRMEAINLFSEMRERGC---------------EPNIHTYTVMINAMCKETKLEEGR 129
Query: 335 WVFKQLRKSGLKPSAATY-----GLAMEVMLQSGK--YDLVHE----------------- 370
+ ++ + GL PS TY G E M+++ + DL+H
Sbjct: 130 RILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGF 189
Query: 371 -----------FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
KM +S +TY L+ + G ++ A + M + GVV
Sbjct: 190 CRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQ 249
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y LC GR ++A ++ +K + K E+ +T LI G +DD S+
Sbjct: 250 WTYSVFIDTLCKKGRIEEANVLFNSLKE-KGIKANEVIYTALIDGYCKAGKMDDANSLLD 308
Query: 480 HM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M + C PN T NA++ + +A L E + LK
Sbjct: 309 RMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG-------------LKCTVP 355
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
TY+ ++ A ++Y + M SG Q D + + G E +
Sbjct: 356 TYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMM 415
Query: 599 LEAGEIPHPLFFT 611
E G +P L +T
Sbjct: 416 FERGVMPDALTYT 428
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/413 (18%), Positives = 156/413 (37%), Gaps = 42/413 (10%)
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+ A +FN+M + + +Y ++ L +VG + E + + ++MR+
Sbjct: 21 NSAFSVFNMMPKK-GCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCY-------- 71
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
P + Y +++A S + +F ++R+ G +P+ TY + + M + K
Sbjct: 72 -------PTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETK 124
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
+ +M + G TY L+ + +EG + A + M Y E
Sbjct: 125 LEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNE 184
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
L C C AM ++ K+ R + P +T+ LI G++D + M ++
Sbjct: 185 LICGFCRKKNVHRAMALLSKMLESRLT-PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNEN 243
Query: 485 -CEPNIGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYTFLSGDG--------- 530
P+ T + + + +A LF E+ +AN YT L DG
Sbjct: 244 GVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALI-DGYCKAGKMDD 302
Query: 531 ----------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
P+ TY+++++ + + + + M G + + L+V
Sbjct: 303 ANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIV 362
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ G D ++ +G P +T + + N ++A +++ M
Sbjct: 363 AMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMM 415
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 30/305 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + M Q GL T L+ + +G + A +LD +
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSG 384
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ ++YT + G EA + ++M E + PD Y V G +GLL
Sbjct: 385 YQPDV---YIYTAFIHAFCTRGNIKEAEDMMSMMFER-GVMPDALTYTLVIDAYGGLGLL 440
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+++RM +D +P Y +C+ H K + K+
Sbjct: 441 NPAFDVLKRM---------------FDTGCDPSHHTY-----SCLIKHLLKE--ELTKKY 478
Query: 341 RKSGLKPSAATYGLA-MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ L S A + + + K++ E F KM + G + TY L+ + G+
Sbjct: 479 KNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGR 538
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE---I 456
+ A +M +RGV + ++Y L C C G + DA+ +V + H LE +
Sbjct: 539 LGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNV 598
Query: 457 TFTGL 461
F GL
Sbjct: 599 LFCGL 603
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 168/399 (42%), Gaps = 55/399 (13%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R ++T ++ L KA R EA +F M E C PD AY+++ L + G +E +K++
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 288 ERMRQKPS--------------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ M K +R + + R P+ V+Y ++++ S
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ K +F ++ ++G +P T+ + ++ + +SG ++ + F +M + G +TY
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+++ + G++ A ++ M G + Y L C GR +A +++++
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCI-SIFQHMKDHCEP-NIGTVNAMLKVYSRNDMF 505
S L++ ++ L+ DGG ++ + +F+ K E + G +++ +
Sbjct: 464 CSSSPNLQL-YSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRL 522
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML------------EASATAHQW 553
+A +F+ R S G KPD TY+ ++ A A H
Sbjct: 523 DEACRIFQ---RMVSEG----------CKPDATTYNILINGLCRSRENRVERAFALLHDL 569
Query: 554 EYFEYV-----YKGMALSGCQLDQTKHAW-LLVEASRAG 586
E Y+ Y + + C++ + A +L EAS G
Sbjct: 570 EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 107/525 (20%), Positives = 200/525 (38%), Gaps = 93/525 (17%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LV+ L + + + R+M SG L+ G G ++A S+ D +
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 220 KDKRDLKSRFV--------------------------------YTKLLAILGKAGRPHEA 247
+ D+ + V YT ++ L K GR A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
RI M+ +PD Y + ++G L E +L++ + + S
Sbjct: 420 FRIMKGMIAH-GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS------------ 466
Query: 308 PVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSG--LKPSAATYGLAMEVML---Q 361
P+L +Y++++N C K + +F+Q + + L P GL +++ +
Sbjct: 467 ---SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDP-----GLCCSIIVGLCK 518
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW--EEGKINEAVAAVRNMEQRGVVGTA 419
+G+ D F++M G A TY +L+ E ++ A A + ++E+ G + A
Sbjct: 519 TGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDA 578
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y L LC G A+ ++E+ S R + +T L G +D +S+FQ
Sbjct: 579 VTYTPLCIGLCKIGEVDRAVKMLEEASS-RGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637
Query: 480 HM-KDHCEPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
M + P+ +N ++KV D A + F+E G K
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKVKKLED----ACKFFDEMI-------------GKGQK 680
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE-- 592
P TY+++++A A + + ++ M G + + ++ +A G C L+
Sbjct: 681 PTVATYTALVQALCHAGNVDEAFHRFESMLARG----ELVGSVMIYDALIHGFCKALKVD 736
Query: 593 ---HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
F+ ++ G +P + + + EKA L+ MA
Sbjct: 737 AALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 24/328 (7%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
G ++ GL G +A + + K D + Y L+ L ++ R + R
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATT---YNILINGLCRS-RENRVERA 562
Query: 251 FNLM--LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
F L+ LE PD Y + + L ++G + VK++E + W+
Sbjct: 563 FALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR-----------GWNA 611
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
D+V Y A+ Q +F+++ + G P AA Y + +++ K +
Sbjct: 612 ----DVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDA 667
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG-VVGTASVYYELAC 427
+FF +M G+ TY LV+A G ++EA +M RG +VG+ +Y L
Sbjct: 668 CKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIH 727
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
C + A+ + E + S R + P +T L + G + + Q M
Sbjct: 728 GFCKALKVDAALKLFEDMIS-RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSP 786
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEE 514
P+ T A+L ++D K +L +E
Sbjct: 787 PHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/462 (19%), Positives = 169/462 (36%), Gaps = 80/462 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + L+ + R +A+ F +M PD+ + + L + G
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAG---------- 203
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K + M + P PD ++ A++ + + + K VF Q+ K G P
Sbjct: 204 -MDEKAFEVFHEMMAMGFVP---PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259
Query: 349 A-----------------------------------ATYGLAMEVMLQSGKYDLVHEFFR 373
A TYG+ + + ++G + E FR
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
MA SG ++ Y L+ F + G++ EA + M + G + + LC +G
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
++ A E++ KP +T+T +I G + + I + M H C P+ T
Sbjct: 380 NFEQAAKSFEEMMR-GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTY 438
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+L + + +A +L +E + +SS P+ YSS++
Sbjct: 439 ICLLDGFCKLGRLDEAAQLLDELDKCSSS-------------PNLQLYSSLVNGLCDGGS 485
Query: 553 WE-YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
E + +++ + LD ++V + G+ F ++ G P +
Sbjct: 486 VEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545
Query: 612 EMLIQAIVQS---NYEKAVALI----------NAMAYAPFHI 640
+LI + +S E+A AL+ +A+ Y P I
Sbjct: 546 -ILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 116/286 (40%), Gaps = 14/286 (4%)
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
++G + TY M +++ Y + +M K+G A ++ +L+R+F + +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+AV M+++ + L CLC G + A V ++ ++ P T +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231
Query: 462 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
+ + + + + +F M K P+ N M+ ++ +A ++ +
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML---- 287
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
P E TY ++ + A E E +++ MA SG + + + L+
Sbjct: 288 ---------AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
+++G+ FD ++EAG P + T M+ N+E+A
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 131/311 (42%), Gaps = 21/311 (6%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+H + + P+ +N ++ + + + F+ +++ KP T+ + ++ +
Sbjct: 141 IHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLC 200
Query: 361 QSGKYDLVHEFFRKMAKSG-EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++G + E F +M G + +VR + ++ EA ME+ G A
Sbjct: 201 KAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDA 260
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y + L G Q+A+ V++ + + + P E+T+ L+ S G ++ +F+
Sbjct: 261 IAYNTMIDGLAKAGHAQEALKVLDNMLA-KACVPTEVTYGILVNSLCKAGTLERAEELFR 319
Query: 480 HMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M PN +++ ++++ +A LF+E A GY +PD
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA---GY----------RPDVI 366
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
T++ M++ + +E ++ M GC+ + + ++ S+ G+ + +AF
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR---VANAFR-- 421
Query: 599 LEAGEIPHPLF 609
+ G I H F
Sbjct: 422 IMKGMIAHGCF 432
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 38/292 (13%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
++PD ++++ L G +KE V+L M +K H EP+++ Y
Sbjct: 159 IHPDAITFNALINGLCNEGKIKEAVELFNEM-------VKRGH--------EPNVISYTT 203
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
V+N + VFK++ ++G KP+ TY ++ + + + EF +M + G
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERG 263
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
TY +V F G++NEA + M R V+ + L LC G +A
Sbjct: 264 IPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEAR 323
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS----IFQHM-KDHCEPNIGTVNA 494
LV E + + +P T+ L MDG + ++ +F+ M + C P + N
Sbjct: 324 LVFETMTE-KGVEPDISTYNAL----MDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNI 378
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
++ Y ++ +AK L E L PD TYS++++
Sbjct: 379 LINGYCKSRRMDEAKSLLAEMYH-------------KALNPDTVTYSTLMQG 417
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 151/353 (42%), Gaps = 36/353 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
++ GL G+ A+ V + ++ K V Y+ ++ L K ++A+ + M
Sbjct: 204 VINGLCKTGNTSMAVDVFKKM----EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEM 259
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E + P++ Y+S+ +G L E +L + M + + P+
Sbjct: 260 VER-GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD---------------VMPNT 303
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V + +++ VF+ + + G++P +TY M+ + + F
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G A GA +Y +L+ + + +++EA + + M + + Y L LC GR
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 493
++A+ + +++ S P +T+ L+ GH+D+ + + + MK+ EPNI
Sbjct: 424 PKEALNLFKEMCSY-GPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYT 482
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+++ AKELF + L GDG +PD TY+ M++
Sbjct: 483 ILIEGMFIAGKLEVAKELFSK-----------LFGDGT--RPDIRTYTVMIKG 522
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 94/234 (40%), Gaps = 15/234 (6%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V ++ K G+ P A T+ + + GK E F +M K G ++Y ++
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G + AV + MEQ G Y + LC + DAM + ++ R P
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVE-RGIPPNV 268
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+ ++ + G +++ +F+ M PN T ++ + M S+A+ +FE
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
T ++PD TY+++++ + V++ M GC
Sbjct: 329 MTEKG-------------VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGC 369
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L PD Y ++ L Q+G KE + L + M ++ P P+LV Y
Sbjct: 404 LNPDTVTYSTLMQGLCQLGRPKEALNLFKEM-------------CSYGP--HPNLVTYVI 448
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+L+ + K +++ L+P+ Y + +E M +GK ++ E F K+ G
Sbjct: 449 LLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDG 508
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
TY V+++ +EG +EA R ME G + + Y + N A+
Sbjct: 509 TRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 568
Query: 440 LVVEKIKSLRHSKPLEITFTGLI 462
+++++ R S L TF L+
Sbjct: 569 RLIDEMVGKRFSVNLS-TFQMLL 590
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 191/465 (41%), Gaps = 72/465 (15%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
FT Q+L L+ D+ + A+ +L W + R S +Y ++L LGK G +
Sbjct: 52 FTPAQLLDTLRRQNDETA---ALRLLSWASKQPNFRPNSS--IYEEILRKLGKVGSFNSM 106
Query: 248 LRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS----------- 295
I M DC + D + + L +E++ ++E M +
Sbjct: 107 KDILQEMKGLDCQI--DRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFL 164
Query: 296 ----------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
K ++N+H ++PD+ +N ++ A +HQ + V +++ GL
Sbjct: 165 LNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGL 224
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P T+ M+ ++ G D +M +G + +T VLV F +EG+I EA++
Sbjct: 225 VPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALS 284
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M N G+ A+ + ++K+ + +P E T+ LI S
Sbjct: 285 FIDEMS-------------------NEGKHTMAIELYNEMKN-KGCQPDEFTYNMLIDSL 324
Query: 466 MDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET-----TRAN 519
G + + + + + M+ C N+ T N ++ + +N +A+E+F++ +R +
Sbjct: 325 CYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNS 384
Query: 520 SSGYTFLSG--------DGAP---------LKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+ T + G + A LKPD++TY+SML + + +
Sbjct: 385 VTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQT 444
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
M +GC+ D + L+ +AG+ + S+ G + P
Sbjct: 445 MTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTP 489
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 111/275 (40%), Gaps = 24/275 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW--VY 217
+L+D L R + +R M SG L+ G +A + D +
Sbjct: 319 MLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQ 378
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
GL ++ Y L+ L K+ R EA ++ + M+ + L PD Y+S+ +
Sbjct: 379 GLS-----RNSVTYNTLIDGLCKSRRVQEAAQLMDQMIME-GLKPDKFTYNSMLTYFCRE 432
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G +++ +++ M EPD+V Y ++ + + + +
Sbjct: 433 GDIQKAADIVQTMTSNGC---------------EPDIVTYGTLIGGLCKAGRVEVASRLL 477
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+ ++ G+ + Y ++ + + + FR+M + G A TYK++ R
Sbjct: 478 RSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNS 537
Query: 398 G-KINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
G I EAV V M ++G + S +Y LA LC+
Sbjct: 538 GGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCS 572
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 199 GLGDKGSWRQAMSVLDWVYG-------------LKDKRDLKSRFVYTKLLAILGKAGRPH 245
G +G +A+S +D + +K+K F Y L+ L G+
Sbjct: 272 GFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQ 331
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
EAL + M E ++ Y+++ + ++E ++ ++M I+ + R +
Sbjct: 332 EALGLLREM-EISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQME------IQGLSRNS 384
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
V YN +++ S + + + Q+ GLKP TY + + G
Sbjct: 385 ---------VTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDI 435
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+ + M +G +TY L+ + G++ A +R+++ +G+V T Y +
Sbjct: 436 QKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPV 495
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKP----LEITFTGLIISSMDGGHIDDCISIFQHM 481
L R ++AM + +++ + + P +I F GL S GG I + + M
Sbjct: 496 IQALFKRKRTKEAMRLFREMEE-KGNTPDAFTYKIVFRGL---SNSGGPIGEAVDFVIEM 551
>gi|255661020|gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 376
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 127/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L D VVYN +LN + K F +++ + K G + + A++ + M + +GK D V
Sbjct: 21 LSLDAVVYNTMLNGFFRVGRIKDCFELWELMGKEGSR-NVASFNIMMRGLFNNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KSG ++TY +LV F + G +N+++ + E +G V A Y + L
Sbjct: 80 LIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEIAEMKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
C + + A+ V+ IKS KP + LI + +D I +FQ M HC P
Sbjct: 140 CKDSKLDKAVSVLNGMIKS--GCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTHCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ + + F +A +L +E G+ P TYS +++
Sbjct: 198 TIITYNTLINGLCKGERFGEAYDLVKEMLE---KGWN----------PCVITYSMLIKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFD 294
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D Y+++ +VG +K+ +L E M ++ S+ + + +N ++
Sbjct: 24 DAVVYNTMLNGFFRVGRIKDCFELWELMGKEGSRNVAS----------------FNIMMR 67
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+ + V +++ ++KSG + TYG+ + ++G + G +
Sbjct: 68 GLFNNGKVDEVILIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEIAEMKGGVL 127
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
A Y ++ ++ K+++AV+ + M + G A VY L L + +++DA+ V
Sbjct: 128 DAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVF 187
Query: 443 EKIKSLRHSKPLEITFTGLI 462
+++ S H P IT+ LI
Sbjct: 188 QEMGS-THCSPTIITYNTLI 206
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 188/476 (39%), Gaps = 43/476 (9%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + G + TE + L++GL KG + + D V +K + S FVY L+ L K
Sbjct: 322 MIELGFVPTEAALSSLVEGLRRKG---KVVDAFDLVNRVKKVGAMPSLFVYNALINSLCK 378
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK------- 293
G+ EA +F M E L + Y + + + G L + + +M
Sbjct: 379 DGKFDEAELLFKEMGEK-GLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVY 437
Query: 294 PSKRIKNMHRK-------------NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
P + N H K D L+P +V Y ++++ + F ++ ++
Sbjct: 438 PYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
G+ P+ T+ + + ++ + F +M + +TY V++ +EG
Sbjct: 498 TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNT 557
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+A + M Q+G+V Y L LC+ GR +A ++ + H K E+ ++
Sbjct: 558 VKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR-EHFKLNEMCYSA 616
Query: 461 LIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
L+ G + D +G M+K D+ A L + T +
Sbjct: 617 LLHGYCKEGRLRD--------------ALGVCREMVKRGVDMDLVCYAV-LIDGTIKEQD 661
Query: 521 SGYTF---LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+ F + L+PD+ Y+SM++ + A + ++ M GC + +
Sbjct: 662 TSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTT 721
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
L+ E +AG E + +L + P+ + + L + + EKAV L N M
Sbjct: 722 LINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM 777
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 142/342 (41%), Gaps = 36/342 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV-------GLLKE 282
VY L+ L K R EA+ I N +++ L Y ++ + L +V G++ E
Sbjct: 263 VYNVLIHGLCKNKRVWEAVEIKNGLIQK-GLTASEVTYCTLVLGLCKVQEFEVGAGVMDE 321
Query: 283 LVKL-IERMRQKPSKRIKNMHRKN-----WDPV-------LEPDLVVYNAVLNACVPSHQ 329
+++L S ++ + RK +D V P L VYNA++N+ +
Sbjct: 322 MIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGK 381
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+ +FK++ + GL + TY + ++ + GK D F KM +G I Y
Sbjct: 382 FDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNS 441
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ + G ++ AV+ M +G+ T Y L CN G+ +A + ++ +
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG-K 500
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 508
P TFT LI + + D +F M + + PN T N M++ + + KA
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKA 560
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
EL + + L PD YTY ++ + +
Sbjct: 561 FELLNQMVQKG-------------LVPDTYTYRPLISSLCST 589
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/306 (17%), Positives = 119/306 (38%), Gaps = 17/306 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P + VLN + V +F ++ G++P Y + + +
Sbjct: 189 LMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAK 248
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E ++M S + + Y VL+ + ++ EAV + Q+G+ + Y L L
Sbjct: 249 EMIQRMESSD--LNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGL 306
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C ++ V++++ L P E + L+ G + D + +K P+
Sbjct: 307 CKVQEFEVGAGVMDEMIELGFV-PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPS 365
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ NA++ ++ F +A+ LF+E L ++ TYS ++++
Sbjct: 366 LFVYNALINSLCKDGKFDEAELLFKEMGEKG-------------LCANDVTYSILIDSFC 412
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + + M ++G ++ + L+ + G FD +++ G P +
Sbjct: 413 RRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVV 472
Query: 609 FFTEML 614
+T ++
Sbjct: 473 SYTSLI 478
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 158/388 (40%), Gaps = 41/388 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V+++ + T K ++ + M Q GL+ L+ L G +A +D ++
Sbjct: 546 VMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHRE 605
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K + Y+ LL K GR +AL + M++ + D+ Y AV + G
Sbjct: 606 HFKLN---EMCYSALLHGYCKEGRLRDALGVCREMVKR-GVDMDLVCY---AVLID--GT 656
Query: 280 LKELVKLIERMRQKPSK---RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
+KE Q S +KNMH D L PD V+Y ++++ + K F +
Sbjct: 657 IKE---------QDTSAVFGLLKNMH----DQRLRPDKVIYTSMIDGYSKAGSVKKAFGI 703
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
+ + G P+ TY + + ++G D +++M S +TY +
Sbjct: 704 WDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAR 763
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
EG + +AV +M +G++ Y L C GR ++A +++++ P I
Sbjct: 764 EGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMID-NAIFPDCI 821
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T++ +I G++D I + M + +P+ N ++ KA EL ++
Sbjct: 822 TYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDM 881
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSM 543
R +KP++ T+ S+
Sbjct: 882 IRRG-------------VKPNQATHKSL 896
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 138/362 (38%), Gaps = 35/362 (9%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F+ +R+ L P T G + + + + D+V F ++ G Y ++R+F
Sbjct: 180 IFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFC 239
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKP 453
E +A ++ ME + VY L LC N R +A+ + + K L S
Sbjct: 240 ELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTAS-- 295
Query: 454 LEITFTGLIIS-------SMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFS 506
E+T+ L++ + G +D+ I + P ++++++ R
Sbjct: 296 -EVTYCTLVLGLCKVQEFEVGAGVMDEMIEL------GFVPTEAALSSLVEGLRRK---G 345
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
K + F+ R G P + Y++++ + +++ E ++K M
Sbjct: 346 KVVDAFDLVNRVKKVGAM----------PSLFVYNALINSLCKDGKFDEAELLFKEMGEK 395
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEK 625
G + ++ L+ R GK H ++ AG I ++ LI + N
Sbjct: 396 GLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAG-IKITVYPYNSLINGHCKLGNLSA 454
Query: 626 AVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSR 685
AV+ + M T +T L ++ + +L + + A + T + L
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514
Query: 686 AL 687
AL
Sbjct: 515 AL 516
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 144/354 (40%), Gaps = 30/354 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI +S+ + + V L+++M + K PD V + ++
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK---------------PDTVTFTTLI 190
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ ++ + ++ + G +P TYG + + + G DL KM +
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+ Y ++ + + ++A+ ME +GV Y L CLCN GRW DA +
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
+ + R P +TF+ LI + + G + +++ M K +PNI T ++++ +
Sbjct: 311 LSDMIE-RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
D +AK++ E R + P+ TY++++ A + + ++
Sbjct: 370 MLDRLGEAKQMLELMIRKDC-------------LPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ M+ G + + L+ +A C + F ++ G P+ L + +L
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 143/360 (39%), Gaps = 69/360 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL +G A+++L+ + K + ++ +Y+ ++ L K +AL +F M
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANV---VIYSTVIDSLCKYRHEDDALNLFTEM- 279
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ + P++ Y S+ L G + +L+ M + RK + P+LV
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM----------IERK-----INPNLV 324
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
++A+++A V + +++++ K + P+ TY + + + M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ +TY L+ F + ++++ + R M QRG+VG
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT---------------- 428
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
+T+T LI D+ +F+ M PNI T N
Sbjct: 429 --------------------VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+L +N +KA +FE R+ ++PD YTY+ M+E A +W+
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRST-------------MEPDIYTYNIMIEGMCKAGKWK 515
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 80/424 (18%), Positives = 152/424 (35%), Gaps = 62/424 (14%)
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
G+F V Q R PS + + + + K+DLV F KM G + TY +L+
Sbjct: 64 GLFGVMAQSRPF---PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
F +++ A+A + M + G L C+ R DA+ +V+++ + +
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY- 179
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT----VNAMLKVYSRNDMFS 506
KP +TFT LI + +++ M + C+P++ T VN + K + +
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 507 KAKELFEETTRANSSGYT------------------FLSGDGAPLKPDEYTYSSMLEASA 548
++ AN Y+ F + ++P+ TYSS++
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+W D ++ ++E D+ ++ G++
Sbjct: 300 NYGRWS----------------DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDK--LEKLLN 666
E +I+ + N +LIN DR+ K LE ++
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCML-----------------DRLGEAKQMLELMIR 386
Query: 667 ALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHEAFDVKE 726
C N + ++ +A E R++S G+ + +HG +A D
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 727 TENV 730
+ V
Sbjct: 447 AQMV 450
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 179/427 (41%), Gaps = 37/427 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + ++ L K G EA +F+ M ++ PD+ ++S+ G+ G L E+ +L+E
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRM-KEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE 247
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR+ K D+V YNA++N + + + F +++ G+ +
Sbjct: 248 EMRRSGCK---------------ADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMAN 292
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ ++ + G + F +M G A+ TY L+ + G++++A+ +
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352
Query: 409 NMEQRGVVGTASVYYELACCLCNN---GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
M ++GV Y L LC +D + ++EK +R + E+ +T LI
Sbjct: 353 EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK-AGVRAN---ELLYTTLIHGH 408
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ + + + MK+ E +I A+++ +AK L T+ + SG
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLL---TKMDESG-- 463
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
L+P+ Y++M++A + + + + + SG Q + + L+ +
Sbjct: 464 --------LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCK 515
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
AG F+ + + G P+ +T ++ +AV L N M + + +
Sbjct: 516 AGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVV 575
Query: 645 WTELFES 651
+T L +
Sbjct: 576 YTALLDG 582
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 159/393 (40%), Gaps = 43/393 (10%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+ + M + G+M + +G R+AM + ++ + + F YT L
Sbjct: 278 YGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQ---MRVRGMALNEFTYTCL 334
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ---VGLLKELVKLIER-- 289
+ KAGR +A+ + + M+ + ++ Y + L + V +++++++E+
Sbjct: 335 IDGTCKAGRLDDAIVLLDEMVRQ-GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Query: 290 ---------------MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
K S++ + + + LE D+ +Y A++ H+
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+ ++ +SGL+P+ Y M+ +SGK +K+ SG +TY L+
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGL 513
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSK 452
+ G I+EA++ M G+ Y L LC NG +A+ + ++ K + K
Sbjct: 514 CKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK 573
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 511
+ +T L+ + G++ D ++ M D + ++ + + +M +A+E+
Sbjct: 574 ---VVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREV 630
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
F E G + PD Y+ ++
Sbjct: 631 FSEMI-------------GHGIAPDRAVYNCLI 650
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 4/225 (1%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
K++ K + LEP+ ++Y +++AC S + + +++ SG +P+ TY ++
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ ++G D F KM G Y LV + G +NEAV M +G+
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLD 572
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISI 477
VY L G DA + K K + L++ +T I + + + +
Sbjct: 573 KVVYTALLDGYLKQGNLHDAFAL--KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREV 630
Query: 478 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
F M H P+ N ++ Y + +A L +E R S
Sbjct: 631 FSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPS 675
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 109/256 (42%), Gaps = 19/256 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLVD L + A+ +R+M ++G+ E L+ G + +A+ +L +
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ D+ +Y L+ L + EA + M ++ L P+ Y ++ + G
Sbjct: 428 GLELDIS---LYGALIQGLCNVHKLDEAKSLLTKM-DESGLEPNYIIYTTMMDACFKSGK 483
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ E + +++++ D +P+++ Y A+++ + F +
Sbjct: 484 VPEAIAMLQKI---------------LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+R GL P+ Y ++ + ++G + + F +M G ++ + Y L+ + ++G
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588
Query: 400 INEAVAAVRNMEQRGV 415
+++A A M G+
Sbjct: 589 LHDAFALKAKMIDSGL 604
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 186/459 (40%), Gaps = 42/459 (9%)
Query: 153 SEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSV 212
+ E + L+ + A+ ++ + ++GL KL+ G ++ V
Sbjct: 226 ANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEV 285
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
L + + + L + + Y +++ L K EA R+FN L+D PD Y ++
Sbjct: 286 L---HTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFN-DLKDRGYAPDRVMYTTMIH 341
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L ++G E KL M D ++P+ YN +L+ + S ++
Sbjct: 342 GLCEMGSFGEARKLWFEM---------------MDKGMQPNAYTYNTMLHGSLKSGDFER 386
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
++ ++ G + T + + GK D E F+KM+++G A+TY L+R
Sbjct: 387 ACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIR 446
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
F +EGK++E + + + + + S+Y L C +G ++ A ++ + S +
Sbjct: 447 GFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSS-KGLH 505
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMK----DHCEPNIGTVNAML-KVYSRNDMFSK 507
P T+ ++ S+ G F+H++ + C GT A K+ S K
Sbjct: 506 PNAYTYDTMLHGSLKSGD-------FEHVRELYNETCNKGYGTTTATCNKIISELCSRGK 558
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+ E E + + +G +K D TY+S++ + + + G
Sbjct: 559 SDEASEMFKKMSETG----------IKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQG 608
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
Q + +A L+++ + G + + ++ G PH
Sbjct: 609 LQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPH 647
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 161/404 (39%), Gaps = 57/404 (14%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV--LVRA 393
V+ QL+++G++ S + L++GK +L+ EF+++M K+G A A T V L++A
Sbjct: 178 VYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQA 237
Query: 394 FWEEGKI----------------------NEAVAA-------------VRNMEQRGVVGT 418
F + G++ N+ +A + M R + T
Sbjct: 238 FCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPT 297
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI- 477
Y E+ LC N +A V +K R P + +T +I + G + +
Sbjct: 298 IYTYQEIINGLCKNEECLEAYRVFNDLKD-RGYAPDRVMYTTMIHGLCEMGSFGEARKLW 356
Query: 478 FQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
F+ M +PN T N ML ++ F +A EL+ E + GY +
Sbjct: 357 FEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMC---NKGYGTTT---------- 403
Query: 538 YTYSSML-EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
T + ++ E + E FE V+K M+ +G Q D + L+ + GK + +
Sbjct: 404 VTCNKIISELCSRGKSDEAFE-VFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLN 462
Query: 597 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRI 656
L+ P + ++I++ ++E A L+ M+ H + + +
Sbjct: 463 ELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSG 522
Query: 657 SRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLS 700
+ + +L N CN + T + ++ + LC K + S
Sbjct: 523 DFEHVRELYNETCNKGYGT---TTATCNKIISELCSRGKSDEAS 563
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 168/431 (38%), Gaps = 37/431 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + LL +A R EAL I + PD+ +Y+ + +L G + L+
Sbjct: 149 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLR 208
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + + V PD+V YN V++ +FK++ + G+ P
Sbjct: 209 MMAEGGT-------------VCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 255
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + ++ D F R+M G TY L+ + G+ EAV +
Sbjct: 256 LVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 315
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M ++ ++ L LC G+ ++A V + + +++ P ++T ++
Sbjct: 316 EMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFSYTIMLNGYATK 374
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY--TF 525
G + D +F M D P+I T N ++K Y+ M KA +F E + T+
Sbjct: 375 GCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTY 434
Query: 526 LSGDGAPLK--------------------PDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
++ A + PD+Y Y +++ T + + +
Sbjct: 435 MTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 494
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
+G +LD ++ + G+ ++ FD + G P + + ++ + EK
Sbjct: 495 NGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEK 554
Query: 626 AVALINAMAYA 636
A+ + +AM A
Sbjct: 555 ALRVFDAMVSA 565
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 119/601 (19%), Positives = 228/601 (37%), Gaps = 70/601 (11%)
Query: 93 FRQLASESKEFAGDNLKRENLRELKEMFEKDL---NWVLDD-----DVQLGSDYFAKNVE 144
+ L ++ K D+L R + E + D+ N V+D DV D F + V+
Sbjct: 191 LKSLCNQGKSGQADDLLRM-MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249
Query: 145 WHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKG 204
+ + + L R M K F+R M G++ L+ G G
Sbjct: 250 RGIPPDLVTYSSVVHALC---KARAMD-KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPD 263
W++A+ V ++ + L L+ L K G+ EA +F+ M ++ N PD
Sbjct: 306 QWKEAVRVFKE---MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN--PD 360
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ +Y + G L ++ L + M + PD+ +N ++ A
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDG---------------IAPDIYTFNVLIKA 405
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
+F ++R G+KP TY + + + GK D E F +M G
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
Y L++ F G + +A + + G+ + + LC GR DA + +
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525
Query: 444 KIKSLRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHM-KDHCEPNI---GT-VNA 494
++ P + + L MDG G ++ + +F M EPN+ GT VN
Sbjct: 526 LTVNV-GLHPDAVVYNML----MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYT------FLSGDGAPLKP------------D 536
K+ ++ S +E+ ++ + ++ Y F +G P K +
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
+ TYS +L ++ +++K + ++D ++ + + + F
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFA 700
Query: 597 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT----ELFESN 652
S+ +G +P + ++ M+ + + E+A + ++M A R EL + N
Sbjct: 701 SISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKN 760
Query: 653 E 653
E
Sbjct: 761 E 761
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/366 (18%), Positives = 133/366 (36%), Gaps = 66/366 (18%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK---------------- 346
R VL P Y +++ C +H+ + F QL ++GL+
Sbjct: 102 RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEA 161
Query: 347 --------------------PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG--A 384
P +Y + ++ + GK + R MA+ G
Sbjct: 162 KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDV 221
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+ Y ++ F++EG +N+A + M QRG+ Y + LC A + +
Sbjct: 222 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ 281
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML------- 496
+ + + P T+ LI G + + +F+ M + P++ +N ++
Sbjct: 282 MVN-KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYG 340
Query: 497 KVYSRNDMF------SKAKELFEETTRANSSG-----------YTFLSGDGAPLKPDEYT 539
K+ D+F + ++F T N + + GDG + PD YT
Sbjct: 341 KIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG--IAPDIYT 398
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
++ +++A A + ++ M G + + ++ R GK F+ ++
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 600 EAGEIP 605
+ G +P
Sbjct: 459 DQGVVP 464
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 127/324 (39%), Gaps = 25/324 (7%)
Query: 303 RKNWDPVLEPDLVVYNAVLN------ACVPSHQWKGVFWVFKQLRKSG---LKPSAATYG 353
++ PVL+ DL + A L AC + R G L P++ TY
Sbjct: 58 QRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPRVLSPTSYTYA 117
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV-AAVRNMEQ 412
+ M+ ++ + +L FF ++ ++G + A+ L++ F E + +EA+ + +
Sbjct: 118 ILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPE 177
Query: 413 RGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
G V Y L LCN G+ Q L+ + P + + +I G +
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ +F+ M + P++ T ++++ + KA+ +
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG----------- 286
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ PD +TY++++ ++ QW+ V+K M D L+ + GK
Sbjct: 287 --VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344
Query: 591 LEHAFDSLLEAGEIPHPLFFTEML 614
FD++ G+ P +T ML
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIML 368
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 16/281 (5%)
Query: 327 SHQWKGVFWVFK-QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ QW+ + V + L +S +P Y L ++ Q + + + + ++
Sbjct: 142 NRQWEPIITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTED 201
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY +L+RA+ G+++ A + M++ G+ TA+VY L + A+ V +++
Sbjct: 202 TYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRM 261
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM 504
K R E T+T +I + +F MK C+PNI T A++ ++R +
Sbjct: 262 KKERCRTNTE-TYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGL 320
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
KA+E+FEE +A +PD Y Y++++EA + A + ++ M
Sbjct: 321 CEKAEEVFEEMQQAGH-------------EPDVYAYNALMEAYSRAGLPQGASEIFSLME 367
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
GC+ D+ + L+ RAG E AF L + G P
Sbjct: 368 HMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRP 408
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 148/385 (38%), Gaps = 49/385 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL +G+ H A + + M ++ L P Y++ L + ++ V++ +R
Sbjct: 202 TYALLLRAYCNSGQLHRAEGVISEMQKN-GLPPTATVYNAYLDGLLKARCSEKAVEVYQR 260
Query: 290 MRQKPSKR-------IKNMHRKNWDPV-------------LEPDLVVYNAVLNACVPSHQ 329
M+++ + + N++ K P+ +P++ Y A++NA
Sbjct: 261 MKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGL 320
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+ VF++++++G +P Y ME ++G E F M G +Y +
Sbjct: 321 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNI 380
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG---RWQDAMLVVEKIK 446
LV A+ G EA AA + ++Q+G+ T + L +G R ++ M + K
Sbjct: 381 LVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHK-S 439
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--------DHCEPNIGTVNAMLKV 498
LR P ++ + G +DD + M+ P+ T N ++ V
Sbjct: 440 GLR---PDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNV 496
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
Y R + + F + D T++S + A A ++
Sbjct: 497 YGRAGYLDRMEAAFRALAARGLA-------------ADVVTWTSRIGAYARKKEYGRCLE 543
Query: 559 VYKGMALSGCQLDQTKHAWLLVEAS 583
+++ M +GC D LL S
Sbjct: 544 IFEEMVDAGCYPDAGTAKVLLAACS 568
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 122/327 (37%), Gaps = 66/327 (20%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
++R R+ E ++++ + + + K M G L+ +G
Sbjct: 263 KERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCE 322
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A V + + + D+ + Y L+ +AG P A IF+LM E PD A+Y
Sbjct: 323 KAEEVFEEMQQAGHEPDV---YAYNALMEAYSRAGLPQGASEIFSLM-EHMGCEPDRASY 378
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQ---KPSKR----IKNMHRKNWDPV----------- 309
+ + G+ GL +E + ++Q +P+ + + + H K+ +
Sbjct: 379 NILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHK 438
Query: 310 --LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK-------PSAATYGLAMEVML 360
L PD NA+LNA + + + + + + G P +TY + + V
Sbjct: 439 SGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYG 498
Query: 361 QSG-----------------------------------KYDLVHEFFRKMAKSGEAIGAL 385
++G +Y E F +M +G A
Sbjct: 499 RAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAG 558
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQ 412
T KVL+ A +E ++ + A VR+M +
Sbjct: 559 TAKVLLAACSDERQVEQVTAIVRSMHK 585
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 148/338 (43%), Gaps = 27/338 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+VDRL + + + M +G++ T L+ GL + G W++A +L+ + G
Sbjct: 237 IVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
DL + ++ L+ I+ K G EA I M E + PD+A Y+++ + L
Sbjct: 297 IMPDLVA---FSVLIDIMCKEGEVSEARVILKTMTE-MGVEPDVATYNTL---MNGYCLR 349
Query: 281 KELV---KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
E+V K+ E M K PD+ ++ ++N + + +F
Sbjct: 350 MEVVEARKVFEVMISKGRM---------------PDVFSFSILVNGYCKAKRIDEAKQLF 394
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
++ GL P +Y + + Q+ + E F+ M +G +TY +L+ ++
Sbjct: 395 DEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQ 454
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
G +++A+ R ME G+ Y + +C G+++DA + ++ S++ +P
Sbjct: 455 GYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAEL-SVKGLQPNNWV 513
Query: 458 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
T I GG +D+ F+ M KD C P G +N
Sbjct: 514 CTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCING 551
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 148/354 (41%), Gaps = 34/354 (9%)
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
I GK GR A+ +F++M+ P++ +Y + L +VG E++KL+E M+
Sbjct: 171 FCIEGKIGR---AIELFDVMVAR-GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVG 226
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
EPD+V+YN +++ +F +++ +G+ P+ TY
Sbjct: 227 C---------------EPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTS 271
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + G++ +M + + VL+ +EG+++EA ++ M + G
Sbjct: 272 LIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMG 331
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
V + Y L C +A V E + S + P +F+ L+ ID+
Sbjct: 332 VEPDVATYNTLMNGYCLRMEVVEARKVFEVMIS-KGRMPDVFSFSILVNGYCKAKRIDEA 390
Query: 475 ISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+F M P+ + N ++ + +A+ELF++ +S+GY
Sbjct: 391 KQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDM---HSNGY---------- 437
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
P+ TYS +L+ + + +++ M SG + D + ++ + GK
Sbjct: 438 PPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/379 (19%), Positives = 148/379 (39%), Gaps = 34/379 (8%)
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
++AL FN M+ + N P I + EL + RM+ K + ++ ++
Sbjct: 73 NDALSAFNHMV-NTNPLPSIVKF-------------GELFSALVRMKH--YKTVVSLSKQ 116
Query: 305 NWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
+ D++ ++N C H G F V ++ K GL+P+ T+ + G
Sbjct: 117 MEMAGISHDVLSLTILINCFCRLCHVDYG-FSVLGKIIKLGLEPNVITFSTLINGFCIEG 175
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
K E F M G +Y ++++ GK E + + +M+ G +Y
Sbjct: 176 KIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYN 235
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
+ LC + +A+ + K+K P +T+T LI + G + + MK
Sbjct: 236 TIVDRLCKDRLVNEAVHIFCKMKG-TGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKG 294
Query: 484 -HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
+ P++ + ++ + + S+A+ + + T ++PD TY++
Sbjct: 295 GNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMG-------------VEPDVATYNT 341
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
++ + V++ M G D + L+ +A + + FD + G
Sbjct: 342 LMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRG 401
Query: 603 EIPHPLFFTEMLIQAIVQS 621
IP + + LI + Q+
Sbjct: 402 LIPDTVSYNT-LISGLCQA 419
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 124/331 (37%), Gaps = 33/331 (9%)
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
H N +P+ P +V + + +A V +K V + KQ+ +G+ + + + +
Sbjct: 81 HMVNTNPL--PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
D K+ K G +T+ L+ F EGKI A+ M RG
Sbjct: 139 LCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS 198
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y + LC G+ + + ++E +K + +P + + ++ +++ + IF M
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVV-GCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKM 257
Query: 482 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
K P + T +++ + +A L E G + PD +
Sbjct: 258 KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM-------------KGGNIMPDLVAF 304
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE-----HAF 595
S +++ + + K M G + D + L+ G C +E F
Sbjct: 305 SVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM-----NGYCLRMEVVEARKVF 359
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
+ ++ G +P F +I+ + Y KA
Sbjct: 360 EVMISKGRMPDVFSF------SILVNGYCKA 384
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 164/390 (42%), Gaps = 39/390 (10%)
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+F ML+ + P++ Y+ + G L ++ +RM +K
Sbjct: 192 VFKEMLQS-QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCL------------- 237
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P++V YN +++ + F + + + GL+P+ +Y + + + + G+ +
Sbjct: 238 --PNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEIS 295
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M K G ++ +TY L++ + +EG ++A+ M + G+ + Y L +
Sbjct: 296 FVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSM 355
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C G A +++++ +R P E T+T L+ G++++ + + M D+ P+
Sbjct: 356 CKAGNMNRATEFLDQMR-VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPS 414
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T NA++ + A + E+ L PD +YS++L
Sbjct: 415 VVTYNALINGHCIAGKMVDAIAVLEDMKEKG-------------LTPDVVSYSTVLSGFC 461
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL---VEASRAGK-CHLLEHAFDSLLEAGEI 604
++ + V + M G + D ++ L+ E R + C L FD +L G
Sbjct: 462 RSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDL----FDEMLRVGLP 517
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
P +T ++ ++ + +KA+ L N M
Sbjct: 518 PDEFTYTALINAYCMEGDLQKAIQLHNEMV 547
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 141/354 (39%), Gaps = 66/354 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ AG ALR F+ M E P++ Y+++ ++ + + +L+
Sbjct: 206 FTYNILIRGFCLAGNLDVALRFFDRM-EKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLR 264
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG---- 344
M K LEP+L+ YN V+N + K + +V ++ K G
Sbjct: 265 SMALKG---------------LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLD 309
Query: 345 -------------------------------LKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
L PS TY + M ++G + EF
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLD 369
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M G TY LV F ++G +NEA ++ M G + Y L C G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAG 429
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 492
+ DA+ V+E +K + P ++++ ++ +D+ + + + M +P+ T
Sbjct: 430 KMVDAIAVLEDMKE-KGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITY 488
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+++++ + +A +LF+E R G P PDE+TY++++ A
Sbjct: 489 SSLIQGFCEQRRTKEACDLFDEMLRV-----------GLP--PDEFTYTALINA 529
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 178/460 (38%), Gaps = 62/460 (13%)
Query: 168 REMTAKNWKFVRI-MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRD 224
RE K FV MN+ G E L+KG +G++ QA+ + + +GL
Sbjct: 287 REGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLS---- 342
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
S YT L+ + KAG + A + M L P+ Y ++ Q G + E
Sbjct: 343 -PSVITYTSLIHSMCKAGNMNRATEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 285 KLIERMRQK---PSKRIKN-------MHRKNWDPV----------LEPDLVVYNAVLNAC 324
++++ M PS N + K D + L PD+V Y+ VL+
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
S+ V +++ G+KP TY ++ + + + F +M + G
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
TY L+ A+ EG + +A+ M ++GV+ Y L L R ++A ++ K
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLK 580
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDM 504
+ S P ++T+ LI ++C +I +V +++K + M
Sbjct: 581 L-FYEESVPSDVTYHTLI---------ENCSNI----------EFKSVVSLIKGFCMKGM 620
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
++A ++FE N KPD Y+ M+ +YK M
Sbjct: 621 MTEADQVFESMLEKNH-------------KPDGTAYNVMIHGHCRGGDIRKAYSLYKEMV 667
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
SG L L+ + GK + L ++L + E+
Sbjct: 668 KSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCEL 707
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 108/270 (40%), Gaps = 51/270 (18%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
EA+RV +R+M AK K I S L++G ++ ++A + D
Sbjct: 468 EALRV------KRKMVAKGIKPDTITYSS-----------LIQGFCEQRRTKEACDLFDE 510
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + D F YT L+ G +A+++ N M+E + PD+ Y + L
Sbjct: 511 MLRVGLPPD---EFTYTALINAYCMEGDLQKAIQLHNEMVEK-GVLPDVVTYSVLINGLN 566
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC----------- 324
+ +E +L+ ++ + S P V Y+ ++ C
Sbjct: 567 KQARTREAKRLLLKLFYEESV---------------PSDVTYHTLIENCSNIEFKSVVSL 611
Query: 325 VPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+ KG+ VF+ + + KP Y + + + G + +++M KSG
Sbjct: 612 IKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGF 671
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ +T LV+ +EGK+NE + + N+
Sbjct: 672 LLHTVTVIALVKTLHKEGKVNELNSVIANV 701
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 18/201 (8%)
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P T+ LI G++D + F M K C PN+ T N ++ Y + EL
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
L G L+P+ +Y+ ++ + + +V M G LD
Sbjct: 263 LRSMA---------LKG----LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLD 309
Query: 572 QTKHAWLLVEASRAGKCH--LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
+ + L+ + G H L+ HA +L G P + +T ++ N +A
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHA--EMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF 367
Query: 630 INAMAYAPFHITERQWTELFE 650
++ M ER +T L +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVD 388
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 154/360 (42%), Gaps = 32/360 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT ++ +L KAGR EA +F M + ++ P AY+++ + G G ++ KL+ER+
Sbjct: 21 YTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRFEDAYKLLERL 79
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R++ P +V +N++L + +F+ ++K +P+++
Sbjct: 80 RERGCI---------------PSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSS 123
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + ++++ G+ + + +M + LT ++V + K+ EA +
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
QRG Y L L G+ +A + EK+ H+ + +T LI + G
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN-PVVYTSLIRNFFIHGR 242
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+D IF+ + + C+P++ +N + + K + +FE+ Y FL
Sbjct: 243 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI-----RSYGFL--- 294
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
PD +YS ++ A Q ++ M G LD + ++ ++GK H
Sbjct: 295 -----PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 349
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/479 (19%), Positives = 188/479 (39%), Gaps = 83/479 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + A +L+ L+++ + S + +L LGK + EAL +F +M
Sbjct: 59 MIMGYGSAGRFEDAYKLLER---LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 115
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P+ + Y+ + L G ++E ++++ M L P+L+
Sbjct: 116 KDAE--PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS---------------LFPNLL 158
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ + + + + +F+ + G P TY ++ + + G+ D + F KM
Sbjct: 159 TVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 218
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G + Y L+R F+ G+ + + + +RG ++ C+ G
Sbjct: 219 LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEV 278
Query: 436 QDAMLVVEKIKS---LRHSKPLEITFTGL-----------IISSM--------------- 466
+ ++ E I+S L + I GL I +M
Sbjct: 279 EKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAV 338
Query: 467 -DG----GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
DG G + I + MK+ C +P + T A++ ++ D +A LFEE A S
Sbjct: 339 VDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE---AKS 395
Query: 521 SGY--------TFLSGDG-----------------APLKPDEYTYSSMLEASATAHQWEY 555
G + + G G L P+ YT++S+L+A A +
Sbjct: 396 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 455
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ M C + ++ L+ R K + + + + G +P+ + +T M+
Sbjct: 456 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 514
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/431 (19%), Positives = 165/431 (38%), Gaps = 67/431 (15%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+ ++VDRL + + +K +Q G L+ GLG KG +A + +
Sbjct: 159 TVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE-- 216
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN------------------------ 252
+ D + VYT L+ GR + +IF
Sbjct: 217 -KMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKA 275
Query: 253 -------LMLEDCNLY---PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
++ ED Y PD+ +Y + L + G +E + M+Q+
Sbjct: 276 GEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG-------- 327
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
D YNAV++ S + + + +++++ ++P+ ATYG ++ + +
Sbjct: 328 -------FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI 380
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+ D + F + G + + Y L+ F + G+I+EA + M ++G+ +
Sbjct: 381 DRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 440
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 481
L L +A++ + +K ++ P T++ LI + +Q M
Sbjct: 441 NSLLDALVKAEEINEALVCFQSMKEMK-CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 499
Query: 482 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
K PN+ T M+ ++ + A LFE F + G PD +++
Sbjct: 500 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFER----------FKANGGI---PDAASFN 546
Query: 542 SMLEASATAHQ 552
+++E + A++
Sbjct: 547 ALIEGMSNANR 557
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 106/245 (43%), Gaps = 14/245 (5%)
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+FF ++ G ++Y ++ + G++ EA ME V A Y +
Sbjct: 4 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
+ GR++DA ++E+++ R P ++F ++ +D+ +S+F+ MK EPN
Sbjct: 64 GSAGRFEDAYKLLERLRE-RGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNS 122
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N ++ + +A + +E A+ L P+ T + M++
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHAS-------------LFPNLLTVNIMVDRLCK 169
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A + E +++ + GC D + L+ + G+ F+ +L+AG +P+
Sbjct: 170 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 229
Query: 610 FTEML 614
+T ++
Sbjct: 230 YTSLI 234
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 13/277 (4%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F +L+ GLKP +Y + V+ ++G+ E F +M A Y ++ +
Sbjct: 6 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 65
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G+ +A + + +RG + + + + CL + +A+ + E +K + ++P
Sbjct: 66 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK--KDAEPNSS 123
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+ +I GG +++ I M +H PN+ TVN M+ + +A ++FE
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEM-EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 182
Query: 515 TTR--ANSSGYTFLS---GDGAPLKPDEY--TYSSMLEASATAHQWEYFEYVYKGMALSG 567
++ N T+ S G G + DE + ML+A A+ Y + + + G
Sbjct: 183 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI-RNFFIHG 241
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ D K L+ LL D + +AGE+
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEV 278
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 106/263 (40%), Gaps = 24/263 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R+ ++ + +K + Y ++ K+G+ H+A I M
Sbjct: 303 LIHGLTKAGQARETSNIF---HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV------ 309
E C + P +A Y ++ L ++ L E L E + K + ++ D
Sbjct: 360 EKC-VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI 418
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
L P++ +N++L+A V + + F+ +++ P+ TY +
Sbjct: 419 DEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSIL 478
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + + KY+ F++ M K G +TY ++ + G I +A + + G
Sbjct: 479 INGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGG 538
Query: 416 VGTASVYYELACCLCNNGRWQDA 438
+ A+ + L + N R +A
Sbjct: 539 IPDAASFNALIEGMSNANRAMEA 561
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 16/177 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y+ L+ GK GR EA I M++ L P++ ++S+ L + + E + +
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKK-GLTPNVYTWNSLLDALVKAEEINEALVCFQS 462
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ P+ Y+ ++N ++ F ++ ++K GL P+
Sbjct: 463 MKEMKCP---------------PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNV 507
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
TY + + + G + F + +G A ++ L+ + EA A
Sbjct: 508 VTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQA 564
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 169/421 (40%), Gaps = 77/421 (18%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDI 264
WR + V W K + +YT+L+ LG+ GR H A +F ++LE C D
Sbjct: 26 WRCTLEVFSW--SKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQ--ADQ 81
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y ++ G+ + +E + + M++ +P +P+ V NA+++A
Sbjct: 82 YTYTALVNAYGKAKMFEEALAVFSHMKESN------------EPNCQPNTVTCNALIDAL 129
Query: 325 VPSHQWKGVFWVFKQLRKS------GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM--A 376
V + VF +R G +P+ TY + ++ + + G D+ + + M
Sbjct: 130 VKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDG 189
Query: 377 KSGEAI--GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ +++ + TY L+ A + G +A V M + GV
Sbjct: 190 NTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGV------------------- 230
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 493
+P IT+T LI + G ++ + F+ MK + ++
Sbjct: 231 -----------------QPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYT 273
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
AM+ Y R ++ KA+E+F+ + L+P++ TY S++EA A
Sbjct: 274 AMIDAYGREGLYQKAEEMFKMMQHSG-------------LRPNQVTYLSLMEAYGKAGLP 320
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
E V+ M SG + + ++ L+ +AG D + AG P+ + ++ +
Sbjct: 321 EESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQPNLITYSAI 380
Query: 614 L 614
L
Sbjct: 381 L 381
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 121/310 (39%), Gaps = 27/310 (8%)
Query: 319 AVLNACVPSHQWKGVFWVFKQLRK-SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
VL H W+ VF +K S P++ Y + + + G+ F++M
Sbjct: 15 CVLTELQRQHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLL 74
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG---VVGTASVYYELACCLCNNGR 434
TY LV A+ + EA+A +M++ L L G
Sbjct: 75 EKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGL 134
Query: 435 WQDAMLVV----EKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-----H 484
+ A+ V + L H +P IT+ LI + G +D + + Q+M+D
Sbjct: 135 YDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQS 194
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+PN T N ++ + ++ KA+EL + ++PD TY++++
Sbjct: 195 VQPNSATYNTLINACGKGGLYEKAEELVDLMVEHG-------------VQPDHITYTALI 241
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+A A WE E +KGM + +D + ++ R G E F + +G
Sbjct: 242 DAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLR 301
Query: 605 PHPLFFTEML 614
P+ + + ++
Sbjct: 302 PNQVTYLSLM 311
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY-GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ L +G M VL ++ G D+ + Y L+ GK G +A + +LM
Sbjct: 166 LIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLM 225
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E + PD Y ++ G+ GL + K M N + D+
Sbjct: 226 VEH-GVQPDHITYTALIDAYGKAGLW-----------ENAENTFKGMKGTN----VSVDV 269
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ Y A+++A ++ +FK ++ SGL+P+ TY ME ++G + F
Sbjct: 270 MAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNI 329
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M +SG L Y L+ A+ + G EA + M + G Y + C +
Sbjct: 330 MRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQPNLITYSAILSSCCKSNC 389
Query: 435 WQDAMLVVEKIK 446
W +A +++ +++
Sbjct: 390 WVEAQVLLRRLQ 401
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 24/277 (8%)
Query: 196 LLKGLGDKGSWRQAMSVL----DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
L+ L G + QA+ V D GL+ + + Y L+ L K G +++
Sbjct: 125 LIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCE-PNVITYNVLIDALCKEGLLDIGMKVL 183
Query: 252 NLMLE---DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
M + D ++ P+ A Y+++ G+ GL ++ +L++ M +
Sbjct: 184 QYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHG-------------- 229
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
++PD + Y A+++A + W+ FK ++ + + Y ++ + G Y
Sbjct: 230 -VQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKA 288
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
E F+ M SG +TY L+ A+ + G E+ M + G G +Y L
Sbjct: 289 EEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDA 348
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
G + +A +++ ++ +P IT++ ++ S
Sbjct: 349 YGKAGNYLEAARMLDMMRR-AGCQPNLITYSAILSSC 384
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
++ Y L+ GKAG P E+ +FN+M E ++ Y S+ G+ G E ++
Sbjct: 303 NQVTYLSLMEAYGKAGLPEESRNVFNIMRES-GYEGNVLIYSSLIDAYGKAGNYLEAARM 361
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
++ MR+ +P+L+ Y+A+L++C S+ W + ++L+ G
Sbjct: 362 LDMMRRAGC---------------QPNLITYSAILSSCCKSNCWVEAQVLLRRLQVFG 404
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 172/420 (40%), Gaps = 42/420 (10%)
Query: 237 ILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQV----GLLKELVKLIERMR 291
+LG RPH A + +++ L P +A SV TL + GLL + V+ + R+R
Sbjct: 101 LLGAGHRPHLAASLVDILHRAALALGPHRSALPSVFDTLLSLLADHGLLDDAVRALARVR 160
Query: 292 Q---KPSKRIKN-------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q P+ R N + R+ ++ + P++ +N V++ +
Sbjct: 161 QLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARA 220
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F +++ G P TY ++ + G+ + V +M KSG A +TY L+ F
Sbjct: 221 LFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFS 280
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G I +A + M++ GV+ C G ++AM + +++ +R P E
Sbjct: 281 KFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMR-VRGMMPNE 339
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+T L+ + G +DD I + M PN+ T M+ + + A ++
Sbjct: 340 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSL 399
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
RA +K +E Y++++ E + M G +LD +
Sbjct: 400 MERAG-------------VKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSL 446
Query: 575 HA---WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
+ W L + + + L H D + G P+ + +T ++ +AVAL++
Sbjct: 447 YGTLIWGLCKVQKLDEAKSLLHKMD---DCGLRPNTVIYTTIMDAFFKAGKESEAVALLH 503
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/407 (18%), Positives = 160/407 (39%), Gaps = 43/407 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L++ S+ K + + M + G+M + + +G R+AM + ++
Sbjct: 275 LINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQ---MR 331
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQV 277
+ + + F YT L+ KAGR +A+ + + M+ L P++ Y + L G+V
Sbjct: 332 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ-GLVPNVVTYTVMVDGLCKEGKV 390
Query: 278 GLLKELVKLIER-----------------MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
+ +++ L+ER K S+R ++ + + +E D+ +Y +
Sbjct: 391 AVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTL 450
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+ + + ++ GL+P+ Y M+ ++GK K+ SG
Sbjct: 451 IWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGL 510
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+TY L+ + G I EA++ M + G+ VY L C G A+
Sbjct: 511 QPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVH 570
Query: 441 VVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
++ ++ K + K + +T LI M G + ++ M + + ++ +
Sbjct: 571 LMNEMVDKGMSLDK---VVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFIS 627
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+ +M +A+ + E G + PD+ Y+ ++
Sbjct: 628 GFCNMNMMQEARGVLSEMI-------------GTGITPDKTAYNCLI 661
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 144/356 (40%), Gaps = 62/356 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y +++ I GKAG P +A ++ M P+I + ++ + GL +E + ++
Sbjct: 211 TYNRMIVIYGKAGEPSKAEMLYRSM-RRAMCPPNICTFTALMNAFARQGLYREAERYFDK 269
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+++ K PD YNA++ A G +F+ ++++G P
Sbjct: 270 LQEFDYK---------------PDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDT 314
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
++ + + ++G Y+ + F+ M +G + + +L+ A+ G++ EA V
Sbjct: 315 VSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSA 374
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME+ G +Y L +GR +D +E ++ SS
Sbjct: 375 MERDGTKPDTLIYNSLINAYGVSGRHED----------------MEALLAKMVKSS---- 414
Query: 470 HIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+P+IGT N +++VY++ +A+ELF+ R
Sbjct: 415 ------------SKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLK---------- 452
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
L PD T+++++ A + + K M SGC+ D A +L A R+
Sbjct: 453 ---LVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVT-ARVLFSACRS 504
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 131/327 (40%), Gaps = 52/327 (15%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
PDL YN +++A S + F +++++ P+ T+G+ + +G ++
Sbjct: 99 TFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKA 158
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
E F +M K G + G L + + + A A R++E+ YE
Sbjct: 159 EELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEK----------YE---- 204
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
+P T+ +I+ G +++ M + C P
Sbjct: 205 ----------------------CEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPP 242
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
NI T A++ ++R ++ +A+ F++ + KPD Y Y++++EA
Sbjct: 243 NICTFTALMNAFARQGLYREAERYFDKLQEFD-------------YKPDHYAYNALMEAY 289
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ +++ M +GC D H L+ RAG E F S+ AG P+
Sbjct: 290 SQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPN- 348
Query: 608 LFFTEMLIQAIVQSN-YEKAVALINAM 633
L +L+ A ++ E+A L++AM
Sbjct: 349 LKSNMLLLSAYARAGRVEEAEELVSAM 375
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 109/276 (39%), Gaps = 20/276 (7%)
Query: 138 YFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLL 197
YF K E+ ++ + A L++ S+ A + + M ++G L+
Sbjct: 266 YFDKLQEFD----YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILI 321
Query: 198 KGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED 257
G G + A + + +LKS + LL+ +AGR EA + + M D
Sbjct: 322 NAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNML---LLSAYARAGRVEEAEELVSAMERD 378
Query: 258 CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVY 317
PD Y+S+ G G +++ L+ +M + SK+ K PD+ Y
Sbjct: 379 -GTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTK------------PDIGTY 425
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N ++ + +F+ L + L P A T+ M + Y +KM +
Sbjct: 426 NTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLE 485
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
SG A+T +VL A ++ + + +++ R
Sbjct: 486 SGCRADAVTARVLFSACRSPEQVEQVTQLMESLQGR 521
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 7/220 (3%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
R N+ P +P + +YN +L +C+ ++ + V W++K + + + P A T+ L + ++ S
Sbjct: 102 RSNF-PEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDS 160
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G + E F KM G T+ +LVR + G ++ + + M G++ +Y
Sbjct: 161 GHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLY 220
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
L C G+ DA +V+K++ +E TF I + G I + IF+ M+
Sbjct: 221 NTLISSFCKEGKTHDAEKLVDKMREDGLVPHVE-TFNSRISALCGSGKILEASRIFRDMQ 279
Query: 483 DHCE-----PNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
E PN+ T ML + + M +AK L + R
Sbjct: 280 IDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKR 319
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 160/411 (38%), Gaps = 54/411 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNL---YPDIAAYHSVAVTLGQVGLLKELVKL 286
+ ++ L +G+ EA RIF M D L +P++ Y + + + G+L+E L
Sbjct: 254 TFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTL 313
Query: 287 IERMRQKPS------------KRIKN--------MHRKNWDPVLEPDLVVYNAVLNACVP 326
++ M++ + I+N + ++ +EPD+ YN V++
Sbjct: 314 VDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCK 373
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ + + ++G+ P TY + GK + +M + + T
Sbjct: 374 NGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYT 433
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKI 445
VL+ + W+EG+I+EA ++ M ++G G +V + LCNNG+ A+ +V +
Sbjct: 434 CNVLLHSLWKEGRISEAENLLQKMNEKG-YGVDTVTCNIIINALCNNGQLDKAIEIVNGM 492
Query: 446 KSLRHSK--PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRND 503
+ + L +F GL +DD IS C P++ T + ++ +
Sbjct: 493 WTHGSAALGNLGNSFIGL---------VDDTIS-----GKKCTPDLVTYSTIISGLCKAG 538
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
AK+ F E S G L+PD Y + + + + V K M
Sbjct: 539 RLDDAKKKFIEMM---SKG----------LQPDSAIYDTFIHSFCREGKISSAFQVLKDM 585
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
GC + L++ + L D + E G P + ML
Sbjct: 586 EKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHML 636
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 116/294 (39%), Gaps = 12/294 (4%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D L + M + + +M ++G++ LL G KG +A ++L + +
Sbjct: 366 IVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLL---HEM 422
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + LL L K GR EA + M E D + + L G
Sbjct: 423 ISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEK-GYGVDTVTCNIIINALCNNGQ 481
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPV--------LEPDLVVYNAVLNACVPSHQWK 331
L + ++++ M S + N+ V PDLV Y+ +++ + +
Sbjct: 482 LDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLD 541
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
F ++ GL+P +A Y + + GK + + M K G TY L+
Sbjct: 542 DAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLI 601
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+ +I E + M ++GV Y + CLC GR DA V++++
Sbjct: 602 LGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEM 655
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
+G + L+ GL G +A+ + W Y L +K + L+ L +AG EA +
Sbjct: 407 DGLLTLLVSGLCQNGKQSEAIEL--W-YRLLEKGFAANTVTSNALIHGLCEAGSKEEAAK 463
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+ MLE L D +Y+++ + + G ++E KL E M ++
Sbjct: 464 LLKEMLER-GLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG--------------- 507
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++PD+ YN +L+ + + ++ + +K+G P A TYG+ ++ ++ + +
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGE 567
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ F++M A+ Y L+RA+ E G + EA +M RG+ T++ Y L L
Sbjct: 568 KLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGL 627
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
N G A ++++++ S P + +T LI G + SI Q M ++ PN
Sbjct: 628 SNIGLVDSANQLLDEMRKEGLS-PNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPN 686
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T M+ + + A +L E + + PD TY+++
Sbjct: 687 KITYTIMINGHCKLGNMKAAAKLLNEMAQKG-------------IVPDAVTYNALTNGFC 733
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ E V M+ G LD + L+
Sbjct: 734 KEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 134/316 (42%), Gaps = 35/316 (11%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKG-----VFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
+ + EP + V L V S Q+K VF +F L GL PS T + +++
Sbjct: 115 ETLFEPAVAVTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVK 174
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+ + + ++ F M G + +V AF G++++A+ R ME+ GV
Sbjct: 175 ANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVT 234
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y + LC NGR +A EK++ R KP +T+ LI + D+ I + M
Sbjct: 235 YNNIIHGLCKNGRLDEAFQFKEKMEKER-VKPSLVTYGVLINGLVKLERFDEANCILKEM 293
Query: 482 KDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
D PN N ++ Y R S A ++ ++ S+G + P+ T
Sbjct: 294 SDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMI---SNG----------ISPNSVTC 340
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+S+++ ++Q E+ E++ + M G ++Q ++ L+ FDS L
Sbjct: 341 NSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLC-------LKCRFDSAL- 392
Query: 601 AGEIPHPLFFTEMLIQ 616
LF EML++
Sbjct: 393 -------LFIMEMLLR 401
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 140/349 (40%), Gaps = 40/349 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++++ ++ GR +A+ +F M E + P++ Y+++ L + G L E + E
Sbjct: 198 YLFSTMVNAFCTGGRVDDAIELFRKM-EKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKE 256
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M ++ R+K P LV Y ++N V ++ + K++ G P+
Sbjct: 257 KMEKE---RVK------------PSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPN 301
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
Y ++ + G + M +G + ++T L++ + + ++ A +
Sbjct: 302 NVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLE 361
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M G V + + LC R+ A+L + ++ LR+ KP + T L+
Sbjct: 362 EMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEML-LRNFKPNDGLLTLLVSGLCQN 420
Query: 469 GHIDDCISI-FQHMKDHCEPNIGTVNAML----KVYSRNDMFSKAKELFEETTRANSSGY 523
G + I + ++ ++ N T NA++ + S+ + KE+ E +S Y
Sbjct: 421 GKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISY 480
Query: 524 TFL---------SGDGAPLK---------PDEYTYSSMLEASATAHQWE 554
L +G LK PD YTY+ +L + E
Sbjct: 481 NTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIE 529
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 3/192 (1%)
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
C+ + ++ + L ++ KP+ L + + Q+GK E + ++ + G A
Sbjct: 383 CLKCRFDSALLFIMEMLLRN-FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAAN 441
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+T L+ E G EA ++ M +RG+V + Y L C G+ ++ + E
Sbjct: 442 TVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKE 501
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRN 502
++ R +P T+ L+ + G I++ ++ K + P+ T M+ Y +
Sbjct: 502 EMVR-RGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKA 560
Query: 503 DMFSKAKELFEE 514
+ + ++LF+E
Sbjct: 561 NRVEEGEKLFQE 572
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/484 (18%), Positives = 184/484 (38%), Gaps = 55/484 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN--- 252
LL+G +G +A +L + D+ Y +L L KAGR EA+R+F
Sbjct: 218 LLEGFCSRGQVDKARELL---RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRE 274
Query: 253 --LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS------------ 295
+ P + Y+ V + L Q + E V++ E+M ++ P
Sbjct: 275 LPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLA 334
Query: 296 -----KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+N+ +K + P V Y ++++ ++ + +F + + G PS
Sbjct: 335 KAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPV 394
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + ++ + G + + +KM + G +TY ++ + ++ EA+ M
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454
Query: 411 EQRGVVGTASVYYELACCLCNN---------GRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
E+ G + + LC G+ +A +++++ H P +T++ L
Sbjct: 455 ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHV-PDVVTYSTL 513
Query: 462 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
I +DD + + M K C+P + T N ++ + +A+E+ + +
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
S PD TY++++ A Q E + M G + + L+
Sbjct: 574 S-------------PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 620
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---P 637
+A + F + +G P+ +T +++ + + L M A P
Sbjct: 621 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 680
Query: 638 FHIT 641
H+
Sbjct: 681 DHVV 684
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 21/258 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G ++A VLD + D+ + Y L+ +AG+ A + + M+
Sbjct: 548 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT---YNTLVHGHCRAGQTERARELLSDMV 604
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L P++ Y ++ L + L E + +M+ P+L
Sbjct: 605 AR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA---------------PNLF 648
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y A++ + Q G +F ++ +G+ P YG + +SG+ E R+
Sbjct: 649 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREG 708
Query: 376 AKS--GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+S EA G Y+ V E GK+ A+ VR+M + G + L LC +G
Sbjct: 709 RESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 768
Query: 434 RWQDAMLVVEKIKSLRHS 451
+ +A V+E+I L +
Sbjct: 769 QGGEARAVLEEIMDLAYG 786
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 124/592 (20%), Positives = 221/592 (37%), Gaps = 97/592 (16%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D LS+R+ T K V++M G +L GL G +A V+D +
Sbjct: 49 VLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMR-- 106
Query: 220 KDKRDLKSRFVYTKLLA-ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
R + F + LA L G A ++ +M + +AY+ V V L +
Sbjct: 107 --SRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP-----VANSSAYNIVVVALCKAA 159
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ + ++L M +K RI P+ L ++VL + S + V++
Sbjct: 160 RVDDALELARTMSEK---RI---------PLAAGSL---DSVLVGLMDSGRIDEALQVYR 204
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+ R+ +P T + +E G+ D E R M A ++Y ++ + G
Sbjct: 205 ENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAG 261
Query: 399 KINEAVAAVRNMEQRGVVGTASV------YYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
++ EAV + E ++S Y + LC N R +A+ + EK+ R+
Sbjct: 262 RVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNE-RNVS 320
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P ++ LI G ++D ++FQ + P+ +++ + F A+EL
Sbjct: 321 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 380
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F + R G P P TY+ M++AS +GM C L
Sbjct: 381 FADMNR-----------RGCP--PSPVTYNVMIDASCK-----------RGMLEEACDL- 415
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
++E G +P + + ++ S E+A+ L N
Sbjct: 416 -----------------------IKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFN 452
Query: 632 AMAYAPFHITERQWTELF-----ESNEDR-ISRDKLE---KLLNALCNCNAASSEITVSN 682
M R + +S D+ R KL+ +LL + + +T S
Sbjct: 453 EMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYST 512
Query: 683 LSRALHALCRSEKER----DLSSSAHFGSQAIDISPLHGIHEAFDVKETENV 730
L L ++ R + R D+ + + +HG+ +A +KE V
Sbjct: 513 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 564
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 22/229 (9%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--RQ-KPSKRI 298
G+ EA R+ M +D ++ PD+ Y ++ L + + + L+E M RQ KP+
Sbjct: 486 GKLDEAFRLLKRMTDDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVT 544
Query: 299 KN--MH-----------RKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+N +H R+ D ++ PD+V YN +++ + Q + + +
Sbjct: 545 QNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMV 604
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
GL P+ TY + + ++ + F +M SG A TY L+ F G+++
Sbjct: 605 ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 664
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV-EKIKSLR 449
+ M G+ VY LA LC +GR A+ ++ E +SLR
Sbjct: 665 GGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 713
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/467 (19%), Positives = 174/467 (37%), Gaps = 30/467 (6%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+LL L R EA+ + + + PD +Y + L +E ++L+ M
Sbjct: 130 QLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMAD 189
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+R P++V Y+ V+N Q + +F ++ G+ P TY
Sbjct: 190 DHGRRCP------------PNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTY 237
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++ + ++ +D F++M +G TY L+ + GK E V + M
Sbjct: 238 TTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSA 297
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
RG+ Y L LC NGR ++A + + + KP T+ LI G +
Sbjct: 298 RGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR-KGIKPKVSTYGILIHGYATKGALS 356
Query: 473 DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ S M ++ P+ N Y++ M KA ++F + +
Sbjct: 357 EMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG------------ 404
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
L P+ Y ++++A + + E + M G + L+ K
Sbjct: 405 -LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERA 463
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
E +L+ G P+ +FF ++ + LI+ M + +T L
Sbjct: 464 EELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISG 523
Query: 652 NEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
D+ EK+ + + + + +E+T + L LH C + + D
Sbjct: 524 YCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL---LHGYCSASRIDD 567
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 126/303 (41%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL W +A + VY + D+ + + L+ L GR E R+ +LM
Sbjct: 450 LVYGLCTVDKWERAE---ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM- 505
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + PD +Y + G E K+ + M L P V
Sbjct: 506 EHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIG---------------LSPTEV 550
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+ + + + +F+++ + G+ P TY + + Q+ ++ E + M
Sbjct: 551 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 610
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
SG TY +++ + ++EA +++ +G+ + + L GR
Sbjct: 611 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 670
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
+DAM + I + P +T+ + + ++ G +++ S+F M K+ PN +NA
Sbjct: 671 EDAMDLFAAIPA-NGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 729
Query: 495 MLK 497
+++
Sbjct: 730 LVR 732
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/442 (20%), Positives = 169/442 (38%), Gaps = 75/442 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ G KG+ + S LD + GL ++ + K G +A+ IFN
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLS-----PDHHIFNIFFSAYAKCGMIDKAMDIFNK 399
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKEL-VKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + L P++ Y ++ L ++G + + VK + + + + P
Sbjct: 400 MRQH-GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG----------------VTP 442
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
++VV+N+++ YGL K++ E
Sbjct: 443 NIVVFNSLV------------------------------YGLC-----TVDKWERAEELV 467
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M G A+ + L+ G++ E + ME GV A Y L C
Sbjct: 468 YEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLT 527
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
GR +A V + + S+ S P E+T+ L+ IDD +F+ M + P + T
Sbjct: 528 GRTDEAEKVFDGMVSIGLS-PTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVT 586
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N +L + FS+AKEL+ + + K D YTY+ +L ++
Sbjct: 587 YNTILHGLFQTKRFSEAKELYLNMINSGT-------------KCDIYTYNIILNGLCKSN 633
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ +++ + G QL+ ++ + G+ F ++ G +P+ + +
Sbjct: 634 CVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYR 693
Query: 612 EMLIQAIVQSNYEKAVALINAM 633
+ I + + E+ +L +AM
Sbjct: 694 LVAENLIEEGSLEEFDSLFSAM 715
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 96/256 (37%), Gaps = 19/256 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
L+ L + + + +M G+ L+ G G +A V D G+
Sbjct: 484 TLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFD---GM 540
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ Y LL A R +A +F ML + P + Y+++ L Q
Sbjct: 541 VSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK-GVTPGVVTYNTILHGLFQTKR 599
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E +L M +K D+ YN +LN S+ F +F+
Sbjct: 600 FSEAKELYLNMINSGTK---------------CDIYTYNIILNGLCKSNCVDEAFKMFQS 644
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
L GL+ + T+ + + +L+ G+ + + F + +G +TY+++ EEG
Sbjct: 645 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 704
Query: 400 INEAVAAVRNMEQRGV 415
+ E + ME+ G
Sbjct: 705 LEEFDSLFSAMEKNGT 720
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 144/360 (40%), Gaps = 30/360 (8%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD+V YN +++ + + +Q GL P+ +Y + + G YD
Sbjct: 341 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+ +M + G +TY LV G+++ A+ M +RGV A +Y L LC
Sbjct: 401 WLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLC 460
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNI 489
+ A L++ ++ + P + L+ + G++D+ +F+ ++ P I
Sbjct: 461 KKFKLPAAKLLLAEMLD-QSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGI 519
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
NAM+K Y + M A + + L PDE+TYS++++
Sbjct: 520 VGYNAMIKGYCKFGMMKDAMACINRMKKRH-------------LAPDEFTYSTVIDGYVK 566
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
H + + +++ M C+ + + L+ R G H F + G +P+ +
Sbjct: 567 QHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVT 626
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAY---------APFHITERQWTELFESNEDRISRDK 660
++ I+ ++ K LI+A ++ P +T F N R +K
Sbjct: 627 YS------ILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEK 680
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 112/276 (40%), Gaps = 36/276 (13%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ L FVY L+ + G EA ++F L +E + P I Y+++ + G++
Sbjct: 477 DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK-GMNPGIVGYNAMIKGYCKFGMM 535
Query: 281 KELVKLIERMRQK---PSKRI-----------------KNMHRKNWDPVLEPDLVVYNAV 320
K+ + I RM+++ P + + M R+ +P++V Y ++
Sbjct: 536 KDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSL 595
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+N +F++++ GL P+ TY + + + K FF +M +
Sbjct: 596 INGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKC 655
Query: 381 AIGALTYKVLVRAF--------------WEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+T+ LV F ++E K + + M G ++ Y +
Sbjct: 656 VPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSIL 715
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
CLC G ++ A+ + K+ S + P ++F L+
Sbjct: 716 ICLCQYGMFRTALQLSNKMTS-KGCIPDSVSFVALL 750
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 17/233 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y L++ L K + A + ML D ++ PD Y ++ + G L E KL E
Sbjct: 451 IYNILMSGLCKKFKLPAAKLLLAEML-DQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 509
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+K + P +V YNA++ K +++K L P
Sbjct: 510 TIEKG---------------MNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDE 554
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY ++ ++ D + FR+M K +TY L+ F +G ++ ++ R
Sbjct: 555 FTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFRE 614
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
M+ G+V Y L C + DA E++ + P ++TF L+
Sbjct: 615 MQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEML-MNKCVPNDVTFNYLV 666
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 139/326 (42%), Gaps = 17/326 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L+P ++ + ++N + ++ +F + G +P TY + + + G+
Sbjct: 157 LQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAA 216
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+KM + G +TY L+ + ++ +NEA+ M+ +G+ T Y L L
Sbjct: 217 GLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGL 276
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C+ RW++A ++ ++ SL + P +TF+ LI G++ + + + M + EPN
Sbjct: 277 CSFSRWKEASAMLNEMTSL-NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFE-ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
+ T N+++ YS +A++LF+ TR KPD ++YS ++
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRG--------------CKPDVFSYSILINGY 381
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ + + ++ M G + + L+ + GK F + G +P
Sbjct: 382 CMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDL 441
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAM 633
++ +L Q KA L AM
Sbjct: 442 CTYSVLLEGFCKQGYLGKAFRLFRAM 467
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 147/355 (41%), Gaps = 21/355 (5%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + M G+ T L++GL W++A ++L+ + L
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + ++ L+ I K G EA + M E + P++ Y+S+ +
Sbjct: 297 IMPDIVT---FSLLIDIFCKEGNVLEAQGVLKTMTE-MGVEPNVITYNSLMHGYSLQMEV 352
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E KL + M + K PD+ Y+ ++N + +F ++
Sbjct: 353 VEARKLFDVMITRGCK---------------PDVFSYSILINGYCMVKRIDEAKQLFNEM 397
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
GL P+ +Y + Q GK E F+ M +G TY VL+ F ++G +
Sbjct: 398 IHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYL 457
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+A R M+ + +Y L +C +G A + ++ + +P +T
Sbjct: 458 GKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSEL-FVHGLQPDVQIYTT 516
Query: 461 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+I G +D+ + F+ M+ D C PN + N +++ + ++ S+A +L E
Sbjct: 517 IINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGE 571
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 21/209 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ L+ R EA ++FN M+ L P+ +Y ++ Q+G L+E +L +
Sbjct: 372 FSYSILINGYCMVKRIDEAKQLFNEMIHQ-GLTPNTVSYTTLIHAFCQLGKLREARELFK 430
Query: 289 RM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M +Q + + R L+P+LV+Y ++++ S
Sbjct: 431 DMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSG 490
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+F +L GL+P Y + + + G D E FRKM + G +Y
Sbjct: 491 NLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYN 550
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
V++R F + + AV + M +G V
Sbjct: 551 VIIRGFLQHKDESRAVQLIGEMRDKGFVA 579
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/423 (16%), Positives = 154/423 (36%), Gaps = 54/423 (12%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQW-KGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+HRK P+ P ++ +N +L+A V Q+ V + KQ+ +GL P+ T + +
Sbjct: 82 LHRK---PL--PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCF 136
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
DL K+ K G +T+ L+ + G+ +A+ +M RG
Sbjct: 137 CLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDV 196
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y + LC G A +++K+ +
Sbjct: 197 YTYTTIINGLCKMGETAAAAGLIKKMGEV------------------------------- 225
Query: 480 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
C+P++ T + ++ ++ + ++A ++F +++ G + P +
Sbjct: 226 ----GCQPDVVTYSTLIDSLCKDRLVNEALDIF-----------SYMKAKG--ISPTVVS 268
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
Y+S+++ + +W+ + M D + L+ + G + ++
Sbjct: 269 YTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMT 328
Query: 600 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRD 659
E G P+ + + ++ +Q +A L + M ++ L D
Sbjct: 329 EMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRID 388
Query: 660 KLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIH 719
+ ++L N + + + ++ + L A L + + R+L H D+ +
Sbjct: 389 EAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLL 448
Query: 720 EAF 722
E F
Sbjct: 449 EGF 451
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 182/467 (38%), Gaps = 62/467 (13%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
FT G + L LG +A L + G+ + +Y ++ L G EA
Sbjct: 176 FTFGVAARALCRLG------RANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA 229
Query: 248 LRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
+ N ++L C D+ + V + +G ++E +L++RM K
Sbjct: 230 ATLLNEMLLMGC--AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCM---------- 277
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
P ++ Y +L Q + ++ + + + + L GK
Sbjct: 278 -----PGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLA 328
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
E + M G A TY +L+ + G+I+ AV +R ME++G Y +
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVL 388
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT---FTGLIISSMDGGHIDDCISIFQHMKD 483
C NG W D ++E++ + K L + + G+I + G +D+ + + Q M+
Sbjct: 389 HSFCKNGMWDDTRALLEEMSA----KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444
Query: 484 H-CEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYTFLSGDGAPLKPDEY 538
C P+I + N ++ N+ +A+ +FE E AN
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG-----------------I 487
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH----LLEHA 594
TY++++ A +W+ + K M L GC LD + L+ + G LLE
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
+ ++ + + + +E+ + V+ E + ++N AP +T
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLN-QGLAPDIVT 593
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 127/308 (41%), Gaps = 35/308 (11%)
Query: 242 GRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G+ EA ++ M L+ C PD Y + L ++G + V+L+ M +K
Sbjct: 325 GKLAEATELYETMGLKGCQ--PDAHTYSILMHGLCKLGRISSAVRLLREMEKKG------ 376
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
P++V Y VL++ + W + +++ GL ++ Y + +
Sbjct: 377 ---------FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ G+ D ++M G +Y ++ ++ EA N+ + GVV
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQ 479
Y + L +GRWQDA+ + +++ + H L+ +++ GLI + G++D + + +
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEM--ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M + +PN + N ++ + A EL ++ L PD
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG-------------LAPDIV 592
Query: 539 TYSSMLEA 546
TY++++
Sbjct: 593 TYNTLING 600
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/474 (19%), Positives = 178/474 (37%), Gaps = 47/474 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +L++L +A +AL ++ M+ + P + A L ++G E + L+ M
Sbjct: 142 YNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGM 201
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ PD V+Y V++A + ++ G
Sbjct: 202 ARHGCV---------------PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVN 246
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + M G+ +M G G +TY L++ + +EA A + +
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ VV +V + CL G+ +A + E + L+ +P T++ L+ G
Sbjct: 307 PELNVVLFNTV---IGGCL-AEGKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGR 361
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
I + + + M K PN+ T +L + +N M+ + L EE + + G T
Sbjct: 362 ISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS---AKGLTL---- 414
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+ Y+ M+ A + + + + M GC D + ++ +
Sbjct: 415 ------NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 468
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
EH F++LLE G + + + + ++ + ++ AV L M + + L
Sbjct: 469 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 528
Query: 650 -----ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
+ N DR S LE++ N S I +S LC+ + RD
Sbjct: 529 KAMCKDGNVDR-SLVLLEEMAEKGIKPNNVSYNILISE-------LCKERRVRD 574
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/254 (18%), Positives = 111/254 (43%), Gaps = 17/254 (6%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+ + L + G + E + LI+ MR + PD+ YN ++
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCN---------------PDICSYNTIIYHLC 462
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ Q + +F+ L + G+ + TY + +L+ G++ ++M G ++ +
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+Y L++A ++G ++ ++ + M ++G+ Y L LC R +DA+ + +++
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
+ + P +T+ LI G + +++ + + ++ P+I T N ++ + + +
Sbjct: 583 LN-QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRL 641
Query: 505 FSKAKELFEETTRA 518
A L A
Sbjct: 642 LDDAAMLLNRAMAA 655
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 120/297 (40%), Gaps = 22/297 (7%)
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA-KSGEAIGALTYKVLVRAFWEEGK 399
R+ G++PS +Y + + V+ ++ + +R+M + T+ V RA G+
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
NEA+A +R M + G V A +Y + LC+ G +A ++ ++ + + + TF
Sbjct: 191 ANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVN-TFD 249
Query: 460 GLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
++ G + + + + M C P + T +L+ R +A+ +
Sbjct: 250 DVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL 309
Query: 519 NSSGY-TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
N + T + G A K E T +Y+ M L GCQ D ++
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEAT------------------ELYETMGLKGCQPDAHTYSI 351
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L+ + G+ + + G P+ + +T +L ++ AL+ M+
Sbjct: 352 LMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 408
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/404 (19%), Positives = 165/404 (40%), Gaps = 48/404 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE-------- 282
Y ++A L ++GR +AL++F+ M++ P+ + VA + GLL
Sbjct: 111 YIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLTKG 170
Query: 283 ---------------LVKLIERMRQKPSKRIKNMHRKNW--DPVLEPDLVVYNAVLNACV 325
L LI R + + + ++W D + PD+ +N V+
Sbjct: 171 SRLGCCIEPYAYNYLLNSLIAHGRAQDAVAL----FESWIQDGLYSPDVWSFNVVIKGVC 226
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-GA 384
++ + +++ + G P T+ + ++ + ++ + + HE R++ + G + A
Sbjct: 227 RMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNA 286
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+TY ++ + + GK+ +A++ +M + G Y L + G+ D V
Sbjct: 287 VTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVL---INGYGKALDMESAVRM 343
Query: 445 IKS--LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSR 501
+ LRH P +TF+ LI G +DD I++ M H +PN+ T + ++ +
Sbjct: 344 YRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCK 403
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+ ++A ++ E + P + Y+ +++ + + +
Sbjct: 404 QNRSAEALDILRELNMRTD------------IAPQTFIYNPVIDILCKGGKVDEANLIVT 451
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
M GC D+ + L++ G+ F ++EAG P
Sbjct: 452 DMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRP 495
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/319 (18%), Positives = 135/319 (42%), Gaps = 21/319 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KG+ G++++A+ +++ + D + + L + + HE LR
Sbjct: 221 VIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQ--- 277
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P+ Y SV + G +++ + + M + ++ P+ V
Sbjct: 278 RDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTR---------------PNTV 322
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++N + + +++QL P T+ ++ + G+ D +++M
Sbjct: 323 TYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEM 382
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS-VYYELACCLCNNGR 434
T+ +++ + ++ + EA+ +R + R + + +Y + LC G+
Sbjct: 383 GLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGK 442
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 493
+A L+V +K + P + T+T LII G I + I++F M + C P+ TVN
Sbjct: 443 VDEANLIVTDMKE-KGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVN 501
Query: 494 AMLKVYSRNDMFSKAKELF 512
+ + + M ++ ++
Sbjct: 502 SFVSCVLKAGMPNEVDQIM 520
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 185/473 (39%), Gaps = 70/473 (14%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+ +++DRL + + + ++ L+ GLG G A + +
Sbjct: 448 TVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYE-- 505
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE--------------DC---- 258
+ D + VYT L+ K GR + +I+ M+ DC
Sbjct: 506 -KMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKA 564
Query: 259 ----------------NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
L PD+ +Y + L + G K+ KL M+++
Sbjct: 565 GEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG-------- 616
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
L D YN V++ S + + + ++++ GL+P+ TYG ++ + +
Sbjct: 617 -------LHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKI 669
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+ D + F + + + Y L+ F + G+I+EA + + Q+G+ +
Sbjct: 670 DRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTW 729
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 481
L L +A++ + +K+L+ P E+T++ ++ + +Q M
Sbjct: 730 NCLLDALVKAEEIDEALVCFQNMKNLK-CPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQ 788
Query: 482 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
K +PN T M+ +R +AK+LFE R SSG PD Y+
Sbjct: 789 KQGLKPNTITYTTMISGLARVGNVLEAKDLFE---RFKSSGGI----------PDSACYN 835
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
+M+E + A++ +++ L GC++ +K +L++A C LE A
Sbjct: 836 AMIEGLSNANKAMDAYILFEETRLKGCRI-YSKTCVVLLDALHKADC--LEQA 885
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 181/446 (40%), Gaps = 59/446 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A S+L+ K K + S Y +L LG+ G+ EALRI M
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQ---KRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK 404
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P++ +Y+ + L + G L+ +K+ + M++ L P+++
Sbjct: 405 MDAA--PNLTSYNILIDMLCKAGELEAALKVQDSMKEAG---------------LFPNII 447
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ + + +F L P + T+ ++ + + GK + + + KM
Sbjct: 448 TVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKM 507
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
SG+ A+ Y L+R F++ G+ + + M RG + C+ G
Sbjct: 508 LDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEI 567
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+ + E+IK+ + P +++ LI + GG D +F MK+ + N
Sbjct: 568 EKGRALFEEIKA-QGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNI 626
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + ++ +KA +L EE L+P TY S+++ A
Sbjct: 627 VIDGFCKSGKVNKAYQLLEEMKTKG-------------LQPTVVTYGSVIDGLA------ 667
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEIPHPLFF 610
++D+ A++L E +++ L + SL++ G I
Sbjct: 668 --------------KIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLI 713
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYA 636
E L+Q + N L++A+ A
Sbjct: 714 LEELMQKGLTPNTYTWNCLLDALVKA 739
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 163/398 (40%), Gaps = 31/398 (7%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
GL K + L+ LG+ G+ ++A ++ ML D P+ Y S+ +
Sbjct: 471 GLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKML-DSGQTPNAVVYTSLIRNFFKC 529
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G ++ K+ + M MHR PDL++ N ++ + + + +F
Sbjct: 530 GRKEDGHKIYKEM----------MHRG-----CSPDLMLLNNYMDCVFKAGEIEKGRALF 574
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
++++ GL P +Y + + +++ G ++ F +M + G + Y +++ F +
Sbjct: 575 EEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKS 634
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
GK+N+A + M+ +G+ T Y + L R +A ++ E+ KS + +
Sbjct: 635 GKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS-KAVDLNVVV 693
Query: 458 FTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
++ LI G ID+ I + M+ PN T N +L D KA+E+ E
Sbjct: 694 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLL------DALVKAEEIDEALV 747
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
F + P+E TYS M+ ++ ++ M G + + +
Sbjct: 748 -------CFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYT 800
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ +R G + F+ +G IP + M+
Sbjct: 801 TMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMI 838
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/446 (19%), Positives = 174/446 (39%), Gaps = 58/446 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M+ +G + ++++ R+A V++ + R K R Y+ ++G
Sbjct: 158 MSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM------RKFKFRPAYSAYTTLIGA 211
Query: 241 AGRPHEALRIFNLM--LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
HEA + L+ +++ + + ++ + G + + L++ M+
Sbjct: 212 LSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNS---- 267
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
DLV+YN ++ + + F +L+ GL P T+ + V
Sbjct: 268 -----------FNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGV 316
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ ++ + D E F ++ + Y ++ + GK NEA + + +++G + +
Sbjct: 317 LCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPS 376
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y + CL G+ ++A+ ++E +K + P ++ LI G ++ + +
Sbjct: 377 VIAYNCILTCLGRKGKVEEALRILEAMK--MDAAPNLTSYNILIDMLCKAGELEAALKVQ 434
Query: 479 QHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
MK+ PNI TVN M+ D KA+ L E + FL D PD
Sbjct: 435 DSMKEAGLFPNIITVNIMI------DRLCKAQRLDEACS-------IFLGLDHKVCTPDS 481
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK---------- 587
T+ S+++ + +Y+ M SG + + L+ + G+
Sbjct: 482 VTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKE 541
Query: 588 -----CH----LLEHAFDSLLEAGEI 604
C LL + D + +AGEI
Sbjct: 542 MMHRGCSPDLMLLNNYMDCVFKAGEI 567
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 157/381 (41%), Gaps = 24/381 (6%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ K +ALR++ ML + L PD+ VT G L+ L K E
Sbjct: 253 YTYNTLMDGYCKLANAKQALRLYQDMLGE-GLVPDV-------VTFGI--LIDGLCKFGE 302
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
K +N+ + P++ VYN++++A +F +L + + P
Sbjct: 303 M------KAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPD 356
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + + + + F KM K G ++TY L+ +EGK+++A+
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICS 416
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK--IKSLRHSKPLEITFTGLIISSM 466
M + GV + L C Q AM + + IKSL P +T+T +I
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSL---SPDVVTYTAMIDGHC 473
Query: 467 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G + + + ++ M D+ PN T++ +L ++ S A ELF E +
Sbjct: 474 KYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNV 533
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+G P + Y++++ Q+ ++ M G Q D+ + +L +
Sbjct: 534 DAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV 593
Query: 586 GKCHLLEHAFDSLLEAGEIPH 606
++ HA +L+ G IP+
Sbjct: 594 KYILMMLHA--DMLKFGVIPN 612
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 152/382 (39%), Gaps = 18/382 (4%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N +L V + +++ ++ +++++ +GL PS T+G ++ + G E F +M
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
G + Y +L+R + KI EA + R M + GV Y L C +
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
A+ + + + P +TF LI G + ++F +M K PNI N+++
Sbjct: 271 ALRLYQDMLG-EGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLI 329
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
Y + S+A LF E R S PD +TYS ++ + + E
Sbjct: 330 DAYCKVGDVSEAMALFLELERFEVS-------------PDVFTYSILIRGLCSVSRTEEA 376
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
+++ M G + + L+ + GK + E G P+ + F+ ++
Sbjct: 377 GNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDG 436
Query: 617 AIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASS 676
N + A+ + + M +T + + + S + KL + + + +
Sbjct: 437 YCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPN 496
Query: 677 EITVSNLSRALHALCRSEKERD 698
T+S L L LC+ K D
Sbjct: 497 CYTISCL---LDGLCKDGKISD 515
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 138/337 (40%), Gaps = 42/337 (12%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL +L K GR RI+ M+ + L P + + ++ + G L ++ + MR K
Sbjct: 153 LLYVLVKTGRFELLWRIYEEMISN-GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK 211
Query: 294 ---PSKRI-----------------KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
P+ + ++MHR + + P++ YN +++ K
Sbjct: 212 GIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQA 271
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+++ + GL P T+G+ ++ + + G+ F M K Y L+ A
Sbjct: 272 LRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDA 331
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS---LRH 450
+ + G ++EA+A +E+ V Y L LC+ R ++A + EK+ L +
Sbjct: 332 YCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILAN 391
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
S +T+ LI G +D + I M ++ EPN+ T + ++ Y + A
Sbjct: 392 S----VTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAM 447
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
++ E + L PD TY++M++
Sbjct: 448 GIYSEMVIKS-------------LSPDVVTYTAMIDG 471
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 159/366 (43%), Gaps = 25/366 (6%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
+ E ++D L + ++ ++ + M G+ L+ G G ++A+
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIG 503
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+L+ + D+++ YT L+ LGK G+ EA + +ML+ C + PD+ Y+
Sbjct: 504 LLNEMVLKTINPDVRT---YTILVDALGKEGKVKEAKSVLAVMLKAC-VKPDVFTYN--- 556
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL--EPDLVVYNAVLNACVPSHQ 329
TL LL VK K H N ++ PD+ Y ++N S
Sbjct: 557 -TLMNGYLLVYEVK-------------KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKM 602
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+FK++ + + P TY ++ + +SG+ V + +M G+ +TY
Sbjct: 603 VDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNS 662
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ + G +++A+A M+ +G+ + L LC GR +DA V + + +
Sbjct: 663 LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 722
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 508
+ + I + +I G +++ +++ M+++ C PN T + ++ + D KA
Sbjct: 723 YHLDVYI-YNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKA 781
Query: 509 KELFEE 514
++L +
Sbjct: 782 EKLLRQ 787
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/271 (18%), Positives = 107/271 (39%), Gaps = 15/271 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++PDL N ++N Q F V ++ K G PS T ++ + G+
Sbjct: 338 IQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKAL 397
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F K+ G + ++Y L+ + G A+ +R ++ R +Y + L
Sbjct: 398 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 457
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
C +A + ++ +++ +T++ LI G + + I + M P+
Sbjct: 458 CKYQLVSEAYGLFSEM-TVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPD 516
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T ++ + +AK + + A +KPD +TY++++
Sbjct: 517 VRTYTILVDALGKEGKVKEAKSVLAVMLK-------------ACVKPDVFTYNTLMNGYL 563
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++ + ++V+ M+L G D + L+
Sbjct: 564 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 594
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 18/178 (10%)
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHE---FFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
KP+ Y ++ + KY LV E F +M G + +TY L+ F GK+ E
Sbjct: 130 KPNVEMYNTIIDALC---KYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKE 186
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE-KIKSLRHSKPLEITFTGL 461
A+ + M + + Y L LC G+ ++A V+ +K+ S IT++ L
Sbjct: 187 ALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSN--VITYSTL 244
Query: 462 IISSMDGGHIDDCISIFQHMKD-----HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
MDG + + QH+ + P++ + N M+ + + KA LF+E
Sbjct: 245 ----MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKE 298
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 170/430 (39%), Gaps = 33/430 (7%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L + Y L+ K GR EA + M + P++ +Y+ + L + G +KE
Sbjct: 42 LPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK-GMQPNLISYNVIINGLCREGSMKEAW 100
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+++E M K PD V YN +LN + + ++ ++G
Sbjct: 101 EILEEMGYKG---------------FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 145
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ PS TY + M ++ + EFF +M G TY L+ F +G +NEA
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 205
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ M + G + Y C R ++A+ VV+++ + P ++++ +I
Sbjct: 206 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE-KGLAPDVVSYSTIISG 264
Query: 465 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G +D + Q M + P+ T +++++ ++A +L +E
Sbjct: 265 FCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG---- 320
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
L PDE+TY++++ A +++ M G D ++ L+ +
Sbjct: 321 ---------LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLN 371
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY-APFHITE 642
+ + + L+ +P + + + LI+ ++ VALI H +
Sbjct: 372 KQARTREAKRLLFKLIYEESVPSDVTY-DTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 430
Query: 643 RQWTELFESN 652
R + + E N
Sbjct: 431 RVFESMVERN 440
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 129/316 (40%), Gaps = 24/316 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P++ YN ++ + + F ++ ++G P+ TY ++ + G+ D
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M+ G ++Y V++ EG + EA + M +G Y L
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 430 CNNGRWQDAMLV-VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEP 487
C G + A+++ E +++ P +T+T LI S +++ + F M+ P
Sbjct: 126 CKEGNFHQALVIHAEMVRN--GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 183
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N T ++ +SR + ++A + E T SG++ P TY++ +
Sbjct: 184 NERTYTTLIDGFSRQGLLNEAYRILNEMTE---SGFS----------PSVVTYNAFIHGH 230
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEI 604
+ E V + M G D ++ ++ R G+ L+ AF ++E G
Sbjct: 231 CVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE---LDRAFQMKQEMVEKGVS 287
Query: 605 PHPLFFTEMLIQAIVQ 620
P + ++ LIQ + +
Sbjct: 288 PDAVTYSS-LIQGLCE 302
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 152/378 (40%), Gaps = 25/378 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P++V YN +++A + F + K + G++P+ +Y + + + + G E
Sbjct: 43 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 102
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M G +TY L+ + +EG ++A+ M + GV + Y L +C
Sbjct: 103 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 162
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIG 490
AM ++++ +R +P E T+T LI G +++ I M + P++
Sbjct: 163 ARNLNRAMEFFDQMR-IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 221
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T NA + + + +A + +E L PD +YS+++
Sbjct: 222 TYNAFIHGHCVLERMEEALGVVQEMVEKG-------------LAPDVVSYSTIISGFCRK 268
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL--LEHAFD---SLLEAGEIP 605
+ + + + M G D ++ L+ G C + L A D +L+ G P
Sbjct: 269 GELDRAFQMKQEMVEKGVSPDAVTYSSLI-----QGLCEMRRLTEACDLSQEMLDMGLPP 323
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLL 665
+T ++ V+ + KA+ L + M + F ++ L + + ++LL
Sbjct: 324 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 383
Query: 666 NALCNCNAASSEITVSNL 683
L + S++T L
Sbjct: 384 FKLIYEESVPSDVTYDTL 401
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 186/461 (40%), Gaps = 61/461 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY-- 217
V+++ L + W+ + M G E LL G +G++ QA+ + +
Sbjct: 85 VIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRN 144
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
G+ S YT L+ + KA + A+ F+ M L P+ Y ++ +
Sbjct: 145 GVS-----PSVVTYTALINSMCKARNLNRAMEFFDQM-RIRGLRPNERTYTTLIDGFSRQ 198
Query: 278 GLLKELVKLIERMRQ---KPSKRIKN--MH---------------RKNWDPVLEPDLVVY 317
GLL E +++ M + PS N +H ++ + L PD+V Y
Sbjct: 199 GLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSY 258
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
+ +++ + F + +++ + G+ P A TY ++ + + + + ++M
Sbjct: 259 STIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLD 318
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
G TY L+ A+ EG +N+A+ M +G + A Y L L R ++
Sbjct: 319 MGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTRE 378
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLI-----------ISSMDG----GHIDDCISIFQHM- 481
A ++ K+ S P ++T+ LI ++ + G G + + +F+ M
Sbjct: 379 AKRLLFKL-IYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMV 437
Query: 482 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
++H +P N ++ + R KA L++E SG+ P T
Sbjct: 438 ERNH-KPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH---SGFV----------PHTVTV 483
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
++++A E V G L C+L++ + A +LVE
Sbjct: 484 ITLIKALFKEGMNEEMSEVI-GDTLRSCRLNEAELAKVLVE 523
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/327 (18%), Positives = 125/327 (38%), Gaps = 15/327 (4%)
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M +S + TY +L+R F G++ + + ME+ G + Y L C GR
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVN 493
+A +++ + S + +P I++ +I G + + I + M P+ T N
Sbjct: 61 IDEAFGLLKSMSS-KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+L Y + F +A + E R S P TY++++ + A
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVS-------------PSVVTYTALINSMCKARNL 166
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
+ M + G + ++ + L+ SR G + + + E+G P + +
Sbjct: 167 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 226
Query: 614 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNA 673
+ V E+A+ ++ M ++ + + D+ ++ +
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286
Query: 674 ASSEITVSNLSRALHALCRSEKERDLS 700
+ +T S+L + L + R + DLS
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLS 313
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 167/403 (41%), Gaps = 32/403 (7%)
Query: 214 DWVYGLKDKRDLKSR---FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
D V + R LK R YT L+ L +A RP AL + M ++ + + ++
Sbjct: 28 DAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-QEVGYEVGVHLFTTL 86
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
L + G + + + L++ ++ LEPD+V+YN ++ +
Sbjct: 87 VRALAREGQVADALALVDEVK---------------GSCLEPDIVLYNVCIDCFGKAGNV 131
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
F +L+ GLKP +Y + V+ ++G+ E F +M A Y +
Sbjct: 132 DMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 191
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ + G+ +A + + +RG + + + + CL + +A+ + E +K +
Sbjct: 192 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK--KD 249
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKA 508
++P T+ +I GG +++ I M +H PN+ TVN M+ + +A
Sbjct: 250 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEM-EHASLFPNLLTVNIMVDRLCKARKLEEA 308
Query: 509 KELFEETTR--ANSSGYTFLS---GDGAPLKPDEY--TYSSMLEASATAHQWEYFEYVYK 561
++FE ++ N T+ S G G + DE + ML+A A+ Y + +
Sbjct: 309 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI-R 367
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ G + D K L+ LL D + +AGE+
Sbjct: 368 NFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEV 410
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/479 (19%), Positives = 188/479 (39%), Gaps = 83/479 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + A +L+ L+++ + S + +L LGK + EAL +F +M
Sbjct: 191 MIMGYGSAGRFEDAYKLLER---LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 247
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P+ + Y+ + L G ++E ++++ M L P+L+
Sbjct: 248 KDAE--PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS---------------LFPNLL 290
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ + + + + +F+ + G P TY ++ + + G+ D + F KM
Sbjct: 291 TVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 350
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G + Y L+R F+ G+ + + + +RG ++ C+ G
Sbjct: 351 LDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEV 410
Query: 436 QDAMLVVEKIKS---LRHSKPLEITFTGL-----------IISSM--------------- 466
+ ++ E I+S L + I GL I +M
Sbjct: 411 EKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAV 470
Query: 467 -DG----GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
DG G + I + MK+ C +P + T A++ ++ D +A LFEE A S
Sbjct: 471 VDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE---AKS 527
Query: 521 SGY--------TFLSGDG-----------------APLKPDEYTYSSMLEASATAHQWEY 555
G + + G G L P+ YT++S+L+A A +
Sbjct: 528 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 587
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ M C + ++ L+ R K + + + + G +P+ + +T M+
Sbjct: 588 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 646
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/430 (18%), Positives = 165/430 (38%), Gaps = 67/430 (15%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
+ ++VDRL + + +K +Q G L+ GLG KG +A + +
Sbjct: 292 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE--- 348
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN------------------------- 252
+ D + VYT L+ GR + ++F
Sbjct: 349 KMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAG 408
Query: 253 ------LMLEDCNLY---PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
++ ED Y PD+ +Y + L + G +E + M+Q+
Sbjct: 409 EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG--------- 459
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
D YNAV++ S + + + +++++ ++P+ ATYG ++ + +
Sbjct: 460 ------FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 513
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
+ D + F + G + + Y L+ F + G+I+EA + M ++G+ +
Sbjct: 514 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 573
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 482
L L +A++ + +K ++ P T++ LI + +Q M K
Sbjct: 574 SLLDALVKAEEINEALVCFQSMKEMK-CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK 632
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
PN+ T M+ ++ + A LFE +AN PD ++++
Sbjct: 633 QGLVPNVVTYTTMISGLAKVGNITDAYSLFER-FKANGG------------IPDAASFNA 679
Query: 543 MLEASATAHQ 552
++E + A++
Sbjct: 680 LIEGMSNANR 689
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 99/245 (40%), Gaps = 15/245 (6%)
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L A ++++AV AV M + S Y L L R + A+ ++ +++ +
Sbjct: 16 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKA 508
+ + + FT L+ + G + D +++ +K C EP+I N + + + A
Sbjct: 76 YEVGVHL-FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 134
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+ F E L G LKPD+ +Y+SM+ A + E ++ M
Sbjct: 135 CKFFHE-----------LKAQG--LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 181
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
+ +++ AG+ + L E G IP + F +L + ++A++
Sbjct: 182 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 241
Query: 629 LINAM 633
L M
Sbjct: 242 LFEVM 246
>gi|255661002|gb|ACU25670.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 376
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VV+NA+LN + K F +++ + G + S +++ + M + GK D V
Sbjct: 21 VSPDAVVHNAMLNGYFRVAKIKDCFELWEMMGNEGNR-SVSSFNIMMRGLFDKGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KS ++T+ +LV F + G IN+++ + Z +G V A Y + L
Sbjct: 80 SIWELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLEMAZXKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVV-EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
C A+ V+ + IKS KP + LI + +D I +F+ M C P
Sbjct: 140 CKEANLDKAVXVLNDMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGXVRCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
I T N ++ +N+MF +A +L ++ L P TYS +++
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYDLVKDMLEKG-------------LNPSVITYSMLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
H+ E ++ + G + D H L+ GK L L FD
Sbjct: 245 CLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFD 294
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 102/242 (42%), Gaps = 17/242 (7%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D Y+A++N V + KSG KP+A Y + ++ + K++ F
Sbjct: 128 DAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVF 187
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R+M + +TY L+ + EA V++M ++G+ + Y L LC +
Sbjct: 188 REMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYSMLMKGLCLD 247
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHMKD-HCEPNIG 490
+ + A+ + ++ S + KP ++ ++I + G +S++ M C PN+
Sbjct: 248 HKVERALQLWNQVIS-KGFKP-DVQMHNILIHGLCSVGKTQLALSLYFDMNRWKCAPNLV 305
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N +++ + ++ A ++ R L+PD +Y+ L+ +
Sbjct: 306 THNTLMEGFYKDGDIRNALVIWARXLRNG-------------LEPDIISYNITLKGLCSC 352
Query: 551 HQ 552
++
Sbjct: 353 NR 354
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 61/324 (18%), Positives = 134/324 (41%), Gaps = 23/324 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+++GL DKG + +S+ + L K D ++ + L+ K G +++L + M
Sbjct: 65 MMRGLFDKGKVDEVISI----WELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLE-M 119
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
Z D AY ++ L + L + V ++ M + K P+
Sbjct: 120 AZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCK---------------PNA 164
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
VYN ++N V + +++ VF+++ P+ TY + + ++ + ++ +
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKD 224
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G +TY +L++ + K+ A+ + +G ++ L LC+ G+
Sbjct: 225 MLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGK 284
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVN 493
Q A+ + + + P +T L+ G I + + I+ + +++ EP+I + N
Sbjct: 285 TQLALSLYFDMNRWK-CAPNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGLEPDIISYN 343
Query: 494 AMLKVYSRNDMFSKAKELFEETTR 517
LK + A + R
Sbjct: 344 ITLKGLCSCNRICDAILFLHDAVR 367
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 33/337 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT L+ K G A ++F+ M E + PD A+ ++ L G + E KL
Sbjct: 217 IYTTLIDGFCKLGNTQAAYKLFSEM-EAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +K EPD V Y A+++ + K F++ Q+ + GL P+
Sbjct: 276 MIKKG---------------FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNV 320
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + +SG+ D +E +M + G + TY +V + G I +AV +
Sbjct: 321 VTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEE 380
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M++ G+ Y L G A ++ ++ R +P +TF L+ G
Sbjct: 381 MKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLD-RGLQPTVVTFNVLMNGLCMSG 439
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS-RNDMFSKAKELFEETTRANSSGYTFLS 527
++D + + M + PN T N+++K Y RN+M R ++ Y +
Sbjct: 440 KLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNM------------RISTEIYRGMC 487
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
G PD TY+ +++ A + +++K M
Sbjct: 488 AQGVV--PDSNTYNILIKGHCKARNMKEAWFLHKEMV 522
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 178/464 (38%), Gaps = 76/464 (16%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLE--------DCNLY-------------------- 261
V+ +L +AG +EA + F+ +L CNLY
Sbjct: 41 VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSE 100
Query: 262 -PDIA------AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
P + +Y+ + +L ++G ++E L+ RM K PD+
Sbjct: 101 FPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI---------------PDV 145
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V Y +++ + + V + K+++ GLKP+ TY + ++ +SGK + R+
Sbjct: 146 VSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLRE 205
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K G + Y L+ F + G A ME R +V + + L C L +G+
Sbjct: 206 MMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGK 265
Query: 435 WQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 492
+A L E IK + +P E+T+T LI G + + M + PN+ T
Sbjct: 266 VVEADKLFNEMIK--KGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTY 323
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRA----NSSGY-TFLSG-----------------DG 530
A+ ++ A EL E R N S Y T ++G
Sbjct: 324 TALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKE 383
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
A L PD TY+++++A + + + M G Q L+ +GK
Sbjct: 384 AGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLED 443
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
E +LE G +P+ + ++ Q +++N + + M
Sbjct: 444 GERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMC 487
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 114/549 (20%), Positives = 212/549 (38%), Gaps = 65/549 (11%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
F R++ ++GL + LK L +A+ VL ++ + D + + Y ++
Sbjct: 179 FARLL-RAGLRTRTIEANTFLKCLCHAKRTDEAVDVL--LHRMSDLGCVPNAISYNTVIK 235
Query: 237 ILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-- 293
L R EAL + M E PD+ ++++V + G + + LI M QK
Sbjct: 236 SLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGV 295
Query: 294 -PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
P N + R+ D +EPD + Y A+++ S WK
Sbjct: 296 EPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAK 355
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F+++ GL P T+ M + + G+ E F+ M G ++Y +L+ +
Sbjct: 356 MFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYA 415
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
EG+ + +M +G+V + L G +AMLV +++ + +P
Sbjct: 416 TEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQG-QGVRPDV 474
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T++ LI + G + D + F M EPN ++++ + + KAKEL E
Sbjct: 475 VTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSE 534
Query: 515 -----TTRAN----SSGYTFLSGDGAPL--------------KPDEYTYSSMLEASATAH 551
R N SS L +G + +P T++S+++
Sbjct: 535 MMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVG 594
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ E V M G + D + L+ ++GK ++ G I F
Sbjct: 595 KMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGK-----------IDDGLI----LFR 639
Query: 612 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 671
EML + + + ++ L ++ + E+ +S + D + LL LC
Sbjct: 640 EMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT-AVDIDTYKILLKGLCRN 698
Query: 672 NAASSEITV 680
+ IT+
Sbjct: 699 DLTDEAITL 707
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 137/336 (40%), Gaps = 28/336 (8%)
Query: 187 MFTEGQMLKL------LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M T+G M L L G +G + ++ + + DK + + + L++ K
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLF---HSMADKGIVANCHCFNILISAHAK 451
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G EA+ +F M + + PD+ Y ++ ++G L +E+ Q S
Sbjct: 452 RGMMDEAMLVFTEM-QGQGVRPDVVTYSTLISAFCRMG---RLADAMEKFSQMISIG--- 504
Query: 301 MHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
LEP+ VVY+++++ C+ K V + + K +P+ + + +
Sbjct: 505 ---------LEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSL 555
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
G+ H+ F + G+ +T+ L+ + GK+ +A + M G+
Sbjct: 556 CNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDV 615
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y L C +G+ D +++ ++ + KP +T++ ++ G +F
Sbjct: 616 VTYNTLVSGYCKSGKIDDGLILFREMLH-KKVKPTTVTYSIVLDGLFHAGRTSAAKKMFH 674
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
M D +I T +LK RND+ +A LF +
Sbjct: 675 EMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 710
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/310 (17%), Positives = 123/310 (39%), Gaps = 21/310 (6%)
Query: 333 VFWVFKQLRKSGLKPSAA-----TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
V +F ++ + P A TYG+ M+ ++ + DL FF ++ ++G +
Sbjct: 135 VLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEA 194
Query: 388 KVLVRAFWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI- 445
++ + +EAV + M G V A Y + LC + R Q+A+ +V+++
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMA 254
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
K P ++F +I G + ++ M + EP++ T N+++ +
Sbjct: 255 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARA 314
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
KA+ + + ++PD TY++++ + + W+ +++ M
Sbjct: 315 MDKAELVLRQMVDKG-------------VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMT 361
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 624
G + + G+ E F + G +P + ++ +L + +
Sbjct: 362 SKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFA 421
Query: 625 KAVALINAMA 634
L ++MA
Sbjct: 422 DMNNLFHSMA 431
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/471 (20%), Positives = 183/471 (38%), Gaps = 90/471 (19%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
+A L + SE+ + ++ M ++G + + L+GL G+ A L++
Sbjct: 17 QAFPALAVKYSEQGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGA---LEF 73
Query: 216 VYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ K+ L++ Y+ L+A L A R ++AL + M E L D Y + +L
Sbjct: 74 LREAKNSFSLRASVSTYSILVAALTAAKRNNDALELLEQM-ESVGLEADKDTYSLIIHSL 132
Query: 275 GQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPVLE-------------------- 311
+ G++ + L+ERM + P RI +DPV+E
Sbjct: 133 CKSGMVDKAKVLVERMISRNCVPDARI-------YDPVIEELSKTGRVDEAVEIAKEADA 185
Query: 312 ---PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
+V YN+++ + + + K VF ++ ++G P TY + E + + G +
Sbjct: 186 KHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFA 245
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
++ +M + G +T+ L+ E+ + + AV ++ M RG
Sbjct: 246 YKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRG-------------- 291
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
C+ P IT+T L+ D+C+ +FQ + D P
Sbjct: 292 -CD---------------------PNAITYTILLKWLARNARTDECVELFQRLLDRKLAP 329
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ T N ++ + +A LF L+ D P P+ TY +++
Sbjct: 330 NVYTYNTVMSALCKAGRLDQAHRLFG----------VMLASDCTP--PNAITYRALIHGL 377
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
+ E + MA GC D + ++ + G+ ++ AF+ L
Sbjct: 378 CLKMELERAVLLLDAMAKRGCAPDVACYGTIVAAFCKQGR---IDEAFELL 425
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 52/261 (19%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D + S Y L+ KA R +++F M PDI Y+ + L + GL
Sbjct: 184 DAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMART-GPSPDIYTYNILFEGLSRHGLW 242
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ KL+ RM N D VL PD+V +N+++N V +++ + +++
Sbjct: 243 RFAYKLLPRM--------------NQDGVL-PDVVTFNSLINGLVEDNRYHRAVTLIQEM 287
Query: 341 RKSGLKPSAATYGL-----------------------------------AMEVMLQSGKY 365
G P+A TY + M + ++G+
Sbjct: 288 VSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRL 347
Query: 366 DLVHEFFRKM-AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
D H F M A A+TY+ L+ + ++ AV + M +RG + Y
Sbjct: 348 DQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGT 407
Query: 425 LACCLCNNGRWQDAMLVVEKI 445
+ C GR +A ++E++
Sbjct: 408 IVAAFCKQGRIDEAFELLERM 428
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 33/243 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L + LS + +K + MNQ G++ L+ GL + + +A++++
Sbjct: 231 ILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLI------ 284
Query: 220 KDKRDLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+++ SR YT LL L + R E + +F +L D L P++ Y++V
Sbjct: 285 ---QEMVSRGCDPNAITYTILLKWLARNARTDECVELFQRLL-DRKLAPNVYTYNTVMSA 340
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + G L + +L M + P P+ + Y A+++ + +
Sbjct: 341 LCKAGRLDQAHRLFGVMLAS-----------DCTP---PNAITYRALIHGLCLKMELERA 386
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ + K G P A YG + + G+ D E +M +G+ + ++ LVRA
Sbjct: 387 VLLLDAMAKRGCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAGDKV---MFRTLVRA 443
Query: 394 FWE 396
+
Sbjct: 444 LCK 446
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 140/363 (38%), Gaps = 30/363 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
LE D Y+ ++++ S + +++ P A Y +E + ++G+ D
Sbjct: 118 LEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAV 177
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E ++ A + +TY LV F + ++ + M + G Y L L
Sbjct: 178 EIAKE-ADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGL 236
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+G W+ A ++ ++ P +TF LI ++ +++ Q M C+PN
Sbjct: 237 SRHGLWRFAYKLLPRMNQ-DGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPN 295
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T +LK +RN + ELF+ L P+ YTY++++ A
Sbjct: 296 AITYTILLKWLARNARTDECVELFQRLL-------------DRKLAPNVYTYNTVMSALC 342
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE-----HAFDSLLEAGE 603
A + + ++ M S C T + A G C +E D++ + G
Sbjct: 343 KAGRLDQAHRLFGVMLASDC----TPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGC 398
Query: 604 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP----FHITERQWTEL-FESNEDRISR 658
P + ++ Q ++A L+ M +A F R +L S ++IS
Sbjct: 399 APDVACYGTIVAAFCKQGRIDEAFELLERMPFAGDKVMFRTLVRALCKLQLRSFSEQISC 458
Query: 659 DKL 661
D++
Sbjct: 459 DEI 461
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 155/375 (41%), Gaps = 36/375 (9%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ + QL +G+ P A + + M M++SGK F +M + G +T+ L+
Sbjct: 229 YAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSG 288
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ +N A A M + GV Y LC GR QDA+ + E+++ R P
Sbjct: 289 MCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRE-RGVNP 347
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ FT LI + G++ + + + M + ++ NA+ R A ++
Sbjct: 348 NTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIV 407
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
EE R N LKPD+ TY+++++ + + + + M+ G LD+
Sbjct: 408 EE-MRNNG------------LKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDE 454
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALIN 631
+ L+ S++G+ E ++EAG P +T M+I A + S+ + L+
Sbjct: 455 VTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYT-MVIDAFCKNSDVKTGFKLLK 513
Query: 632 AM-------AYAPFHITERQWTELFE-SNEDRISRDKLEKLLNALCNCNAASSEITVSNL 683
M +++ + L + N D LLNA+ N +IT + L
Sbjct: 514 EMQNKGRKPGVVTYNVVMNGFCILGQMKNAD--------MLLNAMLNIGVCPDDITYNIL 565
Query: 684 SRALHALCRSEKERD 698
L C+ K RD
Sbjct: 566 ---LDGHCKHGKVRD 577
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ L++ + KA + A + LM + + PD+ Y + L + G +++ V++ E
Sbjct: 281 TFNTLMSGMCKASDLNSANALRGLMAK-AGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEE 339
Query: 290 MRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
MR++ P+ + +HR+ ++ DLV YNA+ N
Sbjct: 340 MRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRD 399
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
K + +++R +GLKP TY ++ + G+ D+ E ++M+ G A+ +TY
Sbjct: 400 LKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTT 459
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ + G+ ++ + M + G+ + Y + C N + +++++++ +
Sbjct: 460 LISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQN-K 518
Query: 450 HSKPLEITF 458
KP +T+
Sbjct: 519 GRKPGVVTY 527
>gi|356574085|ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Glycine max]
Length = 733
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/453 (20%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 219 LKDKRDLKSR-FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+++K +K R F+Y +++ L + G AL +++ + ED L + + + L +
Sbjct: 225 MRNKFGVKPRVFLYNRVMDALVRTGHLDLALSVYDDLKED-GLVEESVTFMVLVKGLCKC 283
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + E+++++ RMR++ K PD+ Y A++ VP+ V+
Sbjct: 284 GRIDEMLEVLGRMRERLCK---------------PDVFAYTALVKILVPAGNLDACLRVW 328
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+++++ ++P Y + + + G+ +E FR+M G + + Y LV AF E
Sbjct: 329 EEMKRDRVEPDVKAYATMIVGLAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEAFVAE 388
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEI 456
GK+ A ++++ G +Y L LCN R Q A + + ++R +P +
Sbjct: 389 GKVELAFDLLKDLVSSGYRADLGIYICLIEGLCNLNRVQKAYKLFQ--LTVREGLEPDFL 446
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRN-------DMFSKAK 509
T L+++ + +++ + + M+ P I ++ V + F + K
Sbjct: 447 TVKPLLVAYAEANRMEEFCKLLEQMQKLGFPVIADLSKFFSVLVEKKGPIMALETFGQLK 506
Query: 510 E----------LFEETTR----ANSSGYTFLSGDGAPLKPDEYTYSSML----------E 545
E +F ++ + F G LKPD +TY + + E
Sbjct: 507 EKGHVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAILCLVDLGEIKE 566
Query: 546 ASATAHQWEYFEYV-----YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
A A ++ + Y + CQ+ + A LLV D L
Sbjct: 567 ACACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDEAMLLVR--------------DCLGN 612
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ P ++ +I A + EK + ++N M
Sbjct: 613 VSDGPLEFKYSLTIIHACKSNVAEKVIDVLNEM 645
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 56/260 (21%)
Query: 333 VFWVFKQLR-KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
V+ V++++R K G+KP Y M+ ++++G DL + + + G ++T+ VLV
Sbjct: 218 VYHVYEKMRNKFGVKPRVFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTFMVLV 277
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
+ + G+I+E + + M +R LC
Sbjct: 278 KGLCKCGRIDEMLEVLGRMRER---------------LC--------------------- 301
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
KP +T L+ + G++D C+ +++ MK D EP++ M+ ++ + E
Sbjct: 302 KPDVFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRVQEGYE 361
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
LF E + G G + D Y +++EA + E + K + SG +
Sbjct: 362 LFRE-----------MKGKGCLV--DRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRA 408
Query: 571 DQTKHAWLLVEASRAGKCHL 590
D + L+ G C+L
Sbjct: 409 DLGIYICLI-----EGLCNL 423
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 129/339 (38%), Gaps = 23/339 (6%)
Query: 145 WHPEKRWRSEAE--AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGD 202
W KR R E + A ++ L++ + ++ R M G + L++
Sbjct: 328 WEEMKRDRVEPDVKAYATMIVGLAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEAFVA 387
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
+G A +L + + DL +Y L+ L R +A ++F L + + L P
Sbjct: 388 EGKVELAFDLLKDLVSSGYRADLG---IYICLIEGLCNLNRVQKAYKLFQLTVRE-GLEP 443
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D + V + ++E KL+E+M+ K PV+ DL + +VL
Sbjct: 444 DFLTVKPLLVAYAEANRMEEFCKLLEQMQ------------KLGFPVIA-DLSKFFSVL- 489
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
V F QL++ G S Y + M+ + + G+ F +M
Sbjct: 490 --VEKKGPIMALETFGQLKEKG-HVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKP 546
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ TY + + G+I EA A + + + + + Y L LC G +AML+V
Sbjct: 547 DSFTYCTAILCLVDLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDEAMLLV 606
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
PLE ++ II + + I + M
Sbjct: 607 RDCLGNVSDGPLEFKYSLTIIHACKSNVAEKVIDVLNEM 645
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 137/328 (41%), Gaps = 31/328 (9%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+D + F Y ++A + +AGR +A+ +F+ M E L P+ Y+++ + G
Sbjct: 192 RDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVL-PNHITYNTMIDGHIKGGD 250
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L+ +L ++M L+P+ + YN +L+ + + + +
Sbjct: 251 LEAGFRLRDQMVCHG---------------LKPNAITYNVLLSGLCRAGRMGETSALLDE 295
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + P TY + + + ++G + F K K+G IG T +L+ ++GK
Sbjct: 296 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGK 355
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
++ A ++++ G+V T +Y L C G + A ++KS RH KP IT+
Sbjct: 356 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS-RHIKPDHITYN 414
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI I + + M+D+ P + T N ++ Y R K + E
Sbjct: 415 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 474
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
LKP+ +Y S++ A
Sbjct: 475 G-------------LKPNVVSYGSIVNA 489
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 162/392 (41%), Gaps = 45/392 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G + ++LD + ++ + F Y+ L L + G L +F L
Sbjct: 276 LLSGLCRAGRMGETSALLDE---MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL 332
Query: 256 EDCNLYPDIAAYHSVAVTL------GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
++ D ++ ++ L G+V + +E+++ + P++ I N +
Sbjct: 333 KNGVTIGD----YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 388
Query: 310 -----------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
++PD + YNA++N + + + +++ +G+ P+ T+
Sbjct: 389 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 448
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++ ++G+ + +M ++G ++Y +V AF + GKI EAVA + +M
Sbjct: 449 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 508
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+ V+ A VY + +G A ++VEK+KS P +T+ LI + I
Sbjct: 509 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS-NGISPSIVTYNLLIKGLCNQSQIS 567
Query: 473 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ I + +H P+ + N ++ KA +L + R + G
Sbjct: 568 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ---RMHKYG--------- 615
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+K TY ++ A + EY+Y+ M
Sbjct: 616 -IKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 646
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 76/418 (18%), Positives = 156/418 (37%), Gaps = 32/418 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP-SAATYGLAMEVMLQSGKYDLVHE 370
PD +N + ACV + + +++ + G P +A +Y + + M ++G+ E
Sbjct: 162 PDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVE 221
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F +M + +TY ++ + G + M G+ A Y L LC
Sbjct: 222 VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 281
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNI 489
GR + +++++ S + P T++ L G +S+F +++K+
Sbjct: 282 RAGRMGETSALLDEMAS-QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD 340
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRAN-----------SSGY-----------TFLS 527
T + +L ++ S A+E+ + A +GY TF
Sbjct: 341 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 400
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+KPD TY++++ A + + + M +G L+ R G+
Sbjct: 401 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 460
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 647
+ E G P+ + + ++ +AVA+++ M + + +
Sbjct: 461 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 520
Query: 648 LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR----SEKERDLSS 701
+ ++ + D+ L+ + N S I NL + LC SE E ++S
Sbjct: 521 IIDAYVEHGPNDQAFILVEKM-KSNGISPSIVTYNL--LIKGLCNQSQISEAEEIINS 575
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 26/260 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L++ L + E + M +G+ T L+ G G + VL +
Sbjct: 416 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM---- 471
Query: 221 DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ LK V Y ++ K G+ EA+ I + M ++ P+ Y+++ + G
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGP 530
Query: 280 LKELVKLIERMRQK---PSKRIKNMHRK---NWDPVLE--------------PDLVVYNA 319
+ L+E+M+ PS N+ K N + E PD V YN
Sbjct: 531 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 590
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++AC + +++ K G+K + TY + + +G+ + + ++KM ++
Sbjct: 591 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 650
Query: 380 EAIGALTYKVLVRAFWEEGK 399
+ ++V A+ + G
Sbjct: 651 VVPSNAIHNIMVEAYSKYGN 670
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/436 (19%), Positives = 167/436 (38%), Gaps = 59/436 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F Y +L L K R +A ++F+ M++ N+ P+ Y+++ +VG ++E +
Sbjct: 191 SVFAYNLVLGGLCKVRRIKDARKLFDEMIQR-NMVPNTVTYNTLIDGYCKVGGIEEALGF 249
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
ERM+++ +E +LV YN++LN S + V ++ SG
Sbjct: 250 KERMKEQN---------------VECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFL 294
Query: 347 PSA----------------------------ATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
P TY + + + + G+ + E K+ ++
Sbjct: 295 PGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVEN 354
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G ++Y +LV A+ +EG + +A+ ME+RG+ + + C G A
Sbjct: 355 GVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHA 414
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
V ++ S +E T+ LI GH C M K +PN+ + +++
Sbjct: 415 ETWVRRMVEKGVSPTVE-TYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLIN 473
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
++ A+ + + G + P+ Y+ ++EAS + + +
Sbjct: 474 CLCKDRKLIDAEIVLADMI-------------GRGVSPNAEIYNMLIEASCSLSKLKDAF 520
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+ M SG + L+ R G+ E F + G P + + ++
Sbjct: 521 RFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGY 580
Query: 618 IVQSNYEKAVALINAM 633
N +K + L + M
Sbjct: 581 AKSVNTQKCLELYDKM 596
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 134/327 (40%), Gaps = 18/327 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P + YN ++NA K +Q+ + GL+P+ T+ + ++G+ D
Sbjct: 356 VTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAE 415
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ R+M + G + TY L+ + ++G + M++ G+ Y L CL
Sbjct: 416 TWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCL 475
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C + + DA +V+ + R P + LI +S + D F M + +
Sbjct: 476 CKDRKLIDAEIVLADMIG-RGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDAT 534
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T N ++ RN KA++LF + ++G G PD TY+S++ A
Sbjct: 535 LVTYNTLINGLGRNGRVKKAEDLFLQ-----------MAGKGC--NPDVITYNSLISGYA 581
Query: 549 TAHQWEYFEYVYKGMALSGCQ-LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ + +Y M + G + T H L+ A R ++ F +L+ +P
Sbjct: 582 KSVNTQKCLELYDKMKILGIKPTVGTFHP--LIYACRKEGVVTMDKMFQEMLQMDLVPDQ 639
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMA 634
+ EM+ N KA++L M
Sbjct: 640 FVYNEMIYSYAEDGNVMKAMSLHQQMV 666
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 166/410 (40%), Gaps = 38/410 (9%)
Query: 218 GLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
GL D ++++ Y LL L + GR +A + ++E+ + P +Y+ + Q
Sbjct: 314 GLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVEN-GVTPSKISYNILVNAYCQ 372
Query: 277 VGLLKELVKLIERMRQK---PSKRIKNM------------HRKNW-----DPVLEPDLVV 316
G +K+ + E+M ++ P++ N H + W + + P +
Sbjct: 373 EGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVET 432
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN+++N + F ++ K+G+KP+ +YG + + + K M
Sbjct: 433 YNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMI 492
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G + A Y +L+ A K+ +A M Q G+ T Y L L NGR +
Sbjct: 493 GRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVK 552
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAM 495
A + ++ + P IT+ LI + C+ ++ MK +P +GT + +
Sbjct: 553 KAEDLFLQMAG-KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPL 611
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
+ + + + K +F+E + + L PD++ Y+ M+ + A
Sbjct: 612 IYACRKEGVVTMDK-MFQEMLQMD-------------LVPDQFVYNEMIYSYAEDGNVMK 657
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+++ M G D+ + L++ R + ++H D + G +P
Sbjct: 658 AMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVP 707
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 135/379 (35%), Gaps = 43/379 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P N +L V S ++ VF + SG +P A YG A++ + D E
Sbjct: 120 PSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFEL 179
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+ M K G Y +++ + +I +A M QR +V Y L C
Sbjct: 180 MKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCK 239
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
G ++A+ E++K L +T+ L+ G +DD + M+ G
Sbjct: 240 VGGIEEALGFKERMKEQNVECNL-VTYNSLLNGLCGSGRVDDAREVLLEMEGS-----GF 293
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+ + +D +N +G L DG ++ DE TY +L
Sbjct: 294 LPGGFLSFVFDD-------------HSNGAGDDGLF-DGKEIRIDERTYCILLNGLCRVG 339
Query: 552 QWEYFEYVYKGMALSG---------------CQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
+ E E V + +G CQ K A L E F+
Sbjct: 340 RIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFN 399
Query: 597 SLL----EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESN 652
+++ E GE+ H + +++ V E +LIN + R + L E +
Sbjct: 400 TVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFV--RCFEFLDEMD 457
Query: 653 EDRISRDKLE--KLLNALC 669
+ I + + L+N LC
Sbjct: 458 KAGIKPNVISYGSLINCLC 476
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D PD V Y + A V F + K + K G+ PS Y L + + + +
Sbjct: 150 DSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIK 209
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ F +M + +TY L+ + + G I EA+ M+++ V Y L
Sbjct: 210 DARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLL 269
Query: 427 CCLCNNGRWQDA 438
LC +GR DA
Sbjct: 270 NGLCGSGRVDDA 281
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 102/267 (38%), Gaps = 20/267 (7%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++F M QSG+ T L+ GLG G ++A + + G D+ Y L
Sbjct: 520 FRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDV---ITYNSL 576
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
++ K+ + L +++ M + + P + +H LI R++
Sbjct: 577 ISGYAKSVNTQKCLELYDKM-KILGIKPTVGTFHP----------------LIYACRKEG 619
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ M ++ L PD VYN ++ + + +Q+ G+ TY
Sbjct: 620 VVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNS 679
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ L+ + + M G TY +L++ + N A R M +RG
Sbjct: 680 LILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERG 739
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLV 441
++ S+ Y+L L G ++A +V
Sbjct: 740 LLLNVSMCYQLISGLREEGMLREAQIV 766
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 126/315 (40%), Gaps = 62/315 (19%)
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV-----------YG-- 218
A+ W VR M + G+ T L+ G G KG + + LD + YG
Sbjct: 414 AETW--VRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSL 471
Query: 219 ----LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNL--YPDIAAYHSVA 271
KD++ + + V L ++G+ P+ I+N+++E C+L D +
Sbjct: 472 INCLCKDRKLIDAEIV---LADMIGRGVSPNA--EIYNMLIEASCSLSKLKDAFRFFDEM 526
Query: 272 VTLGQVGLLKELVKLIERM-RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ G L LI + R K+ +++ + PD++ YN++++ S
Sbjct: 527 IQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNT 586
Query: 331 KGVFWVFKQLRKSGLKPSAATYG-----------LAMEVMLQSG-KYDLVHEFF------ 372
+ ++ +++ G+KP+ T+ + M+ M Q + DLV + F
Sbjct: 587 QKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMI 646
Query: 373 ----------------RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
++M G +TY L+ A+ + +++E V +M+ +G+V
Sbjct: 647 YSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLV 706
Query: 417 GTASVYYELACCLCN 431
Y L LC+
Sbjct: 707 PKVDTYNILIKGLCD 721
>gi|115489040|ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group]
gi|113649514|dbj|BAF30026.1| Os12g0557800 [Oryza sativa Japonica Group]
Length = 682
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 182/458 (39%), Gaps = 41/458 (8%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
P R + LV + R + + + VR M G+ L+ G + G
Sbjct: 201 PADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRV 260
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIA 265
+A +LD +K+K S Y L+ + + +A R+ + L + +L+P +
Sbjct: 261 EEAFRMLD---KMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHP--S 315
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIKNMHRKNWDPVLE-- 311
A H++ L + + KE V+ +RM + S +K + + +L+
Sbjct: 316 ACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSF 375
Query: 312 ------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
P VY V+ + + + + GL S +Y + ++ +++G
Sbjct: 376 IKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAV 435
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
D E ++M G +T+ L+ + + G ++ A ++ + + G + + L
Sbjct: 436 DKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSL 495
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DH 484
LCN + DA + E++ +P T+ L+ + GH++ I + MK D
Sbjct: 496 IDGLCNTHQLDDAFVCFEEMAEW-GVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDG 554
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
P+ + NA++ + R KA+++F + R + PD YTY+S++
Sbjct: 555 VTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFG-------------VVPDSYTYNSLI 601
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+A + + + SGC + W +V A
Sbjct: 602 KALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAA 639
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 21/190 (11%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
VF Q+ + GL+PS A Y + F++M G TY LV
Sbjct: 175 VFVQMPRLGLRPSTAVYTAYLR--------------FQQMPADGCRPDHFTYNSLVHGVC 220
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G ++EAV VR ME G+ Y L CN GR ++A +++K+K + P E
Sbjct: 221 RRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKE-KGVAPSE 279
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI--GTVNAMLKVYSRNDMFSKAKELFE 513
T+ L+ D + H E ++ + ML S+ DM AKE E
Sbjct: 280 ATYRTLVHGVFRCLERDKAYRMLSDWLGH-ETSLHPSACHTMLYCLSKKDM---AKEAVE 335
Query: 514 ETTRANSSGY 523
R ++ GY
Sbjct: 336 FEKRMSARGY 345
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++DK L + + L++ K G H A + +++E PDI + S+ L
Sbjct: 445 MQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEH-GFMPDIITFTSLIDGLCNTH 503
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVF 337
L + E M + W + P+ YN +++ C H K + +
Sbjct: 504 QLDDAFVCFEEMAE-------------WG--VRPNAQTYNVLMHTLCSAGHVNKAID-LL 547
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+++ G+ P A ++ + + K D + F M + G + TY L++A +E
Sbjct: 548 NKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDE 607
Query: 398 GKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
++N+A + E+ G Y+ + L G++ +A +++K S
Sbjct: 608 RRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKYLS 658
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 85/484 (17%), Positives = 177/484 (36%), Gaps = 65/484 (13%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
G + G+++ ++G G + S ++++ L R FV L +
Sbjct: 132 GPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVY 191
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
LR + + C PD Y+S+ + + G++ E V+L+ +M +
Sbjct: 192 TAYLRFQQMPADGCR--PDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEG---------- 239
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
+ P++ Y +++ + + + F + ++++ G+ PS ATY + + + +
Sbjct: 240 -----IRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLE 294
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
D + ++ ++ ++ EAV + M RG + ++ +
Sbjct: 295 RDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGI 354
Query: 425 LACC---------LC-------NNGRWQDAMLVVEKIKSLRHSKPLE--------ITFTG 460
+ C LC NG + + IKSL + K + G
Sbjct: 355 VMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKG 414
Query: 461 LIISSMDGGHIDDCI----------SIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAK 509
L+ S M + DC I + M+D PN+ T N ++ YS+ AK
Sbjct: 415 LLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAK 474
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+ + + F+ PD T++S+++ HQ + ++ MA G +
Sbjct: 475 VVLKMLME-----HGFM--------PDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVR 521
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
+ + L+ AG + + + G P F +++ +KA +
Sbjct: 522 PNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDI 581
Query: 630 INAM 633
N M
Sbjct: 582 FNDM 585
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/388 (19%), Positives = 162/388 (41%), Gaps = 68/388 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++ LG++ +A+ ++ + +++ + + + +++ LG+ G+ A RIF
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLA-SAMISTLGRYGKVTIAKRIFETAF 260
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ A+ ++ G+ GL +E + + M++ L P+LV
Sbjct: 261 AG-GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG---------------LRPNLV 304
Query: 316 VYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAAT----------------------- 351
YNAV++AC ++K V F +++++G++P T
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 352 ------------YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
Y ++ + + G+ DL E +M ++Y ++ F + G+
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+EA+ M G+ Y L GR ++A+ ++ ++ S+ K + +T+
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV-VTYN 483
Query: 460 GLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
L+ G D+ +F MK +H PN+ T + ++ YS+ ++ +A E+F E A
Sbjct: 484 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
L+ D YS++++A
Sbjct: 544 G-------------LRADVVLYSALIDA 558
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 114/287 (39%), Gaps = 20/287 (6%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
KF M ++G+ LL G W A ++ D + + ++D+ F Y LL
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDV---FSYNTLL 381
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
+ K G+ A I M + P++ +Y +V + G E + L MR
Sbjct: 382 DAICKGGQMDLAFEILAQMPVK-RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG- 439
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ D V YN +L+ + + + +++ G+K TY
Sbjct: 440 --------------IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + GKYD V + F +M + LTY L+ + + G EA+ R + G+
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
+Y L LC NG A+ +++++ S P +T+ +I
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGIS-PNVVTYNSII 591
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 168/409 (41%), Gaps = 46/409 (11%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-----FVYT 232
+R+++ + + +L L D+G +QAM VLD R L+S+ T
Sbjct: 159 LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD--------RQLQSKCYPDVVTCT 210
Query: 233 KLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
L+ K +A+++FN M + C PD+ Y+ + + G L E + ++++
Sbjct: 211 VLIDATCKESGVGQAMKLFNEMRGKGCK--PDVVTYNVLIKGFCKEGRLDEAIIFLKKL- 267
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
PS ++ D++ +N +L + +W + + + G PS T
Sbjct: 268 --PSYGCQS------------DVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVT 313
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
+ + + + Q G M K G + ++ L++ F I+ A+ + M
Sbjct: 314 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
RG Y L LC +G+ DA++++ ++ S + P I++ +I + G
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS-KGCSPSLISYNTVIDGLLKVGKA 432
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ + + + M +P++ T +++ SR +A + F +L G G
Sbjct: 433 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFH-----------YLKGFG 481
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+KP+ + Y+S++ A Q M +GC+ + + L+
Sbjct: 482 --IKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLI 528
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/445 (20%), Positives = 161/445 (36%), Gaps = 80/445 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ K+G EALR+ L+ ++ P+ A Y +V +L G LK+ +++++R
Sbjct: 142 YNVLINAYCKSGEIEEALRV----LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q PD+V +++A +F ++R G KP
Sbjct: 198 LQSKC---------------YPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKP--- 239
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
D+V TY VL++ F +EG+++EA+ ++ +
Sbjct: 240 ---------------DVV-----------------TYNVLIKGFCKEGRLDEAIIFLKKL 267
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLIISSMDGG 469
G + + LC+ GRW DAM ++ + LR P +TF LI G
Sbjct: 268 PSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATM--LRKGCFPSVVTFNILINFLCQKG 325
Query: 470 HIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG------ 522
+ +++ + M H PN + N +++ + +A E E
Sbjct: 326 LLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYN 385
Query: 523 --YTFLSGDG--------------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
T L DG P +Y+++++ + E + + M
Sbjct: 386 ILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYK 445
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
G + D ++ SR GK H F L G P+ + +++ A
Sbjct: 446 GLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLA 505
Query: 627 VALINAMAYAPFHITERQWTELFES 651
+ + M TE +T L +
Sbjct: 506 IDFLVDMVANGCKPTEASYTTLIKG 530
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 134/342 (39%), Gaps = 23/342 (6%)
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
++++G+ + F M G+ + L+R F + G+ A + +E+ G V
Sbjct: 79 LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
A+ Y L C +G ++A+ V++ P T+ ++ S D G + + +
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHTSV----APNAATYDAVLCSLCDRGKLKQAMQVL 194
Query: 479 -QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
+ ++ C P++ T ++ + +A +LF E + G G KPD
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNE-----------MRGKGC--KPDV 241
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
TY+ +++ + + K + GCQ D H +L G+ +
Sbjct: 242 VTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLAT 301
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMAYAPFHITERQWTELFESNEDRI 656
+L G P + F +LI + Q KA+ ++ M R + L + +R
Sbjct: 302 MLRKGCFPSVVTF-NILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRK 360
Query: 657 SRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
D+ + L + + +I N+ L ALC+ K D
Sbjct: 361 GIDRAIEHLEIMVS-RGCYPDIVTYNI--LLTALCKDGKVDD 399
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 21/258 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L++ L ++ + K + +M + G L++G ++ +A+ L+ +
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR 375
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVG 278
D+ Y LL L K G+ +A+ I + L + C+ P + +Y++V L +VG
Sbjct: 376 GCYPDI---VTYNILLTALCKDGKVDDAVVILSQLSSKGCS--PSLISYNTVIDGLLKVG 430
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ V+L+E M K L+PDL+ +V+ + F
Sbjct: 431 KAELAVELLEEMCYKG---------------LKPDLITCTSVVGGLSREGKVHEAIKFFH 475
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
L+ G+KP+A Y M + ++ + L +F M +G +Y L++ EG
Sbjct: 476 YLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEG 535
Query: 399 KINEAVAAVRNMEQRGVV 416
EA + RG+V
Sbjct: 536 LAEEASKLSNELYSRGLV 553
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 18/263 (6%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
++F++ L+ GK GR +A+R F M ++ PD+ ++S+ + GL+ E + L
Sbjct: 358 NQFIFNILIDTYGKFGRLPQAMRTFAQMDKE-GFKPDVVTWNSLIEAHCRAGLITEALDL 416
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+++M+++ P L YN +LNA ++WK + + ++R GL
Sbjct: 417 LKQMQERECV---------------PSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLD 461
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ S +Y E+ ++M G Y L ++ + G +A+
Sbjct: 462 PNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAMEV 521
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
++ME+ GV S+ L G++ +A V + I + S P +T+T L+ + +
Sbjct: 522 FKSMEKDGVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGMS-PDVVTYTTLMKALI 580
Query: 467 DGGHIDDCISIFQHM-KDHCEPN 488
+D +++ M + C P+
Sbjct: 581 KAEQLDQVPDVYEQMVRAGCTPD 603
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 167/415 (40%), Gaps = 41/415 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y ++ +AG P +A + LM + C+L PD+ +Y S+ TL V L +
Sbjct: 186 LYNDVINAYCRAGDPDKAFQYMGLM-QACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAE 244
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K K +L NA+L+A + V + + +GLK S
Sbjct: 245 MKSKSYK---------------INLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLST 289
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+YGL ++ ++G+ D F M A Y L+ A+ + + + +++
Sbjct: 290 FSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKD 349
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + ++ L GR AM ++ KP +T+ LI + G
Sbjct: 350 MYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDK-EGFKPDVVTWNSLIEAHCRAG 408
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE-------------T 515
I + + + + M++ C P++ T N +L ++ + + L +E T
Sbjct: 409 LITEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYT 468
Query: 516 TRANSSGYTFLSGDGAP---------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
T +S G + + + L+P Y ++ + A E V+K M
Sbjct: 469 TLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKD 528
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
G +L+ + L+ AGK FD +LE G P + +T L++A++++
Sbjct: 529 GVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGMSPDVVTYTT-LMKALIKA 582
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 122/281 (43%), Gaps = 28/281 (9%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+Y+ ++ A + QW G + K + S +KP+ + + ++ + G+ F +M
Sbjct: 326 IYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQM 385
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G +T+ L+ A G I EA+ ++ M++R V + Y + L + RW
Sbjct: 386 DKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYNIILNALGWHNRW 445
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
++ L++++++ + P +T+T L+ S + + MK +P+ A
Sbjct: 446 KEMALLLDEMR-FKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCA 504
Query: 495 MLKVYSRNDMFSKAKELFEETTR-------------ANSSG-----------YTFLSGDG 530
+ Y++ + +A E+F+ + N+ G + ++ G
Sbjct: 505 LANSYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVG 564
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+ PD TY+++++A A Q + VY+ M +GC D
Sbjct: 565 --MSPDVVTYTTLMKALIKAEQLDQVPDVYEQMVRAGCTPD 603
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 94/479 (19%), Positives = 191/479 (39%), Gaps = 93/479 (19%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KP 294
L K R EA+ +F+ L+ + P AY+++ T + L+ ++L+ +MR +P
Sbjct: 88 LSKESRVEEAMLLFD-QLKQLGVSPGPMAYNAIVGTCAREDRLETALELMNQMRGSGFQP 146
Query: 295 ----------------------SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
S+ N+ ++ LE D +YN V+NA +
Sbjct: 147 DNVNYTLVFQACAKKRVGVDVISRVCANIEQEG----LEMDTKLYNDVINAYCRAGDPDK 202
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVM---------------LQSGKYDL---------- 367
F ++ L P +Y +E + ++S Y +
Sbjct: 203 AFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLS 262
Query: 368 ----------VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
V + + +G + +Y +L+ A+ G++++A AA NM+ V
Sbjct: 263 AYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPA 322
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
A +Y L N +W + +++ + + + KP + F LI + G + +
Sbjct: 323 NAFIYSRLMVAYRNARQWDGTIRLLKDMYA-SNIKPNQFIFNILIDTYGKFGRLPQAMRT 381
Query: 478 FQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS--SGYTF---LSGDG- 530
F M K+ +P++ T N++++ + R + ++A +L ++ S +T+ L+ G
Sbjct: 382 FAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYNIILNALGW 441
Query: 531 ----------------APLKPDEYTYSSMLEASATAHQW-EYFEYVYKGMALSGCQLDQT 573
L P+ TY++++++ T+ ++ E EY+ K M G Q +
Sbjct: 442 HNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYL-KQMKSQGLQPSTS 500
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI-VQSNYEKAVALIN 631
+ L ++ G C F S+ + G + L +LI A V Y +A ++ +
Sbjct: 501 VYCALANSYAKRGLCEQAMEVFKSMEKDG-VELNLSMLNLLINAFGVAGKYVEAFSVFD 558
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 164/397 (41%), Gaps = 46/397 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL D+G +A+ V D + LK D+ Y L+ K E R+ M
Sbjct: 143 LVKGLCDEGKIDEAIRVRDEMESLKLIPDV---VTYNTLIDGCFKWRGSTEGFRLLEEMK 199
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ ++ + G+ G + E + +M + + PD
Sbjct: 200 SRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESG---------------VSPDCF 244
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++N + + F + ++ + GLKP T + + K + +E K
Sbjct: 245 TYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKA 304
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G + +TY L+ +++ + ++A+ M++RG+V + Y L LC +G+
Sbjct: 305 RKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKT 364
Query: 436 QDAMLVVEKIKSL--RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 492
A V+K+ L + P E++ +I G +D M + +P+I T
Sbjct: 365 DQA---VDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTR 421
Query: 493 NAMLKVYSRNDMFSKAKELFEE-TTRANS-------SGYTFLSGDG-------------- 530
N +L+ R DM KA +LF ++ NS + ++L +G
Sbjct: 422 NILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEV 481
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+PD+YTY++++ A A + E E ++ +G
Sbjct: 482 KKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETG 518
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 96/265 (36%), Gaps = 57/265 (21%)
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA-CCLCNNGRWQ--- 436
+I TY LV+ +EGKI+EA+ ME ++ Y L C +W+
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCF----KWRGST 189
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGL----------------IISSMDGGHIDDCISIFQH 480
+ ++E++KS +P +T + ++ ++ G DC +
Sbjct: 190 EGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTM 249
Query: 481 MKDHC--------------------EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
+ C +P+I T+N ML M K +E +E T +A
Sbjct: 250 INGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLC---MEKKPEEAYELTVKARK 306
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
GY DE TY +++ Q + +++ M G + L+
Sbjct: 307 RGYIL----------DEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIR 356
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIP 605
+GK + LLE G +P
Sbjct: 357 GLCLSGKTDQAVDKLNELLEKGLVP 381
>gi|298706415|emb|CBJ29411.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 135/326 (41%), Gaps = 32/326 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L K GR EAL + M ED + D+ AY + G +E V ++ M
Sbjct: 13 YSIGLTACAKGGRWQEALVLLREMEEDDEIKLDVVAYSAAITACANGGRWQEAVAILSDM 72
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
P+ ++ P+++ NA + A + QW+ + + + K+GL P A
Sbjct: 73 ---PNVGVR------------PNVISCNAAIKAWGEAGQWQHALSILRGMSKAGLSPDAI 117
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE--EGKINEAVAAVR 408
+Y A+ + +G+ + E +M++ G +TY + A G+ +AVA V+
Sbjct: 118 SYNTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVK 177
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+M GV + Y L G+W+ A+ V++ +K S + I ++ I + +
Sbjct: 178 HMSLAGVTPDSITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDI-IGYSAAISACGEA 236
Query: 469 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G + + + K P++ A + + + KA L +E A
Sbjct: 237 GQWEYSVGLLAEAKSLGITPDLVAYTAAVTACADANQRDKATFLLKEMLSAG-------- 288
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQW 553
++PD ++S++ A QW
Sbjct: 289 -----IRPDAAAFTSLIAALGHDGQW 309
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 128/305 (41%), Gaps = 17/305 (5%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+V Y+A + AC +W+ + + G++P+ + A++ ++G++
Sbjct: 45 DVVAYSAAITACANGGRWQEAVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQHALSIL 104
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC-- 430
R M+K+G + A++Y + A G+ +A + M + G+ T Y +
Sbjct: 105 RGMSKAGLSPDAISYNTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARG 164
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
G+W+ A+ +V+ + SL P IT+ LI++ GG +S+ + MK +I
Sbjct: 165 GGGQWRQAVALVKHM-SLAGVTPDSITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDI 223
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+A + + + L E A S G T PD Y++ + A A
Sbjct: 224 IGYSAAISACGEAGQWEYSVGLLAE---AKSLGIT----------PDLVAYTAAVTACAD 270
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
A+Q + ++ K M +G + D L+ G+ +S+ + G + +
Sbjct: 271 ANQRDKATFLLKEMLSAGIRPDAAAFTSLIAALGHDGQWTQAVEILESMPKMGAPRNAMV 330
Query: 610 FTEML 614
+ ++
Sbjct: 331 YNALI 335
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 113/270 (41%), Gaps = 22/270 (8%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+K G+ G W+ A+S+L G+ Y ++ LG AG+ +A + + M
Sbjct: 88 IKAWGEAGQWQHALSIL---RGMSKAGLSPDAISYNTAISALGVAGQSEQAQELMSEM-S 143
Query: 257 DCNLYPDIAAYHSV--AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ P + Y+S A+ G G ++ V L++ M + PD
Sbjct: 144 RLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVKHMSLAG---------------VTPDS 188
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ YN+++ AC QWK V K ++K GL Y A+ ++G+++ +
Sbjct: 189 ITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDIIGYSAAISACGEAGQWEYSVGLLAE 248
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
G + Y V A + + ++A ++ M G+ A+ + L L ++G+
Sbjct: 249 AKSLGITPDLVAYTAAVTACADANQRDKATFLLKEMLSAGIRPDAAAFTSLIAALGHDGQ 308
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
W A+ ++E + + + + + LI S
Sbjct: 309 WTQAVEILESMPKMGAPRN-AMVYNALITS 337
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 120/315 (38%), Gaps = 24/315 (7%)
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA-IGALTYKVLVRAFWEEGKINE 402
G++PS +Y + + + G++ R+M + E + + Y + A G+ E
Sbjct: 5 GIRPSVESYSIGLTACAKGGRWQEALVLLREMEEDDEIKLDVVAYSAAITACANGGRWQE 64
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
AVA + +M GV G+WQ A+ ++ + S P I++ I
Sbjct: 65 AVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQHALSILRGMSKAGLS-PDAISYNTAI 123
Query: 463 ISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR--NDMFSKAKELFEETTRAN 519
+ G + + M + EP + T N+ + +R + +A L + + A
Sbjct: 124 SALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVKHMSLAG 183
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ PD TY+S++ A QW+ V KGM G D ++ +
Sbjct: 184 -------------VTPDSITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDIIGYSAAI 230
Query: 580 VEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
AG+ E++ L EA G P + +T + + +KA L+ M A
Sbjct: 231 SACGEAGQ---WEYSVGLLAEAKSLGITPDLVAYTAAVTACADANQRDKATFLLKEMLSA 287
Query: 637 PFHITERQWTELFES 651
+T L +
Sbjct: 288 GIRPDAAAFTSLIAA 302
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 119/567 (20%), Positives = 208/567 (36%), Gaps = 90/567 (15%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + + DW+ + K S F Y L L KA A F M PD
Sbjct: 16 GKISTIVRLFDWLG--RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR-GYPPD 72
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR--------IKNMHRKN-WDPVLE--- 311
Y V L + G L + +L+ ++R+ K I + + D LE
Sbjct: 73 DFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFK 132
Query: 312 ---------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
PD+V +N++L + F +F+ + K+G +P+ +Y ++ + ++
Sbjct: 133 TMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKA 192
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G+ D + +M + + Y V + ++ EA R M +G A +
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAF 252
Query: 423 YELACCLCNNGRWQDAM-----------LVVEKIKSL-----RHSKPLEITFTGLIISSM 466
+ LC G ++A ++ E K+ R+ P F LI +
Sbjct: 253 STVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC 312
Query: 467 DGGHIDDCISIFQHMKD----HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ D + +FQ MK +C PN+ T N M+ + +A+EL E
Sbjct: 313 KSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG--- 369
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
L PD TYS++++ + + + + M+ G D A +L
Sbjct: 370 ----------LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL 419
Query: 583 SRAGKC-HLLEH------------------AFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
S+AGK + L H D L +AG I + F ++ A +
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDV 479
Query: 624 EKAVALINAM--------AYAPFHITERQW----TELFESNEDRISRDKLEKLLNALCNC 671
+I A+ A+A F ++ T L+ S D ++R+ LE L L
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT 539
Query: 672 NAASSEITVSNLSRALHALCRSEKERD 698
+ + + + L LC++ K D
Sbjct: 540 SLCKPDFVMHKM--VLDGLCKAGKAED 564
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 181/447 (40%), Gaps = 66/447 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL +A + +++ + ++ S Y+ LL L KAGR EA R++ M+
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVIS---YSTLLDGLCKAGRLDEACRLWEEMV 206
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK------------------- 296
E + PD+ AY S L + + E +M K SK
Sbjct: 207 EK-SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHA 265
Query: 297 ------RIKNMHR--------KNWDPVLE----PDLVVYNAVLNACVPSHQW-KGV--FW 335
I+++ R K ++ ++ P ++N +++A S + GV F
Sbjct: 266 EEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQ 325
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
K +++ P+ TY + ++ + ++ + D E +MA G + +TY LV
Sbjct: 326 RMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLC 385
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ GK++ A + M + GV + + L G+ A+ +E +K+ R S P
Sbjct: 386 KLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA-RGSTPDL 444
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+ L+ G ID+ I+ M C P++ + ++ R+ + A +F+E
Sbjct: 445 VTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQE 504
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ + PD Y S+L+ A + + K S C+ D
Sbjct: 505 MVKRG-------------VLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFVM 548
Query: 575 HAWLLVEASRAGK----CHLLEHAFDS 597
H +L +AGK C ++E D+
Sbjct: 549 HKMVLDGLCKAGKAEDACEVVERMADA 575
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 160/416 (38%), Gaps = 52/416 (12%)
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R+ G + S TY ++ + ++ L +E F++M + G TY +++R + G++
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
++A + + + GV Y + C R DA+ + + + S P +TF
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L+ G + + +F++M K CEPN+ + + +L + +A L+EE +
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
PD Y+S + A++ + M G + D + ++
Sbjct: 210 CV-------------PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256
Query: 580 VEASRAGKC-----HLLEH------------AFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ G ++EH F+ ++ P F LI A+ +S
Sbjct: 257 GILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNT-LIHAVCKSK 315
Query: 623 -YEKAVALINAMA-----YAPFHITERQWTELFESNEDRISR----DKLEKLLNALCNCN 672
V L M Y P ++ E + D + + D+ ++L+N + N
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNL------ETYNIMVDNLCKAKQLDEAQELVNEMANYG 369
Query: 673 AASSEITVSNLSRALHALCRSEKERDL----SSSAHFGSQAIDISPLHGIHEAFDV 724
+ +T S L L L + ++ DL S F D S L+ + +A V
Sbjct: 370 LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 118/557 (21%), Positives = 219/557 (39%), Gaps = 67/557 (12%)
Query: 195 KLLKGLGDKGSWRQAMSVL-DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+LLKGL D R+AM +L + L D+ S Y LL R EAL + ++
Sbjct: 134 QLLKGLCDAKRLREAMDILIKRMPELGCTPDVVS---YNTLLKGFCNEKRAEEALELLHM 190
Query: 254 MLE----DCNLYPDIAAYHSVA---VTLGQV-------------GLLKELVKLIERM--- 290
M + C P++ +Y +V T GQV G+ +V +
Sbjct: 191 MADSQGRSCP--PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGL 248
Query: 291 -RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + R + + ++ D ++PD YN +++ + +WK V + +++ GLKP
Sbjct: 249 CKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDC 308
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TYG + + +G+ FF M + G Y +L+ + +G ++E +
Sbjct: 309 YTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNL 368
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + G+ ++ + +AM + K+K + P + F LI + G
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQ-QGLSPDVVNFGALIDALCKLG 427
Query: 470 HIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL-FEETTRANSSGYTF-- 525
+DD + F Q M + PNI N+++ D + KAKE FE + F
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487
Query: 526 -----LSGDGAPLK--------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
L G +K PD +Y++++ + + M
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
G + D+ + LL RAG+ F +L G P + ++ +L + +A
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 627 VALINAMAYAPFHITERQWTE-LFESNEDRISR----DKLEKLLNALCNCNAASSEITVS 681
L Y + +QW ++ + +S+ D+ KL +LC + ++ ++
Sbjct: 608 KEL-----YLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLC---SKDFQLEIT 659
Query: 682 NLSRALHALCRSEKERD 698
+ + AL +S + D
Sbjct: 660 TFNIMIGALFKSGRNED 676
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/412 (19%), Positives = 154/412 (37%), Gaps = 38/412 (9%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ V +LL L A R EA+ I + + PD+ +Y+++ +E ++L
Sbjct: 128 NNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALEL 187
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M + P++V Y V+N Q + +F ++ G++
Sbjct: 188 LHMMADSQGRSCP------------PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQ 235
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ + ++ D F++M G TY L+ + GK E V
Sbjct: 236 PNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRM 295
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M G+ Y L LCNNGR ++A + + +R + G++I
Sbjct: 296 LEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSM--IRKGIKPNVAIYGILIHGY 353
Query: 467 -DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G + + + M ++ P+ N + Y++ M +A +F + + S
Sbjct: 354 ATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDV 413
Query: 525 FLSG------------DGAPLK----------PDEYTYSSMLEASATAHQWEYFEYVYKG 562
G D A LK P+ + ++S++ T +WE + Y
Sbjct: 414 VNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFE 473
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
M G + D +L G+ + D + G P + +T ++
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLI 525
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 113/275 (41%), Gaps = 19/275 (6%)
Query: 338 KQLRKSGLK--PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ +R+ +K P TY + + + G+ + F + KSG + + L++
Sbjct: 81 RMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLC 140
Query: 396 EEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL--RHSK 452
+ ++ EA+ ++ M + G Y L CN R ++A+ ++ + R
Sbjct: 141 DAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCP 200
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P +++ +I G +D ++F M D +PN+ T ++ + + +A+ +
Sbjct: 201 PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F++ +KPD TY+ ++ + +W+ + + M+ G + D
Sbjct: 261 FQQMIDKG-------------VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPD 307
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ LL G+C FDS++ G P+
Sbjct: 308 CYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPN 342
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 148/345 (42%), Gaps = 49/345 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVK 285
FV+ L+ L + +A + ML + PD+ ++++ L GQV + L+
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQ-GIRPDVVFFNTILCNLCTKGQVMKAQRLID 507
Query: 286 LIERMRQKPS--------------KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPS 327
L+ER+ +P RI K+ D +L +PD YN +L+ +
Sbjct: 508 LMERVGTRPDVISYTTLIGGHCLVGRIDEA-AKSLDVMLSVGLKPDEWTYNTLLHGYCRA 566
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + VF+++ ++G+ P TY + + + ++ E + M SG+ Y
Sbjct: 567 GRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIY 626
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+++ + ++EA +++ + + + + L +GR +DAM + I S
Sbjct: 627 NIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISS 686
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML-KVYSRNDMF 505
P T+ + + ++ G++++ +F M K PN +NA++ ++ R D+
Sbjct: 687 Y-GLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDI- 744
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
TRA + +LS K DE +S LEAS TA
Sbjct: 745 ----------TRAGA----YLS------KLDEKNFS--LEASTTA 767
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 161/452 (35%), Gaps = 87/452 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ G G W++ + +L+ + +GLK + Y LL L GR EA F+
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLK-----PDCYTYGSLLNYLCNNGRCREARFFFDS 333
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN---------- 300
M+ + P++A Y + G L E+ L+ M + P I N
Sbjct: 334 MIRK-GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392
Query: 301 -----MH--RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
MH K L PD+V + A+++A + F Q+ G+ P+ +
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + K++ EF+ +M G + + ++ +G++ +A + ME+
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G Y L C GR +A ++ + S+ KP E T+ L+ G IDD
Sbjct: 513 GTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV-GLKPDEWTYNTLLHGYCRAGRIDD 571
Query: 474 CISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL--------------------- 511
+F+ M ++ P + T + +L FS+AKEL
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631
Query: 512 ------------------------FEETTRANSSGYTFLSG------------DGAPLKP 535
E TT G F SG L P
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
D +TY + E E F+ ++ M SG
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 122/325 (37%), Gaps = 32/325 (9%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
R + ++ L + K + + +M + G L+ G G +A
Sbjct: 480 RPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAK 539
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
LD + + K D + Y LL +AGR +A +F ML + + P + Y ++
Sbjct: 540 SLDVMLSVGLKPD---EWTYNTLLHGYCRAGRIDDAYGVFREMLRN-GITPGVVTYSTIL 595
Query: 272 ---VTLGQVGLLKEL-VKLIERMRQ--------------------KPSKRIKNMHRKNWD 307
T + KEL + +I +Q + K +++ K++
Sbjct: 596 HGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDF- 654
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
+ ++ +N ++ A S + + +F + GL P TY L E +++ G +
Sbjct: 655 ---QLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
+ F M KSG + LVR G I A A + ++++ AS L
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLIS 771
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSK 452
L + A + EK + L +K
Sbjct: 772 LLSRDEYHHHATSLPEKYRVLNEAK 796
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 158/386 (40%), Gaps = 46/386 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ KAG EA+ FN M ED PD A+ V +L + E + +
Sbjct: 184 FTILVRRYVKAGLAAEAVHAFNRM-EDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSL 242
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + EPD+VVY ++++ + VF +++ +G++P+
Sbjct: 243 KDR----------------FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVY 286
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + ++ + +SG+ H+ F +M G A+T+ L+R + G+ + + M
Sbjct: 287 TYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQM 346
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK---SLRHSKPLEITFTGLIISSMD 467
++ G A Y L C + ++A+ ++ +K +L S +F +
Sbjct: 347 KRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNAS-----SFNPIFGCISK 401
Query: 468 GGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS---RNDMFSKAKELFEETTRANSSGY 523
G ++ +F MKD C PN T N ++++++ DM K ++ +E
Sbjct: 402 LGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENE------- 454
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC-QLDQTKHAWLLVEA 582
++P+ TY ++ W +K M C + + +L +
Sbjct: 455 ---------IEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQL 505
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPL 608
+AG+ E + ++ G + PL
Sbjct: 506 RKAGQLKKHEELVEKMVNRGFVTRPL 531
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 107/281 (38%), Gaps = 52/281 (18%)
Query: 356 MEVMLQSGK---YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
ME++ +GK +DL + M I T+ +LVR + + G EAV A ME
Sbjct: 150 MEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMED 209
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
G KP +I F+ +I S
Sbjct: 210 YG------------------------------------CKPDKIAFSVVISSLSKKRRAI 233
Query: 473 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ S F +KD EP++ +++ + R S+A+ +F E A
Sbjct: 234 EAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAG------------- 280
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
++P+ YTYS +++A + Q V+ M GC + L+ +AG+ +
Sbjct: 281 IQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVL 340
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ + G P + + ++ N E+AV ++N++
Sbjct: 341 QVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSV 381
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 106/248 (42%), Gaps = 29/248 (11%)
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
WQ +++ +K+ P+E TFT L+ + G + + F M+D+ C+P+ +
Sbjct: 166 WQ----LIDLMKTRNVEIPVE-TFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFS 220
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
++ S+ +A+ F+ +PD Y+S++ A
Sbjct: 221 VVISSLSKKRRAIEAQSFFDSLKDR--------------FEPDVVVYTSLVHGWCRAGNI 266
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
E V+ M ++G Q + ++ ++ R+G+ F +++ G P+ + F +
Sbjct: 267 SEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNL 326
Query: 614 LIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKLEKLLNAL-- 668
+ + EK + + N M P IT + L ES+ + ++ K+LN++
Sbjct: 327 MRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT---YNFLIESHCRDDNLEEAVKILNSVKK 383
Query: 669 -CNCNAAS 675
CN NA+S
Sbjct: 384 GCNLNASS 391
>gi|357165906|ref|XP_003580534.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Brachypodium distachyon]
Length = 775
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 173/416 (41%), Gaps = 30/416 (7%)
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV----FWVFKQLRKSGLK 346
R +P+ ++ D + PD + LNA V + G+ F+ FK+LR +G +
Sbjct: 154 RLQPATHSSDLLSLFDDALAHPDPATFPKTLNAVVSALATHGLLEPAFYCFKRLRDAGFR 213
Query: 347 P-SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
TY + V+L G E +M+ SG A+ TY++ V A G+I+ +
Sbjct: 214 GLETPTYNALLSVLLTRGLAFKAFEVLDEMSVSGCALDKGTYELAVPALARAGRIDASRK 273
Query: 406 AVRNMEQRGVVGTAS--VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
M QR VG AS VY + L +GR AM + ++ ++ H ++ T ++
Sbjct: 274 LFDEMRQRDGVGRASPGVYSVMVDVLAKSGRLDAAMGMYREMVAVGHRVSTSVS-TAMVE 332
Query: 464 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ G +D + +++ M + P+ G +++ +R+ A +LF + + SG
Sbjct: 333 GLVRAGKLDAGMELWEEMRRGGLRPSFGLYTMVVEANARSGRLDVAAKLFGDMEK---SG 389
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+ P TY+ ++E A+A Q + +Y MA +G + + LL
Sbjct: 390 FF----------PTPATYACLVEMHASAGQVDIAMRMYHSMANAGTRPGLSTFTALL--- 436
Query: 583 SRAGKCHLLEHAFDSLLE--AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 640
+ LL+ A LLE A P + +++L+ I + E A+ + M A
Sbjct: 437 TMLANKRLLDLAAKVLLEMKASGFPIEVTASDLLMIYIKDGSTELALRWLRFMGSAGIRT 496
Query: 641 TERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKE 696
+LFES D LL A I +++ L L R + E
Sbjct: 497 NNFIIRQLFESCMKMGLYDSARPLLETYVGAAAKVDMILYTSI---LAHLVRCQDE 549
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 21/263 (7%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
E L+ L R + K ++ + M+ SG +G + L G + +
Sbjct: 216 ETPTYNALLSVLLTRGLAFKAFEVLDEMSVSGCALDKGTYELAVPALARAGRIDASRKLF 275
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
D + +D S VY+ ++ +L K+GR A+ ++ M+ + ++ S A+
Sbjct: 276 DEMRQ-RDGVGRASPGVYSVMVDVLAKSGRLDAAMGMYREMVAVGH---RVSTSVSTAMV 331
Query: 274 LGQV--GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
G V G L ++L E MR+ L P +Y V+ A S +
Sbjct: 332 EGLVRAGKLDAGMELWEEMRRGG---------------LRPSFGLYTMVVEANARSGRLD 376
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+F + KSG P+ ATY +E+ +G+ D+ + MA +G G T+ L+
Sbjct: 377 VAAKLFGDMEKSGFFPTPATYACLVEMHASAGQVDIAMRMYHSMANAGTRPGLSTFTALL 436
Query: 392 RAFWEEGKINEAVAAVRNMEQRG 414
+ ++ A + M+ G
Sbjct: 437 TMLANKRLLDLAAKVLLEMKASG 459
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 182/458 (39%), Gaps = 41/458 (8%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
P R + LV + R + + + VR M G+ L+ G + G
Sbjct: 215 PADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRV 274
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIA 265
+A +LD +K+K S Y L+ + + +A R+ + L + +L+P +
Sbjct: 275 EEAFRMLD---KMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHP--S 329
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIKNMHRKNWDPVLE-- 311
A H++ L + + KE V+ +RM + S +K + + +L+
Sbjct: 330 ACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSF 389
Query: 312 ------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
P VY V+ + + + + GL S +Y + ++ +++G
Sbjct: 390 IKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAV 449
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
D E ++M G +T+ L+ + + G ++ A ++ + + G + + L
Sbjct: 450 DKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSL 509
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DH 484
LCN + DA + E++ +P T+ L+ + GH++ I + MK D
Sbjct: 510 IDGLCNTHQLDDAFVCFEEMAEW-GVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDG 568
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
P+ + NA++ + R KA+++F + R + PD YTY+S++
Sbjct: 569 VTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFG-------------VVPDSYTYNSLI 615
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+A + + + SGC + W +V A
Sbjct: 616 KALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAA 653
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 7/190 (3%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
VF Q+ + GL+PS A Y + +++G D + F++M G TY LV
Sbjct: 175 VFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVC 234
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G ++EAV VR ME G+ Y L CN GR ++A +++K+K + P E
Sbjct: 235 RRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKE-KGVAPSE 293
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI--GTVNAMLKVYSRNDMFSKAKELFE 513
T+ L+ D + H E ++ + ML S+ DM AKE E
Sbjct: 294 ATYRTLVHGVFRCLERDKAYRMLSDWLGH-ETSLHPSACHTMLYCLSKKDM---AKEAVE 349
Query: 514 ETTRANSSGY 523
R ++ GY
Sbjct: 350 FEKRMSARGY 359
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P VYNA++ A V + + F+Q+ G +P TY + + + G D
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAV 243
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
R+M G TY +LV F G++ EA + M+++GV + + Y L
Sbjct: 244 RLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTL 299
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 99/512 (19%), Positives = 188/512 (36%), Gaps = 71/512 (13%)
Query: 159 RVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV-- 216
R LV L R + + V + G +E + L++ G G R A V +
Sbjct: 122 RALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPR 181
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
GL+ S VY L+A +AG A F M D PD Y+S+ + +
Sbjct: 182 LGLR-----PSTAVYNALIAASVRAGAVDTAYLRFQQMPAD-GCRPDHFTYNSLVHGVCR 235
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G++ E V+L+ +M + + P++ Y +++ + + + F +
Sbjct: 236 RGIVDEAVRLVRQMEGEG---------------IRPNVFTYTMLVDGFCNAGRVEEAFRM 280
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
++++ G+ PS ATY + + + + D + ++ ++ +
Sbjct: 281 LDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSK 340
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACC---------LC-------NNGRWQDAML 440
+ EAV + M RG + ++ + + C LC NG +
Sbjct: 341 KDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDV 400
Query: 441 VVEKIKSLRHSKPLE--------ITFTGLIISSMDGGHIDDCI----------SIFQHMK 482
+ IKSL + K + GL+ S M + DC I + M+
Sbjct: 401 YIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQ 460
Query: 483 DHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
D PN+ T N ++ YS+ AK + + + F+ PD T++
Sbjct: 461 DKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLME-----HGFM--------PDIITFT 507
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
S+++ HQ + ++ MA G + + + L+ AG + + +
Sbjct: 508 SLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKID 567
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G P F +++ +KA + N M
Sbjct: 568 GVTPDAYSFNALILSFCRMRKVDKAEDIFNDM 599
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++DK L + + L++ K G H A + +++E PDI + S+ L
Sbjct: 459 MQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEH-GFMPDIITFTSLIDGLCNTH 517
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVF 337
L + E M + W + P+ YN +++ C H K + +
Sbjct: 518 QLDDAFVCFEEMAE-------------WG--VRPNAQTYNVLMHTLCSAGHVNKAID-LL 561
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+++ G+ P A ++ + + K D + F M + G + TY L++A +E
Sbjct: 562 NKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDE 621
Query: 398 GKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
++N+A + E+ G Y+ + L G++ +A +++K S
Sbjct: 622 RRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKYLS 672
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 52/329 (15%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKRIKNMHR 303
A IF ML L PD A Y+ + ++G + + ++E+M R +PS R
Sbjct: 471 AFAIFEEMLRS-GLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA----- 524
Query: 304 KNWDPVLE------------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ P++E P ++ YNA+++ V H+ + V +
Sbjct: 525 --FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDK 582
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ +G+ P+ TY + M SG E+F K+ +SG + Y+ L+RA + G+
Sbjct: 583 MSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 642
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TF 458
+ A+A R M + + +Y L G +A +++++K P I T+
Sbjct: 643 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKE--DGVPPNIHTY 700
Query: 459 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
T I + G + + + M D +PN+ T ++K ++R + +A + FEE
Sbjct: 701 TSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKL 760
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
A LKPDE +Y ++ +
Sbjct: 761 AG-------------LKPDEASYHCLVTS 776
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 22/306 (7%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VY+++++ VF++L++ G KPS +YG + + ++ GK ++M
Sbjct: 384 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM 443
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G TY +L+ F A A M + G+ ++Y L C G
Sbjct: 444 ESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNM 503
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ ++EK++ R +P F +I G + + M + C P + T NA
Sbjct: 504 DRAICILEKMQKERM-QPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNA 562
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-SATAHQW 553
++ R +A + ++ + A + P+E+TY+ ++ +A+
Sbjct: 563 LIHGLVRKHKVQRAVSVLDKMSIAG-------------ITPNEHTYTIIMRGYAASGDIG 609
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG--EIPHPLFFT 611
+ FEY K + SG +LD + LL ++G+ ++ A E +IP F
Sbjct: 610 KAFEYFTK-IKESGLKLDVYIYETLLRACCKSGR---MQSALAVTREMSFQKIPRNTFIY 665
Query: 612 EMLIQA 617
+LI
Sbjct: 666 NILIDG 671
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 158/411 (38%), Gaps = 49/411 (11%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L++C P I +Y + ++G + + + + + M S IK+ ++
Sbjct: 408 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEME---SCGIKHNNK----------- 453
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y+ ++N + H + F +F+++ +SGL+P A Y L +E + G D K
Sbjct: 454 -TYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 512
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K ++ ++ + G + A+ + M + G V T Y L L +
Sbjct: 513 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHK 572
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
Q A+ V++K+ S+ P E T+T ++ G I F +K+ + ++
Sbjct: 573 VQRAVSVLDKM-SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYE 631
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG------------------------D 529
+L+ ++ A + E + TF+ D
Sbjct: 632 TLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED 691
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
G P P+ +TY+S + A A + E V + M G + + + L+ +R
Sbjct: 692 GVP--PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPD 749
Query: 590 LLEHAFDSLLEAG----EIPHPLFFTEMLIQAIVQ--SNYEKAVALINAMA 634
F+ + AG E + T +L +A V S Y +++ M+
Sbjct: 750 RALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMS 800
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/338 (17%), Positives = 137/338 (40%), Gaps = 15/338 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+EP+ V+ ++++A + +G ++++ GL+ + TY + + +
Sbjct: 273 IEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSAD 332
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F++ ++ + Y ++ A + G + A VR ME+ G+ VY+ +
Sbjct: 333 NLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGY 392
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
++V E++K KP I++ L+ + G + +SI + M+ + N
Sbjct: 393 TIIQNENKCLVVFERLKECGF-KPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHN 451
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T + ++ + F+ A +FEE R+ L+PD Y+ ++EA
Sbjct: 452 NKTYSMLINGFIHLHDFANAFAIFEEMLRSG-------------LQPDRAIYNLLIEAFC 498
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + + M Q ++ + AG D + +G +P +
Sbjct: 499 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVM 558
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
+ ++ + + ++AV++++ M+ A E +T
Sbjct: 559 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYT 596
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 176/433 (40%), Gaps = 95/433 (21%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G R A +L + L DK + + +Y ++ L + R +A ++ M + N+YPD
Sbjct: 249 GRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAM-DKINVYPD 307
Query: 264 IAAYHSVAVTLGQVGL-LKELVKLIERMRQKPSKRIKN---------------------- 300
+ TL + G KE+ ++ E+M +K K ++
Sbjct: 308 NVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQ 367
Query: 301 --MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
M +K + + +VYN +++A S+ + V +F ++R GLKPSAATY + M+
Sbjct: 368 TEMEKKG----IRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDA 423
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA-AVRNMEQRGVVG 417
+ + D+V R+M G +Y L+ A+ K+++ A A M++ G+
Sbjct: 424 YARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKP 483
Query: 418 TASVYYELACC----------------LCNNG----------------RWQDA------- 438
++ Y L +C G R D
Sbjct: 484 SSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIW 543
Query: 439 -MLVVEKIKSLRHSKPLEITFTGLIIS-SMDGGHID--DCISIFQHMKDHCEPNIGTVNA 494
+++ EKIK R IT+ L+ + G +I+ D +S F M +P++ T N
Sbjct: 544 KLMLREKIKGTR------ITYNTLLDGFAKQGLYIEARDVVSEFSKM--GLQPSVMTYNM 595
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ Y+R +K +L +E N LKPD TYS+M+ A ++
Sbjct: 596 LMNAYARGGQDAKLPQLLKEMAALN-------------LKPDSITYSTMIYAFVRVRDFK 642
Query: 555 YFEYVYKGMALSG 567
+ +K M SG
Sbjct: 643 RAFFYHKMMVKSG 655
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/382 (18%), Positives = 152/382 (39%), Gaps = 18/382 (4%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY-DLVHEF 371
D+ +YNA ++ S ++ + V++ + K + P T + + + ++G+ V E
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F KM++ G + LV++F +EG EA+ ME++G+ VY L
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 490
+ ++ + +++ + KP T+ L+ + D ++ + M+D EPN+
Sbjct: 392 SNHIEEVEGLFTEMRD-KGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ ++ Y R S + + FL LKP ++Y++++ A + +
Sbjct: 451 SYTCLISAYGRTKKMS------------DMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
E ++ M G + + +L R+G L + +L + +
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY 558
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 670
+L Q Y +A +++ + + + L + KL +LL +
Sbjct: 559 NTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAA 618
Query: 671 CNAASSEITVSNLSRALHALCR 692
N IT S + ++A R
Sbjct: 619 LNLKPDSITYSTM---IYAFVR 637
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 81/210 (38%), Gaps = 22/210 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVKLI 287
YT L+ +G +A F M ++ + P + Y SV G G L E+ KL+
Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMCKE-GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
R + K ++ + YN +L+ + V + K GL+P
Sbjct: 547 LREKIKGTR------------------ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
S TY + M + G+ + + ++MA ++TY ++ AF A
Sbjct: 589 SVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYH 648
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+ M + G V Y +L L + + ++
Sbjct: 649 KMMVKSGQVPDPRSYEKLRAILEDKAKTKN 678
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 107/503 (21%), Positives = 200/503 (39%), Gaps = 56/503 (11%)
Query: 109 KRENLRELKEMFE-----------KDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEA 157
K +N+ E ++F+ KD +L V+L A ++ H EA+
Sbjct: 53 KVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADT 112
Query: 158 I--RVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
I ++++ L ++ A + + M + GL T + L+ GL +G+ QA+ ++D
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDH 172
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ ++ D+ + Y L+ L K G A+ M E+ N P++ Y ++ L
Sbjct: 173 MEKMRYPLDV---YTYGVLINGLCKTGDTLAAVEWLRKM-EERNWKPNVVVYSTIMDGLC 228
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
+ GL+ E + L M K + P+LV Y ++ +WK
Sbjct: 229 KDGLVSEALNLCSEMSGKGVR---------------PNLVTYACLIQGLCNFGRWKETGS 273
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ ++ K G++ T + ++ + GK M +GE TY L+ +
Sbjct: 274 LLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYC 333
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ K+NEA+ M RG + V+ L C + M ++E++ + P
Sbjct: 334 LQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFV-PDV 392
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+T LI G +F +M + + PN+ T +L + ++ S+A L E
Sbjct: 393 VTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEA 452
Query: 515 TTRAN----------------SSGY------TFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++N S+G F S G L+ + YTY+ M++
Sbjct: 453 MEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGS 512
Query: 553 WEYFEYVYKGMALSGCQLDQTKH 575
+ E + M +GC D +
Sbjct: 513 LDKAEDLLINMEENGCLPDNCTY 535
>gi|298705454|emb|CBJ28729.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 745
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 138/328 (42%), Gaps = 25/328 (7%)
Query: 160 VLVDRLSEREMTAKNWKFV-----RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
VLV R RE W+ V + ++GL+ T +++ L G W M L+
Sbjct: 412 VLVMRAFGRE---GRWRTVIDLMGSLKEEAGLVPTVSSYNVVIEALAKAGEW---MKALE 465
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ +K +R + F Y++ +A K+G L + M E +L PD + + V
Sbjct: 466 MLAEMKQERVRPTEFTYSRCMAACEKSGEWERTLLLLADMKEQEDLVPDSYIFSTAMVAC 525
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G L +++ +++ MR+ + P+LV+YN + +C + W +
Sbjct: 526 SKAGRLDDVLGILQEMREMSATS-------------GPNLVLYNIAIGSCARARDWPRML 572
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
++R+ ++P +T+ ++ ++G + E +M + G G +TY +V A
Sbjct: 573 EEMDRMRREDIEPEESTFAAPLDTCGRTGNLPMALELLDRMREDGIKPGVVTYGYVVAAA 632
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
G+ A + ME G Y +A C G DA + + + + ++ P
Sbjct: 633 CRAGERTSAALLLDEMEAAGHPPNERT-YGVAALACREGNNADAAIDLLRRRQMQGLPPD 691
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMK 482
+ + + + + G++ + + MK
Sbjct: 692 ALILSCAVQACSNAGNMQRGLELITEMK 719
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/471 (18%), Positives = 175/471 (37%), Gaps = 51/471 (10%)
Query: 175 WKFVRIMNQS-----GLMFTEGQMLKLLKGLGDKGSWRQAMSVLD--WVYGLKDKRDLKS 227
W + +++Q +M G M + G WR A+S+L+ GL+ +
Sbjct: 246 WGALALLDQDDGLPRSVMLRTGAM----QACSGAGEWRAALSILEDMQAEGLR-----PN 296
Query: 228 RFVYTKLLAILGKAGRPHEALRIFN--LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
Y + + G AL + + LM + AA+H G G +E
Sbjct: 297 GAAYVAAMEACARGGVMDLALELLDRVLMFHPRDERTVTAAFHGAIKACGNGGQWEEATS 356
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L++RMRQ + + YNA + AC + Q + +
Sbjct: 357 LLQRMRQDSLAVVTSRE--------------YNAAIMACCRAQQSVAALTLLGDMSVESE 402
Query: 346 KPSA--ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT-YKVLVRAFWEEGKINE 402
SA +Y L M + G++ V + + + + ++ Y V++ A + G+ +
Sbjct: 403 HCSADETSYVLVMRAFGREGRWRTVIDLMGSLKEEAGLVPTVSSYNVVIEALAKAGEWMK 462
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A+ + M+Q V T Y +G W+ +L++ +K P F+ +
Sbjct: 463 ALEMLAEMKQERVRPTEFTYSRCMAACEKSGEWERTLLLLADMKEQEDLVPDSYIFSTAM 522
Query: 463 ISSMDGGHIDDCISIFQHMKDHCE---PNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
++ G +DD + I Q M++ PN+ N + +R + + E + R +
Sbjct: 523 VACSKAGRLDDVLGILQEMREMSATSGPNLVLYNIAIGSCARARDWPRMLEEMDRMRRED 582
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++P+E T+++ L+ + M G + + +++
Sbjct: 583 -------------IEPEESTFAAPLDTCGRTGNLPMALELLDRMREDGIKPGVVTYGYVV 629
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
A RAG+ D + AG P+ + + +N + A+ L+
Sbjct: 630 AAACRAGERTSAALLLDEMEAAGHPPNERTYGVAALACREGNNADAAIDLL 680
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 128/279 (45%), Gaps = 14/279 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ +++ + L+P Y + ++ ++GK D+ + F +M +G + +TY ++
Sbjct: 257 LLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLC 316
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ ++NEAV +M+Q V A Y + G+++DA ++E+ + + P
Sbjct: 317 KADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRR-KGCIPSV 375
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+++ ++ G +D+ + F+ MK PN+ T N M+ DM KA +L ET
Sbjct: 376 VSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMI------DMLCKAGKL--ET 427
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
A L P+ T + M++ A + + +++G+ C+ D +
Sbjct: 428 ALVVRDAM-----KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTY 482
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
L+ R G+ ++ +L+A +IP+ + +T ++
Sbjct: 483 CSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 167/410 (40%), Gaps = 40/410 (9%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
GL K Y L+ LG+ GR EA +++ ML D N P+ Y S+ +
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML-DANQIPNAVVYTSLIRNFFKC 527
Query: 278 GLLKELVKLIERMRQKPSKRIKN-MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G R++ +I N M R PDL++ N ++ + + + +
Sbjct: 528 G------------RKEDGHKIYNEMLRLGC----SPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F++++ G P A +Y + + ++++G +E F M + G + Y ++ F +
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE- 455
GK+N+A + M+ +G T Y + L R +A ++ E+ K SK +E
Sbjct: 632 SGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK----SKGIEL 687
Query: 456 --ITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ ++ LI G ID+ I + M+ PN+ T N +L D KA+E+
Sbjct: 688 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL------DALVKAEEIS 741
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
E F S P+ TYS ++ ++ ++ M G + +
Sbjct: 742 EALV-------CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ ++ ++AG + F+ E G + + +I+ + +N
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA-IIEGLSNAN 843
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 140/337 (41%), Gaps = 26/337 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
LEPD+V+YN ++ + + + F +++ +GL TY + V+ ++ + +
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E F M ++ + A Y ++ + GK +A + + ++G + + Y + CL
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
G+ +A+ E++K + + P T+ +I G ++ + + MKD PN
Sbjct: 386 GRKGQVDEALKKFEEMK--KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGY-TFLSGDGAPLKPDEY--TYS 541
+ TVN M+ + A +FE +T R ++ Y + + G G + DE Y
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503
Query: 542 SMLEASATAHQWEYFEY---------------VYKGMALSGCQLDQTKHAWLLVEASRAG 586
ML+A+ + Y +Y M GC D + +AG
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
+ F + G IP +T +LI +V++ +
Sbjct: 564 EIEKGRALFQEIKNLGFIPDARSYT-ILIHGLVKAGF 599
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 129/296 (43%), Gaps = 20/296 (6%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ L KAG HEA +F M E C L D AY++V + G + + +L+E
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVL--DTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K EP +V Y +V++ + + +F++ + G++ +
Sbjct: 645 MKTKGH---------------EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNV 689
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ + G+ D + ++ + G T+ L+ A + +I+EA+ ++
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQS 749
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M+ Y L LC ++ A + ++++ + KP T+T +I G
Sbjct: 750 MKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK-QGFKPNVFTYTTMISGLAKAG 808
Query: 470 HIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+I + ++F+ K+ + NA+++ S + S A LFEE S YT
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYT 864
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 135/335 (40%), Gaps = 30/335 (8%)
Query: 141 KNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGL 200
KN+ + P+ R + +L+ L + + ++ M + G + ++ G
Sbjct: 576 KNLGFIPDAR------SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629
Query: 201 GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
G +A +L+ +K K + Y ++ L K R EA +F + +
Sbjct: 630 CKSGKVNKAYQLLEE---MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFE-EAKSKGI 685
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
++ Y S+ G+VG + E ++E + QK L P++ +N +
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG---------------LTPNVYTWNCL 730
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
L+A V + + F+ ++ P+ TY + + + + K++ F+++M K G
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
TY ++ + G I EA +++G V +++Y + L N R DA
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ E+ + S +T + +D H +CI
Sbjct: 851 LFEEARLKGCS-----IYTKTCVVLLDSLHKAECI 880
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 182/451 (40%), Gaps = 68/451 (15%)
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS--------- 295
+R+ L+D L +A +S+ + G +GL++EL+ + RM++ PS
Sbjct: 169 IRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVN 228
Query: 296 KRIKNMHRKNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ +M ++ + V E PD V YN ++ + + + F+ + +KP
Sbjct: 229 GLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKP 288
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY ++ +D + +M + G I +Y +++ ++ K EA A
Sbjct: 289 DKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVF 348
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M Q+G ++Y L NG ++AM + E++K+ +P +T++ L+
Sbjct: 349 ETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKN-EGFEPDAVTYSVLVNGLCK 407
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKV-----YSRNDMFSKAKELFEETTRANSSG 522
G +DD + +F D C +NAM + A+ LFEE + +
Sbjct: 408 SGRLDDGMELF----DFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCA- 462
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVE 581
D Y Y+++++A A + + ++ M GC DQT + + +L++
Sbjct: 463 ------------RDSYCYNAIIDALAKHGKIDQALALFGRMEEEGC--DQTVYTFTILID 508
Query: 582 ASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
K H E A D +++ G P F + I + +A +++ + AP
Sbjct: 509 G--LFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDL--APM 564
Query: 639 HITERQWTELFESNEDRISRDKLEKLLNALC 669
I I E ++N LC
Sbjct: 565 GI---------------IPETAFEDMINTLC 580
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/286 (17%), Positives = 116/286 (40%), Gaps = 20/286 (6%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++ L ++ + + MNQ G L+ GS +AM + + +
Sbjct: 330 LVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFER---M 386
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K++ Y+ L+ L K+GR + + +F+ + + + Y S+ LG+ G
Sbjct: 387 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDF-CRNKGVAINAMFYASLIDGLGKAGR 445
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+++ L E M +K R D YNA+++A + +F +
Sbjct: 446 IEDAENLFEEMSEKGCAR---------------DSYCYNAIIDALAKHGKIDQALALFGR 490
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + G + T+ + ++ + + K + +F+ KM G +++ L GK
Sbjct: 491 MEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGK 550
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+ A + ++ G++ + + ++ LC R ++A + + I
Sbjct: 551 VARACKILDDLAPMGII-PETAFEDMINTLCKAQRIKEACKLADGI 595
>gi|115456295|ref|NP_001051748.1| Os03g0824100 [Oryza sativa Japonica Group]
gi|113550219|dbj|BAF13662.1| Os03g0824100, partial [Oryza sativa Japonica Group]
Length = 691
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 137/343 (39%), Gaps = 36/343 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR +F M + PD A Y+ + G G KE+V+L +
Sbjct: 181 TYRVLLDLYGRQGRFDGVRELFREM--RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQD 238
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +H + +EPD+ V+ AC + V + G+ P+A
Sbjct: 239 M----------LHSE-----VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTA 283
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E + + Y+ + F M + G TY L AF + G EA A
Sbjct: 284 KAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSR 343
Query: 410 MEQRGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M + ++ L C + DA+ +++ R + P E + G++ +
Sbjct: 344 MTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFN-PDERSLEGVLNAYCIA 402
Query: 469 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTF 525
G ID+ F+ ++ P+I ML +Y+RND ++ A +L EE T RA+S+
Sbjct: 403 GVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVI 462
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
A + EY S W+ EYV L GC
Sbjct: 463 -----ASMIKGEYDDDS---------NWQMVEYVLDNSNLEGC 491
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 152/391 (38%), Gaps = 49/391 (12%)
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
L+ L MR PS P + PDL YN +L A + + + +
Sbjct: 55 LLGLFAEMRHDPS------------PSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLE 102
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
+G+ P A+Y ++ +G V E F +M+ +G Y L+ A G E
Sbjct: 103 AGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAE 162
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGL 461
AVA +R M+ G TA+ Y L GR+ V E + +R + P + T+ L
Sbjct: 163 AVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDG---VRELFREMRTTVPPDTATYNVL 219
Query: 462 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
DGG + + +FQ M EP+I T ++ R + A+E+ +
Sbjct: 220 FRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLD------- 272
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
+++ +G + P Y+ ++EA A +E + M G + L
Sbjct: 273 ----YITTEG--MVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNAL-- 324
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 640
A+ K L + A EA F+ M A +Q + + ALI AY
Sbjct: 325 -ANAFAKGGLFQEA-----EA-------IFSRMTNNAAIQKDKDSFDALIE--AYCQGAQ 369
Query: 641 TERQWTELFESNEDRISRDK--LEKLLNALC 669
+ E + R + D+ LE +LNA C
Sbjct: 370 LDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 400
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 134/325 (41%), Gaps = 17/325 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD+ YN +++ + + + K GL P+ +Y + V + GK +
Sbjct: 342 EPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFD 401
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F M + G + + Y LV G+++ A+ M +RGV+ A+VY L LC
Sbjct: 402 LFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLC 461
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS-MDGGHIDDCISIFQ-HMKDHCEPN 488
GR A L++ ++ L + L+ + ++ + G +D+ +F+ + +P
Sbjct: 462 KKGRLSAAKLLL--VEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPG 519
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ NAM+K Y + M + A + + S PDE+TYS++++
Sbjct: 520 VVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHS-------------PDEFTYSTIIDGYV 566
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ ++ M C+ + + L+ R G E F+ + +G P+ +
Sbjct: 567 KQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVV 626
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM 633
+T ++ + KA + M
Sbjct: 627 TYTILIGCFCKEGKISKACSFFELM 651
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 127/324 (39%), Gaps = 75/324 (23%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI Y+++ + G + E +L+E ++ L P+ + Y ++
Sbjct: 343 PDITTYNTLISGSCRDGKVHEAEELLEHAIKRG---------------LSPNKLSYTPLI 387
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + F +F + + G YG + ++ +G+ D+ KM + G
Sbjct: 388 HVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVL 447
Query: 382 IGALTYKV-----------------------------------LVRAFWEEGKINEA--- 403
A Y V LV F GK++EA
Sbjct: 448 PDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKL 507
Query: 404 --VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+ + M+ GVVG Y + C G DA+ V+++K HS P E T++ +
Sbjct: 508 FELTIAKGMDP-GVVG----YNAMIKGYCKFGMMNDALTCVQRMKDGDHS-PDEFTYSTI 561
Query: 462 IISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
I + + + + +F Q +K C+PN+ T +++ + R S+A++ FEE S
Sbjct: 562 IDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEM---RS 618
Query: 521 SGYTFLSGDGAPLKPDEYTYSSML 544
SG LKP+ TY+ ++
Sbjct: 619 SG----------LKPNVVTYTILI 632
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 107/268 (39%), Gaps = 23/268 (8%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---------- 290
+G + AL ++++ + N PD+ A +++ L Q ++ K+ E M
Sbjct: 147 SGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNY 206
Query: 291 ----------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+++ + + + W P++V YN +++ + +FK+L
Sbjct: 207 SVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKEL 266
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ G P+ TYG+ + + + + V +M + G + Y +V A + G
Sbjct: 267 KMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCK 326
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE-KIKSLRHSKPLEITFT 459
E +R + + G + Y L C +G+ +A ++E IK R P ++++T
Sbjct: 327 IEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIK--RGLSPNKLSYT 384
Query: 460 GLIISSMDGGHIDDCISIFQHMKDHCEP 487
LI G +F M + P
Sbjct: 385 PLIHVYCKQGKCLRAFDLFIGMTEKGHP 412
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 97/269 (36%), Gaps = 24/269 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A++V D + ++ L VY L+ L K GR A + ML
Sbjct: 421 LVHGLVAAGEVDVALTVRD---KMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEML 477
Query: 256 EDCNLYPDIAAYHSVAVTLGQV--GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
NL D A+ S + G + G L E KL E K ++P
Sbjct: 478 HQ-NLSLD--AFVSATLVDGFIRHGKLDEAKKLFELTIAKG---------------MDPG 519
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+V YNA++ ++++ P TY ++ ++ + F
Sbjct: 520 VVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFG 579
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M K +TY L+ F G + A M G+ Y L C C G
Sbjct: 580 QMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEG 639
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
+ A E + L P ++TF LI
Sbjct: 640 KISKACSFFE-LMLLNRCIPNDVTFNYLI 667
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 8/238 (3%)
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
++ + K + K + P E ++ N + C +K V + ++++ G+ +
Sbjct: 257 ERANGLFKELKMKGFLPTTETYGIMINGLCKKC----NFKAVDGLLVEMKERGVDVNVQV 312
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y ++ ++ G V + R + ++G TY L+ +GK++EA + +
Sbjct: 313 YNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAI 372
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGH 470
+RG+ Y L C G+ A + + H PL++ G ++ + G
Sbjct: 373 KRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGH--PLDLVAYGALVHGLVAAGE 430
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
+D +++ M + P+ N ++ + S AK L E N S F+S
Sbjct: 431 VDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVS 488
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 132/303 (43%), Gaps = 15/303 (4%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+ +Y AV+NA + + V + +G++P+ TYG+ + + G+ +
Sbjct: 281 DVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLL 340
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
M G + + + ++ + +G +++A+ ME+ GV Y LAC LC
Sbjct: 341 ADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRV 400
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
R +A ++ + + P +T+T LI G + + +F+ M + P++ T
Sbjct: 401 NRLDEAKTLLHIMIEM-GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVT 459
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N M+ Y++ +A+ +E + G+ PD YTY+S++
Sbjct: 460 YNVMIDGYTKKGSIREAERFRKEMEK---KGFV----------PDVYTYASLVHGHCVNG 506
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ + +++ M G + + + L+ ++ G+ +D +L+AG IP ++
Sbjct: 507 KVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYS 566
Query: 612 EML 614
++
Sbjct: 567 ALV 569
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+E D+ YN + ++ + + + G+ P+ TY + + + G
Sbjct: 383 VELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEAR 442
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
FR+MA+ G +TY V++ + ++G I EA + ME++G V Y L
Sbjct: 443 RLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGH 502
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
C NG+ A+ + E++K R ++P + +T LI
Sbjct: 503 CVNGKVDVALKLFEEMKQ-RGTEPNVVAYTALI 534
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L L + R EA + ++M+E + P+ Y ++ + G + E +L
Sbjct: 388 YTYNTLACGLCRVNRLDEAKTLLHIMIE-MGVVPNYVTYTTLISIHCKDGDMVEARRLFR 446
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K + P +V YN +++ + K++ K G P
Sbjct: 447 EMAEKGAT---------------PSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPD 491
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + +GK D+ + F +M + G + Y L+ +EG+ A
Sbjct: 492 VYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYD 551
Query: 409 NMEQRGVVGTASVYYELACCLCNNGR 434
+M + G++ S+Y L L + R
Sbjct: 552 DMLKAGLIPDDSLYSALVGSLHTDNR 577
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 168/417 (40%), Gaps = 65/417 (15%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE---DCNLYP 262
+ + +S + + G + D + + L LG+ G+ A+ IFN M E +C YP
Sbjct: 283 YSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGK---AIDIFNSMKEKRSEC--YP 337
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ + ++ G ++ M + L+P++V YNA++
Sbjct: 338 DVVTFTTIIHLYSVCGQIENCQTAFNTMLAEG---------------LKPNIVSYNALIG 382
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
A K F VF +++K+G P +Y + +SGK + + F M ++
Sbjct: 383 AYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLV 441
++Y L+ A+ +G + EAV + ME+ GV S+ LA C GR +
Sbjct: 443 NLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAAC----GRCGQKV-- 496
Query: 442 VEKIKS------LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
KIKS LR K + I S + G D +S+++ M+ +P+ T N
Sbjct: 497 --KIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNV 554
Query: 495 MLKVYSRNDMFSKA---------------KELFEETTRANS---------SGYTFLSGDG 530
++ + + +A KE++ A S S +T + G
Sbjct: 555 LISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVG 614
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+PD TY++M+ A A WE ++ M Q D + L+ ++ G+
Sbjct: 615 C--RPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQ 669
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/529 (17%), Positives = 206/529 (38%), Gaps = 77/529 (14%)
Query: 149 KRWRSEAEAIRVL----VDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDK 203
K +R EA R V + ER + +W V ++N+ F+ L++ +
Sbjct: 80 KHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIREITQI 139
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
GS ++ V W +K++++ +R +Y ++ + + +A +F ++ P
Sbjct: 140 GSLEHSVQVFRW---MKNQKNYCARNDIYNMMIRLHARHNIVDQARGLF-FEMQKWRCKP 195
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D Y+++ G+ G + + +++ M + + P YN ++N
Sbjct: 196 DAETYNALINAHGRAGQWRWAMNIMDDMLRA---------------AIPPSRSTYNNLIN 240
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR--------- 373
AC S WK V K++ ++G+ P T+ + + + +Y V +F
Sbjct: 241 ACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRP 300
Query: 374 -------------KMAKSGEAI---------------GALTYKVLVRAFWEEGKINEAVA 405
K+ ++G+AI +T+ ++ + G+I
Sbjct: 301 DTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQT 360
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
A M G+ Y L ++G ++A V +IK P +++T L+ +
Sbjct: 361 AFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKK-NGFHPDVVSYTSLLNAY 419
Query: 466 MDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G + + +F+ M ++HC+PN+ + NA++ Y + ++A E+ E R
Sbjct: 420 GKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNG----- 474
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
++P+ + ++L A Q + V L G +L+ T + +
Sbjct: 475 --------VQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLS 526
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G+ + ++ P P+ + ++ S Y +A+ ++ M
Sbjct: 527 VGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEM 575
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 63/132 (47%)
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++AC +W+ + + K + S S + + +SGK + + + F K+ SG
Sbjct: 695 MVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASG 754
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
I TY +L++ G + + ++ ME+ G+ + +Y ++ N + A
Sbjct: 755 AEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQNRSGAEYAA 814
Query: 440 LVVEKIKSLRHS 451
++ E+I+SL+ +
Sbjct: 815 VIQERIESLKRN 826
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 168/417 (40%), Gaps = 65/417 (15%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE---DCNLYP 262
+ + +S + + G + D + + L LG+ G+ A+ IFN M E +C YP
Sbjct: 283 YSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGK---AIDIFNSMKEKRSEC--YP 337
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ + ++ G ++ M + L+P++V YNA++
Sbjct: 338 DVVTFTTIIHLYSVCGQIENCQTAFNTMLAEG---------------LKPNIVSYNALIG 382
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
A K F VF +++K+G P +Y + +SGK + + F M ++
Sbjct: 383 AYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLV 441
++Y L+ A+ +G + EAV + ME+ GV S+ LA C GR +
Sbjct: 443 NLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAAC----GRCGQKV-- 496
Query: 442 VEKIKS------LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
KIKS LR K + I S + G D +S+++ M+ +P+ T N
Sbjct: 497 --KIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNV 554
Query: 495 MLKVYSRNDMFSKA---------------KELFEETTRANS---------SGYTFLSGDG 530
++ + + +A KE++ A S S +T + G
Sbjct: 555 LISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVG 614
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+PD TY++M+ A A WE ++ M Q D + L+ ++ G+
Sbjct: 615 C--RPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQ 669
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/529 (17%), Positives = 206/529 (38%), Gaps = 77/529 (14%)
Query: 149 KRWRSEAEAIRVL----VDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDK 203
K +R EA R V + ER + +W V ++N+ F+ L++ +
Sbjct: 80 KHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIREITQI 139
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
GS ++ V W +K++++ +R +Y ++ + + +A +F ++ P
Sbjct: 140 GSLEHSVQVFRW---MKNQKNYCARNDIYNMMIRLHARHNIVDQARGLF-FEMQKWRCKP 195
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D Y+++ G+ G + + +++ M + + P YN ++N
Sbjct: 196 DAETYNALINAHGRAGQWRWAMNIMDDMLRA---------------AIPPSRSTYNNLIN 240
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR--------- 373
AC S WK V K++ ++G+ P T+ + + + +Y V +F
Sbjct: 241 ACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRP 300
Query: 374 -------------KMAKSGEAI---------------GALTYKVLVRAFWEEGKINEAVA 405
K+ ++G+AI +T+ ++ + G+I
Sbjct: 301 DTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQT 360
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
A M G+ Y L ++G ++A V +IK P +++T L+ +
Sbjct: 361 AFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKK-NGFHPDVVSYTSLLNAY 419
Query: 466 MDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G + + +F+ M ++HC+PN+ + NA++ Y + ++A E+ E R
Sbjct: 420 GKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNG----- 474
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
++P+ + ++L A Q + V L G +L+ T + +
Sbjct: 475 --------VQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLS 526
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G+ + ++ P P+ + ++ S Y +A+ ++ M
Sbjct: 527 VGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEM 575
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 91/217 (41%), Gaps = 16/217 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT ++ A +A +F L +E ++ PD A S+ + G +++ L E
Sbjct: 620 ITYTAMIHAYDVAENWEKASALF-LEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAE 678
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR+K + + + +++AC +W+ + + K + S S
Sbjct: 679 FMREKK---------------IPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVS 723
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+ + +SGK + + + F K+ SG I TY +L++ G + + ++
Sbjct: 724 IGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQ 783
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
ME+ G+ + +Y ++ N + A ++ E+I
Sbjct: 784 WMEEAGLQPSVGMYRSISSFAQNRSGAEYAAVIQERI 820
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 148/357 (41%), Gaps = 39/357 (10%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
+ L+ + R +A+ + + M E+ PD+ Y+++ ++GL+ + V+L +RM
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKM-EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME 201
Query: 292 QK-----------------PSKRIKNMHRKNWDPVLE---PDLVVYNAVLNACVPSHQWK 331
+ S R + R D V+ P+++ + AV++ V ++
Sbjct: 202 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+++++ + + P TY + + G+ D + M G +TY L+
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
F + +++E R M QRG+VG Y + GR A + ++ S +
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNI 381
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
+ I GL ++ ++ + +F++M K E +I T N ++ + A +
Sbjct: 382 RTYSILLYGLCMN----WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
LF LS G LKPD +Y++M+ QW+ + +Y+ M G
Sbjct: 438 LFRS-----------LSCKG--LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 130/322 (40%), Gaps = 18/322 (5%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
DL YN V+N ++ V ++ K G +P T + Q + +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
KM + G + Y ++ + G +N+AV ME+ GV A Y L LC +
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGT 491
GRW DA ++ + +R P ITFT +I + G + + +++ M C +P++ T
Sbjct: 223 GRWSDAARLMRDM-VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N+++ + +AK++ + PD TY++++ +
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGC-------------LPDVVTYNTLINGFCKSK 328
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ + +++ MA G D + ++ +AG+ + F + P+ ++
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYS 385
Query: 612 EMLIQAIVQSNYEKAVALINAM 633
+L + EKA+ L M
Sbjct: 386 ILLYGLCMNWRVEKALVLFENM 407
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/422 (19%), Positives = 168/422 (39%), Gaps = 37/422 (8%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+D + R L S ++K+L+ + K+ + +F+ M E C + D+ +Y+ V
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVIN 112
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L + + ++ +M + EPD+V ++++N ++
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFG---------------YEPDVVTVSSLINGFCQGNRVFD 157
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+ ++ + G +P Y ++ + G + E F +M + G A+TY LV
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
G+ ++A +R+M R +V + + G++ +AM + E++ + R
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM-TRRCVD 276
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P T+ LI G +D+ + M C P++ T N ++ + ++ + +L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 512 FEETTRANSSG-----YTFLSG---DGAP-----------LKPDEYTYSSMLEASATAHQ 552
F E + G T + G G P +P+ TYS +L +
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWR 396
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
E +++ M S +LD T + ++ + G F SL G P + +T
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Query: 613 ML 614
M+
Sbjct: 457 MI 458
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 89/221 (40%), Gaps = 22/221 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G +A +LD + K L Y L+ K+ R E ++F M
Sbjct: 285 LINGLCMHGRVDEAKQMLDL---MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L D Y+++ Q G ++ RM +P+ R
Sbjct: 342 QR-GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR------------------ 382
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ +L + + + +F+ ++KS ++ TY + + M + G + + FR +
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ G ++Y ++ F + + +++ R M++ G++
Sbjct: 443 SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
>gi|356495758|ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 554
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 147/336 (43%), Gaps = 34/336 (10%)
Query: 196 LLKGLGDKGSWRQAMS---VLDWVYG-------------LKDKRDLKSRFVYTKLLAILG 239
+LK + G WR + LD+ G +K K + FVY+K++ I
Sbjct: 173 VLKEMDYSGIWRSKETYQIFLDYYVGAGRLEDTWSTINVMKQKGFPLNSFVYSKVVGIYR 232
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
G +A+ + + E + D +S+ T G+ G L E +KL ++M+++
Sbjct: 233 DNGMWKKAIEVLEEIRER-GISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEG----- 286
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ P++V +N+++ + F +F +++ GL P + + M
Sbjct: 287 ----------VRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQEQGLYPDPKIFVTIISCM 336
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ GK+ ++ ++F M G Y VLV + + GK A V+ ++ GV+ +
Sbjct: 337 GEQGKWGIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNARECVQALKSEGVLVSP 396
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
S++ LA G + ++V++ I +P + LI + + G + +S++
Sbjct: 397 SIFCVLANAYAQQGLCEQVIMVLQ-IMEAEGIEPNIVMLNMLINAFGNAGRYMEAMSVYH 455
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
H+K+ P++ T ++K + R F + +++E
Sbjct: 456 HIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKE 491
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
WRS+ E ++ +D W + +M Q G K++ D G W++A+
Sbjct: 183 WRSK-ETYQIFLDYYVGAGRLEDTWSTINVMKQKGFPLNSFVYSKVVGIYRDNGMWKKAI 241
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
VL+ + +++ + ++ GK G EAL++F M ++ + P+I ++S+
Sbjct: 242 EVLEEI---RERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKE-GVRPNIVTWNSL 297
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ G + L M+++ L PD ++ +++ +W
Sbjct: 298 IKWHCKEGDFMKSFHLFTDMQEQG---------------LYPDPKIFVTIISCMGEQGKW 342
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ F+ ++ G K A Y + +++ Q GK+ E + + G + + VL
Sbjct: 343 GIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNARECVQALKSEGVLVSPSIFCVL 402
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
A+ ++G + + ++ ME G+ + L N GR+ +AM V IK
Sbjct: 403 ANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAMSVYHHIKESGV 462
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
S P +T+T L+ + + D+ I++ M+ D C P+
Sbjct: 463 S-PDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDRCTPD 500
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 125/300 (41%), Gaps = 17/300 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+FK++ G KP Y + L+ G L + ++M SG TY++ + +
Sbjct: 138 LFKEMICDGYKPKLNFYTSLLRGFLKKGLLGLANGVLKEMDYSGIWRSKETYQIFLDYYV 197
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G++ + + + M+Q+G + VY ++ +NG W+ A+ V+E+I+ L+
Sbjct: 198 GAGRLEDTWSTINVMKQKGFPLNSFVYSKVVGIYRDNGMWKKAIEVLEEIR--ERGISLD 255
Query: 456 ITFTGLIISSMDG-GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
II + G +D+ + +F+ M K+ PNI T N+++K + + F K+ LF
Sbjct: 256 THICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFT 315
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
+ L PD + +++ +W + ++ M + G +
Sbjct: 316 DMQEQG-------------LYPDPKIFVTIISCMGEQGKWGIIKKYFESMKIRGNKEYGA 362
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+A L+ + GK +L G + P F + Q E+ + ++ M
Sbjct: 363 VYAVLVDIYGQYGKFQNARECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIM 422
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 103/506 (20%), Positives = 210/506 (41%), Gaps = 51/506 (10%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M SGL+ L++G + + RQ +L +K + + S + Y ++ +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELL---VEMKKRNIVISPYTYGTVVKGMCS 429
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
+G A I M+ P++ Y ++ T Q + +++++ M+++
Sbjct: 430 SGDLDGAYNIVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG------ 482
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+ PD+ YN+++ + + ++ ++GLKP+A TYG + +
Sbjct: 483 ---------IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++ ++ ++ ++M + G + L+ + ++ K+ EA +A R+M +G++G A
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAK 593
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y L L N + DA + +++ + P ++ LI G++ SIF
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 481 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYTFL------SGD 529
M ++ PN+ N +L + R+ KAKEL +E + N+ Y + SGD
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 530 GAP------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
A L PD + Y+++++ + E ++ G GC
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNA 771
Query: 578 LLVEASRAGKCHLLEHAFDSLLEA-----GEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
L+ + GK L + L++ G+ P+ + + M+ + N E A L +
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGK-PNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 633 MAYAPFHITERQWTELFESNEDRISR 658
M A T +T L + D++ R
Sbjct: 831 MQNANLMPTVITYTSLL-NGYDKMGR 855
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 127/347 (36%), Gaps = 32/347 (9%)
Query: 322 NACVPSHQWKGVF----WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
+ C+ +GV +F + SGL P A Y +E + +E +M K
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
I TY +V+ G ++ A V+ M G +Y L N R+ D
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 496
AM V++++K + P + LII +D+ S M ++ +PN T A +
Sbjct: 471 AMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 497 KVYSRNDMFSKA----KELFEETTRAN--------------------SSGYTFLSGDGAP 532
Y F+ A KE+ E N S Y + G
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQG-- 587
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
+ D TY+ ++ + + E +++ M G D + L+ S+ G
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 639
FD ++E G P+ + + +L EKA L++ M+ H
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 167/429 (38%), Gaps = 35/429 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F Y ++ L K G + R+F + + + L PD+ Y+S+ G+VG L+E+ L
Sbjct: 229 SVFTYNVMIDYLCKEGDLENSRRLF-VQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 287
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
M+ D PD++ YN ++N + F F +++ +GLK
Sbjct: 288 FNEMK---------------DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 332
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ + G + M ++G TY L+ A + G + EA
Sbjct: 333 PNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKL 392
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIIS 464
+ +M Q GV Y L LC GR +A E +S+ P + +T L+
Sbjct: 393 LNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE---EVFRSMLKDGISPNQQVYTALVHG 449
Query: 465 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ ++D + I + M + + +P++ +++ + + K + EE S
Sbjct: 450 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 509
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+S +++++A A + ++ M G + + L+
Sbjct: 510 PVIS-------------TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 556
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
AG L F +L G P+ +T ++ + E A L + M
Sbjct: 557 EAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDIT 616
Query: 644 QWTELFESN 652
+T L + N
Sbjct: 617 AFTALIDGN 625
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 123/299 (41%), Gaps = 15/299 (5%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F ++R P A + + + +SG LV +FF M +G A TY V++ +
Sbjct: 183 FSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCK 242
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
EG + + M + G+ Y L G ++ + ++K + P I
Sbjct: 243 EGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV-GCVPDII 301
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ GLI + F MK++ +PN+ T + ++ + + M A +L +
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDM 361
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
R L P+E+TY+S+++A+ A + M +G +L+ +
Sbjct: 362 RRTG-------------LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 408
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
LL +AG+ E F S+L+ G P+ +T ++ I E A+ ++ M
Sbjct: 409 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 133/315 (42%), Gaps = 31/315 (9%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L + F YT L+ KAG EA ++ N ML+ + +I Y ++ L + G + E
Sbjct: 367 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ-AGVKLNIVTYTALLDGLCKAGRMIEAE 425
Query: 285 KLIERMRQ---KPSKRI---------------------KNMHRKNWDPVLEPDLVVYNAV 320
++ M + P++++ K M N ++PDL++Y ++
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN----IKPDLILYGSI 481
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+ + + + ++++ G+ + ++ ++GK FF++M G
Sbjct: 482 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 541
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+TY VL+ E G + AV M G+ +VY L LC N + A
Sbjct: 542 EATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKK 601
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY 499
+ ++++ R P FT LI ++ G++ + + + M + E ++ +++ +
Sbjct: 602 LFDEMQC-RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 660
Query: 500 SRNDMFSKAKELFEE 514
S+ +A++ F E
Sbjct: 661 SQCGELHQARKFFNE 675
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 141/352 (40%), Gaps = 24/352 (6%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
WK + M Q+G+ LL GL G +A V + LKD + VYT L
Sbjct: 390 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM--LKDGISPNQQ-VYTAL 446
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ KA R +A++I M E CN+ PD+ Y S+ L+E ++E M+ +
Sbjct: 447 VHGYIKAERMEDAMKILKQMTE-CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ + V+ +++A + + F++++ G++ + TY +
Sbjct: 506 ---------------ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 550
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + ++G +L ++F +M G Y L+ I A M+ RG
Sbjct: 551 LIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRG 610
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ + + L +G Q+A++++ ++ L L + +T L+ G +
Sbjct: 611 MTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV-YTSLVSGFSQCGELHQA 669
Query: 475 ISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
F M + P +L+ Y + +A EL E R Y+F
Sbjct: 670 RKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERM---AYSF 718
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 126/313 (40%), Gaps = 24/313 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++ + +Y+ +++ K VFK+L++ G P+ TYG + + + GK
Sbjct: 445 IDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKAL 504
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E R M + G TY +++ F + A A +M + G+ +Y +
Sbjct: 505 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C G A+ V++++ LRH +P TF +I G + + +F M+ C P
Sbjct: 565 CGMGNMDRAIQTVKEMQKLRH-RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT 623
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T N ++ KA E+ +E T A S +E+TY+ +++ A
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA-------------NEHTYTKIMQGYA 670
Query: 549 ----TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
T +EYF + G +D + LL ++G+ A + A I
Sbjct: 671 SVGDTGKAFEYFTRLQN----EGLDVDIFTYEALLKACCKSGRMQ-SALAVTKEMSARNI 725
Query: 605 PHPLFFTEMLIQA 617
P F +LI
Sbjct: 726 PRNSFVYNILIDG 738
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 157/364 (43%), Gaps = 48/364 (13%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK---ELVKLIERMRQKPSKR----IK 299
A +F M+++ + PD+ Y+++ +G + + VK ++++R +P+ R I
Sbjct: 538 AFAVFEDMVKE-GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 300 NMHRKNWD-----PVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ + K+ D V + P + +N ++N V Q + + ++ +G+
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
+ TY M+ G E+F ++ G + TY+ L++A + G++ A+A
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M R + + VY L G +A +++++K KP T+T I +
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK-EGVKPDIHTYTSFISACS 775
Query: 467 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G ++ + M+ +PNI T ++K ++R + KA +EE
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM---------- 825
Query: 526 LSGDGAPLKPDEYTY----SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
+KPD+ Y +S+L ++ A Y+Y G+ ++ C+ + A L+V+
Sbjct: 826 ---KAMGIKPDKAVYHCLLTSLLSRASIAEA-----YIYSGV-MTICK--EMVEAGLIVD 874
Query: 582 ASRA 585
A
Sbjct: 875 MGTA 878
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/343 (16%), Positives = 139/343 (40%), Gaps = 15/343 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P +Y ++++A +++++ G++ S TY + + ++G +
Sbjct: 340 ITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAAD 399
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+F + + + + A Y ++ A + + A A VR ME+ G+ ++Y+ +
Sbjct: 400 YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY 459
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ ++V +++K + P +T+ LI G I + + + MK+ + N
Sbjct: 460 TMVADEKKGLVVFKRLKECGFT-PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHN 518
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T + M+ + + ++ A +FE+ + +KPD Y++++ A
Sbjct: 519 LKTYSMMINGFVKLKDWANAFAVFEDMVKEG-------------MKPDVILYNNIISAFC 565
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ K M + ++ +++G FD + G +P
Sbjct: 566 GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVH 625
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
F ++ + + EKAV +++ M A E +T++ +
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 152/398 (38%), Gaps = 34/398 (8%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL + L + D + + L + GK G EAL +F+ M+++ P++ Y
Sbjct: 110 AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIG---EALHLFDKMIDE-GFQPNVVTYG 165
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +VG ++L+ M Q +PD+V+Y +++++
Sbjct: 166 TLINGLCKVGNTSAAIRLLRSMEQGNC---------------QPDVVIYTSIIDSLCKDR 210
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
Q F +F Q+ G+ P TY + + ++ V +M S + +
Sbjct: 211 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 270
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+V A +EGK+ EA V M QRGV Y L C +A+ V + +
Sbjct: 271 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR- 329
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ P I++T LI ID + +F+ M + P+ T N ++
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQD 389
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A LF E PD TYS +L++ E + K + S
Sbjct: 390 AIALFHEMVARGQ-------------MPDLVTYSILLDSLCKNCHLEEAMALLKAIEASN 436
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
D + ++ RAG+ F +L G P
Sbjct: 437 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHP 474
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 130/318 (40%), Gaps = 35/318 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F YT L+ L + N M+ + PD+ + +V L + G + E ++++
Sbjct: 232 FTYTSLVHALCNLCEWKHVTTLLNQMVNS-KILPDVVIFSTVVDALCKEGKVTEAHEIVD 290
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKP 347
M Q+ +EPD+V Y +++ C+ S + V VF + + G P
Sbjct: 291 MMIQRG---------------VEPDVVTYTTLMDGHCLQSEMDEAV-KVFDMMVRKGFAP 334
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+Y + + K D F +M + TY L+ G++ +A+A
Sbjct: 335 DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALF 394
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM- 466
M RG + Y L LC N ++AM +++ I++ + P +I +II M
Sbjct: 395 HEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEA-SNLNP-DIQVYNIIIDGMC 452
Query: 467 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G ++ +F ++ P++ T N M+ + + ++A +LF E
Sbjct: 453 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM---------- 502
Query: 526 LSGDGAPLKPDEYTYSSM 543
DG PD TY+++
Sbjct: 503 ---DGNDCSPDGCTYNTI 517
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 137/393 (34%), Gaps = 51/393 (12%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V + +L + + V + Q+ G+ P+ T + + +
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G T+ L+R EGKI EA+ M G Y L LC
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
G A I+ LR SM+ G +C+P++
Sbjct: 174 VGNTSAA------IRLLR---------------SMEQG--------------NCQPDVVI 198
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+++ ++ ++A LF + G + PD +TY+S++ A
Sbjct: 199 YTSIIDSLCKDRQVTEAFNLFSQMV-------------GQGISPDIFTYTSLVHALCNLC 245
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+W++ + M S D + ++ + GK D +++ G P + +T
Sbjct: 246 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 305
Query: 612 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 671
++ +QS ++AV + + M F +T L DK L +C
Sbjct: 306 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 365
Query: 672 NAASSEITVSNLSRALHALCRSEKERDLSSSAH 704
T + L +H LC + +D + H
Sbjct: 366 EWIPDTKTYNTL---MHGLCHVGRLQDAIALFH 395
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 123/312 (39%), Gaps = 21/312 (6%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+VD L + + + V +M Q G+ L+ G + +A+ V D +
Sbjct: 272 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ S YT L+ K + +A+ +F M PD Y+++ L VG L
Sbjct: 332 FAPDVIS---YTTLINGYCKIHKIDKAMYLFEEMCRK-EWIPDTKTYNTLMHGLCHVGRL 387
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++ + L M + PDLV Y+ +L++ + + + K +
Sbjct: 388 QDAIALFHEMVARGQM---------------PDLVTYSILLDSLCKNCHLEEAMALLKAI 432
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
S L P Y + ++ M ++G+ + + F ++ G TY +++ + G +
Sbjct: 433 EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLL 492
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
NEA M+ Y +A N A+ ++E++ + S +++ T
Sbjct: 493 NEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSA--DVSTTT 550
Query: 461 LIISSMDGGHID 472
L++ + +D
Sbjct: 551 LLVEMLSDDGLD 562
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/362 (17%), Positives = 133/362 (36%), Gaps = 54/362 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P++ N ++N+ ++ F V ++ K G +P T+ + + GK
Sbjct: 87 VPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 146
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ----------------- 412
F KM G +TY L+ + G + A+ +R+MEQ
Sbjct: 147 HLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSL 206
Query: 413 ------------------RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-- 452
+G+ Y L LCN W+ V + + +SK
Sbjct: 207 CKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKH---VTTLLNQMVNSKIL 263
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P + F+ ++ + G + + I M + EP++ T ++ + +A ++
Sbjct: 264 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F+ R PD +Y++++ H+ + Y+++ M D
Sbjct: 324 FDMMVRKG-------------FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD 370
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
+ L+ G+ F ++ G++P + ++ +L + E+A+AL+
Sbjct: 371 TKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLK 430
Query: 632 AM 633
A+
Sbjct: 431 AI 432
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 19/299 (6%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VY+ ++ L K G+ EA +F+ M + + P++ Y+SV L
Sbjct: 213 VYSTVVHGLFKEGKVGEACDLFHEMTQQ-GVPPNVVTYNSVIHAL--------------- 256
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + + + + R+ ++PD V YN +++ QWK +FK++ G+ P+
Sbjct: 257 CKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNT 316
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
T + + + G+ + EFF M G + ++Y L+ + G + +
Sbjct: 317 VTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNL 376
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + G+V V+ L G ++AM + E ++ R P +T+ +I + G
Sbjct: 377 MVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQK-RGLNPDVLTYLAVIHAFCRMG 435
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
+DD + F HM D EPN +++ + + KA+EL E R G LS
Sbjct: 436 SMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYE-IRNKGLGPCILS 493
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G +A + VY +++K + L+ L K GR EA RIF++++
Sbjct: 462 LIQGFCTHGDLVKAE---ELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMII 518
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D+ + S+ +G + E ++ H +EPD+V
Sbjct: 519 RT-GEKADVNIFTSLIDGYCLIGKMSEAFRV---------------HDAMVSVGIEPDIV 562
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++N C + + +F++L G+KP+ TYG+ ++ + +G+ E F++M
Sbjct: 563 TYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEM 622
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+SG A+ TY +L+ EA+ + +
Sbjct: 623 IESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKL 657
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 143/377 (37%), Gaps = 39/377 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W+QA+ + + + + + + +A L K GR EA F+ ML
Sbjct: 287 LIHGYSTLGQWKQAVRMFKE---MTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSML 343
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ +I +Y ++ G L ++ L M + D ++ P+
Sbjct: 344 AKGHKL-NIISYSTLLHGYATAGCLVDMSNLFNLMVR--------------DGIV-PNQH 387
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
V+N ++N + ++F+ ++K GL P TY + + G D + F M
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM 447
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G Y+ L++ F G + +A V + +G+ + L LC GR
Sbjct: 448 IDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRV 507
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
+A + + I + I FT LI G + + + M EP+I T
Sbjct: 508 FEAQRIFDMIIRTGEKADVNI-FTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGT 566
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE----ASATA 550
++ +N LF E +KP +TY +L+ A TA
Sbjct: 567 LVNGCCKNGRIDDGLILFRELLHKG-------------VKPTTFTYGIILDGLFHAGRTA 613
Query: 551 HQWEYF-EYVYKGMALS 566
E F E + G+A++
Sbjct: 614 AAKEMFQEMIESGIAVT 630
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 107/259 (41%), Gaps = 16/259 (6%)
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY + ++ ++ + DL FF + + G + L+R + + +EAV
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 407 V-RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M + G V A Y + +C++GR Q A+ ++ P + ++
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 466 M-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ G + + +F M PN+ T N+++ + KA+ + +
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQ--------- 271
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+ G+G ++PD TY++++ +T QW+ ++K M G + + +
Sbjct: 272 --MVGNG--VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLC 327
Query: 584 RAGKCHLLEHAFDSLLEAG 602
+ G+ FDS+L G
Sbjct: 328 KHGRIEEAREFFDSMLAKG 346
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 126/311 (40%), Gaps = 34/311 (10%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-FVYTKLLAIL 238
+M + G++ + L+ G G R+AM +++ KR L Y ++
Sbjct: 376 LMVRDGIVPNQHVFNILVNGYAKCGMVREAM----FIFEDMQKRGLNPDVLTYLAVIHAF 431
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP---- 294
+ G +A+ FN M+ D + P+ A Y + G L + +L+ +R K
Sbjct: 432 CRMGSMDDAMDKFNHMI-DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPC 490
Query: 295 -------------------SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
++RI +M + + + D+ ++ ++++ + F
Sbjct: 491 ILSFASLINHLCKEGRVFEAQRIFDMIIRTGE---KADVNIFTSLIDGYCLIGKMSEAFR 547
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V + G++P TYG + ++G+ D FR++ G TY +++ +
Sbjct: 548 VHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLF 607
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G+ A + M + G+ T Y L LC N ++A+ V +K+ ++ + +
Sbjct: 608 HAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAM--NVKFD 665
Query: 456 ITFTGLIISSM 466
I ++IS M
Sbjct: 666 IVILNIMISKM 676
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 125/329 (37%), Gaps = 34/329 (10%)
Query: 310 LEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
++ D++V +++L C + V +F ++ + G P A +Y ++ + G+
Sbjct: 134 MKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWA 193
Query: 369 HEFFRKMAKSGEA--IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ R K G + Y +V ++EGK+ EA M Q+GV Y +
Sbjct: 194 LDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVI 253
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 485
LC A ++ ++ +P +T+ LI G + +F+ M
Sbjct: 254 HALCKARAVDKAQGILRQMVG-NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGV 312
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PN T + + ++ +A+E F+ + G+ K + +YS++L
Sbjct: 313 IPNTVTCSTFVAFLCKHGRIEEAREFFDSML---AKGH----------KLNIISYSTLLH 359
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
ATA GC +D + L+V H+ + + G +
Sbjct: 360 GYATA----------------GCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVR 403
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+F E + + + + +A+I+A
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFC 432
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F Y +L L AGR A +F M+E +AVT+ +L L
Sbjct: 595 TTFTYGIILDGLFHAGRTAAAKEMFQEMIES-----------GIAVTIPTYSIL-----L 638
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
R ++ + +K ++ D+V+ N +++ + + + +F + GL
Sbjct: 639 TGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLV 698
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY + ME +++ G + F M KSG + + V+VR E+G+I +A
Sbjct: 699 PTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIY 758
Query: 407 VRNMEQRGVV---GTASVYYELACC 428
+ ++ + ++ TAS+ L C
Sbjct: 759 MCRVDGKSILFEASTASMLLSLFSC 783
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 120/313 (38%), Gaps = 26/313 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-----GLKPSAATYGLAMEVMLQSGKYD 366
PD + Y+ VL + + + W LR + G + Y + + + GK
Sbjct: 172 PDAISYSTVLKSVCDDGRSQ---WALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVG 228
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ F +M + G +TY ++ A + +++A +R M GV Y L
Sbjct: 229 EACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLI 288
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDH 484
G+W+ A+ + +++ S R P +T + + G I++ F M K H
Sbjct: 289 HGYSTLGQWKQAVRMFKEMTS-RGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGH 347
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+ NI + + +L Y+ LF R DG + P+++ ++ ++
Sbjct: 348 -KLNIISYSTLLHGYATAGCLVDMSNLFNLMVR-----------DG--IVPNQHVFNILV 393
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
A ++++ M G D + ++ R G F+ +++ G
Sbjct: 394 NGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVE 453
Query: 605 PHPLFFTEMLIQA 617
P+ + + LIQ
Sbjct: 454 PNFAVY-QCLIQG 465
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/445 (18%), Positives = 181/445 (40%), Gaps = 39/445 (8%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
L+++ + +++ F Y L+ L KA + +A + + M+ D + PD ++S+
Sbjct: 246 LEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMV-DRGVTPDTVTFNSIMD 304
Query: 273 TLGQVGLLKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEP 312
L + G + L+ M +Q+ R K++ + P
Sbjct: 305 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVP 364
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+V Y+ + + + F + K++ G P+ TY ++ + ++ K + +E
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELL 424
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+ SG +TY ++V +EG++++A+ V M +RG + Y L LC
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 484
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV 492
GR +A + +++ S + + + L+ + + ++ P I
Sbjct: 485 GRVDEAHHIFKEMVS-KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG--TPYIDVY 541
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
NA++ Y + + +FE+ ++ G P+ TY+ +++ +
Sbjct: 542 NALMDGYCKEGRLDEIPNVFED-----------MACRGC--VPNIKTYNIVMDGLCKHGK 588
Query: 553 W-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
E F ++ + M +GC D + ++ +A K D +++AG P + +
Sbjct: 589 VDEAFPFL-ESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYN 647
Query: 612 EMLIQAIVQSNYEKAVALINAMAYA 636
++ Q + ++ AV ++ M A
Sbjct: 648 TLMAQFCKEERFDDAVGILKNMIKA 672
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 164/432 (37%), Gaps = 38/432 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F L L + G +F ML D PD YH V +L Q+ + + +
Sbjct: 124 STFTRNCFLQTLLENGSSDRIPAMFERML-DAGYAPDSYTYHLVIKSLCQMNQIDKAFTM 182
Query: 287 IERMRQ---KPSKRIKNMHRKNWDP-------------VLEPDLVVYNAVLNACVPSHQW 330
+++ + KP + + + + + PD + YNA+++ +
Sbjct: 183 LDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDC 242
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
G K++ + + P TY + ++ + ++ K D E +M G +T+ +
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSI 302
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC---NNGRWQDAMLVVEKIKS 447
+ + GK A + + M +R + Y L LC N R +D LV E + S
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKD--LVDEFVSS 360
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
P +T++ L G ID+ + + M C PN+ T N ++ +
Sbjct: 361 --GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTE 418
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
KA EL E SSG+ PD TY+ +++ + + + +GM
Sbjct: 419 KAYELLESLV---SSGFV----------PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR 465
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
GC + L+ R G+ H F ++ L + ++ S ++A
Sbjct: 466 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 525
Query: 627 VALINAMAYAPF 638
+++ + P+
Sbjct: 526 QKVVDGIRGTPY 537
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 108/552 (19%), Positives = 208/552 (37%), Gaps = 92/552 (16%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
L+D L + T K ++ + + SG + ++ GL +G +A L V G+
Sbjct: 406 TLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKA---LKMVEGM 462
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVG 278
+ S YT L+ L + GR EA IF M+ +DC D AY S+ +
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT--ADALAYVSLVNGYCKSS 520
Query: 279 LLKELVKLIERMRQKPSKRIKNM----------------------------HRKNWD--- 307
KE K+++ +R P + N + K ++
Sbjct: 521 RTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 580
Query: 308 -------------PVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
P LE PD+V YN +++ + + K V Q+ ++G+
Sbjct: 581 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 640
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P A TY M + ++D + M K+G +TY L+ + ++ +A
Sbjct: 641 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 700
Query: 407 VRNMEQRG-VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M + G VV + Y + LC G + A+L+++ + + +T+ I
Sbjct: 701 MHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG-HGVEANTVTYNIFIDRL 759
Query: 466 MDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS---SG 522
G +D+ S+ M D + ++ + + + +A +L E +
Sbjct: 760 CKEGRLDEASSLLSEM-DTLRDEVSYTTVIIGL-CKAEQLDRASKLAREMVAVKGLCITS 817
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASAT-----AHQWEYFEYVYKGMALSG-CQLDQTKHA 576
+TF L D +T + L+ + T + + M ++ C+LD+ A
Sbjct: 818 HTF------NLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKA 871
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
W L FD + G + + +T ++ Q ++A+ ++ MA +
Sbjct: 872 WEL---------------FDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASS 916
Query: 637 PFHITERQWTEL 648
I + +W ++
Sbjct: 917 DCEIDDLKWEDV 928
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 150/368 (40%), Gaps = 47/368 (12%)
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L +GLL+ + ER+ Q W L+P +V + VL + Q
Sbjct: 67 VLDLLGLLQSGSNIRERLEQ-------------WRGTLQPAVV--SRVLQR-LKDPQTAI 110
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
VF+V+ R G K S T ++ +L++G D + F +M +G A + TY ++++
Sbjct: 111 VFFVWAGDR--GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIK 168
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
+ + +I++A + + RG SVY L C GR +DA+ + I S
Sbjct: 169 SLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----- 223
Query: 453 PLEITFTGLIISSMDGGHI--DDCISIFQHMKDHCE----PNIGTVNAMLKVYSRNDMFS 506
P I + +I GH +DC + +K+ E P++ T N ++ +
Sbjct: 224 PDAIAYNAII-----HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTD 278
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
KA E+ E G T PD T++S+++ A ++E + MA
Sbjct: 279 KASEMLHEMV---DRGVT----------PDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 325
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
C+ + L+ + + D + +G +P + ++ + + ++A
Sbjct: 326 NCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEA 385
Query: 627 VALINAMA 634
L+ M+
Sbjct: 386 FELVKEMS 393
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 128/281 (45%), Gaps = 17/281 (6%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y KL+ +LGK +P +A ++F M+++ P++ +Y ++ T + G +E L++R
Sbjct: 143 IYIKLITMLGKCKQPEKAHQLFQAMIDE-GCAPNLQSYTALVSTYSRSGRFREAFDLLDR 201
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ P +PD+ Y+ ++ +C+ ++ ++ V + + ++G+ P+
Sbjct: 202 MKDTPG--------------CQPDVQTYSILIKSCLHAYDFEKVKSLLADMARAGIPPNT 247
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY ++ ++G++ + KM T +RAF G+I +
Sbjct: 248 VTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQIETMESCYEK 307
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ G+V Y L ++ V+E ++ +S + +T+ +I + G
Sbjct: 308 FQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTI-VTYNVVIDAFGRAG 366
Query: 470 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAK 509
++ IF+ MK + +PN T+ ++++ Y R K K
Sbjct: 367 DLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIK 407
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
RW A+ V E ++ KP + LI + +FQ M D C PN+ +
Sbjct: 120 RWDSALKVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQSY 179
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
A++ YSR+ F +A +L + D +PD TYS ++++ A+
Sbjct: 180 TALVSTYSRSGRFREAFDLLDRMK------------DTPGCQPDVQTYSILIKSCLHAYD 227
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
+E + + MA +G + + L+ +AG+ +E +L
Sbjct: 228 FEKVKSLLADMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKML 274
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 112/286 (39%), Gaps = 41/286 (14%)
Query: 325 VPSHQWKGVFWVFKQLR-KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
V + +W VF+ +R + KP Y + ++ + + + H+ F+ M G A
Sbjct: 116 VAALRWDSALKVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPN 175
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+Y LV + G+ EA + M+ Y + C + E
Sbjct: 176 LQSYTALVSTYSRSGRFREAFDLLDRMKDTPGCQPDVQTYSILIKSCLHA------YDFE 229
Query: 444 KIKSLRHS------KPLEITFTGLIISSMDGGHIDDCIS-IFQHMKDHCEPNIGTVNAML 496
K+KSL P +T+ LI + G + S + + + +C+P++ T+N+ L
Sbjct: 230 KVKSLLADMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTL 289
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
+ + + + +E + +SG + P+ TY+ +L++ A +E
Sbjct: 290 RAFGSSGQIETMESCYE---KFQASG----------IVPNIKTYNILLDSYGKAKMYEKM 336
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEAS-------RAGKCHLLEHAF 595
V + M + ++W +V + RAG +E+ F
Sbjct: 337 GAVMEYM-------QKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIF 375
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 101/254 (39%), Gaps = 17/254 (6%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ GKAGR E ML N PD+ +S G G ++ + E+
Sbjct: 249 TYNTLIDAYGKAGRFAEMESTLLKMLSQ-NCKPDVWTMNSTLRAFGSSGQIETMESCYEK 307
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + P++ YN +L++ + ++ + V + ++K +
Sbjct: 308 FQASG---------------IVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTI 352
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + ++ ++G + + FR M +T +VRA+ G++ + A+R
Sbjct: 353 VTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALRI 412
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+E + + L G + +++ +K R KP ++T T +I + G
Sbjct: 413 IENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHR-CKPDKVTCTTMIKWFLIKG 471
Query: 470 HIDDCISIFQHMKD 483
D + + +KD
Sbjct: 472 IDDHRVQYLRDLKD 485
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 139/329 (42%), Gaps = 23/329 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD+V YNAVL + +W V + +++ + P+ T+ + + ++G ++ VHE
Sbjct: 224 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 283
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+M + G Y ++ +EG + A + M G+ Y L LC
Sbjct: 284 VLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLC 343
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ RW++ ++ ++ PL ++TF L+ G +D I + + M + C P+
Sbjct: 344 SAERWEETEELLAEM--FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPD 401
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T ++ + + + +A L + T KP+ +Y+ +L+
Sbjct: 402 VITYTTVINGFCKEGLIDEAVMLLKSMTACGC-------------KPNTISYTIVLKGLC 448
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIP 605
+A +W E + M GC L+ L+ + G L+E A + L L G P
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKG---LVEQAIELLKQMLVNGCSP 505
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ ++ ++ ++A+ L+N M
Sbjct: 506 DLISYSTVIDGLGKAGKTDEALELLNVMV 534
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 170/415 (40%), Gaps = 59/415 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG---RPHEALRIFN 252
+LKGL W +++ + + ++ + + L++ L + G R HE L
Sbjct: 233 VLKGLCMAKRWGCVQELMEEMVRMACPPNIVT---FNTLISYLCRNGLFERVHEVLA--Q 287
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
++ C PDI Y ++ + + G L+ +++ RM PS +K P
Sbjct: 288 MVEHGCT--PDIRMYATIIDGICKEGHLEVAHEILNRM---PSYGLK------------P 330
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
++V YN +L + +W+ + ++ T+ + ++ Q+G D V E
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 390
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M + G +TY ++ F +EG I+EAV +++M G Y + LC+
Sbjct: 391 EQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSA 450
Query: 433 GRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
RW DA ++ ++ ++ PL ITF LI G ++ I + + M + C P++
Sbjct: 451 ERWVDAEDLMSQM--IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508
Query: 491 TVNAMLKVYSRNDMFSKAKELF--------EETTRANSSGYTFLSGDG------------ 530
+ + ++ + +A EL T SS + LS +G
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568
Query: 531 --APLKPDEYTY----SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++ D Y SS+ + T E+ Y M SGC +++ + L+
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAY----MVSSGCVPNESTYTILI 619
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 129/319 (40%), Gaps = 47/319 (14%)
Query: 116 LKEMFEKDLNWVLDDDVQLG--SDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAK 173
L EMF+KD DDV D+F +N + + L++++ ER
Sbjct: 355 LAEMFDKDCPL---DDVTFNILVDFFCQN----------GLVDRVIELLEQMLERGCMPD 401
Query: 174 NWKFVRIMN---QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK---DKRDLKS 227
+ ++N + GL+ +LK + G K + VL + + D DL S
Sbjct: 402 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMS 461
Query: 228 RFV----------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + + L+ L K G +A+ + ML + PD+ +Y +V LG+
Sbjct: 462 QMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTVIDGLGKA 520
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G E ++L+ M K + P+ ++Y+++ +A + V +F
Sbjct: 521 GKTDEALELLNVMVNKG---------------MSPNTIIYSSIASALSREGRINKVIQMF 565
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
++ + ++ A Y + + + G+ + EF M SG TY +L+R E
Sbjct: 566 DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 625
Query: 398 GKINEAVAAVRNMEQRGVV 416
G + EA + + +G +
Sbjct: 626 GFVKEAQEMLTELCSKGAL 644
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 126/325 (38%), Gaps = 15/325 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P+ Y V+ A + V ++ + G P Y + +E + G +
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ G A+ +++ A ++G ++EA+ +R++ G Y + L
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C RW ++E++ + P +TF LI G + + M +H C P+
Sbjct: 238 CMAKRWGCVQELMEEMVRM-ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 296
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I ++ + A E+ R S G LKP+ Y+++L+
Sbjct: 297 IRMYATIIDGICKEGHLEVAHEILN---RMPSYG----------LKPNVVCYNTLLKGLC 343
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+A +WE E + M C LD L+ + G + + +LE G +P +
Sbjct: 344 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVI 403
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM 633
+T ++ + ++AV L+ +M
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSM 428
>gi|8778500|gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
Length = 554
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 155/402 (38%), Gaps = 70/402 (17%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+ A W G ++ R + Y L+ I + G R+ + M++D YP A
Sbjct: 210 KLAYKFFVWCGGQENFRHTAN--CYHLLMKIFAECGEYKAMCRLIDEMIKDG--YPTTAC 265
Query: 267 -YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
++ + T G+ GL +++V+ + ++ K N+ P YNA+L++ +
Sbjct: 266 TFNLLICTCGEAGLARDVVE--QFIKSKTF---------NYRPYKHS----YNAILHSLL 310
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
Q+K + WV++Q+ + G P TY + M + GK D ++ +M K G +
Sbjct: 311 GVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLY 370
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY +L+ K A+ + +M + GV
Sbjct: 371 TYNILLHHLATGNKPLAALNLLNHMREVGV------------------------------ 400
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDM 504
+P I FT LI G ++ C + +K C P++ M+ Y
Sbjct: 401 ------EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 454
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
KA+E+F+E T P+ +TY+SM+ A +++ + K M
Sbjct: 455 LEKAEEMFKEMTEKGQ-------------LPNVFTYNSMIRGFCMAGKFKEACALLKEME 501
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
GC + ++ L+ AGK ++E G H
Sbjct: 502 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVH 543
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 125/327 (38%), Gaps = 19/327 (5%)
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
A Y +L++ F E G+ + M + G TA + L C G +D +
Sbjct: 229 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFI 288
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 502
K K+ + +P + ++ ++ S + +++ M +D P++ T N ++ R
Sbjct: 289 KSKTFNY-RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRL 347
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+ L +E + DG PD YTY+ +L AT ++ +
Sbjct: 348 GKTDRLYRLLDEMVK-----------DG--FSPDLYTYNILLHHLATGNKPLAALNLLNH 394
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M G + L+ SRAGK ++ D ++ G P + +T M+ I
Sbjct: 395 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 454
Query: 623 YEKAVALINAM---AYAPFHITERQWTELF-ESNEDRISRDKLEKLLNALCNCNAASSEI 678
EKA + M P T F + + + + L+++ + CN N
Sbjct: 455 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 514
Query: 679 TVSNLSRALHALCRSEKERDLSSSAHF 705
V+NL A L E +D+ H+
Sbjct: 515 LVNNLKNAGKVLEAHEVVKDMVEKGHY 541
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 18/265 (6%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
+A + EA+ FN+M E + P++AA++S+ L + +++ ++ ++M +
Sbjct: 148 ARAQKFDEAVYTFNIM-EKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGR----- 201
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
PD Y+ +L + + V+ ++ +G +P TYG+ ++
Sbjct: 202 -----------FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDS 250
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ ++G+ + + M+ G Y VLV + E +I +AVA +ME+ G+V
Sbjct: 251 LCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPD 310
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
VY L C ++++A V++ ++ P T+ ++ + G D+ +F
Sbjct: 311 VVVYNALVTAFCKVKKFENAFRVMDDMEG-HGIAPNSRTWNIILNKLISLGKDDEAYRVF 369
Query: 479 QHMKDHCEPNIGTVNAMLKVYSRND 503
+ M C+P+ T M+K++ ND
Sbjct: 370 RRMIKRCQPDSDTYTMMIKMFCEND 394
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 136/323 (42%), Gaps = 59/323 (18%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
IM + G++ LL L + R+A + D + G + D K+ Y+ LL G
Sbjct: 162 IMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNG-RFNPDAKT---YSILLEGWG 217
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK 296
KA + +++ ML D PDI Y + +L + G ++E V +++ M + P+
Sbjct: 218 KAPNLPKMREVYSEML-DAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTT 276
Query: 297 RIKNMHRKNW-------DPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
I ++ + D V + PD+VVYNA++ A +++ F V
Sbjct: 277 FIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDD 336
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG---------------- 383
+ G+ P++ T+ + + ++ GK D + FR+M K +
Sbjct: 337 MEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMIKMFCENDNV 396
Query: 384 --AL----------------TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
AL T+ VL+ ++G++++A + +M ++G+ S + +L
Sbjct: 397 EMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKL 456
Query: 426 ACCLCNNGRWQDAMLVVEKIKSL 448
L GR +V+K+K L
Sbjct: 457 RQLLLKEGRKDVLEFLVDKMKIL 479
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 115/314 (36%), Gaps = 57/314 (18%)
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
W KQ ++ G + +Y + + + +Y L+ + M + G + T+ +++R +
Sbjct: 90 WARKQ-KRGGCNHTIRSYHTVVASLAKIRQYQLMWDVVAIMRREG-VVNVETFGIIMRKY 147
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
K +EAV ME+ GVV + + L LC K K++R ++
Sbjct: 148 ARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALC-------------KSKNVRKAQ-- 192
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
IF M P+ T + +L+ + + K +E++ E
Sbjct: 193 ---------------------EIFDKMNGRFNPDAKTYSILLEGWGKAPNLPKMREVYSE 231
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
A +PD TY M+++ + E V + M+ GCQ
Sbjct: 232 MLDAGC-------------QPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFI 278
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
++ L+ G +E A + L+ G +P + + ++ +E A +++
Sbjct: 279 YSVLV---HTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMD 335
Query: 632 AMAYAPFHITERQW 645
M R W
Sbjct: 336 DMEGHGIAPNSRTW 349
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 181/467 (38%), Gaps = 62/467 (13%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
FT G + L LG +A L + G+ + +Y ++ L G EA
Sbjct: 176 FTFGVAARALCRLG------RADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA 229
Query: 248 LRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
+ N ++L C D+ + V + +G ++E +L++RM K
Sbjct: 230 ATLLNEMLLMGCAA--DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCM---------- 277
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
P ++ Y +L Q + ++ + + + + L GK
Sbjct: 278 -----PGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLA 328
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
E + M G A TY +L+ + G+I AV +R ME++G Y +
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 388
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT---FTGLIISSMDGGHIDDCISIFQHMKD 483
C NG W D ++E++ + K L + + G+I + G +D+ + + Q M+
Sbjct: 389 HSFCKNGMWDDTRALLEEMSA----KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444
Query: 484 H-CEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYTFLSGDGAPLKPDEY 538
C P+I + N ++ N+ +A+ +FE E AN
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG-----------------I 487
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH----LLEHA 594
TY++++ A +W+ + K M L GC LD + L+ + G LLE
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
+ ++ + + + +E+ + V+ E + ++N AP +T
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLN-QGLAPDIVT 593
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 127/308 (41%), Gaps = 35/308 (11%)
Query: 242 GRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G+ EA ++ M L+ C PD Y + L ++G + V+L+ M +K
Sbjct: 325 GKLAEATELYETMGLKGCQ--PDAHTYSILMHGLCKLGRIGSAVRLLREMEKK------- 375
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
P++V Y VL++ + W + +++ GL ++ Y + +
Sbjct: 376 --------GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ G+ D ++M G +Y ++ ++ EA N+ + GVV
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQ 479
Y + L +GRWQDA+ + +++ + H L+ +++ GLI + G++D + + +
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEM--ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M + +PN + N ++ + A EL ++ L PD
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG-------------LAPDIV 592
Query: 539 TYSSMLEA 546
TY++++
Sbjct: 593 TYNTLING 600
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/474 (19%), Positives = 179/474 (37%), Gaps = 47/474 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +L++L +A +AL ++ M+ + P + A L ++G E + L+
Sbjct: 142 YNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALL--- 198
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ M R PD V+Y V++A + ++ G
Sbjct: 199 --------RGMARHG----CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVN 246
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + M G+ +M G G +TY L++ + +EA A + +
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ VV +V + CL G+ +A + E + L+ +P T++ L+ G
Sbjct: 307 PELNVVLFNTV---IGGCL-AEGKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGR 361
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
I + + + M K PN+ T +L + +N M+ + L EE + + G T
Sbjct: 362 IGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS---AKGLTL---- 414
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
+ Y+ M+ A + + + + M GC D + ++ +
Sbjct: 415 ------NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 468
Query: 590 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
EH F++LLE G + + + + ++ + ++ AV L M + + L
Sbjct: 469 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 528
Query: 650 -----ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
+ N DR S LE++ N S I +S LC+ + RD
Sbjct: 529 KAMCKDGNVDR-SLVLLEEMAEKGIKPNNVSYNILISE-------LCKERRVRD 574
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/254 (18%), Positives = 111/254 (43%), Gaps = 17/254 (6%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+ + L + G + E + LI+ MR + PD+ YN ++
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCN---------------PDICSYNTIIYHLC 462
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ Q + +F+ L + G+ + TY + +L+ G++ ++M G ++ +
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+Y L++A ++G ++ ++ + M ++G+ Y L LC R +DA+ + +++
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
+ + P +T+ LI G + +++ + + ++ P+I T N ++ + + +
Sbjct: 583 LN-QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRL 641
Query: 505 FSKAKELFEETTRA 518
A L A
Sbjct: 642 LDDAAMLLNRAMAA 655
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 120/297 (40%), Gaps = 22/297 (7%)
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA-KSGEAIGALTYKVLVRAFWEEGK 399
R+ G++PS +Y + + V+ ++ + +R+M + T+ V RA G+
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+EA+A +R M + G V A +Y + LC+ G +A ++ ++ + + + TF
Sbjct: 191 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVN-TFD 249
Query: 460 GLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
++ G + + + + M C P + T +L+ R +A+ +
Sbjct: 250 DVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL 309
Query: 519 NSSGY-TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
N + T + G A K E T +Y+ M L GCQ D ++
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEAT------------------ELYETMGLKGCQPDAHTYSI 351
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L+ + G+ + + G P+ + +T +L ++ AL+ M+
Sbjct: 352 LMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 408
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 176/423 (41%), Gaps = 40/423 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M ++ G G ++A+ L ++
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ Y L+ L K GR EA ++F+ M + L P+I Y ++ G L
Sbjct: 300 VEPDV---VTYNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGAL 355
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M ++N + P+ V++ ++ A + VF ++
Sbjct: 356 VEMHGLLDLM-------VRNG--------IHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R+ GL P TYG + ++ +SG+ + +F +M + G + Y L+ + K
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEIT 457
++A + M RG+ + + C GR ++ EK+ L KP IT
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIIT 516
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
++ LI G +D+ + M +P+ T N ++ Y + A LF E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM- 575
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
SSG + PD TY+ +L+ + + +Y G+ SG QL+ + +
Sbjct: 576 --ESSG----------VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 577 WLL 579
+L
Sbjct: 624 IIL 626
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/489 (19%), Positives = 187/489 (38%), Gaps = 68/489 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M Q G + LLKGL D+
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A+ +L + D D V YT ++ K G +A ++ ML D + P++
Sbjct: 179 QEALELLQMMP--DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML-DRGILPNVV 235
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y S+ L + + + ++++ M +KN + P+ YN++++
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSM-------VKNG--------VMPNCRTYNSIVHGYC 280
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
S Q K K++ G++P TY M+ + ++G+ + F M K G
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY L++ + +G + E + M + G+ V+ L C G+ AMLV K+
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMF 505
+ + P +T+ +I G ++D + F+ M D
Sbjct: 401 RQ-QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--------------------- 438
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
L P Y+S++ + +W+ + + M
Sbjct: 439 --------------------------RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G LD ++ + G+ E FD ++ G P + ++ ++ + ++
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532
Query: 626 AVALINAMA 634
A L+ +M
Sbjct: 533 ATKLLASMV 541
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 65/419 (15%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K G+ +A+ +F+ M + L PD Y +V L + G
Sbjct: 370 IH-----PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIGILCKSG 423
Query: 279 LLKELVKLIERM---RQKPSKRIKN--MHR----KNWDP-------VLEPDLVVYNAVLN 322
+++ ++ E+M R P + N +H WD +L+ + + N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483
Query: 323 ACVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+ + SH +G +F + + G+KP TY ++ +GK D + M
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G +TY L+ + + ++ +A+ R ME GV Y + G +Q
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL-----QGLFQTR 598
Query: 439 MLVVEK---IKSLRHSKPLEITFTGLIISSMDGGHI-DDCISIFQHMKDHCEPNIG---- 490
K + LE++ +I+ + ++ D+ + +FQ++ C ++
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL---CLTDLQLETR 655
Query: 491 ----TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+ A+LKV RND +AK+LF LS +G L PD TYS M E
Sbjct: 656 TFNIMIGALLKV-GRND---EAKDLFAA-----------LSANG--LVPDVRTYSLMAE 697
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 120/296 (40%), Gaps = 19/296 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TYG+ + +G+ DL + K G
Sbjct: 64 VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+ + L++ + + ++A+ V R M Q G + Y L LC+ R Q+A+
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183
Query: 441 VVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
+++ + P + +++T +I G +D + M D PN+ T ++++
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ KA E+ + + P+ TY+S++ ++ Q +
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNG-------------VMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
K M G + D + L+ + G+C FDS+ + G P + +L
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 182/451 (40%), Gaps = 68/451 (15%)
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS--------- 295
+R+ L+D L +A +S+ + G +GL++EL+ + RM++ PS
Sbjct: 167 IRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVN 226
Query: 296 KRIKNMHRKNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ +M ++ + V E PD V YN ++ + + + F+ + +KP
Sbjct: 227 GLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKP 286
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY ++ +D + +M + G I +Y +++ ++ K EA A
Sbjct: 287 DKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVF 346
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M Q+G ++Y L NG ++AM + E++K+ +P +T++ L+
Sbjct: 347 ETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKN-EGFEPDAVTYSVLVNGLCK 405
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKV-----YSRNDMFSKAKELFEETTRANSSG 522
G +DD + +F D C +NAM + A+ LFEE + +
Sbjct: 406 SGRLDDGMELF----DFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCA- 460
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVE 581
D Y Y+++++A A + + ++ M GC DQT + + +L++
Sbjct: 461 ------------RDSYCYNAIIDALAKHGKIDQALALFGRMEEEGC--DQTVYTFTILID 506
Query: 582 ASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
K H E A D +++ G P F + I + +A +++ + AP
Sbjct: 507 G--LFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDL--APM 562
Query: 639 HITERQWTELFESNEDRISRDKLEKLLNALC 669
I I E ++N LC
Sbjct: 563 GI---------------IPETAFEDMINTLC 578
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/286 (17%), Positives = 116/286 (40%), Gaps = 20/286 (6%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++ L ++ + + MNQ G L+ GS +AM + + +
Sbjct: 328 LVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFER---M 384
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K++ Y+ L+ L K+GR + + +F+ + + + Y S+ LG+ G
Sbjct: 385 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDF-CRNKGVAINAMFYASLIDGLGKAGR 443
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+++ L E M +K R D YNA+++A + +F +
Sbjct: 444 IEDAENLFEEMSEKGCAR---------------DSYCYNAIIDALAKHGKIDQALALFGR 488
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + G + T+ + ++ + + K + +F+ KM G +++ L GK
Sbjct: 489 MEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGK 548
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+ A + ++ G++ + + ++ LC R ++A + + I
Sbjct: 549 VARACKILDDLAPMGII-PETAFEDMINTLCKAQRIKEACKLADGI 593
>gi|15222753|ref|NP_175959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75140283|sp|Q7X6A5.1|PPR81_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g55630
gi|30793841|gb|AAP40373.1| unknown protein [Arabidopsis thaliana]
gi|30794021|gb|AAP40457.1| unknown protein [Arabidopsis thaliana]
gi|110739296|dbj|BAF01561.1| hypothetical protein [Arabidopsis thaliana]
gi|332195155|gb|AEE33276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 155/402 (38%), Gaps = 70/402 (17%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+ A W G ++ R + Y L+ I + G R+ + M++D YP A
Sbjct: 133 KLAYKFFVWCGGQENFRHTAN--CYHLLMKIFAECGEYKAMCRLIDEMIKDG--YPTTAC 188
Query: 267 -YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
++ + T G+ GL +++V+ + ++ K N+ P YNA+L++ +
Sbjct: 189 TFNLLICTCGEAGLARDVVE--QFIKSKTF---------NYRPYKHS----YNAILHSLL 233
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
Q+K + WV++Q+ + G P TY + M + GK D ++ +M K G +
Sbjct: 234 GVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLY 293
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY +L+ K A+ + +M + GV
Sbjct: 294 TYNILLHHLATGNKPLAALNLLNHMREVGV------------------------------ 323
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDM 504
+P I FT LI G ++ C + +K C P++ M+ Y
Sbjct: 324 ------EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
KA+E+F+E T P+ +TY+SM+ A +++ + K M
Sbjct: 378 LEKAEEMFKEMTEKGQL-------------PNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
GC + ++ L+ AGK ++E G H
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVH 466
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 125/327 (38%), Gaps = 19/327 (5%)
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
A Y +L++ F E G+ + M + G TA + L C G +D +
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFI 211
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 502
K K+ + +P + ++ ++ S + +++ M +D P++ T N ++ R
Sbjct: 212 KSKTFNY-RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRL 270
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+ L +E + DG PD YTY+ +L AT ++ +
Sbjct: 271 GKTDRLYRLLDEMVK-----------DG--FSPDLYTYNILLHHLATGNKPLAALNLLNH 317
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M G + L+ SRAGK ++ D ++ G P + +T M+ I
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 623 YEKAVALINAM---AYAPFHITERQWTELF-ESNEDRISRDKLEKLLNALCNCNAASSEI 678
EKA + M P T F + + + + L+++ + CN N
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 679 TVSNLSRALHALCRSEKERDLSSSAHF 705
V+NL A L E +D+ H+
Sbjct: 438 LVNNLKNAGKVLEAHEVVKDMVEKGHY 464
>gi|222626074|gb|EEE60206.1| hypothetical protein OsJ_13175 [Oryza sativa Japonica Group]
Length = 789
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 137/343 (39%), Gaps = 36/343 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR +F M + PD A Y+ + G G KE+V+L +
Sbjct: 159 TYRVLLDLYGRQGRFDGVRELFREM--RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQD 216
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +H + +EPD+ V+ AC + V + G+ P+A
Sbjct: 217 M----------LHSE-----VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTA 261
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E + + Y+ + F M + G TY L AF + G EA A
Sbjct: 262 KAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSR 321
Query: 410 MEQRGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M + ++ L C + DA+ +++ R + P E + G++ +
Sbjct: 322 MTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFN-PDERSLEGVLNAYCIA 380
Query: 469 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTF 525
G ID+ F+ ++ P+I ML +Y+RND ++ A +L EE T RA+S+
Sbjct: 381 GVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVI 440
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
A + EY S W+ EYV L GC
Sbjct: 441 -----ASMIKGEYDDDS---------NWQMVEYVLDNSNLEGC 469
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 152/391 (38%), Gaps = 49/391 (12%)
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
L+ L MR PS P + PDL YN +L A + + + +
Sbjct: 33 LLGLFAEMRHDPS------------PSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLE 80
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
+G+ P A+Y ++ +G V E F +M+ +G Y L+ A G E
Sbjct: 81 AGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAE 140
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGL 461
AVA +R M+ G TA+ Y L GR+ V E + +R + P + T+ L
Sbjct: 141 AVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDG---VRELFREMRTTVPPDTATYNVL 197
Query: 462 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
DGG + + +FQ M EP+I T ++ R + A+E+ +
Sbjct: 198 FRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLD------- 250
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
+++ +G + P Y+ ++EA A +E + M G + L
Sbjct: 251 ----YITTEG--MVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNAL-- 302
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 640
A+ K L + A EA F+ M A +Q + + ALI AY
Sbjct: 303 -ANAFAKGGLFQEA-----EA-------IFSRMTNNAAIQKDKDSFDALIE--AYCQGAQ 347
Query: 641 TERQWTELFESNEDRISRDK--LEKLLNALC 669
+ E + R + D+ LE +LNA C
Sbjct: 348 LDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 378
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 115/303 (37%), Gaps = 25/303 (8%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSG----KYDLVHEFFRKM---AKSGEAIGALTYKVLVR 392
++ SG+ P+AATY + ++ +D++ F +M TY L+
Sbjct: 1 MKASGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLA 60
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
A +++ +R M + GV+ + Y + G + ++ + H+
Sbjct: 61 AAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHT- 119
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P + GL+ + G + +++ + M+ D C P T +L +Y R F +EL
Sbjct: 120 PDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVREL 179
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F E + PD TY+ + ++ +++ M S + D
Sbjct: 180 FREMRTT--------------VPPDTATYNVLFRVFGDGGFFKEVVELFQDMLHSEVEPD 225
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALI 630
++V R G D + G +P +T L++A+ + YE+A
Sbjct: 226 IDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTG-LVEALGHAAMYEEAYVAF 284
Query: 631 NAM 633
N M
Sbjct: 285 NMM 287
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/442 (19%), Positives = 178/442 (40%), Gaps = 76/442 (17%)
Query: 148 EKRWRSEAEAIRVL-VDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
++ W+ A RVL + R + A ++N F L++ + GS
Sbjct: 81 QRDWKVSQVAARVLALPRADPHAVDA-------VLNCWAGRFARRNFPLLIREMAFSGSL 133
Query: 207 RQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
A+ V W +K++ + +R +Y ++ + + + +A +F +++ PD
Sbjct: 134 EHAVYVFCW---MKNQENYCARNDIYGMMIQLHARHNQVDQARGLF-FEMQEWRCKPDAD 189
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+S+ + GL + + +++ M + + P YN V+NAC
Sbjct: 190 IYNSLINAHARAGLWRWAINIMDDMLRA---------------AIPPSRATYNNVVNACG 234
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ WK + K++ ++G+ P T+ + + +Y +F M + A
Sbjct: 235 AAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTF 294
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
T +++ + G+ +AV + +M ++ V
Sbjct: 295 TLNIVIHCLVKVGQHGDAVDLLNSMREKRV------------------------------ 324
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
P +T+T +I S G +++C ++F M + +PNI + NA+L Y+ + M
Sbjct: 325 ----QCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGM 380
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
++A +F+ L +G L+PD +Y+++L A + Q E V+ M
Sbjct: 381 HTEAFGIFK-----------LLKQNG--LRPDVVSYTTLLNAYGRSAQPEKAREVFNEMR 427
Query: 565 LSGCQLDQTKHAWLLVEASRAG 586
+ C+ ++ + L+ AG
Sbjct: 428 KNSCKPNKVSYNALIDAYGSAG 449
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 183/474 (38%), Gaps = 60/474 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F ++ L K G+ +A+ + N M E PD+ Y S+ + G ++ +
Sbjct: 294 FTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVF 353
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ M + K P++V YNA+L A F +FK L+++GL+P
Sbjct: 354 DMMVAEGVK---------------PNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRP 398
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+Y + +S + + E F +M K+ ++Y L+ A+ G EA++ +
Sbjct: 399 DVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLL 458
Query: 408 RNMEQRGV-VGTASVYYELACC-LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
ME+ G+ S+ LA C C D +L K + + + + + I S
Sbjct: 459 HEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNI---VAYNSGIGSY 515
Query: 466 MDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE--------TT 516
+ G + + ++ M + P+ T N ++ + ++++ + FE+ T
Sbjct: 516 LSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTK 575
Query: 517 RANSS---GY-----------TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
SS Y TF++ + PD TY++M++A W ++K
Sbjct: 576 EVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKE 635
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M + D A C L A + + G + L + + +Q N
Sbjct: 636 MEGNAILPD-------------AIICSSLMEALNKGNQYGRV---LQLMKFMHDQCIQLN 679
Query: 623 YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASS 676
+ +I + + T + E +S+ IS KL LLN L C S
Sbjct: 680 QKAYFEIIASCSMLRDWKTASEIIEHLDSSLPSISVGKLNYLLNFLGKCGKTES 733
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 139/331 (41%), Gaps = 35/331 (10%)
Query: 263 DIAAYHSVAVTL-----GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVY 317
D Y+ V TL + G + + KL + MR++ +E D+ VY
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG---------------IESDVHVY 332
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
++++ K F +F +L + GL PS+ TYG ++ + + G+ +M
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS 392
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
G I + + L+ + +G ++EA MEQ+G +A C R+ +
Sbjct: 393 KGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDE 452
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 496
A + ++ K +++T LI G++++ +F M +PN T N M+
Sbjct: 453 AKQWLFRMME-GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
Y + +A++L RAN + +G + PD YTY+S++ A +
Sbjct: 512 YAYCKQGKIKEARKL-----RAN------MEANG--MDPDSYTYTSLIHGECIADNVDEA 558
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
++ M L G + + ++ S+AGK
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/435 (19%), Positives = 179/435 (41%), Gaps = 36/435 (8%)
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
D G + + + V D++ D +S V+ L K R L IF M++
Sbjct: 166 DNGMFEEGLRVFDYMVKKGLSIDERSCIVF---LVAAKKRRRIDLCLEIFRRMVD----- 217
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR-IKNMHRKNWDPVLEPDLVVYNAV 320
V +T+ + ++ E L R + SK+ IK K ++P+ YN +
Sbjct: 218 ------SGVKITVYSLTIVVE--GLCRRGEVEKSKKLIKEFSVKG----IKPEAYTYNTI 265
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+NA V + GV V K ++K G+ + TY L ME+ +++GK + F +M + G
Sbjct: 266 INAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGI 325
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
Y L+ +G + A + ++G+ ++ Y L +C G A +
Sbjct: 326 ESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEI 385
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
++ +++S + ++ F LI G +D+ I+ M+ + ++ T N + +
Sbjct: 386 LMNEMQS-KGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
+R + +AK+ + F +G +K +Y+++++ E + +
Sbjct: 445 NRLKRYDEAKQ------------WLFRMMEGG-VKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
+ M+ G Q + + ++ + GK ++ G P +T ++ +
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 620 QSNYEKAVALINAMA 634
N ++A+ L + M
Sbjct: 552 ADNVDEAMRLFSEMG 566
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 71/177 (40%), Gaps = 16/177 (9%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
W++ + + S YT L+ + K G EA R+F + + + P+ Y+ +
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF-VEMSSKGVQPNAITYNVMIYAY 514
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G +KE KL M ++PD Y ++++ +
Sbjct: 515 CKQGKIKEARKLRANMEANG---------------MDPDSYTYTSLIHGECIADNVDEAM 559
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+F ++ GL ++ TY + + + ++GK D + +M + G I Y L+
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 165/393 (41%), Gaps = 40/393 (10%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+RF ++ L+A L KAGR EA+ +N MLE + P++ + + +L Q G + + + +
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLER-HCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GL 345
++ PS ++ N ++N +F ++ K+ L
Sbjct: 61 FRGIQCSPS------------------VITLNILINGFCELQLLDKALELFHEMEKNFAL 102
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P A TY ++ + + D + + + + A+T + R F + +++EA
Sbjct: 103 VPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITS--VARGFCKAQRVDEAYQ 160
Query: 406 AVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ +M ++ V + + C GR ++A ++E + S+ P +T+T LI
Sbjct: 161 LLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSM-GCVPNAVTYTTLIDG 219
Query: 465 SMDGGHIDDCISIFQHMKD---HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G++ + + +F+ + H EPN+ T NA++ + D A EL ++ +
Sbjct: 220 FCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD-- 277
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
L+ D +TY+++++ + V++ M GC + L+
Sbjct: 278 -----------LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHA 326
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+AG + S++ G P +T +L
Sbjct: 327 HCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 15/244 (6%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KAGR EA + ++ P+ Y ++ + G L E ++L + + +
Sbjct: 187 KAGRVREAYEMLETLVSM-GCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR------ 239
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
D EP++V +NA+++ + + + F + KQ++ L+ TY M+ +
Sbjct: 240 -------DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ G+ V F +M + G +TY LV A + G + +A +R+M +G+
Sbjct: 293 CKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
+ Y L L NG+ + A EKI R P + ++ L+ +D+ + +
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRER-CPPCAVVYSALVRGCCKAALVDEAVKYYV 411
Query: 480 HMKD 483
M D
Sbjct: 412 EMLD 415
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 38/267 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G R+A +L+ + + + + YT L+ K+G EAL++F ++
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGC---VPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP-------------------- 294
D + P++ ++++ L + L+ +L+++M+ +
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGR 297
Query: 295 ----SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
S+ + M R+ +P +V Y +++A + + V + + G+ P
Sbjct: 298 TSEVSRVFEEMLREGCNP----SVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + +E + ++GK EFF K+ + A+ Y LVR + ++EAV M
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413
Query: 411 EQRGVV---GTASVYYELACCLCNNGR 434
R + T + E+ LC GR
Sbjct: 414 LDRRLAPDPATCKLLVEM---LCKRGR 437
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G DKG A+ V D + G + + L+ K G+ HEA R+F+ M
Sbjct: 261 LISGYCDKGLLGLALKVRDLMMG--KNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEM- 317
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N+ P++ Y+++ GQ G + + L E M + K D++
Sbjct: 318 KLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVK---------------ADIL 362
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++ + K ++ K+L K L P+A+T+ + + +R M
Sbjct: 363 TYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSM 422
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+SG + T+++L AF + + AV +R+M +R + +S+ E+ LC GR
Sbjct: 423 VRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGRK 482
Query: 436 QDAMLVVEKIKSLR 449
Q A+++ +I++ R
Sbjct: 483 QFALMLCSEIEAKR 496
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 143/371 (38%), Gaps = 68/371 (18%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
F ++++ G P+ + + ML + +LV F+R+M ++ + T ++V A+
Sbjct: 172 TFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYC 231
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ G++N+A + M+ G+ + L C+ G A+ V + + P
Sbjct: 232 KLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNV 291
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+TF LI G + + +F MK + PN+ T N ++ + + LFEE
Sbjct: 292 VTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEE 351
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
R +K D TY+ G+ L C+ +TK
Sbjct: 352 MERNK-------------VKADILTYN--------------------GLILGLCKEGKTK 378
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM- 633
A +V+ G +P+ F+ ++ V++N E+A + +M
Sbjct: 379 KAAYMVKELDKGNL---------------VPNASTFSALIAGQCVRNNSERAFLVYRSMV 423
Query: 634 --AYAPFHITERQWTELFESNED-----RISRDKLEKLLNALCNCNAASSEITVSNLSRA 686
++P T R F NED ++ RD LE+ + S I LS
Sbjct: 424 RSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFM-------TPDSSI----LSEV 472
Query: 687 LHALCRSEKER 697
LCR +++
Sbjct: 473 YSGLCRCGRKQ 483
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 137/328 (41%), Gaps = 31/328 (9%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+D + F Y ++A + +AGR +A+ +F+ M E L P+ Y+++ + G
Sbjct: 55 RDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVL-PNHITYNTMIDGHIKGGD 113
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L+ +L ++M L+P+ + YN +L+ + + + +
Sbjct: 114 LEAGFRLRDQMVCHG---------------LKPNAITYNVLLSGLCRAGRMGETSALLDE 158
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + P TY + + + ++G + F K K+G IG T +L+ ++GK
Sbjct: 159 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGK 218
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
++ A ++++ G+V T +Y L C G + A ++KS RH KP IT+
Sbjct: 219 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS-RHIKPDHITYN 277
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI I + + M+D+ P + T N ++ Y R K + E
Sbjct: 278 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 337
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
LKP+ +Y S++ A
Sbjct: 338 G-------------LKPNVVSYGSIVNA 352
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 162/392 (41%), Gaps = 45/392 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G + ++LD + ++ + F Y+ L L + G L +F L
Sbjct: 139 LLSGLCRAGRMGETSALLDE---MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL 195
Query: 256 EDCNLYPDIAAYHSVAVTL------GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
++ D ++ ++ L G+V + +E+++ + P++ I N +
Sbjct: 196 KNGVTIGD----YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 251
Query: 310 -----------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
++PD + YNA++N + + + +++ +G+ P+ T+
Sbjct: 252 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 311
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++ ++G+ + +M ++G ++Y +V AF + GKI EAVA + +M
Sbjct: 312 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 371
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+ V+ A VY + +G A ++VEK+KS P +T+ LI + I
Sbjct: 372 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS-NGISPSIVTYNLLIKGLCNQSQIS 430
Query: 473 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ I + +H P+ + N ++ KA +L + R + G
Sbjct: 431 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ---RMHKYG--------- 478
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+K TY ++ A + EY+Y+ M
Sbjct: 479 -IKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 509
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 76/418 (18%), Positives = 156/418 (37%), Gaps = 32/418 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP-SAATYGLAMEVMLQSGKYDLVHE 370
PD +N + ACV + + +++ + G P +A +Y + + M ++G+ E
Sbjct: 25 PDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVE 84
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F +M + +TY ++ + G + M G+ A Y L LC
Sbjct: 85 VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 144
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNI 489
GR + +++++ S + P T++ L G +S+F +++K+
Sbjct: 145 RAGRMGETSALLDEMAS-QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD 203
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRAN-----------SSGY-----------TFLS 527
T + +L ++ S A+E+ + A +GY TF
Sbjct: 204 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 263
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+KPD TY++++ A + + + M +G L+ R G+
Sbjct: 264 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 323
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 647
+ E G P+ + + ++ +AVA+++ M + + +
Sbjct: 324 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 383
Query: 648 LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR----SEKERDLSS 701
+ ++ + D+ L+ + N S I NL + LC SE E ++S
Sbjct: 384 IIDAYVEHGPNDQAFILVEKM-KSNGISPSIVTYNL--LIKGLCNQSQISEAEEIINS 438
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 26/260 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L++ L + E + M +G+ T L+ G G + VL +
Sbjct: 279 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM---- 334
Query: 221 DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ LK V Y ++ K G+ EA+ I + M ++ P+ Y+++ + G
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGP 393
Query: 280 LKELVKLIERMRQK---PSKRIKNMHRK---NWDPVLE--------------PDLVVYNA 319
+ L+E+M+ PS N+ K N + E PD V YN
Sbjct: 394 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 453
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++AC + +++ K G+K + TY + + +G+ + + ++KM ++
Sbjct: 454 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 513
Query: 380 EAIGALTYKVLVRAFWEEGK 399
+ ++V A+ + G
Sbjct: 514 VVPSNAIHNIMVEAYSKYGN 533
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/425 (19%), Positives = 174/425 (40%), Gaps = 26/425 (6%)
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+R+K ++ ++ + + + PD + Y+ ++N + ++ + + ++ K G+ P
Sbjct: 9 VRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHN 68
Query: 350 ATYGLAMEVMLQSGKYD--LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
A Y ++ + +G+ D LVH +R M + A +TY +LV A + +I++A +
Sbjct: 69 AVYNTIIKGLCDNGRVDSALVH--YRDMQRHC-APSVITYTILVDALCKSARISDASLIL 125
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+M + G Y L C G +A+++ ++ P T+ LI
Sbjct: 126 EDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLE-NSCSPDVFTYNILIDGYCK 184
Query: 468 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
D + Q M K CEPN T N ++ ++ + A L + R +
Sbjct: 185 QERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC------ 238
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
KP +T++ M++ Q + +++ M GC D + ++ A RA
Sbjct: 239 -------KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 291
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
+ + + EAG P + + ++ S ++A + + + + +
Sbjct: 292 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 351
Query: 647 ELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFG 706
L + D EKLL + N ++ ++ + +H C++++ L S F
Sbjct: 352 TLIDGLCKSRRLDDAEKLLREM-ERNGSAPDVVAYTI--LIHGFCKADQ---LDKSLAFF 405
Query: 707 SQAID 711
S+ +D
Sbjct: 406 SEMLD 410
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 154/370 (41%), Gaps = 45/370 (12%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-----SRF 229
++ + M + G++ ++KGL D G A L RD++ S
Sbjct: 53 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA---------LVHYRDMQRHCAPSVI 103
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ L K+ R +A I M+E P++ Y+++ ++G + E V L +
Sbjct: 104 TYTILVDALCKSARISDASLILEDMIEA-GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQ 162
Query: 290 M---------------------RQKP---SKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
M +++P +K ++ M + EP+ + YN ++++ V
Sbjct: 163 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC----EPNFITYNTLMDSLV 218
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
S ++ F + + + + KPS T+ L +++ + G+ DL +E F+ M G
Sbjct: 219 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY 278
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY +++ +I++A + M + G Y + LC + +A V E +
Sbjct: 279 TYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 338
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
++ + + +T + LI +DD + + M ++ P++ ++ + + D
Sbjct: 339 RNGGYFLDV-VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 397
Query: 505 FSKAKELFEE 514
K+ F E
Sbjct: 398 LDKSLAFFSE 407
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 126/299 (42%), Gaps = 21/299 (7%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E + +L+D ++E K ++ M + G L+ L G +
Sbjct: 165 ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYI 224
Query: 208 QAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
A ++ + +RD K S F + ++ + K G+ A +F LM D PDI
Sbjct: 225 DAFNLAQMML----RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM-TDRGCLPDIYT 279
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+ + + + + +L+ERM + PD+V YN++++
Sbjct: 280 YNIMISGACRANRIDDARQLLERMTEAGCP---------------PDVVTYNSIVSGLCK 324
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ Q + V++ LR G T ++ + +S + D + R+M ++G A +
Sbjct: 325 ASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVA 384
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
Y +L+ F + ++++++A M +G V T Y + LC + R +D ++++ +
Sbjct: 385 YTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443
>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 376
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 18/283 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + + G + S A++ + M + +GK D V
Sbjct: 21 VSPDAVVYNAMLNGFFRVGRIKDCFELWEMMGREGSR-SVASFNIMMRGLFDNGKVDEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
M KSG ++TY +LV F + G IN+++ + E++G V A Y + L
Sbjct: 80 SILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEIAERKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
C + A+ V+ IKS KP + LI + +D + + + M +C P
Sbjct: 140 CKEAKLDKAVSVLNGMIKS--GCKPNAHVYNALINGLVGASKFEDAVRVVREMGTTNCSP 197
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
+ T + ++ + + F +A +L +E L P TYS +++
Sbjct: 198 TLVTYSTLINGLCKVERFGEAYDLVKEMLZKG-------------LNPSVITYSLLMKGL 244
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
H+ E + + G + D H L+ GK L
Sbjct: 245 CLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQL 287
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 137/365 (37%), Gaps = 39/365 (10%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V+K++ +S + P A Y + + G+ E + M + G A ++ +++R +
Sbjct: 12 VYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELWEMMGREGSRSVA-SFNIMMRGLF 70
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ GK++E ++ + M++ G + + Y L C NG ++ V+E + R L+
Sbjct: 71 DNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEIAE--RKGGVLD 128
Query: 456 -ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
++ +I +D +S+ M K C+PN NA++ F A +
Sbjct: 129 AFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKFEDAVRVVR 188
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
E N S P TYS+++ ++ + K M G
Sbjct: 189 EMGTTNCS-------------PTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVI 235
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI--- 630
++ L+ K + + + G P + +LI + + L+
Sbjct: 236 TYSLLMKGLCLGHKVEMALQLXNQVTSKGFKP-DVQMHNILIHGLCSVGKTQLALLLYLD 294
Query: 631 -NAMAYAPFHITERQWTELFESNED---------RISRDKLEK-------LLNALCNCNA 673
N AP +T E F ++D RI R+ L+ L LC+CN
Sbjct: 295 MNRWNCAPNLVTHNTLMEGFYKDDDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNR 354
Query: 674 ASSEI 678
S I
Sbjct: 355 ISDAI 359
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 106/246 (43%), Gaps = 19/246 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G + +S+L+ +K ++ Y L+ K G +++L + +
Sbjct: 65 MMRGLFDNGKVDEVISILEL---MKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEIA- 120
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E D AY ++ L + L + V ++ M + K P+
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCK---------------PNAH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYNA++N V + +++ V +++ + P+ TY + + + ++ ++ ++M
Sbjct: 166 VYNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEM 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +TY +L++ K+ A+ + +G ++ L LC+ G+
Sbjct: 226 LZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKT 285
Query: 436 QDAMLV 441
Q A+L+
Sbjct: 286 QLALLL 291
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 167/400 (41%), Gaps = 46/400 (11%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYT 232
W + +M G+ T L++ G +A+ + + YG K + ++
Sbjct: 163 WHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCK-----PDKVSFS 217
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+++ L K R EA F+ + PD+ Y S+ + G + + ++ M++
Sbjct: 218 IVISSLCKKRRASEAELFFDSLKH--KFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKE 275
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
K P++ Y+ V+++ Q VF ++ +G P+A T+
Sbjct: 276 AGVK---------------PNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTF 320
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
M V +++G+ + V + + +M + G A ++Y L+ + ++ ++EAV + M +
Sbjct: 321 NSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVK 380
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+GV AS + + C+ A + K+K L+ P +T+ L+ D ID
Sbjct: 381 KGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELK-CMPNTLTYNILMRMFADSKSID 439
Query: 473 DCISIFQHMKD-HCEPNIGTVNAMLKVYSR----NDMFSKAKELFEETTRANSSGYTFLS 527
+ + + M + EPN+ T ++ ++ N+ ++ KE+ EE
Sbjct: 440 MVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKC----------- 488
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
LKP+ Y ++LE A Q + E + + M G
Sbjct: 489 -----LKPNLSIYETVLELLRNAGQLKKHEELVEKMVARG 523
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 104/273 (38%), Gaps = 18/273 (6%)
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G S Y +++ + +DL M G I T+ VLVR + G EA
Sbjct: 138 GFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEA 197
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLI 462
V A ME G + + LC R +A L + SL+H +P I +T L+
Sbjct: 198 VHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFD---SLKHKFEPDVIVYTSLV 254
Query: 463 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G I +F MK+ +PN+ T + ++ R ++A ++F E A
Sbjct: 255 HGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCD 314
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
P+ T++S++ A + E VY M GC D + +L+
Sbjct: 315 -------------PNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIES 361
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ D++++ G P+ F +
Sbjct: 362 HCKDENLDEAVKVLDTMVKKGVAPNASTFNSIF 394
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 52/329 (15%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKRIKNMHR 303
A IF ML L PD A Y+ + ++G + + ++E+M R +PS R
Sbjct: 493 AFAIFEEMLRS-GLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA----- 546
Query: 304 KNWDPVLE------------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ P++E P ++ YNA+++ V H+ + V +
Sbjct: 547 --FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDK 604
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ +G+ P+ TY + M SG E+F K+ +SG + Y+ L+RA + G+
Sbjct: 605 MSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 664
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TF 458
+ A+A R M + + +Y L G +A +++++K P I T+
Sbjct: 665 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKE--DGVPPNIHTY 722
Query: 459 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
T I + G + + + M D +PN+ T ++K ++R + +A + FEE
Sbjct: 723 TSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKL 782
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
A LKPDE +Y ++ +
Sbjct: 783 AG-------------LKPDEASYHCLVTS 798
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 22/306 (7%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VY+++++ VF++L++ G KPS +YG + + ++ GK ++M
Sbjct: 406 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM 465
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G TY +L+ F A A M + G+ ++Y L C G
Sbjct: 466 ESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNM 525
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ ++EK++ R +P F +I G + + M + C P + T NA
Sbjct: 526 DRAICILEKMQKERM-QPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNA 584
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-SATAHQW 553
++ R +A + ++ + A + P+E+TY+ ++ +A+
Sbjct: 585 LIHGLVRKHKVQRAVSVLDKMSIAG-------------ITPNEHTYTIIMRGYAASGDIG 631
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG--EIPHPLFFT 611
+ FEY K + SG +LD + LL ++G+ ++ A E +IP F
Sbjct: 632 KAFEYFTK-IKESGLKLDVYIYETLLRACCKSGR---MQSALAVTREMSFQKIPRNTFIY 687
Query: 612 EMLIQA 617
+LI
Sbjct: 688 NILIDG 693
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 158/411 (38%), Gaps = 49/411 (11%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L++C P I +Y + ++G + + + + + M S IK+ ++
Sbjct: 430 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEME---SCGIKHNNK----------- 475
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y+ ++N + H + F +F+++ +SGL+P A Y L +E + G D K
Sbjct: 476 -TYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 534
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K ++ ++ + G + A+ + M + G V T Y L L +
Sbjct: 535 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHK 594
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
Q A+ V++K+ S+ P E T+T ++ G I F +K+ + ++
Sbjct: 595 VQRAVSVLDKM-SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYE 653
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG------------------------D 529
+L+ ++ A + E + TF+ D
Sbjct: 654 TLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED 713
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
G P P+ +TY+S + A A + E V + M G + + + L+ +R
Sbjct: 714 GVP--PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPD 771
Query: 590 LLEHAFDSLLEAG----EIPHPLFFTEMLIQAIVQ--SNYEKAVALINAMA 634
F+ + AG E + T +L +A V S Y +++ M+
Sbjct: 772 RALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMS 822
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/338 (17%), Positives = 137/338 (40%), Gaps = 15/338 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+EP+ V+ ++++A + +G ++++ GL+ + TY + + +
Sbjct: 295 IEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSAD 354
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F++ ++ + Y ++ A + G + A VR ME+ G+ VY+ +
Sbjct: 355 NLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGY 414
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
++V E++K KP I++ L+ + G + +SI + M+ + N
Sbjct: 415 TIIQNENKCLVVFERLKECGF-KPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHN 473
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T + ++ + F+ A +FEE R+ L+PD Y+ ++EA
Sbjct: 474 NKTYSMLINGFIHLHDFANAFAIFEEMLRSG-------------LQPDRAIYNLLIEAFC 520
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + + M Q ++ + AG D + +G +P +
Sbjct: 521 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVM 580
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
+ ++ + + ++AV++++ M+ A E +T
Sbjct: 581 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYT 618
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 52/329 (15%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKRIKNMHR 303
A IF ML L PD A Y+ + ++G + + ++E+M R +PS R
Sbjct: 492 AFAIFEEMLRS-GLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA----- 545
Query: 304 KNWDPVLE------------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ P++E P ++ YNA+++ V H+ + V +
Sbjct: 546 --FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDK 603
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ +G+ P+ TY + M SG E+F K+ +SG + Y+ L+RA + G+
Sbjct: 604 MSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 663
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TF 458
+ A+A R M + + +Y L G +A +++++K P I T+
Sbjct: 664 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKE--DGVPPNIHTY 721
Query: 459 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
T I + G + + + M D +PN+ T ++K ++R + +A + FEE
Sbjct: 722 TSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKL 781
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
A LKPDE +Y ++ +
Sbjct: 782 AG-------------LKPDEASYHCLVTS 797
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 22/306 (7%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VY+++++ VF++L++ G KPS +YG + + ++ GK ++M
Sbjct: 405 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM 464
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G TY +L+ F A A M + G+ ++Y L C G
Sbjct: 465 ESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNM 524
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ ++EK++ R +P F +I G + + M + C P + T NA
Sbjct: 525 DRAICILEKMQKERM-QPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNA 583
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-SATAHQW 553
++ R +A + ++ + A + P+E+TY+ ++ +A+
Sbjct: 584 LIHGLVRKHKVQRAVSVLDKMSIAG-------------ITPNEHTYTIIMRGYAASGDIG 630
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG--EIPHPLFFT 611
+ FEY K + SG +LD + LL ++G+ ++ A E +IP F
Sbjct: 631 KAFEYFTK-IKESGLKLDVYIYETLLRACCKSGR---MQSALAVTREMSFQKIPRNTFIY 686
Query: 612 EMLIQA 617
+LI
Sbjct: 687 NILIDG 692
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 158/411 (38%), Gaps = 49/411 (11%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L++C P I +Y + ++G + + + + + M S IK+ ++
Sbjct: 429 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEME---SCGIKHNNK----------- 474
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y+ ++N + H + F +F+++ +SGL+P A Y L +E + G D K
Sbjct: 475 -TYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 533
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M K ++ ++ + G + A+ + M + G V T Y L L +
Sbjct: 534 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHK 593
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
Q A+ V++K+ S+ P E T+T ++ G I F +K+ + ++
Sbjct: 594 VQRAVSVLDKM-SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYE 652
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG------------------------D 529
+L+ ++ A + E + TF+ D
Sbjct: 653 TLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED 712
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
G P P+ +TY+S + A A + E V + M G + + + L+ +R
Sbjct: 713 GVP--PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPD 770
Query: 590 LLEHAFDSLLEAG----EIPHPLFFTEMLIQAIVQ--SNYEKAVALINAMA 634
F+ + AG E + T +L +A V S Y +++ M+
Sbjct: 771 RALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMS 821
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/338 (17%), Positives = 136/338 (40%), Gaps = 15/338 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+EP+ V+ ++++A + +G ++++ GL+ + TY + + +
Sbjct: 294 IEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSAD 353
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F++ ++ + Y ++ A + G + A V ME+ G+ VY+ +
Sbjct: 354 NLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGY 413
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
++V E++K KP I++ L+ + G + +SI + M+ + N
Sbjct: 414 TIIQNENKCLVVFERLKECGF-KPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHN 472
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T + ++ + F+ A +FEE R+ L+PD Y+ ++EA
Sbjct: 473 NKTYSMLINGFIHLHDFANAFAIFEEMLRSG-------------LQPDRAIYNLLIEAFC 519
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + + M Q ++ + AG D + +G +P +
Sbjct: 520 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVM 579
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 646
+ ++ + + ++AV++++ M+ A E +T
Sbjct: 580 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYT 617
>gi|357436523|ref|XP_003588537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477585|gb|AES58788.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 653
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 169/389 (43%), Gaps = 23/389 (5%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
TKLL IL G+P A IF ++E+ + P + Y S+ L K + L+ ++
Sbjct: 78 TKLLNILIVCGKPQAANVIFKKLIEEGH-QPSLITYTSLLHALTMQKCFKSIHSLVSQVE 136
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+K ++ + + YNAV+NA S + +++++SG +PS T
Sbjct: 137 EKQ---------------MKTNSIFYNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGT 181
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL-TYKVLVRAFWEEGKINEAVAAVRNM 410
Y ++ GK + M G + L TY +L++A + G ++EA V M
Sbjct: 182 YSNLIKGYGIVGKSGEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKM 241
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
G++ + + +A N +A ++ +++ + +P E TFT ++ G
Sbjct: 242 PASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQR-KGLEPNERTFTVIVNGYYKEGQ 300
Query: 471 IDDCISIFQHMKD-HCEPNIGTVNAMLKVY----SRNDMFSKAKELFEETTRANSSGYTF 525
I + + +KD +PN+ N ++ + R+ + + +E ++
Sbjct: 301 IKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEFSNTFAQEGKNQVTTPLVL 360
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
++PD TYS+++ A + A + + ++ M SG + D ++ L+ R+
Sbjct: 361 RLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRS 420
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ E ++E+G P+ + FT ++
Sbjct: 421 METEKAEELLGDMIESGVRPNVVTFTNVI 449
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 156/407 (38%), Gaps = 83/407 (20%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK+ ++ + +++ +E K V+ M +SG + G L+KG G G
Sbjct: 137 EKQMKTNSIFYNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSG 196
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+AM +LD + L D Y L+ L ++G EA I M + PD +
Sbjct: 197 EAMKLLDLM--LTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPAS-GMLPDSVTF 253
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQK---PSKR----IKNMHRKNW-------------D 307
+++A+ E +I M++K P++R I N + K D
Sbjct: 254 NTMAIGYVLNSETAEAEAMILEMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKD 313
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGV-----------------FWVFKQLRKSGLKPSAA 350
+P+L+V+N ++N V GV V + +++ ++P
Sbjct: 314 LGFKPNLLVFNVLINGFVDRMDRDGVDEFSNTFAQEGKNQVTTPLVLRLMKEFQIQPDVV 373
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY M Q+G D + F M +SG Y +LV+ + + +A + +M
Sbjct: 374 TYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRSMETEKAEELLGDM 433
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ GV +P +TFT +I G
Sbjct: 434 IESGV------------------------------------RPNVVTFTNVISGWGSSGR 457
Query: 471 IDDCISIFQHMKDHCE----PNIGTVNAMLKVYSRNDMFSKAKELFE 513
+D+ I IF M CE PN+ T A++ Y++ D K++E+ +
Sbjct: 458 MDNAIKIFDKM---CELGVSPNLRTFEALIWGYAKADQPWKSEEILQ 501
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 35/310 (11%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
RP A+R F + + D+ ++S LL LVK R K + ++ +
Sbjct: 155 RPDHAVRFFLSLHRSHGVAQDLPLFNS---------LLDALVK--SRHAGKAASLVRALE 203
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
R+ PD V YN + + + +Q+ +SG+ P+ TY + ++ +S
Sbjct: 204 RR-----FPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRS 258
Query: 363 GKYDLVHEFFRKMAKSGE-----AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
G+ +FF +M K G ++Y ++ G++++A M + G
Sbjct: 259 GQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTP 318
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
+ + Y L C G +DA+ V + + + P +T+T LI G ID + +
Sbjct: 319 SIATYNALIQVTCKKGNVEDAVAVFDDMIR-KGYIPNVVTYTVLIRGLCHAGKIDRAMKL 377
Query: 478 FQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
MK + CEPN+ T N ++ KA LFE ++ G P+
Sbjct: 378 LDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSK------------GEECLPN 425
Query: 537 EYTYSSMLEA 546
+ TY+ ++ A
Sbjct: 426 QDTYNIIISA 435
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
R + D +PD+V Y VL+ + Q VF ++ + G PS ATY ++V +
Sbjct: 274 RGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKK 333
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G + F M + G +TY VL+R GKI+ A+ + M++ G Y
Sbjct: 334 GNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTY 393
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
L L G + A+ + E + P + T+ +IIS+M
Sbjct: 394 NVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTY-NIIISAM 436
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 99/265 (37%), Gaps = 49/265 (18%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+R+ +A L D + T++ +R M +SG+ T+ +LKG G +
Sbjct: 203 ERRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQ 262
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A W + L+ K K G D N PD+ +Y
Sbjct: 263 HA-----WDFFLQMK-----------------KRGS------------NDENCKPDVVSY 288
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+V LG G L + K+ + M ++ P + YNA++
Sbjct: 289 TTVLHGLGVAGQLDKARKVFDEMSREGC---------------TPSIATYNALIQVTCKK 333
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ VF + + G P+ TY + + + +GK D + KM + G TY
Sbjct: 334 GNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTY 393
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQ 412
VL+ +EEG I +A+ M +
Sbjct: 394 NVLIGYLFEEGDIEKALHLFETMSK 418
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 479 QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
Q ++ P T N +LK + R+ A + F + + S+ KPD
Sbjct: 235 QMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDEN--------CKPDVV 286
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
+Y+++L A Q + V+ M+ GC + L+ + G FD +
Sbjct: 287 SYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDM 346
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAM 633
+ G IP+ + +T +LI+ + + ++A+ L++ M
Sbjct: 347 IRKGYIPNVVTYT-VLIRGLCHAGKIDRAMKLLDKM 381
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 126/313 (40%), Gaps = 24/313 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++ + +Y+ +++ K VFK+L++ G P+ TYG + + + GK
Sbjct: 443 IDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKAL 502
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E R M + G TY +++ F + A A +M + G+ +Y +
Sbjct: 503 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 562
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C G A+ V++++ LRH +P TF +I G + + +F M+ C P
Sbjct: 563 CGMGNMDRAIQTVKEMQKLRH-RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT 621
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T N ++ KA E+ +E T A S +E+TY+ +++ A
Sbjct: 622 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA-------------NEHTYTKIMQGYA 668
Query: 549 ----TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
T +EYF + G +D + LL ++G+ A + A I
Sbjct: 669 SVGDTGKAFEYFTRLQN----EGLDVDIFTYEALLKACCKSGRMQ-SALAVTKEMSARNI 723
Query: 605 PHPLFFTEMLIQA 617
P F +LI
Sbjct: 724 PRNSFVYNILIDG 736
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 157/364 (43%), Gaps = 48/364 (13%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK---ELVKLIERMRQKPSKR----IK 299
A +F M+++ + PD+ Y+++ +G + + VK ++++R +P+ R I
Sbjct: 536 AFAVFEDMVKE-GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 594
Query: 300 NMHRKNWD-----PVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ + K+ D V + P + +N ++N V Q + + ++ +G+
Sbjct: 595 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 654
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
+ TY M+ G E+F ++ G + TY+ L++A + G++ A+A
Sbjct: 655 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 714
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M R + + VY L G +A +++++K KP T+T I +
Sbjct: 715 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK-EGVKPDIHTYTSFISACS 773
Query: 467 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G ++ + M+ +PNI T ++K ++R + KA +EE
Sbjct: 774 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM---------- 823
Query: 526 LSGDGAPLKPDEYTY----SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
+KPD+ Y +S+L ++ A Y+Y G+ ++ C+ + A L+V+
Sbjct: 824 ---KAMGIKPDKAVYHCLLTSLLSRASIAEA-----YIYSGV-MTICK--EMVEAGLIVD 872
Query: 582 ASRA 585
A
Sbjct: 873 MGTA 876
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/343 (16%), Positives = 139/343 (40%), Gaps = 15/343 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P +Y ++++A +++++ G++ S TY + + ++G +
Sbjct: 338 ITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAAD 397
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+F + + + + A Y ++ A + + A A VR ME+ G+ ++Y+ +
Sbjct: 398 YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY 457
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ ++V +++K + P +T+ LI G I + + + MK+ + N
Sbjct: 458 TMVADEKKGLVVFKRLKECGFT-PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHN 516
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T + M+ + + ++ A +FE+ + +KPD Y++++ A
Sbjct: 517 LKTYSMMINGFVKLKDWANAFAVFEDMVKEG-------------MKPDVILYNNIISAFC 563
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ K M + ++ +++G FD + G +P
Sbjct: 564 GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVH 623
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
F ++ + + EKAV +++ M A E +T++ +
Sbjct: 624 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 666
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 52/329 (15%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKRIKNMHR 303
A IF ML L PD A Y+ + ++G + + ++E+M R +PS R
Sbjct: 497 AFAIFEEMLRS-GLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA----- 550
Query: 304 KNWDPVLE------------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ P++E P ++ YNA+++ V H+ + V +
Sbjct: 551 --FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDK 608
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ +G+ P+ TY + M SG E+F K+ +SG + Y+ L+RA + G+
Sbjct: 609 MSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 668
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TF 458
+ A+A R M + + +Y L G +A +++++K P I T+
Sbjct: 669 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKE--DGVPPNIHTY 726
Query: 459 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
T I + G + + + M D +PN+ T ++K ++R + +A + FEE
Sbjct: 727 TSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKL 786
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
A LKPDE +Y ++ +
Sbjct: 787 AG-------------LKPDEASYHCLVTS 802
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 173/442 (39%), Gaps = 49/442 (11%)
Query: 207 RQAMSVLDWVYGLKDKRDL--KSRFVYTKLLAILGKAGRPHEALRIFNLMLE---DCNLY 261
+Q++ VLD Y K+ L SR + ++ K G H A F M + N +
Sbjct: 274 KQSLDVLDLTYPFLFKKLLHEPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAF 333
Query: 262 PDIAAYHSVAVTLGQVG----------------------LLKELVKLIERMRQKPSKRIK 299
+ H+ AV G L+ K+ + + +R +
Sbjct: 334 VFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAE 393
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ R+ + ++ + VY+++++ VF++L++ G KPS +YG + +
Sbjct: 394 ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLY 453
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++ GK ++M G TY +L+ F A A M + G+
Sbjct: 454 VKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDR 513
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
++Y L C G A+ ++EK++ R +P F +I G + +
Sbjct: 514 AIYNLLIEAFCKMGNMDRAICILEKMQKERM-QPSNRAFRPIIEGYAVAGDMKSALDTLD 572
Query: 480 HM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M + C P + T NA++ R +A + ++ + A + P+E+
Sbjct: 573 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG-------------ITPNEH 619
Query: 539 TYSSMLEA-SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
TY+ ++ +A+ + FEY K + SG +LD + LL ++G+ ++ A
Sbjct: 620 TYTIIMRGYAASGDIGKAFEYFTK-IKESGLKLDVYIYETLLRACCKSGR---MQSALAV 675
Query: 598 LLEAG--EIPHPLFFTEMLIQA 617
E +IP F +LI
Sbjct: 676 TREMSFQKIPRNTFIYNILIDG 697
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 137/343 (39%), Gaps = 36/343 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR +F M + PD A Y+ + G G KE+V+L +
Sbjct: 353 TYRVLLDLYGRQGRFDGVRELFREM--RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQD 410
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +H + +EPD+ V+ AC + V + G+ P+A
Sbjct: 411 M----------LHSE-----VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTA 455
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E + + Y+ + F M + G TY L AF + G EA A
Sbjct: 456 KAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSR 515
Query: 410 MEQRGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M + ++ L C + DA+ +++ R + P E + G++ +
Sbjct: 516 MTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFN-PDERSLEGVLNAYCIA 574
Query: 469 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTF 525
G ID+ F+ ++ P+I ML +Y+RND ++ A +L EE T RA+S+
Sbjct: 575 GVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVI 634
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
A + EY S W+ EYV L GC
Sbjct: 635 -----ASMIKGEYDDDS---------NWQMVEYVLDNSNLEGC 663
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 175/454 (38%), Gaps = 58/454 (12%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG----LLK 281
++ YT L+A + EA + + M + + P A Y++V +
Sbjct: 167 RTALSYTSLIAAYARNALHEEARELLDQM-KASGVAPTAATYNTVLAACARATDPPVPFD 225
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
L+ L MR PS P + PDL YN +L A + + +
Sbjct: 226 MLLGLFAEMRHDPS------------PSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTML 273
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
++G+ P A+Y ++ +G V E F +M+ +G Y L+ A G
Sbjct: 274 EAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATA 333
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTG 460
EAVA +R M+ G TA+ Y L GR+ V E + +R + P + T+
Sbjct: 334 EAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDG---VRELFREMRTTVPPDTATYNV 390
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L DGG + + +FQ M EP+I T ++ R + A+E+ +
Sbjct: 391 LFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLD------ 444
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+++ +G + P Y+ ++EA A +E + M G +
Sbjct: 445 -----YITTEG--MVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIG--------SLPT 489
Query: 580 VEASRAGKCHLLEHAF--DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 637
+E A L +AF L + E F+ M A +Q + + ALI AY
Sbjct: 490 IETYNA-----LANAFAKGGLFQEAEA----IFSRMTNNAAIQKDKDSFDALIE--AYCQ 538
Query: 638 FHITERQWTELFESNEDRISRDK--LEKLLNALC 669
+ E + R + D+ LE +LNA C
Sbjct: 539 GAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 572
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 176/423 (41%), Gaps = 40/423 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M ++ G G ++A+ L ++
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ Y L+ L K GR EA ++F+ M + L P+I Y ++ G L
Sbjct: 300 VEPDV---VTYNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGAL 355
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M ++N + P+ V++ ++ A + VF ++
Sbjct: 356 VEMHGLLDLM-------VRNG--------IHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R+ GL P TYG + ++ +SG+ + +F +M + G + Y L+ + K
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEIT 457
++A + M RG+ + + C GR ++ EK+ L KP IT
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIIT 516
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
++ LI G +D+ + M +P+ T N ++ Y + A LF E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM- 575
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
SSG + PD TY+ +L+ + + +Y G+ SG QL+ + +
Sbjct: 576 --ESSG----------VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 577 WLL 579
+L
Sbjct: 624 IIL 626
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/489 (19%), Positives = 187/489 (38%), Gaps = 68/489 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M Q G + LLKGL D+
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A+ +L + D D V YT ++ K G +A ++ ML D + P++
Sbjct: 179 QEALELLQMMP--DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML-DRGILPNVV 235
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y S+ L + + + ++++ M +KN + P+ YN++++
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSM-------VKNG--------VMPNCRTYNSIVHGYC 280
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
S Q K K++ G++P TY M+ + ++G+ + F M K G
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY L++ + +G + E + M + G+ V+ L C G+ AMLV K+
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMF 505
+ + P +T+ +I G ++D + F+ M D
Sbjct: 401 RQ-QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--------------------- 438
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
L P Y+S++ + +W+ + + M
Sbjct: 439 --------------------------RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G LD ++ + G+ E FD ++ G P + ++ ++ + ++
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532
Query: 626 AVALINAMA 634
A L+ +M
Sbjct: 533 ATKLLASMV 541
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 171/416 (41%), Gaps = 59/416 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K G+ +A+ +F+ M + L PD Y +V L + G
Sbjct: 370 IH-----PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIGILCKSG 423
Query: 279 LLKELVKLIERM---RQKPSKRIKN--MHR----KNWDP-------VLEPDLVVYNAVLN 322
+++ ++ E+M R P + N +H WD +L+ + + N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483
Query: 323 ACVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+ + SH +G +F + + G+KP TY ++ +GK D + M
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G +TY L+ + + ++ +A+ R ME GV Y + L R A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI-DDCISIFQHMKDHCEPNIG------- 490
+ I LE++ +I+ + ++ D+ + +FQ++ C ++
Sbjct: 604 KELYVGIT--ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL---CLTDLQLETRTFN 658
Query: 491 -TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+ A+LKV RND +AK+LF LS +G L PD TYS M E
Sbjct: 659 IMIGALLKV-GRND---EAKDLFAA-----------LSANG--LVPDVRTYSLMAE 697
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 120/296 (40%), Gaps = 19/296 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TYG+ + +G+ DL + K G
Sbjct: 64 VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+ + L++ + + ++A+ V R M Q G + Y L LC+ R Q+A+
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183
Query: 441 VVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
+++ + P + +++T +I G +D + M D PN+ T ++++
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ KA E+ + + P+ TY+S++ ++ Q +
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNG-------------VMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
K M G + D + L+ + G+C FDS+ + G P + +L
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 194/496 (39%), Gaps = 79/496 (15%)
Query: 179 RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW-VYGLKDKRDLKSRFVYTKLLAI 237
+I+ + G+ + KLL GL G W L W +YG + ++ VYT L I
Sbjct: 211 QILRRKGVSVSINACNKLLGGLVRTG-WVD----LAWEIYGEVVRGGIELN-VYT--LNI 262
Query: 238 LGKA---GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ A R E + F +E ++ DI Y+++ + GL++E +L+ +
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+EP L+ YNA+L ++ V ++ + GL P+AATY
Sbjct: 323 ---------------MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + + E F +M++ G +++ L+ G + +A+ R ME+ G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427
Query: 415 VVGTASVYYELACCLCNNGRWQDA------------------------------------ 438
+V +Y L C NG DA
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
ML E ++ R P TFT LI G++D +++F+ M + + +P+ T N ++
Sbjct: 488 MLFNEMVE--RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
+ + +AKEL+++ R + + PD +Y ++L ++
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKD-------------IIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+ M G + + L+ R+G ++ G IP + ++
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652
Query: 618 IVQSNYEKAVALINAM 633
+ ++N EKA LIN M
Sbjct: 653 LKEANLEKAFILINEM 668
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 136/343 (39%), Gaps = 24/343 (6%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
++Y+ ++ V + + + F+ LR+ G+ S + ++++G DL E + +
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ + G + T ++V A ++ K + + +ME +GV Y L C G
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
++A ++ S R +P +T+ ++ G D + M + PN T N
Sbjct: 308 VEEAFQLLNSFSS-RGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 494 AMLKVYSRNDMFSKAKELFEETTR--------ANSSGYTFLSGDG--------------A 531
+L R D +A+E+F+E +R + SS L+ +G +
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
+ PD Y+ +++ + M GC +D + L +
Sbjct: 427 GIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADA 486
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ F+ ++E G +P FT ++ N +KA+ L AM
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 36/250 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVK 285
+ +T L+ K G +AL +F M+ NL PD Y+++ G++G KEL
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRT-NLKPDKVTYNTLIDGFCKAGEMGRAKEL-- 559
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
WD ++ PD + Y VLN S + Q+
Sbjct: 560 --------------------WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQML 599
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
+ G++P+ T ++ +SG +E+ KM +G + +Y L+ + +E +
Sbjct: 600 EKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+A + ME+RG+ Y + C G+ Q+A E++ LR + I G
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEA----EQV--LRKMIEIGINPDGA 713
Query: 462 IISSMDGGHI 471
SS+ GH+
Sbjct: 714 TYSSLINGHV 723
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/396 (17%), Positives = 145/396 (36%), Gaps = 64/396 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
++ L+ +L + G ++AL F M E + PD Y + + G L + +K+ + M
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ D+V YN LN + +F ++ + G+ P
Sbjct: 459 LARGCFM---------------DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + + G D F M ++ +TY L+ F + G++ A +M
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
++ ++ Y + C++G +A+ + +
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCD--------------------------- 596
Query: 471 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
Q ++ PN+ T N ++K Y R+ KA +E ++ S+G
Sbjct: 597 --------QMLEKGIRPNLVTCNTLIKGYCRSGDMPKA---YEYLSKMISNG-------- 637
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ PD ++Y+++++ E + M G Q + + +L GK
Sbjct: 638 --IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE 695
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
E ++E G P ++ ++ + Q N ++A
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 24/276 (8%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L +++M A M + G++ L++G G+ +A+++ + +
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K D + Y L+ KAG A +++ M+ ++ PD +Y +V GLL
Sbjct: 533 LKPD---KVTYNTLIDGFCKAGEMGRAKELWDDMIRK-DIIPDHISYGTVLNGFCSSGLL 588
Query: 281 KELVKLIERMRQKP--------SKRIKNMHRKNWDPV------------LEPDLVVYNAV 320
E + L ++M +K + IK R P + PD YN +
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
++ + + F + ++ K GL+ + TY L + GK + RKM + G
Sbjct: 649 IDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGI 708
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
TY L+ + + EA M QRG+V
Sbjct: 709 NPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 181/467 (38%), Gaps = 62/467 (13%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
FT G + L LG +A L + G+ + +Y ++ L G EA
Sbjct: 160 FTFGVAARALCRLG------RADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA 213
Query: 248 LRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
+ N ++L C D+ + V + +G ++E +L++RM K
Sbjct: 214 ATLLNEMLLMGCAA--DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCM---------- 261
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
P ++ Y +L Q + ++ + + + + L GK
Sbjct: 262 -----PGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLA 312
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
E + M G A TY +L+ + G+I AV +R ME++G Y +
Sbjct: 313 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 372
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT---FTGLIISSMDGGHIDDCISIFQHMKD 483
C NG W D ++E++ + K L + + G+I + G +D+ + + Q M+
Sbjct: 373 HSFCKNGMWDDTRALLEEMSA----KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 428
Query: 484 H-CEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYTFLSGDGAPLKPDEY 538
C P+I + N ++ N+ +A+ +FE E AN
Sbjct: 429 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG-----------------I 471
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH----LLEHA 594
TY++++ A +W+ + K M L GC LD + L+ + G LLE
Sbjct: 472 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 531
Query: 595 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
+ ++ + + + +E+ + V+ E + ++N AP +T
Sbjct: 532 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLN-QGLAPDIVT 577
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 127/308 (41%), Gaps = 35/308 (11%)
Query: 242 GRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G+ EA ++ M L+ C PD Y + L ++G + V+L+ M +K
Sbjct: 309 GKLAEATELYETMGLKGCQ--PDAHTYSILMHGLCKLGRIGSAVRLLREMEKK------- 359
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
P++V Y VL++ + W + +++ GL ++ Y + +
Sbjct: 360 --------GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 411
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ G+ D ++M G +Y ++ ++ EA N+ + GVV
Sbjct: 412 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 471
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQ 479
Y + L +GRWQDA+ + +++ + H L+ +++ GLI + G++D + + +
Sbjct: 472 TYNTIIHALLRDGRWQDAVRLAKEM--ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 529
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M + +PN + N ++ + A EL ++ L PD
Sbjct: 530 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG-------------LAPDIV 576
Query: 539 TYSSMLEA 546
TY++++
Sbjct: 577 TYNTLING 584
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/254 (18%), Positives = 111/254 (43%), Gaps = 17/254 (6%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+ + L + G + E + LI+ MR + PD+ YN ++
Sbjct: 402 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCN---------------PDICSYNTIIYHLC 446
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ Q + +F+ L + G+ + TY + +L+ G++ ++M G ++ +
Sbjct: 447 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 506
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+Y L++A ++G ++ ++ + M ++G+ Y L LC R +DA+ + +++
Sbjct: 507 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 566
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 504
+ + P +T+ LI G + +++ + + ++ P+I T N ++ + + +
Sbjct: 567 LN-QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRL 625
Query: 505 FSKAKELFEETTRA 518
A L A
Sbjct: 626 LDDAAMLLNRAMAA 639
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/428 (18%), Positives = 164/428 (38%), Gaps = 75/428 (17%)
Query: 334 FWVFKQL-RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
F +++++ + + P+ T+G+A + + G+ D R MA+ G A+ Y+ ++
Sbjct: 143 FALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIH 202
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
A ++G + EA + M G + + ++ +C GR ++A +V+++ + +
Sbjct: 203 ALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMT-KGCM 261
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
P +T+ L+ D+ ++ + E N+ N ++ ++A EL+
Sbjct: 262 PGVMTYGFLLQGLCRVRQADEARAMLGRVP---ELNVVLFNTVIGGCLAEGKLAEATELY 318
Query: 513 E----ETTRANSSGYTFLS---------GDGAPL---------KPDEYTYSSMLEASATA 550
E + + ++ Y+ L G L P+ TY+ +L +
Sbjct: 319 ETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKN 378
Query: 551 HQWEYFEYV---------------YKGMALSGCQLDQTKHAWLLVEASRAGKC------- 588
W+ + Y GM + C+ + A L++ R+ C
Sbjct: 379 GMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSY 438
Query: 589 -----HLL--------EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
HL EH F++LLE G + + + + ++ + ++ AV L M
Sbjct: 439 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 498
Query: 636 APFHITERQWTELF-----ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHAL 690
+ + L + N DR S LE++ N S I +S L
Sbjct: 499 HGCSLDVVSYNGLIKAMCKDGNVDR-SLVLLEEMAEKGIKPNNVSYNILISE-------L 550
Query: 691 CRSEKERD 698
C+ + RD
Sbjct: 551 CKERRVRD 558
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 156/378 (41%), Gaps = 39/378 (10%)
Query: 204 GSWRQAMSVLDWVYGLKDKRD----LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
G R ++++ +K + + L+ RF + L+ GKAG E++++FN M +
Sbjct: 129 GRARNLNVARNFLFSIKRRSNGTVKLEDRF-FNSLIRSYGKAGLFQESVQVFNSM-KSVG 186
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE-----PDL 314
+ P + ++S+ L+ L++R R NM + +D +L PD
Sbjct: 187 VSPSVVTFNSL------------LLILLKRGRT-------NMAQSVFDEMLSTYGVTPDT 227
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+N ++ + F FK++ + P TY ++ + ++GK ++ H
Sbjct: 228 YTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNG 287
Query: 375 MAKSGEAIG--ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
M K + +TY LVR + + +I+EA+ M +G+ Y L LC
Sbjct: 288 MVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEV 347
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 491
+ + E P T L+ + + G+++D + +F+ M + P+ T
Sbjct: 348 QKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSAT 407
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+ +++ + F +A++LF+E S L DG P Y SM E
Sbjct: 408 YSVLIRNLCQRGNFERAEQLFDEL----SEKEILLRDDGC--TPLVAAYKSMFEFLCRNG 461
Query: 552 QWEYFEYVYKGMALSGCQ 569
+ E V++ + G Q
Sbjct: 462 KTAKAERVFRQLMKRGTQ 479
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/500 (19%), Positives = 189/500 (37%), Gaps = 49/500 (9%)
Query: 145 WHPEKRWRSEAEAIRVLVDRLSE-REM-TAKNWKFVRIMNQSGLMFTEGQMLK-LLKGLG 201
W PE + ++ ++++ L R + A+N+ F +G + E + L++ G
Sbjct: 108 WAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYG 167
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
G +++++ V + +K S + LL IL K GR + A +F+ ML +
Sbjct: 168 KAGLFQESVQVFN---SMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVT 224
Query: 262 PDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKPS---------------------KR 297
PD ++ + + ++ E K + R + P
Sbjct: 225 PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNV 284
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ M +K+ + L PD+V Y ++ H+ VF+++ GLKP+ TY ++
Sbjct: 285 VNGMVKKSTN--LNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIK 342
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAI-GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ + K D + + F G I T L+ A G +N+A+ M V
Sbjct: 343 GLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVR 402
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKS----LRH--SKPLEITFTGLIISSMDGGH 470
++ Y L LC G ++ A + +++ LR PL + + G
Sbjct: 403 PDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGK 462
Query: 471 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN-----SSGYTF 525
+F+ + + + ++K + R F EL R + + +
Sbjct: 463 TAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSL 522
Query: 526 LSG---DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+ G G PL + T M+++S + + + +A GC + + L++E
Sbjct: 523 IDGLLQKGEPLVAYQ-TLEKMIKSSHVPETSTFHSILARLLA-KGCAHESARFIMLMLEG 580
Query: 583 SRAGKCHLLEHAFDSLLEAG 602
+L H L +G
Sbjct: 581 KIRQNINLSTHTVRLLFGSG 600
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 134/319 (42%), Gaps = 31/319 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++A + +AGR +A+ +F+ M E L P+ Y+++ + G L+ +L +
Sbjct: 16 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVL-PNHITYNTMIDGHIKGGDLEAGFRLRD 74
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M L+P+ + YN +L+ + + + ++ + P
Sbjct: 75 QMVCHG---------------LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD 119
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + + ++G + F K K+G IG T +L+ ++GK++ A ++
Sbjct: 120 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ 179
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
++ G+V T +Y L C G + A ++KS RH KP IT+ LI
Sbjct: 180 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS-RHIKPDHITYNALINGLCKA 238
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
I + + M+D+ P + T N ++ Y R K + E
Sbjct: 239 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG-------- 290
Query: 528 GDGAPLKPDEYTYSSMLEA 546
LKP+ +Y S++ A
Sbjct: 291 -----LKPNVVSYGSIVNA 304
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 169/416 (40%), Gaps = 45/416 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G + ++LD + ++ + F Y+ L L + G L +F L
Sbjct: 91 LLSGLCRAGRMGETSALLDE---MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL 147
Query: 256 EDCNLYPDIAAYHSVAVTL------GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
++ D ++ ++ L G+V + +E+++ + P++ I N +
Sbjct: 148 KNGVTIGD----YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 203
Query: 310 -----------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
++PD + YNA++N + + + +++ +G+ P+ T+
Sbjct: 204 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 263
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++ ++G+ + +M ++G ++Y +V AF + GKI EAVA + +M
Sbjct: 264 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 323
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+ V+ A VY + +G A ++VEK+KS P +T+ LI + I
Sbjct: 324 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS-NGISPSIVTYNLLIKGLCNQSQIS 382
Query: 473 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ I + +H P+ + N ++ KA +L + R + G
Sbjct: 383 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ---RMHKYG--------- 430
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+K TY ++ A + EY+Y+ M + H ++ S+ G
Sbjct: 431 -IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 485
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 26/260 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L++ L + E + M +G+ T L+ G G + VL +
Sbjct: 231 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM---- 286
Query: 221 DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ LK V Y ++ K G+ EA+ I + M ++ P+ Y+++ + G
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGP 345
Query: 280 LKELVKLIERMRQK---PSKRIKNMHRK---NWDPVLE--------------PDLVVYNA 319
+ L+E+M+ PS N+ K N + E PD V YN
Sbjct: 346 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 405
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++AC + +++ K G+K + TY + + +G+ + + ++KM ++
Sbjct: 406 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 465
Query: 380 EAIGALTYKVLVRAFWEEGK 399
+ ++V A+ + G
Sbjct: 466 VVPSNAIHNIMVEAYSKYGN 485
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 139/321 (43%), Gaps = 26/321 (8%)
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+L+ C S V ++ +R+ G PS + +E +++S K+D V + F++M G
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
L Y + A + G + A+ M++R VV VY L LC R +DA
Sbjct: 62 FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAE 121
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 498
+ ++ S+R+ P +TF LI G +D I + + M K+ EP+I T N++L
Sbjct: 122 KLFGEM-SVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA------SATAHQ 552
+ +A+ + E +G+ PD +TYS + + A A
Sbjct: 181 LCKARRIEEARCMLNEI---KCNGFV----------PDGFTYSIIFDGLLKSDDGAGAAL 227
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
Y E + KG+ ++D + LL + GK E SL+E G +P + +
Sbjct: 228 DLYREAIGKGV-----KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNT 282
Query: 613 MLIQAIVQSNYEKAVALINAM 633
++ + ++A+ I M
Sbjct: 283 IVNGYCQIGDMDRAILTIEQM 303
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 122/306 (39%), Gaps = 16/306 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P V+YN ++N +Q+ GL+P+ + ++ + D
Sbjct: 273 LVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAE 332
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E+ +KM G A TY +L+ + + + ME+ G Y L CL
Sbjct: 333 EWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCL 392
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C +G+ +A +V+ + R P + LI S G + + + F M K+
Sbjct: 393 CKDGKILEAEMVLRDMVG-RGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGAT 451
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I T N+++K + +A+E+F T S+G+ PD TY+S++ +
Sbjct: 452 IVTYNSLIKGLCKMGKLKEAEEMFFLIT---STGHC----------PDVITYNSLISGYS 498
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A + +Y+ M G + L+ S+ G L E F+ +L+ P +
Sbjct: 499 NAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRV 557
Query: 609 FFTEML 614
+ M+
Sbjct: 558 VYNAMI 563
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 104/533 (19%), Positives = 206/533 (38%), Gaps = 79/533 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ SE +M ++ + M Q G + + G + +++ L + + + + + GL
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ D + VY + + K G A+ +F M + P++ Y+ V +G GL
Sbjct: 61 GFRPD---KLVYGRAMLAAVKLGDLKLAMELFETMKRR-KVVPNVFVYN---VLIG--GL 111
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
KE +R+R K M +N L P+ V +N +++ + + + ++
Sbjct: 112 CKE-----KRIRD-AEKLFGEMSVRN----LVPNRVTFNTLIDGYCKAGEVDVAIGLRER 161
Query: 340 LRKSGLKPSAATY-----GLA-------MEVMLQSGK----------YDLVH-------- 369
++K ++PS T+ GL ML K Y ++
Sbjct: 162 MKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDD 221
Query: 370 ------EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
+ +R+ G I T +L+ +EGK+ +A ++++ + G+V +Y
Sbjct: 222 GAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYN 281
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 482
+ C G A+L +E+++S R +P I F +I + ID + M
Sbjct: 282 TIVNGYCQIGDMDRAILTIEQMES-RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVG 340
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGY----TFLSGDGAPLK 534
P++ T N ++ Y R +FS+ ++ EE + N Y L DG L+
Sbjct: 341 KGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILE 400
Query: 535 --------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
P+ Y+ +++ S T + + M+ +G + L+
Sbjct: 401 AEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIK 460
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ GK E F + G P + + ++ N +K + L M
Sbjct: 461 GLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETM 513
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 20/264 (7%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+F M+++G+ T L+KGL G ++A + + D+ Y L
Sbjct: 437 LRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDV---ITYNSL 493
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
++ AG + L ++ M + L P I +H + G KE +KL E +
Sbjct: 494 ISGYSNAGNSQKCLELYETM-KKLGLKPTINTFHPLIS-----GCSKEGIKLKETL---- 543
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
M + N L PD VVYNA+++ + + F + K++ G++P TY
Sbjct: 544 ---FNEMLQMN----LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNS 596
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ L+ GK + M G A TY +L++ + N A R M + G
Sbjct: 597 LILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENG 656
Query: 415 VVGTASVYYELACCLCNNGRWQDA 438
+ + EL+ L +GR Q+A
Sbjct: 657 FLPNVCICNELSTGLRKDGRLQEA 680
>gi|255582522|ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 194/468 (41%), Gaps = 69/468 (14%)
Query: 134 LGSDYFAKN--------VEWHPEKRWR------------------SEAEAIRVLVDRLSE 167
LGS F N + WHP K R SE LV R
Sbjct: 15 LGSSNFTNNFPQIHNPTLSWHPCKNLRQTHITCVSTRPRKKRFPISEESETEDLV-RYVL 73
Query: 168 REMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
R ++ VR +++ + L + LG + W Q + V W+ K + +
Sbjct: 74 RSFSSDKVPLVRTLDKYVRVVRTEHCFLLFEELGRRDKWLQCLEVFRWMQ--KQRWYIAD 131
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS-VAVTLGQVGLLKELVKL 286
VY+KL++++GK G+ A+ +F+ M + PD + Y++ + L K L+K
Sbjct: 132 SGVYSKLISVMGKKGQTRMAMWLFSEM-RNSGCRPDSSVYNALITAHLHSKDKAKALIKA 190
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +++K M R +P++V YN +L A + V +FK L +S +
Sbjct: 191 LGYF-----EKMKGMQR------CQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVS 239
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE---GKINEA 403
P TY M+ ++G + +M + +T+ +L+ ++ ++ K+ +
Sbjct: 240 PDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKMEQV 299
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRW---QDAMLVVEKIKSLRHSKPLEITFTG 460
++ + ++R + T + N G+ ++A V++K+ ++++ P IT+
Sbjct: 300 FKSLLHSKERPTLPT------FNSMITNYGKARQKENAESVLQKMTKMKYT-PNFITYES 352
Query: 461 LIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
LI+ + IF M + E + T+NAML VY N + +A LF+ A
Sbjct: 353 LIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLFDN---AR 409
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+ G L PD TY + +A A+ + + + K M G
Sbjct: 410 NVG----------LLPDSTTYKLLYKAYTKANMKKLVQKLLKHMDRDG 447
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 116/297 (39%), Gaps = 55/297 (18%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD--LVHE 370
D VY+ +++ Q + W+F ++R SG +P ++ Y + L S L+
Sbjct: 131 DSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALITAHLHSKDKAKALIKA 190
Query: 371 --FFRKMAKSGEA-IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
+F KM +TY +L+RAF + +N+ A ++++Q V + +Y
Sbjct: 191 LGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIV--SPDIY----- 243
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCE 486
T+ G++ + G I + S+ MK + C+
Sbjct: 244 -----------------------------TYNGVMDAYGKNGMIREMESVLSRMKSNQCK 274
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+I T N ++ Y + F K +++F+ + L P P T++SM+
Sbjct: 275 PDIITFNLLIDSYGKKQDFDKMEQVFK----------SLLHSKERPTLP---TFNSMITN 321
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
A Q E E V + M + + L++ FD ++E+G+
Sbjct: 322 YGKARQKENAESVLQKMTKMKYTPNFITYESLIMMYGFCDSVSKAREIFDDMIESGK 378
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 201/486 (41%), Gaps = 51/486 (10%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
E WR E ++ L DR+ ++ K +FV ++ + ++FT ++K +G + SW
Sbjct: 159 EMNWR---ERVKFLTDRI----LSLKCDEFVGHVLEEHRVLFTPTDFCFVVKSVG-QSSW 210
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ + + + ++ +R V T +L++LGKA + A+ IF + + +
Sbjct: 211 QRALELYECL-TMQQWYATNARMVAT-ILSVLGKANQEGIAVEIF--AKAESVIADTVQV 266
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQ------------------KPSKRIKNMHRKNWDP 308
Y+++ + G +++ ++ MR+ K + + + D
Sbjct: 267 YNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDE 326
Query: 309 V----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
V L PD++ YN +++AC K VF + + +P TY + V + G
Sbjct: 327 VGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGF 386
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
F K+ +G + A+TY L+ AF +EG + M + G Y
Sbjct: 387 ALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNT 446
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
+ +GR +A+ + +KS P +T+T LI I++ + M D
Sbjct: 447 IIHMYGKHGRHDEALRLYRDMKS-SGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDA 505
Query: 485 -CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
+P + T +A++ Y++ +A+E F R SG +K D YS M
Sbjct: 506 GVKPTLHTYSALICAYAKVGRRVEAEETF---NRMRESG----------IKADHLAYSVM 552
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
L+ ++ + +Y+ M +G D + +L R ++E E G
Sbjct: 553 LDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGS 612
Query: 604 I-PHPL 608
+ PH +
Sbjct: 613 MNPHDI 618
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/384 (19%), Positives = 165/384 (42%), Gaps = 35/384 (9%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV--TLGQVGLLKELV 284
S +Y ++++ + G P A + E ++ D H + + T G++ + +
Sbjct: 751 SECLYQSMVSVYCRIGFPETAQHLL-YHAEKNDIILDNVTVHIIDIIETYGKLKMWQSAE 809
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
++E +RQ+ SK M RK W NA+++A S ++ +F + + G
Sbjct: 810 SIVENLRQRCSK----MDRKVW-----------NALIHAYAFSGCYERARAIFNTMMREG 854
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
P+ + ++ ++ G+ ++ +++ I + +++ AF + G + E
Sbjct: 855 PSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQ 914
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL-II 463
M+ G T +Y + LC R +D +++ ++ L+I + L +
Sbjct: 915 KVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLY 974
Query: 464 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
SS++ + I+Q ++D P+ T N ++ +Y R+ + +E + S G
Sbjct: 975 SSIE--EFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRD---HRPEEGLSLMHKMKSLG 1029
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
L+P TY SM+ A + ++ E +++ + +G +LD++ + ++
Sbjct: 1030 ----------LEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMY 1079
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPH 606
+G E+ + + EAG P+
Sbjct: 1080 RTSGDHQKAENLLEIMKEAGIEPN 1103
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 234 LLAILGKAG-RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV---GLLKE------L 283
+L+ +G+AG +P L+IFN +L+ LY I + ++ V + GL + L
Sbjct: 951 MLSEMGEAGFKPD--LQIFNSVLK---LYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTL 1005
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ + R +P + + MH+ LEP Y +++ A + +F++LR +
Sbjct: 1006 ITMYCR-DHRPEEGLSLMHKMK-SLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSN 1063
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G K + Y L M++ SG + M ++G T +L+ ++ + G+ EA
Sbjct: 1064 GYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEA 1123
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGL 461
++N+ G V Y + G DA +EK+ ++ + +P +T
Sbjct: 1124 DRILKNLRTMGAVLDTLPYSSVIDAYLKKG---DAKAGIEKLTEMKEAAIEPDHRIWTCF 1180
Query: 462 IISSMDGGHIDDCISIFQHMK 482
I ++ G ++D ++ ++
Sbjct: 1181 IRAASLSGEVNDANNLLNALQ 1201
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 16/184 (8%)
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAML--KVYSRNDMFSKAKELFEETTRANSSGYTF 525
G+ + +F M++ CEP+I + N ++ KV S + A EL +E +
Sbjct: 278 GNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFG------ 331
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
L+PD TY++++ A + + V+ M + CQ D + ++ R
Sbjct: 332 -------LRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRC 384
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 645
G EH F+ L G P + + +L + N EK + M F E +
Sbjct: 385 GFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTY 444
Query: 646 TELF 649
+
Sbjct: 445 NTII 448
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/263 (16%), Positives = 109/263 (41%), Gaps = 19/263 (7%)
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
L ++ +L +L+ G+ + V + G+K + +Y ++ +L + R
Sbjct: 890 LKISKSSILLMLEAFAQAGNLFEVQKVYN---GMKAAGYFPTMHLYRLMIGLLCRFKRVR 946
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+ +R+ + + PD+ ++SV + + + +I +M Q
Sbjct: 947 D-VRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNM-GVIYQMIQ------------- 991
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
D L PD YN ++ H+ + + +++ GL+P TY + + Y
Sbjct: 992 -DAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLY 1050
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
D E F ++ +G + Y ++++ + G +A + M++ G+ + + L
Sbjct: 1051 DQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLL 1110
Query: 426 ACCLCNNGRWQDAMLVVEKIKSL 448
+G+ ++A +++ ++++
Sbjct: 1111 MVSYGKSGQPEEADRILKNLRTM 1133
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 135/318 (42%), Gaps = 30/318 (9%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD YH + +G+ +++++K+ E M K K V YN ++
Sbjct: 799 PDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKST---------------YVTYNTII 843
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ V S ++ QL G P+ TYG ++ +L+ G + F +M + G
Sbjct: 844 SGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCE 903
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
Y +L+ + G + +M ++G+ Y + LC +GR D +
Sbjct: 904 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 963
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
+++ + +P IT+ LI G +++ +S++ M K PN+ T N+++
Sbjct: 964 FKQLTDM-GLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLG 1022
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ ++A +++EE + G+ KP+ +TY++++ + + E Y
Sbjct: 1023 KAGKAAEAGKMYEELL---AKGW----------KPNVFTYNALIRGYSVSGSPENAFAAY 1069
Query: 561 KGMALSGCQLDQTKHAWL 578
M + GC+ + + + L
Sbjct: 1070 GRMIVGGCRPNSSTYMQL 1087
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/505 (18%), Positives = 182/505 (36%), Gaps = 124/505 (24%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
G + +G +G R A L +K+ + + + Y L+ L K+G EA+ +
Sbjct: 137 GTFCTVFGAVGVEGGLRSAPVALPV---MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDV 193
Query: 251 FNLMLEDC----------------------------------NLYPDIAAYHSVAVTLGQ 276
+ M D + P++ +Y LGQ
Sbjct: 194 YKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQ 253
Query: 277 VGLLKELVKLIERMRQKPSK-----------------RIKNMHRKNWDPVL---EPDLVV 316
G L+E +++ +M ++ K R+ + W +PD V
Sbjct: 254 AGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVT 313
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y +L+ C S + V ++ L+ G + +Y A++ + Q G+ D + F +M
Sbjct: 314 YITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMK 373
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG---------------------- 414
+ G +Y L+ F + + N A+ +M G
Sbjct: 374 QKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESL 433
Query: 415 -----------------VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
VV +V Y LA GR A V ++K++ S P IT
Sbjct: 434 KALKRYELMKSKGIVPDVVAGNAVLYGLA----KTGRLGMAKRVFHELKAMGIS-PDNIT 488
Query: 458 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+T +I + D+ + IF M ++ C P++ +N+++ + + ++A ++F E
Sbjct: 489 YTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELK 548
Query: 517 RAN-----SSGYTFLSGDGAPLK-----------------PDEYTYSSMLEASATAHQWE 554
N + T L+G G K P+ TY+++L+ +
Sbjct: 549 EMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVN 608
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLL 579
Y + M ++GC D + + ++
Sbjct: 609 YALDMLYSMTMNGCMPDLSSYNTVM 633
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 112/569 (19%), Positives = 206/569 (36%), Gaps = 93/569 (16%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R + A+ L+D L + + WK + + L T+ LL GLG +G +
Sbjct: 514 ENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVK 573
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI----------------- 250
+ M +L+ G+ + Y +L L K G + AL +
Sbjct: 574 EVMQLLE---GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYN 630
Query: 251 ---FNLMLED---------CN----LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L+ ED C L PD A ++ + + GL+KE + + +P
Sbjct: 631 TVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQP 690
Query: 295 SKRIKN----------MHRKNWDPVLE------------PDLVVYNAVLNAC-----VPS 327
++ + R + +E DL + + + C + +
Sbjct: 691 DSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAA 750
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
H+ + K+ G+ +Y + ++ D+ E F +M + G TY
Sbjct: 751 HE------LVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTY 804
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+++ A + +I + + M +G T Y + L + +A+ + ++ S
Sbjct: 805 HLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMS 864
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFS 506
S P T+ L+ + G+I+D ++F M + CEPN N +L Y
Sbjct: 865 EGFS-PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTE 923
Query: 507 KAKELFE----ETTRANSSGYTF----LSGDG--------------APLKPDEYTYSSML 544
K ELFE + + YT L DG L+PD TY+ ++
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ + E +Y M G + + L++ +AGK ++ LL G
Sbjct: 984 HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWK 1043
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAM 633
P+ + ++ V + E A A M
Sbjct: 1044 PNVFTYNALIRGYSVSGSPENAFAAYGRM 1072
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 138/357 (38%), Gaps = 56/357 (15%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++ V S + V+K + G+ P+ TY + M + + V +M
Sbjct: 173 TYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEM 232
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV---VGTASVYYELACCLCNN 432
G +Y + +R + G++ EA +R ME+ G V T +V ++ LC+
Sbjct: 233 EARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI---LCDA 289
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLI-----------ISSM------DG------- 468
GR DA V K+K+ KP +T+ L+ +S + DG
Sbjct: 290 GRLADAKDVFWKMKA-SDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVS 348
Query: 469 -----------GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
G +D+ + +F MK P + N+++ + + D F++A ELF
Sbjct: 349 YTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM- 407
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
N G T P+ YT+ + + + Y+ M G D
Sbjct: 408 --NIHGPT----------PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN 455
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+L ++ G+ + + F L G P + +T M+ SN ++A+ + M
Sbjct: 456 AVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEM 512
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 116/280 (41%), Gaps = 19/280 (6%)
Query: 231 YTKLLAI--LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT +L I GK+G +AL+ + LM + + PD+ A ++V L + G L
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELM-KSKGIVPDVVAGNAVLYGLAKTGRLG------- 468
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M ++ +K M + PD + Y ++ C + +F ++ ++ P
Sbjct: 469 -MAKRVFHELKAMG-------ISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
++++ ++G+ + + F ++ + TY L+ EGK+ E + +
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M Y + CLC NG A+ ++ + ++ P ++ ++ +
Sbjct: 581 GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM-TMNGCMPDLSSYNTVMYGLVKE 639
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKA 508
+D+ +F MK P+ TV +L + R+ + +A
Sbjct: 640 DRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEA 679
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 110/282 (39%), Gaps = 20/282 (7%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E H K ++S ++ L + +M + + G T LL GL
Sbjct: 826 EMH-NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKD 884
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G+ A ++ D + + + +Y LL AG + +F M+E + PD
Sbjct: 885 GNIEDAEALFDEMLECGCEPNCA---IYNILLNGYRIAGDTEKVCELFESMVEQ-GMNPD 940
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
I +Y V TL G L + + +++ D LEPDL+ YN +++
Sbjct: 941 IKSYTVVIDTLCADGRLNDGLSYFKQLT---------------DMGLEPDLITYNLLIHG 985
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
S + + ++ + K G+ P+ TY + + ++GK + + ++ G
Sbjct: 986 LGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPN 1045
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
TY L+R + G A AA M G +S Y +L
Sbjct: 1046 VFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
+A + EA+ FN+M E + P++AA++S+ L + +++ ++ ++M + S
Sbjct: 146 ARAQKVDEAVYTFNVM-EKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFS--- 201
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
PD Y+ +L + + V+ ++ +G +P TYG+ ++
Sbjct: 202 -------------PDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDS 248
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ ++G+ + + M G Y VLV + E +I +AVA +ME+ G+V
Sbjct: 249 LCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPD 308
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKS---LRHSKPLEITFTGLIISSMDGGHIDDCI 475
VY L C ++++A V+ ++ +S+ I LI D D+
Sbjct: 309 IVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRD----DEAY 364
Query: 476 SIFQHMKDHCEPNIGTVNAMLKVYSRND 503
+F+ M C+P+ T M+K++ ND
Sbjct: 365 KVFRRMIKCCQPDCDTYTMMIKMFCEND 392
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 135/328 (41%), Gaps = 69/328 (21%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-----VYTKL 234
+M + G++ LL L + R+A + D + SRF Y+ L
Sbjct: 160 VMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFD---------KMNSRFSPDAKTYSIL 210
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK- 293
L G+A + +++ ML D PDI Y + +L + G ++E V++++ M +
Sbjct: 211 LEGWGRAPNLPKMREVYSEML-DAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRG 269
Query: 294 --PSKRIKNMHRKNW-------DPV----------LEPDLVVYNAVLNACVPSHQWKGVF 334
P+ I ++ + D V + PD+VVYNA+++A + +++ F
Sbjct: 270 CQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAF 329
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG----------- 383
V + G+ ++ T+ + + ++ G+ D ++ FR+M K +
Sbjct: 330 RVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKCCQPDCDTYTMMIKMFC 389
Query: 384 -------AL----------------TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
AL T+ VL+ ++ ++++A + +M ++G+ S
Sbjct: 390 ENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGS 449
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ +L L GR +VEK+ L
Sbjct: 450 TFGKLRQLLLKEGRKDVLDFLVEKMNIL 477
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 27/243 (11%)
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
W +Q ++ G + +Y + + + +Y L+ + M + G A+ T+ +++R +
Sbjct: 88 WARRQ-KRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRREG-AVNVETFGIIMRKY 145
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
K++EAV ME+ GVV + + L LC + + A + +K+ S R S P
Sbjct: 146 ARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNS-RFS-PD 203
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
T++ L+ ++ ++ M D CEP+I T M+ + +A + +
Sbjct: 204 AKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQ 263
Query: 514 ETT----------------------RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+ T R + TFL + + PD Y++++ A A
Sbjct: 264 DMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAK 323
Query: 552 QWE 554
++E
Sbjct: 324 KFE 326
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 19/223 (8%)
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
R ++ G T Y+ + L ++Q L+ + + +R + + G+I+
Sbjct: 90 RRQKRGGCAHTVRSYHTVVASLAKIRQYQ---LMWDVVAVMRREGAVNVETFGIIMRKYA 146
Query: 468 GGH-IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
+D+ + F M+ + PN+ N++L ++ KA+E+F+ + NS
Sbjct: 147 RAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFD---KMNSR---- 199
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
PD TYS +LE A VY M +GC+ D + ++ +
Sbjct: 200 -------FSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKT 252
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
G+ + G P ++ ++ V+ E AVA
Sbjct: 253 GRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVA 295
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 165/388 (42%), Gaps = 38/388 (9%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
TKL+ L + G+P E I + E+ + P + Y +V L K + L++++
Sbjct: 72 TKLMKTLIERGKPQEVHSITKGLTEEGH-RPTLVTYTTVLAALTLQKRFKSIPLLLKKVE 130
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
Q L PD + +N ++NA S K +F+++R+ G KP+A+T
Sbjct: 131 QNG---------------LRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTAST 175
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA--LTYKVLVRAFWEEGKINEAVAAVRN 409
+ ++ GK + + M++ E I TY +LV+A+ + I +A V
Sbjct: 176 FNALIKGFGIIGKPEESSKLLEIMSRE-ENIKPDDRTYNILVQAWCNKNNIEKAWGVVHR 234
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLIIS--SM 466
M G+ Y +A R ++ E I ++++K + G+++ S
Sbjct: 235 MVGAGLKPDVVTYNTIARAY---ARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSK 291
Query: 467 DGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
+G D I++ PN+ N++LK + L T+ T +
Sbjct: 292 EGNMADALKFIYKMQGFGVHPNLFIFNSLLKGF-----------LDITDTKGVDETLTLM 340
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
G +KPD TYS+++ A ++A E E +++ M SG + D + L RAG
Sbjct: 341 QEFG--VKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAG 398
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ E +++ G P+ + FT ++
Sbjct: 399 EPKKAEALLEAMATHGAHPNVVMFTTII 426
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 139/340 (40%), Gaps = 23/340 (6%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
V + K L + G +P+ TY + + ++ + +K+ ++G ++ + ++
Sbjct: 87 VHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNGLRPDSIFFNPMIN 146
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
AF E G + EA+ R M ++G TAS + L G+ +++ ++E + + K
Sbjct: 147 AFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMSREENIK 206
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P + T+ L+ + + +I+ + M +P++ T N + + Y+R S+A EL
Sbjct: 207 PDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAEL 266
Query: 512 FEE-----------TTRANSSGYT-----------FLSGDGAPLKPDEYTYSSMLEASAT 549
+ T GY+ G + P+ + ++S+L+
Sbjct: 267 ISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLD 326
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + M G + D ++ ++ S AG E F ++++G P
Sbjct: 327 ITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHA 386
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
F+ + + +KA AL+ AMA H +T +
Sbjct: 387 FSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTII 426
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 120/305 (39%), Gaps = 23/305 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ E + K R M + G T L+KG G G ++ +L+ + +
Sbjct: 144 MINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMS--R 201
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
++ Y L+ +A + + M+ L PD+ Y+++A +
Sbjct: 202 EENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMV-GAGLKPDVVTYNTIARAYARGKET 260
Query: 281 KELVKLIERMRQK---PSKR----IKNMHRKNWDPV-------------LEPDLVVYNAV 320
+LI +M+ P+ R + + + K + + P+L ++N++
Sbjct: 261 SRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSL 320
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
L + KGV +++ G+KP TY M +G + E F+ M KSG
Sbjct: 321 LKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGI 380
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ +L + + G+ +A A + M G ++ + C+ + +DA+
Sbjct: 381 EPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALR 440
Query: 441 VVEKI 445
V +++
Sbjct: 441 VYDRM 445
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/515 (20%), Positives = 203/515 (39%), Gaps = 63/515 (12%)
Query: 87 RIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWH 146
++ RL F N +R++L E +FEK
Sbjct: 196 KVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK----------------------MS 233
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
E+ R + +L+ L E + ++ + M + G + L+K D G
Sbjct: 234 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 293
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+AM +LD + K + + YT L+ L + G+ EA +F ML+ L P I
Sbjct: 294 DKAMKMLDE---MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH-GLCPGIIT 349
Query: 267 YHSVAVTLGQVGLLK---ELVKLIERMRQKPSKRIKN-----------------MHRKNW 306
++++ + G + +L+ ++E+ KP+ R N + R+
Sbjct: 350 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVV 409
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D L PD V YN +++ Q F +F + +GL+P T+ ++ + + G+ +
Sbjct: 410 DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLE 469
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ M K G ++ +T+ L+ + GK + NM + + TA +
Sbjct: 470 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 529
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 484
L + + +A ++ K+ +++ P +T T LI G + + + MK
Sbjct: 530 DALGKDYKLNEANAMLGKM--MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 587
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
C PN+ T ++ N +A ET + S + + P+ +TY+ ++
Sbjct: 588 CSPNVYTYTIIINGLCNNGRVEEA-----ETILFSMSSF--------GVSPNHFTYAVLV 634
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+A A + + + M +GCQ + ++ LL
Sbjct: 635 KAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 669
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 176/451 (39%), Gaps = 63/451 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L +AGR EA ++ M+E P Y + +G+ + +K+++ M
Sbjct: 245 YSILIHGLCEAGRLEEAFQLKQEMVEK-GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 303
Query: 291 RQKPSKRIKNMH----------------------RKNWDPVLEPDLVVYNAVLNACVPSH 328
K + N+H RK L P ++ +NA++N
Sbjct: 304 ATKAC--VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG 361
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
F + + K KP+ TY ME + + K R++ +G +TY
Sbjct: 362 WVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYN 421
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV----VEK 444
+LV F +EG++N A +M G+ + L LC GR + A + V+K
Sbjct: 422 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 481
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML------- 496
SL E+TFT LI G D +F++M ++ C T N L
Sbjct: 482 GISLD-----EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 536
Query: 497 KVYSRNDMFSKAKE------------LFEETTRANSSGYTFLSGD---GAPLKPDEYTYS 541
K+ N M K + L E RA + + + A P+ YTY+
Sbjct: 537 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 596
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSL 598
++ + E E + M+ G + +A L+ +AG+ L+ AF ++
Sbjct: 597 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR---LDRAFQIVSTM 653
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
++ G P+ ++ +L ++ + A AL
Sbjct: 654 VKNGCQPNSHIYSALLSGFVLSNTAIGARAL 684
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 170/415 (40%), Gaps = 45/415 (10%)
Query: 334 FWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
F VF+++ K +P++ TY + + + ++G+ + + ++M + G TY VL++
Sbjct: 226 FRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIK 285
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS- 451
A + G ++A+ + M + V Y L LC G+ ++A V K+ L+H
Sbjct: 286 AKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM--LKHGL 343
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM----KDHCEPNIGTVNAMLKVYSRNDMFSK 507
P ITF LI G + +S FQ + K +C+PNI T N +++ R K
Sbjct: 344 CPGIITFNALINGYCKEGWV---VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400
Query: 508 AKEL----------------------FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
A L F + + N + F S + A L+PD +T++++++
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+ E + M G LD+ L+ + GK + F++++E +
Sbjct: 461 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 520
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFESNEDRISRDKL 661
F L +A A++ M P +T E + E +S L
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 580
Query: 662 EKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLH 716
E++ A C+ N + I ++ L E E L S + FG +SP H
Sbjct: 581 ERMKQAGCSPNVYTYTIIINGLCNNGRV---EEAETILFSMSSFG-----VSPNH 627
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 5/160 (3%)
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+R+M G +G + Y+ +V A + G + A + + G V L C
Sbjct: 159 YRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCR 218
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
+A V EK+ + +P +T++ LI + G +++ + Q M + C+P+
Sbjct: 219 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 278
Query: 491 TVNAMLKVYSRNDMFSKAKELFEE-TTRA---NSSGYTFL 526
T ++K M KA ++ +E T+A N YT L
Sbjct: 279 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 120/560 (21%), Positives = 208/560 (37%), Gaps = 93/560 (16%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + + DW+ + K S F Y L L KA A F M PD
Sbjct: 16 GKISTIVRLFDWLG--RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR-GYPPD 72
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR--------IKNMHRKN-WDPVLE--- 311
Y V L + G L + +L+ ++R+ K I + + D LE
Sbjct: 73 DFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFK 132
Query: 312 ---------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
PD+V +N++L + F +F+ + K+G +P+ +Y ++ + ++
Sbjct: 133 TMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKA 192
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G+ D + +M + + Y V + ++ EA R M +G A +
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAF 252
Query: 423 YELACCLCNNGRWQDAM-----------LVVEKIKSL-----RHSKPLEITFTGLIISSM 466
+ LC G ++A ++ E K+ R+ P F LI +
Sbjct: 253 STVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC 312
Query: 467 DGGHIDDCISIFQHMKD----HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ D + +FQ MK +C PN+ T N M+ + +A+EL E AN
Sbjct: 313 KSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEM--ANYG- 369
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
L PD TYS++++ + + + + M+ G D A +L
Sbjct: 370 ----------LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL 419
Query: 583 SRAGKC-HLLEH------------------AFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
S+AGK + L H D L +AG I + F ++ A +
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDV 479
Query: 624 EKAVALINAM--------AYAPFHITERQW----TELFESNEDRISRDKLEKLL-----N 666
+I A+ A+A F ++ T L+ S D ++R+ LE L
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT 539
Query: 667 ALCNCNAASSEITVSNLSRA 686
+LC + ++ V L +A
Sbjct: 540 SLCKPDFVMHKMVVDGLCKA 559
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 181/447 (40%), Gaps = 66/447 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL +A + +++ + ++ S Y+ LL L KAGR EA R++ M+
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVIS---YSTLLDGLCKAGRLDEACRLWEEMV 206
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK------------------- 296
E + PD+ AY S L + + E +M K SK
Sbjct: 207 EK-SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHA 265
Query: 297 ------RIKNMHR--------KNWDPVLE----PDLVVYNAVLNACVPSHQW-KGV--FW 335
I+++ R K ++ ++ P ++N +++A S + GV F
Sbjct: 266 EEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQ 325
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
K +++ P+ TY + ++ + ++ + D E +MA G + +TY LV
Sbjct: 326 RMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLC 385
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ GK++ A + M + GV + + L G+ A+ +E +K+ R S P
Sbjct: 386 KLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA-RGSTPDL 444
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+ L+ G ID+ I+ M C P++ + ++ R+ + A +F+E
Sbjct: 445 VTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQE 504
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ + PD Y S+L+ A + + K S C+ D
Sbjct: 505 MVKRG-------------VLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFVM 548
Query: 575 HAWLLVEASRAGK----CHLLEHAFDS 597
H ++ +AGK C ++E D+
Sbjct: 549 HKMVVDGLCKAGKAEDACEVVERMADA 575
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 160/416 (38%), Gaps = 52/416 (12%)
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R+ G + S TY ++ + ++ L +E F++M + G TY +++R + G++
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
++A + + + GV Y + C R DA+ + + + + P +TF
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L+ G + + +F++M K CEPN+ + + +L + +A L+EE +
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
PD Y+S + A++ + M G + D + ++
Sbjct: 210 CV-------------PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256
Query: 580 VEASRAGKC-----HLLEH------------AFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ G ++EH F+ ++ P F LI A+ +S
Sbjct: 257 GILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNT-LIHAVCKSK 315
Query: 623 -YEKAVALINAMA-----YAPFHITERQWTELFESNEDRISR----DKLEKLLNALCNCN 672
V L M Y P ++ E + D + + D+ ++L+N + N
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNL------ETYNIMVDNLCKAKQLDEAQELVNEMANYG 369
Query: 673 AASSEITVSNLSRALHALCRSEKERDL----SSSAHFGSQAIDISPLHGIHEAFDV 724
+ +T S L L L + ++ DL S F D S L+ + +A V
Sbjct: 370 LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 103/280 (36%), Gaps = 51/280 (18%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E ++VD L + + + + V M GL L+ GL G +A +L+
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEE 399
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + F +L L KAG+ AL M PD+ Y+++ L
Sbjct: 400 ---MSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR-GSTPDLVTYNTLLDGLC 455
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
+ G + E + + +M PD+ Y ++ A S Q G
Sbjct: 456 KAGRIDEAITFLAKMVAAKCT---------------PDVFSYTIIITALCRSGQAAGAHA 500
Query: 336 VFKQLRKSGLKPSAATY-------------GLAMEVM-------------------LQSG 363
+F+++ K G+ P Y LA+E++ ++G
Sbjct: 501 IFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAG 560
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
K + E +MA +G A TY +VR + GK+++A
Sbjct: 561 KAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKA 600
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 110/565 (19%), Positives = 219/565 (38%), Gaps = 67/565 (11%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+R A LV L+ ++ + M+ SG + + L G W A+
Sbjct: 200 YRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADAL 259
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN-LYPDIAAYHS 269
++L+ K+ +L + T++++ L +A +EA+ + M CN P++ Y +
Sbjct: 260 NMLE-----KEDFNLDTVLC-TQMISGLMEASLFNEAMSFLHRM--RCNSCIPNVVTYRT 311
Query: 270 VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
+ L +++ + KRI NM P+ ++N++++ +
Sbjct: 312 L------------LSGFLKKKQFGWCKRIINMMMTEG---CNPNPSLFNSLVHGYCNAGD 356
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGL------AMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
+ + +F ++ G P Y + E + + DLV + + +M + +
Sbjct: 357 YAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLN 416
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+ R GK +A ++ M ++G V S Y ++ LC + + + L+ +
Sbjct: 417 KVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQ 476
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN 502
++K P T+T LI S G I+ S F M+ C PN+ T A+L Y ++
Sbjct: 477 EMKR-AGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKS 535
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY-K 561
+A ++F A P+ TYS++++ A + + VY K
Sbjct: 536 KQLIQAHDIFHRMVDA-------------ACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582
Query: 562 GMALSG-------------CQL--DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ SG C + + + L+ +A K D++L AG P+
Sbjct: 583 LIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPN 642
Query: 607 PLFFTEMLIQAIVQ----SNYEKAVALINAMAYAP-FHITERQWTELFESNEDRISRDKL 661
+ + + LI + N ++ + Y P H +F+ ++ L
Sbjct: 643 QIVY-DALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701
Query: 662 EKLLNALCNCNAASSEITVSNLSRA 686
++LN CN N + + LS+
Sbjct: 702 SEMLNDSCNPNVVTYTAMIDGLSKV 726
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/506 (19%), Positives = 200/506 (39%), Gaps = 77/506 (15%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+++ GL + + +AMS L + ++ + + Y LL+ K + RI N+M
Sbjct: 276 QMISGLMEASLFNEAMSFL---HRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMM 332
Query: 255 L-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM----------------------R 291
+ E CN P+ + ++S+ G KL RM
Sbjct: 333 MTEGCN--PNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQE 390
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLV---VYNAVLNACVPS-HQWKGVFWVFKQLRKSGLKP 347
+ P+ + ++ K ++ +L V V A + C+ +++ F + K++ + G P
Sbjct: 391 ELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVP 450
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+TY + + Q+ K + F++M ++G TY +L+ +F + G I +A +
Sbjct: 451 DTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARS-- 508
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
W D M V P +T+T L+ + +
Sbjct: 509 ---------------------------WFDEMRSV-------GCSPNVVTYTALLHAYLK 534
Query: 468 GGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE---TTRANSSGY 523
+ IF M D C PN T +A++ + KA E++E+ T+ S +
Sbjct: 535 SKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDF 594
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
F D + P+ TY ++++ A + + M +GC+ +Q + L+
Sbjct: 595 YFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFC 654
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
+ GK + F + + G +P +T ++ + + A+ +++ M +
Sbjct: 655 KIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVV 714
Query: 644 QWTELFESNEDRISR-DKLEKLLNAL 668
+T + D +S+ ++EK LN L
Sbjct: 715 TYTAMI----DGLSKVGEIEKALNLL 736
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 145/371 (39%), Gaps = 36/371 (9%)
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+K + +K M RK + PD Y V+ + + + F +F++++++G+ P T
Sbjct: 434 EKAFQILKEMMRKGF----VPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYT 489
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + ++ ++G + +F +M G + +TY L+ A+ + ++ +A M
Sbjct: 490 YTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMV 549
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS---------------KPLEI 456
A Y L LC G Q A V EK+ + P +
Sbjct: 550 DAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVV 609
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+ LI + D + M CEPN +A++ + + A+E+F
Sbjct: 610 TYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRM 669
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
T+ GY P +TY+S+++ + + V M C + +
Sbjct: 670 TKC---GYL----------PSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTY 716
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---INA 632
++ S+ G+ + + E G P+ + +T ++ + ++ L +N+
Sbjct: 717 TAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNS 776
Query: 633 MAYAPFHITER 643
AP ++T R
Sbjct: 777 KGCAPNYVTYR 787
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 16/177 (9%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
++ VY L+ K G+ A +F L + C P + Y S+ + + G L +K+
Sbjct: 642 NQIVYDALIDGFCKIGKIDNAQEVF-LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 700
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M P++V Y A+++ + + + + + G
Sbjct: 701 LSEMLNDSCN---------------PNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCS 745
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
P+ TY ++ + ++GK D + F++M G A +TY+VL+ G ++EA
Sbjct: 746 PNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEA 802
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 115/323 (35%), Gaps = 43/323 (13%)
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G +D E ++ G A+TY LV+ G++ + M G S
Sbjct: 183 GLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTI 242
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
A LC GRW DA+ ++EK + T +I M+ ++ +S M+
Sbjct: 243 GYFAQALCKVGRWADALNMLEK----EDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMR 298
Query: 483 -DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYTFL------SGD-- 529
+ C PN+ T +L + + F K + E N S + L +GD
Sbjct: 299 CNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYA 358
Query: 530 ------------GAPLKPDEYTYSSML------EASATAHQWEYFEYVYKGMALSGCQLD 571
G+P P Y+ + E A + E VY+ M + C L+
Sbjct: 359 YAYKLFNRMTTCGSP--PGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLN 416
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVA 628
+ A GK E AF L E G +P +T+++ EK+
Sbjct: 417 KVNTANFSRCLCGVGK---FEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL 473
Query: 629 LINAMAYAPFHITERQWTELFES 651
L M A + +T L +S
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDS 496
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 114/299 (38%), Gaps = 56/299 (18%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
F+R M + G + + L+ + G AM VL + L D + + YT ++
Sbjct: 666 FLR-MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM--LNDSCN-PNVVTYTAMID 721
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
L K G +AL + +LM E+ P++ Y ++ LG+ G +KL ++M K
Sbjct: 722 GLSKVGEIEKALNLLSLM-EEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCA 780
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACV--------------------PSH-------- 328
P+ V Y ++N C P H
Sbjct: 781 ---------------PNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAV 825
Query: 329 -----QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
++ + +++ P A YG+ ++ ++G+ + E +++ + ++
Sbjct: 826 QGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLN 885
Query: 384 ALT---YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ Y L++A ++ EA M ++G+V V+ L L +W +A+
Sbjct: 886 MTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEAL 944
>gi|387219669|gb|AFJ69543.1| hypothetical protein NGATSA_2036000, partial [Nannochloropsis
gaditana CCMP526]
gi|422292844|gb|EKU20146.1| hypothetical protein NGA_2036000, partial [Nannochloropsis gaditana
CCMP526]
Length = 632
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 138/305 (45%), Gaps = 28/305 (9%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--- 290
LL + A R + +R+ M+E L P Y V + +++E +KL + M
Sbjct: 111 LLKLCSSANRQRDVVRLVGEMVEKDKLKPQAQTYSQVIEAATRADMVEEALKLFQTMIAE 170
Query: 291 -----RQKPSKRIKNMHRK-NWDPVLE------------PDLVVYNAVLNACVPSHQWKG 332
++ + + + R +W L+ P +VY A +NAC W+
Sbjct: 171 GFPAGDKECTDLMAALARNGDWSRALDLLQDIRVYTKRPPACIVYTAAVNACGNGGAWEM 230
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+ +++ + G+ P++ TY A++ ++GK++ F +M + G +TY V++
Sbjct: 231 ALMLMRRMEEEGIAPNSYTYSSAIKACSRAGKWEQASALFTEMQERGLPQNEVTYTVILN 290
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN-NGRWQDAMLVVEKIKSLRHS 451
A + G++ EA A + M++RG + ++ +Y A C+ +G +Q A+ E++K+
Sbjct: 291 AHAKAGRLQEAAACLEGMKKRG-LSPSTPHYTAAIDACSRSGEYQQALRWFEEMKN--EK 347
Query: 452 KPL-EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYS--RNDMFSKA 508
P+ +T++ I GG + + + M V ML V + R+D + A
Sbjct: 348 VPINRMTYSATIAVCGKGGAWEQAVRVLLDMMLTSRDGSSHVCYMLAVDACRRSDQWPVA 407
Query: 509 KELFE 513
L++
Sbjct: 408 AYLWD 412
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 14/205 (6%)
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
A TY ++ A + EA+ + M G +L L NG W A+ +++
Sbjct: 141 AQTYSQVIEAATRADMVEEALKLFQTMIAEGFPAGDKECTDLMAALARNGDWSRALDLLQ 200
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 502
I+ P I +T + + +GG + + + + M++ PN T ++ +K SR
Sbjct: 201 DIRVYTKRPPACIVYTAAVNACGNGGAWEMALMLMRRMEEEGIAPNSYTYSSAIKACSRA 260
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+ +A LF E L +E TY+ +L A A A + + +G
Sbjct: 261 GKWEQASALFTEMQERG-------------LPQNEVTYTVILNAHAKAGRLQEAAACLEG 307
Query: 563 MALSGCQLDQTKHAWLLVEASRAGK 587
M G + + SR+G+
Sbjct: 308 MKKRGLSPSTPHYTAAIDACSRSGE 332
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 187/464 (40%), Gaps = 44/464 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GLG + + M++L + +KD + + L+ L K R +AL +F M
Sbjct: 158 LLTGLGKAREFGK-MNLL--MRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMK 214
Query: 256 ---EDCNLY--PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
E+ ++ PD Y+++ L +VG +E + L+ +MR
Sbjct: 215 GEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCA-------------- 260
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P +N ++N S + + +F ++ + ++P+ T ++ M + + E
Sbjct: 261 -PTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVE 319
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
FFR M + G +TY V + AF +N+A+ + M + G A VYY L C L
Sbjct: 320 FFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLA 379
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNI 489
GR DA VV K+K + + LI +D M+ +P+
Sbjct: 380 QAGRLDDASSVVSKLKEAGFCLD-RVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDS 438
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N ++ +S+ F A + ++ T L P +TY +++ A
Sbjct: 439 VTYNTLISYFSKIGNFKLAHKFMKKMTEEEG------------LSPTVFTYGALIHAYCL 486
Query: 550 AHQWEYFEYVYKGM--ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ + ++K M S + + L+ + + + D + G +P+
Sbjct: 487 NNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNT 546
Query: 608 LFFTEMLIQAIVQSNY-EKAVALINAM---AYAPFHITERQWTE 647
+ + +A+ N+ +KA L++ M A P +IT TE
Sbjct: 547 TTYNS-IFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTE 589
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 88/450 (19%), Positives = 178/450 (39%), Gaps = 38/450 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LM 254
LL+ LG G +A++ + K+ V +++ +L K+GR A+ + + ++
Sbjct: 12 LLRRLGRIGMVDEALAAFSTL-----DSHAKNTNVRNEIINLLLKSGRVDNAMNVLDEML 66
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L + P+ V L ++ L+ VK I + K + PD
Sbjct: 67 LPESEFRPNDKTAGIVFNNLLKIDGLEGRVK---------EDEIAGLVSKFGKHNIFPDT 117
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRK-SGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ +++ S + + L +GLK +A L + + ++ ++ ++ R
Sbjct: 118 IALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNAL-LTGLGKAREFGKMNLLMR 176
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM-----EQRGVVGTASVYYE-LAC 427
KM +T+ +L+ + +I++A+ M E + V ++ Y L
Sbjct: 177 KMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLID 236
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 486
LC GR ++A+ ++ K++S P TF LI G I+ +F M++ E
Sbjct: 237 GLCKVGRQEEALCLMGKMRS-DQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIE 295
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ T+N ++ +++ S A E F + LK + TY+ + A
Sbjct: 296 PNVITLNTLVDGMCKHNRISTAVEFFRVMQQKG-------------LKGNNVTYTVFINA 342
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+ M+ GC D + L+ ++AG+ L EAG
Sbjct: 343 FCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLD 402
Query: 607 PLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
+ + ++ + ++ ++A +N M A
Sbjct: 403 RVCYNVLISEFCKKNKLDRAQEWLNEMELA 432
>gi|326509863|dbj|BAJ87147.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 757
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 115/576 (19%), Positives = 220/576 (38%), Gaps = 68/576 (11%)
Query: 151 WRSEAEAIRVLVDRLSEREM-TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
+R E +LV L+ + M + M + E + L+ G G ++A
Sbjct: 142 FRPEPATFALLVPILASKGMLNHARCILLDTMPSFSVCPDEATVAALVAAYGRAGIPQEA 201
Query: 210 MSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
+ + + L R + Y +L + GR A R++N M+ D + P ++ Y++
Sbjct: 202 VKLFRLMPELGITR---TALSYNAVLKAILCRGREAMARRVYNAMIAD-GVAPTLSTYNT 257
Query: 270 VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
+ G ++ V++ M+ + PD+ YN +LNA V
Sbjct: 258 LIWGFGLCKKMESAVRVFGDMKGHG---------------VAPDVTTYNTLLNAWVRKGD 302
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+ VF ++ ++GL+ ++ +Y + ++ + + K + F +M + G + T+ V
Sbjct: 303 LESARKVFDEMPEAGLERNSISYNVMIKGYVDANKVEEALGLFTEMGEKGLRLTEKTFAV 362
Query: 390 LVRAFWE-EGKINEAVAAVRNM-EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + EGK EA AV +M E+R SV+ L LC G + A+ V +K
Sbjct: 363 LMPGLCDDEGKAAEARKAVADMAERRLTPKDKSVFLRLVSTLCKAGDFDGALEVHKKSGQ 422
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-------------NA 494
+H + L+ S GG D + + + + GT+ N
Sbjct: 423 FKHVLVDPRQYGVLMESLCAGGKCDGAVQVLDELLEK-----GTLLSPKSPVLEAPAYNP 477
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+++ N KA+ F + + D+ ++S++ A +
Sbjct: 478 VIEYLCNNGNTDKAETFFRQLMKKGVD--------------DKSAFNSLIRGHAKEGALD 523
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + M G D HA L+ + + + A DS++E G +P P F ++
Sbjct: 524 AAKEILAIMTRRGVPTDPHSHALLIDSFLKKNEPADAKTALDSMMEHGHLPRPALFQSVM 583
Query: 615 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESN----EDRISRDKLEKLLNALCN 670
+ A ++ +M E+ TE + E R +E+ A+
Sbjct: 584 AALFNDGRVQTASRVMKSM-------IEKGITENMDMANKIVEALFMRGHVEE---AIGR 633
Query: 671 CNAASSEITVSNLSRALHALCRSEKERDLSSSAHFG 706
N + +L + L ALC +K + A F
Sbjct: 634 VNLMVENGCMPDLDKLLAALCEKDKVMEAQKLADFA 669
>gi|334187948|ref|NP_001190400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332006093|gb|AED93476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 185/435 (42%), Gaps = 49/435 (11%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG---QVGL 279
R ++SR TKL+ +L + GRPHEA +F + E + P + +Y ++ + Q G
Sbjct: 43 RTVRSR---TKLMNVLIERGRPHEAQTVFKTLAETGH-RPSLISYTTLLAAMTVQKQYGS 98
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ +V +E+ K D + +NAV+NA S + +
Sbjct: 99 ISSIVSEVEQSGTKL------------------DSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA-IGA--LTYKVLVRAFWE 396
+++ GL P+ +TY ++ +GK + E M + G +G T+ VLV+A+ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLE 455
+ K+ EA V+ ME+ GV Y +A C G A VVEK+ +KP
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI----GTVNAMLKVYSRNDM------ 504
T ++ G + D + + MK+ E N+ +N ++V R+ +
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLT 320
Query: 505 -----FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
F++ EL + T + +K D TYS+++ A ++A E V
Sbjct: 321 LLLMSFNEEVELV-GNQKMKVQVLTLM--KECNVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 619
+K M +G + D ++ L RA + E ++L+ P+ + FT ++
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCS 436
Query: 620 QSNYEKAVALINAMA 634
+ + A+ + N M
Sbjct: 437 NGSMDDAMRVFNKMC 451
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 176/429 (41%), Gaps = 54/429 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
++ G G +A+ +L G+ L ++ +++ L +GR EA +F
Sbjct: 275 IIMGFAKSGDPSKALQLL----GMAQATGLSAKTATLVSIISALADSGRTLEAEALFE-E 329
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKN 305
L + P AY+++ + G LK+ ++ M ++ P + ++ +
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 306 WDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
W+ ++P+ V++ +L +W+ F V K+++ G+KP Y +
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 449
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + D F +M G +T+ L+ + G+ A ME+RG
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ A+ Y + + RW D ++ K+KS + P +T T L+ G +D
Sbjct: 510 CLPCATTYNIMINSYGDQERWDDMKRLLGKMKS-QGILPNVVTHTTLVDVYGKSGRFNDA 568
Query: 475 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----------------- 516
I + MK +P+ NA++ Y++ + +A F T
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Query: 517 ----RANSSGYT---FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
R ++ + ++ +G +KPD TY+++++A +++ VY+ M +SGC+
Sbjct: 629 FGEDRRDAEAFAVLQYMKENG--VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 570 LDQTKHAWL 578
D+ + L
Sbjct: 687 PDRKARSML 695
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 19/302 (6%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F++LR+SG+KP Y ++ +++G +M K G + TY +L+ A+
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 385
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G+ A ++ ME V + V+ L + G WQ V++++KS+ KP +
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI-GVKP-D 443
Query: 456 ITFTGLIISSMDGGH-IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
F ++I + + +D ++ F M + EP+ T N ++ + ++ A+E+FE
Sbjct: 444 RQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE 503
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
R P TY+ M+ + +W+ + + M G +
Sbjct: 504 AMERRGC-------------LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINA 632
H L+ ++G+ + + + G P + LI A Q E+AV
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA-LINAYAQRGLSEQAVNAFRV 609
Query: 633 MA 634
M
Sbjct: 610 MT 611
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 156/383 (40%), Gaps = 45/383 (11%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A +V+ W+ K +Y+ L+ LG++ + +EA L+ + L P Y+
Sbjct: 150 AYAVVSWLQ--KHNLCFSYELLYSILIHALGRSEKLYEAF----LLSQKQTLTP--LTYN 201
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN-WDPV---------- 309
++ + +++ + LI +MRQ S I+++ R N D V
Sbjct: 202 ALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIE 261
Query: 310 ---LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
LE D+ + N ++ S + + +GL AT + + SG+
Sbjct: 262 RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTL 321
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F ++ +SG Y L++ + + G + +A + V ME+RGV Y L
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
N GRW+ A +V++++++ +P F+ L+ D G + + MK
Sbjct: 382 DAYVNAGRWESARIVLKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 440
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+P+ N ++ + + + A F+ R S G ++PD T++++++
Sbjct: 441 KPDRQFYNVVIDTFGKFNCLDHAMTTFD---RMLSEG----------IEPDRVTWNTLID 487
Query: 546 ASATAHQWEYFEYVYKGMALSGC 568
+ E +++ M GC
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGC 510
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 154/363 (42%), Gaps = 34/363 (9%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ D N+ ++ Y S+ +K LVK E ++ K ++ M +P D+
Sbjct: 1 MRDKNIAANVFTYSSI---------IKSLVK--EAKPEESYKVLEEMMAAGCNP----DV 45
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+N V+ S+ + V++ + +SG KP +Y + + + + GK D + +
Sbjct: 46 FAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSE 105
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G+ Y LVRA + +++ A + M + G ++YEL LC G+
Sbjct: 106 MVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGK 165
Query: 435 WQDAMLVVEKIKSL-RHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
+DA E+ K + +H +P + L+ G ++ ++F MK H C P++ T
Sbjct: 166 VKDA---SERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVT 222
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N +L + + +LFE ++GY P+ T+S+++
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAM---RAAGYV----------PNVITFSTLIHGLCRTG 269
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ E V+ M +GC+ ++ + L+ RA K F+ + +A P + +
Sbjct: 270 ELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYN 329
Query: 612 EML 614
++
Sbjct: 330 SLI 332
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 169/426 (39%), Gaps = 38/426 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G +++ +L + +++ Y+ L+ L KA R A +F+ M+
Sbjct: 86 LIHGLAKIGKLDESLKILSEMVMRGQTPSMQA---YSSLVRALAKARRVDHASSLFDEMI 142
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ +PD ++ + + L Q G +K+ S+R K M + +P++
Sbjct: 143 RGGH-HPDRLMFYELILGLCQAGKVKD-----------ASERFKQMPKHGC----QPNVP 186
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN +L+ S Q + +F +++ P TY ++ + ++ + + + F M
Sbjct: 187 VYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAM 246
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G +T+ L+ G++ +A+ +M + G Y L LC +
Sbjct: 247 RAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKV 306
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVN 493
A + EK+ + P + + LI G +D+ +++ M +P I T N
Sbjct: 307 IQARELFEKM-TQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
++ + + +A EL E L D TY ++ + A +
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKG-------------LAADSCTYRILIAGLSRATKL 412
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF--- 610
+ VYK M LD + + G F++ ++G +P+P F
Sbjct: 413 DEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 472
Query: 611 TEMLIQ 616
+E LI+
Sbjct: 473 SESLIK 478
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 164/425 (38%), Gaps = 70/425 (16%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCN------------------ 259
++DK + F Y+ ++ L K +P E+ ++ +M CN
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 260 ------LY---------PDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPS------ 295
+Y PD +YH + L ++G L E +K++ M Q PS
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 296 --KRIKNMHRKN-----WDPVLE----PD-LVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ + R + +D ++ PD L+ Y +L C + + K FKQ+ K
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLC-QAGKVKDASERFKQMPKH 179
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G +P+ Y + + + SG+ + + F +M + +TY L+ A + ++ E
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
M G V + L LC G + A+ V + KP + T+T LI
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE-AGCKPNKYTYTTLIS 298
Query: 464 SSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ +F+ M C P+ N+++ Y + +A++L+ E
Sbjct: 299 GLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE-------- 350
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+SG GA L+P T++++++ + + M G D + L+
Sbjct: 351 ---MSG-GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGL 406
Query: 583 SRAGK 587
SRA K
Sbjct: 407 SRATK 411
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 111/503 (22%), Positives = 194/503 (38%), Gaps = 81/503 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH-EALRIFNLM 254
L+ G G+WRQA+ V + DL V ++ K+GR + +AL F LM
Sbjct: 219 LINACGSSGNWRQALEVCKKMTDNGVGPDL----VTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---------RIKNMHR-- 303
+ + PD ++ + L ++G + + + MR K ++ I +++
Sbjct: 275 -KGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVR 333
Query: 304 ---KNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+N V E P++V YNA++ A + VF ++++G+ P +Y
Sbjct: 334 GEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSY 393
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ +S + E F M K +TY L+ A+ G + EAV R MEQ
Sbjct: 394 TSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 413 RGV-VGTASVYYELACC----------------------------------LCNNGRWQD 437
G SV LA C N +
Sbjct: 454 DGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 513
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAML 496
A+ + + ++ + K +TFT LI S + IS + M+D P V +++L
Sbjct: 514 AIALYQTMRK-KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 572
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
YS+ ++A+ +F + A KPD Y+SML A + +W
Sbjct: 573 CAYSKQGQVTEAESIFNQMKMAGC-------------KPDVIAYTSMLHAYNASEKWGKA 619
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP-LFFTEMLI 615
++ M +G + D + L+ ++ G+ + D L+ E+P F E+
Sbjct: 620 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD-LMREKEVPFTGAVFFEIFS 678
Query: 616 QAIVQSNYEKAVALINAM-AYAP 637
+++A+ LI M Y P
Sbjct: 679 ACNTLQEWKRAIDLIQMMDPYLP 701
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 148/347 (42%), Gaps = 24/347 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD Y+A++NA + QW+ + + ++ + PS +TY + SG + E
Sbjct: 175 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALE 234
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+KM +G +T+ +++ A+ + ++A++ M+ V + + + CL
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 294
Query: 431 NNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
G+ A+ V ++ R +P +TFT ++ G I++C ++F+ M + +PN
Sbjct: 295 KLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPN 354
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTR-------------ANSSGYTFLSGDGAPL-- 533
I + NA++ Y+ + M A +F + R NS G + G +
Sbjct: 355 IVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFL 414
Query: 534 -------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
KP+ TY+++++A + +++ M G + + LL SR+
Sbjct: 415 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSK 474
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
K +E + G + + + I + EKA+AL M
Sbjct: 475 KKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTM 521
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 63/142 (44%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VY++VL A Q +F Q++ +G KP Y + S K+ E F +M
Sbjct: 567 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G ++ L+RAF + G+ + + M ++ V T +V++E+ W
Sbjct: 627 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEVPFTGAVFFEIFSACNTLQEW 686
Query: 436 QDAMLVVEKIKSLRHSKPLEIT 457
+ A+ +++ + S + +T
Sbjct: 687 KRAIDLIQMMDPYLPSLSIGLT 708
>gi|218194011|gb|EEC76438.1| hypothetical protein OsI_14128 [Oryza sativa Indica Group]
Length = 669
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 137/343 (39%), Gaps = 36/343 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR +F M + PD A Y+ + G G KE+V+L +
Sbjct: 159 TYRVLLDLYGRQGRFDGVRELFREM--RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQD 216
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +H + +EPD+ V+ AC + V + G+ P+A
Sbjct: 217 M----------LHSE-----VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTA 261
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y +E + + Y+ + F M + G TY L AF + G EA A
Sbjct: 262 KAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSR 321
Query: 410 MEQRGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M + ++ L C + DA+ +++ R + P E + G++ +
Sbjct: 322 MTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFN-PDERSLEGVLNAYCIA 380
Query: 469 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTF 525
G ID+ F+ ++ P+I ML +Y+RND ++ A +L EE T RA+S+
Sbjct: 381 GVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVI 440
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
A + EY S W+ EYV L GC
Sbjct: 441 -----ASMIKGEYDDDS---------NWQMVEYVLDNSNLEGC 469
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 152/391 (38%), Gaps = 49/391 (12%)
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
L+ L MR PS P + PDL YN +L A + + + +
Sbjct: 33 LLGLFAEMRHDPS------------PSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLE 80
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
+G+ P A+Y ++ +G V E F +MA +G Y L+ A G E
Sbjct: 81 AGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMAATGHTPDPSAYLGLMEAHTRVGATAE 140
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGL 461
AVA +R M+ G TA+ Y L GR+ V E + +R + P + T+ L
Sbjct: 141 AVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDG---VRELFREMRTTVPPDTATYNVL 197
Query: 462 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
DGG + + +FQ M EP+I T ++ R + A+E+ +
Sbjct: 198 FRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLD------- 250
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
+++ +G + P Y+ ++EA A +E + M G + L
Sbjct: 251 ----YITTEG--MVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNAL-- 302
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 640
A+ K L + A EA F+ M A +Q + + ALI AY
Sbjct: 303 -ANAFAKGGLFQEA-----EA-------IFSRMTNNAAIQKDKDSFDALIE--AYCQGAQ 347
Query: 641 TERQWTELFESNEDRISRDK--LEKLLNALC 669
+ E + R + D+ LE +LNA C
Sbjct: 348 LDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 378
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 115/303 (37%), Gaps = 25/303 (8%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSG----KYDLVHEFFRKM---AKSGEAIGALTYKVLVR 392
++ SG+ P+AATY + ++ +D++ F +M TY L+
Sbjct: 1 MKASGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLA 60
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
A +++ +R M + GV+ + Y + G + ++ + H+
Sbjct: 61 AAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMAATGHT- 119
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P + GL+ + G + +++ + M+ D C P T +L +Y R F +EL
Sbjct: 120 PDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVREL 179
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F E + PD TY+ + ++ +++ M S + D
Sbjct: 180 FREMRTT--------------VPPDTATYNVLFRVFGDGGFFKEVVELFQDMLHSEVEPD 225
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALI 630
++V R G D + G +P +T L++A+ + YE+A
Sbjct: 226 IDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTG-LVEALGHAAMYEEAYVAF 284
Query: 631 NAM 633
N M
Sbjct: 285 NMM 287
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 155/404 (38%), Gaps = 36/404 (8%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL + L + D + + L + GK G EAL +F+ M+++ P++ Y
Sbjct: 119 AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIG---EALHLFDKMIDE-GFQPNVVTYG 174
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +VG ++L+ M Q +PD+V+Y +++++
Sbjct: 175 TLINGLCKVGNTSAAIRLLRSMEQGNC---------------QPDVVIYTSIIDSLCKDR 219
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
Q F +F Q+ G+ P TY + + ++ V +M S + +
Sbjct: 220 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 279
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+V A +EGK+ EA V M QRGV Y L C +A+ V + +
Sbjct: 280 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR- 338
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ P I++T LI ID + +F+ M + P+ T N ++
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A LF E PD TYS +L++ E + K + S
Sbjct: 399 AIALFHEMVARGQ-------------MPDLVTYSILLDSLCKNRHLEEAMALLKAIEASN 445
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
D + ++ RAG+ F +L G HP +T
Sbjct: 446 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG--LHPSVWT 487
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 131/318 (41%), Gaps = 35/318 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F YT L+ L + N M+ + + PD+ + +V L + G + E ++++
Sbjct: 241 FTYTSLVHALCNLCEWKHVTTLLNQMV-NSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 299
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKP 347
M Q+ +EPD+V Y +++ C+ S + V VF + + G P
Sbjct: 300 MMIQRG---------------VEPDVVTYTTLMDGHCLQSEMDEAVK-VFDMMVRKGFAP 343
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+Y + + K D F +M + TY L+ G++ +A+A
Sbjct: 344 DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALF 403
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM- 466
M RG + Y L LC N ++AM +++ I++ + +++ +II M
Sbjct: 404 HEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY--NIIIDGMC 461
Query: 467 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G ++ +F ++ P++ T N M+ + + ++A +LF E
Sbjct: 462 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM---------- 511
Query: 526 LSGDGAPLKPDEYTYSSM 543
DG PD TY+++
Sbjct: 512 ---DGNDCSPDGCTYNTI 526
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 137/393 (34%), Gaps = 51/393 (12%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V + +L + + V + Q+ G+ P+ T + + +
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G T+ L+R EGKI EA+ M G Y L LC
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
G A I+ LR SM+ G +C+P++
Sbjct: 183 VGNTSAA------IRLLR---------------SMEQG--------------NCQPDVVI 207
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+++ ++ ++A LF + G + PD +TY+S++ A
Sbjct: 208 YTSIIDSLCKDRQVTEAFNLFSQMV-------------GQGISPDIFTYTSLVHALCNLC 254
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+W++ + M S D + ++ + GK D +++ G P + +T
Sbjct: 255 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 314
Query: 612 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 671
++ +QS ++AV + + M F +T L DK L +C
Sbjct: 315 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 374
Query: 672 NAASSEITVSNLSRALHALCRSEKERDLSSSAH 704
T + L ++ LC + +D + H
Sbjct: 375 EWIPDTKTYNTL---MYGLCHVGRLQDAIALFH 404
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/422 (17%), Positives = 156/422 (36%), Gaps = 59/422 (13%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P++ N ++N+ ++ F V ++ K G +P T+ + + GK
Sbjct: 96 VPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 155
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ----------------- 412
F KM G +TY L+ + G + A+ +R+MEQ
Sbjct: 156 HLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSL 215
Query: 413 ------------------RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-- 452
+G+ Y L LCN W+ V + + +SK
Sbjct: 216 CKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKH---VTTLLNQMVNSKIL 272
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P + F+ ++ + G + + I M + EP++ T ++ + +A ++
Sbjct: 273 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 332
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F+ R PD +Y++++ H+ + Y+++ M D
Sbjct: 333 FDMMVRKG-------------FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD 379
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
+ L+ G+ F ++ G++P + ++ +L + E+A+AL+
Sbjct: 380 TKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLK 439
Query: 632 AMAYAPFHITERQWTELFESNEDRISR-DKLEKLLNALCNCNAASSEITVSNLSRALHAL 690
A+ + + +++ D + R +LE + N ++ +V + +H L
Sbjct: 440 AIEASNLNPD----IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 495
Query: 691 CR 692
C+
Sbjct: 496 CK 497
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 85/215 (39%), Gaps = 16/215 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K + +A+ +F M PD Y+++ L VG L++ + L M
Sbjct: 348 YTTLINGYCKIHKIDKAMYLFEEMCRK-EWIPDTKTYNTLMYGLCHVGRLQDAIALFHEM 406
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ PDLV Y+ +L++ + + + K + S L P
Sbjct: 407 VARGQM---------------PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQ 451
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + ++ M ++G+ + + F ++ G TY +++ + G +NEA M
Sbjct: 452 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+ Y +A N A+ ++E++
Sbjct: 512 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/530 (18%), Positives = 208/530 (39%), Gaps = 72/530 (13%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+R LV LS ++ + M++SG + L +G W A+
Sbjct: 205 YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL 264
Query: 211 SVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN-LYPDIAAYH 268
+++ + D K + T +++ L +A EA+ + M CN P++ Y
Sbjct: 265 DMIE-------REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM--RCNSCIPNVVTYR 315
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +++ + KRI NM P+ ++N+++++
Sbjct: 316 TL------------LSGFLKKKQLGWCKRIINMMMTEG---CNPNPSLFNSLVHSYCNEK 360
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY------DLVHEFFRKMAKSGEAI 382
+ + + ++ G P Y + + + K DL + + +M + +
Sbjct: 361 DYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVL 420
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ R GK ++A ++ M ++G V S Y ++ LC+ + + A L+
Sbjct: 421 NKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 480
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR 501
+++K + P T+T LI S G I+ +F+ M+ C P + T A++ Y +
Sbjct: 481 QEMK-MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 539
Query: 502 -------NDMF----------------------------SKAKELFEE---TTRANSSGY 523
ND+F SKA E++ + T+ + S +
Sbjct: 540 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 599
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
F D L P+ TY ++++ AH+ ++ + M SGC+ + + L+
Sbjct: 600 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 659
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+AGK + F + + G +P +T ++ + + A+ +++ M
Sbjct: 660 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 709
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 102/233 (43%), Gaps = 3/233 (1%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ KA + +A IF+ M+ D P+ Y ++ L + G + + ++ ++
Sbjct: 530 YTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 588
Query: 291 RQKPSKRIKNMHRKNWDP-VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + D L P++V Y A+++ +H+ + + SG +P+
Sbjct: 589 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 648
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ ++GK D E F +M K G TY L+ +++G+++ A+ +
Sbjct: 649 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 708
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
M + Y + LC G + A+ ++ ++ + P +T+T LI
Sbjct: 709 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE-KGCSPNVVTYTALI 760
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/386 (17%), Positives = 141/386 (36%), Gaps = 53/386 (13%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L G+ +A ++ M+ PD + Y V L +++ L + M+
Sbjct: 432 LCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG--- 487
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ PD+ Y ++++ + + W+F+++R G P+ TY +
Sbjct: 488 ------------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 535
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
L++ + ++ F +M +G +TY LV + G I++A +
Sbjct: 536 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 595
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCIS 476
+ Y+ C + RH+ P +T+ L+ +D
Sbjct: 596 DSDFYFP-----CED----------------RHTLAPNVVTYGALVDGLCKAHKVDHAHE 634
Query: 477 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ M CEPN +A++ + + A+E+F + T+ GY P
Sbjct: 635 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC---GYL----------P 681
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
+TY+S+++ + + V M C + + ++ R G+
Sbjct: 682 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 741
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQS 621
+ E G P+ + +T LI + QS
Sbjct: 742 SLMEEKGCSPNVVTYTA-LIDGLGQS 766
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 53/252 (21%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N ++ C W +L+ G +PS TY ++V+ +G+ DL ++M++
Sbjct: 178 NVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSE 237
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
SG + T A LC GRW D
Sbjct: 238 SGFCMDRFTVGCFAHA-----------------------------------LCKEGRWAD 262
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAML 496
A+ ++E+ K + T +I M+ + D+ +S M+ + C PN+ T +L
Sbjct: 263 ALDMIER----EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 318
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
+ + K + + +G P+ ++S++ + + Y
Sbjct: 319 SGFLKKKQLGWCKRII-----------NMMMTEGC--NPNPSLFNSLVHSYCNEKDYAYA 365
Query: 557 EYVYKGMALSGC 568
+ M GC
Sbjct: 366 YKLLNRMTTCGC 377
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 136/328 (41%), Gaps = 31/328 (9%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+D + F Y ++A + +AGR +A+ +F+ M E L P+ Y+++ + G
Sbjct: 188 RDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVL-PNHITYNTMIDGHIKGGD 246
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L+ L ++M L+P+ + YN +L+ + + + +
Sbjct: 247 LEAGFSLRDQMVCHG---------------LKPNAITYNVLLSGLCRAGRMGETSALLDE 291
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + P TY + + + ++G + F K K+G IG T +L+ ++GK
Sbjct: 292 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGK 351
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
++ A ++++ G+V T +Y L C G + A ++KS RH KP IT+
Sbjct: 352 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS-RHIKPDHITYN 410
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI I + + M+D+ P + T N ++ Y R K + E
Sbjct: 411 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 470
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
LKP+ +Y S++ A
Sbjct: 471 G-------------LKPNVVSYGSIVNA 485
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 162/392 (41%), Gaps = 45/392 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G + ++LD + ++ + F Y+ L L + G L +F L
Sbjct: 272 LLSGLCRAGRMGETSALLDE---MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSL 328
Query: 256 EDCNLYPDIAAYHSVAVTL------GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
++ D ++ ++ L G+V + +E+++ + P++ I N +
Sbjct: 329 KNGVTIGD----YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 384
Query: 310 -----------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
++PD + YNA++N + + + +++ +G+ P+ T+
Sbjct: 385 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 444
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
++ ++G+ + +M ++G ++Y +V AF + GKI EAVA + +M
Sbjct: 445 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 504
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+ V+ A VY + +G A ++VEK+KS P +T+ LI + I
Sbjct: 505 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS-NGISPSIVTYNLLIKGLCNQSQIS 563
Query: 473 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ I + +H P+ + N ++ KA +L + R + G
Sbjct: 564 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ---RMHKYG--------- 611
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+K TY ++ A + EY+Y+ M
Sbjct: 612 -IKSTVRTYHQLISGLGGAGRLIEMEYLYQKM 642
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 135/321 (42%), Gaps = 39/321 (12%)
Query: 233 KLLAILGKA----GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
K LAIL + G+PH A+R F M E + D+ ++++ LL L K
Sbjct: 140 KTLAILAERYASNGKPHRAVRTFLSMAEH-GIRQDLHSFNT---------LLDILCK--- 186
Query: 289 RMRQKPSKRIKNMHR--KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
SKR++ H K PD V YN + N + V K++ + G++
Sbjct: 187 ------SKRVETAHSLLKTLTSRFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIE 240
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ +S + EF+ +M K I +TY ++ F G + +A
Sbjct: 241 PTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRV 300
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M + GVV + Y L LC ++A++V E++ P +T+ +I
Sbjct: 301 FHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLC 360
Query: 467 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G ++ + + M +H + T N +++ + KA E+F +
Sbjct: 361 HVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKM---------- 410
Query: 526 LSGDGAPLKPDEYTYSSMLEA 546
GDG+ L P+ TY+ ++ A
Sbjct: 411 --GDGSCL-PNLDTYNVLISA 428
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 113/270 (41%), Gaps = 25/270 (9%)
Query: 150 RWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
R+R + +L + + T + ++ M Q G+ T +LKG ++A
Sbjct: 203 RFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEA 262
Query: 210 MSVLDWVYGLK-DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
W + L+ KR + V YT ++ G AG +A R+F+ M+++ + P++A Y
Sbjct: 263 -----WEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKE-GVVPNVATY 316
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+++ L + ++ V + E M + + V P++V YN V+
Sbjct: 317 NALIQVLCKKDSVENAVVVFEEMAR--------------EGVCVPNVVTYNVVIRGLCHV 362
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ +++ + GL+ TY + + +G+ + E F KM TY
Sbjct: 363 GDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTY 422
Query: 388 KVLVRAFWEEGKINEAVAA---VRNMEQRG 414
VL+ A + K + V A + +M RG
Sbjct: 423 NVLISAMFVRKKSEDLVVAGKLLMDMVDRG 452
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ Y +V G G +K+ ++ M ++ + P++ YNA++
Sbjct: 277 DVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEG---------------VVPNVATYNALIQ 321
Query: 323 ACVPSHQWKGVFWVFKQLRKSGL-KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ VF+++ + G+ P+ TY + + + G + F +M + G
Sbjct: 322 VLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLR 381
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
TY V++R F + G++ +A+ M + Y L + + +D ++
Sbjct: 382 ACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVA 441
Query: 442 VEKIKSL--RHSKPLEITF----TGLIISS 465
+ + + R P + TF GL+I+
Sbjct: 442 GKLLMDMVDRGFLPRKFTFNRVLNGLVITG 471
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/478 (20%), Positives = 191/478 (39%), Gaps = 53/478 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ L + GR +AL + + M+E+ PD Y ++ + ++G + V + +
Sbjct: 13 FTTLMNGLCREGRVLQALALVDRMVEE-GHQPDAVTYGTIVNGMCKLG---DTVSALNML 68
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R+ +IK ++V+Y+A+++ +F ++ + G+ P+
Sbjct: 69 RKMDESQIK------------ANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVL 116
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ GK+ + R M + +T+ L+ AF +EGK++ A R M
Sbjct: 117 TYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREM 176
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-- 468
+R + T Y + C + R +DA + + + S + P IT LI DG
Sbjct: 177 LRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVS-KGCSPDIITLNTLI----DGCC 231
Query: 469 -------------GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G+++ +FQ M + P+I T N +L N KA E+F+
Sbjct: 232 RAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKV 291
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
++ + D A + M + + W+ F + ++G + D
Sbjct: 292 FQKSK------MDLDTATCN---IIINGMCKGNKVDEAWDLF----NSLPVNGVETDVVT 338
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ L+ + G E + +L G IP + + M+ Q+ E+A ++++M
Sbjct: 339 YNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMV 398
Query: 635 YAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
++ L + D +L + +C + IT + L +H C+
Sbjct: 399 SEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNAL---IHGFCK 453
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 139/333 (41%), Gaps = 28/333 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ Y+ ++ K R +A +F+LM+ PDI +++ G + L
Sbjct: 184 TTITYSSMIDGFCKHSRLEDAKHMFDLMVSK-GCSPDIITLNTLID-----GCCRAKRHL 237
Query: 287 IERMRQKPSKRI-KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
I Q + + +++ ++ + PD+V N +L + + + +FK +KS +
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
AT + + M + K D + F + +G +TY +L+ F +EG A
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
M +G++ + Y + C R ++A +V+ + S P +TF+ LI
Sbjct: 358 IYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVS-EGCSPDVVTFSTLIKGY 416
Query: 466 MDGGHIDDCISIFQHMKDHCE----PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G +DD + +F M C+ + T NA++ + + + A+++FEE SS
Sbjct: 417 CKAGRVDDGLELFSEM---CQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMV---SS 470
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
G PD T+ SML T + +
Sbjct: 471 GVC----------PDTITFRSMLAGLCTKAELQ 493
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/478 (19%), Positives = 192/478 (40%), Gaps = 61/478 (12%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T G ++ + LGD +S L+ + + + + + +Y+ ++ L K G +A
Sbjct: 47 TYGTIVNGMCKLGD------TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQ 100
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
IF M E ++P++ Y+ + G + +L+ ++M +N DP
Sbjct: 101 NIFTEMHEK-GIFPNVLTYNCMIDGYCSYGKWSDAEQLL-----------RDMIERNIDP 148
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
D+V ++A++NA V + G +++++ + + P+ TY ++ + + +
Sbjct: 149 ----DVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDA 204
Query: 369 HEFFRKMAKSGEAIGALTYKVLV-----------RAFWEEGKINEAVAAVRNMEQRGVVG 417
F M G + +T L+ F + G +N A + M GV
Sbjct: 205 KHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSP 264
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLIISSM-DGGHIDDCI 475
L LC NG+ + A+ E K + SK L+ +II+ M G +D+
Sbjct: 265 DIVTCNTLLAGLCENGKLEKAL---EMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAW 321
Query: 476 SIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE---------TTRANSSGYTF 525
+F + + E ++ T N ++ V+ + F +A++++ E T NS F
Sbjct: 322 DLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGF 381
Query: 526 LSGD-------------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
+ PD T+S++++ A + + ++ M G D
Sbjct: 382 CKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADT 441
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
+ L+ + G + + F+ ++ +G P + F ML ++ +K + ++
Sbjct: 442 ITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTML 499
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 104/256 (40%), Gaps = 20/256 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL + G +A+ + K K DL + ++ + K + EA +FN +
Sbjct: 272 LLAGLCENGKLEKALEMFKVFQ--KSKMDLDTA-TCNIIINGMCKGNKVDEAWDLFNSLP 328
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + D+ Y+ + +G+ +++ R ++++ + + P V
Sbjct: 329 VN-GVETDVVTYNIL------IGVF---------VKEGNFLRAEDIYLEMLCKGIIPSTV 372
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN++++ ++ + + + G P T+ ++ ++G+ D E F +M
Sbjct: 373 TYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEM 432
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +TY L+ F + G +N A M GV + + LC
Sbjct: 433 CQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAEL 492
Query: 436 QDAMLVVEKI-KSLRH 450
Q + ++E + KS+ H
Sbjct: 493 QKGLTMLEDLQKSVDH 508
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 97/250 (38%), Gaps = 38/250 (15%)
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M ++G +T+ L+ EG++ +A+A V M + G A Y + +C G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSM------DGGHIDDCISIFQHMKDH-CEP 487
V + LR +I +I S++ DG HI +IF M + P
Sbjct: 61 ------TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKA-QNIFTEMHEKGIFP 113
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTFLSGDGAPLK----------- 534
N+ T N M+ Y +S A++L + N TF + A +K
Sbjct: 114 NVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELY 173
Query: 535 ---------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
P TYSSM++ + E ++++ M GC D L+ RA
Sbjct: 174 REMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRA 233
Query: 586 GKCHLLEHAF 595
+ HL+ H F
Sbjct: 234 KR-HLI-HGF 241
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/381 (19%), Positives = 161/381 (42%), Gaps = 30/381 (7%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+A L ++ R +A R+ M P +AY V +G + ++ + +E +RQ
Sbjct: 147 LVATLVRSRRLEDAFRVIGAM-RHLKFRPPFSAY---TVLIGALAEARQPERALELLRQM 202
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
D E + ++ ++ A Q + + +++ S L+P Y
Sbjct: 203 ------------QDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYN 250
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ ++ ++G D+ +FF ++ G ++Y +V + G++ EA ME
Sbjct: 251 VCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAE 310
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
V A Y + + R+ DA ++E+++ R P ++F ++ +D+
Sbjct: 311 RDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRE-RGCIPSVVSFNSILTCLGKKRKVDE 369
Query: 474 CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+++F MK +PNI T N ++ + ++A ++ +E A L
Sbjct: 370 ALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAG-------------L 416
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 593
P+ + + M++ A+Q E +++ + GC + + L+ + GK
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYR 476
Query: 594 AFDSLLEAGEIPHPLFFTEML 614
F+ +L+AG +P+ +T ++
Sbjct: 477 LFEKMLDAGHDANPIIYTSLI 497
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/472 (19%), Positives = 190/472 (40%), Gaps = 66/472 (13%)
Query: 150 RWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
++R A VL+ L+E + + +R M G + L++ L +G A
Sbjct: 171 KFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPA 230
Query: 210 MSVLDWV------------------YGLKDKRDLKSRFV--------------YTKLLAI 237
++++D V +G D+ +F YT ++ +
Sbjct: 231 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWV 290
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L KAGR EA +F M + ++ P AY+++ + G + KL+ER+R++
Sbjct: 291 LCKAGRLGEAEELFGQMEAERDV-PCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCI- 348
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
P +V +N++L + +F ++K KP+ +TY + ++
Sbjct: 349 --------------PSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIID 393
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
++ +G+ + ++ +M +G L+ ++V + ++ EA + +RG
Sbjct: 394 MLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNP 453
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRH-SKPLEITFTGLIISSMDGGHIDDCIS 476
+ Y L L G+ DA + EK+ H + P I +T LI + G +D
Sbjct: 454 NSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP--IIYTSLIRNFFMHGRKEDGHK 511
Query: 477 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
I++ M + P++ +N + + K + +FE+ + FL P
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDM-----KSFGFL--------P 558
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
D +YS ++ A Q +++ M+ G LD + ++ ++GK
Sbjct: 559 DVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 187/479 (39%), Gaps = 83/479 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G + A +L+ L+++ + S + +L LGK + EAL +F++M
Sbjct: 322 MIMGYGSAERFDDAYKLLER---LRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK 378
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P+I+ Y+ + L G + E K+ + M L P+L+
Sbjct: 379 KDAK--PNISTYNIIIDMLCMAGRVNEAYKIRDEMELAG---------------LFPNLL 421
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ ++Q + +F+ + G P++ TY ++ + + GK D + F KM
Sbjct: 422 SVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM 481
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G + Y L+R F+ G+ + + M +RG ++ C+ G
Sbjct: 482 LDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEV 541
Query: 436 QDAMLVVEKIKS---LRHSKPLEITFTGL-----------IISSM--------------- 466
+ + E +KS L + I GL I +M
Sbjct: 542 EKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAV 601
Query: 467 -DG----GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
DG G +D + + MK H P + T +++ ++ D +A LFEE A S
Sbjct: 602 VDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE---AKS 658
Query: 521 SGY--------TFLSGDG-----------------APLKPDEYTYSSMLEASATAHQWEY 555
G + + G G L P+ YT++S+++A + +
Sbjct: 659 KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ M C + ++ L+ R K + + + + G IP+ + +T M+
Sbjct: 719 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMI 777
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/473 (19%), Positives = 181/473 (38%), Gaps = 70/473 (14%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
++ ++VDRL + + + ++ G L+ GLG KG A + +
Sbjct: 422 SVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE-- 479
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE--------------DC---- 258
+ D + +YT L+ GR + +I+ M+ DC
Sbjct: 480 -KMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKA 538
Query: 259 ----------------NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
PD+ +Y + L + G +E + + M Q+
Sbjct: 539 GEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQG-------- 590
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
D YNAV++ S + + V ++++ + P+ ATYG ++ + +
Sbjct: 591 -------FALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKI 643
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+ D + F + G + + Y L+ F + G+I+EA + M ++G+ +
Sbjct: 644 DRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 703
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 481
L L +A++ + +K ++ S P T++ LI + +Q M
Sbjct: 704 NSLMDALVKTEEIDEALICFQSMKEMKCS-PNTYTYSILINGLCRVQKYNKAFVFWQEMQ 762
Query: 482 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
K PN+ T M+ ++ + A LFE F + G PD +++
Sbjct: 763 KQGLIPNVVTYTTMISGLAKVGNITDAYSLFER----------FKTNGGI---PDSASFN 809
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
+++E + A++ V++ L GC+L+ K L++A +C LE A
Sbjct: 810 ALIEGMSNANRPMEAYQVFEETRLRGCRLN-VKTCISLLDALNKTEC--LEQA 859
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 135/318 (42%), Gaps = 30/318 (9%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD YH + +G+ +++++K+ E M K K V YN ++
Sbjct: 102 PDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKST---------------YVTYNTII 146
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ V S ++ QL G P+ TYG ++ +L+ G + F +M + G
Sbjct: 147 SGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCE 206
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
Y +L+ + G + +M ++G+ Y + LC +GR D +
Sbjct: 207 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 266
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
+++ + +P IT+ LI G +++ +S++ M K PN+ T N+++
Sbjct: 267 FKQLTDM-GLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLG 325
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ ++A +++EE + G+ KP+ +TY++++ + + E Y
Sbjct: 326 KAGKAAEAGKMYEELL---AKGW----------KPNVFTYNALIRGYSVSGSPENAFAAY 372
Query: 561 KGMALSGCQLDQTKHAWL 578
M + GC+ + + + L
Sbjct: 373 GRMIVGGCRPNSSTYMQL 390
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 110/282 (39%), Gaps = 20/282 (7%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E H K ++S ++ L + +M + + G T LL GL
Sbjct: 129 EMH-NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKD 187
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G+ A ++ D + + + +Y LL AG + +F M+E + PD
Sbjct: 188 GNIEDAEALFDEMLECGCEPNCA---IYNILLNGYRIAGDTEKVCELFESMVEQ-GMNPD 243
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
I +Y V TL G L + + +++ D LEPDL+ YN +++
Sbjct: 244 IKSYTVVIDTLCADGRLNDGLSYFKQLT---------------DMGLEPDLITYNLLIHG 288
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
S + + ++ + K G+ P+ TY + + ++GK + + ++ G
Sbjct: 289 LGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPN 348
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
TY L+R + G A AA M G +S Y +L
Sbjct: 349 VFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 390
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 121/316 (38%), Gaps = 24/316 (7%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ K+ G+ +Y + ++ D+ E F +M + G TY +++ A
Sbjct: 56 LVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMG 115
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ +I + + M +G T Y + L + +A+ + ++ S S P
Sbjct: 116 KSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFS-PTP 174
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE- 513
T+ L+ + G+I+D ++F M + CEPN N +L Y K ELFE
Sbjct: 175 CTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFES 234
Query: 514 ---ETTRANSSGYTF----LSGDG--------------APLKPDEYTYSSMLEASATAHQ 552
+ + YT L DG L+PD TY+ ++ + +
Sbjct: 235 MVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGR 294
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
E +Y M G + + L++ +AGK ++ LL G P+ +
Sbjct: 295 LEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNA 354
Query: 613 MLIQAIVQSNYEKAVA 628
++ V + E A A
Sbjct: 355 LIRGYSVSGSPENAFA 370
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/502 (21%), Positives = 192/502 (38%), Gaps = 76/502 (15%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
F E ++KLL G + +++ L+ L +K + TKL+ +A
Sbjct: 76 FRETHLMKLLNRSCKAGKFNESLYFLEC---LVNKGYTPDVILCTKLIKGFFNFKNIEKA 132
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
R+ ++ + + PD+ AY++V +V ++ +++ RM+ +
Sbjct: 133 SRVMEIL--ESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARG------------- 177
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD- 366
PD+V YN ++ + + V QL P+ TY + +E + G +
Sbjct: 178 --FLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINE 235
Query: 367 ---LVHE---------------FFRKMAKSG------EAIGALT----------YKVLVR 392
L+ E R M K G E I +LT Y +L+R
Sbjct: 236 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLR 295
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
AF +GK +E V M RG Y L LC GR +A+ V+ K+ +
Sbjct: 296 AFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVL-KVMIEKELT 354
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P ++ LI + G +D I I +M + C P+I N +L +N ++A E+
Sbjct: 355 PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEI 414
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F + L G G P P+ +Y++M+ A + + M G D
Sbjct: 415 FNK-----------LRGMGCP--PNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPD 461
Query: 572 QTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
+ + L+ R G L+E A D + ++G P + + +L+ + A+
Sbjct: 462 EITYNSLISCLCRDG---LVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 518
Query: 629 LINAMAYAPFHITERQWTELFE 650
+ M E + L E
Sbjct: 519 MFAEMIEKGCRPNETTYILLIE 540
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 93/221 (42%), Gaps = 19/221 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L +G A+ ++D++ D+ + Y +LA L K G ++AL IFN L
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVN---YNTILAALCKNGNANQALEIFN-KL 418
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P++++Y+++ L G + ++ M K ++PD +
Sbjct: 419 RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG---------------IDPDEI 463
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN++++ + + + +SG +P+ +Y + + + + + D F +M
Sbjct: 464 TYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEM 523
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ G TY +L+ G EA+ ++ R V+
Sbjct: 524 IEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 121/284 (42%), Gaps = 18/284 (6%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
VF++ ++ GL PS TYG + + + GK E ++M +G TY +L+ F
Sbjct: 75 VFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFL 134
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ A A ++ + G+ +Y + C G+ A+ V++++ RH KP
Sbjct: 135 KLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH-KPTT 193
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
TF +I G + + +F M+ C P + T NA++ KA+++ +E
Sbjct: 194 RTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDE 253
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT-AHQWEYFEYVYKGMALSGCQLDQT 573
T A S P+E+TY++++ A+ + F Y K + G QLD
Sbjct: 254 MTLAGVS-------------PNEHTYTTIMHGYASLGDTGKAFAYFTK-LRDEGLQLDVY 299
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+ LL ++G+ A + A IP F +LI
Sbjct: 300 TYEALLKACCKSGRMQ-SALAVTKEMSAQNIPRNTFIYNILIDG 342
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 140/352 (39%), Gaps = 46/352 (13%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKPSKRIKNMHR 303
A IF +++D + PD+ Y+++ +G + VK +++ R KP+ R
Sbjct: 142 AFAIFEDLIKD-GIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTR------ 194
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
+ +++ + K VF +R SG P+ TY + +++
Sbjct: 195 ------------TFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKR 242
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
K + + +M +G + TY ++ + G +A A + G+ Y
Sbjct: 243 KMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYE 302
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG----GHIDDCISIFQ 479
L C +GR Q A+ V +++ + + P ++I DG G + + + Q
Sbjct: 303 ALLKACCKSGRMQSALAVTKEMSA--QNIPRNTFIYNILI---DGWARRGDVWEAADLMQ 357
Query: 480 HMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
MK + +P+I T + + S+ +A + EE +KP+
Sbjct: 358 QMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVG-------------VKPNVK 404
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE-ASRAGKCH 589
TY++++ A A E ++ M LSG + D+ + L+ SRA H
Sbjct: 405 TYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAH 456
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/344 (18%), Positives = 132/344 (38%), Gaps = 40/344 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y ++ G + L +F ++C L P + Y + ++G + + +++ +
Sbjct: 55 IYHTMMDGYTMVGDEDKCLLVFE-RFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKE 113
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K ++ Y+ ++N + W F +F+ L K G+KP
Sbjct: 114 MEHAGIKH---------------NMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDV 158
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y + GK D ++M K T+ ++ F +G++ +A+
Sbjct: 159 VLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDM 218
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M G + T Y L L + + A +++++ +L P E T+T ++ G
Sbjct: 219 MRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEM-TLAGVSPNEHTYTTIMHGYASLG 277
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ F ++D + ++ T A+LK ++ A + +E + N TF+
Sbjct: 278 DTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYN 337
Query: 529 ---DG-------------------APLKPDEYTYSSMLEASATA 550
DG ++PD +TY+S + A + A
Sbjct: 338 ILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKA 381
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 117/280 (41%), Gaps = 15/280 (5%)
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+F++ + ++ A+ Y ++ A+ + +++A A VR ME+ G+ +Y+ +
Sbjct: 5 WFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYT 64
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 489
G +LV E+ K + P IT+ LI G + + + + M+ + N+
Sbjct: 65 MVGDEDKCLLVFERFKECGLN-PSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNM 123
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T + ++ + + ++ A +FE+ + DG +KPD Y++++ A
Sbjct: 124 KTYSMLINGFLKLKDWANAFAIFEDLIK-----------DG--IKPDVVLYNNIITAFCG 170
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + K M + ++ +R G+ FD + +G IP
Sbjct: 171 MGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHT 230
Query: 610 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
+ +++ + + EKA +++ M A E +T +
Sbjct: 231 YNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 270
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 71/190 (37%), Gaps = 19/190 (10%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
T K + + + GL LLK G + A++V + R+ F+
Sbjct: 279 TGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRN---TFI 335
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ + G EA + M + + PDI Y S + G ++ K IE M
Sbjct: 336 YNILIDGWARRGDVWEAADLMQQMKRE-GVQPDIHTYTSFINACSKAGDMQRATKTIEEM 394
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ K P++ Y ++N + + F++++ SGLKP A
Sbjct: 395 KSVGVK---------------PNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRA 439
Query: 351 TYGLAMEVML 360
Y M +L
Sbjct: 440 VYHCLMTSLL 449
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 135/318 (42%), Gaps = 30/318 (9%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD YH + +G+ +++++K+ E M K K V YN ++
Sbjct: 799 PDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKST---------------YVTYNTII 843
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ V S ++ QL G P+ TYG ++ +L+ G + F +M + G
Sbjct: 844 SGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCE 903
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
Y +L+ + G + +M ++G+ Y + LC +GR D +
Sbjct: 904 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 963
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
+++ + +P IT+ LI G +++ +S++ M K PN+ T N+++
Sbjct: 964 FKQLTDM-GLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLG 1022
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ ++A +++EE + G+ KP+ +TY++++ + + E Y
Sbjct: 1023 KAGKAAEAGKMYEELL---AKGW----------KPNVFTYNALIRGYSVSGSPENAFAAY 1069
Query: 561 KGMALSGCQLDQTKHAWL 578
M + GC+ + + + L
Sbjct: 1070 GRMIVGGCRPNSSTYMQL 1087
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 118/581 (20%), Positives = 210/581 (36%), Gaps = 117/581 (20%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R + A+ L+D L + + WK + + L T+ LL GLG +G +
Sbjct: 514 ENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVK 573
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL-RIFNLMLEDCNLYPDIAA 266
+ M +L+ G+ + Y +L L K G + AL ++++ + C PD+++
Sbjct: 574 EVMQLLE---GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGC--MPDLSS 628
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y++V L + G L E + +M++ VL PD +L + V
Sbjct: 629 YNTVMYGLVKEGRLDEAFWMFCQMKK----------------VLAPDYATVCTILPSFVR 672
Query: 327 SHQWKGVFWVFKQ---------------------LRKSGLKPS------AATYGLAME-- 357
S K ++ L++ G + S A+ GL ++
Sbjct: 673 SGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDL 732
Query: 358 -----------------------------VMLQSGKY-------------DLVHEFFRKM 375
V L++G Y D+ E F +M
Sbjct: 733 FLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEM 792
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G TY +++ A + +I + + M +G T Y + L +
Sbjct: 793 KRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKML 852
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 494
+A+ + ++ S S P T+ L+ + G+I+D ++F M + CEPN N
Sbjct: 853 DEAINLYYQLMSEGFS-PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNI 911
Query: 495 MLKVYSRNDMFSKAKELF----EETTRANSSGYTF----LSGDG--------------AP 532
+L Y K ELF E+ + YT L DG
Sbjct: 912 LLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 971
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
L+PD TY+ ++ + + E +Y M G + + L++ +AGK
Sbjct: 972 LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAG 1031
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ LL G P+ + ++ V + E A A M
Sbjct: 1032 KMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRM 1072
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/521 (19%), Positives = 189/521 (36%), Gaps = 127/521 (24%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
G + +G +G R A L +K+ + + + Y L+ L K+G EA+ +
Sbjct: 137 GTFCTVFGAVGVEGGLRSAPVALPV---MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDV 193
Query: 251 FNLMLEDC----------------------------------NLYPDIAAYHSVAVTLGQ 276
+ M D + P++ +Y LGQ
Sbjct: 194 YKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQ 253
Query: 277 VGLLKELVKLIERMRQKPSK-----------------RIKNMHRKNWDPVL---EPDLVV 316
G L+E +++ +M ++ K R+ + W +PD V
Sbjct: 254 AGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVT 313
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y +L+ C S + V ++ L+ G + +Y A++ + Q G+ D + F +M
Sbjct: 314 YITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMK 373
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG---------------------- 414
+ G +Y L+ F + + N A+ +M G
Sbjct: 374 QKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESL 433
Query: 415 -----------------VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
VV +V Y LA GR A V ++K++ S P IT
Sbjct: 434 KALKRYELMKSKGIVPDVVAGNAVLYGLA----KTGRLGMAKRVFHELKAMGIS-PDNIT 488
Query: 458 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+T +I + D+ + IF M ++ C P++ +N+++ + + ++A ++F E
Sbjct: 489 YTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELK 548
Query: 517 RAN-----SSGYTFLSGDGAPLK-----------------PDEYTYSSMLEASATAHQWE 554
N + T L+G G K P+ TY+++L+ +
Sbjct: 549 EMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVN 608
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 595
Y + M ++GC D + + ++ + G+ L+ AF
Sbjct: 609 YALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGR---LDEAF 646
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 134/357 (37%), Gaps = 56/357 (15%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++ V S + V+K + G+ P+ TY + M + + V +M
Sbjct: 173 TYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEM 232
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV---VGTASVYYELACCLCNN 432
G +Y + +R + G++ EA +R ME+ G V T +V ++ LC+
Sbjct: 233 EARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI---LCDA 289
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG------------------------ 468
GR DA V K+K+ KP +T+ L+ D
Sbjct: 290 GRLADAKDVFWKMKA-SDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVS 348
Query: 469 -----------GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
G +D+ + +F MK P + N+++ + + D F++A ELF
Sbjct: 349 YTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM- 407
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
N G T P+ YT+ + + + Y+ M G D
Sbjct: 408 --NIHGPT----------PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN 455
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+L ++ G+ + + F L G P + +T M+ SN ++A+ + M
Sbjct: 456 AVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEM 512
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 110/282 (39%), Gaps = 20/282 (7%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E H K ++S ++ L + +M + + G T LL GL
Sbjct: 826 EMH-NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKD 884
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G+ A ++ D + + + +Y LL AG + +F M+E + PD
Sbjct: 885 GNIEDAEALFDEMLECGCEPNCA---IYNILLNGYRIAGDTEKVCELFESMVEQ-GMNPD 940
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
I +Y V TL G L + + +++ D LEPDL+ YN +++
Sbjct: 941 IKSYTVVIDTLCADGRLNDGLSYFKQLT---------------DMGLEPDLITYNLLIHG 985
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
S + + ++ + K G+ P+ TY + + ++GK + + ++ G
Sbjct: 986 LGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPN 1045
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
TY L+R + G A AA M G +S Y +L
Sbjct: 1046 VFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 23/240 (9%)
Query: 231 YTKLLAI--LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVK 285
YT +L I GK+G +AL+ + LM + + PD+ A ++V L G++G+ K +
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELM-KSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFH 475
Query: 286 LIERMRQKPSKRIKNMHRK------NWDPVLE-----------PDLVVYNAVLNACVPSH 328
++ M P M K N D ++ PD++ N++++ +
Sbjct: 476 ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAG 535
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ + +F +L++ L+P+ TY + + + GK V + M + +TY
Sbjct: 536 RGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYN 595
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
++ + G++N A+ + +M G + S Y + L GR +A + ++K +
Sbjct: 596 TVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV 655
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 194/496 (39%), Gaps = 79/496 (15%)
Query: 179 RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW-VYGLKDKRDLKSRFVYTKLLAI 237
+I+ + G+ + KLL GL G W L W +YG + ++ VYT L I
Sbjct: 211 QILRRKGVSVSINACNKLLGGLVRTG-WVD----LAWEIYGEVVRGGIELN-VYT--LNI 262
Query: 238 LGKA---GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ A R E + F +E ++ DI Y+++ + GL++E +L+ +
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+EP L+ YNA+L ++ V ++ + GL P+AATY
Sbjct: 323 ---------------MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + + E F +M++ G +++ L+ G + +A+ R ME+ G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427
Query: 415 VVGTASVYYELACCLCNNGRWQDA------------------------------------ 438
+V +Y L C NG DA
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
ML E ++ R P TFT LI G++D +++F+ M + + +P+ T N ++
Sbjct: 488 MLFNEMVE--RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
+ + +AKEL+++ R + + PD +Y ++L ++
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKD-------------IIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+ M G + + L+ R+G ++ G IP + ++
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652
Query: 618 IVQSNYEKAVALINAM 633
+ ++N EKA LIN M
Sbjct: 653 LKEANLEKAFILINEM 668
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 136/343 (39%), Gaps = 24/343 (6%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
++Y+ ++ V + + + F+ LR+ G+ S + ++++G DL E + +
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ + G + T ++V A ++ K + + +ME +GV Y L C G
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
++A ++ S R +P +T+ ++ G D + M + PN T N
Sbjct: 308 VEEAFQLLNSFSS-RGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 494 AMLKVYSRNDMFSKAKELFEETTR--------ANSSGYTFLSGDG--------------A 531
+L R D +A+E+F+E +R + SS L+ +G +
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
+ PD Y+ +++ + M GC +D + L +
Sbjct: 427 GIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADA 486
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ F+ ++E G +P FT ++ N +KA+ L AM
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 36/250 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVK 285
+ +T L+ K G +AL +F M+ NL PD Y+++ G++G KEL
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRT-NLKPDKVTYNTLIDGFCKAGEMGRAKEL-- 559
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
WD ++ PD + Y VLN S + Q+
Sbjct: 560 --------------------WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQML 599
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
+ G++P+ T ++ +SG +E+ KM +G + +Y L+ + +E +
Sbjct: 600 EKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+A + ME+RG+ Y + C G+ Q+A E++ LR + I G
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEA----EQV--LRKMIEIGINPDGA 713
Query: 462 IISSMDGGHI 471
SS+ GH+
Sbjct: 714 TYSSLINGHV 723
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/396 (17%), Positives = 145/396 (36%), Gaps = 64/396 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
++ L+ +L + G ++AL F M E + PD Y + + G L + +K+ + M
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ D+V YN LN + +F ++ + G+ P
Sbjct: 459 LARGCFM---------------DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + + G D F M ++ +TY L+ F + G++ A +M
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
++ ++ Y + C++G +A+ + +
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCD--------------------------- 596
Query: 471 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
Q ++ PN+ T N ++K Y R+ KA +E ++ S+G
Sbjct: 597 --------QMLEKGIRPNLVTCNTLIKGYCRSGDMPKA---YEYLSKMISNG-------- 637
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ PD ++Y+++++ E + M G Q + + +L GK
Sbjct: 638 --IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE 695
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
E ++E G P ++ ++ + Q N ++A
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 24/276 (8%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L +++M A M + G++ L++G G+ +A+++ + +
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K D + Y L+ KAG A +++ M+ ++ PD +Y +V GLL
Sbjct: 533 LKPD---KVTYNTLIDGFCKAGEMGRAKELWDDMIRK-DIIPDHISYGTVLNGFCSSGLL 588
Query: 281 KELVKLIERMRQKP--------SKRIKNMHRKNWDP------------VLEPDLVVYNAV 320
E + L ++M +K + IK R P + PD YN +
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
++ + + F + ++ K GL+ + TY L + GK + RKM + G
Sbjct: 649 IDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGI 708
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
TY L+ + + EA M QRG+V
Sbjct: 709 NPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/515 (19%), Positives = 201/515 (39%), Gaps = 63/515 (12%)
Query: 87 RIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWH 146
++ RL F N +R++L E +FEK
Sbjct: 219 KVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK----------------------MS 256
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
E+ R + +L+ L E + ++ + M + G + L+K D G
Sbjct: 257 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 316
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+AM +LD + K + + YT L+ L + G+ EA +F ML+ L P I
Sbjct: 317 DKAMKMLDE---MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH-GLCPGIIT 372
Query: 267 YHSVAVTLGQVGLLK---ELVKLIERMRQKPSKRIKN-----------------MHRKNW 306
++++ + G + +L+ ++E+ KP+ R N + R+
Sbjct: 373 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVV 432
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D L PD V YN +++ Q F +F + +GL+P T+ ++ + + G+ +
Sbjct: 433 DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLE 492
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ M K G ++ +T+ L+ + GK + NM + + TA +
Sbjct: 493 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 552
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 484
L + + +A ++ K+ +++ P +T T LI G + + + MK
Sbjct: 553 DALGKDYKLNEANAMLGKM--MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 610
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
C PN+ T ++ N +A+ + S + P+ +TY+ ++
Sbjct: 611 CSPNVYTYTIIINGLCNNGRVEEAETIL-------------FSMSSFGVSPNHFTYAVLV 657
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+A A + + + M +GCQ + ++ LL
Sbjct: 658 KAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 692
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 176/451 (39%), Gaps = 63/451 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L +AGR EA ++ M+E P Y + +G+ + +K+++ M
Sbjct: 268 YSILIHGLCEAGRLEEAFQLKQEMVEK-GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 326
Query: 291 RQKPSKRIKNMH----------------------RKNWDPVLEPDLVVYNAVLNACVPSH 328
K + N+H RK L P ++ +NA++N
Sbjct: 327 ATKAC--VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG 384
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
F + + K KP+ TY ME + + K R++ +G +TY
Sbjct: 385 WVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYN 444
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV----VEK 444
+LV F +EG++N A +M G+ + L LC GR + A + V+K
Sbjct: 445 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 504
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML------- 496
SL E+TFT LI G D +F++M ++ C T N L
Sbjct: 505 GISLD-----EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 559
Query: 497 KVYSRNDMFSKAKE------------LFEETTRANSSGYTFLSGD---GAPLKPDEYTYS 541
K+ N M K + L E RA + + + A P+ YTY+
Sbjct: 560 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 619
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSL 598
++ + E E + M+ G + +A L+ +AG+ L+ AF ++
Sbjct: 620 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR---LDRAFQIVSTM 676
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
++ G P+ ++ +L ++ + A AL
Sbjct: 677 VKNGCQPNSHIYSALLSGFVLSNTAIGARAL 707
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 170/415 (40%), Gaps = 45/415 (10%)
Query: 334 FWVFKQLRKS-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
F VF+++ K +P++ TY + + + ++G+ + + ++M + G TY VL++
Sbjct: 249 FRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIK 308
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS- 451
A + G ++A+ + M + V Y L LC G+ ++A V K+ L+H
Sbjct: 309 AKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM--LKHGL 366
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM----KDHCEPNIGTVNAMLKVYSRNDMFSK 507
P ITF LI G + +S FQ + K +C+PNI T N +++ R K
Sbjct: 367 CPGIITFNALINGYCKEGWV---VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423
Query: 508 AKEL----------------------FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
A L F + + N + F S + A L+PD +T++++++
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+ E + M G LD+ L+ + GK + F++++E +
Sbjct: 484 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 543
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFESNEDRISRDKL 661
F L +A A++ M P +T E + E +S L
Sbjct: 544 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 603
Query: 662 EKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLH 716
E++ A C+ N + I ++ L E E L S + FG +SP H
Sbjct: 604 ERMKQAGCSPNVYTYTIIINGLCNNGRV---EEAETILFSMSSFG-----VSPNH 650
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 5/160 (3%)
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+R+M G +G + Y+ +V A + G + A + + G V L C
Sbjct: 182 YRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCR 241
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
+A V EK+ + +P +T++ LI + G +++ + Q M + C+P+
Sbjct: 242 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 301
Query: 491 TVNAMLKVYSRNDMFSKAKELFEE-TTRA---NSSGYTFL 526
T ++K M KA ++ +E T+A N YT L
Sbjct: 302 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341
>gi|297853270|ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340358|gb|EFH70775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 146/378 (38%), Gaps = 68/378 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA-YHSVAVTLGQVGLLKELVKLIER 289
Y L+ I + G R+ + M++D YP A ++ + T G+ GL +++V+ +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDG--YPTTACTFNLLICTCGEAGLARDVVE--QF 210
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ K N+ P YNA+L++ + Q+K + WV++Q+ + G P
Sbjct: 211 IKSKTF---------NYRPYKHS----YNAILHSLLGVKQYKLIDWVYEQMLEDGFSPDV 257
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + M + GK D ++ +M K G + TY +L+ K A+ + +
Sbjct: 258 LTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLTH 317
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + GV +P I FT L+ G
Sbjct: 318 MREVGV------------------------------------EPGVIHFTTLVDGLSRAG 341
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
++ C M K C P++ M+ Y KA+E+F+E T
Sbjct: 342 KLEACKYFMDEMVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ-------- 393
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
P+ +TY+SM+ A +++ + K M GC + ++ L+ AGK
Sbjct: 394 -----LPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNLRNAGKV 448
Query: 589 HLLEHAFDSLLEAGEIPH 606
++E G H
Sbjct: 449 LEAHEIVKDMVEKGHYVH 466
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 126/327 (38%), Gaps = 19/327 (5%)
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
A Y +L++ F E G+ + M + G TA + L C G +D +
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFI 211
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 502
K K+ + +P + ++ ++ S + +++ M +D P++ T N ++ R
Sbjct: 212 KSKTFNY-RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFSPDVLTYNIVMFANFRL 270
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+ L +E + DG PD YTY+ +L AT ++ +
Sbjct: 271 GKTDRLYRLLDEMVK-----------DG--FSPDLYTYNILLHHLATGNKPLAALNLLTH 317
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M G + L+ SRAGK ++ D +++ G P + +T M+ I
Sbjct: 318 MREVGVEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVCYTVMITGYISGGE 377
Query: 623 YEKAVALINAM---AYAPFHITERQWTELF-ESNEDRISRDKLEKLLNALCNCNAASSEI 678
EKA + M P T F + + + + L+++ + CN N
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYST 437
Query: 679 TVSNLSRALHALCRSEKERDLSSSAHF 705
V+NL A L E +D+ H+
Sbjct: 438 LVNNLRNAGKVLEAHEIVKDMVEKGHY 464
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 61/330 (18%), Positives = 127/330 (38%), Gaps = 27/330 (8%)
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ +A Y L M++ + G+Y + +M K G A T+ +L+ E G + V
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVV 207
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ Y + L +++ V E++ S P +T+ ++ +
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFS-PDVLTYNIVMFA 266
Query: 465 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
+ G D + M KD P++ T N +L + + A L T G
Sbjct: 267 NFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLL---THMREVG- 322
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
++P ++++++ + A + E +Y M GC D + ++
Sbjct: 323 ---------VEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVCYTVMITGYI 373
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI----------NAM 633
G+ E F + E G++P+ + M+ + +++A +L+ N +
Sbjct: 374 SGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNFV 433
Query: 634 AYAPFHITERQWTELFESNEDRISRDKLEK 663
Y+ R ++ E++E I +D +EK
Sbjct: 434 VYSTLVNNLRNAGKVLEAHE--IVKDMVEK 461
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 169/428 (39%), Gaps = 62/428 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG---QVGLLKELVKLI 287
YT L+ L + G L +FN M E LG V LL L+++
Sbjct: 64 YTTLIGALSEVGESDRMLALFNQMQE-----------------LGYEVNVHLLTTLIRVF 106
Query: 288 ER-MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
R R + + + + N + D+V+YN ++ + + F +++ +GL
Sbjct: 107 SREGRVDAALSLLDEMKSN---TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLV 163
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P TY M V+ ++ + D E F +M ++ + A Y ++ + GK +EA +
Sbjct: 164 PDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSL 223
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ +G + + Y + CL G+ A+ + E++K R + P T+ +I
Sbjct: 224 LERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK--RDAMPNLPTYNIIIGMLC 281
Query: 467 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G+++ + MK+ PN+ T+N M+ D KA++L E + Y
Sbjct: 282 KAGNVEAAFKVRDAMKEAGLFPNVRTINIMI------DRLCKAQKLDEACSIFEGMDYKV 335
Query: 526 LSGDGAPLK----------------------------PDEYTYSSMLEASATAHQWEYFE 557
S DGA P+ Y+S++ + E
Sbjct: 336 CSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGH 395
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+YK M SGC D + +AG+ F+ + G +P ++ +LI +
Sbjct: 396 KMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYS-ILIHS 454
Query: 618 IVQSNYEK 625
+V++ + +
Sbjct: 455 LVKAGFAR 462
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 172/422 (40%), Gaps = 78/422 (18%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ L+ LGK GR +A RI+ ML D + P++ Y S L++ K +R
Sbjct: 343 FCSLIDGLGKQGRVDDAYRIYERML-DADQIPNVVVYTS---------LIRNFFK-CDR- 390
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ K K M R PDL++ N ++ + + + +F++++ G P
Sbjct: 391 KEDGHKMYKEMMRSGC----SPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+Y + + ++++G +E + M G + Y ++ F + GK+N+A + M
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506
Query: 411 EQRG----VVGTASV-------------------------------YYELACCLCNNGRW 435
+ G VV SV Y L GR
Sbjct: 507 KTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRV 566
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT--- 491
+A LV+E++ + P T+ L+ + I++ + FQ MKD C PN T
Sbjct: 567 DEAYLVMEEMMQ-KGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCI 625
Query: 492 -VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL------SGDGAPLK---------- 534
+N + KV N F +E+ ++ + N+ YT + SG+ A
Sbjct: 626 LINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASG 685
Query: 535 --PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
PD +Y++M+E + A++ +++ L GC + TK L++A +C LE
Sbjct: 686 GIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSI-HTKTCVALLDALHKAEC--LE 742
Query: 593 HA 594
A
Sbjct: 743 QA 744
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/412 (18%), Positives = 172/412 (41%), Gaps = 35/412 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A S+L+ + K + S Y +L LGK G+ +ALRIF M
Sbjct: 207 MIMGYGSAGKFDEAYSLLER---QRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK 263
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P++ Y+ + L + G ++ K+ + M++ L P++
Sbjct: 264 RDA--MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAG---------------LFPNVR 306
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ + + +F+ + P AT+ ++ + + G+ D + + +M
Sbjct: 307 TINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERM 366
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ + + Y L+R F++ + + + M + G + C+ G
Sbjct: 367 LDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGET 426
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+ + E+IK+ R P +++ LI S + G + ++ MKD C + N
Sbjct: 427 EKGRALFEEIKA-RGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNT 485
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + ++ +KA +L EE + G+ P TY S+++ A + +
Sbjct: 486 VIDGFCKSGKVNKAYQLLEEM---KTMGH----------HPTVVTYGSVVDGLAKIDRLD 532
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
+++ +G +L+Q ++ L+ + G+ + +++ G P+
Sbjct: 533 EAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPN 584
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/327 (18%), Positives = 125/327 (38%), Gaps = 23/327 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P Y ++ A + + +F Q+++ G + + + V + G+ D
Sbjct: 57 FRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAAL 116
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M + + Y V + F + GK++ A M+ G+V Y + L
Sbjct: 117 SLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVL 176
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
C R +A+ + E+++ R P + +I+ G D+ S+ + + C P+
Sbjct: 177 CKANRLDEAVEIFEQMEQNRQV-PCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPS 235
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTR---ANSSGYTFLSG----------------- 528
+ N +L + KA +FEE R N Y + G
Sbjct: 236 VVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDA 295
Query: 529 -DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
A L P+ T + M++ A + + +++GM C D L+ + G+
Sbjct: 296 MKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGR 355
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ +L+A +IP+ + +T ++
Sbjct: 356 VDDAYRIYERMLDADQIPNVVVYTSLI 382
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/263 (17%), Positives = 101/263 (38%), Gaps = 19/263 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ L + + ++ M G + ++ G G +A +L+ +
Sbjct: 450 ILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE---M 506
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K + Y ++ L K R EA +F + + + Y S+ G+VG
Sbjct: 507 KTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSN-GIELNQVIYSSLIDGFGKVGR 565
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ E ++E M QK L P++ +N +L+ V + + F+
Sbjct: 566 VDEAYLVMEEMMQKG---------------LTPNVYTWNCLLDGLVKAEEINEALVCFQS 610
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ P+ TY + + + + K++ F+++M K G +TY ++ + G
Sbjct: 611 MKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGN 670
Query: 400 INEAVAAVRNMEQRGVVGTASVY 422
+ +A + G + ++ Y
Sbjct: 671 VAQASSLFERFRASGGIPDSASY 693
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 170/435 (39%), Gaps = 67/435 (15%)
Query: 321 LNAC------VPSHQWKGVFW-VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+NAC + W + W V+ ++ +SG++ + T + + + + K D V F
Sbjct: 150 INACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLI 209
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
M + G +TY L+ A+ EG + EA + +M +G+ T Y + LC G
Sbjct: 210 DMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKG 269
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
R+ A V ++ S+ S P T+ L++ S + + IF M P++ +
Sbjct: 270 RYVRAKGVFNEMLSIGLS-PDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISF 328
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++++ V SRN +A F + +SG L PD Y+ ++
Sbjct: 329 SSLIGVSSRNGHLDQALMYFRD---MKTSG----------LVPDNVIYTILINGYCRNGM 375
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC--HLLEHA---FDSLLEAGEIPHP 607
+ M GC LD + +L G C LL A FD ++E G +P
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTIL-----NGLCKKKLLADANALFDEMVERGVVPDF 430
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMA---YAPFHITER-------QWTELFESNE---D 654
FT ++ + N KA++L M P +T + TE+ ++NE +
Sbjct: 431 CTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNE 490
Query: 655 RISRDKLEK------LLNALCNCNAASSEI-------------TVSNLSRALHALCRSEK 695
ISR L+N CN S T+ + + CRS
Sbjct: 491 MISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSG- 549
Query: 696 ERDLSSSAHFGSQAI 710
DLS + F + I
Sbjct: 550 --DLSKADEFLGKMI 562
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 100/505 (19%), Positives = 183/505 (36%), Gaps = 67/505 (13%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+ ++V+ L + F+ M Q G+ L+ +G +A V++ +
Sbjct: 187 TLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSM 246
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
G K L F Y ++ L K GR A +FN ML L PD Y+++
Sbjct: 247 SGKGLKPTL---FTYNAVINGLCKKGRYVRAKGVFNEMLS-IGLSPDTTTYNTL------ 296
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
L+E R K++ + PDL+ +++++ +
Sbjct: 297 ---------LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMY 347
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F+ ++ SGL P Y + + ++G E KM + G A+ + Y ++ +
Sbjct: 348 FRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCK 407
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV--------------- 441
+ + +A A M +RGVV + L C G A+ +
Sbjct: 408 KKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVT 467
Query: 442 -------------VEKIKSL------RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 481
+EK L R P I++ L+ + G + + ++ M
Sbjct: 468 YNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMI 527
Query: 482 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
+ +P + T N ++K Y R+ SKA E G G G PD TY+
Sbjct: 528 RKGIKPTLVTCNTVIKGYCRSGDLSKADEFL---------GKMISEGVG----PDSITYN 574
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
+++ + ++ M G Q D + +L R G+ E ++E
Sbjct: 575 TLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIER 634
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKA 626
G P +T ++ + Q N ++A
Sbjct: 635 GIDPDRSTYTTLINGYVSQDNLKEA 659
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 115/284 (40%), Gaps = 26/284 (9%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+ A +++ L ++++ A M + G++ L+ G +G+ +A+S+
Sbjct: 394 DVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSL- 452
Query: 214 DWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+G+ ++++K V Y L+ K +A ++N M+ ++P+ +Y +
Sbjct: 453 ---FGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISR-KIFPNHISYAILVN 508
Query: 273 TLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNW---------DPVLE--------P 312
+G + E +L + M +K P+ N K + D L P
Sbjct: 509 GYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGP 568
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D + YN ++N V F++ ++ GL+P TY + + + G+
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
RKM + G TY L+ + + + EA M QRG V
Sbjct: 629 RKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFV 672
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 148/357 (41%), Gaps = 39/357 (10%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
+ L+ + R +A+ + + M E+ PD+ Y+++ ++GL+ + V+L +RM
Sbjct: 84 SSLINGFCQGNRVFDAIDLVSKM-EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME 142
Query: 292 QK-----------------PSKRIKNMHRKNWDPVLE---PDLVVYNAVLNACVPSHQWK 331
+ S R + R D V+ P+++ + AV++ V ++
Sbjct: 143 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 202
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+++++ + + P TY + + G+ D + M G +TY L+
Sbjct: 203 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 262
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
F + +++E R M QRG+VG Y + GR A + ++ S +
Sbjct: 263 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNI 322
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
+ I GL ++ ++ + +F++M K E +I T N ++ + A +
Sbjct: 323 RTYSILLYGLCMN----WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 378
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
LF LS G LKPD +Y++M+ QW+ + +Y+ M G
Sbjct: 379 LFRS-----------LSCKG--LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 422
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 130/322 (40%), Gaps = 18/322 (5%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
DL YN V+N ++ V ++ K G +P T + Q + +
Sbjct: 44 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 103
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
KM + G + Y ++ + G +N+AV ME+ GV A Y L LC +
Sbjct: 104 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 163
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGT 491
GRW DA ++ + +R P ITFT +I + G + + +++ M C +P++ T
Sbjct: 164 GRWSDAARLMRDM-VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 222
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N+++ + +AK++ + PD TY++++ +
Sbjct: 223 YNSLINGLCMHGRVDEAKQMLDLMVTKGC-------------LPDVVTYNTLINGFCKSK 269
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ + +++ MA G D + ++ +AG+ + F + P+ ++
Sbjct: 270 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYS 326
Query: 612 EMLIQAIVQSNYEKAVALINAM 633
+L + EKA+ L M
Sbjct: 327 ILLYGLCMNWRVEKALVLFENM 348
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 165/412 (40%), Gaps = 37/412 (8%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R L S ++K+L+ + K+ + +F+ M E C + D+ +Y+ V L +
Sbjct: 5 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVI 63
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ ++ +M + EPD+V ++++N ++ + ++ +
Sbjct: 64 ALSVVGKMMKFG---------------YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 108
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
G +P Y ++ + G + E F +M + G A+TY LV G+ ++
Sbjct: 109 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 168
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A +R+M R +V + + G++ +AM + E++ + R P T+ LI
Sbjct: 169 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLI 227
Query: 463 ISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G +D+ + M C P++ T N ++ + ++ + +LF E +
Sbjct: 228 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287
Query: 522 G-----YTFLSG---DGAP-----------LKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
G T + G G P +P+ TYS +L + E +++
Sbjct: 288 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFEN 347
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
M S +LD T + ++ + G F SL G P + +T M+
Sbjct: 348 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 399
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 89/221 (40%), Gaps = 22/221 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G +A +LD + K L Y L+ K+ R E ++F M
Sbjct: 226 LINGLCMHGRVDEAKQMLDL---MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 282
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L D Y+++ Q G ++ RM +P+ R
Sbjct: 283 QR-GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR------------------ 323
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ +L + + + +F+ ++KS ++ TY + + M + G + + FR +
Sbjct: 324 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 383
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ G ++Y ++ F + + +++ R M++ G++
Sbjct: 384 SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 138/320 (43%), Gaps = 18/320 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD+ YN ++N + + + K GL P+ +Y ++ +S +YD+ +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+MA+ G +TY +L+ G +++AV + RGV A++Y L LC
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNI 489
GR+ A L+ ++ R+ P + LI + G D+ +F ++ + ++
Sbjct: 462 KTGRFLPAKLLFSEMLD-RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDV 520
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
NAM+K + R+ M +A + L PD++TYS++++
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEH-------------LVPDKFTYSTIIDGYVK 567
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+++ M + C+ + + L+ G + E F + +P+ +
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 610 FTEMLIQAIVQ--SNYEKAV 627
+T LI+++ + S EKAV
Sbjct: 628 YTT-LIRSLAKESSTLEKAV 646
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/479 (18%), Positives = 182/479 (37%), Gaps = 78/479 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L + GS +A+ + D+V L D + LL++L K+ R +A ++++ M
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDS--VPDVIACNSLLSLLVKSRRLGDARKVYDEM- 196
Query: 256 EDCNLYPDIAAYHSVAVTLGQV--GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
C+ + Y + + G G ++ KLIE W P+
Sbjct: 197 --CDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIE---------------GRWGKGCIPN 239
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+V YN ++ + + VFK+L+ G P+ T+G + + G +
Sbjct: 240 IVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLS 299
Query: 374 KMAKSG-------------------------EAIG----------ALTYKVLVRAFWEEG 398
++ + G E+IG TY +L+ +EG
Sbjct: 300 EVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEG 359
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
K AV + ++G++ Y L C + + A ++ ++ R KP +T+
Sbjct: 360 KKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAE-RGCKPDIVTY 418
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
LI + GH+DD +++ + D P+ N ++ + F AK LF E
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
N + PD Y Y+++++ + ++ V+ G ++D H
Sbjct: 479 RN-------------ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGE---IPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ R+G +L+ A + E +P ++ ++ + Q + A+ + M
Sbjct: 526 MIKGFCRSG---MLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/282 (18%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
NM K D + PD +YN +++ + ++ +F ++ + P A Y ++
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++SG +D + F + G + + + +++ F G ++EA+A + M +
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE------- 548
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
H P + T++ +I + + I IF+
Sbjct: 549 -----------------------------EHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 480 HM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
+M K+ C+PN+ T +++ + F A+E F+E + L P+
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD-------------LVPNVV 626
Query: 539 TYSSMLEASAT-AHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
TY++++ + A + E Y ++ M + C ++ LL
Sbjct: 627 TYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 165/393 (41%), Gaps = 40/393 (10%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+RF ++ L+A L KAGR EA+ +N MLE + P++ + + +L Q G + + + +
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLER-HCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GL 345
++ PS ++ N ++N +F ++ K+ L
Sbjct: 61 FRGIQCSPS------------------VITLNILINGFCELQLLDKALELFHEMEKNFAL 102
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P A TY ++ + + D + + + + A+T + R F + +++EA
Sbjct: 103 VPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITS--VARGFCKAQRVDEAYQ 160
Query: 406 AVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ +M ++ V + + C GR ++A ++E + S+ P +T+T LI
Sbjct: 161 LLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSM-GCVPNAVTYTTLIDG 219
Query: 465 SMDGGHIDDCISIFQHMKD---HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G++ + + +F+ + H EPN+ T NA++ + D A EL ++ +
Sbjct: 220 FCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD-- 277
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
L+ D +TY+++++ + V++ M GC + L+
Sbjct: 278 -----------LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHA 326
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+AG + S++ G P +T +L
Sbjct: 327 HCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 15/244 (6%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KAGR EA + ++ P+ Y ++ + G L E ++L + + +
Sbjct: 187 KAGRVREAYEMLETLVSM-GCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR------ 239
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
D EP++V +NA+++ + + + F + KQ++ L+ TY M+ +
Sbjct: 240 -------DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ G+ V F +M + G +TY LV A + G + +A +R+M +G+
Sbjct: 293 CKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
+ Y L L NG+ + A EKI R P + ++ L+ +D+ + +
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRER-CPPCAVVYSALVRGCCKAALVDEAVKYYV 411
Query: 480 HMKD 483
M D
Sbjct: 412 EMLD 415
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 38/267 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G R+A +L+ + + + + YT L+ K+G EAL++F ++
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGC---VPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP-------------------- 294
D + P++ ++++ L + L+ +L+++M+ +
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGR 297
Query: 295 ----SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
S+ + M R+ +P +V Y +++A + + V + + G+ P
Sbjct: 298 TSEVSRVFEEMLREGCNP----SVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + +E + ++GK EFF K+ + A+ Y LVR + ++EAV M
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413
Query: 411 EQRGVV---GTASVYYELACCLCNNGR 434
R + T + E+ LC GR
Sbjct: 414 LDRRLAPDPATCKLLVEM---LCKRGR 437
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 189/452 (41%), Gaps = 46/452 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL D + +QA+ +L + K + L YT ++ L + G+ +A +F+ ML
Sbjct: 177 LLKGLCDDKTSQQALDLLHIMADHKGRCPLDV-VAYTTVINGLLREGQLDKAYSLFDAML 235
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D PD+ Y S+ L + + + ++ RM +KN + PD +
Sbjct: 236 -DRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM-------VKNG--------VMPDCI 279
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+Y ++++ S + K +FK++ + G++P TY M+ + ++GK + F +
Sbjct: 280 MYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSL 339
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G + TY L+ + EG + E + M ++G+ ++ + + +
Sbjct: 340 VKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKV 399
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
+A+LV ++ + P + + ++ G +DD +S F +K + PNI
Sbjct: 400 DEALLVFSNMRQ-QGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTT 458
Query: 495 MLKVYSRNDMFSKAKEL-FEETTRANSSGYTFLSGDGAPL-------------------- 533
++ D + K +EL FE R F + L
Sbjct: 459 LIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIG 518
Query: 534 -KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
+P+ TY+++++ + + + M +G + + ++ S+ G+ +E
Sbjct: 519 IEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR---IE 575
Query: 593 HAFDSLLEA-GEIPHPLFFT-EMLIQAIVQSN 622
L E G+ +P T EML+Q + Q+
Sbjct: 576 DGLTLLREMDGKGVNPGIVTYEMLLQGLFQAG 607
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 136/359 (37%), Gaps = 50/359 (13%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+V Y V+N + Q + +F + G P TY + + ++ D + F
Sbjct: 207 DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 266
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M K+G + Y LV + GK EA+ + M + GV Y L LC N
Sbjct: 267 TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKN 326
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS--------------------SMDGGH-- 470
G+ +A + + + H KP T+ L+ M GH
Sbjct: 327 GKSTEARKIFDSLVKRGH-KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 385
Query: 471 -------------IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+D+ + +F +M+ P+I +L D+ A + + +
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVL------DILCTAGRVDDALS 439
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
+ NS L +G L P+ +++++ T +W+ E + M G LD
Sbjct: 440 QFNS-----LKSEG--LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFN 492
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
++ + G+ ++ FD ++ G P+ + ++ + ++A+ L+ M +
Sbjct: 493 AIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVF 551
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 155/373 (41%), Gaps = 26/373 (6%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ LS+ + K + M ++G+M L+ G G ++A+ + +
Sbjct: 249 IISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHG 308
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ YT L+ L K G+ EA +IF+ +++ + PD Y ++ G L
Sbjct: 309 VEPDV---VTYTALMDYLCKNGKSTEARKIFDSLVKRGH-KPDSTTYGTLLHGYATEGAL 364
Query: 281 KELVKLIERMRQKPSK---RIKNM-------HRKNWDPVL----------EPDLVVYNAV 320
E+ L++ M +K + I NM H K + +L PD+V Y V
Sbjct: 365 VEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTV 424
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
L+ + + F L+ GL P+ + + + K+D V E +M G
Sbjct: 425 LDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGI 484
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ + + ++ ++G++ EA M + G+ + Y L C +G+ +AM
Sbjct: 485 CLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMK 544
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
++ + KP ++T+ +I G I+D +++ + M P I T +L+
Sbjct: 545 LL-GVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL 603
Query: 500 SRNDMFSKAKELF 512
+ AKEL+
Sbjct: 604 FQAGRTVAAKELY 616
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL W + V + + + D+ + ++ L K GR EA +F+LM+
Sbjct: 459 LIHGLCTCDKWDK---VEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMV 515
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y+++ G + E +KL+ M K P V
Sbjct: 516 R-IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVK---------------PSDV 559
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++N + + + + +++ G+ P TY + ++ + Q+G+ E + +M
Sbjct: 560 TYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619
Query: 376 AK 377
K
Sbjct: 620 IK 621
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 160/412 (38%), Gaps = 36/412 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + +LA L + RI+ LM ++ PD+ Y + L + G + + +++++
Sbjct: 137 FAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLD 196
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS--GLK 346
M R++ D + PD+V N V++ S + + +Q S G
Sbjct: 197 -----------GMSRQDLD--IRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCP 243
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ + G + +E KM G +T +V G+ A+
Sbjct: 244 PNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEF 303
Query: 407 VRNMEQRGV----VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
R E+R V G A Y L L + AM + + S HS P I + +I
Sbjct: 304 FR--EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHS-PDAIMYFTMI 360
Query: 463 ISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G ++D S+ MK+ + + N ++ + R +A EL +E
Sbjct: 361 SGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG-- 418
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
++PD TY+++L S A + + + M GCQ L+
Sbjct: 419 -----------IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ GK S+ E+G P+ + + ++ + + + A+ L + M
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD Y ++ L Q G L++ + M++ K D YN ++
Sbjct: 351 PDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL---------------DTKAYNILI 395
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + + +++++ G++P TY + ++G + V E KM G
Sbjct: 396 AGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ 455
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+T+ LV + + GKI+EA+ +R+M++ G+ +Y L LC G A+ +
Sbjct: 456 PSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIEL 515
Query: 442 VEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 497
+++K S P + TF L+ D + + M+ + C P+ TV+ +++
Sbjct: 516 FDEMK--EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 199/503 (39%), Gaps = 46/503 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + T K ++ + + SG + ++ GL +G +A L V G+
Sbjct: 156 LIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKA---LKMVEGML 212
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGL 279
+ S YT L+ L + GR EA IF M+ +DC D AY S+ +
Sbjct: 213 KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT--ADALAYVSLVNGYCKSSR 270
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
KE K+++ +R P + VYNA+++ + + VF+
Sbjct: 271 TKEAQKVVDGIRGTPY------------------IDVYNALMDGYCKEGRLDEIPNVFED 312
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ G P+ TY + M+ + + GK D F M +G ++Y +++ ++ K
Sbjct: 313 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 372
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK-IKSLRHSKPLEITF 458
EA + M Q G+ A Y L C R+ DA+ +++ IK+ P +T+
Sbjct: 373 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA--GVDPDNVTY 430
Query: 459 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV-NAMLKVYSRNDMFSKAKELFEETT 516
LI + D + M ++ C + T N ++ + +A L + T
Sbjct: 431 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 490
Query: 517 ----RANSSGYT-FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
AN+ Y F+ + DE SS+L T + V G+ C+ +
Sbjct: 491 GHGVEANTVTYNIFIDRLCKEGRLDE--ASSLLSEMDTLRDEVSYTTVIIGL----CKAE 544
Query: 572 QTKHAWLLVEASRA--GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
Q A L A G C + H F+ L++A L L++ +VQ +V
Sbjct: 545 QLDRASKLAREMVAVKGLC-ITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVIT 603
Query: 630 INAM--AYAPFHITERQWTELFE 650
N + ++ W ELF+
Sbjct: 604 YNMVITCLCKLDKVDKAW-ELFD 625
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 177/437 (40%), Gaps = 42/437 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ L KA + +A + + M+ D + PD ++S+ L + G + L+
Sbjct: 11 FTYNILIDGLCKASKTDKASEMLHEMV-DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 69
Query: 289 RM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M +Q+ R K + + PD+V Y+ + +
Sbjct: 70 VMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRG 129
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ F + K++ +G P+ TY ++ + ++ K + +E + SG +TY
Sbjct: 130 RIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYT 189
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
++V +EG++++A+ V M +RG + Y L LC GR +A + +++ S
Sbjct: 190 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS- 248
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKA 508
+ + + L+ + + ++ P I NA++ Y + +
Sbjct: 249 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG--TPYIDVYNALMDGYCKEGRLDEI 306
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW-EYFEYVYKGMALSG 567
+FE+ ++ G P+ TY+ +++ + E F ++ + M +G
Sbjct: 307 PNVFED-----------MACRGCV--PNIKTYNIVMDGLCKHGKVDEAFPFL-ESMHSAG 352
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
C D + ++ +A K D +++AG P + + ++ Q + ++ AV
Sbjct: 353 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 412
Query: 628 ALINAMAYA---PFHIT 641
++ M A P ++T
Sbjct: 413 GILKNMIKAGVDPDNVT 429
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/327 (18%), Positives = 116/327 (35%), Gaps = 48/327 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ YN +++ + + + ++ G+ P T+ M+ + ++GK++ H
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
MA+ TY L+ ++ ++ A V G V Y LA LC
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
GR +A +V+++ + C PN+ T
Sbjct: 128 RGRIDEAFELVKEMSG-----------------------------------NGCTPNLVT 152
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ + KA EL E SSG+ PD TY+ +++
Sbjct: 153 YNTLIDGLCKASKTEKAYELLETLV---SSGFV----------PDVVTYTIIVDGLCKEG 199
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ + + +GM GC + L+ R G+ H F ++ L +
Sbjct: 200 RLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYV 259
Query: 612 EMLIQAIVQSNYEKAVALINAMAYAPF 638
++ S ++A +++ + P+
Sbjct: 260 SLVNGYCKSSRTKEAQKVVDGIRGTPY 286
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+ +L+ L D G +A+ +L ++ +KR +Y +L+ LGK + + ++
Sbjct: 406 MSMLESLCDAGKTTEALDLLSKIH---EKRISTDTVMYNTVLSALGKLKKTSDLHDLYEK 462
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M +D PDI +Y+ + + G+ G ++E VK+ E + K PD
Sbjct: 463 MKQD-GPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCK---------------PD 506
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
++ +N+++N + FK++R+ GL P TY +E ++ K ++ F
Sbjct: 507 IISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFD 566
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+M G + +TY +L+ G+ EAV ++Q+G+ + Y
Sbjct: 567 EMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 615
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 24/317 (7%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKN-WKFVRIMNQSGLMFTEGQMLK-LLKGLGDKGS 205
EK + A ++ L+ M K + F +++ + F + L++ L G
Sbjct: 323 EKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGH 382
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+A + ++ D+ D R Y +L L AG+ EAL + + + E + D
Sbjct: 383 ASEAHRLFCNMWSFHDEGD---RDAYMSMLESLCDAGKTTEALDLLSKIHEK-RISTDTV 438
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQK-PSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y++V LG++ +L L E+M+Q PS PD+ YN ++++
Sbjct: 439 MYNTVLSALGKLKKTSDLHDLYEKMKQDGPS----------------PDIFSYNILISSF 482
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + + +F++L S KP ++ + + ++G D H F++M + G +
Sbjct: 483 GRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDV 542
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+TY L+ F + K+ A M G Y L CL +GR +A+ + K
Sbjct: 543 VTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAK 602
Query: 445 IKSLRHSKPLEITFTGL 461
+K + P IT+ L
Sbjct: 603 LKQ-QGLTPDSITYAVL 618
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 152/386 (39%), Gaps = 35/386 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y LL L K + + +F ++ + C PD Y + G++G E + L
Sbjct: 261 FAYNMLLDALAKDNKVDQVYMVFKDMKRKHCE--PDEYTYTIMIRMTGKIGKADESLTLF 318
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL--RKSGL 345
+ M +K P+L+ YN ++ A + ++F ++ S
Sbjct: 319 QEMTEKG---------------YTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNK 363
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
+ + Y + + + G H F M + Y ++ + + GK EA+
Sbjct: 364 FMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALD 423
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ + ++ + +Y + L + D + EK+K S P ++ LI S
Sbjct: 424 LLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPS-PDIFSYNILISSF 482
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G +++ + IF+ +++ C+P+I + N+++ +N +A F+E
Sbjct: 483 GRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKE---------- 532
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
+ +G L PD TYS+++E + E ++ M GC + + LL R
Sbjct: 533 -MREEG--LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLER 589
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFF 610
+G+ + L + G P + +
Sbjct: 590 SGRTAEAVDLYAKLKQQGLTPDSITY 615
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 95/223 (42%), Gaps = 35/223 (15%)
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLE-----------------ITFTGLIISSMDGG-HID 472
N+ + ++++ K +LR S+ L+ I+ ++I GG ++
Sbjct: 151 NSFTYNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGSISTINILIGIFGGGADVE 210
Query: 473 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
C + + K + N T +L+ + R++ +KA E++ E R GY
Sbjct: 211 RCFDLVK--KWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRR---RGY--------- 256
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
K D + Y+ +L+A A ++ + V+K M C+ D+ + ++ + GK
Sbjct: 257 -KLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESL 315
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMA 634
F + E G P+ + + M IQA+ + +K + L + M
Sbjct: 316 TLFQEMTEKGYTPNLIAYNTM-IQALANNRMVDKTIFLFSKMV 357
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/434 (19%), Positives = 179/434 (41%), Gaps = 45/434 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL KG ++++ D V + + S Y LL L K G A+++ M+
Sbjct: 208 LMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS---YGTLLNGLCKIGETRCAIKLLR-MI 263
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
ED + PD+ Y+++ L + L+ E M + + PD++
Sbjct: 264 EDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRG---------------IFPDVI 308
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ ++ + Q G F + ++ + P TY + ++ + + GK M
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G +TY L+ + G+++ A M Q V + Y + LC
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSV 428
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNA 494
+AM ++ ++ ++ P +T+ LI G I + + + + +P ++ T +
Sbjct: 429 DEAMNLLREMLH-KNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTS 487
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+L +N KA LF + ++P++YTY+++++ + +
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERG-------------IQPNKYTYTALIDGLCKGARLK 534
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFT 611
+ +++ + + GC +D + ++ + G +L+ A + + G IP + F
Sbjct: 535 NAQKLFQHILVKGCCIDVYTYNVMIGGLCKEG---MLDEALAMKSKMEDNGCIPDAVTF- 590
Query: 612 EMLIQAIVQSNYEK 625
+ I++S +EK
Sbjct: 591 ----EIIIRSLFEK 600
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/439 (19%), Positives = 174/439 (39%), Gaps = 41/439 (9%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
++ R + ++D L + ++ + + F MN G+ L+ G G
Sbjct: 265 DRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLM 324
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A S+L+ + D+ + YT L+ L K G+ EA + +M ++ + P++ Y
Sbjct: 325 GAFSLLNEMTLKNINPDV---YTYTILIDALCKEGKLKEAKNLLGVMTKE-GVKPNVVTY 380
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ VG + ++ M Q + P + YN ++N
Sbjct: 381 STLMDGYCLVGEVHNAKQIFHAMVQTE---------------VNPSVCSYNIMINGLCKG 425
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ +++ + P+ TY ++ + +SG+ + +++ G+ +TY
Sbjct: 426 KSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITY 485
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + +++A+A M++RG+ Y L LC R ++A + + I
Sbjct: 486 TSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHI-- 543
Query: 448 LRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 505
L +++ T+ +I G +D+ +++ M+D+ C P+ T +++ D
Sbjct: 544 LVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDEN 603
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAP--------------LKPDEYTYSSMLEASATAH 551
KA++L E + G+ +P LKP Y ++S S
Sbjct: 604 DKAEKLLHEMIAKGLLHFRNFHGERSPVTNKVIVNFHEKETLKPTAYLFAS----SGVDI 659
Query: 552 QWEYFEYVYKGMALSGCQL 570
Q Y V G++L QL
Sbjct: 660 QCLYIPIVPSGISLFNSQL 678
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 121/321 (37%), Gaps = 31/321 (9%)
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
H+A+ FN ML N P I + + LG + +K I +Q K I
Sbjct: 114 HDAVSQFNGMLLMRN-TPSIIEFGKI---LGSLVKMKHFPTAISLSKQMEVKGI------ 163
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
EPDLV + ++N Q F V ++ K G +P+ M+ + G+
Sbjct: 164 ------EPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGE 217
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
F K+ G + ++Y L+ + G+ A+ +R +E R +Y
Sbjct: 218 VKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNT 277
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-D 483
+ LC + +A ++ S R P IT++ LI G + S+ M
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNS-RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLK 336
Query: 484 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
+ P++ T ++ + +AK L T+ +KP+ TYS++
Sbjct: 337 NINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEG-------------VKPNVVTYSTL 383
Query: 544 LEASATAHQWEYFEYVYKGMA 564
++ + + ++ M
Sbjct: 384 MDGYCLVGEVHNAKQIFHAMV 404
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 153/373 (41%), Gaps = 34/373 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G +A+ + D G + D+ + Y L+ L K G A+R+ M+
Sbjct: 188 LIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT---YGTLMNGLCKVGNTSAAIRLLRSMV 244
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N P++ AY+++ +L + + E L M K + PD+
Sbjct: 245 QK-NCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKG---------------ISPDIF 288
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN++++A +WK V + ++ S + P+ + ++ + + G + H+ M
Sbjct: 289 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 348
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G +TY L+ +++EAV M +G V Y L C R
Sbjct: 349 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 408
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNA 494
AM ++E++ SL+ +T+ LI G + I++F M + P++ T
Sbjct: 409 DKAMGLLEQM-SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 467
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+L +N ++A L + +G+ L D Y+ ++ A + E
Sbjct: 468 LLDYLCKNHHLAEAMVLLKAI-------------EGSNLDADILVYNIAIDGMCRAGELE 514
Query: 555 YFEYVYKGMALSG 567
++ ++ G
Sbjct: 515 AARDLFSNLSCQG 527
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/331 (18%), Positives = 126/331 (38%), Gaps = 29/331 (8%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD +N ++ + +F + G +P TYG M + + G
Sbjct: 179 QPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIR 238
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
R M + + Y ++ + ++ ++ EA M +G+ Y L LC
Sbjct: 239 LLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALC 298
Query: 431 NNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
N W+ V + + +SK P + F+ ++ + G I + M K EP
Sbjct: 299 NLCEWKH---VTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 355
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++ T A++ + +A ++F+ P+ +Y+ ++
Sbjct: 356 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV-------------PNVRSYNILINGY 402
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL--LEHA---FDSLLEAG 602
+ + + + M+L G D + L+ G CH+ L+HA F ++ +G
Sbjct: 403 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI-----HGLCHVGRLQHAIALFHEMVASG 457
Query: 603 EIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+IP + + +L + +A+ L+ A+
Sbjct: 458 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 488
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/380 (18%), Positives = 129/380 (33%), Gaps = 51/380 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P V + +L + + V + Q+ G+ P T + + +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G T+ L+R EGKI EA+ G Y L LC
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
G A I+ LR SM ++ +C PN+
Sbjct: 230 VGNTSAA------IRLLR---------------SM--------------VQKNCRPNVIA 254
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ ++ ++A LF E S PD +TY+S++ A
Sbjct: 255 YNTIIDSLCKDRQVTEAFNLFSEMITKGIS-------------PDIFTYNSLIHALCNLC 301
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+W++ + M S + + ++ + G + D +++ G P + +T
Sbjct: 302 EWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYT 361
Query: 612 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 671
++ ++S ++AV + + M + R + L DK LL +
Sbjct: 362 ALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 421
Query: 672 NAASSEITVSNLSRALHALC 691
+ +T + L +H LC
Sbjct: 422 GLIADTVTYNTL---IHGLC 438
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/513 (20%), Positives = 202/513 (39%), Gaps = 61/513 (11%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
K R++ LV L + E + + M + G + +E + L+ GL KG+
Sbjct: 279 KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A D V +K S FVY L+ + K G+ EA +FN M L+P+ Y
Sbjct: 339 A---FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK-GLFPNDVTYS 394
Query: 269 SVAVTLGQVGLLKELVKLIERMRQ-------KPSKRIKNMHRK---------NWDPV--- 309
+ + + G L + + +M + P + + H K +D +
Sbjct: 395 ILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIAN 454
Query: 310 -LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
L+P++V+Y ++++ + F ++ ++ G+ P+ T+ + + + +
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
++ F +M + +TY VL+ +EG A + M ++G+V Y L
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISG 574
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 488
LC+ GR +A + ++ K E+ F+ L+ G +DD + D C
Sbjct: 575 LCSTGRVSEAREFMNDLQG-EQQKLNEMCFSALLHGYCKEGRLDDAL-------DACREM 626
Query: 489 IGTVNAM-LKVYS-----------RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
+G AM L YS R + K++ ++ L+PD
Sbjct: 627 LGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQ-----------------GLRPD 669
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
Y++M++A+A A + ++ M GC + + L+ + G E
Sbjct: 670 NVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCR 729
Query: 597 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
+L + +P+ + L + N EKA+ L
Sbjct: 730 EMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 762
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/313 (18%), Positives = 124/313 (39%), Gaps = 15/313 (4%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
R D + P + + VLN + Q++ +F ++ SGL+P Y + + +
Sbjct: 169 RLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCEL 228
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+ E +M SG + TY V +R + ++ EAV + +G+ Y
Sbjct: 229 KDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTY 288
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
L LC ++ ++ ++ P E + L+ G+I + +K
Sbjct: 289 CTLVLGLCKVEEFEAGEEMMNEMIEFGFV-PSEAAVSNLVDGLRKKGNIGSAFDLVNKVK 347
Query: 483 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
P++ NA++ ++ +A+ LF N+ G+ L P++ TYS
Sbjct: 348 KFGVAPSLFVYNALINSMCKDGKLDEAESLF------NNMGH-------KGLFPNDVTYS 394
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
++++ + + + M G + ++ L+ + GK + FD ++
Sbjct: 395 ILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIAN 454
Query: 602 GEIPHPLFFTEML 614
G P+ + +T ++
Sbjct: 455 GLKPNVVIYTSLI 467
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 163/414 (39%), Gaps = 45/414 (10%)
Query: 139 FAKNVEWH--PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKL 196
F + VEW+ P + VL++ + T + ++ + M + GL+ L
Sbjct: 518 FGEMVEWNVIPNE------VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+ GL G +A ++ + G + K + ++ LL K GR +AL ML
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLN---EMCFSALLHGYCKEGRLDDALDACREMLG 628
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
+ D+ Y V + +RQ+ + I ++ ++ D L PD V+
Sbjct: 629 R-GVAMDLVCYS---------------VLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVL 672
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y +++A + K F ++ + G P+ TY + + + G D R+M
Sbjct: 673 YTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 732
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
S TY + EG I +A+ + ++ G + Y L C GR Q
Sbjct: 733 ASNSLPNQNTYACFLDYLTSEGNIEKAI-QLHDVLLEGFLANTVTYNILIRGFCKLGRIQ 791
Query: 437 DAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+A ++V I S P I+++ +I G + + I +++ M + P+ N
Sbjct: 792 EAAEVLVNMIDS--GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNF 849
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
++ +KA EL ++ R +KP+ TY+S++ +
Sbjct: 850 LIYGCCVTGELTKAFELRDDMMRRG-------------VKPNRATYNSLIHGTC 890
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 30/292 (10%)
Query: 232 TKLLAILGK----AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+K AI+ + AG+P A+++F L + + D+ +++++ L +
Sbjct: 147 SKTFAIIAERFVAAGKPDRAIKVF-LSMREHGCPQDLHSFNTILDILCK----------- 194
Query: 288 ERMRQKPSKRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
SKR++ M N VL + D+V YN + N + V K++ +
Sbjct: 195 -------SKRVE-MAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVER 246
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
GL P+ TY + ++ ++G+ EFF +M + I +TY +V F G+I A
Sbjct: 247 GLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRA 306
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
M G++ + + Y + LC ++A+L+ E++ + P T+ +I
Sbjct: 307 RKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVK-KGYVPNLTTYNVVIR 365
Query: 464 SSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G++D + + MK D CEPN+ T N ++ + K +FE+
Sbjct: 366 GLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEK 417
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 16/203 (7%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +AL + M+E L P I Y+ + + G LKE + +M+++
Sbjct: 232 RTPKALEVLKEMVER-GLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKERE-------- 282
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
+E D+V Y +++ + K VF ++ G+ PS ATY ++V+ +
Sbjct: 283 -------VEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKK 335
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+ F +M K G TY V++R + G +++A+ + M+ G Y
Sbjct: 336 DSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTY 395
Query: 423 YELACCLCNNGRWQDAMLVVEKI 445
C+ G + + + EK+
Sbjct: 396 NVAIRYFCDAGDVEKGLSMFEKM 418
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 16/182 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL +AG+ EA F L +++ + D+ Y ++ G VG +K K+ M
Sbjct: 255 YNILLKGYFRAGQLKEAWEFF-LQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEM 313
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + P YNA++ + +F+++ K G P+
Sbjct: 314 VGEG---------------ILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLT 358
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + + +G D EF +M G TY V +R F + G + + ++ M
Sbjct: 359 TYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKM 418
Query: 411 EQ 412
Q
Sbjct: 419 GQ 420
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 97/235 (41%), Gaps = 15/235 (6%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
VF +R+ G ++ ++++ +S + ++ + K+ + ++Y ++ +
Sbjct: 169 VFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWC 228
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ +A+ ++ M +RG+ T + Y L G+ ++A ++K R +
Sbjct: 229 LIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKE-REVEIDV 287
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+T ++ G I +F M + P+ T NAM++V + D A +FEE
Sbjct: 288 VTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEE 347
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+ GY P+ TY+ ++ A + + M GC+
Sbjct: 348 MVK---KGYV----------PNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCE 389
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 202/531 (38%), Gaps = 72/531 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKG ++ +A+ +L + + + YT ++ L KA A +F M+
Sbjct: 175 LLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMI 234
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ + P+ Y+ + +G KE+V+++E+M + L+PD
Sbjct: 235 DN-GVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARG---------------LKPDCY 278
Query: 316 VYNAVLN-ACV-----------------PSHQWKGVFW--------------VFKQLRKS 343
Y ++LN C P H +F+ +F ++R+
Sbjct: 279 TYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQH 338
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
GL P+ YG ++ + + G+ D F +M G + + LV K A
Sbjct: 339 GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERA 398
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
V M +G+ A + L C LCN GR + +++ ++ + +P ++T LI
Sbjct: 399 EELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV-GVRPDAFSYTPLIS 457
Query: 464 SSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
G D+ +F M P T N +L Y A LF E R
Sbjct: 458 GYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG--- 514
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+ P TY+++L ++ + +Y M SG + D + +L
Sbjct: 515 ----------VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGL 564
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV---ALINAMAYAPFH 639
++ F SL G + + FT M+ + E A+ A I A P
Sbjct: 565 CKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNV 624
Query: 640 ITERQWTE-LFESNEDRISRDKLEKLLNAL-CNCNAASSEITVSNLSRALH 688
+T R E L E S ++ + L +A+ N A +S++ + + R LH
Sbjct: 625 VTYRLVAENLIEEG----SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 671
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 96/254 (37%), Gaps = 19/254 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ L + + + +M G+ L+ G G +A V D G+
Sbjct: 420 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFD---GMV 476
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ Y LL A R +A +F ML + P + Y+++ L Q
Sbjct: 477 SIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK-GVTPGVVTYNTILHGLFQTKRF 535
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E +L M +K D+ YN +LN S+ F +F+ L
Sbjct: 536 SEAKELYLNMINSGTK---------------CDIYTYNIILNGLCKSNCVDEAFKMFQSL 580
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
GL+ + T+ + + +L+ G+ + + F + +G +TY+++ EEG +
Sbjct: 581 CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSL 640
Query: 401 NEAVAAVRNMEQRG 414
E + ME+ G
Sbjct: 641 EEFDSLFSAMEKNG 654
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 29/267 (10%)
Query: 338 KQLRKSGLK--PSAATYGLAMEVMLQSGKYDLVHEF--FRKMAKSGEAIGALTYKVLVRA 393
+ +R+ +K P+ TY + + + + G+ L H F F + K+G + + L++
Sbjct: 85 RMVRECSIKVAPNTCTYSILIGCLCRMGR--LKHSFATFGLILKTGWRVNDIVINQLLKG 142
Query: 394 FWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--LRH 450
+ ++ EA+ ++ M + G Y L CN R ++A+ ++ + + R
Sbjct: 143 LCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRS 202
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
P +T+T +I D +FQ M D+ +PN T N ++ Y K K
Sbjct: 203 CPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLS---IGKWK 259
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
E+ + + ++ G LKPD YTY S+L + F + LS
Sbjct: 260 EVVQMLEKMSARG----------LKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLS--- 306
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFD 596
H + S KC +++ A D
Sbjct: 307 ---PDHHIFNIFFSAYAKCGMIDKAMD 330
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/403 (19%), Positives = 156/403 (38%), Gaps = 34/403 (8%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
GL L++GL +G A+ + D + G + ++ + Y L+ L K G
Sbjct: 132 GLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT---YGTLINGLCKVGNT 188
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+ A+R+ M E N PD+ Y S+ +L + + E L +M +
Sbjct: 189 NAAIRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG---------- 237
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
+ PD+ Y +++++ +WK V + Q+ S + P + ++ + + GK
Sbjct: 238 -----ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 292
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
H+ M G +TY L+ + +++EAV M G Y
Sbjct: 293 ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 352
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
L C R A + E++ + P +T+ L+ G + D I++F M H
Sbjct: 353 LINGYCKIQRMDKATYLFEEMCQ-KELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAH 411
Query: 485 CE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
+ P++ T +L + +A L + +G+ + PD Y+ +
Sbjct: 412 GQIPDLATYRILLDYLCKKSHLDEAMALLKTI-------------EGSNMDPDIQIYTIV 458
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
++ A + E ++ ++ G + + + ++ R G
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRG 501
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 127/320 (39%), Gaps = 33/320 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F YT L+ L + N M+ + PD+ + +V L + G + E +++
Sbjct: 243 FTYTSLIHSLCNLCEWKHVTTLLNQMINS-KIMPDVVIFSTVVDALCKEGKITEAHDVVD 301
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKP 347
M + +EP++V YNA+++ C+ S + V VF + +G P
Sbjct: 302 MMIIRG---------------VEPNVVTYNALMDGHCLQSEMDEAV-KVFDTMVHNGYAP 345
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ +Y + + + D F +M + +TY L+ G++ +A+A
Sbjct: 346 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALF 405
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M G + + Y L LC +AM +++ I+ ++I +T +I
Sbjct: 406 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI-YTIVIDGMCR 464
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G ++ IF ++ PN+ T M+ R + +A +LF E
Sbjct: 465 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM----------- 513
Query: 527 SGDGAPLKPDEYTYSSMLEA 546
DG PD TY+++ +
Sbjct: 514 --DGNGCSPDGCTYNTITQG 531
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 145/397 (36%), Gaps = 59/397 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P V +N +L + + Q+ VF + Q+ G+ P T + + +
Sbjct: 65 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G T+ L+R EGKI +A+ M G Y L LC
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
G A I+ LR SM+ G+ C+P++
Sbjct: 185 VGNTNAA------IRLLR---------------SMEQGN--------------CQPDVVV 209
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+++ ++ ++A LF + G + PD +TY+S++ +
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMV-------------GQGISPDIFTYTSLIHSLCNLC 256
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+W++ + M S D + ++ + GK D ++ G P+ + +
Sbjct: 257 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYN 316
Query: 612 EMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISR-DKLEKLLNA 667
++ +QS ++AV + + M YAP I+ + +I R DK L
Sbjct: 317 ALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYC----KIQRMDKATYLFEE 372
Query: 668 LCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAH 704
+C + +T + L +H LC + +D + H
Sbjct: 373 MCQKELIPNTVTYNTL---MHGLCHVGRLQDAIALFH 406
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 142/365 (38%), Gaps = 60/365 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD+ N ++N+ ++ F V ++ K GL+P AT+ + + GK
Sbjct: 98 IPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDAL 157
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F KM G +TY L+ + G N A+ +R+MEQ VY + L
Sbjct: 158 HLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSL 217
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI---------------ISSMDGGHIDDC 474
C + + +A + K+ + P T+T LI ++ M I
Sbjct: 218 CKDRQVTEAFNLFSKMVG-QGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 276
Query: 475 ISIFQHMKD---------------------HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
+ IF + D EPN+ T NA++ + +A ++F+
Sbjct: 277 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 336
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
+GY P+ +Y++++ + + Y+++ M CQ +
Sbjct: 337 TMVH---NGYA----------PNVISYNTLINGYCKIQRMDKATYLFEEM----CQKELI 379
Query: 574 KHAWLLVEASRAGKCHL--LEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
+ + G CH+ L+ A F ++ G+IP + +L +S+ ++A+A
Sbjct: 380 PNT-VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 438
Query: 629 LINAM 633
L+ +
Sbjct: 439 LLKTI 443
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 19/209 (9%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
K + + Y L+ L GR +A+ +F+ M+ + PD+A Y + L + L
Sbjct: 376 KELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI-PDLATYRILLDYLCKKSHLD 434
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
E + L+ K + N DP D+ +Y V++ + + + +F L
Sbjct: 435 EAMALL-----------KTIEGSNMDP----DIQIYTIVIDGMCRAGELEAARDIFSNLS 479
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
GL+P+ TY + + + + G D ++ F +M +G + TY + + + +
Sbjct: 480 SKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEAL 539
Query: 402 EAVAAVRNMEQRGV---VGTASVYYELAC 427
A+ ++ M RG V T ++ E+ C
Sbjct: 540 RAIQLLQEMLARGFSADVSTTTLLVEMLC 568
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 189/452 (41%), Gaps = 46/452 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL D + +QA+ +L + K + L YT ++ L + G+ +A +F+ ML
Sbjct: 176 LLKGLCDDKTSQQALDLLHIMADHKGRCPLDV-VAYTTVINGLLREGQLDKAYSLFDAML 234
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D PD+ Y S+ L + + + ++ RM +KN + PD +
Sbjct: 235 -DRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM-------VKNG--------VMPDCI 278
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+Y ++++ S + K +FK++ + G++P TY M+ + ++GK + F +
Sbjct: 279 MYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSL 338
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G + TY L+ + EG + E + M ++G+ ++ + + +
Sbjct: 339 VKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKV 398
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 494
+A+LV ++ + P + + ++ G +DD +S F +K + PNI
Sbjct: 399 DEALLVFSNMRQ-QGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTT 457
Query: 495 MLKVYSRNDMFSKAKEL-FEETTRANSSGYTFLSGDGAPL-------------------- 533
++ D + K +EL FE R F + L
Sbjct: 458 LIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIG 517
Query: 534 -KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
+P+ TY+++++ + + + M +G + + ++ S+ G+ +E
Sbjct: 518 IEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR---IE 574
Query: 593 HAFDSLLEA-GEIPHPLFFT-EMLIQAIVQSN 622
L E G+ +P T EML+Q + Q+
Sbjct: 575 DGLTLLREMDGKGVNPGIVTYEMLLQGLFQAG 606
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 136/359 (37%), Gaps = 50/359 (13%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+V Y V+N + Q + +F + G P TY + + ++ D + F
Sbjct: 206 DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 265
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M K+G + Y LV + GK EA+ + M + GV Y L LC N
Sbjct: 266 TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKN 325
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS--------------------SMDGGH-- 470
G+ +A + + + H KP T+ L+ M GH
Sbjct: 326 GKSTEARKIFDSLVKRGH-KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 384
Query: 471 -------------IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+D+ + +F +M+ P+I +L D+ A + + +
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVL------DILCTAGRVDDALS 438
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
+ NS L +G L P+ +++++ T +W+ E + M G LD
Sbjct: 439 QFNS-----LKSEG--LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFN 491
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 635
++ + G+ ++ FD ++ G P+ + ++ + ++A+ L+ M +
Sbjct: 492 AIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVF 550
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 155/373 (41%), Gaps = 26/373 (6%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ LS+ + K + M ++G+M L+ G G ++A+ + +
Sbjct: 248 IISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHG 307
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ YT L+ L K G+ EA +IF+ +++ + PD Y ++ G L
Sbjct: 308 VEPDV---VTYTALMDYLCKNGKSTEARKIFDSLVKRGH-KPDSTTYGTLLHGYATEGAL 363
Query: 281 KELVKLIERMRQKPSK---RIKNM-------HRKNWDPVL----------EPDLVVYNAV 320
E+ L++ M +K + I NM H K + +L PD+V Y V
Sbjct: 364 VEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTV 423
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
L+ + + F L+ GL P+ + + + K+D V E +M G
Sbjct: 424 LDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGI 483
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ + + ++ ++G++ EA M + G+ + Y L C +G+ +AM
Sbjct: 484 CLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMK 543
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
++ + KP ++T+ +I G I+D +++ + M P I T +L+
Sbjct: 544 LL-GVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL 602
Query: 500 SRNDMFSKAKELF 512
+ AKEL+
Sbjct: 603 FQAGRTVAAKELY 615
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 112/286 (39%), Gaps = 54/286 (18%)
Query: 370 EFFRKMAKSGEAIGA---LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F +M ++G A TY +++ G+++ A A V + G+ + ++ L
Sbjct: 82 SLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLL 141
Query: 427 CCLCNNGRWQDAMLVVEK-----------------IKSLRHSK----------------- 452
LC+ R DAM +V + +K L K
Sbjct: 142 KGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKG 201
Query: 453 --PLEIT-FTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKA 508
PL++ +T +I + G +D S+F M D P++ T ++++ S+ KA
Sbjct: 202 RCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKA 261
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
++F TR +G + PD Y+S++ ++ + + ++K M G
Sbjct: 262 TQVF---TRMVKNG----------VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGV 308
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ D + L+ + GK FDSL++ G P + +L
Sbjct: 309 EPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLL 354
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 16/147 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ ++ L K GR EA +F+LM+ + P+ Y+++ G + E +KL+ M
Sbjct: 490 FNAIMGNLCKKGRVIEAKNLFDLMVR-IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVM 548
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K P V YN ++N + + + + +++ G+ P
Sbjct: 549 VFNGVK---------------PSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIV 593
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAK 377
TY + ++ + Q+G+ E + +M K
Sbjct: 594 TYEMLLQGLFQAGRTVAAKELYLRMIK 620
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 140/336 (41%), Gaps = 18/336 (5%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
+ +L+ C S ++ ++K G+ PS A+ L +E ++ + +Y+ + F ++ +
Sbjct: 116 DMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVE 175
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
SG Y ++A + G + A+ + M++ GV VY + LC R +D
Sbjct: 176 SGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKD 235
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAML 496
A + +++ R P IT+ LI G +++ +I + MK ++ EP I T N++L
Sbjct: 236 AEKLFDEMLD-RRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLL 294
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
R M +A+ + EE Y F+ PD +TY+++ + +
Sbjct: 295 NGLCRAQMMEEAQRVLEEMEV-----YGFV--------PDRFTYTTLFDGHLKCGNVDAS 341
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
+ + G Q+ + LL + G E LE G P +FF ++
Sbjct: 342 ITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNG 401
Query: 617 AIVQSNYEKAVALI---NAMAYAPFHITERQWTELF 649
+ KA I A+ P H+T + F
Sbjct: 402 YCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKF 437
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 167/407 (41%), Gaps = 47/407 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
FVY ++ L K R +A ++F+ ML D + P+ Y+++ +VG L+E + E
Sbjct: 218 FVYNVVIGGLCKEKRMKDAEKLFDEML-DRRVAPNRITYNTLIDGYCKVGQLEEAFNIRE 276
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RM+ ++N +EP ++ +N++LN + + V +++ G P
Sbjct: 277 RMK------VEN---------VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPD 321
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + L+ G D + + G I T +L+ A +EG + +A ++
Sbjct: 322 RFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLK 381
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+ G+ + + C G A +EK++++ +P +T+ L+ +
Sbjct: 382 KFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAV-GLRPNHVTYNSLVKKFCEM 440
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
++++ + M + PN+ T N ++ Y R+ +F + ++ EE +
Sbjct: 441 KNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG-------- 492
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
LKP+ +Y ++ E + M G + + L+ + AGK
Sbjct: 493 -----LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L+ AF FF EM+ + IV + + LIN +
Sbjct: 548 ---LKDAFR------------FFDEMVAREIVPTLVTYNI-LINGLC 578
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 165/425 (38%), Gaps = 57/425 (13%)
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
+ R+ + +LD+ + LL L K G +A + LE+ L P
Sbjct: 348 AVRKGVQILDYTCSI--------------LLNALCKEGNMEKAEEVLKKFLEN-GLAPVG 392
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSK-----------RIKNMH------RK 304
++++ QVG + + IE+M +P+ +KNM +K
Sbjct: 393 VFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKK 452
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
+ + P++ YN +++ S + F + +++ K GLKP+ +YG + + +
Sbjct: 453 MVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDAN 512
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
M G A Y +L+ GK+ +A M R +V T Y
Sbjct: 513 ILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNI 572
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLE---ITFTGLIISSMDGGHIDDCISIFQHM 481
L LC G+ +A E + S K L IT+ LI G++ + +++ M
Sbjct: 573 LINGLCKKGKVMEA----ENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETM 628
Query: 482 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
K +P + T + ++ + + K +++E + N L PD Y
Sbjct: 629 KKSGIKPTLNTYHRLIAGCGKEGLVLVEK-IYQEMLQMN-------------LVPDRVIY 674
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
++++ + ++ M G Q D+ + L++ + G+ H +++ + +
Sbjct: 675 NALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKI 734
Query: 601 AGEIP 605
G IP
Sbjct: 735 RGLIP 739
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 20/250 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL KG +A ++ + D+ Y L++ AG +AL ++ M
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSFDV---ITYNSLISGYSSAGNVQKALELYETM- 628
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P + YH + G+ GL+ L+E++ Q+ M + N L PD V
Sbjct: 629 KKSGIKPTLNTYHRLIAGCGKEGLV-----LVEKIYQE-------MLQMN----LVPDRV 672
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+YNA+++ V + + + G++P TY + + G+ V M
Sbjct: 673 IYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDM 732
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G TY +L+ + + A R M + G + S+ L L GR
Sbjct: 733 KIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRS 792
Query: 436 QDAMLVVEKI 445
DA ++ ++
Sbjct: 793 HDADVICSEM 802
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 125/312 (40%), Gaps = 28/312 (8%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL L A R EA+ + + + P+ +Y V LK L M Q+
Sbjct: 198 LLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIV---------LKALCD--NSMSQR 246
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
++ M ++ PD+V Y+ V++ + +F ++ + G+KP TY
Sbjct: 247 ALDLLQMMAKQGG--ACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYN 304
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
L ++ + ++ D R+M G +TY ++ + G++ EA R M++R
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKR 364
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G++ LC +GR ++A + + + H KP ++ L+ G D
Sbjct: 365 GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH-KPDIFSYCTLLHGYASEGCFAD 423
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
I +F MK + N ++ Y++ M A +F E + S
Sbjct: 424 MIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVS----------- 472
Query: 533 LKPDEYTYSSML 544
PD TYS+++
Sbjct: 473 --PDVVTYSTVI 482
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/438 (18%), Positives = 171/438 (39%), Gaps = 46/438 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ ++ GR EA ++F M + L P+I +S +L + G KE + + M
Sbjct: 338 YSCMIHGYATLGRLKEAAKMFREMKKR-GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSM 396
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K K PD+ Y +L+ + + +F ++ +G+ +
Sbjct: 397 TAKGHK---------------PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCH 441
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ + + + G D F +M + G + +TY ++ F G++ +A+ M
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
RG+ +VY + C +G A +V ++ + +P + F+ +I S G
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561
Query: 471 IDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ D IF D E P + T N+++ Y KA ++ + +
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAM-------------E 608
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
++PD TY+++L+ + +++ M G + + + +L RAG+
Sbjct: 609 VVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTV 668
Query: 590 LLEHAFDSLLEAGEIPHPLFF---------------TEMLIQAIVQSNYEKAVALINAMA 634
F ++E+G + +L Q + N + ++ ++N M
Sbjct: 669 AARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMI 728
Query: 635 YAPFHITERQWT-ELFES 651
A + + ++ ELF +
Sbjct: 729 NAMYKVQRKEEAKELFAT 746
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 114/252 (45%), Gaps = 17/252 (6%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
++ ++ L K GR +A IF+L D P + ++S+ VG + + K+++ M
Sbjct: 549 FSSVINSLCKDGRVMDAHDIFDLA-TDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAM 607
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+EPD+V YN +L+ + + +F+++++ G+KP+
Sbjct: 608 EVVG---------------VEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTV 652
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYG+ + + ++G+ + F +M +SG + Y +++ +EA+ + +
Sbjct: 653 TYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL 712
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
V + ++ + + R ++A + I S P E T+ +II+ + G
Sbjct: 713 GTMNVKFSITILNTMINAMYKVQRKEEAKELFATI-SASGLLPNESTYGVMIINLLKDGG 771
Query: 471 IDDCISIFQHMK 482
++D ++F M+
Sbjct: 772 VEDANNMFSSME 783
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 94/261 (36%), Gaps = 47/261 (18%)
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV-A 405
P+ TY + M+ ++ + DL F + ++G + +T L++ + EAV
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M + G V A Y + LC+N Q A+
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRAL-------------------------- 248
Query: 466 MDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
D + + C P++ + ++ + KA LF E TR
Sbjct: 249 -------DLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQG------ 295
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+KPD TY+ +++A A + E V + M G Q D ++ ++ +
Sbjct: 296 -------VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATL 348
Query: 586 GKCHLLEHAFDSLLEAGEIPH 606
G+ F + + G IP+
Sbjct: 349 GRLKEAAKMFREMKKRGLIPN 369
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +LA L +AGR A + F+ M+E VT+ G++ L
Sbjct: 654 YGIMLAGLFRAGRTVAARKKFHEMIES-----------GTTVTVSIYGII-----LGGLC 697
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R + + +K ++ + + N ++NA + + +F + SGL P+ +
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNES 757
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TYG+ + +L+ G + + F M KSG G+ ++R E+G+I +A + +
Sbjct: 758 TYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQD 437
+ + ++ AS + G++Q+
Sbjct: 818 DGKRILLEASTTSLMLSLFSRKGKYQE 844
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 161/394 (40%), Gaps = 30/394 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P +V YN ++N S++ +F++L K G P TY ++ + ++G +
Sbjct: 77 VAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEAR 136
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG--VVGTASVYYELAC 427
M+ G +TY VL+ + G+I+EA ++ M ++ V+ Y
Sbjct: 137 RLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 196
Query: 428 CLCNNGRWQDAMLVVEKIK--SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC 485
LC +A ++ ++ SLR S P +TF+ LI G D+ + +
Sbjct: 197 GLCKQSMTAEACELMRSLRDGSLRVS-PDTVTFSTLIDGLCKCGQTDEACN-DDMIAGGY 254
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
PN+ T NA++ + D +A + E G T PD TYS +++
Sbjct: 255 VPNVVTYNALVNGLCKADKMERAHAMIESMV---DKGVT----------PDVITYSVLVD 301
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL---LVEASRAGKC-HLLEHAFDSLLEA 601
A A + + + GMA GC + + L ++ R+G+ + ++ +L
Sbjct: 302 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRML-- 359
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL 661
+P + F ++ A N+E+A AL M + L + +
Sbjct: 360 --VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAA 417
Query: 662 EKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
+L+ + N + +T + L +H LC+S +
Sbjct: 418 RDILDLMGNLGVPPNVVTYNVL---VHGLCKSGR 448
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 160/413 (38%), Gaps = 47/413 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KAG EA R+ M P++ Y + L +VG + E +LI+ M
Sbjct: 119 YNTLIDSLCKAGDLEEARRLHGGMSSR-GCVPNVVTYSVLINGLCKVGRIDEARELIQEM 177
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK--PS 348
RK+ D + P+++ YN+ L+ + + LR L+ P
Sbjct: 178 T-----------RKSCDVL--PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 224
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T+ ++ + + G+ D M G +TY LV + K+ A A +
Sbjct: 225 TVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIE 282
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT----GLIIS 464
+M +GV Y L C R +A+ ++ + S R P +TF GL S
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS-RGCTPNVVTFNSIIDGLCKS 341
Query: 465 SMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G + ++ M P+ T N ++ + F +A LFEE N
Sbjct: 342 DRSGEAFQIALQVYNRML---VPDKVTFNILIAGACKAGNFEQASALFEEMVAKN----- 393
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
++PD T+ ++++ A Q E + M G + + L+ +
Sbjct: 394 --------MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCK 445
Query: 585 AGK----CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+G+ C LE ++ +G +P + + ++ S + A+ L++ +
Sbjct: 446 SGRIEEPCEFLEE----MVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKL 494
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 138/352 (39%), Gaps = 36/352 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL +A ++++ + DK Y+ L+ KA R EAL + + M
Sbjct: 264 LVNGLCKADKMERAHAMIE---SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 320
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P++ ++S+ L + S + + ++ +L PD V
Sbjct: 321 SR-GCTPNVVTFNSIIDGL---------------CKSDRSGEAFQIALQVYNRMLVPDKV 364
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N ++ + ++ +F+++ ++P T+G ++ + ++G+ + + M
Sbjct: 365 TFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLM 424
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +TY VLV + G+I E + M G V + Y L LC R
Sbjct: 425 GNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRT 484
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVN 493
DA+ +V K+KS P +T+ L+ G + I++ + M K H +P+ T
Sbjct: 485 DDALQLVSKLKSFGW-DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH-QPDSFTFA 542
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
A R+ + EL + PD T SS+L+
Sbjct: 543 ACFGGLHRSGNLAGTMELLRVVLAKG-------------MLPDATTCSSILD 581
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 31/308 (10%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ + D + ++ K+ L + ++ +A + EA+ FN+M E +L P++ A
Sbjct: 148 RQYKLMWDLINAMRKKKMLNVE-TFCIVMRKYARAQKVDEAIYAFNVM-EKYDLPPNLVA 205
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
++ + L + +++ ++ E MR + PD Y+ +L
Sbjct: 206 FNGLLSALCKSKNVRKAQEVFENMRDR----------------FTPDSKTYSILLEGWGK 249
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
VF+++ +G P TY + ++++ ++G+ D R M S
Sbjct: 250 EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFI 309
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y VLV + E ++ EAV ME+ G+ +V+ L C R ++ V++++K
Sbjct: 310 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 369
Query: 447 S---LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRND 503
S +SK I LI + G D+ +F+ M CEP+ T ++K
Sbjct: 370 SKGVTPNSKSCNIILRHLI----ERGEKDEAFDVFRKMIKVCEPDADTYTMVIK------ 419
Query: 504 MFSKAKEL 511
MF + KE+
Sbjct: 420 MFCEKKEM 427
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 17/189 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F+Y+ L+ G R EA+ F L +E + D+A ++S+ + +K + ++
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTF-LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++ M+ K + P+ N +L + + F VF+++ K +
Sbjct: 365 LKEMKSKG---------------VTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CE 408
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P A TY + +++ + + + + ++ M K G T+ VL+ EE +A
Sbjct: 409 PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVL 468
Query: 407 VRNMEQRGV 415
+ M + G+
Sbjct: 469 LEEMIEMGI 477
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+ +L+ L D G +A+ +L ++ +KR +Y +L+ LGK + + ++
Sbjct: 470 MSMLESLCDAGKTTEALDLLSKIH---EKRISTDTVMYNTVLSALGKLKKTSDLHDLYEK 526
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M +D PDI +Y+ + + G+ G ++E VK+ E + K PD
Sbjct: 527 MKQD-GPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCK---------------PD 570
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
++ +N+++N + FK++R+ GL P TY +E ++ K ++ F
Sbjct: 571 IISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFD 630
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+M G + +TY +L+ G+ EAV ++Q+G+ + Y
Sbjct: 631 EMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 679
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 28/271 (10%)
Query: 196 LLKGLGDKGSWRQAMSVL----DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
L++ L G +A +L DW + + RD Y +L L AG+ EAL +
Sbjct: 435 LVRTLSKLGHASEAHRLLHLQYDWSFHDEGDRD-----AYMSMLESLCDAGKTTEALDLL 489
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-PSKRIKNMHRKNWDPVL 310
+ + E + D Y++V LG++ +L L E+M+Q PS
Sbjct: 490 SKIHEK-RISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPS--------------- 533
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
PD+ YN ++++ + + + +F++L S KP ++ + + ++G D H
Sbjct: 534 -PDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHM 592
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F++M + G + +TY L+ F + K+ A M G Y L CL
Sbjct: 593 RFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLE 652
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 461
+GR +A+ + K+K + P IT+ L
Sbjct: 653 RSGRTAEAVDLYAKLKQ-QGLTPDSITYAVL 682
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 144/361 (39%), Gaps = 64/361 (17%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD Y + G++G E + L + M +K P+L+ YN ++
Sbjct: 325 PDEYTYTIMIRMTGKIGKADESLTLFQEMTEKG---------------YTPNLIAYNTMI 369
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML---QSGKYDLVHE-------- 370
A + ++F ++ ++ +P+ T+ + + V++ Q G+ D V E
Sbjct: 370 QALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNK 429
Query: 371 -----FFRKMAKSGEAIGAL------------------TYKVLVRAFWEEGKINEAVAAV 407
R ++K G A A Y ++ + + GK EA+ +
Sbjct: 430 SIYAYLVRTLSKLGHASEAHRLLHLQYDWSFHDEGDRDAYMSMLESLCDAGKTTEALDLL 489
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ ++ + +Y + L + D + EK+K S P ++ LI S
Sbjct: 490 SKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPS-PDIFSYNILISSFGR 548
Query: 468 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +++ + IF+ +++ C+P+I + N+++ +N +A F+E +
Sbjct: 549 AGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKE-----------M 597
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+G L PD TYS+++E + E ++ M GC + + LL R+G
Sbjct: 598 REEG--LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSG 655
Query: 587 K 587
+
Sbjct: 656 R 656
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 138/364 (37%), Gaps = 79/364 (21%)
Query: 229 FVYTKLLAILGK--AGRPHEALRIFNLMLED---CNLYPDIAAYHSVAVTLGQVGLLKEL 283
F Y +LL IL K A R E L + +L+D C + I+ + + G ++
Sbjct: 153 FTYNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGSISTINILIGIFGGGADVERC 212
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
L+ K WD L+ + Y +L A + S+ F V+ +LR+
Sbjct: 213 FDLV----------------KKWD--LQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRR 254
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G K Y + ++ + + K LT+ +L+ ++
Sbjct: 255 GYKLDIFAYNMLLDALAKDNK--------------------LTWNLLLVCLQIAELLDCL 294
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
A+ N + V D + +V K +H +P E T+T +I
Sbjct: 295 TVALDNDKIISV-------------------EVDQVYMVFKDMKRKHCEPDEYTYTIMIR 335
Query: 464 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ G D+ +++FQ M + PN+ N M++ + N M K LF + N
Sbjct: 336 MTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNC-- 393
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+P+ +T+S +L Q + V + +S ++++ +A+L+
Sbjct: 394 -----------RPNGFTFSVILNVLVAEGQLGRLDEV---VEVSNKFMNKSIYAYLVRTL 439
Query: 583 SRAG 586
S+ G
Sbjct: 440 SKLG 443
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 130/318 (40%), Gaps = 21/318 (6%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN +L S + V+ + + +G P+ TYG + + Q+ +++ FR MA
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G + +Y +L+ K++EA + M G Y L LC G+ +
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 495
+A+ + ++ R P + + LI G + + +F+ M + C P + T N++
Sbjct: 140 EAVDLFSRM-VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
L +SR F + + LF++ R P+ +T++++L+
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCV-------------PNIFTFNNLLDGFCKMGDMVE 245
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
++ M GC D + L+ GK H + ++ +G P +++
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP------DIVS 299
Query: 616 QAIVQSNYEKAVALINAM 633
I+ Y K+ AL +A+
Sbjct: 300 YNILIDGYSKSGALDHAI 317
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 149/391 (38%), Gaps = 69/391 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ L + +A SV G+ + + F Y+ L+A L + + EA + N M+
Sbjct: 58 LLRSLCQAQRFEEARSVFR---GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P++ Y S+ L ++G LKE V L RM + PD V
Sbjct: 115 -DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCP---------------PDGV 158
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN +++ + +F+++ + G P+ TY + + G++ V F+ M
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G T+ L+ F + G + EA M G Y L +C+ G+
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKP 278
Query: 436 QDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA 494
+A L+ E I+S P+I + N
Sbjct: 279 HEAQRLLREMIRS------------------------------------GVGPDIVSYNI 302
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ YS++ A +LF E ++ L+PD ++YS++++ A +
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSG-------------LEPDAFSYSTIIDCLCRAGKVG 349
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
V+K M +G D L++ R
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 125/323 (38%), Gaps = 23/323 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLD-WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
LL GL G ++A+ + VY + VY L+ K G EA R+F M
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVY----RGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM 183
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
LE P + Y+S+ + G + L K+M R+ P++
Sbjct: 184 LEK-GCIPTVFTYNSLLSGFSRKGEFGRVQSLF-----------KDMLRQGC----VPNI 227
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+N +L+ +F ++R G P +Y + M GK R+
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLRE 287
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M +SG ++Y +L+ + + G ++ A+ + + G+ A Y + CLC G+
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
A +V + + + S P L+I G + + +FQ M K C P I N
Sbjct: 348 VGAAFVVFKDMIA-NGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406
Query: 494 AMLKVYSRNDMFSKAKELFEETT 516
++ + E+F E T
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHELT 429
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 114/290 (39%), Gaps = 18/290 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ Y +L + + +++ VF+ + G P+ +Y + + + + K D E
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M G +TY L+ + GK+ EAV M RG VY L
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
G +A + E++ + P T+ L+ G S+F+ M + C PNI
Sbjct: 170 KGDMGEAYRLFEEMLE-KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N +L + + +A LF E + G P PD +Y++++ +
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLE-----------MRSLGCP--PDVVSYNTLIRGMCSK 275
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ + + + M SG D + L+ S++G L+HA E
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA---LDHAIKLFYE 322
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 19/298 (6%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D S++ + ++ M + G + T LL G KG + + S+ +
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK---DM 218
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + + F + LL K G EA R+F L + PD+ +Y+++ + G
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF-LEMRSLGCPPDVVSYNTLIRGMCSKGK 277
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E +L+ M + + PD+V YN +++ S +F +
Sbjct: 278 PHEAQRLLREMIRSG---------------VGPDIVSYNILIDGYSKSGALDHAIKLFYE 322
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ KSGL+P A +Y ++ + ++GK F+ M +G A A LV +
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
+ E+ + M + V Y L LC R D + ++ S +EI+
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEIS 440
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 15/219 (6%)
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+Y +EV+ +SG+ D V+ + M +G TY L+R+ + + EA + R M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+G Y L LC + +A ++ ++ H +P +T+ L+ G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLSGLCKMGK 137
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ + + +F M C P+ N ++ +S+ +A LFEE
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI-------- 189
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
P +TY+S+L + ++ + ++K M GC
Sbjct: 190 -----PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 55/126 (43%)
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
E+ ++ R + T+ A P+ YTY +L + A ++E V++GMA GC
Sbjct: 25 EVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCS 84
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
+ ++ L+ R K + +++ G P+ + + +L ++AV L
Sbjct: 85 PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDL 144
Query: 630 INAMAY 635
+ M Y
Sbjct: 145 FSRMVY 150
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 161/391 (41%), Gaps = 31/391 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L R EA R+F + ++ PD AY ++ L Q G + ++L + M
Sbjct: 229 YSTLIKGLCMKHRISEATRLF-MSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEM 287
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + +P L+ Y+ +++ + +FK+++ G+ P
Sbjct: 288 LNDTGR---------YGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVI 338
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+Y + SGK++ F +M G T VL+ ++GK+ EA + +
Sbjct: 339 SYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 398
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
QRG + L LC R A + K++ L P +T L+ G+
Sbjct: 399 IQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKL-GCMPNVVTCATLMKGLCQSGN 457
Query: 471 IDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
I + + ++M +C+PN + + ++ + +A+ELF+E
Sbjct: 458 IKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG---- 513
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
+ PD +Y+S++ + +W+ +Y++ M G Q D T + L+
Sbjct: 514 ---------VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLC 564
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ GK + +++ G IP+ + +T ++
Sbjct: 565 KEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 168/419 (40%), Gaps = 52/419 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ +G+ +A +FN ML D + PD+ + L + G + E KL+E +
Sbjct: 340 YTTLIHGFCLSGKWEKAKCLFNEML-DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 398
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ PD+V ++ H+ +F +++K G P+
Sbjct: 399 IQRGCI---------------PDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVV 443
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG------ALTYKVLVRAFWEEGKINEAV 404
T M+ + QSG + E + M G A++Y +++ + G+ +EA
Sbjct: 444 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 503
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ M+ GV+ Y L C +G+W+DA + ++ + +P TF+ LI
Sbjct: 504 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI-GVQPDVTTFSVLIDM 562
Query: 465 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS--- 520
G + + + + M + C PN T ++K ND S+A +LF + +
Sbjct: 563 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622
Query: 521 --SGYTFLSG-----------------------DGAPLKPDEYTYSSMLEASATAHQWEY 555
+ T + G G KPD +YS +++ + +
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 682
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++K M G + + L+ R+GK +H F+ +++ G + + ++ M+
Sbjct: 683 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 741
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 105/542 (19%), Positives = 214/542 (39%), Gaps = 75/542 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D + + + + +M Q G + L+KGL K +A + + L
Sbjct: 15 VLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 74
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-----PDIAAYHSVAVTL 274
+ D Y L+ L + G+ + AL + ML D + Y P + +Y S+ +
Sbjct: 75 GCRPD---AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY-SIIID- 129
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
GL K+ R + + K M + + PD++ Y ++++ S +W+
Sbjct: 130 ---GLCKD------RREDEARELFKEMKAQG----MMPDVISYTSLIHGFCRSGKWEKAK 176
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+F ++ G++ T + ++++ + GK +E M + G + +TY L++
Sbjct: 177 CLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 236
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
+ +I+EA +M++ G A Y L LC G A+ + H + L
Sbjct: 237 CMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQL--------HQEML 288
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
D G C+P + + + ++ ++ +A+ELF+E
Sbjct: 289 N-----------DTGRYG----------IKCKPTLISYSIIIDGLCKDRREDEARELFKE 327
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ G + PD +Y++++ + +WE + ++ M G Q D T
Sbjct: 328 -----------MKAQG--IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 374
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---IN 631
+ L+ + GK + +++ G IP + T ++ ++ KA L +
Sbjct: 375 SSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQ 434
Query: 632 AMAYAPFHITERQWTE-LFESNEDRISRDKLEKLLNAL------CNCNAASSEITVSNLS 684
+ P +T + L +S +I+ + + +L+ C NA S I + L
Sbjct: 435 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 494
Query: 685 RA 686
+
Sbjct: 495 KC 496
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 155/366 (42%), Gaps = 29/366 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D L ++ + K + ++ Q G + L+KGL K +A + +
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLF---LKM 433
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-----PDIAAYHSVAVTL 274
+ + + L+ L ++G AL + ML D + Y P+ +Y + L
Sbjct: 434 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 493
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G E +L + M+ + PD++ Y ++++ S +WK
Sbjct: 494 CKCGREDEARELFKEMKALG---------------VIPDVISYTSLIHGFCRSGKWKDAK 538
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
++F ++ G++P T+ + ++++ + GK +E M + G +TY LV+
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 598
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS-----LR 449
+I+EA M++ G + Y L LC G + A+ + +K+ S
Sbjct: 599 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 658
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA 508
+ KP I+++ +I G D+ +F+ MK PN+ + +++ + R+ A
Sbjct: 659 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 718
Query: 509 KELFEE 514
K LF E
Sbjct: 719 KHLFNE 724
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ + YT L+ L R EA ++F + ++ PD+ Y ++ L Q G +K +
Sbjct: 585 IPNTVTYTTLVKGLCMNDRISEATQLF-MKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 643
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L ++M + N +PD++ Y+ +++ + +FK+++ G
Sbjct: 644 ELHKKMLSDTGQYGTN---------FKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 694
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ P+ +Y + +SGK + F +M G + A+TY V++ F +EG+I++A+
Sbjct: 695 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 25/251 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W+ A + + + + + D+ + ++ L+ +L K G+ EA + +M+
Sbjct: 524 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTT---FSVLIDMLCKEGKVIEANELLEVMI 580
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y ++ L + E +L +M++ PD+V
Sbjct: 581 QR-GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL---------------PDVV 624
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRK------SGLKPSAATYGLAMEVMLQSGKYDLVH 369
Y ++ + K + K++ + KP +Y + ++ + + G+ D
Sbjct: 625 TYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAR 684
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E F++M G ++Y L+ F GK+ +A M +GV A Y +
Sbjct: 685 ELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 744
Query: 430 CNNGRWQDAML 440
C G+ A+
Sbjct: 745 CKEGQIDKALF 755
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 111/271 (40%), Gaps = 28/271 (10%)
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
G++P T G+ +++ + GK +E M + G + +TY L++ + +I+EA
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-----LVVEKIKSLRHSKPLEITF 458
+M++ G A Y L LC G+ A+ ++ + + KP +++
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET-- 515
+ +I D+ +F+ MK P++ + +++ + R+ + KAK LF E
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 516 ------TRANSSGYTFLSGDGAPLKPDE--------------YTYSSMLEASATAHQWEY 555
+S L +G ++ +E TYS++++ H+
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
++ M GC+ D + L+ + G
Sbjct: 245 ATRLFMSMQKLGCRPDAIAYGTLMKGLCQTG 275
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 21/255 (8%)
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
T VL+ F +EGK+ EA + M QRG + Y L LC R +A + +
Sbjct: 12 TSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSM 71
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKV 498
K L +P I + L+ G I+ + + Q M + C+P + + + ++
Sbjct: 72 KKL-GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDG 130
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
++ +A+ELF+E + G + PD +Y+S++ + +WE +
Sbjct: 131 LCKDRREDEARELFKE-----------MKAQG--MMPDVISYTSLIHGFCRSGKWEKAKC 177
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
++ M G + D T + L+ + GK + +++ G I + ++ ++
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 237
Query: 619 VQSNYEKAVALINAM 633
++ +A L +M
Sbjct: 238 MKHRISEATRLFMSM 252
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/533 (19%), Positives = 202/533 (37%), Gaps = 115/533 (21%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + + G++ L+ G G W++ +L + ++
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM--VR 258
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D + + L+ L K GR EA + +M + PDI Y+++ +
Sbjct: 259 ENVD-PDDYTFNILIDALCKEGRILEAQGVLAMMSKR-GEKPDIVTYNALMEGYCSRENV 316
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E +L RM ++ LEPD++ YN +++ + +FK+L
Sbjct: 317 HEARELFNRMVKRG---------------LEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
L P+ A+Y ++ + SG+ V + +M S + +TY +L+ A +EG+I
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
EA+ + M ++GV KP +T+
Sbjct: 422 LEALGVLVMMMKKGV------------------------------------KPNIVTYNA 445
Query: 461 LIISSMDG----GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+ MDG +++ IF M K EP+I N ++ Y + +M +A LF+E
Sbjct: 446 M----MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
N L PD +Y+S+++ C L + H
Sbjct: 502 RHKN-------------LIPDIASYNSLIDGL--------------------CNLGRIPH 528
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA- 634
++ D + ++G+ P + + +L ++KA++L +
Sbjct: 529 ---------------VQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Query: 635 --YAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSR 685
+ F+ L + + +++ D L+ LL C+ N + I ++ L +
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 153/387 (39%), Gaps = 77/387 (19%)
Query: 110 RENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSERE 169
REN+ E +E+F + + L+ DV +Y VL+D + +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVL---NY--------------------NVLIDGYCKTK 349
Query: 170 MTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF 229
M + + + L+ T L+ GL + G +LD ++G D+ +
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT-- 407
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ L K GR EAL + +M++ + P+I Y+++ + R
Sbjct: 408 -YNILIDALCKEGRILEALGVLVMMMKK-GVKPNIVTYNAM------------MDGYCLR 453
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+K I N K+ LEPD++ YN ++N + +FK++R L P
Sbjct: 454 NNVNVAKDIFNRMVKSG---LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI 510
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF--------------- 394
A+Y ++ + G+ V E +M SG++ +TY +L+ AF
Sbjct: 511 ASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ 570
Query: 395 -----WEEGKINEAVA--------------AVRNMEQRGVVGTASVYYELACCLCNNGRW 435
W + N A+ A++++ G Y L LC +G +
Sbjct: 571 IVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSF 630
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLI 462
+AML++ K++ P ITF +I
Sbjct: 631 GEAMLLLSKMED-NDRPPDAITFEIII 656
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/384 (18%), Positives = 153/384 (39%), Gaps = 22/384 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P V++ +L A V + +F QL+ G+ PS AT+ + +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+ KSG +T+ ++ F G I +A+ +N+ +G + Y L L
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
NG+ + A+ ++++++ +P + ++ LI G + D + + + + +
Sbjct: 173 NGQIKAALHLLQEMEK-SSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N+++ + + +L + R N + PD+YT++ +++A
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVREN-------------VDPDDYTFNILIDALCKE 278
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ + V M+ G + D + L+ H F+ +++ G P L +
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE--SNEDRISRDKLEKLLNAL 668
++ ++A+ L + T + L + N RIS K KLL+ +
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK--KLLDEM 396
Query: 669 CNCNAASSEITVSNLSRALHALCR 692
+ +A ++ N+ + ALC+
Sbjct: 397 -HGSAQPPDVVTYNI--LIDALCK 417
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 103/273 (37%), Gaps = 50/273 (18%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA------------------- 350
+ P + + ++N F + + KSG +P+
Sbjct: 86 ISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKAL 145
Query: 351 ----------------TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
TYG + + ++G+ ++M KS + Y L+
Sbjct: 146 DFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGL 205
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
++G +++A+ + +RG++ A Y L C+ GRWQ+ ++ K+ + P
Sbjct: 206 CKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR-ENVDPD 264
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFE 513
+ TF LI + G I + + M E P+I T NA+++ Y + +A+ELF
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ L+PD Y+ +++
Sbjct: 325 RMVKRG-------------LEPDVLNYNVLIDG 344
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ K EA+ +F M NL PDIA+Y+S+ L +G + + +L++ M
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536
Query: 291 --------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ +P + ++ R+ + + PD +A+++ +
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNHAIVDNLCKGEKL 595
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
K K L G P+ TY + + + + G + KM + A+T++++
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVV 416
+ + + ++A M RG+V
Sbjct: 656 IGVLLQRNETDKAEKLREEMIARGLV 681
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 138/348 (39%), Gaps = 27/348 (7%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD ++ PD++ YN +++A +K + +L ++ P+ T
Sbjct: 184 KQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDT 243
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y L ++ SG + F +M K G A+ Y + + G +AV M+
Sbjct: 244 YALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK 303
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+ + + Y L + A+ V +++S + KP TFT L+ + G
Sbjct: 304 RDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRS-QKCKPNICTFTALVNAFAREGLC 362
Query: 472 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ IF+ +++ EP++ NA+++ YSR A E+F
Sbjct: 363 EKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC---------- 412
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+PD +Y+ M++A A E + V++ M G H LL SRAGK
Sbjct: 413 ---EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAK 469
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
E + + ++G P ML +EK ++ AM P+
Sbjct: 470 CEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPY 517
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 152/389 (39%), Gaps = 71/389 (18%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML- 255
+ GL G ++A+ + + +K R S YT L+ + GKA + + AL++F+ M
Sbjct: 283 IDGLMKGGDTQKAVEIFER---MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRS 339
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ C P+I + ++ + GL ++ ++ E++++ LEPD+
Sbjct: 340 QKCK--PNICTFTALVNAFAREGLCEKAEEIFEQLQEAG---------------LEPDVY 382
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNA++ A + G +F ++ G +P A+Y + ++ ++G ++ F M
Sbjct: 383 AYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVM 442
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G ++ +L+ A+ GK+ + V M + G+
Sbjct: 443 KRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGI-------------------- 482
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNA 494
KP ++ G + + M+ P +I T N
Sbjct: 483 ----------------KPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNI 526
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ +Y R F++ +ELF N L PD T++S + A + Q+
Sbjct: 527 LINIYGRAGFFARMEELFRSLPARN-------------LIPDVVTWTSRIGAYSRRKQYN 573
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
V++ M +GC D LL S
Sbjct: 574 RCLEVFEEMIDAGCYPDGGTAKVLLSACS 602
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 129/323 (39%), Gaps = 15/323 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P VVYNA ++ + + +F+++++ +PS ATY + + + ++ K + +
Sbjct: 274 PSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKV 333
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M T+ LV AF EG +A +++ G+ Y L
Sbjct: 334 FHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSR 393
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 490
G A + ++ + +P ++ ++ + G +D ++F+ MK P +
Sbjct: 394 AGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMK 452
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ +L YSR +K +E+ + ++ +KPD + +SML
Sbjct: 453 SHMLLLSAYSRAGKVAKCEEIVNQMHKSG-------------IKPDTFVLNSMLNLYGRL 499
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
Q+E E V M D + + L+ RAG +E F SL IP + +
Sbjct: 500 GQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTW 559
Query: 611 TEMLIQAIVQSNYEKAVALINAM 633
T + + Y + + + M
Sbjct: 560 TSRIGAYSRRKQYNRCLEVFEEM 582
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 38/252 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ +AG P+ A IF+LM + PD A+Y+ + G+ GL ++ + E
Sbjct: 382 YAYNALMEAYSRAGFPYGAAEIFSLM-QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 440
Query: 289 RMRQ------------------------KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
M++ K + + MH+ ++PD V N++LN
Sbjct: 441 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG----IKPDTFVLNSMLNLY 496
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
Q++ + V + K +TY + + + ++G + + E FR +
Sbjct: 497 GRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDV 556
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV---GTASVYYELACCLCNNG-RWQDAML 440
+T+ + A+ + N + M G GTA V C+NG + Q+
Sbjct: 557 VTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLS----ACSNGDQIQEVTT 612
Query: 441 VVEKI-KSLRHS 451
V+ + K +R S
Sbjct: 613 VIRTMHKDMRTS 624
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 130/318 (40%), Gaps = 21/318 (6%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN +L S + V+ + + +G P+ TYG + + Q+ +++ FR MA
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G + +Y +L+ K++EA + M G Y L LC G+ +
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 495
+A+ + ++ R P + + LI G + + +F+ M + C P + T N++
Sbjct: 140 EAVDLFSRM-VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
L +SR F + + LF++ R P+ +T++++L+
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCV-------------PNIFTFNNLLDGFCKMGDMVE 245
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
++ M GC D + L+ GK H + ++ +G P +++
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP------DIVS 299
Query: 616 QAIVQSNYEKAVALINAM 633
I+ Y K+ AL +A+
Sbjct: 300 YNILIDGYSKSGALDHAI 317
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 125/323 (38%), Gaps = 23/323 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLD-WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
LL GL G ++A+ + VY + VY L+ K G EA R+F M
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVY----RGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM 183
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
LE P + Y+S+ + G + L K+M R+ P++
Sbjct: 184 LEK-GCIPTVFTYNSLLSGFSRKGEFGRVQSLF-----------KDMLRQGC----VPNI 227
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+N +L+ +F ++R G P +Y M M GK R+
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLRE 287
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M +SG ++Y +L+ + + G ++ A+ + + G+ A Y + CLC G+
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
A +V + + + S P L+I G + + +FQ M K C P I N
Sbjct: 348 VGAAFVVFKDMIA-NGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406
Query: 494 AMLKVYSRNDMFSKAKELFEETT 516
++ + E+F E T
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHELT 429
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 149/391 (38%), Gaps = 69/391 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ L + +A SV G+ + + F Y+ L+A L + + EA + N M+
Sbjct: 58 LLRSLCQAQRFEEARSVFR---GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P++ Y S+ L ++G LKE V L RM + PD V
Sbjct: 115 -DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCP---------------PDGV 158
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN +++ + +F+++ + G P+ TY + + G++ V F+ M
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G T+ L+ F + G + EA M G Y L +C+ G+
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKP 278
Query: 436 QDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA 494
+A L+ E I+S P+I + N
Sbjct: 279 HEAQRLLREMIRS------------------------------------GVGPDIVSYNI 302
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ YS++ A +LF E ++ L+PD ++YS++++ A +
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSG-------------LEPDAFSYSTIIDCLCRAGKVG 349
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
V+K M +G D L++ R
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 114/290 (39%), Gaps = 18/290 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ Y +L + + +++ VF+ + G P+ +Y + + + + K D E
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M G +TY L+ + GK+ EAV M RG VY L
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
G +A + E++ + P T+ L+ G S+F+ M + C PNI
Sbjct: 170 KGDMGEAYRLFEEMLE-KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N +L + + +A LF E + G P PD +Y++++ +
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLE-----------MRSLGCP--PDVVSYNTLMRGMCSK 275
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+ + + + M SG D + L+ S++G L+HA E
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA---LDHAIKLFYE 322
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 19/298 (6%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D S++ + ++ M + G + T LL G KG + + S+ +
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK---DM 218
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + + F + LL K G EA R+F L + PD+ +Y+++ + G
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF-LEMRSLGCPPDVVSYNTLMRGMCSKGK 277
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E +L+ M + + PD+V YN +++ S +F +
Sbjct: 278 PHEAQRLLREMIRSG---------------VGPDIVSYNILIDGYSKSGALDHAIKLFYE 322
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ KSGL+P A +Y ++ + ++GK F+ M +G A A LV +
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
+ E+ + M + V Y L LC R D + ++ S +EI+
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEIS 440
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 15/219 (6%)
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+Y +EV+ +SG+ D V+ + M +G TY L+R+ + + EA + R M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+G Y L LC + +A ++ ++ H +P +T+ L+ G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLSGLCKMGK 137
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ + + +F M C P+ N ++ +S+ +A LFEE
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI-------- 189
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
P +TY+S+L + ++ + ++K M GC
Sbjct: 190 -----PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 56/126 (44%)
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
E+ ++ R + T+ GA P+ YTY +L + A ++E V++GMA GC
Sbjct: 25 EVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCS 84
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
+ ++ L+ R K + +++ G P+ + + +L ++AV L
Sbjct: 85 PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDL 144
Query: 630 INAMAY 635
+ M Y
Sbjct: 145 FSRMVY 150
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/506 (19%), Positives = 203/506 (40%), Gaps = 34/506 (6%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+ +L+ L++ + ++ + + M+ +GL + L+ L + R+ +S +
Sbjct: 93 SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMA-- 150
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
G+ + + YT L+ L R EA R+F + ++ +P++ Y ++ L +
Sbjct: 151 -GIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLF-IRMQKLGCWPNVVTYGTLIKGLCR 208
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G + +KL + M S N +P++ YN +++ +WK +
Sbjct: 209 TGNINLALKLHQEMLNGTSPYAIN---------CKPNIFSYNIIIDELCKIGKWKEAKRL 259
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F ++ G++P T+ ++ + + G +F M G T+ L+ F
Sbjct: 260 FNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCL 319
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-PLE 455
G ++ A +M +G Y L C ++AM + ++ LR K P
Sbjct: 320 VGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEM--LRVGKWPDM 377
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEE 514
TF L+ G + D +F +K H P N+ + L +N +A ELF E
Sbjct: 378 KTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNE 437
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
N +K D +++ +++ A + E +++ ++ G Q D
Sbjct: 438 LKSYN-------------MKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVT 484
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ ++ + G+ F + E G P+ L ++ +L + E+ V L++ M
Sbjct: 485 YCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMI 544
Query: 635 YAPFHITERQWTELFESNEDRISRDK 660
+ +T + ED +S+D+
Sbjct: 545 QKDVSLAASIYTIV----EDMVSKDE 566
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 141/337 (41%), Gaps = 61/337 (18%)
Query: 125 NWVLDDDVQLGSDYFAKNVEWHPEKRW---------RSEAEAIRVLVDRLSEREMTAKNW 175
N ++D+ ++G +W KR R + L+D L + M +
Sbjct: 241 NIIIDELCKIG--------KWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAK 292
Query: 176 KFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT 232
KF+ M G+ +FT +++ +GD S ++ + K YT
Sbjct: 293 KFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELF------LSMPSKGYEPDVISYT 346
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVKLIER 289
L+ K EA++++N ML +PD+ + + L G+VG K+L ++
Sbjct: 347 VLIYGYCKTFNVEEAMKLYNEMLR-VGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVV-- 403
Query: 290 MRQKPSKRIKNMH------------------------RKNWDPVLEPDLVVYNAVLNACV 325
KP KN++ K+++ ++ D+ +N +++
Sbjct: 404 ---KPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYN--MKLDIESFNCLIDGLC 458
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
+ + + + +F++L + GL+P TY + + ++G+ D + F+ M ++G L
Sbjct: 459 KARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLL 518
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
TY L+ F++ K+ E V + M Q+ V AS+Y
Sbjct: 519 TYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIY 555
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 116/293 (39%), Gaps = 21/293 (7%)
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
S ++ L + + + Y V ++KM +G + T +L+ ++ E ++A+
Sbjct: 90 SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ +RG + Y L LC R +A + +++ L P +T+ LI
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKL-GCWPNVVTYGTLIKGLCR 208
Query: 468 GGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 520
G+I+ + + Q M + +C+PNI + N ++ + + +AK LF E
Sbjct: 209 TGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQG- 267
Query: 521 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
++PD T+S++++ + + M L G D L+
Sbjct: 268 ------------VRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIE 315
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G + F S+ G P + +T ++ N E+A+ L N M
Sbjct: 316 GFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEM 368
>gi|298712109|emb|CBJ32990.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 650
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 147/360 (40%), Gaps = 38/360 (10%)
Query: 201 GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
G +G WR+ + +LD + +D L S + Y L+ + K+GR EAL + + ML + +
Sbjct: 34 GARGQWREVLRLLDKMA--EDGIPLNS-YAYNSALSSIAKSGRWREALALRDRMLSE-GV 89
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
D + ++ + G + + V+L+ M R D YNA
Sbjct: 90 RLDGYTFSALIEACSKGGNVAKGVELLREMVDAGVAR---------------DCFSYNAA 134
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
L+ V + K + + + G++P A TYG + SG++ L +M G
Sbjct: 135 LHGFVRNGDSKNALLMLEDMVADGVRPDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGI 194
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
A ++ L++A +EG+ AV + +ME G + N G+W++A+
Sbjct: 195 TPNAYSFSPLIKACGKEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALR 254
Query: 441 VVEKIKSLR---HSKPLEITFTGLIISSMD-GGHIDDCISIFQHMKDH--CEPNIGTVNA 494
+++K+++L P+ T I + G D +++ + MK + P+ T +
Sbjct: 255 LIDKLEALALGGEGVPMSTTMYNFGIDACARAGRWDQGVALLERMKSNPATPPDAQTYSY 314
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ +++ A E L P + Y S + A A QW+
Sbjct: 315 LIDACAKDANLEDALAYLTEMRAVG-------------LAPTFFAYISAMSAIKVAGQWK 361
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 124/307 (40%), Gaps = 24/307 (7%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + G+ L + G WR+A+++ D + + D + ++ L+ K
Sbjct: 49 MAEDGIPLNSYAYNSALSSIAKSGRWREALALRDRMLSEGVRLD---GYTFSALIEACSK 105
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G + + + M+ D + D +Y++ + G K + ++E M
Sbjct: 106 GGNVAKGVELLREMV-DAGVARDCFSYNAALHGFVRNGDSKNALLMLEDMVADG------ 158
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+ PD + Y +L C S +WK + ++R G+ P+A ++ ++
Sbjct: 159 ---------VRPDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGITPNAYSFSPLIKACG 209
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG--- 417
+ G++ L + M SG + + + A G+ EA+ + +E + G
Sbjct: 210 KEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKLEALALGGEGV 269
Query: 418 -TASVYYELACCLC-NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
++ Y C GRW + ++E++KS + P T++ LI + +++D +
Sbjct: 270 PMSTTMYNFGIDACARAGRWDQGVALLERMKSNPATPPDAQTYSYLIDACAKDANLEDAL 329
Query: 476 SIFQHMK 482
+ M+
Sbjct: 330 AYLTEMR 336
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 150/372 (40%), Gaps = 28/372 (7%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
++ S A G G +E+++L+++M + + + YN+ L++
Sbjct: 25 SFISTAKVRGARGQWREVLRLLDKMAEDG---------------IPLNSYAYNSALSSIA 69
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
S +W+ + ++ G++ T+ +E + G E R+M +G A
Sbjct: 70 KSGRWREALALRDRMLSEGVRLDGYTFSALIEACSKGGNVAKGVELLREMVDAGVARDCF 129
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
+Y + F G A+ + +M GV A Y L C N+G W+ M +++++
Sbjct: 130 SYNAALHGFVRNGDSKNALLMLEDMVADGVRPDAITYGTLLACCGNSGEWKLCMSLMDRM 189
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMF 505
+S P +F+ LI + G + + M + P N ++ + +
Sbjct: 190 RS-EGITPNAYSFSPLIKACGKEGRWALAVKTLEDM-EASGPTPNEHNWLMAIGA----C 243
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
A + E + L G+G P+ Y + ++A A A +W+ + + M
Sbjct: 244 GNAGQWEEALRLIDKLEALALGGEGVPMSTTMYNFG--IDACARAGRWDQGVALLERMKS 301
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP-HPLFFTEM-LIQAI-VQSN 622
+ + L++A K LE A L E + P FF + + AI V
Sbjct: 302 NPATPPDAQTYSYLIDA--CAKDANLEDALAYLTEMRAVGLAPTFFAYISAMSAIKVAGQ 359
Query: 623 YEKAVALINAMA 634
+++A++L++ MA
Sbjct: 360 WKEALSLLDEMA 371
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 148/400 (37%), Gaps = 75/400 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN--- 252
L+K G +G W A+ L+ ++ + + + G AG+ EALR+ +
Sbjct: 204 LIKACGKEGRWALAVKTLE---DMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKLE 260
Query: 253 -LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
L L + Y+ + G + V L+ERM+ P+
Sbjct: 261 ALALGGEGVPMSTTMYNFGIDACARAGRWDQGVALLERMKSNPAT--------------P 306
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD Y+ +++AC + ++R GL P+ Y AM + +G++
Sbjct: 307 PDAQTYSYLIDACAKDANLEDALAYLTEMRAVGLAPTFFAYISAMSAIKVAGQWKEALSL 366
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEA----------VAA--------------- 406
+MAK ++ +V A+ ++G++ +AA
Sbjct: 367 LDEMAKGRLISDVFSFYNVVDAYGKDGQLARTLVQTSANPTEIAADSENEMRSDADLNAW 426
Query: 407 --------VRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
V+ ME GV + S + C W A L+ K+KSL +P ++
Sbjct: 427 RAEDPDELVKRMENNGVELDVMSFNILIDACARGGSHWAAARLLT-KMKSL-GLRPNSLS 484
Query: 458 FTGLIISSMDGGHIDD---CISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
+ II S GG ++ + + M K P++ + N + ++ + ++ LF
Sbjct: 485 YN-PIIHSCRGGTDEEWRLALDLLDEMRKSGLTPDVISFNTAITSCAKAGDWRRSLNLFA 543
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
G T PD +Y++++ A A QW
Sbjct: 544 GM---KVEGVT----------PDILSYNAVISACAKGGQW 570
Score = 39.3 bits (90), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 47/259 (18%), Positives = 107/259 (41%), Gaps = 31/259 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-LLKELVKLI 287
F Y ++ + AG+ EAL + + M + L D+ ++++V G+ G L + LV+
Sbjct: 345 FAYISAMSAIKVAGQWKEALSLLDEMAKG-RLISDVFSFYNVVDAYGKDGQLARTLVQTS 403
Query: 288 -----------ERMR----------QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
MR + P + +K M +E D++ +N +++AC
Sbjct: 404 ANPTEIAADSENEMRSDADLNAWRAEDPDELVKRMENNG----VELDVMSFNILIDACAR 459
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG---KYDLVHEFFRKMAKSGEAIG 383
+ +++ GL+P++ +Y + + G ++ L + +M KSG
Sbjct: 460 GGSHWAAARLLTKMKSLGLRPNSLSYNPIIHS-CRGGTDEEWRLALDLLDEMRKSGLTPD 518
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+++ + + + G ++ M+ GV Y + G+W+ + ++
Sbjct: 519 VISFNTAITSCAKAGDWRRSLNLFAGMKVEGVTPDILSYNAVISACAKGGQWRIGLELLA 578
Query: 444 KIKSLRHSKPLEITFTGLI 462
K+++ + + T+T I
Sbjct: 579 KVRADPTLEANQRTYTSAI 597
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 152/358 (42%), Gaps = 31/358 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ +L G +F+ ++ L + + +S+ + G +G+++E++ + RM
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFS-KFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRM 205
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EP L YN ++N V S + VF+ + + P
Sbjct: 206 KENG---------------IEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVV 250
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ + GK E + M A +TY L++A + EG + + M
Sbjct: 251 TYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEM 310
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+++G+ VY + LC +G+ + V E + S + K +T LI S+ G+
Sbjct: 311 DEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMIS-KGCKANVAIYTALIDSNAKCGN 369
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ + + +F+ M K+ EP+ T ++ ++ +A E E F SG
Sbjct: 370 MGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYME-----------FCSGK 418
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
G + + YSS+++ + + + E ++ M GC D + L+ ++ GK
Sbjct: 419 GVAV--NAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGK 474
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 67/134 (50%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
++ +Y A++++ +FK+++K GL+P TYG+ + + +SG+ D E+
Sbjct: 353 NVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYM 412
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+ G A+ A+ Y L+ + G+++EA M ++G + Y L L
Sbjct: 413 EFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKC 472
Query: 433 GRWQDAMLVVEKIK 446
G+ +A+ + ++++
Sbjct: 473 GKIDEALALSKRME 486
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 53/255 (20%)
Query: 230 VYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
VY+ ++ L K G+ E +F N++ + C ++A Y ++ + + G + E + L +
Sbjct: 321 VYSLVIGGLCKDGKRVEGYTVFENMISKGCK--ANVAIYTALIDSNAKCGNMGEAMLLFK 378
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RM+++ LEPD V Y ++N+ S + + G+ +
Sbjct: 379 RMKKEG---------------LEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVN 423
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A Y ++ + +SG+ D F +M K G + Y L+ A + GKI+EA+A +
Sbjct: 424 AMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSK 483
Query: 409 NME-----------------------------------QRGVVGTASVYYELACCLCNNG 433
ME +G+ TA+ + L+ LC +G
Sbjct: 484 RMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSG 543
Query: 434 RWQDAMLVVEKIKSL 448
+ A +++++ +
Sbjct: 544 KVARACKILDEMAPM 558
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/413 (19%), Positives = 166/413 (40%), Gaps = 38/413 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLD--WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ G G ++A+ ++D + GLK +R+ Y ++ +L K G+ EA ++
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLK-----PNRYTYNSIILLLCKIGKSFEAEKVLRE 353
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M+ + PD Y ++ ++G ++ K + M K + PD
Sbjct: 354 MMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK---------------ISPD 397
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ Y ++ + +F ++ GLKP TY ++V ++G+
Sbjct: 398 YITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHN 457
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M + G +TY L+ + G+++ A + M ++G+ +Y + +C G
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAG 517
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
+ A+ ++++++ + P IT+T +I + G ID + Q M D +P + T
Sbjct: 518 NIEQAIKLMKEME-VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTF 576
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N ++ + M L G+ G + PD TY+++++ +
Sbjct: 577 NVLMNGFCMLGMLEDGDRLL---------GWMLEKG----IVPDAITYNTLMKQHCIRNS 623
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+YK M G D + L+ +A + ++E G +P
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 140/320 (43%), Gaps = 21/320 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G G + ++ + K D YT L+ + KAG A + N M+
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPD---EVTYTTLIDVYCKAGEMVNAFSLHNEMV 460
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P+I Y ++ L + G L +L++ MR+K L+ ++
Sbjct: 461 Q-MGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG---------------LQLNVC 504
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+YN+++N + + + K++ +G+ P A TY ++ + G D H+ ++M
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +T+ VL+ F G + + + M ++G+V A Y L C
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNA 494
+ +++++ + P T+ LI ++ + +++ M + P + + NA
Sbjct: 625 NTTTKIYKRMRN-QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683
Query: 495 MLKVYSRNDMFSKAKELFEE 514
++K + + F +A+ELFEE
Sbjct: 684 LIKRFYKKRKFXEARELFEE 703
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 136/353 (38%), Gaps = 30/353 (8%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
+ +Y+ + +L ++G +KE +L+ +M + S PD+V Y+ V++
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST---------------PDVVSYSTVID 301
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+ K + ++ GLKP+ TY + ++ + GK + R+M
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ Y L+ F++ G + A M + + Y L G+ + +
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
++ S R KP E+T+T LI G + + S+ M + PNI T A++ +
Sbjct: 422 HEMIS-RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+ A EL +E + L+ + Y+SM+ A E + K
Sbjct: 481 HGELDTANELLDEMRKKG-------------LQLNVCIYNSMVNGICKAGNIEQAIKLMK 527
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
M ++G D + ++ R G +L+ G P + F ++
Sbjct: 528 EMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 133/324 (41%), Gaps = 27/324 (8%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K W P++ PD++VYN +++A +K V + +L +S P+ T
Sbjct: 133 KKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDT 192
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y L ++ +SG + F +M K G + A+ Y + + G +AV M+
Sbjct: 193 YALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMK 252
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+ G T Y L + A + +++++ R KP TFT L+ + G
Sbjct: 253 RDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQR-CKPNICTFTALVNALAREGLC 311
Query: 472 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ IF+ M++ EP++ NA+++ YSR A E+F + + G
Sbjct: 312 EKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIF-----------SLMQHMG 360
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+PD +Y+ M++A A E + V++ M G H LL S AG
Sbjct: 361 C--EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAK 418
Query: 591 LEHAFDSLLEAGEIPHPLFFTEML 614
E + ++G P ML
Sbjct: 419 CEDIIGQMHKSGLKPDTFVMNSML 442
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 139/339 (41%), Gaps = 39/339 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT L+ + GK + H A IF+ M + C P+I + ++ L + GL ++ ++ E
Sbjct: 262 TYTMLINVYGKESKSHMAQNIFDEMRTQRCK--PNICTFTALVNALAREGLCEKAEEIFE 319
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M++ EPD+ YNA++ + + G +F ++ G +P
Sbjct: 320 QMQEAG---------------YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPD 364
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A+Y + ++ ++G ++ F +M + G ++ +L+ A+ G + + +
Sbjct: 365 RASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIG 424
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI---TFTGLIISS 465
M + G+ V + G++ +E + S P T+ LI
Sbjct: 425 QMHKSGLKPDTFVMNSMLNLYGRLGQFGK----MEDLFSTMQKGPCRADISTYNILINVY 480
Query: 466 MDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G ++ +FQ + + EP++ T + + YSR ++ + ELFE+ A
Sbjct: 481 GRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCY--- 537
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
PD T +L A ++ Q E V + M
Sbjct: 538 ----------PDGGTAKVLLSACSSEEQIEQVTNVVRTM 566
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ +AG P+ A IF+LM + PD A+Y+ + G+ GL ++ + E
Sbjct: 331 YAYNALMESYSRAGFPYGAAEIFSLM-QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 389
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M KRI + P + + +L+A + + Q+ KSGLKP
Sbjct: 390 EM-----KRIG----------ITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPD 434
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ + + G++ + + F M K TY +L+ + G +
Sbjct: 435 TFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFV 486
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 83/221 (37%), Gaps = 14/221 (6%)
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIG 490
N +W +L+ E I + +P I + L+ + D S + + ++ HC P
Sbjct: 132 NKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTED 191
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T +LK Y ++ + KA+ +F E + L P Y++ ++
Sbjct: 192 TYALLLKAYCKSGLLEKAEAVFAEMRKYG-------------LSPSAIVYNAYIDGLVKG 238
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
++ M GCQ + L+ + K H+ ++ FD + P+ F
Sbjct: 239 GNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTF 298
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
T ++ + EKA + M A + + L ES
Sbjct: 299 TALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMES 339
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 167/402 (41%), Gaps = 32/402 (7%)
Query: 215 WVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+VY K ++KS V + ++ IL + G+ +A + F +E + P++ Y++V
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKA-KDFIGHMEVYGVKPNVVTYNTVING 261
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
G + SK K M KN L+PD YN+ ++ + +
Sbjct: 262 YCLRGKF-----------EAASKIFKTMKDKN----LKPDCYTYNSFISRLCKERRIEEA 306
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
V +L +SGL P+A TY ++ G D + +M G TY +L+ A
Sbjct: 307 SGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHA 366
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ E +I EA ++ M ++GV Y C G + A+ + +++ ++ +P
Sbjct: 367 LFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVE-KNIRP 425
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
T+T LI + + F+ +K+ P+I NA++ + N +A +L
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
+E D A + PDE T++++++ + E + + M G + D
Sbjct: 486 KEM-------------DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDH 532
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ L+ S+ G FD +L G P L + ++
Sbjct: 533 ISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 131/355 (36%), Gaps = 63/355 (17%)
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
K ++V++++ K +K S T+ + + ++ + GK+ +F M G +TY +
Sbjct: 199 KMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTV 258
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ + GK A + M+ + + Y LC R ++A V+ K+
Sbjct: 259 INGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLE-SG 317
Query: 451 SKPLEITFTGLIISSMDGGHIDDCI-------------SIFQH----------------- 480
P +T+ LI + G +D S+F +
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377
Query: 481 -----MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
M++ EP++ T N + Y R KA LF+E N ++
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN-------------IR 424
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC--HLLE 592
P TY+S+++ ++ E +K G D ++ A G C ++
Sbjct: 425 PTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPD-----IIMFNALIDGHCVNGNID 479
Query: 593 HAFDSLLE---AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHIT 641
AF L E A +P + F ++ + E+A L++ M P HI+
Sbjct: 480 RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHIS 534
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 18/270 (6%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
+A + EA+ FN+M E + P++AA++S+ L + +++ ++ E+M + S
Sbjct: 147 ARAQKVDEAVYTFNVM-EKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGRFS--- 202
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
PD Y+ +L + + V+ + +G +P TYG+ ++
Sbjct: 203 -------------PDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDS 249
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ ++G+ + + M G Y VLV + E +I +AVA +M++ G+V
Sbjct: 250 LCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPD 309
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
VY L C ++ +A V++ ++ P T+ ++ + G D+ +F
Sbjct: 310 VVVYNALVTAFCKVKKFDNAFRVMDDMEG-HGITPNSRTWNIILNKLISLGKDDEAYRVF 368
Query: 479 QHMKDHCEPNIGTVNAMLKVYSRNDMFSKA 508
+ M C+P+ T M+K++ ND A
Sbjct: 369 RRMIKRCQPDSDTYTMMIKMFCENDRLEMA 398
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 136/323 (42%), Gaps = 59/323 (18%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+M + G++ LL L + R+A + + + G + D K+ Y+ LL G
Sbjct: 161 VMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNG-RFSPDAKT---YSILLEGWG 216
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK 296
+A + ++++ ML D PDI Y + +L + G ++E V +++ M + P+
Sbjct: 217 RAPNLPKMRKVYSDML-DAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTT 275
Query: 297 RIKNMHRKNW-------DPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
I ++ + D V + PD+VVYNA++ A ++ F V
Sbjct: 276 FIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDD 335
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG---------------- 383
+ G+ P++ T+ + + ++ GK D + FR+M K +
Sbjct: 336 MEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMIKMFCENDRL 395
Query: 384 --AL----------------TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
AL T+ VL+ ++G++++A + +M ++G+ S + +L
Sbjct: 396 EMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKL 455
Query: 426 ACCLCNNGRWQDAMLVVEKIKSL 448
L GR +V+K+K L
Sbjct: 456 RQLLLKEGRKDVLEFLVDKMKIL 478
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/367 (19%), Positives = 138/367 (37%), Gaps = 57/367 (15%)
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV--VYNAVLNACVPSHQWKGVFWVFK 338
K L KLI RQ I+ H D + PD+ V + NA + ++++ W K
Sbjct: 37 KRLCKLIISCRQASGLEIELDHS---DLRVTPDVAERVLERLDNAGMLAYRF--FEWARK 91
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
Q R G + ++ + + + +Y L+ + M + G + T+ +++R +
Sbjct: 92 QRRGGGCAHTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQG-VVNVETFGIIMRKYARAQ 150
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
K++EAV ME+ GVV + + L C LC K K++R ++
Sbjct: 151 KVDEAVYTFNVMEKYGVVPNLAAFNSLLCALC-------------KSKNVRKAQ------ 191
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
IF+ M P+ T + +L+ + R K ++++ + A
Sbjct: 192 -----------------EIFEQMNGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDA 234
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
+PD TY M+++ + E +V + M GCQ ++ L
Sbjct: 235 GC-------------QPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVL 281
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
+ + F + + G +P + + ++ ++ A +++ M
Sbjct: 282 VHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGI 341
Query: 639 HITERQW 645
R W
Sbjct: 342 TPNSRTW 348
>gi|194690470|gb|ACF79319.1| unknown [Zea mays]
Length = 671
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 172/417 (41%), Gaps = 57/417 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L++ G+A P EA+++F +M P+I + A++ V L ++ R R+
Sbjct: 102 LISAYGRAAIPQEAVKLFRMM-------PNIGVPRT-ALSYNAV-----LKAILCRGREA 148
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
++RI N + + PD+ YN ++ + + VF ++ G+ P TY
Sbjct: 149 MARRIYNAMIADG---VAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVTTYN 205
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +++G + + F +MA G +++Y V+++ + E ++ EAVA M ++
Sbjct: 206 TLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEK 265
Query: 414 GVVGTASVYYELACCLCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
G+ + + L LC++ GR +A V+ + R + + F L+ + G +D
Sbjct: 266 GLRLSEKTFAALMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLD 325
Query: 473 DCISI------FQHM----------------KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
+ + F+H+ CE I ++ +++ + + S
Sbjct: 326 GALEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGKCETAIEVLDELME---KGTLLSPKSP 382
Query: 511 LFEETTRANSSGYTFLSGDGAPLKP-------------DEYTYSSMLEASATAHQWEYFE 557
+ E + A + FL +G+ K D+ ++S++ A E +
Sbjct: 383 VLEAS--AYNPVIEFLCSNGSTAKAETFFRQLMKKGVDDKAAFNSLIRGHAKEGVPEAAQ 440
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ M D HA L+ + + + A DS+++ G +P P F ++
Sbjct: 441 EILAIMTRREVPTDPESHALLVDSFLKKNEPADAKTALDSMMQQGHLPSPALFKSVM 497
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 119/296 (40%), Gaps = 25/296 (8%)
Query: 290 MRQKP-SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK-QLRKSGLKP 347
+R++P + R++N R P L+ LV + V++ + + F+ R+ G P
Sbjct: 2 IRRRPWTTRLENSIRL-LSPTLDAPLV--HGVISGAASAGRADLALQFFRFAYRRGGFSP 58
Query: 348 SAATYGLAMEVMLQSGKYDLVHE---FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
AT+ L + + + + L H M A T L+ A+ EAV
Sbjct: 59 EGATFALLVPAL--ASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAV 116
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
R M GV TA Y + + GR A + + + P T+ LI
Sbjct: 117 KLFRMMPNIGVPRTALSYNAVLKAILCRGREAMARRIYNAMIA-DGVAPDVSTYNTLIWG 175
Query: 465 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
++ + +F MK H P++ T N +L + R A+++F+E
Sbjct: 176 FGLCKKMETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDE--------- 226
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++G+G + + +Y+ M++ ++ E ++ MA G +L + A L+
Sbjct: 227 --MAGEGT--ERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALM 278
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 25/216 (11%)
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIG------TVN 493
LV++ + S + P E T LI + + + +F+ M PNIG + N
Sbjct: 82 LVLDTMPSFSVA-PDEPTLAALISAYGRAAIPQEAVKLFRMM-----PNIGVPRTALSYN 135
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A+LK + + +E Y + DG + PD TY++++ +
Sbjct: 136 AVLKA-----ILCRGREAMARRI------YNAMIADG--VAPDVSTYNTLIWGFGLCKKM 182
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
E V+ M G D T + LL RAG FD + G + + + M
Sbjct: 183 ETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVM 242
Query: 614 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
+ + + E+AVAL MA ++E+ + L
Sbjct: 243 IKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALM 278
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/413 (19%), Positives = 166/413 (40%), Gaps = 38/413 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLD--WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ G G ++A+ ++D + GLK +R+ Y ++ +L K G+ EA ++
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLK-----PNRYTYNSIILLLCKIGKSFEAEKVLRE 353
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M+ + PD Y ++ ++G ++ K + M K + PD
Sbjct: 354 MMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK---------------ISPD 397
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ Y ++ + +F ++ GLKP TY ++V ++G+
Sbjct: 398 YITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHN 457
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M + G +TY L+ + G+++ A + M ++G+ +Y + +C G
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAG 517
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
+ A+ ++++++ + P IT+T +I + G ID + Q M D +P + T
Sbjct: 518 NIEQAIKLMKEME-VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTF 576
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N ++ + M L G+ G + PD TY+++++ +
Sbjct: 577 NVLMNGFCMLGMLEDGDRLL---------GWMLEKG----IVPDAITYNTLMKQHCIRNS 623
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+YK M G D + L+ +A + ++E G +P
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 139/320 (43%), Gaps = 21/320 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G G + ++ + K D YT L+ + KAG A + N M+
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPD---EVTYTTLIDVYCKAGEMVNAFSLHNEMV 460
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P+I Y ++ L + G L +L++ MR+K L+ ++
Sbjct: 461 Q-MGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG---------------LQLNVC 504
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+YN+++N + + + K++ +G+ P A TY ++ + G D H+ ++M
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +T+ VL+ F G + + + M ++G+V A Y L C
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNA 494
+ +++++ + P T+ LI ++ + +++ M + P + + NA
Sbjct: 625 NTTTKIYKRMRN-QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683
Query: 495 MLKVYSRNDMFSKAKELFEE 514
++K + + +A+ELFEE
Sbjct: 684 LIKRFYKKKKILEARELFEE 703
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 136/353 (38%), Gaps = 30/353 (8%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
+ +Y+ + +L ++G +KE +L+ +M + S PD+V Y+ V++
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST---------------PDVVSYSTVID 301
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+ K + ++ GLKP+ TY + ++ + GK + R+M
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ Y L+ F++ G + A M + + Y L G+ + +
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
++ S R KP E+T+T LI G + + S+ M + PNI T A++ +
Sbjct: 422 HEMIS-RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+ A EL +E + L+ + Y+SM+ A E + K
Sbjct: 481 HGELDTANELLDEMRKKG-------------LQLNVCIYNSMVNGICKAGNIEQAIKLMK 527
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
M ++G D + ++ R G +L+ G P + F ++
Sbjct: 528 EMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 187/447 (41%), Gaps = 71/447 (15%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P + +YN +L+A + ++++ + ++ ++K GL P+ TY + ++ + ++ + D H+
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHK 200
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F +M+ G A+TY +V + + GKI++A R + R + VY L +C
Sbjct: 201 LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELAGR-FKPSVPVYNALIDGMC 255
Query: 431 NNGRWQDAMLVVEK----------------IKSLRHSKPLEI------------------ 456
GR + A+ ++ + I SL S +E+
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
TFT LI G + + + +++ M +D CEPN+ N ++ N +A ++ ++
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375
Query: 516 TRA----NSSGYTFL------SGD--GAP----------LKPDEYTYSSMLEASATAHQW 553
R+ N + Y+ L SGD GA +P+ TY+ M++ +
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
+ + + M L GC + + G+ + + G +P+ + E+
Sbjct: 436 DQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNEL 495
Query: 614 LIQAIVQSNYEKAVAL---INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 670
L + YE+A L I A P +T T L+ + + + L+ AL
Sbjct: 496 LDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN--TVLYGFSRAGMMGEALQLFGKALVR 553
Query: 671 CNAASSEITVSNLSRALHALCRSEKER 697
A S IT + + +HA C+ K +
Sbjct: 554 GTAPDS-ITYNTM---IHAYCKQGKVK 576
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/315 (18%), Positives = 138/315 (43%), Gaps = 30/315 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ G+ +EAL ++ LM++D P++ AY+++ L G L+E +++ ++M
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ P++ Y+ +++ S G + ++ G +P+
Sbjct: 376 QRSGCL---------------PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++V+ ++ +D + KM G +T+ ++ G++ A+ + M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ G + + Y EL L ++++A + ++I++ R+ +P +T+ ++ G
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA-RNLQPNLVTYNTVLYGFSRAGM 539
Query: 471 IDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ + + +F + + P+ T N M+ Y + A +L E +
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE--------- 590
Query: 530 GAPLKPDEYTYSSML 544
PD TY+S++
Sbjct: 591 ---WHPDIITYTSLI 602
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/305 (19%), Positives = 127/305 (41%), Gaps = 20/305 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL GS +A+ V D ++ L + Y+ L+ K+G A +N M+
Sbjct: 355 LIHGLCSNGSLEEALQVCDQ---MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P++ Y + L + + + L+E+M + P+ +
Sbjct: 412 SH-GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCT---------------PNTI 455
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N + + + + + ++++ G P+ TY ++ + + KY+ F+++
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+TY ++ F G + EA+ RG + Y + C G+
Sbjct: 516 EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNA 494
+ A +VE++ S++ P IT+T LI + + +I++ ++ + + PN T NA
Sbjct: 576 KIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNA 635
Query: 495 MLKVY 499
+++ +
Sbjct: 636 LVRCF 640
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 117/302 (38%), Gaps = 20/302 (6%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
V ++ +Q++ G+ + + + G + + F ++ + G Y L+
Sbjct: 93 VQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLD 152
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHS 451
A E K NM++ G++ Y L LC N R A L VE S +
Sbjct: 153 ALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVE--MSNKGC 210
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P +T+T ++ S G IDD + + +P++ NA++ + A +L
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDDA----RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKL 266
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
E + +G + P+ +YS ++ + + E ++ M L GC +
Sbjct: 267 LGE-----------MMDNG--VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDAN 313
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
L+ GK + + +++ G P+ + + ++ + E+A+ + +
Sbjct: 314 IHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCD 373
Query: 632 AM 633
M
Sbjct: 374 QM 375
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 53/335 (15%)
Query: 123 DLNWVLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIM 181
+ N +++ QLG FA +V K + L+ L + + F +
Sbjct: 124 NCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKL 183
Query: 182 NQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG----------------------L 219
G F + L+ GL G R A+ +L V G +
Sbjct: 184 VALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHV 243
Query: 220 KDKRDLKSRFV----------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
D DL S V Y+ L++ G+ +A+ +FN M+ + N+ PD+ ++
Sbjct: 244 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISE-NIKPDVYTFNI 302
Query: 270 VAVTLGQVGLLKELVKLIERM--RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ + G + +KL++ M R +P P++V Y+++L+A +
Sbjct: 303 LVDVFCKSGKISYALKLVDEMHDRGQP-----------------PNIVTYSSILDALCKT 345
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
H+ + +L+ G++P+ TY + ++ + SGK + F + G I +TY
Sbjct: 346 HRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTY 405
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
V+ F ++G +EA A + ME+ G + A Y
Sbjct: 406 IVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTY 440
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 20/286 (6%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ L G+ H+AL F+ L + +Y ++ L +VG + + L+ R+
Sbjct: 160 FTTLIKGLCLKGQIHQALN-FHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRV 218
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K +++P++V+Y+ +++ F ++ ++ G+ P+
Sbjct: 219 DGK---------------LVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 263
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + GK + F KM T+ +LV F + GKI+ A+ V M
Sbjct: 264 TYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEM 323
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
RG Y + LC R A+ ++ K+K + +P T+T LI G
Sbjct: 324 HDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKD-QGIRPNMHTYTILIDGLCTSGK 382
Query: 471 IDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
++D +IF+ + K + + + T M + + +F +A L +
Sbjct: 383 LEDARNIFEDLLVKGY-DITVVTYIVMFYGFCKKGLFDEASALLSK 427
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/300 (17%), Positives = 123/300 (41%), Gaps = 24/300 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P+LV N ++N F VF ++ K G P+ T+ ++ + G+
Sbjct: 118 IKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQAL 177
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F K+ G ++Y L+ + G+ A+ +R ++ + V +Y + +
Sbjct: 178 NFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGM 237
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C + DA + ++ S + P +T++ LI G + D + +F M ++ +P+
Sbjct: 238 CKDKHVNDAFDLYSEMVS-KGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPD 296
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEE----------------------TTRANSSGYTFL 526
+ T N ++ V+ ++ S A +L +E T R + +
Sbjct: 297 VYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLT 356
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
++P+ +TY+ +++ T+ + E +++ + + G + + + + G
Sbjct: 357 KLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKG 416
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 31/308 (10%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ + D + ++ K+ L + ++ +A + EA+ FN+M E +L P++ A
Sbjct: 112 RQYKLMWDLINAMRKKKMLNVE-TFCIVMRKYARAQKVDEAIYAFNVM-EKYDLPPNLVA 169
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
++ + L + +++ ++ E MR + PD Y+ +L
Sbjct: 170 FNGLLSALCKSKNVRKAQEVFENMRDR----------------FTPDSKTYSILLEGWGK 213
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
VF+++ +G P TY + ++++ ++G+ D R M S
Sbjct: 214 EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFI 273
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y VLV + E ++ EAV ME+ G+ +V+ L C R ++ V++++K
Sbjct: 274 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 333
Query: 447 S---LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRND 503
S +SK I LI + G D+ +F+ M CEP+ T ++K
Sbjct: 334 SKGVTPNSKSCNIILRHLI----ERGEKDEAFDVFRKMIKVCEPDADTYTMVIK------ 383
Query: 504 MFSKAKEL 511
MF + KE+
Sbjct: 384 MFCEKKEM 391
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 17/189 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F+Y+ L+ G R EA+ F L +E + D+A ++S+ + +K + ++
Sbjct: 270 TTFIYSVLVHTYGTENRLEEAVDTF-LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 328
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++ M+ K + P+ N +L + + F VF+++ K +
Sbjct: 329 LKEMKSKG---------------VTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CE 372
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P A TY + +++ + + + + ++ M K G T+ VL+ EE +A
Sbjct: 373 PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVL 432
Query: 407 VRNMEQRGV 415
+ M + G+
Sbjct: 433 LEEMIEMGI 441
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 134/322 (41%), Gaps = 31/322 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT ++ +AG +ALR+ + M+ C PD+ Y+++ L + L + L+
Sbjct: 18 IYTMVIGGFCRAGLMSDALRVRDEMV-GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 76
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR++ + PDL + +++ + +F + L+P
Sbjct: 77 MRERG---------------VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 121
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY ++ M + G D ++ + M +TY +L+ + E+G++ +A +
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 181
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M +G++ Y + C +G ++K+ + S L IT+ LI +
Sbjct: 182 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL-ITYNTLIHGYIKED 240
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ D + M K+ +P++ T N ++ +S + +A +FE+
Sbjct: 241 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG--------- 291
Query: 529 DGAPLKPDEYTYSSMLEASATA 550
++PD YTY SM+ TA
Sbjct: 292 ----IEPDRYTYMSMINGHVTA 309
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 122/332 (36%), Gaps = 18/332 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD V+Y V+ + V ++ G P TY + + + +
Sbjct: 12 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 71
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M + G T+ L+ + EGK+++A+ M + + Y L +
Sbjct: 72 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 131
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C G A + + + S R P +T++ LI S + G ++D M + PN
Sbjct: 132 CRQGDLDKANDLWDDMHS-REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I T N+++K Y R+ SK ++ ++ S PD TY++++
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS-------------PDLITYNTLIHGYI 237
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + M Q D + L+ S G F+ + G P
Sbjct: 238 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 297
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM---AYAP 637
+ M+ + N ++A L + M +AP
Sbjct: 298 TYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 329
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 17/241 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+T L+ G+ +AL++F+ ML L PDI Y+++ + + G L
Sbjct: 88 TFTTLIHGYCIEGKLDKALQLFDTMLNQ-RLRPDIVTYNTLIDGMCRQGDL--------- 137
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
K + +MH + + P+ V Y+ ++++ Q + F ++ G+ P+
Sbjct: 138 --DKANDLWDDMHSRE----IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 191
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY ++ +SG +F +KM + + +TY L+ + +E K+++A +
Sbjct: 192 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 251
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME+ V Y L +G Q+A + EK+ + + +P T+ +I + G
Sbjct: 252 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA-KGIEPDRYTYMSMINGHVTAG 310
Query: 470 H 470
+
Sbjct: 311 N 311
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 83/219 (37%), Gaps = 19/219 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G+ +G +A + D + + + Y+ L+ + G+ +A + M+
Sbjct: 127 LIDGMCRQGDLDKANDLWD---DMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+I Y+S+ + G + + K +++M M K + PDL+
Sbjct: 184 NK-GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM----------MVNK-----VSPDLI 227
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +++ + + F + + K ++P TY + + G F KM
Sbjct: 228 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 287
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
G TY ++ G EA M QRG
Sbjct: 288 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 326
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 160/412 (38%), Gaps = 36/412 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + +LA L + RI+ LM ++ PD+ Y + L + G + + +++++
Sbjct: 137 FAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLD 196
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS--GLK 346
M R++ D + PD+V N V++ S + + +Q S G
Sbjct: 197 -----------GMSRQDLD--IRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCP 243
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ + G + +E KM G +T +V G+ A+
Sbjct: 244 PNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEF 303
Query: 407 VRNMEQRGV----VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
R E+R V G A Y L L + AM + + S HS P I + +I
Sbjct: 304 FR--EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHS-PDAIMYFTMI 360
Query: 463 ISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G ++D S+ MK+ + + N ++ + R +A EL +E
Sbjct: 361 SGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG-- 418
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
++PD TY+++L S A + + + M GCQ L+
Sbjct: 419 -----------IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ GK S+ E+G P+ + + ++ + + + A+ L + M
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 98/254 (38%), Gaps = 52/254 (20%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD Y ++ L Q G L++ + M++ K D YN ++
Sbjct: 351 PDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL---------------DTKAYNILI 395
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + + +++++ G++P TY + ++G + V E KM G
Sbjct: 396 AGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ 455
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+T+ LV + + GKI+EA+ +R+M++ G+ +Y L LC
Sbjct: 456 PSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR--------- 506
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYS 500
G +D I +F MK+ P N+ T NA+LK
Sbjct: 507 ---------------------------GDVDLAIELFDEMKEKSVPANVTTFNALLKGLR 539
Query: 501 RNDMFSKAKELFEE 514
+M KA EL ++
Sbjct: 540 DKNMPEKAFELMDQ 553
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/473 (19%), Positives = 186/473 (39%), Gaps = 70/473 (14%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+ +++DRL + + + MN E L+ GLG +G A + +
Sbjct: 444 TVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQ- 502
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE--------------DC---- 258
+ D + + VYT L+ K GR + +IF M+ DC
Sbjct: 503 --MLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKA 560
Query: 259 ----------------NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
PD+ +Y + L + G +E +L M+++
Sbjct: 561 GETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGC------- 613
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
VL D YN ++ S + + + ++++ G +P+ TYG ++ + +
Sbjct: 614 ------VL--DTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKI 665
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+ D + F + +G + + Y L+ F + G+I+EA + + Q+G+ +
Sbjct: 666 DRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 725
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 481
L L +A++ + +K+L+ + P IT++ LI + +Q M
Sbjct: 726 NCLLDALVKAEEINEALVCFQNMKNLKGT-PNHITYSILINGLCRVRKFNKAFVFWQEMQ 784
Query: 482 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
K +PN T M+ ++ ++A LFE F + G PD +Y+
Sbjct: 785 KQGLKPNTITYTTMIAGLAKAGNIAEASSLFER----------FKANGGV---PDSASYN 831
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
+++E + + + +++ + GC + TK L++A + +C LE A
Sbjct: 832 AIIEGLSYSRRAMEAYKIFEETRMKGCNI-HTKTCIALLDALQKDEC--LEQA 881
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 129/317 (40%), Gaps = 32/317 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L L +F+ M ++ + + +V + G L + L++ M
Sbjct: 201 YTTLIGALSSVQESDIMLTLFHQM-QELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEM 259
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L D+V+YN ++ + + + F +++ GL P
Sbjct: 260 KSN---------------CLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDV 304
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + V+ + + D E F +M ++ A Y ++ + GK +EA + +
Sbjct: 305 TYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQ 364
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ RG + + Y + CL GR +A+ E++K + + P T+ LI G
Sbjct: 365 KARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK--KDAAPNLSTYNVLIDMLCKAGE 422
Query: 471 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
++ + MK+ PN+ TVN M+ D KAK+L E + + S
Sbjct: 423 VEAAFKVRDAMKEAGLFPNVMTVNIMI------DRLCKAKKLDEACSIFEGMNHKICS-- 474
Query: 530 GAPLKPDEYTYSSMLEA 546
PDE T+ S+++
Sbjct: 475 -----PDEVTFCSLIDG 486
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/457 (19%), Positives = 172/457 (37%), Gaps = 72/457 (15%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V +D + WKF + GL+ + ++ L +A+ + + +
Sbjct: 273 VCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQ---M 329
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ R++ + Y ++ G AG+ EA + P + AY+ + LG+ G
Sbjct: 330 EQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKAR-GCIPSVIAYNCILTCLGKKGR 388
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E ++ E M++ + P+L YN +++ + + + F V
Sbjct: 389 LGEALRTFEEMKKDAA----------------PNLSTYNVLIDMLCKAGEVEAAFKVRDA 432
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++++GL P+ T + ++ + ++ K D F M + +T+ L+ ++G+
Sbjct: 433 MKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGR 492
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+++A R + ML +KI P + +T
Sbjct: 493 VDDAY-----------------------------RLYEQMLDSDKI-------PNAVVYT 516
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI S G +D IF+ M C P++ +NA + + K + LFEE
Sbjct: 517 SLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEI--- 573
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATA-HQWEYFEYVYKGMALSGCQLDQTKHAW 577
S G+ PD +YS ++ A E +E Y M GC LD +
Sbjct: 574 KSRGFI----------PDVMSYSILIHGLVKAGFARETYELFY-AMKEQGCVLDTHAYNT 622
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ ++GK + + + G P + + ++
Sbjct: 623 FIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVI 659
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/327 (18%), Positives = 130/327 (39%), Gaps = 23/327 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P Y ++ A + + +F Q+++ G + S + + V + G+ D
Sbjct: 194 FRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAAL 253
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M + + Y V + F + GK++ A ++ G++ Y + L
Sbjct: 254 SLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVL 313
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C R +A+ + E+++ R+ P + +I+ G D+ S+ + K C P+
Sbjct: 314 CKGNRLDEAVEIFEQMEQNRNV-PCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPS 372
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTR---ANSSGYTFL------SGD---------- 529
+ N +L + +A FEE + N S Y L +G+
Sbjct: 373 VIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDA 432
Query: 530 --GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
A L P+ T + M++ A + + +++GM C D+ L+ + G+
Sbjct: 433 MKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGR 492
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEML 614
++ +L++ +IP+ + +T ++
Sbjct: 493 VDDAYRLYEQMLDSDKIPNAVVYTSLI 519
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 176/429 (41%), Gaps = 54/429 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
++ G G +A+ +L G+ L ++ +++ L +GR EA +F
Sbjct: 246 IIMGFAKSGDPSKALQLL----GMAQATGLSAKTATLVSIISALADSGRTLEAEALFE-E 300
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKN 305
L + P AY+++ + G LK+ ++ M ++ P + ++ +
Sbjct: 301 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 360
Query: 306 WDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
W+ ++P+ V++ +L +W+ F V K+++ G+KP Y +
Sbjct: 361 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 420
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + D F +M G +T+ L+ + G+ A ME+RG
Sbjct: 421 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 480
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ A+ Y + + RW D ++ K+KS + P +T T L+ G +D
Sbjct: 481 CLPCATTYNIMINSYGDQERWDDMKRLLGKMKS-QGILPNVVTHTTLVDVYGKSGRFNDA 539
Query: 475 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----------------- 516
I + MK +P+ NA++ Y++ + +A F T
Sbjct: 540 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 599
Query: 517 ----RANSSGYT---FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
R ++ + ++ +G +KPD TY+++++A +++ VY+ M +SGC+
Sbjct: 600 FGEDRRDAEAFAVLQYMKENG--VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 657
Query: 570 LDQTKHAWL 578
D+ + L
Sbjct: 658 PDRKARSML 666
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 19/302 (6%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F++LR+SG+KP Y ++ +++G +M K G + TY +L+ A+
Sbjct: 297 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 356
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G+ A ++ ME V + V+ L + G WQ V++++KS+ KP +
Sbjct: 357 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI-GVKP-D 414
Query: 456 ITFTGLIISSMDGGH-IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
F ++I + + +D ++ F M + EP+ T N ++ + ++ A+E+FE
Sbjct: 415 RQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE 474
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
R P TY+ M+ + +W+ + + M G +
Sbjct: 475 AMERRGC-------------LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 521
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINA 632
H L+ ++G+ + + + G P + LI A Q E+AV
Sbjct: 522 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA-LINAYAQRGLSEQAVNAFRV 580
Query: 633 MA 634
M
Sbjct: 581 MT 582
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 156/383 (40%), Gaps = 45/383 (11%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A +V+ W+ K +Y+ L+ LG++ + +EA L+ + L P Y+
Sbjct: 121 AYAVVSWLQ--KHNLCFSYELLYSILIHALGRSEKLYEAF----LLSQKQTLTP--LTYN 172
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN-WDPV---------- 309
++ + +++ + LI +MRQ S I+++ R N D V
Sbjct: 173 ALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIE 232
Query: 310 ---LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
LE D+ + N ++ S + + +GL AT + + SG+
Sbjct: 233 RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTL 292
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F ++ +SG Y L++ + + G + +A + V ME+RGV Y L
Sbjct: 293 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 352
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
N GRW+ A +V++++++ +P F+ L+ D G + + MK
Sbjct: 353 DAYVNAGRWESARIVLKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 411
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+P+ N ++ + + + A F+ R S G ++PD T++++++
Sbjct: 412 KPDRQFYNVVIDTFGKFNCLDHAMTTFD---RMLSEG----------IEPDRVTWNTLID 458
Query: 546 ASATAHQWEYFEYVYKGMALSGC 568
+ E +++ M GC
Sbjct: 459 CHCKHGRHIVAEEMFEAMERRGC 481
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 50/422 (11%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K WR E ++ L D + + K+ +FV ++ + + T ++K +G + +W
Sbjct: 144 DKNWR---ERVKYLTDTI----LALKSEEFVAGVLEERRVQMTPTDFCFVVKWVGQQ-NW 195
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ + + + L+ +R V T +L +LGKA + A+ IF + ++ +
Sbjct: 196 QRALELYECL-NLRHWYAPNARMVAT-ILGVLGKANQEALAVEIF--ARAESSVGDTVQV 251
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIK------NMHRKNWDP 308
Y+++ + G ++ +L++ MR++ + R+K N+ + +
Sbjct: 252 YNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNE 311
Query: 309 V----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
V + PD++ YN +++AC + VF + +P TY + V + +
Sbjct: 312 VRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCAR 371
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
E F+++ G A+TY L+ AF EG + M +RG Y
Sbjct: 372 ARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNT 431
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
+ GR AM + +KS P +T+T LI S +++ ++ M D
Sbjct: 432 IIHMYGKQGRHDQAMQIYRDMKS-SGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDA 490
Query: 485 -CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
+P + T +A++ Y++ +A+E F R+ +KPD YS M
Sbjct: 491 GVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSG-------------IKPDRLAYSVM 537
Query: 544 LE 545
L+
Sbjct: 538 LD 539
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 176/431 (40%), Gaps = 43/431 (9%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL------------ 310
DI+ Y + T G++ + ++ L+ +RQ+ SK M RK W+ ++
Sbjct: 773 DISVYIDIVETYGKLKIWQKAESLVGSLRQRCSK----MDRKVWNALIHAYAFSGCYERA 828
Query: 311 ------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
P + N +L A + + ++ V ++L+ GLK S ++ L +E
Sbjct: 829 RAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEA 888
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
Q+G V + + M +G Y++++R + ++ + + ME+ G
Sbjct: 889 FAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPD 948
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
+ + ++ ++ +KI+ KP E T+ LII ++ S+
Sbjct: 949 LQICNSILKLYLGIEDFKSMGIIYQKIQDA-SLKPDEETYNTLIIMYCRDRRPEEGFSLM 1007
Query: 479 QHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
M+ EP + T +++ +++ M+ +A+ELFEE S+GY K D
Sbjct: 1008 NKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEEL---RSNGY----------KLDR 1054
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 597
Y M++ T+ E + M SG + + L+V ++G+ E+ +
Sbjct: 1055 AFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKN 1114
Query: 598 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRIS 657
L G + L ++ ++ + + +++ + + M A R WT +
Sbjct: 1115 LRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEG 1174
Query: 658 RDKLEKLLNAL 668
++ LLNAL
Sbjct: 1175 TNEAIVLLNAL 1185
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 115/280 (41%), Gaps = 22/280 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y L++ + EA+ +F+ M E PD+ Y+++ G+ ++ +L +
Sbjct: 322 ITYNTLISACSRESNLEEAVAVFSDM-ESHRCQPDLWTYNAMISVYGRCARARKAEELFK 380
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+ K PD V YN++L A + V + +++ K G
Sbjct: 381 ELESKG---------------FFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQD 425
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + + G++D + +R M SG A+TY VL+ + + K+ EA +
Sbjct: 426 EMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMS 485
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSM 466
M GV T Y L C G+ ++A E +R S KP + ++ ++ +
Sbjct: 486 EMLDAGVKPTLHTYSALICAYAKAGKREEAE---ETFNCMRRSGIKPDRLAYSVMLDFFL 542
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF 505
+ + ++ M ++ P+ G M+ R +M+
Sbjct: 543 RFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMW 582
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 139/325 (42%), Gaps = 18/325 (5%)
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+A + V+ ++ + L E F + A+S Y ++ + G+ ++
Sbjct: 213 PNARMVATILGVLGKANQEALAVEIFAR-AESSVGDTVQVYNAMMGVYARNGRFSKVKEL 271
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIIS 464
+ M +RG V + L +G + L ++ + +R S +P IT+ LI +
Sbjct: 272 LDLMRERGCVPDLVSFNTLINARMKSGAMEPN-LALQLLNEVRRSGIRPDIITYNTLISA 330
Query: 465 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
++++ +++F M+ H C+P++ T NAM+ VY R KA+ELF+E S G+
Sbjct: 331 CSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKEL---ESKGF 387
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
PD TY+S+L A + E + + M G D+ + ++
Sbjct: 388 F----------PDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYG 437
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
+ G+ + + +G P + +T ++ S E+A +++ M A T
Sbjct: 438 KQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLH 497
Query: 644 QWTELFESNEDRISRDKLEKLLNAL 668
++ L + R++ E+ N +
Sbjct: 498 TYSALICAYAKAGKREEAEETFNCM 522
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 24/262 (9%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+ ++ + GL ++ +L L+ G+ + + + G+K + VY +
Sbjct: 864 YVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYN---GMKAAGYFPTMHVYRIM 920
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ-- 292
L +L K R + + M E+ PD+ +S+ + K + + ++++
Sbjct: 921 LRLLCKCKRVRDVETMLCEM-EEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDAS 979
Query: 293 -KPSKRIKN----MHRKNWDPV-------------LEPDLVVYNAVLNACVPSHQWKGVF 334
KP + N M+ ++ P LEP L Y +++ A ++
Sbjct: 980 LKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAE 1039
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
+F++LR +G K A Y L M+ SG + M +SG T +L+ ++
Sbjct: 1040 ELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSY 1099
Query: 395 WEEGKINEAVAAVRNMEQRGVV 416
+ G+ EA ++N+ GVV
Sbjct: 1100 GKSGQPEEAENVLKNLRTTGVV 1121
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 146/330 (44%), Gaps = 21/330 (6%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
G F + L+ GL G R A+ +L V G + ++ +Y ++ + K
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV---VMYNTIIDSMCKVKLV 241
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+EA +F+ M+ + PD+ Y ++ +G L + + L +M ++N
Sbjct: 242 NEAFDLFSEMISK-GISPDVVTYSALISGFCILGKLNDAIDLFNKMI------LEN---- 290
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
++PD+ +N ++NA + K VF + K G+KP+ TY M+ +
Sbjct: 291 -----IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
+ F MA+ G +Y +++ F + K +EA+ + M ++ ++ Y
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
L L +GR A+ +V+++ R P T+ ++ + +D I++ +KD
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHD-RGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464
Query: 485 -CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
+PN+ T + ++K ++ A+++FE
Sbjct: 465 GIQPNMYTYSILIKGLCQSGKLEDARKVFE 494
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ ++ K + EA+ +F M N+ PD+ Y S+ L + G + ++L+++M
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRK-NIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
D + P + YN++L+A HQ + +L+ G++P+
Sbjct: 427 H---------------DRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMY 471
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + ++ + QSGK + + F + G + TY ++++ F EG NEA+A + M
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKM 531
Query: 411 EQRGVVGTASVY 422
E G + A Y
Sbjct: 532 EDNGCIPDAKTY 543
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/323 (18%), Positives = 124/323 (38%), Gaps = 15/323 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD + + ++ Q + F ++ G +YG + + + G+ +
Sbjct: 153 PDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDL 212
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+++ + + Y ++ + + +NEA M +G+ Y L C
Sbjct: 213 LQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCI 272
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIG 490
G+ DA+ + K+ L + KP TF L+ + G + + ++F MK +PN
Sbjct: 273 LGKLNDAIDLFNKM-ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFV 331
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N+++ Y +KAK +F + + PD +YS M+
Sbjct: 332 TYNSLMDGYCLVKEVNKAKSIFNTMAQGG-------------VNPDIQSYSIMINGFCKI 378
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+++ ++K M D ++ L+ S++G+ D + + G P +
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTY 438
Query: 611 TEMLIQAIVQSNYEKAVALINAM 633
+L +KA+AL+ +
Sbjct: 439 NSILDALCKIHQVDKAIALLTKL 461
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/372 (17%), Positives = 134/372 (36%), Gaps = 63/372 (16%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
+ +Y S + T + + V L R+ + R P E +N +L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRL----------LRRNTTPPAFE-----FNKILG 93
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+ V S + V ++ +++ G+KP+ + + Q G F K+ K G
Sbjct: 94 SLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVP 153
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+T+ L++ +G+I +A + G Y L LC G + A+ ++
Sbjct: 154 DTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLL 213
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRN 502
+++ DG + +PN+ N ++ +
Sbjct: 214 QRV---------------------DGNLV--------------QPNVVMYNTIIDSMCKV 238
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+ ++A +LF E S G + PD TYS+++ + ++
Sbjct: 239 KLVNEAFDLFSEMI---SKG----------ISPDVVTYSALISGFCILGKLNDAIDLFNK 285
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M L + D L+ + GK + FD +++ G P+ + + ++ +
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 623 YEKAVALINAMA 634
KA ++ N MA
Sbjct: 346 VNKAKSIFNTMA 357
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 164/408 (40%), Gaps = 45/408 (11%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
K + G+ G+ EA I + M E ++ + Y+S+ G+ GL ++ ++L E+M++
Sbjct: 155 KQMNTYGQQGKIEEAEHIMDTM-ERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKE 213
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
LEPD V Y+ ++ AC + + + F+ +++ G+ P+++ +
Sbjct: 214 AG---------------LEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNF 258
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ + ++ + M G + T +VRA+ G+ + V + + +
Sbjct: 259 NTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLRE 318
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
G V Y L ++A+ V ++ + P E LI + D G +
Sbjct: 319 AGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMA-PKEYMCRSLICACKDAGMFE 377
Query: 473 DCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE----TTRANSSGYTFLS 527
D ++F+ M+ P++ T M+ V+ +A+ELF ++ + Y +
Sbjct: 378 DATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVII 437
Query: 528 G---------------------DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
DG L PD YTY SML + E +Y + S
Sbjct: 438 NVYMRYGMHEEAFRIYKLMEEEDG--LLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNS 495
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+LD+ +L +R + F +++ G IP+ + F M+
Sbjct: 496 DVELDEVMCNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMI 543
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 101/486 (20%), Positives = 186/486 (38%), Gaps = 66/486 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M ++GL E ++ G G R A LD+ +K + + + L+++ GK
Sbjct: 211 MKEAGLEPDEVTYSCMIGACGRAGKLRDA---LDYFQAMKRLGIMPASSNFNTLISLYGK 267
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR--------- 291
A +R+ M ++ PD +V + G K++V+++ +R
Sbjct: 268 ARNVVGIVRVLADM-KNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTE 326
Query: 292 --------------QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
QK + + + RK + P + +++ AC + ++ VF
Sbjct: 327 SYGTLLHVYLKCNLQKEALSVFSAMRK---AGMAPKEYMCRSLICACKDAGMFEDATNVF 383
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+ ++ +G+ PS T + V G E FR + S + + Y V++ +
Sbjct: 384 RDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRY 443
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK-SLRHSKPL-- 454
G EA + ME+ + S Y +C Q E+I LR+S
Sbjct: 444 GMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQ---AEEIYWRLRNSDVELD 500
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKE--- 510
E+ ++ + +++ IFQ M D C PN T N M+ +Y ++ M +A++
Sbjct: 501 EVMCNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASK 560
Query: 511 LFEETTRANSSGYTFL----------------------SGDGAPLKPDEYTYSSMLEASA 548
L ++ A+ ++ L +G G L+ Y+ +L+A
Sbjct: 561 LAQQLGVADKITFSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLE----AYNCVLDAYG 616
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A + E V M SG Q+D + L+ R K +E F + E G IP
Sbjct: 617 KAGHLDKLEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRW 676
Query: 609 FFTEML 614
+ M+
Sbjct: 677 TYNTMI 682
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 164/420 (39%), Gaps = 77/420 (18%)
Query: 179 RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAIL 238
R M +G++ + ++ G KG +QA + + K D+ Y ++ +
Sbjct: 384 RDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDI---IAYNVIINVY 440
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
+ G EA RI+ LM E+ L PD YHS+ + L + ++ R+R
Sbjct: 441 MRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSD---- 496
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
+E D V+ N VLN C F L +
Sbjct: 497 -----------VELDEVMCNCVLNTCAR----------FLPLEE---------------- 519
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
VH+ F++M G +T+ V++ + + G ++ A A + +Q GV
Sbjct: 520 ---------VHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLGVADK 570
Query: 419 ASVYYELACCLCNNGRWQD---AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ + + + G+ QD + ++++ H LE + ++ + GH+D
Sbjct: 571 IT----FSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLE-AYNCVLDAYGKAGHLDKLE 625
Query: 476 SIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
+ M K + ++ + N ++ +Y R+ ++ + LF + G+
Sbjct: 626 DVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFH---KMQEEGFI---------- 672
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
PD +TY++M+ A + +K M SG D+ + L+ +AG +LLE A
Sbjct: 673 PDRWTYNTMIRTYGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAG--NLLEAA 730
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 32/252 (12%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN + QW + + Q+ G P T+ + ++ D F+ M
Sbjct: 14 YNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATRAFQMML 73
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ G LTY +++ + + GK+ +A A +M Q G+ A+ Y + G ++
Sbjct: 74 EKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVAA-YSAMIAIYTRCGFFE 132
Query: 437 DAMLVVE-----KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
A ++E KI R + ++ G G I++ I M + ++G
Sbjct: 133 KAEKIMEDMWNHKIAPDRDNWLKQMNTYG------QQGKIEEAEHIMDTM-ERLGMHLGV 185
Query: 492 V--NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
V N+M+ Y + ++ KA LFE+ A L+PDE TYS M+ A
Sbjct: 186 VGYNSMITAYGKAGLYEKALRLFEKMKEAG-------------LEPDEVTYSCMIGACGR 232
Query: 550 AHQ----WEYFE 557
A + +YF+
Sbjct: 233 AGKLRDALDYFQ 244
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 187/447 (41%), Gaps = 71/447 (15%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P + +YN +L+A + ++++ + ++ ++K GL P+ TY + ++ + ++ + D H+
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHK 200
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F +M+ G A+TY +V + + GKI++A R + R + VY L +C
Sbjct: 201 LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELAGR-FKPSVPVYNALIDGMC 255
Query: 431 NNGRWQDAMLVVEK----------------IKSLRHSKPLEI------------------ 456
GR + A+ ++ + I SL S +E+
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
TFT LI G + + + +++ M +D CEPN+ N ++ N +A ++ ++
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375
Query: 516 TRA----NSSGYTFL------SGD--GAP----------LKPDEYTYSSMLEASATAHQW 553
R+ N + Y+ L SGD GA +P+ TY+ M++ +
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
+ + + M L GC + + G+ + + G +P+ + E+
Sbjct: 436 DQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNEL 495
Query: 614 LIQAIVQSNYEKAVAL---INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 670
L + YE+A L I A P +T T L+ + + + L+ AL
Sbjct: 496 LDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN--TVLYGFSRAGMMGEALQLFGKALVR 553
Query: 671 CNAASSEITVSNLSRALHALCRSEKER 697
A S IT + + +HA C+ K +
Sbjct: 554 GTAPDS-ITYNTM---IHAYCKQGKVK 576
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/315 (18%), Positives = 138/315 (43%), Gaps = 30/315 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ G+ +EAL ++ LM++D P++ AY+++ L G L+E +++ ++M
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ P++ Y+ +++ S G + ++ G +P+
Sbjct: 376 QRSGCL---------------PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++V+ ++ +D + KM G +T+ ++ G++ A+ + M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ G + + Y EL L ++++A + ++I++ R+ +P +T+ ++ G
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA-RNLQPNLVTYNTVLYGFSRAGM 539
Query: 471 IDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ + + +F + + P+ T N M+ Y + A +L E +
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE--------- 590
Query: 530 GAPLKPDEYTYSSML 544
PD TY+S++
Sbjct: 591 ---WHPDIITYTSLI 602
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/305 (19%), Positives = 127/305 (41%), Gaps = 20/305 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL GS +A+ V D ++ L + Y+ L+ K+G A +N M+
Sbjct: 355 LIHGLCSNGSLEEALQVCDQ---MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P++ Y + L + + + L+E+M + P+ +
Sbjct: 412 SH-GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCT---------------PNTM 455
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N + + + + + ++++ G P+ TY ++ + + KY+ F+++
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+TY ++ F G + EA+ RG + Y + C G+
Sbjct: 516 EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNA 494
+ A +VE++ S++ P IT+T LI + + +I++ ++ + + PN T NA
Sbjct: 576 KIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNA 635
Query: 495 MLKVY 499
+++ +
Sbjct: 636 LVRCF 640
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 117/302 (38%), Gaps = 20/302 (6%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
V ++ +Q++ G+ + + + G + + F ++ + G Y L+
Sbjct: 93 VQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLD 152
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHS 451
A E K NM++ G++ Y L LC N R A L VE S +
Sbjct: 153 ALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVE--MSNKGC 210
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P +T+T ++ S G IDD + + +P++ NA++ + A +L
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDDA----RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKL 266
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
E + +G + P+ +YS ++ + + E ++ M L GC +
Sbjct: 267 LGE-----------MMDNG--VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDAN 313
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
L+ GK + + +++ G P+ + + ++ + E+A+ + +
Sbjct: 314 IHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCD 373
Query: 632 AM 633
M
Sbjct: 374 QM 375
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 160/412 (38%), Gaps = 36/412 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + +LA L + RI+ LM ++ PD+ Y + L + G + + +++++
Sbjct: 137 FAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLD 196
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS--GLK 346
M R++ D + PD+V N V++ S + + +Q S G
Sbjct: 197 -----------GMSRQDLD--IRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCP 243
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ + G + +E KM G +T +V G+ A+
Sbjct: 244 PNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEF 303
Query: 407 VRNMEQRGV----VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
R E+R V G A Y L L + AM + + S HS P I + +I
Sbjct: 304 FR--EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHS-PDAIMYFTMI 360
Query: 463 ISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G ++D S+ MK+ + + N ++ + R +A EL +E
Sbjct: 361 SGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG-- 418
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
++PD TY+++L S A + + + M GCQ L+
Sbjct: 419 -----------IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ GK S+ E+G P+ + + ++ + + + A+ L + M
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD Y ++ L Q G L++ + M++ K D YN ++
Sbjct: 351 PDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL---------------DTKAYNILI 395
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + + +++++ G++P TY + ++G + V E KM G
Sbjct: 396 AGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ 455
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+T+ LV + + GKI+EA+ +R+M++ G+ +Y L LC G A+ +
Sbjct: 456 PSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIEL 515
Query: 442 VEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 497
+++K S P + TF L+ D + + M+ + C P+ TV+ +++
Sbjct: 516 FDEMK--EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 138/348 (39%), Gaps = 27/348 (7%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD ++ PD++ YN +++A +K + +L ++ P+ T
Sbjct: 146 KQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDT 205
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y L ++ SG + F +M K G A+ Y + + G +AV M+
Sbjct: 206 YALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK 265
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+ + + Y L + A+ V +++S + KP TFT L+ + G
Sbjct: 266 RDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRS-QKCKPNICTFTALVNAFAREGLC 324
Query: 472 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ IF+ +++ EP++ NA+++ YSR A E+F
Sbjct: 325 EKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC---------- 374
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+PD +Y+ M++A A E + V++ M G H LL SRAGK
Sbjct: 375 ---EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAK 431
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
E + + ++G P ML +EK ++ AM P+
Sbjct: 432 CEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPY 479
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 152/389 (39%), Gaps = 71/389 (18%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML- 255
+ GL G ++A+ + + +K R S YT L+ + GKA + + AL++F+ M
Sbjct: 245 IDGLMKGGDTQKAVEIFER---MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRS 301
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ C P+I + ++ + GL ++ ++ E++++ LEPD+
Sbjct: 302 QKCK--PNICTFTALVNAFAREGLCEKAEEIFEQLQEAG---------------LEPDVY 344
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YNA++ A + G +F ++ G +P A+Y + ++ ++G ++ F M
Sbjct: 345 AYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVM 404
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G ++ +L+ A+ GK+ + V M + G+
Sbjct: 405 KRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGI-------------------- 444
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNA 494
KP ++ G + + M+ P +I T N
Sbjct: 445 ----------------KPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNI 488
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ +Y R F++ +ELF N L PD T++S + A + Q+
Sbjct: 489 LINIYGRAGFFARMEELFRSLPARN-------------LIPDVVTWTSRIGAYSRRKQYN 535
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
V++ M +GC D LL S
Sbjct: 536 RCLEVFEEMIDAGCYPDGGTAKVLLSACS 564
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 129/323 (39%), Gaps = 15/323 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P VVYNA ++ + + +F+++++ +PS ATY + + + ++ K + +
Sbjct: 236 PSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKV 295
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F +M T+ LV AF EG +A +++ G+ Y L
Sbjct: 296 FHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSR 355
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 490
G A + ++ + +P ++ ++ + G +D ++F+ MK P +
Sbjct: 356 AGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMK 414
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ +L YSR +K +E+ + ++ +KPD + +SML
Sbjct: 415 SHMLLLSAYSRAGKVAKCEEIVNQMHKSG-------------IKPDTFVLNSMLNLYGRL 461
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
Q+E E V M D + + L+ RAG +E F SL IP + +
Sbjct: 462 GQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTW 521
Query: 611 TEMLIQAIVQSNYEKAVALINAM 633
T + + Y + + + M
Sbjct: 522 TSRIGAYSRRKQYNRCLEVFEEM 544
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 38/252 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ +AG P+ A IF+LM + PD A+Y+ + G+ GL ++ + E
Sbjct: 344 YAYNALMEAYSRAGFPYGAAEIFSLM-QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 402
Query: 289 RMRQ------------------------KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
M++ K + + MH+ ++PD V N++LN
Sbjct: 403 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG----IKPDTFVLNSMLNLY 458
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
Q++ + V + K +TY + + + ++G + + E FR +
Sbjct: 459 GRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDV 518
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV---GTASVYYELACCLCNNG-RWQDAML 440
+T+ + A+ + N + M G GTA V C+NG + Q+
Sbjct: 519 VTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLS----ACSNGDQIQEVTT 574
Query: 441 VVEKI-KSLRHS 451
V+ + K +R S
Sbjct: 575 VIRTMHKDMRTS 586
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/533 (19%), Positives = 202/533 (37%), Gaps = 115/533 (21%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + + G++ L+ G G W++ +L + ++
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM--VR 258
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D + + L+ L K GR EA + +M + PDI Y+++ +
Sbjct: 259 ENVD-PDDYTFNILIDALCKEGRILEAQGVLAMMSKR-GEKPDIVTYNALMEGYCSRENV 316
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E +L RM ++ LEPD++ YN +++ + +FK+L
Sbjct: 317 HEARELFNRMVKRG---------------LEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
L P+ A+Y ++ + SG+ V + +M S + +TY +L+ A +EG+I
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
EA+ + M ++GV KP +T+
Sbjct: 422 LEALGVLVMMMKKGV------------------------------------KPNIVTYNA 445
Query: 461 LIISSMDG----GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+ MDG +++ IF M K EP+I N ++ Y + +M +A LF+E
Sbjct: 446 M----MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
N L PD +Y+S+++ C L + H
Sbjct: 502 RHKN-------------LIPDIASYNSLIDGL--------------------CNLGRIPH 528
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA- 634
++ D + ++G+ P + + +L ++KA++L +
Sbjct: 529 ---------------VQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Query: 635 --YAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSR 685
+ F+ L + + +++ D L+ LL C+ N + I ++ L +
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 153/387 (39%), Gaps = 77/387 (19%)
Query: 110 RENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSERE 169
REN+ E +E+F + + L+ DV +Y VL+D + +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVL---NY--------------------NVLIDGYCKTK 349
Query: 170 MTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF 229
M + + + L+ T L+ GL + G +LD ++G D+ +
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT-- 407
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ L K GR EAL + +M++ + P+I Y+++ + R
Sbjct: 408 -YNILIDALCKEGRILEALGVLVMMMKK-GVKPNIVTYNAM------------MDGYCLR 453
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+K I N K+ LEPD++ YN ++N + +FK++R L P
Sbjct: 454 NNVNVAKDIFNRMVKSG---LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI 510
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF--------------- 394
A+Y ++ + G+ V E +M SG++ +TY +L+ AF
Sbjct: 511 ASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ 570
Query: 395 -----WEEGKINEAVA--------------AVRNMEQRGVVGTASVYYELACCLCNNGRW 435
W + N A+ A++++ G Y L LC +G +
Sbjct: 571 IVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSF 630
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLI 462
+AML++ K++ P ITF +I
Sbjct: 631 GEAMLLLSKMED-NDRPPDAITFEIII 656
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/384 (18%), Positives = 153/384 (39%), Gaps = 22/384 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P V++ +L A V + +F QL+ G+ PS AT+ + +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+ KSG +T+ ++ F G I +A+ +N+ +G + Y L L
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
NG+ + A+ ++++++ +P + ++ LI G + D + + + + +
Sbjct: 173 NGQIKAALHLLQEMEK-SSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N+++ + + +L + R N + PD+YT++ +++A
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVREN-------------VDPDDYTFNILIDALCKE 278
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ + V M+ G + D + L+ H F+ +++ G P L +
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE--SNEDRISRDKLEKLLNAL 668
++ ++A+ L + T + L + N RIS K KLL+ +
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK--KLLDEM 396
Query: 669 CNCNAASSEITVSNLSRALHALCR 692
+ +A ++ N+ + ALC+
Sbjct: 397 -HGSAQPPDVVTYNI--LIDALCK 417
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 103/273 (37%), Gaps = 50/273 (18%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA------------------- 350
+ P + + ++N F + + KSG +P+
Sbjct: 86 ISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKAL 145
Query: 351 ----------------TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
TYG + + ++G+ ++M KS + Y L+
Sbjct: 146 DFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGL 205
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
++G +++A+ + +RG++ A Y L C+ GRWQ+ ++ K+ + P
Sbjct: 206 CKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR-ENVDPD 264
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFE 513
+ TF LI + G I + + M E P+I T NA+++ Y + +A+ELF
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ L+PD Y+ +++
Sbjct: 325 RMVKRG-------------LEPDVLNYNVLIDG 344
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ K EA+ +F M NL PDIA+Y+S+ L +G + + +L++ M
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536
Query: 291 --------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ +P + ++ R+ + + PD +A+++ +
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNHAIVDNLCKGEKL 595
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
K K L G P+ TY + + + + G + KM + A+T++++
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVV 416
+ + + ++A M RG+V
Sbjct: 656 IGVLLQRNETDKAEKLREEMIARGLV 681
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 146/352 (41%), Gaps = 33/352 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y KLL +L KA + EA +F+ +LED L P A + ++ Q K+ +++ E
Sbjct: 36 TYLKLLTMLAKAKQAAEASNVFDCLLED-KLRPTTAIFTALLTVFTQSNQFKKALEIFES 94
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR PD Y A++ C + + +F ++ G+KPS
Sbjct: 95 MRLYEG--------------CVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSI 140
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + ++G + V M + A +T+ L+R F KI E A
Sbjct: 141 VTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEG 200
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDG 468
+ ++G+ L G ++ V + ++ R++ P+ IT+ ++ +
Sbjct: 201 LLRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQ--RYNYPMTRITYNIIMEAYGRA 258
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G +D ++ MK + +PN T +ML Y R+ + +++ + +++
Sbjct: 259 GMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAA------ 312
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
D Y++ ++A A +E E +++ M L G D ++ L+
Sbjct: 313 --------DTAVYNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILI 356
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 146/354 (41%), Gaps = 50/354 (14%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
LKLL L +A +V D + L+DK + ++T LL + ++ + +AL IF
Sbjct: 38 LKLLTMLAKAKQAAEASNVFDCL--LEDKLR-PTTAIFTALLTVFTQSNQFKKALEIFES 94
Query: 254 M--LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR---QKPSKRIKNMHRKNWDP 308
M E C PD Y ++ + GL + K+ + M KPS N+ +
Sbjct: 95 MRLYEGC--VPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGK 152
Query: 309 V-----------------LEPDLVVYNAV-----LNACVPSHQWKGVFWVFKQLRKSGLK 346
+ PD V +N + LN +P + ++ L + GL+
Sbjct: 153 AGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEME-----QAYEGLLRQGLQ 207
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P T + +G ++ + + M + + +TY +++ A+ G +++
Sbjct: 208 PDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEET 267
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M+ V +S + + +G W + VEK+ +R ++ + T + +++
Sbjct: 268 WKRMKAEFVKPNSSTFCSMLSAYGRHGYWHN----VEKV--MRQARYFDAADTAVYNAAI 321
Query: 467 D----GGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
D + +D IF+ M K H P+ T + ++ Y R KA++L EE
Sbjct: 322 DAFQRAQNFEDMEKIFEEMKLKGHA-PDDVTYSILIGAYERIRRVDKARDLQEE 374
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 136/393 (34%), Gaps = 60/393 (15%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
DL Y +L + Q VF L + L+P+ A + + V QS ++ E F
Sbjct: 33 DLSTYLKLLTMLAKAKQAAEASNVFDCLLEDKLRPTTAIFTALLTVFTQSNQFKKALEIF 92
Query: 373 RKM-AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
M G TY +++ E G +A M GV
Sbjct: 93 ESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGV---------------- 136
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 490
KP +T+ LI G + + M+ ++ P+
Sbjct: 137 --------------------KPSIVTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTV 176
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N +++V+ N + ++ +E R L+PD T +S++ A TA
Sbjct: 177 TWNTLIRVFGLNCKIPEMEQAYEGLLRQG-------------LQPDMVTLNSLISAYGTA 223
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+E E V + M + + + ++ RAG +E + + P+ F
Sbjct: 224 GLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEETWKRMKAEFVKPNSSTF 283
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR----DKLEKLLN 666
ML + ++ Y F + T ++ + D R + +EK+
Sbjct: 284 CSMLSAYGRHGYWHNVEKVMRQARY--FDAAD---TAVYNAAIDAFQRAQNFEDMEKIFE 338
Query: 667 ALCNCNAASSEITVSNLSRALHALCRSEKERDL 699
+ A ++T S L A + R +K RDL
Sbjct: 339 EMKLKGHAPDDVTYSILIGAYERIRRVDKARDL 371
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 152/353 (43%), Gaps = 34/353 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G +A+R++ ++ D P++A Y+ + L ++G+ KE + ER
Sbjct: 231 CYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWER 290
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + N H +PD++ Y +++ S V+ ++ K+GL P
Sbjct: 291 M-------VANNH--------QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDV 335
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ +G+ +F+ M+ SG +Y ++++ ++ G +++A
Sbjct: 336 VIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWEL 394
Query: 410 MEQRGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMD 467
+E+ + V + + LC G ++ ++E+ ++ K L E +++ +I
Sbjct: 395 LEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEART--SGKELDEFSYSSMISGLCK 452
Query: 468 GGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +DD + +++ + D +PN NA++ + + FS A ++ + + S
Sbjct: 453 DGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCS----- 507
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
P TY++++ A ++ + M GC LD + L+
Sbjct: 508 --------PTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLI 552
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 149/344 (43%), Gaps = 26/344 (7%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
WKF M+ SG+ + +LKGL D G +A + W KD ++ +
Sbjct: 355 WKFWDSMSVSGIRNVTSYNI-MLKGLFDGGMVDKATDL--WELLEKDDSLSPDMVTFSTM 411
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYP---DIAAYHSVAVTLGQVGLLKELVKLIERMR 291
+ L + G +++L+I LE+ D +Y S+ L + G L + VKL E++
Sbjct: 412 IHGLCEKGFANKSLQI----LEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKIS 467
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K P+ +YNA++N + ++ V+ Q+ ++ P+ T
Sbjct: 468 MDSFK---------------PNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTIT 512
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + + ++ KY F R+M + G + TY L+R + KI+ A+A +
Sbjct: 513 YNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQIL 572
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+G+ ++ L LC+ G+ +A ++ ++K + P +T+ L+ + G
Sbjct: 573 DKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCF 632
Query: 472 DDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
D S++ +++ P+I + N +K + + +L E
Sbjct: 633 DKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNE 676
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 98/281 (34%), Gaps = 51/281 (18%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG----LKPSAATYGLAMEVMLQSGKYD 366
P + +NA+L+A V + ++ F L + P+ TY + + + G D
Sbjct: 117 NPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLD 176
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F + G A +TY L+ F + +++ A+ + M V A Y L
Sbjct: 177 RAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALL 236
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 486
NG ++ AM V E++ D G
Sbjct: 237 GGCFRNGEFEKAMRVWEQLVR-------------------DPG---------------AS 262
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ T N ML + MF +A +++E N +PD TY +M+
Sbjct: 263 PNLATYNVMLDGLCKLGMFKEAGDVWERMVANNH-------------QPDMITYGTMIHG 309
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ + VY M +G D + LL AG+
Sbjct: 310 LCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGR 350
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 152/415 (36%), Gaps = 73/415 (17%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P+L YN +L + +F LR GL P TY M +++ + D
Sbjct: 155 IAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNAL 214
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM-EQRGVVGTASVYYELACC 428
+M A+ Y L+ + G+ +A+ + G + Y +
Sbjct: 215 YLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDG 274
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
LC G +++A V E++ + H +P IT+ +I +D ++ M K P
Sbjct: 275 LCKLGMFKEAGDVWERMVANNH-QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVP 333
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYTFLSG--DGA---------- 531
++ N++LK + +A + ++ + R +S L G DG
Sbjct: 334 DVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWE 393
Query: 532 ------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
L PD T+S+M+ KG A K +L EA +
Sbjct: 394 LLEKDDSLSPDMVTFSTMIHG-----------LCEKGFA--------NKSLQILEEARTS 434
Query: 586 GKCHLLEHAFDSLLEA----GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP-FHI 640
GK L E ++ S++ G + + E + + N ALIN A F
Sbjct: 435 GK-ELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSD 493
Query: 641 TERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
R ++++ E+ + + + IT + L +H LC++EK
Sbjct: 494 AIRVYSQMAEN--------------------DCSPTTITYNTL---IHGLCKAEK 525
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 99/244 (40%), Gaps = 20/244 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y L+ +A + +A+R+++ M E DC+ P Y+++ L + E +
Sbjct: 477 IYNALINGFCQASKFSDAIRVYSQMAENDCS--PTTITYNTLIHGLCKAEKYLEASRFTR 534
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K D+ Y +++ + G ++ Q+ GL+
Sbjct: 535 EMLEKGCML---------------DVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTD 579
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMA-KSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ + + + +GK D + +M K+ +TY L+ F+E G ++A +
Sbjct: 580 VVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLW 639
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ + G+V Y LC+ R + + ++ ++ + P IT+ L+ + +
Sbjct: 640 MAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLA-SGIIPTAITWNILVRAVIK 698
Query: 468 GGHI 471
G I
Sbjct: 699 YGPI 702
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/515 (20%), Positives = 203/515 (39%), Gaps = 63/515 (12%)
Query: 87 RIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWH 146
++ RL F N +R++L E +FEK
Sbjct: 153 KVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK----------------------MS 190
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
E+ R + +L+ L E + ++ + M + G + L+K D G
Sbjct: 191 KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 250
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+AM +LD + K + + YT L+ L + G+ EA +F ML+ L P I
Sbjct: 251 DKAMKMLDE---MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH-GLCPGIIT 306
Query: 267 YHSVAVTLGQVGLLK---ELVKLIERMRQKPSKRIKN-----------------MHRKNW 306
++++ + G + +L+ ++E+ KP+ R N + R+
Sbjct: 307 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVV 366
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D L PD V YN +++ Q F +F + +GL+P T+ ++ + + G+ +
Sbjct: 367 DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLE 426
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ M K G ++ +T+ L+ + GK + NM + + TA +
Sbjct: 427 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 486
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 484
L + + +A ++ K+ +++ P +T T LI G + + + MK
Sbjct: 487 DALGKDYKLNEANAMLGKM--MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 544
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
C PN+ T ++ N +A ET + S + + P+ +TY+ ++
Sbjct: 545 CSPNVYTYTIIINGLCNNGRVEEA-----ETILFSMSSF--------GVSPNHFTYAVLV 591
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+A A + + + M +GCQ + ++ LL
Sbjct: 592 KAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 626
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 176/451 (39%), Gaps = 63/451 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L +AGR EA ++ M+E P Y + +G+ + +K+++ M
Sbjct: 202 YSILIHGLCEAGRLEEAFQLKQEMVEK-GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 260
Query: 291 RQKPSKRIKNMH----------------------RKNWDPVLEPDLVVYNAVLNACVPSH 328
K + N+H RK L P ++ +NA++N
Sbjct: 261 ATKAC--VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG 318
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
F + + K KP+ TY ME + + K R++ +G +TY
Sbjct: 319 WVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYN 378
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV----VEK 444
+LV F +EG++N A +M G+ + L LC GR + A + V+K
Sbjct: 379 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 438
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML------- 496
SL E+TFT LI G D +F++M ++ C T N L
Sbjct: 439 GISLD-----EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 493
Query: 497 KVYSRNDMFSKAKE------------LFEETTRANSSGYTFLSGD---GAPLKPDEYTYS 541
K+ N M K + L E RA + + + A P+ YTY+
Sbjct: 494 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 553
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSL 598
++ + E E + M+ G + +A L+ +AG+ L+ AF ++
Sbjct: 554 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR---LDRAFQIVSTM 610
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
++ G P+ ++ +L ++ + A AL
Sbjct: 611 VKNGCQPNSHIYSALLSGFVLSNTAIGARAL 641
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 171/467 (36%), Gaps = 91/467 (19%)
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E ++ E+M ++ S R P+ V Y+ +++ + + + F + ++
Sbjct: 179 LGEAFRVFEKMSKEESCR--------------PNSVTYSILIHGLCEAGRLEEAFQLKQE 224
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+ + G +PS TY + ++ G D + +MA TY +L+ EGK
Sbjct: 225 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 284
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
I EA R M + G LC P ITF
Sbjct: 285 IEEANGVFRKMLKHG--------------LC----------------------PGIITFN 308
Query: 460 GLIISSMDGGHIDDCISIFQHM----KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL---- 511
LI G + +S FQ + K +C+PNI T N +++ R KA L
Sbjct: 309 ALINGYCKEGWV---VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 365
Query: 512 ------------------FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
F + + N + F S + A L+PD +T++++++ +
Sbjct: 366 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 425
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
E + M G LD+ L+ + GK + F++++E + F
Sbjct: 426 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 485
Query: 614 LIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFESNEDRISRDKLEKLLNALC 669
L +A A++ M P +T E + E +S LE++ A C
Sbjct: 486 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 545
Query: 670 NCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLH 716
+ N + I ++ L E E L S + FG +SP H
Sbjct: 546 SPNVYTYTIIINGLCNNGRV---EEAETILFSMSSFG-----VSPNH 584
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 5/160 (3%)
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+R+M G +G + Y+ +V A + G + A + + G V L C
Sbjct: 116 YRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCR 175
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
+A V EK+ +P +T++ LI + G +++ + Q M + C+P+
Sbjct: 176 RDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 235
Query: 491 TVNAMLKVYSRNDMFSKAKELFEE-TTRA---NSSGYTFL 526
T ++K M KA ++ +E T+A N YT L
Sbjct: 236 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275
>gi|212275340|ref|NP_001130930.1| uncharacterized protein LOC100192035 [Zea mays]
gi|195614146|gb|ACG28903.1| hypothetical protein [Zea mays]
gi|219885707|gb|ACL53228.1| unknown [Zea mays]
gi|413935208|gb|AFW69759.1| hypothetical protein ZEAMMB73_548432 [Zea mays]
Length = 748
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 172/417 (41%), Gaps = 57/417 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L++ G+A P EA+++F +M P+I + A++ V L ++ R R+
Sbjct: 179 LISAYGRAAIPQEAVKLFRMM-------PNIGVPRT-ALSYNAV-----LKAILCRGREA 225
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
++RI N + + PD+ YN ++ + + VF ++ G+ P TY
Sbjct: 226 MARRIYNAMIADG---VAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVTTYN 282
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +++G + + F +MA G +++Y V+++ + E ++ EAVA M ++
Sbjct: 283 TLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEK 342
Query: 414 GVVGTASVYYELACCLCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
G+ + + L LC++ GR +A V+ + R + + F L+ + G +D
Sbjct: 343 GLRLSEKTFAALMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLD 402
Query: 473 DCISI------FQHM----------------KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
+ + F+H+ CE I ++ +++ + + S
Sbjct: 403 GALEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGKCETAIEVLDELME---KGTLLSPKSP 459
Query: 511 LFEETTRANSSGYTFLSGDGAPLKP-------------DEYTYSSMLEASATAHQWEYFE 557
+ E + A + FL +G+ K D+ ++S++ A E +
Sbjct: 460 VLEAS--AYNPVIEFLCSNGSTAKAETFFRQLMKKGVDDKAAFNSLIRGHAKEGVPEAAQ 517
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ M D HA L+ + + + A DS+++ G +P P F ++
Sbjct: 518 EILAIMTRREVPTDPESHALLVDSFLKKNEPADAKTALDSMMQQGHLPSPALFKSVM 574
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 121/300 (40%), Gaps = 25/300 (8%)
Query: 286 LIERMRQKP-SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK-QLRKS 343
++ +R++P + R++N R P L+ LV + V++ + + F+ R+
Sbjct: 75 VLHMIRRRPWTTRLENSIRL-LSPTLDAPLV--HGVISGAASAGRADLALQFFRFAYRRG 131
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHE---FFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
G P AT+ L + + + + L H M A T L+ A+
Sbjct: 132 GFSPEGATFALLVPAL--ASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIP 189
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
EAV R M GV TA Y + + GR A + + + P T+
Sbjct: 190 QEAVKLFRMMPNIGVPRTALSYNAVLKAILCRGREAMARRIYNAMIA-DGVAPDVSTYNT 248
Query: 461 LIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
LI ++ + +F MK H P++ T N +L + R A+++F+E
Sbjct: 249 LIWGFGLCKKMETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDE----- 303
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++G+G + + +Y+ M++ ++ E ++ MA G +L + A L+
Sbjct: 304 ------MAGEGT--ERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALM 355
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 25/216 (11%)
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIG------TVN 493
LV++ + S + P E T LI + + + +F+ M PNIG + N
Sbjct: 159 LVLDTMPSFSVA-PDEPTLAALISAYGRAAIPQEAVKLFRMM-----PNIGVPRTALSYN 212
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A+LK + + +E Y + DG + PD TY++++ +
Sbjct: 213 AVLKA-----ILCRGREAMARRI------YNAMIADG--VAPDVSTYNTLIWGFGLCKKM 259
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
E V+ M G D T + LL RAG FD + G + + + M
Sbjct: 260 ETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVM 319
Query: 614 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 649
+ + + E+AVAL MA ++E+ + L
Sbjct: 320 IKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALM 355
>gi|449018641|dbj|BAM82043.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 805
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 143/364 (39%), Gaps = 38/364 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ LG G+ QA ++ + + + F ++ L L +A+R+F ++
Sbjct: 403 LISCLGKCGASAQA---IEMFHKMIRNGVAPNAFTFSALFGALTDGAFFDQAMRLFQMIR 459
Query: 256 EDCNLYPD---IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
YP+ + Y++V +G+ G + + L+ +M Q +N ++P
Sbjct: 460 AS---YPNELNVVVYNAVLKYVGRAGRIDAALDLLGQMEQN----------RN----VQP 502
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+V Y +L+ C + V ++RK G++P+ Y ++ ++G D F
Sbjct: 503 DIVTYGTILDICAKKQDVSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGLPDQAESLF 562
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R++ G L+ AF + A A M GV G + L
Sbjct: 563 RQLRAEGLEYDLFICNALLGAFARAKMVERAFQAFEEMRSAGVRGDRITFNTLITAAARA 622
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 491
+ A E +K S T+ LI + G + ++F M+ H +P I T
Sbjct: 623 REFDKAWKAFETMKKSNISAD-ATTYNALIDACSKSGMTELAFALFNEMRQAHLQPTIFT 681
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
NA++ ++ +A ++ + G G + PD +T + +L A A
Sbjct: 682 FNALIGACTKLQDMRRATQVL-----------MLMHGFG--VYPDTFTLNILLTACARNE 728
Query: 552 QWEY 555
++Y
Sbjct: 729 DFDY 732
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 142/356 (39%), Gaps = 19/356 (5%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ L + +A+ + M ++G+ L L D + QAM + +
Sbjct: 402 ILISCLGKCGASAQAIEMFHKMIRNGVAPNAFTFSALFGALTDGAFFDQAMRLFQMIRA- 460
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + VY +L +G+AGR AL + M ++ N+ PDI Y ++ +
Sbjct: 461 -SYPNELNVVVYNAVLKYVGRAGRIDAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQD 519
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ +++RMR++ + P+ Y ++++AC + +F+Q
Sbjct: 520 VSLAYAVLDRMRKRG---------------MRPNNFCYASLIDACARAGLPDQAESLFRQ 564
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
LR GL+ + ++ + + F +M +G +T+ L+ A +
Sbjct: 565 LRAEGLEYDLFICNALLGAFARAKMVERAFQAFEEMRSAGVRGDRITFNTLITAAARARE 624
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
++A A M++ + A+ Y L +G + A + +++ H +P TF
Sbjct: 625 FDKAWKAFETMKKSNISADATTYNALIDACSKSGMTELAFALFNEMRQA-HLQPTIFTFN 683
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
LI + + + M P+ T+N +L +RN+ F A L E
Sbjct: 684 ALIGACTKLQDMRRATQVLMLMHGFGVYPDTFTLNILLTACARNEDFDYAISLVRE 739
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 111/274 (40%), Gaps = 16/274 (5%)
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEA-IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + +SG+ R + + G I +Y +L+ + G +A+ M + G
Sbjct: 368 LSALYKSGRAADALSLCRIVEREGHIEIDVASYSILISCLGKCGASAQAIEMFHKMIRNG 427
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
V A + L L + + AM + + I++ ++ + + ++ G ID
Sbjct: 428 VAPNAFTFSALFGALTDGAFFDQAMRLFQMIRASYPNELNVVVYNAVLKYVGRAGRIDAA 487
Query: 475 ISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ + M+ + +P+I T +L + ++ S A + + R G
Sbjct: 488 LDLLGQMEQNRNVQPDIVTYGTILDICAKKQDVSLAYAVLD---RMRKRG---------- 534
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
++P+ + Y+S+++A A A + E +++ + G + D LL +RA
Sbjct: 535 MRPNNFCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAF 594
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
AF+ + AG + F ++ A ++KA
Sbjct: 595 QAFEEMRSAGVRGDRITFNTLITAAARAREFDKA 628
>gi|255661024|gb|ACU25681.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 376
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 16/282 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYN +LN S + K F ++ + + G + + A++ + M + +GK D
Sbjct: 21 VSPDAVVYNTMLNGFFRSQRIKDCFELWDLMGREGSR-TVASFNIIMRGLFDNGKVDEAV 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG + TY +LV F + G N+++ + EQ+G V A Y + L
Sbjct: 80 SIWELMKESGFVEDSTTYGILVHGFCKNGHNNKSLHVLEIAEQKGGVLDAFAYSAMINGL 139
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C + A+ V+ + + KP + LI + +D I FQ M + C P
Sbjct: 140 CKEAKLDKAISVLNSMTN-NGCKPNAHVYNSLINGLVGASKYEDAICAFQEMGNMDCSPT 198
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I T N ++ + + +++A +L ++ P TYSS+ +
Sbjct: 199 IVTYNXLINGLCKGERYAEAYDLVKQMLEKG-------------FNPSVITYSSLFKGLC 245
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ E ++K + G + D H L+ GK L
Sbjct: 246 QGRKVEMALQLWKKVISKGFKPDVQMHNILIHGLCNVGKIEL 287
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/303 (18%), Positives = 129/303 (42%), Gaps = 21/303 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL D G +A+S+ + +K+ ++ Y L+ K G +++L + +
Sbjct: 65 IMRGLFDNGKVDEAVSIWEL---MKESGFVEDSTTYGILVHGFCKNGHNNKSLHVLEIAE 121
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + D AY ++ L + L + + ++ M K P+
Sbjct: 122 QKGGVL-DAFAYSAMINGLCKEAKLDKAISVLNSMTNNGCK---------------PNAH 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN+++N V + +++ F+++ P+ TY + + + +Y ++ ++M
Sbjct: 166 VYNSLINGLVGASKYEDAICAFQEMGNMDCSPTIVTYNXLINGLCKGERYAEAYDLVKQM 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +TY L + + K+ A+ + + +G ++ L LCN G+
Sbjct: 226 LEKGFNPSVITYSSLFKGLCQGRKVEMALQLWKKVISKGFKPDVQMHNILIHGLCNVGKI 285
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNA 494
+ A+ + + + S P +T L+ G + + I+ +++ +P+I + N
Sbjct: 286 ELALALYFGMNRWKCS-PNLVTLNTLMEGFYKDGDVRSGLVIWARILRNELKPDIISYNI 344
Query: 495 MLK 497
LK
Sbjct: 345 TLK 347
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 179/440 (40%), Gaps = 85/440 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G+ G +A+ + V +KDK + F YT L+ A R EA +F M
Sbjct: 220 LIHGVCKVGVVDEALRL---VRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETM- 275
Query: 256 EDCNLYPDIAAY----HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+D +YP+ A H V + L+ L + ++R +++ +R+ M D VL
Sbjct: 276 KDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQ--ERVHFMLA--CDTVLY 331
Query: 312 -------------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
P V+N V+ V + + VF+ LRK G+K
Sbjct: 332 CLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVK 391
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
Y +EV+ ++ + + ++ G +Y +++ F ++ A A
Sbjct: 392 AGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEA 451
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNG------RWQDAML-------------VVEKIKS 447
R+M+ RGVV + L C +G + +++L +V+ +
Sbjct: 452 FRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQ 511
Query: 448 LRHSK---------------PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 491
++ ++ P + + LI S G + + + + M K+ P+ +
Sbjct: 512 IKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYS 571
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
NA+++++ R + KAK+LF+ +R+ L PD YTYS+ +EA + +
Sbjct: 572 YNALIQIFCRMNKVEKAKKLFDSMSRSG-------------LNPDNYTYSAFIEALSESG 618
Query: 552 QWEYFEYVYKGMALSGCQLD 571
+ E + ++ M +GC D
Sbjct: 619 RLEEAKKMFYSMEANGCSPD 638
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 135/324 (41%), Gaps = 39/324 (12%)
Query: 108 LKRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRV------L 161
+K LRE ++FE + V+ G + +E + WR E + + L
Sbjct: 370 VKGAELRETCDVFE----ILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGL 425
Query: 162 VDRLSEREMTAKNWKFVRIMNQSGLMFTEGQML----------KLLKGLGDKGSWRQAMS 211
+ + M + ++M+ + F + Q+ L+ G G+ +A
Sbjct: 426 ISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARK 485
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+L+ + K D+ F ++ ++ L + R EAL F M+E + P+ Y+ +
Sbjct: 486 LLESLLENGLKPDI---FTFSSIVDGLCQIKRTEEALECFTEMIE-WGINPNAVIYNILI 541
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
+L +G + VKL+ RM+++ + PD YNA++ ++ +
Sbjct: 542 RSLCTIGDVARSVKLLRRMQKEG---------------ISPDTYSYNALIQIFCRMNKVE 586
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
+F + +SGL P TY +E + +SG+ + + F M +G + + +++
Sbjct: 587 KAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLII 646
Query: 392 RAFWEEGKINEAVAAVRNMEQRGV 415
+ ++ + EA + Q+G+
Sbjct: 647 KILVQQEYVEEAQNIIERCRQKGI 670
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 124/345 (35%), Gaps = 53/345 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P +YNA+++A V S+ + F+Q+ TY + + + G D
Sbjct: 175 LSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEAL 234
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS--------- 420
R+M G TY +L+ F +++EA M+ GV +
Sbjct: 235 RLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGV 294
Query: 421 -------------------------VYYELAC-----CLCNNGRWQDAMLVVEKIKSLRH 450
V++ LAC CL NN ++ ++ + ++
Sbjct: 295 FRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGG 354
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 509
P F ++ + G + + +F+ + K + IG A+++V +N
Sbjct: 355 YFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKN------- 407
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
E EE R Y L DG L + ++Y+ ++ A + ++ M + G
Sbjct: 408 EWREEGDRV----YGQLISDG--LISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVV 461
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ L+ + G +SLLE G P F+ ++
Sbjct: 462 PNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIV 506
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 107/260 (41%), Gaps = 21/260 (8%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG-LKDKRDLKSRFVYTKLLAIL 238
I+ + G+ G L L++ L K WR+ D VYG L + + F Y ++
Sbjct: 384 ILRKQGVKAGIGAYLALIEVLY-KNEWREEG---DRVYGQLISDGLISNVFSYNMIINCF 439
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
+A A F M + + P++ ++++ + G + + KL+E + +
Sbjct: 440 CRAKLMDNASEAFRDM-QVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENG---- 494
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
L+PD+ ++++++ + + F ++ + G+ P+A Y + +
Sbjct: 495 -----------LKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRS 543
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+ G + R+M K G + +Y L++ F K+ +A +M + G+
Sbjct: 544 LCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPD 603
Query: 419 ASVYYELACCLCNNGRWQDA 438
Y L +GR ++A
Sbjct: 604 NYTYSAFIEALSESGRLEEA 623
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 145/357 (40%), Gaps = 40/357 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDC----NLYPDIAAYHSVAVTLGQVGLLKELVKL 286
YT ++ +G+P EA+ + D L PDIA Y ++ G L + L
Sbjct: 269 YTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHAL 328
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++ M ++N + PD VYN ++ A + VF ++R+ GL
Sbjct: 329 LDLM-------VRNG--------IHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLN 373
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P A TYG + ++ +SG+ + +F +M G + G + Y L+ K A
Sbjct: 374 PDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 433
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEITFTGLII 463
+ M RG+ + + C GR ++ EK+ L KP IT++ LI
Sbjct: 434 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIITYSTLID 489
Query: 464 SSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
G +D+ + + M +PN T ++ Y + A LF+E SSG
Sbjct: 490 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEM---ESSG 546
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ PD TY+ +L+ + + +Y + SG Q++ + + +L
Sbjct: 547 ----------VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 593
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 184/473 (38%), Gaps = 83/473 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL AM ++ + + + + F T LL L R EAL + ++M
Sbjct: 128 LLKGLCADKRTSDAMDIV--LRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMA 185
Query: 256 ED--CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ PD+ +Y +V G KE S + + + + D + PD
Sbjct: 186 DGRGGGSAPDVVSYTTVIN-----GFFKE----------GDSGKAYSTYHEMLDRRISPD 230
Query: 314 LVVYNAVL---------------------NACVP--------------SHQWKGVFWVFK 338
+V Y++++ N +P S Q K K
Sbjct: 231 VVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLK 290
Query: 339 QLRK-----SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
++R GL+P ATY ++ G +H M ++G Y +L+ A
Sbjct: 291 KVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICA 350
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ ++GK++EA+ M Q+G+ A Y + LC +GR +DAML E++ S P
Sbjct: 351 YAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS-P 409
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKEL 511
I + LI + + M D C I N+++ + + ++++L
Sbjct: 410 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI-FFNSIIDSHCKEGRVIESEKL 468
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F+ R +KPD TYS++++ A + + + GM G + +
Sbjct: 469 FDLMVRIG-------------VKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN 515
Query: 572 QTKHAWLL---VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 621
+ L+ + SR G +L F + +G P + + +++Q + Q+
Sbjct: 516 TVTYRTLINGYCKISRMGDALVL---FKEMESSGVSPDIITY-NIILQGLFQT 564
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 173/421 (41%), Gaps = 55/421 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+G KG+ ++LD + D +VY L+ K G+ EA+ +F+ M
Sbjct: 312 LLQGYATKGALVGMHALLDLMVRNGIHPD---HYVYNILICAYAKQGKVDEAMLVFSKMR 368
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN--MHR----KNW 306
+ L PD Y +V L + G +++ + E+M + P + N +H W
Sbjct: 369 QQ-GLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 427
Query: 307 D-------PVLEPDLVVYNAVLNACVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLA 355
+ +L+ + + N+ + SH +G +F + + G+KP TY
Sbjct: 428 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 487
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ +GK D + M G +TY+ L+ + + ++ +A+ + ME GV
Sbjct: 488 IDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGV 547
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI-DDC 474
Y + L R A + +I +E++ +I+ + + DD
Sbjct: 548 SPDIITYNIILQGLFQTRRTAAAKELYVRIT--ESGTQIELSTYNIILHGLCKNKLTDDA 605
Query: 475 ISIFQHMKDHCEPNIG--------TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
+ +FQ++ C ++ ++A+LKV RN +AK+LF
Sbjct: 606 LRMFQNL---CLMDLKLEARTFNIMIDALLKV-GRN---GEAKDLF-----------VAF 647
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
S +G L P+ +TY M E E + ++ M +GC +D +++ E + G
Sbjct: 648 SSNG--LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 705
Query: 587 K 587
+
Sbjct: 706 E 706
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/424 (18%), Positives = 158/424 (37%), Gaps = 35/424 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+T LL L R +A+ I + + + PD+ + T+ LLK L +
Sbjct: 123 ITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDV-----FSCTI----LLK---GLCD 170
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R + + + +M PD+V Y V+N + + ++ + P
Sbjct: 171 ENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPD 230
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + + D E M K+G TY ++ + G+ EA+ ++
Sbjct: 231 VVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLK 290
Query: 409 NMEQRGVVGTASVYYELA--CCLCNNGRWQDAMLVVEKIKSL---RHSKPLEITFTGLII 463
+ G V + ++A C L + A++ + + L P + LI
Sbjct: 291 KVRSDG-VEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILIC 349
Query: 464 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ G +D+ + +F M+ P+ T A++ + ++ A FE+
Sbjct: 350 AYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG--- 406
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
L P Y+S++ T ++WE E + M G L+ ++
Sbjct: 407 ----------LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 456
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFH 639
+ G+ E FD ++ G P + ++ ++ + ++A+ L++ M P
Sbjct: 457 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 516
Query: 640 ITER 643
+T R
Sbjct: 517 VTYR 520
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/324 (18%), Positives = 120/324 (37%), Gaps = 34/324 (10%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TY + + ++ + DL + K G
Sbjct: 60 VARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFR 119
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+T+ L++ + + ++A+ V R M + + L LC+ R Q+A+
Sbjct: 120 VEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 179
Query: 441 VVEKIKSLR--HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK 497
+ + R S P +++T +I G S + M D P++ T ++++
Sbjct: 180 LPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIA 239
Query: 498 VYSRNDMFSKAKELFEETTR----ANSSGYTFL----SGDGAP----------------- 532
+ KA E+ + N YT + G P
Sbjct: 240 ALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEP 299
Query: 533 --LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
L+PD TY ++L+ AT + M +G D + L+ ++ GK
Sbjct: 300 DGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDE 359
Query: 591 LEHAFDSLLEAGEIPHPLFFTEML 614
F + + G P + + ++
Sbjct: 360 AMLVFSKMRQQGLNPDAVTYGAVI 383
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/341 (19%), Positives = 141/341 (41%), Gaps = 15/341 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD + + +++ ++ + ++ + G +P+ TYG+ + + + G DL
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM + + Y ++ + + ++A+ ME +GV Y L CLCN
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
RW DA ++ + R P +TF LI + + G + + ++ M K +P+I
Sbjct: 308 YERWSDASRLLSDMIE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T ++++ + +D +AK +FE +S D P+ TY++++ A
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFE----------LMISKD---CFPNVVTYNTLINGFCKA 413
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ + +++ M+ G + + L+ +A C + F ++ G P+ + +
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 651
+L EKA+ + + + T + + E
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 175/467 (37%), Gaps = 75/467 (16%)
Query: 143 VEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKG 199
V+ E +R + L+ L ++ V M Q G + T G ++ G
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV---VVNG 234
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L +G A ++L+ + K + ++ +Y+ ++ L K +AL +F M E+
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANV---VIYSTVIDSLCKYRHEDDALNLFTEM-ENKG 290
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
+ P++ Y S+ L + +L+ M + RK + P++V +NA
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDM----------IERK-----INPNVVTFNA 335
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++A V + ++ ++ K + P TY + + D F M
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+TY L+ F + +I+E V R M QRG+VG
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT-------------------- 435
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 498
+T+T LI D+ +F+ M D PNI T N +L
Sbjct: 436 ----------------VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+N KA +FE R+ ++P YTY+ M+E A + E
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSK-------------MEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
++ ++L G + D + ++ R G + F + E G +P
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 24/260 (9%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y +L + S + +F + KS PS + + + + K+DLV KM
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ G + TY +L+ F +I+ A+A + M + G + L C+ R
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT---- 491
DA+ +V+++ + + +P ITFT LI + +++ M + C+PN+ T
Sbjct: 173 DAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYT------------------FLSGDGAPL 533
VN + K + F+ ++ AN Y+ F + +
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 534 KPDEYTYSSMLEASATAHQW 553
+P+ TYSS++ +W
Sbjct: 292 RPNVITYSSLISCLCNYERW 311
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 39/321 (12%)
Query: 233 KLLAILGK----AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
K LAIL + G+PH A+R F L + + L+ D+ ++++ LL L K
Sbjct: 137 KTLAILAERYASIGKPHRAVRTF-LSMHEHGLHQDLHSFNT---------LLDILCK--- 183
Query: 289 RMRQKPSKRIKNMHR--KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
S R++ H + PD V YN + N + V K++ + G++
Sbjct: 184 ------SNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIE 237
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ +S + EF+ +M K I ++Y ++ F E G++ +A
Sbjct: 238 PTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRV 297
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
M + GV + Y L C Q+A+ V E++ P +TF +I
Sbjct: 298 FDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLC 357
Query: 467 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G ++ + + M +H ++ T N +++ + K E+F +
Sbjct: 358 HVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKM---------- 407
Query: 526 LSGDGAPLKPDEYTYSSMLEA 546
GDG L P+ TY+ ++ A
Sbjct: 408 --GDGLCL-PNLDTYNVLISA 425
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 116/273 (42%), Gaps = 31/273 (11%)
Query: 150 RWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSW 206
R+R + + +L + ++ T + ++ M Q G+ M T MLK G +
Sbjct: 200 RFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLK--------GYF 251
Query: 207 RQAMSVLDWVYGLK-DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
R W + L+ KR + V YT ++ G+AG +A R+F+ M+++ + P++
Sbjct: 252 RSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKE-GVAPNV 310
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
A Y+++ + ++ V + E M + + V P++V +N V+
Sbjct: 311 ATYNALIQVFCKKDSVQNAVAVFEEMVR--------------EGVCSPNVVTFNVVIRGL 356
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ +++ + GL+ S TY + + +G+ + E F KM
Sbjct: 357 CHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNL 416
Query: 385 LTYKVLVRAFWEEGKINEAVAA---VRNMEQRG 414
TY VL+ A + K + V A + M +RG
Sbjct: 417 DTYNVLISAMFVRKKSEDLVVAGKLLMEMVERG 449
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 162/407 (39%), Gaps = 27/407 (6%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMN 182
LN +++ LG F+ V K ++ + L+ L + K+ F +
Sbjct: 48 LNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVV 107
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG 242
G + LL GL G R A+ +L + +D+ + +Y ++ L K
Sbjct: 108 AQGFQMDQVSYATLLNGLCKIGETRSALKLLRMI---EDRSTRPNVVMYNTIIDGLCKDK 164
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM------------ 290
+EA +++ M + ++P++ Y ++ G L E L+ M
Sbjct: 165 LVNEAYDLYSEM-DARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTY 223
Query: 291 --------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
++ K KN+ ++P++V YN +++ + + +F + +
Sbjct: 224 TILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQ 283
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
G+ P+ +Y + ++ + +S + D R++ +TY L+ F + G+I
Sbjct: 284 KGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITS 343
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
A+ ++ M RG Y L LC N A + K+K R +P + T+T LI
Sbjct: 344 ALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE-RGIQPNKYTYTALI 402
Query: 463 ISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKA 508
GG + +FQH + C N+ T N M+ + M +A
Sbjct: 403 DGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEA 449
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 20/196 (10%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y ++ L K+ R EA+ + +L N+ P+ Y S+ ++G + + L++
Sbjct: 291 YSYNIMIDRLCKSKRVDEAMNLLREVLHK-NMVPNTVTYSSLIDGFCKLGRITSALDLLK 349
Query: 289 RM--RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
M R +P+ D+V Y ++L+A + +F ++++ G++
Sbjct: 350 EMYHRGQPA-----------------DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 392
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ TY ++ + + G++ + F+ + G I TY V++ +EG ++EA+A
Sbjct: 393 PNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAM 452
Query: 407 VRNMEQRGVVGTASVY 422
ME+ G + A +
Sbjct: 453 KSKMEENGCIPDAVTF 468
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 150/387 (38%), Gaps = 40/387 (10%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D V Y +LN + + + + + +P+ Y ++ + + + ++ +
Sbjct: 114 DQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLY 173
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M G +TY L+ F G++ EA + M + + Y L LC
Sbjct: 174 SEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKE 233
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHM-KDHCEP 487
G+ ++A ++ + + KP +++ L MDG G + + +F M + P
Sbjct: 234 GKVKEAKNLLA-VMTKEGVKPNVVSYNTL----MDGYCLIGEVQNAKQMFHTMVQKGVNP 288
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANS-----------SGYTFLSGDGAPL--- 533
N+ + N M+ ++ +A L E N G+ L + L
Sbjct: 289 NVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348
Query: 534 -------KP-DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+P D TY+S+L+A + ++ M G Q ++ + L+ +
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG 408
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHIT- 641
G+ + F LL G + + M+ + ++A+A+ + M P +T
Sbjct: 409 GRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTF 468
Query: 642 ERQWTELFESNEDRISRDKLEKLLNAL 668
E LFE +++ DK EKLL+ +
Sbjct: 469 EIIIRSLFEKDQN----DKAEKLLHEM 491
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 64/388 (16%), Positives = 146/388 (37%), Gaps = 35/388 (9%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P+ + N ++ + K ++ G + +Y + + + G+ +
Sbjct: 77 QPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALK 136
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
R + + Y ++ ++ +NEA M+ RG+ Y L C
Sbjct: 137 LLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFC 196
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
G+ +A ++ ++ L++ P T+T L+ + G + + ++ M K+ +PN+
Sbjct: 197 LAGQLMEAFGLLNEM-ILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNV 255
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+ N ++ Y AK++F + + P+ Y+Y+ M++
Sbjct: 256 VSYNTLMDGYCLIGEVQNAKQMFHTMVQKG-------------VNPNVYSYNIMIDRLCK 302
Query: 550 AHQWE-----YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA--- 601
+ + + E ++K M + ++ L+ + G+ + A D L E
Sbjct: 303 SKRVDEAMNLLREVLHKNMV-----PNTVTYSSLIDGFCKLGR---ITSALDLLKEMYHR 354
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE----SNEDRIS 657
G+ + +T +L N +KA AL M + +T L + + +
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNA 414
Query: 658 RDKLEKLLNALCNCNAASSEITVSNLSR 685
+ + LL C N + + +S L +
Sbjct: 415 QKLFQHLLVKGCRINVWTYNVMISGLCK 442
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 159/382 (41%), Gaps = 74/382 (19%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T +L L KGSW ++W + Y LL L GR +A+
Sbjct: 22 TNAGLLDAAANLLTKGSWFGCR--IEW-------------YAYNNLLNTLIAHGRAQDAV 66
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKN----- 300
+F ++D PD+ +++ V + +VG L++ ++L+ERM + P +N
Sbjct: 67 ALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDG 126
Query: 301 -------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ R D V P++V Y +V++ + + K F V+ + +SG +P
Sbjct: 127 LCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRP 186
Query: 348 SAATYGLAM-----------------EVMLQSGKYDLV--HEFFRKMAKSGEAIGAL--- 385
+ TY + + +++L S D+V + + G+ A+
Sbjct: 187 NTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIW 246
Query: 386 -------------TYKVLVRAFWEEGKINEAVAAVRNMEQRG-VVGTASVYYELACCLCN 431
T+ +++ + + + EA++ +R + R +V +Y + LC
Sbjct: 247 MEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCK 306
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
G+ +A L+V ++ + P + T+T LII G I + +++F M + C P+
Sbjct: 307 GGKVDEANLIVTDMEE-KGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNI 365
Query: 491 TVNAMLKVYSRNDMFSKAKELF 512
T+N+ + + M ++ ++
Sbjct: 366 TINSFISCVLKAGMPNEVHQIM 387
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 106/258 (41%), Gaps = 23/258 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGL-MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
+LVD L + K + +R + + G+ M ++ G G + A SV +
Sbjct: 122 ILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYN---D 178
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + Y L+ GKA A+R++ L+L C PD+ ++S+ +
Sbjct: 179 MLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCP--PDVVTFNSLIDGYCRC 236
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G L + +++ M Q ++P++ ++ ++++ ++ +
Sbjct: 237 GQLDDAMRIWMEMGQHH---------------IQPNVYTFSIIIHSLCTQNRSAEALSLL 281
Query: 338 KQLR-KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
++L ++ + P Y ++++ + GK D + M + G TY +L+
Sbjct: 282 RELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCM 341
Query: 397 EGKINEAVAAVRNMEQRG 414
+G+I EAV M + G
Sbjct: 342 KGRIPEAVTLFHKMVETG 359
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 135/307 (43%), Gaps = 22/307 (7%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL-IE 288
V ++LL L A R EA I L + + PD+ AY++V + G +++ L +E
Sbjct: 127 VISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLE 186
Query: 289 RMRQ-------------------KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
M Q + R K + ++ D ++PD YN +++ + + +
Sbjct: 187 MMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGK 246
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
WK V + +++ GL+P TY L ++ + ++G+ FF M + G Y +
Sbjct: 247 WKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAI 306
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ + +G ++E + + M GV ++ + C ++AM + K++ +
Sbjct: 307 LLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQ-Q 365
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 508
P ++F LI + G +DD + F M + PNI ++++ + KA
Sbjct: 366 GLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKA 425
Query: 509 KELFEET 515
+ELF E
Sbjct: 426 EELFFEV 432
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 137/361 (37%), Gaps = 24/361 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+V YN V+N Q + + +F ++ G+ P+ TY ++ + ++ D
Sbjct: 159 PDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGV 218
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F++M G TY L+ + GK E V + M G+ Y L LC
Sbjct: 219 FQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCK 278
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
NGR ++A L + + + KP + L+ G + + S M + PN
Sbjct: 279 NGRCREARLFFDSMFR-KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRR 337
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG------------DGAPLK---- 534
N M Y++ M +A +F + + S G D A L+
Sbjct: 338 IFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQM 397
Query: 535 ------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
P+ + +SS++ T +WE E ++ + G +D L+ G+
Sbjct: 398 INEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRV 457
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
+ D ++ G P+ + + ++ + ++A L++ M E +T L
Sbjct: 458 MEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTIL 517
Query: 649 F 649
Sbjct: 518 L 518
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 141/357 (39%), Gaps = 25/357 (7%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YG 218
++D L + ++ + + M G+ G L+ G G W++ + +L+ + +G
Sbjct: 202 VIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHG 261
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
L+ Y LL L K GR EA F+ M + PD+A Y + G
Sbjct: 262 LE-----PDCITYALLLDYLCKNGRCREARLFFDSMFRK-GIKPDVAIYAILLHGYATKG 315
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L E+ ++ M + P+ ++N + A + +F
Sbjct: 316 ALSEMHSFLDLMVGNG---------------VSPNRRIFNIMFCAYAKKAMIEEAMHIFN 360
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
++R+ GL P ++G ++ + + G+ D F +M G + LV G
Sbjct: 361 KMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVG 420
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
K +A + +G+ A + L C LCN GR +A +++ + + +P I++
Sbjct: 421 KWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRV-GVRPNVISY 479
Query: 459 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
L+ G ID+ + M + +PN T +L+ Y + A LF E
Sbjct: 480 NTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFRE 536
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 25/271 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ G G +A +LD + GLK + F YT LL KA R +A +F
Sbjct: 482 LVAGHCLTGRIDEAAKLLDVMVSNGLK-----PNEFTYTILLRGYCKARRVDDAYSLFRE 536
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
ML + P +A Y+++ L Q G E +L M +K D
Sbjct: 537 MLMK-GVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTK---------------CD 580
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ YN +LN ++ F +F++L + + T+ + + +L+ G+ + + F
Sbjct: 581 IYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFA 640
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
++ G +TY+++ EEG + E ME+ G + + L L + G
Sbjct: 641 TISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRG 700
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
A + + K+ S LE + T ++IS
Sbjct: 701 DISRAGVYLYKLDEKNFS--LEASTTSMLIS 729
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 118/299 (39%), Gaps = 28/299 (9%)
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
S + P+A TY + + + G+ + F + K+G + + L++ + +++E
Sbjct: 84 SKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDE 143
Query: 403 AV-AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL------RHSKPLE 455
A + M + G Y + NG +++ VEK +L + P
Sbjct: 144 ATDILLLRMSEFGCPPDVVAYNTVI-----NGFFREGQ--VEKAYNLFLEMMDQGIPPNV 196
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+T+T +I +D +FQ M D +P+ GT N ++ Y + + ++ EE
Sbjct: 197 VTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEE 256
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+S G L+PD TY+ +L+ + + M G + D
Sbjct: 257 -----------MSTHG--LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAI 303
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+A LL + G + D ++ G P+ F M ++ E+A+ + N M
Sbjct: 304 YAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM 362
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 150/363 (41%), Gaps = 56/363 (15%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + +W + M + G+ L++ D G W++A ++ + L
Sbjct: 163 LLLDAYARAGRLEDSWWVLGEMKRRGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQEL 222
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ D+K +Y L+ GK G+ +A R+F M + + PDIA ++++ +VG
Sbjct: 223 GVELDVK---IYNGLIDTFGKYGQLADARRLFEKMRAE-GIKPDIATWNALIRWHCRVGN 278
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+K ++ M+++ + PD ++ ++++ +W + +F +
Sbjct: 279 MKRALRFFAAMQEEG---------------MYPDPKIFMSIISRLGEQGKWDELKKLFDK 323
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+R GLK S A Y + +++ Q G++ HE + + + VL A+ ++G
Sbjct: 324 MRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFCVLANAYAQQGL 383
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ V ++ ME G+ +P +
Sbjct: 384 CEQTVNVLQLMEAEGI------------------------------------EPNLVMLN 407
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI + G + +++FQH+KD P++ T ++K + R F K E++ E RA
Sbjct: 408 LLINAFSTAGRHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERA 467
Query: 519 NSS 521
+
Sbjct: 468 GCT 470
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 142/349 (40%), Gaps = 33/349 (9%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
++R Y LL +AGR ++ + M + + D A Y ++ G+ K+
Sbjct: 156 RNRRTYMLLLDAYARAGRLEDSWWVLGEM-KRRGIQLDTAGYSTLVRLYRDNGMWKKATD 214
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
LI M++ +E D+ +YN +++ Q +F+++R G+
Sbjct: 215 LIMEMQELG---------------VELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGI 259
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
KP AT+ + + G FF M + G + ++ E+GK +E
Sbjct: 260 KPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKK 319
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIIS 464
M RG+ + +VY L GR++DA V +K+ H P F L +
Sbjct: 320 LFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSP--SIFCVLANA 377
Query: 465 SMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
G + +++ Q M+ + EPN+ +N ++ +S +A +F+ SG
Sbjct: 378 YAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQHI---KDSG- 433
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
+ PD TY+++++ ++E VY M +GC D+
Sbjct: 434 ---------MSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPDR 473
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 2/204 (0%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P Y ++ A + + + ++R GL+P AA Y +E +L L
Sbjct: 84 MRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLCLAD 143
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+MA G A TY +L+ A+ G++ ++ + M++RG+ + Y L
Sbjct: 144 RLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTAGYSTLVRLY 203
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
+NG W+ A ++ +++ L ++I + GLI + G + D +F+ M+ + +P+
Sbjct: 204 RDNGMWKKATDLIMEMQELGVELDVKI-YNGLIDTFGKYGQLADARRLFEKMRAEGIKPD 262
Query: 489 IGTVNAMLKVYSRNDMFSKAKELF 512
I T NA+++ + R +A F
Sbjct: 263 IATWNALIRWHCRVGNMKRALRFF 286
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 155/392 (39%), Gaps = 36/392 (9%)
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP----SHQWKGVFWVFKQLRKSGLKPSA 349
P + + HR D + + +N+VLN + S+ +K VF K G +P+
Sbjct: 140 PGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSK-GFQPNL 198
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY L ++ + + G+ D + FR+M TY L+ +E +++EAV +
Sbjct: 199 LTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDE 258
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M+ G + + L L NG A +V+ + L+ P E+T+ LI G
Sbjct: 259 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM-FLKGCVPNEVTYNTLIHGLCLKG 317
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+D +S+ + M C PN T ++ + RA + +S
Sbjct: 318 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ-------------RRAEDGVHILMSM 364
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ K +EY YSS++ + E ++K MA GC+ + + + R K
Sbjct: 365 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKP 424
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
E +L G +P+ ++ ++ + + +KA+ + W E+
Sbjct: 425 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILV---------------WKEM 469
Query: 649 FESNEDRISRDKLEKLLNALCNCNAASSEITV 680
S + R + LLN LC +TV
Sbjct: 470 M-SQDMRHNVVCCSVLLNGLCESGRLREALTV 500
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 139/354 (39%), Gaps = 64/354 (18%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ + GKA P EA+ F+ M D + + +++SV + Q G K
Sbjct: 126 IFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLH 185
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ SK +P+L+ YN ++ A Q F+++ P
Sbjct: 186 VFGANSKG------------FQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDV 233
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY M + + + D +M G +T+ VL+ A + G ++ A V N
Sbjct: 234 FTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDN 293
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM--- 466
M +G V Y L LC G+ A+ ++EK+ S + P ++T+ G II+ +
Sbjct: 294 MFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK-CVPNQVTY-GTIINGLVKQ 351
Query: 467 ----DGGHI-----------------------------DDCISIFQHMKDH-CEPNIGTV 492
DG HI ++ + +++ M + C+PN+
Sbjct: 352 RRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVY 411
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
A + R++ +A+++ +E S G+ P+ +TYSS+++
Sbjct: 412 GAFIDGLCRDEKPDEAEDILQEML---SKGFL----------PNAFTYSSLMKG 452
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 152/351 (43%), Gaps = 50/351 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLM 254
L+ GL + +A+ +LD ++ + L + + L+ L K G A ++ N+
Sbjct: 239 LMNGLCKERRVDEAVFLLDE---MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMF 295
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM------------H 302
L+ C P+ Y+++ L G L + + L+E+M SK + N
Sbjct: 296 LKGC--VPNEVTYNTLIHGLCLKGKLDKALSLLEKMVS--SKCVPNQVTYGTIINGLVKQ 351
Query: 303 RKNWDPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
R+ D V + + +Y+++++ + + ++K++ + G KP+ Y
Sbjct: 352 RRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVY 411
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
G ++ + + K D + ++M G A TY L++ F+++G +A+ + M
Sbjct: 412 GAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMS 471
Query: 413 RGVVGTASVYYELACC------LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ + + + CC LC +GR ++A+ V + KP + ++ +I
Sbjct: 472 Q------DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLG-EGLKPDVVAYSSMIKGLC 524
Query: 467 DGGHIDDCISIFQHMKDHCE-----PNIGTVNAMLKVYSRNDMFSKAKELF 512
D G +D + +F M+ C+ P++ T N + R D ++A +L
Sbjct: 525 DVGSVDKGLKLFYEMQ--CQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 573
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 94/460 (20%), Positives = 173/460 (37%), Gaps = 69/460 (15%)
Query: 133 QLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQ 192
+LG F + +E + R E I ++DR+ F+ I G G+
Sbjct: 86 KLGDATFYRLIENYATSR---EFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGE 142
Query: 193 MLKLLKGLGDKGSWRQAM----SVLDW----------------VYGLKDKRDLKSRFVYT 232
+ + + +Q + SVL+ V+G K + Y
Sbjct: 143 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYN 202
Query: 233 KLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
++ L K G+ A+ F M L++CN PD+ Y ++ L + + E V L++ M+
Sbjct: 203 LIIKALCKLGQIDRAVDTFREMPLKNCN--PDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ P+ V +N +++A + + + G P+ T
Sbjct: 261 AEGCL---------------PNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVT 305
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + + GK D KM S +TY ++ ++ + + V + +ME
Sbjct: 306 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSME 365
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+RG +Y L L G+ ++A+ + +++ + KP + + I
Sbjct: 366 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE-KGCKPNVVVYGAFIDGLCRDEKP 424
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRAN------- 519
D+ I Q M PN T ++++K + + KA KE+ + R N
Sbjct: 425 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 484
Query: 520 -----SSG--------YTFLSGDGAPLKPDEYTYSSMLEA 546
SG +T + G+G LKPD YSSM++
Sbjct: 485 LNGLCESGRLREALTVWTHMLGEG--LKPDVVAYSSMIKG 522
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 21/214 (9%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK + +D L E + ++ M G + L+KG KG +
Sbjct: 401 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 460
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTK-LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+A +L W + +D++ V LL L ++GR EAL ++ ML + L PD+ A
Sbjct: 461 KA--ILVWKEMMS--QDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGE-GLKPDVVA 515
Query: 267 YHSVAVTLGQVGLLKELVKLIERMR-QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y S+ L VG + + +KL M+ Q+P R PD+V YN + NA
Sbjct: 516 YSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSR--------------PDVVTYNILFNALC 561
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ + G P + T + +E +
Sbjct: 562 RQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 136/325 (41%), Gaps = 17/325 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD+ YN ++N + + + + + GL P+ +Y + ++G+Y E
Sbjct: 339 EPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASE 398
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+M++ G + + Y LV G+++ A+ M +RG++ A++Y L LC
Sbjct: 399 LLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLC 458
Query: 431 NNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ-HMKDHCEPN 488
GR+ A L+VE + ++ P L+ + G++D+ +FQ ++ + +
Sbjct: 459 KKGRFPAAKQLLVEMLD--QNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTS 516
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ NAM+K Y + M + A F+ S PDE+TYS++++
Sbjct: 517 VVECNAMIKGYCKYGMMNDALLCFKRMFNGVHS-------------PDEFTYSTIIDGYV 563
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ ++ M C+ + L+ R G + E F+ + G P+ +
Sbjct: 564 KQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVV 623
Query: 609 FFTEMLIQAIVQSNYEKAVALINAM 633
+T ++ + KA M
Sbjct: 624 TYTILIGYFCKEGKLTKACFFFEQM 648
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
F +LKLL +R + + + +K K + + + +++ +G EA
Sbjct: 97 FVCSSLLKLL------ARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEA 150
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKEL---------------VKLIER 289
L ++N +++ N PD+ A +S+ L G+V + +++ V ++ +
Sbjct: 151 LELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTK 210
Query: 290 MRQKPSKRIKNMH--RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
K K + H K W P++V YN +++ + + +FK+L+ G P
Sbjct: 211 GLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLP 270
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TYG + + GK++ V + +M + G A+ + ++ A ++ G EA AV
Sbjct: 271 TVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAV 330
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
R M + G + Y L C+ G+ ++A ++E R P + ++T LI
Sbjct: 331 RWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIR-RGLFPNKFSYTPLI 384
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 112/270 (41%), Gaps = 27/270 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL KG + A +L + D+ FV L+ + G EA ++F L +
Sbjct: 453 LMSGLCKKGRFPAAKQLL---VEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTI 509
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + + +++ + G++ + + +RM ++ V PD
Sbjct: 510 ER-GIDTSVVECNAMIKGYCKYGMMNDALLCFKRM---------------FNGVHSPDEF 553
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ +++ V + +G +F + K KP+ T+ + ++G + + F +M
Sbjct: 554 TYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEM 613
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +TY +L+ F +EGK+ +A M + + + L NG
Sbjct: 614 RSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLV-----NGLT 668
Query: 436 QDAMLVVEKIKSLRHSKP-LEITFTGLIIS 464
+ + + +S +S+P L + F G++IS
Sbjct: 669 NNNGIAISSKRS--NSQPNLTLEFFGMMIS 696
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 130/310 (41%), Gaps = 35/310 (11%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
RP A+R+F + + D+ ++S+ LG+ R K + ++ +
Sbjct: 149 RPDIAVRLFLSLHRSHRVAQDLPLFNSLLDALGK-----------SRHASKAASLVRALE 197
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
R+ PD+V YN + + + +Q+ +SG+ P+ TY + ++ ++
Sbjct: 198 RR-----FPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRA 252
Query: 363 GKYDLVHEFFRKMAKSGEA-----IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
G+ FF +M K G ++Y ++ G++++A M + G
Sbjct: 253 GQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPP 312
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
T + Y L +C G +DA+ V + + + P +T+T LI G ID + +
Sbjct: 313 TIATYNALIQVICKKGNVEDAVTVFDDMIR-KDYIPNVVTYTVLIRGLCHVGKIDRAMKL 371
Query: 478 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
+ MK+ CEP + T N +++ KA LFE ++ G P+
Sbjct: 372 MERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERMSK------------GEECLPN 419
Query: 537 EYTYSSMLEA 546
+ TY+ ++ A
Sbjct: 420 QDTYNIVISA 429
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 42/222 (18%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
R + D +PD+V Y +++ + Q +F ++ K G P+ ATY ++V+ +
Sbjct: 268 RGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKK 327
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G + F M + +TY VL+R GKI+ A+ + M+ G
Sbjct: 328 GNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEG-------- 379
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
+P+ T+ LI S + G +D + +F+ M
Sbjct: 380 ----------------------------CEPVVQTYNVLIRYSFEEGEMDKALHLFERMS 411
Query: 483 --DHCEPNIGTVN----AMLKVYSRNDMFSKAKELFEETTRA 518
+ C PN T N AM DM A+ + E R
Sbjct: 412 KGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEMVERG 453
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 27/312 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+R+ + L D + T++ +R M +SG+ T+ +LKG G +
Sbjct: 197 ERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQ 256
Query: 208 QAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDI 264
A + + G KD+ YT ++ LG AG+ +A ++F+ M E C P I
Sbjct: 257 HAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCP--PTI 314
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
A Y+++ + + G +++ V + + +M RK++ P++V Y ++
Sbjct: 315 ATYNALIQVICKKGNVEDAVTVFD-----------DMIRKDYI----PNVVTYTVLIRGL 359
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-G 383
+ + ++++ G +P TY + + + G+ D F +M+K E +
Sbjct: 360 CHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERMSKGEECLPN 419
Query: 384 ALTYKVLVRAFWEEGKINE-AVAA--VRNMEQRGVVGTASVYYELACCLCNNGRWQ---D 437
TY +++ A + + + A+AA V M +RG + + + L G Q D
Sbjct: 420 QDTYNIVISAMFVRKRAEDMAIAARMVMEMVERGYLPRRFMLNRVLNGLMLTGNQQLSRD 479
Query: 438 AMLVVEKIKSLR 449
+ + EK + LR
Sbjct: 480 LLRMQEKYRRLR 491
>gi|297806669|ref|XP_002871218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317055|gb|EFH47477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1029
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 118/575 (20%), Positives = 234/575 (40%), Gaps = 63/575 (10%)
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ---VGLLKELVKLIERMRQKPSKRIKN 300
PH A+R FN + + Y+++ G+ + ++ ELVK +E+
Sbjct: 168 PHLAMRFFNWVKLKDGFSHRVGIYNTMLSIAGEARNLDMVDELVKEMEK----------- 216
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+ D+ + +++ + + VF+++RKSG + AA Y + + +
Sbjct: 217 -------HACDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDAAAYNIMIRSLC 269
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+G+ DL EF+++M + G G TYK+L+ + K++ + +M + +
Sbjct: 270 IAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHD 329
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKS---LRHSKPLEITFTGLIISSMDGGHIDDCISI 477
+ L C +G+ ++A+ ++ ++K+ +K EI GL + D + I
Sbjct: 330 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLC----RANRMVDALEI 385
Query: 478 FQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
MK + ++ Y R + SKA E FE + G P P
Sbjct: 386 VDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFE-----------IIKKSGRP--PRV 432
Query: 538 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE--HAF 595
TY+ +++ Q+E ++ M SG + D A V A G+ + E F
Sbjct: 433 STYTEIMQQLFKLKQFEKGCNLFSEMIESGIEPDSV--AITAVVAGHLGQNRVAEAWKVF 490
Query: 596 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 655
S+ E G P ++ + + S Y++ + L N M + I + ++ + S E
Sbjct: 491 GSMEEKGIKPTWKSYSIFMKELCRSSRYDEIITLFNQMHASKIAIRDDIFSWVISSMEKN 550
Query: 656 ISRDKLEKLLNALCNCNAASSEITVSNLSRALHA--LCRSEKERDLSSSAHFGSQAIDIS 713
++K++ + CNA + E+ S + + + + + + + SA +
Sbjct: 551 GEKEKIDLIKEIQKQCNAYNQELNGSGKAEFMQKELVNKYNRPQVVQQSA--------LP 602
Query: 714 PLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLSRQADA 773
P + DV+E +V SSS +E + L + + ++ + ++ + Q +A
Sbjct: 603 PASSAVDKMDVQEICHVLSSSRD--WERTQEALEKLTVQFTPELVVEVLRNAKI--QGNA 658
Query: 774 DTEMFS---KALSYIHSNDRPSNLCIDMEGLADDW 805
FS K Y H N N+ I + G D+
Sbjct: 659 VLRFFSWVGKRNGYKH-NSEAYNMSIKVAGCGKDF 692
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+++ G+KP Y + + +++ V E KM + +TY ++ + GK
Sbjct: 878 MKEIGIKPGVHVYTSLIVHFFKEKQFEKVLETCHKMKEESCEPSVVTYTAMICGYMSLGK 937
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ EA A RN+E++G Y + CLC G+ +DA+
Sbjct: 938 VEEAWKAFRNIEEKGTSPDFKTYSKFINCLCQAGKSEDAL 977
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 94/255 (36%), Gaps = 51/255 (20%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDL--VHEFFRKMAKSG---------EAIGAL 385
FK+++ GL PS++T+ + V+ + ++ + FR+M +SG + +G L
Sbjct: 734 FKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATKTFREMIRSGFVPDRELVQDYLGCL 793
Query: 386 T-------------------------YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
Y + +RA GK+ EA++ + + E +
Sbjct: 794 CEVGNTKDAKSCLDSLGKIGFPVPVAYSIYIRALSRIGKLEEALSELASFEGDRSLLDQY 853
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y + L G A+ V +K + KP +T LI+ + +
Sbjct: 854 TYGSIVHGLLQRGDLHKALDKVNSMKEI-GIKPGVHVYTSLIVHFFKEKQFEKVLETCHK 912
Query: 481 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
MK+ CEP++ T AM+ Y +A + F +S PD T
Sbjct: 913 MKEESCEPSVVTYTAMICGYMSLGKVEEAWKAFRNIEEKGTS-------------PDFKT 959
Query: 540 YSSMLEASATAHQWE 554
YS + A + E
Sbjct: 960 YSKFINCLCQAGKSE 974
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN + +K + +F ++R+ G + T+ + + ++G ++ F++M
Sbjct: 679 YNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMK 738
Query: 377 KSGEAIGALTYKVLVRAFWEEG--KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
G + T+K L+ E+ + EA R M + G V + + CLC G
Sbjct: 739 DMGLIPSSSTFKCLITVLCEKKGRNVEEATKTFREMIRSGFVPDRELVQDYLGCLCEVGN 798
Query: 435 WQDAMLVVEKIKSLRHSKPL 454
+DA ++ + + P+
Sbjct: 799 TKDAKSCLDSLGKIGFPVPV 818
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 108/273 (39%), Gaps = 20/273 (7%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
K R M +SG + + L L + G+ + A S LD + K Y+ +
Sbjct: 769 KTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL----GKIGFPVPVAYSIYI 824
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
L + G+ EAL D +L D Y S+ L Q G L + + + M++
Sbjct: 825 RALSRIGKLEEALSELASFEGDRSLL-DQYTYGSIVHGLLQRGDLHKALDKVNSMKEIG- 882
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
++P + VY +++ Q++ V ++++ +PS TY
Sbjct: 883 --------------IKPGVHVYTSLIVHFFKEKQFEKVLETCHKMKEESCEPSVVTYTAM 928
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + GK + + FR + + G + TY + + GK +A+ + M +G+
Sbjct: 929 ICGYMSLGKVEEAWKAFRNIEEKGTSPDFKTYSKFINCLCQAGKSEDALKLLSEMLDKGI 988
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ + + L G+ A +V+ K +L
Sbjct: 989 APSTINFRTVFYGLNREGKQDLARIVLHKKSAL 1021
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/480 (19%), Positives = 181/480 (37%), Gaps = 36/480 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V +LL L R EA+ + + + PD +Y+ LLK L
Sbjct: 130 IVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNI---------LLKGLCN--- 177
Query: 289 RMRQKPSKRIKNMHRKNWDPV--LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
++ + ++ +H D V P++V Y+ V+N Q + +F ++ G+
Sbjct: 178 --EKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIP 235
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P TY ++ + ++ +D F++M +G TY L+ + GK E V
Sbjct: 236 PDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRM 295
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M G Y L LC NGR ++A + + + KP T+ ++
Sbjct: 296 LEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIG-KGIKPSVTTYGIMLHGYA 354
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
G + + + M + PN N Y++ + KA ++F + +
Sbjct: 355 TKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQG------ 408
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
L PD +Y ++++A + + E + M G D + L+
Sbjct: 409 -------LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTV 461
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 645
K +E F +L G P+ +FF +L + + L++++ +
Sbjct: 462 DKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISY 521
Query: 646 TELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHF 705
L + + + D+ KLL + + + + L LH C++ R S+ +HF
Sbjct: 522 NTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTL---LHGYCKA--GRIDSAYSHF 576
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 201/480 (41%), Gaps = 58/480 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ +L L K GR E R+ + +E + PD+ +Y+++ G + E KL+E M
Sbjct: 486 FNTILCNLCKEGRVMEGQRLVD-SIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGM 544
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
L+PD YN +L+ + + + F+++ +G+ P
Sbjct: 545 VSVG---------------LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVV 589
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + Q+ ++ E + M SG TY +++ + ++EA+ +N+
Sbjct: 590 TYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+G+ + + L GR +DAM + I + + + +T+ ++ + ++ G
Sbjct: 650 CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNV-VTYRLVVENLIEEGS 708
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAML-KVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+++ S+F M K+ PN +NA++ ++ R D+ +RA + +LS
Sbjct: 709 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI-----------SRAGA----YLS- 752
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYF---EYVYKGMALSGCQ--LDQTKHAWLLVEAS 583
K DE +S +EAS T+ F EY + +L L++ + L+ +A
Sbjct: 753 -----KLDERNFS--VEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKAR 805
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA----VALINAMAYAPFH 639
R + L F +L G P + + +L + +A +++IN+ +
Sbjct: 806 RIDDAYSL---FREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 862
Query: 640 ITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDL 699
L +SN D+ K+ +LC+ + IT + + AL R E DL
Sbjct: 863 TYNIILNGLCKSN----CVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 918
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 26/223 (11%)
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
A++ KA R +A +F ML L PD+ Y+++ L Q G E +L M S
Sbjct: 799 ALIKKARRIDDAYSLFREMLMK-GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN--S 855
Query: 296 KRIKNMHRKN----------------------WDPVLEPDLVVYNAVLNACVPSHQWKGV 333
+ N++ N L+ +++ +N ++ A + + +
Sbjct: 856 RTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDA 915
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+F + +GL P TY L E +++ G + F M KSG + + LVR
Sbjct: 916 MDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRR 975
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ G I+ A A + ++++ AS EL L + G +Q
Sbjct: 976 LLQRGDISRAGAYLSKLDEKNFSLEASTTSELI-SLFSRGEYQ 1017
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 151/368 (41%), Gaps = 32/368 (8%)
Query: 237 ILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
++ + EA+ IF N ++ + D+ Y+ + LG+ ++ +VK++
Sbjct: 97 VINRGNLGGEAMVIFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFVVKVL-------- 148
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K+MH + + P+ + V+++ + + Q +F+ L + G K + +
Sbjct: 149 ---KDMHIQG----ISPNYETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVL 201
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + Q + FF M K G +TY +++ + + GKI E ++ M G
Sbjct: 202 LQCLCQRSHVGAANLFFNAM-KGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGF 260
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ L L GR DA+ V ++ P + LI + + D+C+
Sbjct: 261 SPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEE-TGCVPNACVYNALISNFISTRDFDECL 319
Query: 476 SIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 534
+ M +C+PN+ T ++ + + + A E+ +E G +
Sbjct: 320 KYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMV-------------GRGMI 366
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
P +S +E +YK GC++ + + LL+ SR GKC +L +
Sbjct: 367 PTTGAITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNL 426
Query: 595 FDSLLEAG 602
+D + E+G
Sbjct: 427 WDEMQESG 434
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 86/216 (39%), Gaps = 16/216 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++ L+ LG+AGR +A+ +F+ M E+ P+ Y+++ E +K
Sbjct: 265 LTFSHLIEGLGRAGRIDDAVEVFHHM-EETGCVPNACVYNALISNFISTRDFDECLKYYN 323
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M N DP ++ Y ++ A + + + + ++ G+ P+
Sbjct: 324 FMVSS-----------NCDPNMD----TYTKLIVAFLKARKVADALEMLDEMVGRGMIPT 368
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+E + Q G ++K K G I YK+L+ GK +
Sbjct: 369 TGAITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWD 428
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
M++ G VY + LCN G+ A+LV+E+
Sbjct: 429 EMQESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEE 464
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 16/213 (7%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+S F Y ++ + K G A +F+ M + L PDI Y+S+ G++GLL E
Sbjct: 250 QSVFTYNIMIGYMCKEGDMVTAKSLFHQM-KQMGLTPDIVTYNSLIDGYGKLGLLDESFC 308
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L E M+ D EPD++ YNA++N Q F +++ SGL
Sbjct: 309 LFEEMK---------------DVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGL 353
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
KP+ TY ++ + + +F M + G + TY L+ A + G +++A+
Sbjct: 354 KPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALK 413
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
M Q V Y L LC GR +A
Sbjct: 414 LADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEA 446
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 50/247 (20%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
V P V++A+ + + + F ++ + + P A + + + ++GK DL
Sbjct: 177 VCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLS 236
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
++FFR M +G A TY +++ +EG + A + M+Q G+
Sbjct: 237 NKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLT------------ 284
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 487
P +T+ LI G +D+ +F+ MKD CEP
Sbjct: 285 ------------------------PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEP 320
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++ T NA++ + + + KA E +SG LKP+ TYS++++A
Sbjct: 321 DVITYNALINCFCKYEQMPKAFHFLHEM---KNSG----------LKPNVVTYSTLIDAL 367
Query: 548 ATAHQWE 554
H +
Sbjct: 368 CKEHMLQ 374
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 90/474 (18%), Positives = 182/474 (38%), Gaps = 76/474 (16%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L++ + E K + F+ M SGL L+ L + +QA+ L
Sbjct: 328 LINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFL------L 381
Query: 221 DKRDL---KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
D R + + F YT L+ KAG +AL++ + ML+ ++ V T
Sbjct: 382 DMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQV------QVGFNVVTYTTLLD 435
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
GL KE RM + +++ R + P+L Y A+++ + + + + +
Sbjct: 436 GLCKE-----GRMMEA-----EDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELL 485
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
K++++ +KP YG + + K + +M G ++ Y + + A+++
Sbjct: 486 KEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKT 545
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
GK EA+ ++ M GV T +T
Sbjct: 546 GKTVEALNLLQEMCDLGVEVTI------------------------------------VT 569
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKD-HCEP-NIGTVNAMLKVYSRNDMFSKAKELFEET 515
F LI G +++ I F M D + +P N+ A++ +N+ AK+LF+E
Sbjct: 570 FCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEM 629
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
N + PD+ Y+++++ + ++ + M+ G +LD +
Sbjct: 630 QDKN-------------MVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAY 676
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
L+ S+ + ++ G +P + +L + + ++A+ L
Sbjct: 677 TSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIEL 730
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT ++ L K EA+ +F M C + P++ Y+S+ LG++G + ++KL++
Sbjct: 353 YTTMINGLCKIKMVDEAVNLFEEM--RCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDE 410
Query: 290 M--RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
M R +P P+++ YN++L+A +H + L+ G++P
Sbjct: 411 MHDRGQP-----------------PNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRP 453
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + ++ + QSGK + + F + G + TY V+++ F +G + A+A +
Sbjct: 454 DMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALL 513
Query: 408 RNMEQRGVVGTASVY 422
ME G + A Y
Sbjct: 514 SKMEDNGCIPNAKTY 528
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 154/386 (39%), Gaps = 36/386 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL KG QA++ D V D S Y L+ L K GR AL++ +
Sbjct: 146 LIKGLCLKGHIHQALNFHDKVVAQGFHLDQVS---YGTLINGLCKVGRITAALQLLKRV- 201
Query: 256 EDCNLY-PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
D L P+ Y+ + + + L+ + L +M +KRI PD
Sbjct: 202 -DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV---AKRI------------SPDD 245
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
N+++ Q K + ++ + P T+ + ++ + GK
Sbjct: 246 FTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGV 305
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
K + +TY L+ + +IN+A +M RGV+ Y + LC
Sbjct: 306 TMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKM 365
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVN 493
+A+ + E+++ R P +T+ LI G I + + M D + PNI T N
Sbjct: 366 VDEAVNLFEEMRC-RKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYN 424
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
++L +N KA L T L G ++PD YTY+ +++ + +
Sbjct: 425 SILDALCKNHHVDKAIALL-----------TNLKDQG--IRPDMYTYTVLIKGLCQSGKL 471
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLL 579
E + V++ + + G LD + ++
Sbjct: 472 EDAQKVFEDLLVKGYNLDVYTYTVMI 497
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y ++N +F+++R + P+ TY ++ + + GK V + +M
Sbjct: 353 YTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMH 412
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G+ +TY ++ A + +++A+A + N++ +G+ Y L LC +G+ +
Sbjct: 413 DRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLE 472
Query: 437 DAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN- 493
DA V E + L L++ T+T +I G D +++ M+D+ C PN T
Sbjct: 473 DAQKVFEDL--LVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEI 530
Query: 494 AMLKVYSR--NDMFSKAKELFEE 514
+L ++ + NDM A++L E
Sbjct: 531 VILSLFEKDENDM---AEKLLRE 550
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 101/247 (40%), Gaps = 19/247 (7%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+H KN P ++ +N +L++ V + + +Q+ +G+ T+ + +
Sbjct: 61 LHHKNP----TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
Q G L F K+ K G A+T+ L++ +G I++A+ + +G
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y L LC GR A+ +++++ + +P + + +I + ++D ++
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRVDG-KLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 235
Query: 481 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
M P+ T N+++ + +A L + N + P YT
Sbjct: 236 MVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILEN-------------INPRMYT 282
Query: 540 YSSMLEA 546
+S +++A
Sbjct: 283 FSILVDA 289
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/433 (18%), Positives = 182/433 (42%), Gaps = 30/433 (6%)
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
D S+R L + ++ L +TKLL+ + K G+ ++ + +E L
Sbjct: 71 DACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLS 130
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+I +++++ + L+ ++ +K IK L+P +V + ++
Sbjct: 131 PNI---YTLSILINCFSHLQR----VDLAFSVLAKIIK--------LGLQPTIVTFTTLI 175
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N ++ +F + G +P TY + + + G+ +KM ++G
Sbjct: 176 NWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQ 235
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+TY ++ + ++ ++NEA+ M+ +G+ Y L LCN +W++A +
Sbjct: 236 PNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASAL 295
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
+ +++SL + P +TF L+ + G + + + + M + EP++ T ++++ YS
Sbjct: 296 LNEMRSL-NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYS 354
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+A++LF+ KPD ++Y+ ++ + + + ++
Sbjct: 355 LRSEVVEARKLFDAMITKGC-------------KPDVFSYNILINGYCKVKRIDEAKQLF 401
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M G + + L+ + G + F ++ G +P+ ++ +L Q
Sbjct: 402 NEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQ 461
Query: 621 SNYEKAVALINAM 633
+ KA L AM
Sbjct: 462 GYFGKAFRLFRAM 474
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 27/284 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLVD + + ++ ++ M + G+ L+ G + +A + D +
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K D+ F Y L+ K R EA ++FN M+ L P+ +Y+++ L Q+G
Sbjct: 373 GCKPDV---FSYNILINGYCKVKRIDEAKQLFNEMIHQ-GLTPNNVSYNTLIHGLCQLGS 428
Query: 280 LKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L+E L + M +Q + + R +P+LV+YN
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNI 488
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++A S + +F +L GL+P+A Y + + + G D E FR M + G
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG 548
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV---VGTAS 420
++Y V++R F + AV + M +G VGT +
Sbjct: 549 CPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGTTA 592
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 140/338 (41%), Gaps = 23/338 (6%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQW-KGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+HRK P+ P ++ + +L+A V Q+ V + KQ+ +GL P+ T + +
Sbjct: 89 LHRK---PL--PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCF 143
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ DL K+ K G +T+ L+ + GK +A+ +M RG
Sbjct: 144 SHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDV 203
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y + LC G A +++K++ +P +T++ +I S +++ + IF
Sbjct: 204 YTYTTIINGLCKIGETAAAAGLLKKMEE-AGCQPNVVTYSTIIDSHRKDRRVNEALDIFS 262
Query: 480 HMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
+MK P+I T N++++ + +A L E N + PD
Sbjct: 263 YMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLN-------------IMPDIV 309
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
T++ +++ + + V K M G + D ++ L+ S + FD++
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369
Query: 599 LEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALINAMAY 635
+ G P +F +LI + ++A L N M +
Sbjct: 370 ITKGCKPD-VFSYNILINGYCKVKRIDEAKQLFNEMIH 406
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 117/289 (40%), Gaps = 29/289 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + W++A ++L+ + L D+ + + L+ + K G+ EA + M
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVT---FNVLVDTICKEGKVSEAQGVLKTMT 335
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK-----------------RI 298
E + PD+ Y S+ + E KL + M K K RI
Sbjct: 336 E-MGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRI 394
Query: 299 ---KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K + + L P+ V YN +++ + +FK + +G P+ TY +
Sbjct: 395 DEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSIL 454
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + G + FR M + + Y +L+ A + G + +A + +G+
Sbjct: 455 LDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGL 514
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH--SKPLEITFTGLI 462
A +Y + LC G +A+ E +++ P EI++ +I
Sbjct: 515 QPNAQIYTTIINGLCKEGLLDEAL---EAFRNMEEDGCPPDEISYNVII 560
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 165/442 (37%), Gaps = 79/442 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL KG +A ++D + K S F + L+ G +A L +
Sbjct: 274 VINGLARKGELEKAAQLVDRMRMSKKA----SAFTFNPLITGYFARGSVEKA-GALQLEM 328
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ + P + Y+++ + + G ++ + R+K + + L PDL+
Sbjct: 329 ENEGIVPTVVTYNTIIHGMFRSGNVE-------------AARMKFVEMRAMG--LLPDLI 373
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN+++N + K W+F L+++GL PS TY + ++ + G + F ++M
Sbjct: 374 TYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM 433
Query: 376 AKSGEAIGALTYKVL------------VRAFWEE-----------------------GKI 400
+ G TY +L VR F++E G
Sbjct: 434 VEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGST 493
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
+EA M RG+ Y LC +G +DA ++ K+ S +P IT+T
Sbjct: 494 SEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS-DGLQPDCITYTC 552
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEET 515
LI + + G + + IF M P+ T + Y R A +++ EE
Sbjct: 553 LIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG 612
Query: 516 TRANSSGYTFLSGDGA------------------PLKPDEYTYSSMLEASATAHQWEYFE 557
R N Y L L P++YTY+ +++ + WE
Sbjct: 613 VRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAI 672
Query: 558 YVYKGMALSGCQLDQTKHAWLL 579
+Y M G D H L
Sbjct: 673 RLYSEMHQHGIHPDHCTHNALF 694
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 135/351 (38%), Gaps = 31/351 (8%)
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG-LKDKRDLKSRFV 230
A KFV M GL+ L+ G G+ ++A+ W++G LK S
Sbjct: 355 AARMKFVE-MRAMGLLPDLITYNSLINGYCKAGNLKEAL----WLFGDLKRAGLAPSVLT 409
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL + G EA R M+E PD++ Y + +V L + + + M
Sbjct: 410 YNILLDGYCRLGDLEEARRFKQEMVEQ-GCQPDVSTYTILMNGSRKVRNLAMVREFFDEM 468
Query: 291 RQK---PSKRIKNMHRKNWDPVL------------------EPDLVVYNAVLNACVPSHQ 329
K P N R + + +L D V YN L+ S
Sbjct: 469 LSKGLQPDCFAYNT-RISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGN 527
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
K + ++ ++ GL+P TY + + G+ + F M SG A+TY V
Sbjct: 528 LKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTV 587
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
+ A+ G + A + M + GV Y L LC GR A ++ R
Sbjct: 588 FIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLE-R 646
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
P + T+T LI + G+ ++ I ++ M H P+ T NA+ K +
Sbjct: 647 GLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 128/322 (39%), Gaps = 27/322 (8%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F+++ G+ P L + + ++D + + +M + G +TY L+ +F+
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243
Query: 397 EGKINEAVAAVRNMEQR--GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
EG++++A +R ME R G + + Y + L G + A +V++++ + K
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK--KAS 301
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
TF LI G ++ ++ M++ P + T N ++ R+ A+ F
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361
Query: 514 E-----------TTRANSSGYT---------FLSGD--GAPLKPDEYTYSSMLEASATAH 551
E T + +GY +L GD A L P TY+ +L+
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLG 421
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
E + M GCQ D + + L+ + + ++ FD +L G P +
Sbjct: 422 DLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYN 481
Query: 612 EMLIQAIVQSNYEKAVALINAM 633
+ ++ + +A L M
Sbjct: 482 TRISAELILGSTSEAFQLTEVM 503
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 108/286 (37%), Gaps = 29/286 (10%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P I Y+++ + + G + + KL+ M +P + P V YN V+
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCL-------------PSDVTYNVVI 275
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N + + + ++R S K SA T+ + G + +M G
Sbjct: 276 NGLARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIV 334
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+TY ++ + G + A M G++ Y L C G ++A+ +
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
+K + P +T+ L+ G +++ Q M + C+P++ T ++
Sbjct: 395 FGDLKRAGLA-PSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSR 453
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ + +E F+E S G L+PD + Y++ + A
Sbjct: 454 KVRNLAMVREFFDEML---SKG----------LQPDCFAYNTRISA 486
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 155/392 (39%), Gaps = 36/392 (9%)
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP----SHQWKGVFWVFKQLRKSGLKPSA 349
P + + HR D + + +N+VLN + S+ +K VF K G +P+
Sbjct: 116 PGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSK-GFQPNL 174
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY L ++ + + G+ D + FR+M TY L+ +E +++EAV +
Sbjct: 175 LTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDE 234
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M+ G + + L L NG A +V+ + L+ P E+T+ LI G
Sbjct: 235 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM-FLKGCVPNEVTYNTLIHGLCLKG 293
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+D +S+ + M C PN T ++ + RA + +S
Sbjct: 294 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ-------------RRAEDGVHILMSM 340
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ K +EY YSS++ + E ++K MA GC+ + + + R K
Sbjct: 341 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKP 400
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
E +L G +P+ ++ ++ + + +KA+ + W E+
Sbjct: 401 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILV---------------WKEM 445
Query: 649 FESNEDRISRDKLEKLLNALCNCNAASSEITV 680
S + R + LLN LC +TV
Sbjct: 446 M-SQDMRHNVVCCSVLLNGLCESGRLREALTV 476
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 139/354 (39%), Gaps = 64/354 (18%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ + GKA P EA+ F+ M D + + +++SV + Q G K
Sbjct: 102 IFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLH 161
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ SK +P+L+ YN ++ A Q F+++ P
Sbjct: 162 VFGANSKG------------FQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDV 209
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY M + + + D +M G +T+ VL+ A + G ++ A V N
Sbjct: 210 FTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDN 269
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM--- 466
M +G V Y L LC G+ A+ ++EK+ S + P ++T+ G II+ +
Sbjct: 270 MFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK-CVPNQVTY-GTIINGLVKQ 327
Query: 467 ----DGGHI-----------------------------DDCISIFQHMKDH-CEPNIGTV 492
DG HI ++ + +++ M + C+PN+
Sbjct: 328 RRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVY 387
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
A + R++ +A+++ +E S G+ P+ +TYSS+++
Sbjct: 388 GAFIDGLCRDEKPDEAEDILQEML---SKGFL----------PNAFTYSSLMKG 428
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 152/351 (43%), Gaps = 50/351 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLM 254
L+ GL + +A+ +LD ++ + L + + L+ L K G A ++ N+
Sbjct: 215 LMNGLCKERRVDEAVFLLDE---MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMF 271
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM------------H 302
L+ C P+ Y+++ L G L + + L+E+M SK + N
Sbjct: 272 LKGC--VPNEVTYNTLIHGLCLKGKLDKALSLLEKMVS--SKCVPNQVTYGTIINGLVKQ 327
Query: 303 RKNWDPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
R+ D V + + +Y+++++ + + ++K++ + G KP+ Y
Sbjct: 328 RRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVY 387
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
G ++ + + K D + ++M G A TY L++ F+++G +A+ + M
Sbjct: 388 GAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMS 447
Query: 413 RGVVGTASVYYELACC------LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ + + + CC LC +GR ++A+ V + KP + ++ +I
Sbjct: 448 Q------DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLG-EGLKPDVVAYSSMIKGLC 500
Query: 467 DGGHIDDCISIFQHMKDHCE-----PNIGTVNAMLKVYSRNDMFSKAKELF 512
D G +D + +F M+ C+ P++ T N + R D ++A +L
Sbjct: 501 DVGSVDKGLKLFYEMQ--CQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 549
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/460 (20%), Positives = 173/460 (37%), Gaps = 69/460 (15%)
Query: 133 QLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQ 192
+LG F + +E + R E I ++DR+ F+ I G G+
Sbjct: 62 KLGDATFYRLIENYATSR---EFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGE 118
Query: 193 MLKLLKGLGDKGSWRQAM----SVLDW----------------VYGLKDKRDLKSRFVYT 232
+ + + +Q + SVL+ V+G K + Y
Sbjct: 119 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYN 178
Query: 233 KLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
++ L K G+ A+ F M L++CN PD+ Y ++ L + + E V L++ M+
Sbjct: 179 LIIKALCKLGQIDRAVDTFREMPLKNCN--PDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ P+ V +N +++A + + + G P+ T
Sbjct: 237 AEGCL---------------PNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVT 281
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + + GK D KM S +TY ++ ++ + + V + +ME
Sbjct: 282 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSME 341
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+RG +Y L L G+ ++A+ + +++ + KP + + I
Sbjct: 342 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE-KGCKPNVVVYGAFIDGLCRDEKP 400
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRAN------- 519
D+ I Q M PN T ++++K + + KA KE+ + R N
Sbjct: 401 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 460
Query: 520 -----SSG--------YTFLSGDGAPLKPDEYTYSSMLEA 546
SG +T + G+G LKPD YSSM++
Sbjct: 461 LNGLCESGRLREALTVWTHMLGEG--LKPDVVAYSSMIKG 498
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 21/214 (9%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK + +D L E + ++ M G + L+KG KG +
Sbjct: 377 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 436
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTK-LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+A +L W + +D++ V LL L ++GR EAL ++ ML + L PD+ A
Sbjct: 437 KA--ILVWKEMMS--QDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGE-GLKPDVVA 491
Query: 267 YHSVAVTLGQVGLLKELVKLIERMR-QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y S+ L VG + + +KL M+ Q+P R PD+V YN + NA
Sbjct: 492 YSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSR--------------PDVVTYNILFNALC 537
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
+ + G P + T + +E +
Sbjct: 538 RQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 152/377 (40%), Gaps = 34/377 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G KG +Q +V L+D ++ Y L+ +AG ++ M
Sbjct: 323 LLGGYSRKGQLQQIDTVKTL---LRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEM- 378
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
DC++ P+ Y + G ++ VKL+ M+Q + PD
Sbjct: 379 RDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAG---------------VTPDAH 423
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYN ++N + Q + F +++ G++P ++ ++ ++G+ + + KM
Sbjct: 424 VYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKM 483
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G A A T+ +++ E + N+ V M +G+ Y L +
Sbjct: 484 VNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLF 543
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
QDA+ ++ +K P ++ L + G + + + Q M K++ E N+ +N
Sbjct: 544 QDAVECLQTMKE-DGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNL 602
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ +S +A +FE A L D+ TY+++++A A + +
Sbjct: 603 LINAFSMAGRSQEAFAVFEYIKEAG-------------LTADKITYTTLMKALIRAEKLD 649
Query: 555 YFEYVYKGMALSGCQLD 571
V+ M +GC+ D
Sbjct: 650 EVSGVFDEMIKAGCRPD 666
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 157/390 (40%), Gaps = 32/390 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VY L+ G+A +P+E + F L+ L D +Y S+ ++LG+ G E L+E
Sbjct: 249 VYNDLIFACGQAHKPNEGM-FFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEE 307
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ W L P+L YN +L Q + + V LR +G+ +
Sbjct: 308 MK--------------WYG-LRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINK 352
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY L ++ ++G D + +++M Y ++ + + G+ + V +R
Sbjct: 353 ITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLRE 412
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M+Q GV A VY + + + A + K++ +P +++ LI + G
Sbjct: 413 MQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQD-GGIEPDVVSWNSLIDACCKAG 471
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+ ++ M D C P T N ++ + ++ E+ EE S G
Sbjct: 472 QPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEM---RSKG------ 522
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ P+ TY+++++ A A ++ + M G T ++ L ++ G C
Sbjct: 523 ----MFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMC 578
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
H + +E I L +LI A
Sbjct: 579 EQTLHVLQT-MEKENIEINLAMLNLLINAF 607
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 173/433 (39%), Gaps = 40/433 (9%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD---WVYGLKDKRDLKSRFVYTK 233
F+ + SGL+ + L+ LG G +A ++L+ W YGL+ +LK+ Y
Sbjct: 269 FLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMKW-YGLRP--NLKA---YNT 322
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL + G+ + + +L D + + Y + + GL+ L L + MR
Sbjct: 323 LLGGYSRKGQLQQ-IDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMR-- 379
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
D + P+ +Y ++ + QW+ + ++++++G+ P A Y
Sbjct: 380 -------------DCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYN 426
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + ++ + + F KM G +++ L+ A + G+ EA M
Sbjct: 427 VIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVND 486
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G TA + + L + RW D +VE+++S + P +T+T L+ D
Sbjct: 487 GCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRS-KGMFPNVVTYTTLVDVYAQARLFQD 545
Query: 474 CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ Q MK D P+ +A+ Y++ M + + + + N
Sbjct: 546 AVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIE---------IN 596
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
L ++ A + + FEY+ + +G D+ + L+ RA K +
Sbjct: 597 LAMLNLLINAFSMAGRSQEAFAVFEYIKE----AGLTADKITYTTLMKALIRAEKLDEVS 652
Query: 593 HAFDSLLEAGEIP 605
FD +++AG P
Sbjct: 653 GVFDEMIKAGCRP 665
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 117/312 (37%), Gaps = 62/312 (19%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF--FRK 374
YNA++ A + + +++ G P +Y ++ + G D+ F F++
Sbjct: 179 YNALVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQA-CRHGVVDIYTGFRLFQE 237
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G + Y L+ A + K NE + + ++ G+V Y L L +GR
Sbjct: 238 MQAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGR 297
Query: 435 WQDAMLVVEKIK------SLRHSKPL----------------------------EITFTG 460
+A ++E++K +L+ L +IT+
Sbjct: 298 TAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCL 357
Query: 461 LIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI + G +D +++Q M+D C+ PN M+ +Y + K +L E +A
Sbjct: 358 LIDAYARAGLMDRLEALYQEMRD-CDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQA 416
Query: 519 -------------NSSGYT---------FLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
N+ G T F ++PD +++S+++A A Q
Sbjct: 417 GVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEA 476
Query: 557 EYVYKGMALSGC 568
+Y M GC
Sbjct: 477 RKLYYKMVNDGC 488
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 142/356 (39%), Gaps = 52/356 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V + VL A +++ V ++F ++ G+ ++ + + + ++ L
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV------------------------ 407
KM K G +T L+ F + + EAV+ V
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732
Query: 408 -----------RNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLE 455
ME++G+V A Y L LCN+GRW DA L+ + +K R P
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVK--RKIDPNV 790
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
I FT LI + + G++ + ++++ M + PNI T N+++ + AK +F+
Sbjct: 791 IFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDL 850
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
PD TY++++ + + E ++ M G D
Sbjct: 851 MVSKGCF-------------PDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
+ L+ +AGK ++ + F+ +++ G P + + +L EKA+ ++
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMV 953
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 114/260 (43%), Gaps = 18/260 (6%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
R + L+ YG++ K + Y L++ L +GR +A R+ M++ + P++
Sbjct: 734 RDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR-KIDPNVIF 792
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
+ ++ T + G L E KN++++ + P+++ YN+++N
Sbjct: 793 FTALIDTFVKEGNLLE---------------AKNLYKEMIRRSVHPNILTYNSLINGFCI 837
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ +F + G P TY + +S + + + F +M G A T
Sbjct: 838 QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L+ + + GK+N A M GV Y L CLCNNG+ + A+++VE ++
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957
Query: 447 SLRHSKPLEITFTGLIISSM 466
++ ++I +II M
Sbjct: 958 --KNQMDVDIITYNIIIQGM 975
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 142/381 (37%), Gaps = 59/381 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ +T L+ + R AL + M++ P I S+ Q +E V L++
Sbjct: 651 YSFTILIHCFCRCSRFSLALALLGKMMK-LGFQPSIVTLGSLLNGFCQGNRFQEAVSLVD 709
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + LEP++V+YN V+N + +F + K G+
Sbjct: 710 SMAELG---------------LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVAD 754
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A TY + + SG++ R M K + + L+ F +EG + EA +
Sbjct: 755 AVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYK 814
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +R V Y L C GR DA + + + S + P +T+ LI
Sbjct: 815 EMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS-KGCFPDVVTYNTLITGFCKS 873
Query: 469 GHIDDCISIFQHMKDHCEPNIG---TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
++D + +F M + +G T N ++ Y + + A+++F
Sbjct: 874 KRVEDGMKLFCEMTH--QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC------- 924
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWE-------------------YFEYVYKGMALS 566
G P PD TY+ +L+ + E + + +GM
Sbjct: 925 ----GVP--PDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGM--- 975
Query: 567 GCQLDQTKHAWLLVEA-SRAG 586
C+ D+ K AW L + +R G
Sbjct: 976 -CRNDKVKEAWCLFRSLTRKG 995
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 128/317 (40%), Gaps = 32/317 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VY L+ L K G + AL + N M + L D+ Y+++ L G ++ +++
Sbjct: 172 VYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRD 231
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M ++ + PD+ + A+++A V ++KQ+ +S + P+
Sbjct: 232 MTKRR---------------INPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + G+ + F MA G +TY L+ F + ++ + + +
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M + G+VG Y L C G+ + A + + S + P IT L+ G
Sbjct: 337 MYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVT-PDIITHCILLHGLCVNG 395
Query: 470 HIDDCISIFQHMKDHCEPNIGTV--NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
I + F M+ E +G V N M+ + D +A ELF R G
Sbjct: 396 EIGSAMVKFNDMRSG-EKYLGIVAYNIMIHGLCKADKVEEAWELF---CRLPVEG----- 446
Query: 528 GDGAPLKPDEYTYSSML 544
+KPD TY+ M+
Sbjct: 447 -----VKPDARTYTIMI 458
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR------FVYTKLLAILGKAGRPHEALR 249
LL GL G WRQA +L RD+ R F +T L+ K G EA
Sbjct: 212 LLTGLCYSGEWRQAARIL---------RDMTKRRINPDVFTFTALIDAFVKQGNLDEAQE 262
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
++ ML+ ++ P+ Y+S+ L G L K + M K
Sbjct: 263 LYKQMLQS-SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGC-------------- 307
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
P++V YN ++N S + + +F+++ + GL TY + Q GK +
Sbjct: 308 -FPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAK 366
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+ F M G +T+ +L+ G+I A+ +M
Sbjct: 367 DIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM 407
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 109/259 (42%), Gaps = 16/259 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V + +L A +++ V + +Q+ G+ ++ + + + + L
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K G +T+ L+ F +I++A + V +M + G VY L CLC
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182
Query: 432 NGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
NG A+ L+ E K R + L +T+ L+ G I + M K P++
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADL-VTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDV 241
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T A++ + + +A+EL+++ +++ + P+ TY+S++
Sbjct: 242 FTFTALIDAFVKQGNLDEAQELYKQMLQSS-------------IGPNTVTYNSLINGLCM 288
Query: 550 AHQWEYFEYVYKGMALSGC 568
+ + + + MA GC
Sbjct: 289 HGRLYHAKKTFDLMASKGC 307
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 20/273 (7%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P +V + ++L+ ++ F + + KSG +P+ Y ++ + ++G ++ E
Sbjct: 132 DPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALE 191
Query: 371 FFRKMAKSGE-AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M K G A +TY L+ G+ +A +R+M +R + + L
Sbjct: 192 LLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAF 251
Query: 430 CNNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
G +A E K + S P +T+ LI G + F M C
Sbjct: 252 VKQGNLDEAQ---ELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCF 308
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ T N ++ + ++ +LF+ R G D +TY++++
Sbjct: 309 PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG-------------DTFTYNTLIHG 355
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ + ++ M G D H LL
Sbjct: 356 YCQVGKLRVAKDIFSWMVSCGVTPDIITHCILL 388
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 26/272 (9%)
Query: 196 LLKGLGDKGSWRQAMSVL-DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ GL + G W A +L D V K K D F +T L+ K G EA ++ M
Sbjct: 761 LISGLCNSGRWTDAARLLRDMV---KRKIDPNVIF-FTALIDTFVKEGNLLEAKNLYKEM 816
Query: 255 LEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKP--------------SKR 297
+ +++P+I Y+S+ G++G K + L+ P SKR
Sbjct: 817 IRR-SVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKR 875
Query: 298 IKNMHRKNWDPV---LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+++ + + L D YN +++ + + VF ++ G+ P TY +
Sbjct: 876 VEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNI 935
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + +GK + + K+ + +TY ++++ K+ EA R++ ++G
Sbjct: 936 LLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKG 995
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
V A Y + LC NG ++A + ++K
Sbjct: 996 VKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 15/203 (7%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R H+A + M++ P++ Y+++ L + G + ++L+ M +K
Sbjct: 150 RIHDAFSLVASMVKS-GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGR------- 201
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
L DLV YN +L S +W+ + + + K + P T+ ++ ++
Sbjct: 202 -------LAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQ 254
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
G D E +++M +S +TY L+ G++ A M +G Y
Sbjct: 255 GNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTY 314
Query: 423 YELACCLCNNGRWQDAMLVVEKI 445
L C + R +D M + +++
Sbjct: 315 NTLINGFCKSRRVEDGMKLFQRM 337
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 88/229 (38%), Gaps = 19/229 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G A + D + K Y L+ K+ R + +++F M
Sbjct: 831 LINGFCIQGRLGDAKHMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 887
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L D Y+++ Q G L K+ RM D + PD+V
Sbjct: 888 HQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM---------------VDCGVPPDIV 931
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +L+ + + + + + L+K+ + TY + ++ M ++ K FR +
Sbjct: 932 TYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSL 991
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
+ G + A+ Y ++ G EA M++ G + + +Y E
Sbjct: 992 TRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDE 1040
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 73/406 (17%), Positives = 157/406 (38%), Gaps = 38/406 (9%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F ++ +S PS + + + +Y+ V F ++M G + ++ +L+ F
Sbjct: 52 LFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFC 111
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPL 454
+++ A++ + M + G + + L C R DA LV +KS +P
Sbjct: 112 RCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS--GYEPN 169
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ + LI G ++ + + M K ++ T N +L + + +A +
Sbjct: 170 VVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARIL 229
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
+ T+ + PD +T++++++A + + +YK M S +
Sbjct: 230 RDMTKRR-------------INPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
+ L+ G+ + + FD + G P+ + + ++ E + L
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336
Query: 633 MAYAPFHITERQWTELF----ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALH 688
M + L + + R+++D + + + +C IT L LH
Sbjct: 337 MYREGLVGDTFTYNTLIHGYCQVGKLRVAKD----IFSWMVSCGVTPDIITHCIL---LH 389
Query: 689 ALCRSE-------KERDL-SSSAHFGSQAIDISPLHGIHEAFDVKE 726
LC + K D+ S + G A +I +HG+ +A V+E
Sbjct: 390 GLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIM-IHGLCKADKVEE 434
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 182/445 (40%), Gaps = 44/445 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL +G A+ VLD + K + +Y +L ++G ++R+ M
Sbjct: 117 VVRGLCTRGRIADALEVLDEM-SFKGCAPIPP--MYHVILEAACRSGGFRNSVRVLEAMH 173
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C L D + V + + G + E V L+ ++ E D+
Sbjct: 174 AKGCTL--DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGC---------------EADI 216
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YNAVL + +W V + ++ + P+ T+ + + ++G ++ VHE +
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M++ G Y ++ +EG + A + M G+ Y + LC+ R
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 435 WQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
W++A ++ ++ + PL ++TF L+ G +D I + + M H C P++ T
Sbjct: 337 WKEAEELLSEM--FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ + + + +A L + + KP+ +Y+ +L+ +A +
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGC-------------KPNTVSYTIVLKGLCSAGR 441
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLF 609
W E + M GC + L+ + G L+E A + L L G P +
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG---LVEQAIELLKQMLVNGCSPDLIS 498
Query: 610 FTEMLIQAIVQSNYEKAVALINAMA 634
++ ++ E+A+ L+N M
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMV 523
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 156/407 (38%), Gaps = 75/407 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAG---RPHEALRIF 251
+LKGL W ++D + + D V + L+ L + G R HE L
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMV----RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA-- 275
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ + PDI Y ++ + + G L+ +++ RM PS +K
Sbjct: 276 --QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM---PSYGLK------------ 318
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P++V YN VL + +WK + ++ + T+ + ++ Q+G D V E
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M G +TY ++ F +EG I+EAV +++M G Y + LC+
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
GRW DA E++ S Q ++ C PN T
Sbjct: 439 AGRWVDA----EELMS-------------------------------QMIQQGCPPNPVT 463
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ + + +A EL ++ S PD +YS++++ A
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCS-------------PDLISYSTVIDGLGKAG 510
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
+ E + M G + ++ + SR G+ + + FD++
Sbjct: 511 KTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 143/347 (41%), Gaps = 34/347 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+KGL G A+SVLD + G + D+ V ++ L K GR +A++
Sbjct: 178 LVKGLCKAGRVGDALSVLDGMSG--PESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEER 235
Query: 255 LEDCN-LYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKRIKNM--------- 301
+ + P+ Y+ +A G VG+ ELV +E+ R P+ N
Sbjct: 236 MRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVG 295
Query: 302 -----------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R W P + V Y+ ++ A + ++ +F ++ G P A
Sbjct: 296 RVGAALEFFREKRTVW-PEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAI 354
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + + Q+G+ D M K+G + A Y +L+ F ++NEA + M
Sbjct: 355 MYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEM 414
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL--RHSKPLEITFTGLIISSMDG 468
++ G+ Y L LC G D + V E + + +P +TF LI
Sbjct: 415 KEAGLQPDVYTYNTLLSGLCKAG---DFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKV 471
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G ID+ + IF+ M + +PN N ++ ++ S A ELF+E
Sbjct: 472 GQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDE 518
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 174/455 (38%), Gaps = 68/455 (14%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQV 277
++D + Y L+ L KAGR +AL + + M + ++ PD+ +++ L +
Sbjct: 163 MRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKT 222
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G L++ VK +E +R++++H P+ V YN + +A + +
Sbjct: 223 GRLQQAVKFVE-------ERMRSVHG------CAPNTVTYNCLAHAFCRAGNVGMACELV 269
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR-KMAKSGEAIG-ALTYKVLVRAFW 395
++ K + P+A T + + G+ EFFR K EA G A+TY LV AF
Sbjct: 270 AKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFL 329
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ A+ M G A +Y+ + L GR DA + +K
Sbjct: 330 HTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMK--------- 380
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
K + + N ++ + R ++A EL E
Sbjct: 381 --------------------------KAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEM 414
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
A L+PD YTY+++L A + + + M GC+
Sbjct: 415 KEAG-------------LQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTF 461
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM-- 633
L+ + G+ F S+ E+G P+ + + ++ + A+ L + M
Sbjct: 462 GTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMRE 521
Query: 634 AYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
+ P ++T + L + D+ +K +L++ +
Sbjct: 522 KHVPANVT--TFNALLKGLRDKNMPEKAFELMDLM 554
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 22/254 (8%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A+ +F+ M+++ N PD Y ++ L Q G L + + M++
Sbjct: 337 AMELFHEMVDEGN-SPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAG------------ 383
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+ D YN ++ + + + +++++GL+P TY + + ++G +
Sbjct: 384 ---FQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFL 440
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
V E KM G +T+ L+ + + G+I+EA+ R+M++ G+ +Y L
Sbjct: 441 AVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLI 500
Query: 427 CCLCNNGRWQDAMLVVEKIKSLR--HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 483
LC + +D L +E +R H TF L+ D + + M++
Sbjct: 501 DFLCKS---RDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREG 557
Query: 484 HCEPNIGTVNAMLK 497
C P+ T++ +++
Sbjct: 558 RCTPDYVTIDILME 571
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 131/310 (42%), Gaps = 35/310 (11%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
RP A+R+F + + D+ ++S+ LG+ R K + ++ +
Sbjct: 142 RPDIAVRLFLSLHRSHRVVQDLPLFNSLLDALGK-----------SRHASKAASLVRALE 190
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
R+ PD+V YN + + + + +Q+ +SG+ P+ TY + ++ ++
Sbjct: 191 RR-----FPPDVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRA 245
Query: 363 GKYDLVHEFFRKMAKSGEA-----IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
G+ FF +M K G ++Y ++ G++++A M + G
Sbjct: 246 GQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTP 305
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
+ + Y L +C G +DA+ V + + + P +T+T LI G ID + +
Sbjct: 306 SVATYNALIQVICKKGNVEDAVTVFDDMVR-KDYMPNVVTYTVLIRGLCHVGKIDRAMKL 364
Query: 478 FQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
+ MK + CEP + T N +++ KA LFE ++ G P+
Sbjct: 365 MERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERMSK------------GEDCLPN 412
Query: 537 EYTYSSMLEA 546
+ TY+ ++ A
Sbjct: 413 QDTYNIIISA 422
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 83/218 (38%), Gaps = 42/218 (19%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D +PD+V Y +++ + Q +F ++ K G PS ATY ++V+ + G +
Sbjct: 265 DESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVE 324
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F M + +TY VL+R GKI+ A+ + M+ G
Sbjct: 325 DAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEG------------ 372
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--DH 484
+P+ T+ LI S + G I+ + +F+ M +
Sbjct: 373 ------------------------CEPVVQTYNVLIRYSFEEGEIEKALCLFERMSKGED 408
Query: 485 CEPNIGTVN----AMLKVYSRNDMFSKAKELFEETTRA 518
C PN T N AM DM + A+ + E R
Sbjct: 409 CLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVERG 446
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 133/312 (42%), Gaps = 27/312 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+R+ + L D + T++ +R M +SG+ T+ +LKG G +
Sbjct: 190 ERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQ 249
Query: 208 QAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDI 264
A + + G KD+ YT ++ LG AG+ +A ++F+ M E C P +
Sbjct: 250 HAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCT--PSV 307
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
A Y+++ + + G +++ V + + +M RK++ P++V Y ++
Sbjct: 308 ATYNALIQVICKKGNVEDAVTVFD-----------DMVRKDY----MPNVVTYTVLIRGL 352
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-G 383
+ + ++++ G +P TY + + + G+ + F +M+K + +
Sbjct: 353 CHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERMSKGEDCLPN 412
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVR---NMEQRGVVGTASVYYELACCLCNNGRWQ---D 437
TY +++ A + + + A R M +RG + + + L G Q D
Sbjct: 413 QDTYNIIISAMFVRKRAEDMATAARMVMEMVERGYLPRRFMLNRVLNGLMLTGNQQISRD 472
Query: 438 AMLVVEKIKSLR 449
+ + EK + LR
Sbjct: 473 LLRMQEKYRRLR 484
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 156/385 (40%), Gaps = 35/385 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ RL ER K V + + ++ + L+ GL +A+ + W + L
Sbjct: 436 VIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIEL--W-FKLA 492
Query: 221 DKRDLKSRFVYTK-LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ L + V + LL L + G E + MLE L D +Y+++ + G
Sbjct: 493 AVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEK-GLLLDRISYNTLIFGCCKWGK 551
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
++E KL E M Q+ +PD YN ++ + V + +
Sbjct: 552 IEEAFKLKEEMVQQE---------------FQPDTYTYNFLMKGLADMGKIDDVHRLLHE 596
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ G P+ TY L +E ++ + + +FF+ + + ++ Y +L+ A+ G
Sbjct: 597 AKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGN 656
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ EA M+ RG++ T + Y L +C GR +A + E++++ P +T
Sbjct: 657 VTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRN-EGLLPNVFCYT 715
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI G +D SI M + PN T M+ Y + +A+EL E R
Sbjct: 716 ALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRN 775
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSM 543
+ PD TY+++
Sbjct: 776 G-------------IAPDTVTYNAL 787
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL+ L KA H++ +F+L + + PD+ + + + G + + V L +M
Sbjct: 227 LLSSLVKANELHKSYEVFDLACQ--GVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGL 284
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ P++V YN V++ S +++ ++ +S + PS TYG
Sbjct: 285 G---------------VFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYG 329
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + +++ ++ +E +M G A + + L+ + +G + EA+ M +
Sbjct: 330 VLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMK 389
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
G+ + L C + + + A V+ I S
Sbjct: 390 GMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILS 423
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 68/402 (16%), Positives = 150/402 (37%), Gaps = 46/402 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F +T + K GR +A+ +F M E ++P++ Y++V L + G +E ++ +
Sbjct: 256 FTFTTAINAFCKGGRVGDAVDLFCKM-EGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKD 314
Query: 289 RM---RQKPS-----------KRIKNMHRKN------WDPVLEPDLVVYNAVLNACVPSH 328
RM + PS +++ N + P+ VV+NA+++
Sbjct: 315 RMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKG 374
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
V ++ G+KP+ T+ ++ +S + + + + SG ++
Sbjct: 375 DMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCS 434
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
++ E A+ V + + + S+ L LC +A+ + K+ ++
Sbjct: 435 YVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAV 494
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM------KDHCEPNIGTVNAMLKVYSRN 502
+ +T L+ + G++++ + + M D N + K
Sbjct: 495 KGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNT-LIFGCCKWGKIE 553
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLK------------------PDEYTYSSML 544
+ F +E+ ++ + ++ Y FL A + P+ YTY+ +L
Sbjct: 554 EAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLL 613
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
E A + E +K + +L + L+ R G
Sbjct: 614 EGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIG 655
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/451 (18%), Positives = 186/451 (41%), Gaps = 55/451 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L++ L +GS V W +K++++ +R +Y ++ + + R +A +F
Sbjct: 120 LIRELTQRGSIEHCNLVFSW---MKNQKNYCARTDIYNMMIRLHARHNRTDQARGLF-FE 175
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
++ C PD Y+++ G+ G + + +++ M + + P
Sbjct: 176 MQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR---------------AAIPPSR 220
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN ++NAC S WK V K++ +G+ P T+ + + +Y +F
Sbjct: 221 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFEL 280
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG-------VVGTASVYYELAC 427
+ + T+ +++ + + ++AV +M+++ V T+ ++ C
Sbjct: 281 IKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVC 340
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-E 486
N M++ E + KP +++ L+ + G ++ + +F +K +
Sbjct: 341 GHIENCEAAFNMMLAEGL------KPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFR 394
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P++ + ++L Y R+ KA+E+F+ R N LKP+ +Y+++++A
Sbjct: 395 PDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNN-------------LKPNIVSYNALIDA 441
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP- 605
+ E + + M + LL R G+ + D++L A E+
Sbjct: 442 YGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQ----KVKIDTVLSAAEMRG 497
Query: 606 ---HPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ + + + I Y+KA+ L N+M
Sbjct: 498 IKLNTVAYNSAIGSYINVGEYDKAIDLYNSM 528
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/490 (20%), Positives = 200/490 (40%), Gaps = 60/490 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+W++A++V + DL + + +L + +AL F L +
Sbjct: 226 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI---MLTAFKSGTQYSKALSYFEL-I 281
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM-------------- 301
+ ++ PD ++ + L ++ + V + M++K S+ ++
Sbjct: 282 KGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCG 341
Query: 302 HRKNWDPV--------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
H +N + L+P++V YNA+L A VF +++++G +P +Y
Sbjct: 342 HIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYT 401
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ +S K E F+ + ++ ++Y L+ A+ G + +A+ +R MEQ
Sbjct: 402 SLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQD 461
Query: 414 GV-VGTASVYYELACC-LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+ S+ LA C C D +L +++ ++ + + + I S ++ G
Sbjct: 462 KIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNT---VAYNSAIGSYINVGEY 518
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE---------------- 514
D I ++ M K + + T ++ + F +A EE
Sbjct: 519 DKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSI 578
Query: 515 ----TTRANSSGY------TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
+ +A++ G TF PD TY++ML+A A +WE +++ M
Sbjct: 579 ICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEME 638
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP-HPLFFTEMLIQAIVQSNY 623
+ +LD A L+ ++ G+ + S+ E +IP F EM+ + ++
Sbjct: 639 ENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMREK-DIPLSDTIFFEMVSACGLLHDW 697
Query: 624 EKAVALINAM 633
+ AV +I M
Sbjct: 698 KTAVDMIKYM 707
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 123/301 (40%), Gaps = 50/301 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKA----GRPHEALRIF 251
L+ G + +A+S ++ + LK S+ VY+ ++ K G+ EA F
Sbjct: 543 LISGCCKMSKFGEALSFMEEMMHLKLPM---SKEVYSSIICAYSKQASALGQIIEAESTF 599
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK-------RIKNMHRK 304
NLM + PD+ Y ++ ++L L E M + K + K
Sbjct: 600 NLM-KSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNK 658
Query: 305 NWDP---------VLEPDL----VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
P + E D+ ++ +++AC H WK + K + S S+
Sbjct: 659 GGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYMEPSLPVISSGC 718
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF-----WEEGKINEAVAA 406
L + + +SGK +++ + F KM SG + TY +L++ W + + +VAA
Sbjct: 719 LNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLKNLLSSGNWRKYLEDNSVAA 778
Query: 407 VRN----------------MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
V ME G+ + +Y +++ N G ++A ++ E+++SL+
Sbjct: 779 VMCFLLSKQLAMDARVLQWMEDAGIHPSNEMYRDISFSQKNCG-VENAAVIKERLESLKR 837
Query: 451 S 451
+
Sbjct: 838 N 838
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
F ++ G P TY ++ + K++ ++ F +M ++ + + L+RAF
Sbjct: 598 TFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFN 657
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ G+ ++ ++M ++ + + ++++E+ AC L ++ W+ A V+ IK + S P
Sbjct: 658 KGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHD--WKTA---VDMIKYMEPSLP 712
Query: 454 -LEITFTGLIISSMD-GGHIDDCISI-FQHMKDHCEPNIGTVNAMLK 497
+ L ++S+ G I+ + + F+ + E N T + +LK
Sbjct: 713 VISSGCLNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLK 759
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 186/447 (41%), Gaps = 50/447 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL G R+A+ D V D S Y L+ L K G AL++ +
Sbjct: 140 LIKGLCLNGKVREALHFHDDVIAKGFHLDQVS---YGTLINGLCKTGETRAALQVLR-KI 195
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P++ Y+++ +L + L+ L M KRI PD+V
Sbjct: 196 DGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMI---VKRI------------FPDVV 240
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y ++ C+ + K +F Q+ +KP T+ + ++ + + G+ M
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM 300
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G +TY L+ ++ + N+A M +RGV Y + LC
Sbjct: 301 IKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMV 360
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNA 494
+A+ + +++ S + P +T+ LI + G I D + M + +P ++ T ++
Sbjct: 361 DEAVNLFKEMHS-KSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSS 419
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+L +N KA L T+ G ++P+ YTY+ +++ + +
Sbjct: 420 LLDALCKNHQVDKAITLI---TKIKDQG----------IQPNIYTYTILVDGLCKNGRLK 466
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL-------EAGEIPHP 607
+ VY+ + + G LD + ++ G C E FD L + G IP
Sbjct: 467 DAQAVYQDLLIKGYHLDVKMYNVMV-----NGLCK--EGLFDEALSLVSKMEDNGCIPDA 519
Query: 608 LFFTEMLIQAIVQSN-YEKAVALINAM 633
+ + E L++A+ +++ +KAV L+ M
Sbjct: 520 VTY-ETLVRALFENDKNDKAVKLLREM 545
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 61/275 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ GL +G ++A +VL + K+ + S V Y L+ + ++A +FN M
Sbjct: 280 LVDGLCKEGEMKKARNVL----AVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTM 335
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKN------ 305
+ PD+ +Y + L + ++ E V L + M K P+ N
Sbjct: 336 ARR-GVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394
Query: 306 ----WDPVLE-------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
WD V E D++ Y+++L+A +HQ + +++ G++P+ TY +
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454
Query: 355 AMEVMLQSGK-----------------------------------YDLVHEFFRKMAKSG 379
++ + ++G+ +D KM +G
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
A+TY+ LVRA +E K ++AV +R M +G
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 146/330 (44%), Gaps = 21/330 (6%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
E+ + L+D L + + MN+ G + LL+G G + + + M V
Sbjct: 107 ESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVY 166
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ +KD+ Y L+ K+ R +A+ +F+ M E N P Y ++
Sbjct: 167 N---EMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEM-EAKNCKPSPHIYCTLING 222
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
LG L E ++ E K S + P+ YNAV+ A S + V
Sbjct: 223 LGAEKRLSEALEFFEL--SKASGFV-------------PEAPTYNAVVGAYCWSERMDDV 267
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
++RK G+ PSA TY + + ++++GK + + F+KM+ G TY+++VR
Sbjct: 268 QRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRM 327
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
F E +++ A+ M+ +G++ ++ L LC+ + +A + +++ + P
Sbjct: 328 FCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPP 387
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKD 483
++ F+ L + +D G D + +F+ D
Sbjct: 388 AQL-FSNLKQNLLDEGK-KDTVVVFERKLD 415
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 98/226 (43%), Gaps = 19/226 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y L+ LG R EAL F L + P+ Y++V + ++ + I+
Sbjct: 215 IYCTLINGLGAEKRLSEALEFFELS-KASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDE 273
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR+ + P Y+ +L+ + + + K + VF+++ G +PS
Sbjct: 274 MRKGG---------------VGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSV 318
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+TY + + + + D+ + + +M G + L+ + E K++EA +
Sbjct: 319 STYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQE 378
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE-KIKSLRHSKPL 454
M G+ A ++ L L + G+ +D ++V E K+ LR + PL
Sbjct: 379 MLDVGIRPPAQLFSNLKQNLLDEGK-KDTVVVFERKLDKLRKA-PL 422
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 117/288 (40%), Gaps = 25/288 (8%)
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
++ G + S +Y +E + + +++++ M + G + T+ ++ R + K+
Sbjct: 31 KQKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKG-LLNKETFALISRRYARARKV 89
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
EAV A ME+ G+ +S L LC + + + A LV +K+ ++ ++T
Sbjct: 90 KEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIK-SYTI 148
Query: 461 LIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L+ ++ + ++ MKD EP++ T ++ + ++ + A ELF E N
Sbjct: 149 LLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKN 208
Query: 520 SSG-----YTFLSGDGAPLK-----------------PDEYTYSSMLEASATAHQWEYFE 557
T ++G GA + P+ TY++++ A + + + +
Sbjct: 209 CKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQ 268
Query: 558 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
M G + +L RAGK + F + G P
Sbjct: 269 RTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQP 316
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 158/409 (38%), Gaps = 67/409 (16%)
Query: 111 ENLRELKEMFEKDLNWVL---DDDVQLGSDYFAKNVEWHPEKRWRSEAEAI--RVLVDRL 165
ENLR L L + DD ++ D+F + +++WR +AI ++D L
Sbjct: 153 ENLRHLLRSLNPRLVCAVLRSQDDERIALDFF-----YWADRQWRYRHDAIVYYTMLDIL 207
Query: 166 SEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDL 225
S+ + + +R+M + G+
Sbjct: 208 SKTRLCQGARRILRLMTRRGIE-------------------------------------- 229
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+S ++ ++ +AG ALRI LM + + PD++ ++ L + L++ ++
Sbjct: 230 RSPEAFSYVMVSYSRAGMLRNALRILTLM-QKAGVEPDLSICNTAIYVLVKGNKLEKALR 288
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ERM+ +EPD+V YN ++ H+ + ++ G
Sbjct: 289 FLERMKVAG---------------IEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGC 333
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-GALTYKVLVRAFWEEGKINEAV 404
P +Y M + + K + V M ++ I +TY L+ A + G ++A+
Sbjct: 334 PPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDAL 393
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+R E++G Y + C N A +V + S + P +T+T +I
Sbjct: 394 VFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYS-KGCNPDVVTYTAIIDG 452
Query: 465 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
G ID+ + Q M H C+PN T +L N +A+E+
Sbjct: 453 FCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMI 501
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/257 (18%), Positives = 113/257 (43%), Gaps = 23/257 (8%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ ++K+G++P + A+ V+++ K + F +M +G ++Y L++ +
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYC 313
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ +I++A+ + M +G YY + LC + + ++ ++E + + P +
Sbjct: 314 DVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQ 373
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHMKD---HCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+T+ LI + GH DD + + ++ H + +G +A++ + +N KAK L
Sbjct: 374 VTYNTLIYALSKHGHADDALVFLREAEEKGFHID-KVG-YSAVVDSFCKNKNIDKAKSLV 431
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
+ + PD TY+++++ + + + + + M GC+ +
Sbjct: 432 IDMYSKGCN-------------PDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNT 478
Query: 573 TKHAWLLVEASRAGKCH 589
+ LL G CH
Sbjct: 479 VTYTVLL-----NGLCH 490
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 100/268 (37%), Gaps = 24/268 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
++ G G +A +L +Y K K V YT LL L G+ EA + N+
Sbjct: 449 IIDGFCRVGKIDEAKKMLQQMY----KHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVS 504
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E+ P+ Y +V L + G L E L M +K P+
Sbjct: 505 -EEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKG---------------FLPNP 548
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V N ++ + + G ++ G + + + Q G D
Sbjct: 549 VDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLED 608
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M S + A+TY L A ++ +++EA + M +G+ T Y + C GR
Sbjct: 609 MYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGR 668
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLI 462
D M ++EK+ + +P + + +I
Sbjct: 669 VDDMMKLLEKMIA---RQPFKTVYNQVI 693
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/460 (19%), Positives = 182/460 (39%), Gaps = 38/460 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L++G G ++ + +G ++ L + Y L+ K GR EA + M
Sbjct: 220 LIRGFCSVGELQKGLGC----FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 275
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ P++ +Y+ + L + G +KE +++E M K PD
Sbjct: 276 SSK-GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG---------------FTPDE 319
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN +LN + + ++ ++G+ PS TY + M ++ + EFF +
Sbjct: 320 VTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQ 379
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M G TY L+ F +G +NEA + M + G + Y C R
Sbjct: 380 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER 439
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
++A+ VV+++ + P ++++ +I G +D + Q M + P+ T +
Sbjct: 440 MEEALGVVQEMVE-KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 498
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
++++ ++A +L +E L PDE+TY++++ A
Sbjct: 499 SLIQGLCEMRRLTEACDLSQEMLDMG-------------LPPDEFTYTTLINAYCVEGDL 545
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
+++ M G D ++ L+ ++ + + L+ +P + + +
Sbjct: 546 NKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTY-DT 604
Query: 614 LIQAIVQSNYEKAVALINAMAY-APFHITERQWTELFESN 652
LI+ ++ VALI H +R + + E N
Sbjct: 605 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/380 (19%), Positives = 151/380 (39%), Gaps = 38/380 (10%)
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+A+ NL + P + +Y+SV + I R R + ++R+
Sbjct: 160 QAVNTINLA-KSSGFMPGVLSYNSV-------------LDAIVRSRGSVKLSAEEVYREM 205
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
+ P++ YN ++ + + F ++ ++G P+ TY ++ + G+
Sbjct: 206 IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRI 265
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
D + M+ G ++Y V++ EG + EA + M +G Y L
Sbjct: 266 DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 325
Query: 426 ACCLCNNGRWQDAMLV-VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
C G + A+++ E +++ P +T+T LI S +++ + F M+
Sbjct: 326 LNGYCKEGNFHQALVIHAEMVRN--GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 383
Query: 485 -CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
PN T ++ +SR + ++A + E T SG++ P TY++
Sbjct: 384 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTE---SGFS----------PSVVTYNAF 430
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLE 600
+ + E V + M G D ++ ++ R G+ L+ AF ++E
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE---LDRAFQMKQEMVE 487
Query: 601 AGEIPHPLFFTEMLIQAIVQ 620
G P + ++ LIQ + +
Sbjct: 488 KGVSPDAVTYSS-LIQGLCE 506
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 186/460 (40%), Gaps = 59/460 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V+++ L + W+ + M G E LL G +G++ QA+ ++
Sbjct: 289 VIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL----VIHAE 344
Query: 220 KDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + V YT L+ + KA + A+ F+ M L P+ Y ++ + G
Sbjct: 345 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RIRGLRPNERTYTTLIDGFSRQG 403
Query: 279 LLKELVKLIERMRQ---KPSKRIKN--MH---------------RKNWDPVLEPDLVVYN 318
LL E +++ M + PS N +H ++ + L PD+V Y+
Sbjct: 404 LLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYS 463
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+++ + F + +++ + G+ P A TY ++ + + + + ++M
Sbjct: 464 TIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 523
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G TY L+ A+ EG +N+A+ M +G + A Y L L R ++A
Sbjct: 524 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 583
Query: 439 MLVVEKIKSLRHSKPLEITFTGLI-----------ISSMDG----GHIDDCISIFQHM-- 481
++ K+ S P ++T+ LI ++ + G G + + +F+ M
Sbjct: 584 KRLLFKL-IYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVE 642
Query: 482 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
++H +P N ++ + R KA L++E SG+ P T
Sbjct: 643 RNH-KPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH---SGFV----------PHTVTVI 688
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
++++A E V G L C+L++ + A +LVE
Sbjct: 689 TLIKALFKEGMNEEMSEVI-GDTLRSCRLNEAELAKVLVE 727
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 177/423 (41%), Gaps = 40/423 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M ++ G G ++A+ L ++
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ + Y L+ L K GR EA ++F+ M + L P+I Y ++ G L
Sbjct: 300 VEPDVVT---YNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGAL 355
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M ++N + P+ V++ ++ A + VF ++
Sbjct: 356 VEMHGLLDLM-------VRNG--------IHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R+ GL P TYG + ++ +SG+ + +F +M + G + Y L+ + K
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEIT 457
++A + M RG+ + + C GR ++ EK+ L KP IT
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIIT 516
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
++ LI G +D+ + M +P+ T N ++ Y + A LF E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM- 575
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
SSG + PD TY+ +L+ + + +Y G+ SG QL+ + +
Sbjct: 576 --ESSG----------VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 577 WLL 579
+L
Sbjct: 624 IIL 626
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/489 (19%), Positives = 187/489 (38%), Gaps = 68/489 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M Q G + LLKGL D+
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A+ +L + D D V YT ++ K G +A ++ ML D + P++
Sbjct: 179 QEALELLQMMP--DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML-DRGILPNVV 235
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y S+ L + + + ++++ M +KN + P+ YN++++
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSM-------VKNG--------VMPNCRTYNSIVHGYC 280
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
S Q K K++ G++P TY M+ + ++G+ + F M K G
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
TY L++ + +G + E + M + G+ V+ L C G+ AMLV K+
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMF 505
+ + P +T+ +I G ++D + F+ M D
Sbjct: 401 RQ-QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--------------------- 438
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 565
L P Y+S++ + +W+ + + M
Sbjct: 439 --------------------------RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 625
G LD ++ + G+ E FD ++ G P + ++ ++ + ++
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532
Query: 626 AVALINAMA 634
A L+ +M
Sbjct: 533 ATKLLASMV 541
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 65/419 (15%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K G+ +A+ +F+ M + L PD Y +V L + G
Sbjct: 370 IH-----PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIGILCKSG 423
Query: 279 LLKELVKLIERM---RQKPSKRIKN--MHR----KNWDP-------VLEPDLVVYNAVLN 322
+++ ++ E+M R P + N +H WD +L+ + + N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483
Query: 323 ACVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+ + SH +G +F + + G+KP TY ++ +GK D + M
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G +TY L+ + + ++ +A+ R ME GV Y + G +Q
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL-----QGLFQTR 598
Query: 439 MLVVEK---IKSLRHSKPLEITFTGLIISSMDGGHI-DDCISIFQHMKDHCEPNIG---- 490
K + LE++ +I+ + ++ D+ + +FQ++ C ++
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL---CLTDLQLETR 655
Query: 491 ----TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+ A+LKV RND +AK+LF LS +G L PD TYS M E
Sbjct: 656 TFNIMIGALLKV-GRND---EAKDLFAA-----------LSANG--LVPDVRTYSLMAE 697
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 120/296 (40%), Gaps = 19/296 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TYG+ + +G+ DL + K G
Sbjct: 64 VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+ + L++ + + ++A+ V R M Q G + Y L LC+ R Q+A+
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183
Query: 441 VVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
+++ + P + +++T +I G +D + M D PN+ T ++++
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ KA E+ + + P+ TY+S++ ++ Q +
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNG-------------VMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
K M G + D + L+ + G+C FDS+ + G P + +L
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
>gi|255661018|gb|ACU25678.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 376
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 126/289 (43%), Gaps = 17/289 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + K F +++ + K G + + A++ + M + +GK + V
Sbjct: 21 VSPDAVVYNAMLNGFFKVGRIKDCFELWELMGKEGGR-NVASFNIMMRGLFDNGKVNEVI 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M KSG ++TY +LV + G IN+++ + E +G V A Y + L
Sbjct: 80 SIWELMKKSGFVEDSITYGILVHGLCKNGDINKSLHMLEIAEVKGGVLDAFAYSAMINWL 139
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C + + A+ V+ + P + LI + +D I +FQ M + HC P
Sbjct: 140 CKDSKLDKAVSVLNGMIK-XGCMPNAHVYNALINGLVGASKFEDAIRVFQEMGNTHCSPT 198
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I T N ++ + + F +A +L +E G+ P TYS +++
Sbjct: 199 IITYNTLINGLCKAERFGEAYDLVKEMLE---KGWN----------PCVITYSLLIKGLC 245
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 596
+ E +++ + G + D H L+ GK L L FD
Sbjct: 246 LGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCSVGKTQLALSLYFD 294
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD Y+++ +VG +K+ +L E M ++ + + + +N ++
Sbjct: 23 PDAVVYNAMLNGFFKVGRIKDCFELWELMGKEGGRNVAS----------------FNIMM 66
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ + V +++ ++KSG + TYG+ + + ++G + G
Sbjct: 67 RGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGLCKNGDINKSLHMLEIAEVKGGV 126
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+ A Y ++ ++ K+++AV+ + M + G + A VY L L +++DA+ V
Sbjct: 127 LDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMPNAHVYNALINGLVGASKFEDAIRV 186
Query: 442 VEKIKSLRHSKPLEITFTGLI 462
+++ + H P IT+ LI
Sbjct: 187 FQEMGN-THCSPTIITYNTLI 206
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P+ VYNA++N V + +++ VF+++ + P+ TY + + ++ ++ ++
Sbjct: 162 PNAHVYNALINGLVGASKFEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDL 221
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
++M + G +TY +L++ K+ A+ + +G ++ L LC+
Sbjct: 222 VKEMLEKGWNPCVITYSLLIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCS 281
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIG 490
G+ Q A+ + + + P +T L+ G I + ++ + +++ +P+I
Sbjct: 282 VGKTQLALSLYFDMNRW-NCAPNLVTHNTLMZGFYKDGDIRNALATWARILRNGVQPDII 340
Query: 491 TVNAMLKVYSRNDMFSKA 508
+ N LK + S A
Sbjct: 341 SYNITLKGLCSCNRISGA 358
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/373 (17%), Positives = 157/373 (42%), Gaps = 30/373 (8%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+ + ++ G + E V L++RM + + P++V N ++
Sbjct: 137 PNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYR---------------PNVVTVNTLI 181
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
N + + ++ K G + + TYG + M +SG L + FRKM +
Sbjct: 182 NGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIK 241
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+ Y +++ + ++G +++A++ ME +G+ Y + LCN+GRW D +
Sbjct: 242 ASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKM 301
Query: 442 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 500
+ ++ R+ P +TF+ LI + G + + ++ M P+ T ++++ +
Sbjct: 302 LREMIG-RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFC 360
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ + +A ++ + + G +P+ TYS ++ + A + + ++
Sbjct: 361 KENRLGEANQMLD-----------LMVSKGC--EPNIVTYSILINSYCKAKRVDNGMRLF 407
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
++ G D + L+ ++GK ++ + F ++ G P + + +L
Sbjct: 408 CEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDN 467
Query: 621 SNYEKAVALINAM 633
+KA+ + M
Sbjct: 468 GELQKALEIFEKM 480
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 129/307 (42%), Gaps = 25/307 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL + G W +L + G + + + ++ L+ + K G+ EA ++N M+
Sbjct: 285 IIGGLCNDGRWDDGAKMLREMIG---RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV 341
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-----------------PSKRI 298
+ PD Y S+ + L E ++++ M K +KR+
Sbjct: 342 AR-GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRV 400
Query: 299 KNMHRKNWDPV---LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
N R + L D V YN ++ S + +F+++ G+ PS TYG+
Sbjct: 401 DNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGIL 460
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + +G+ E F KM KS +G Y +++ K+++A + ++ +GV
Sbjct: 461 LDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGV 520
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
Y + LC G +A ++ K+K P + T+ LI + + G + +
Sbjct: 521 KPDVLTYNVMIGGLCKKGSLSEADMLFRKMKE-DGCAPSDCTYNILIRAHLGGSGVISSV 579
Query: 476 SIFQHMK 482
+ + MK
Sbjct: 580 ELIEEMK 586
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 158/409 (38%), Gaps = 47/409 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL KG +A+ ++D + YG + + Y +L + K+G AL +F
Sbjct: 180 LINGLCLKGRVTEALVLIDRMVKYGCE-----ANEITYGPVLNRMCKSGNTALALDLFRK 234
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M E+ ++ + Y V +L + G L + + L M K K D
Sbjct: 235 M-EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIK---------------AD 278
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+V Y++++ +W + +++ + P+ T+ ++V ++ GK E +
Sbjct: 279 VVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYN 338
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+M G A +TY L+ F +E ++ EA + M +G Y L C
Sbjct: 339 EMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAK 398
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
R + M + +I S + +T+ L+ G ++ +FQ M P++ T
Sbjct: 399 RVDNGMRLFCEISS-KGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTY 457
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRA-----------------NSSGY-----TFLSGDG 530
+L N KA E+FE+ ++ N+S F S
Sbjct: 458 GILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSV 517
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+KPD TY+ M+ + +++ M GC + L+
Sbjct: 518 KGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 66/367 (17%), Positives = 131/367 (35%), Gaps = 62/367 (16%)
Query: 302 HRKNWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RK +D VL E ++ N ++N + F V + K G +P+
Sbjct: 81 RRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTI 140
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T+ + G+ +M + +T L+ +G++ EA+ + M
Sbjct: 141 TFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRM 200
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ G Y + +C +G A+ + K++ R K + ++ +I S G+
Sbjct: 201 VKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEE-RSIKASVVQYSIVIDSLCKDGN 259
Query: 471 IDDCISIFQHMK----------------DHCE--------------------PNIGTVNA 494
+DD +S+F M+ C PN+ T +A
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ V+ + +AKEL+ E + PD TYSS+++ ++
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMV-------------ARGIAPDTITYSSLIDGFCKENRLG 366
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ M GC+ + ++ L+ +A + F + G + + + L
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNT-L 425
Query: 615 IQAIVQS 621
+Q QS
Sbjct: 426 VQGFCQS 432
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ ++G+ + A +F M+ + P + Y + L G L++ +++ E+M
Sbjct: 422 YNTLVQGFCQSGKLNVAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ S+ I + +YN +++ + + + +F L G+KP
Sbjct: 481 QK--SRMILGIG-------------IYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVL 525
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + + + + G FRKM + G A TY +L+RA + +V + M
Sbjct: 526 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEM 585
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ RG AS ++ + ++GR L
Sbjct: 586 KMRGFAADAST-IKMVVVMLSDGRLDKTFL 614
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 175/423 (41%), Gaps = 40/423 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M ++ G G ++A+ L ++
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ + Y L+ L K GR EA ++F+ M + L P+I Y ++ G L
Sbjct: 300 VEPDVVT---YNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGAL 355
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M + + P+ V++ ++ A + VF ++
Sbjct: 356 VEMHGLLDLMVRNG---------------IHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R+ GL P TYG + ++ +SG+ + +F +M + G + Y L+ + K
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEIT 457
++A + M RG+ + + C GR ++ EK+ L KP IT
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIIT 516
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
++ LI G +D+ + M +P+ T N ++ Y + A LF E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM- 575
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
SSG + PD TY+ +L+ + + +Y G+ SG QL+ + +
Sbjct: 576 --ESSG----------VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 577 WLL 579
+L
Sbjct: 624 IIL 626
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/458 (19%), Positives = 173/458 (37%), Gaps = 67/458 (14%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLA 236
+R M Q G + LLKGL D ++A+ +L + D D V YT ++
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMP--DDGGDCPPDVVSYTTVIN 207
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
K G +A ++ ML D + P++ Y S+ L + + + ++++ M
Sbjct: 208 GFFKEGDLDKAYGTYHEML-DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM------ 260
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+KN + P+ YN++++ S Q K K++ G++P TY M
Sbjct: 261 -VKNG--------VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ + ++G+ + F M K G TY L++ + +G + E + M + G+
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
V+ L C G+ AMLV K++ + P +T+ +I G ++D +
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQ-QGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 477 IFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
F+ M D L P
Sbjct: 431 YFEQMIDE-----------------------------------------------RLSPG 443
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
Y+S++ + +W+ + + M G LD ++ + G+ E FD
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 597 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
++ G P + ++ ++ + ++A L+ +M
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 65/419 (15%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K G+ +A+ +F+ M + L PD Y +V L + G
Sbjct: 370 IH-----PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIGILCKSG 423
Query: 279 LLKELVKLIERM---RQKPSKRIKN--MHR----KNWDP-------VLEPDLVVYNAVLN 322
+++ ++ E+M R P + N +H WD +L+ + + N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483
Query: 323 ACVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+ + SH +G +F + + G+KP TY ++ +GK D + M
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G +TY L+ + + ++ +A+ R ME GV Y + G +Q
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL-----QGLFQTR 598
Query: 439 MLVVEK---IKSLRHSKPLEITFTGLIISSMDGGHI-DDCISIFQHMKDHCEPNIG---- 490
K + LE++ +I+ + ++ D+ + +FQ++ C ++
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL---CLTDLQLETR 655
Query: 491 ----TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+ A+LKV RND +AK+LF LS +G L PD TYS M E
Sbjct: 656 TFNIMIGALLKV-GRND---EAKDLFAA-----------LSANG--LVPDVRTYSLMAE 697
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 121/296 (40%), Gaps = 19/296 (6%)
Query: 325 VPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
V H + ++ ++G + P+ TYG+ M +G+ DL + K G
Sbjct: 64 VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFI 123
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A+ + +++ + + ++A+ V R M Q G + Y L LC++ R Q+A+
Sbjct: 124 VDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALE 183
Query: 441 VVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
+++ + P + +++T +I G +D + M D PN+ T ++++
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ KA E+ + + P+ TY+S++ ++ Q +
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNG-------------VMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
K M G + D + L+ + G+C FDS+ + G P + +L
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 111/280 (39%), Gaps = 38/280 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ Y ++ S + VF+QL G +P TY ++ + + G+ +
Sbjct: 87 PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL 146
Query: 372 FRKMAKSGEAI-GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F +M KSG + +TY L+ F GK++EA+ + M + G Y L C
Sbjct: 147 FGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFC 206
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNI 489
R DA ++ ++ + + P +TFT L+ + D + I M+ C P +
Sbjct: 207 KLARLDDAYDLLNQM-TRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 265
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N +L Y R + +A++ MLE
Sbjct: 266 YTYNTILDGYCRVNQLEEARKF-------------------------------MLEEMDC 294
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
F + +G+ C+++++ A LVE +R +C+
Sbjct: 295 PPNVVSFNIMIRGL----CKVNRSSEAMELVEEARRRRCN 330
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 143/347 (41%), Gaps = 32/347 (9%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
++D ++ + Y L++ L KA R EA + M+ PDI Y ++ +
Sbjct: 44 AVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS-GCIPDIFTYTTLITGFCKS 102
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+ +++ E++ + PD+V Y+ +++ + K +F
Sbjct: 103 KKSDDALRVFEQLVARG---------------FRPDVVTYSCLIDGLCKEGRLKEAIDLF 147
Query: 338 KQLRKSG-LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
++ KSG P+ TY + + GK D +MA++G + +TY L+ F +
Sbjct: 148 GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 207
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
++++A + M ++G+ + L LC R DA+ ++ +++ + P
Sbjct: 208 LARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRR-KSCSPTVY 266
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
T+ ++ +++ D C PN+ + N M++ + + S+A EL EE
Sbjct: 267 TYNTILDGYCRVNQLEEARKFMLEEMD-CPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 325
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
R + PD Y+++++ + + VY+ M
Sbjct: 326 RRRCN-------------PDVVMYTTVIDVLCREKKVDEACRVYRKM 359
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/323 (17%), Positives = 126/323 (39%), Gaps = 33/323 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ L + E ++ + + M SG + L+ G A+ V + +
Sbjct: 60 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 119
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ Y+ L+ L K GR EA+ +F M++ + P+ Y+S+ ++G +
Sbjct: 120 FRPDV---VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176
Query: 281 KELVKLIERMRQKPSKR------------------------IKNMHRKNWDPVLEPDLVV 316
E + L+ERM + S + M RK L P++V
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG----LTPNVVT 232
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+ ++++ ++ + ++R+ P+ TY ++ + + + +F +
Sbjct: 233 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM 292
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ +++ +++R + + +EA+ V +R +Y + LC +
Sbjct: 293 DCPPNV--VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVD 350
Query: 437 DAMLVVEKIKSLRHSKPLEITFT 459
+A V K+ P IT++
Sbjct: 351 EACRVYRKMLEEPGCLPNSITYS 373
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 147/357 (41%), Gaps = 61/357 (17%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
++V NAV+ A S + V F++L K G KP+A TY ++ ++++G L +F
Sbjct: 14 VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLD 73
Query: 374 KMAKSG-------------------------------EAIGA----LTYKVLVRAFWEEG 398
KM K+G +++G TY +L+R+
Sbjct: 74 KMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+ EA ME+RG +A Y + C GR + AM+V++K+ ++ P + T
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLD-KNLAPDDYTL 192
Query: 459 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET-- 515
LI + G + IF+ M K N + NAML + A + +E
Sbjct: 193 NSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEA 252
Query: 516 --TRANSSGY-TFLSGDG-----------------APLKPDEYTYSSMLEASATA-HQWE 554
+ NS + T ++ G A L PD +TY+ M+EA A A + +
Sbjct: 253 RGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGK 312
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
FE ++ M +GC + + L+ +AG+ + + + G +P + T
Sbjct: 313 AFE-MFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITAT 368
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 129/305 (42%), Gaps = 23/305 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y ++ L KAG A+ + M++ L PD Y+ V LG+ ++ E KL
Sbjct: 50 YTYKCVIQSLVKAGNVVLAMDFLDKMIKT-GLEPDTLLYNVVLDGLGKANMIDEACKLFA 108
Query: 289 RMRQK--PSKR------IKNMHRKNWDP------------VLEPDLVVYNAVLNACVPSH 328
M+ P+ I+++ R D P Y V++ +
Sbjct: 109 SMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAG 168
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ + V K++ L P T + + ++G+ +L E F +M KSG A+ +++
Sbjct: 169 RIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFN 228
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
++ + GK+ A + ME RG+ + + L CL +A V+++++S
Sbjct: 229 AMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSA 288
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
+ P T+T +I + G++ +F M K C N+ T N ++ + +
Sbjct: 289 GLT-PDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQD 347
Query: 508 AKELF 512
A++++
Sbjct: 348 ARDIY 352
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 27/290 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V++D L + M + K M G + L++ LG +A + D +
Sbjct: 89 VVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDE---M 145
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+++ S YT ++ I KAGR A+ + ML D NL PD +S+ + + G
Sbjct: 146 EERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKML-DKNLAPDDYTLNSLITAVSRTGR 204
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPV--------------------LEPDLVVYNA 319
+ ++ ERM++ D ++P+ + +N
Sbjct: 205 TELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNT 264
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++N + + V +++R +GL P TY +E ++G E F M K+G
Sbjct: 265 LINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAG 324
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG---TASVYYELA 426
+ +TY +L+ A + G+ +A +M+++G++ TA+V +LA
Sbjct: 325 CSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLA 374
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 176/429 (41%), Gaps = 54/429 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
++ G G +A+ +L G+ L ++ +++ L +GR EA +F
Sbjct: 277 IIMGFAKSGDPSRALQLL----GMAQATGLSAKTATLVSIISALANSGRTLEAEALFE-E 331
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKN 305
L + P AY+++ + G LK+ ++ M ++ P + ++ +
Sbjct: 332 LRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 391
Query: 306 WDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
W+ ++P+ V++ +L +W+ F V K+++ G+KP Y +
Sbjct: 392 WESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 451
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + D F +M G +T+ L+ + G+ A ME+RG
Sbjct: 452 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 511
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
+ A+ Y + + RW D ++ K+KS + P +T T L+ G +D
Sbjct: 512 CLPCATTYNIMINSYGDQERWDDMKRLLGKMKS-QGILPNVVTHTTLVDVYGKSGRFNDA 570
Query: 475 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----------------- 516
I + MK +P+ NA++ Y++ + +A F T
Sbjct: 571 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 630
Query: 517 ----RANSSGYT---FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
R ++ + ++ +G +KPD TY+++++A +++ VY+ M +SGC+
Sbjct: 631 FGEDRRDAEAFAVLQYMKENG--VKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCK 688
Query: 570 LDQTKHAWL 578
D+ + L
Sbjct: 689 PDRKARSML 697
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 155/383 (40%), Gaps = 45/383 (11%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A +V+ W+ K +Y+ L+ LG++ + +EA L+ + L P Y+
Sbjct: 152 AYAVVSWLQ--KHNLCFSYELLYSILIHALGRSEKLYEAF----LLSQKQTLTP--LTYN 203
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN-WDPV---------- 309
++ + +++ + LI RMRQ S I+++ R N D V
Sbjct: 204 ALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIE 263
Query: 310 ---LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
LE D+ + N ++ S + + +GL AT + + SG+
Sbjct: 264 RDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTL 323
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F ++ +SG Y L++ + + G + +A V ME+RGV Y L
Sbjct: 324 EAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLI 383
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 485
N GRW+ A +V++++++ +P F+ L+ D G + + MK
Sbjct: 384 DAYVNAGRWESARIVLKEMET-GDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGV 442
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
+P+ N ++ + + + A F+ R S G ++PD T++++++
Sbjct: 443 KPDRQFYNVVIDTFGKFNCLDHAMTTFD---RMLSEG----------IEPDRVTWNTLID 489
Query: 546 ASATAHQWEYFEYVYKGMALSGC 568
+ E +++ M GC
Sbjct: 490 CHCKHGRHIVAEEMFEAMERRGC 512
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 19/302 (6%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F++LR+SG+KP Y ++ +++G +M K G + TY +L+ A+
Sbjct: 328 LFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYV 387
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
G+ A ++ ME V + V+ L + G WQ V++++KS+ KP +
Sbjct: 388 NAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSI-GVKP-D 445
Query: 456 ITFTGLIISSMDGGH-IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
F ++I + + +D ++ F M + EP+ T N ++ + ++ A+E+FE
Sbjct: 446 RQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE 505
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
R P TY+ M+ + +W+ + + M G +
Sbjct: 506 AMERRGC-------------LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 552
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINA 632
H L+ ++G+ + + + G P + LI A Q E+AV
Sbjct: 553 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA-LINAYAQRGLSEQAVNAFRV 611
Query: 633 MA 634
M
Sbjct: 612 MT 613
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 123/293 (41%), Gaps = 24/293 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++PD + +N ++N + K +F ++ + G +P +Y + + +SG +
Sbjct: 158 IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMAL 217
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ RKM + G + Y ++ + ++ +N+A+ + M RG+ Y +
Sbjct: 218 QLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGF 277
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C+ G +A ++ ++ R+ P +TFT L+ G + + +F+ M K EPN
Sbjct: 278 CSLGHLNEATILFNEMVG-RNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPN 336
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSS-----------GYT-----------FL 526
T NA++ Y N+ +A+++ + + GY +
Sbjct: 337 AYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLV 396
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
L PD TYS++++ + + ++K M SG D ++ LL
Sbjct: 397 EMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L + GRP EAL +F M L PD+ Y ++ L + G L E +KL++ M
Sbjct: 410 YSTLMQGLCQVGRPQEALNLFKEMCSS-GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSM 468
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EPD+V+YN ++ + + + +F +L G++P+
Sbjct: 469 QESK---------------IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIR 513
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + ++ +L+ G D +E FRKM G + +Y V+++ F + + A+ + M
Sbjct: 514 TYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 173/450 (38%), Gaps = 37/450 (8%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+SVL ++ L + D + L+ G EA+ +FN M+ + PD+ +Y
Sbjct: 146 AISVLGKMFKLGIQPD---AITFNTLINGRCIEGEIKEAVGLFNEMVRRGH-QPDVISYS 201
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
+V L + G ++L+ +M +K K P+LV Y ++++
Sbjct: 202 TVINGLCKSGNTSMALQLLRKMEEKGCK---------------PNLVAYTTIIDSLCKDT 246
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ ++ G+ P TY + G + F +M +T+
Sbjct: 247 LVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFT 306
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+LV +EG ++EA M ++G A Y L C N + +A V++ I
Sbjct: 307 ILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD-IMVD 365
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSK 507
+ P+ ++ LI +D+ S+ M + P+ T + +++ + +
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE 425
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A LF+E SSG L PD TYS++L+ + + K M S
Sbjct: 426 ALNLFKEMC---SSG----------LLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
+ D + L+ AGK + + F L G P +T M+ + + ++A
Sbjct: 473 IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAY 532
Query: 628 ALINAM---AYAPFHITERQWTELFESNED 654
L M + P + + F N+D
Sbjct: 533 ELFRKMEDDGFLPNSCSYNVIIQGFLQNQD 562
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 19/263 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LVD L + M ++ M + G L+ G +A VLD +
Sbjct: 307 ILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI---M 363
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
DK Y L+ K R EA + M E L PD Y ++ L QVG
Sbjct: 364 VDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEK-ELTPDTVTYSTLMQGLCQVGR 422
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+E + L + M L PDL+ Y+ +L+ + K
Sbjct: 423 PQEALNLFKEMCSSG---------------LLPDLMTYSTLLDGLCKHGHLDEALKLLKS 467
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+++S ++P Y + +E M +GK ++ E F K+ G TY ++++ +EG
Sbjct: 468 MQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGL 527
Query: 400 INEAVAAVRNMEQRGVVGTASVY 422
+EA R ME G + + Y
Sbjct: 528 SDEAYELFRKMEDDGFLPNSCSY 550
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 111/282 (39%), Gaps = 28/282 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V + L + Q+ V + Q+ G+ + + + + + +
Sbjct: 90 PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K G A+T+ L+ EG+I EAV M +RG Y + LC
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
+G A+ ++ K++ + KP + +T +I S ++D + + M D P++
Sbjct: 210 SGNTSMALQLLRKMEE-KGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV 268
Query: 491 TVNAMLKVYSRNDMFSKAKELFEE----TTRANSSGYTFL-------------------- 526
T + +L + ++A LF E N+ +T L
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+ GA +P+ YTY+++++ +Q + + V M GC
Sbjct: 329 TKKGA--EPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC 368
>gi|357116849|ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Brachypodium distachyon]
Length = 737
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 190/485 (39%), Gaps = 45/485 (9%)
Query: 232 TKLLAILGKAGRPHEALRIFNLM--LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+L+ +G+ G P L +F M LE+ P A+ V LG+ + E+++++ R
Sbjct: 217 VELMKRMGEEGLPLRCLDLFRWMRVLEE---QPTPQAWLVALVVLGRARMADEVLEILGR 273
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + R + V+YNA ++ ++ + +F+ + K+ ++P
Sbjct: 274 LPHERQFR---------------EAVLYNAAMSGVAYCGRYDDAWTIFEFMEKNSVQPDH 318
Query: 350 ATYGLAMEVML-QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T + + VM Q EFF++M + G L++ F +EG EA+
Sbjct: 319 ITSSIMLNVMKKQKVSAKAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALIIQS 378
Query: 409 NMEQRGVVGTASVYYEL--ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
ME+RG+ S+Y E+ A C C+ + + V K K L KP +T+ L+ +
Sbjct: 379 EMERRGIPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEKGL---KPTIVTYNILMDAYS 435
Query: 467 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 525
+ S+ M D +PN + N ++ Y R S+ E +
Sbjct: 436 RRLQPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAE----------DAFLR 485
Query: 526 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 585
+ DG +KP +Y+S+L A A Q+E Y M + + LL RA
Sbjct: 486 MKADG--IKPTSSSYTSLLCAYAVNGQYEKAHITYVDMKKERLKPSLETYTALLDIFRRA 543
Query: 586 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 645
G L + S++ + F +L Y +A +I T +
Sbjct: 544 GDTDKLMETWRSMINEKVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNIGLPPTTMTY 603
Query: 646 TELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHF 705
L + KL +LL + +T S + ++A R RD S + ++
Sbjct: 604 NILMNTYAKGGQHYKLPQLLKEMSALELKPDSVTYSTM---IYAYARV---RDFSKAFYY 657
Query: 706 GSQAI 710
Q +
Sbjct: 658 HKQMV 662
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 173/428 (40%), Gaps = 61/428 (14%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G R A VL+ + L +R + +Y ++ + GR +A IF M E ++ PD
Sbjct: 259 GRARMADEVLEILGRLPHERQFREAVLYNAAMSGVAYCGRYDDAWTIFEFM-EKNSVQPD 317
Query: 264 -IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK--------RIK--------------- 299
I + + V Q K + +RM +K K IK
Sbjct: 318 HITSSIMLNVMKKQKVSAKAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALIIQ 377
Query: 300 -NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
M R+ + + +YN ++NA Q + +F ++++ GLKP+ TY + M+
Sbjct: 378 SEMERRG----IPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEKGLKPTIVTYNILMDA 433
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE-AVAAVRNMEQRGVVG 417
+ + ++V +M G A +Y L+ A+ + K++E A A M+ G+
Sbjct: 434 YSRRLQPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKP 493
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
T+S Y L C NG+++ A + +K R LE T+T L+ G D +
Sbjct: 494 TSSSYTSLLCAYAVNGQYEKAHITYVDMKKERLKPSLE-TYTALLDIFRRAGDTDKLMET 552
Query: 478 FQHMKDHCEPNIG----TVNAMLKVYSRNDMFSKAKELFEE---------TTRANSSGYT 524
++ M + +G T + +L ++ ++ +A+++ E T N T
Sbjct: 553 WRSMINE---KVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNT 609
Query: 525 FLSG-------------DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
+ G LKPD TYS+M+ A A + Y +K M SG D
Sbjct: 610 YAKGGQHYKLPQLLKEMSALELKPDSVTYSTMIYAYARVRDFSKAFYYHKQMVRSGQVPD 669
Query: 572 QTKHAWLL 579
+ LL
Sbjct: 670 AKSYKKLL 677
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 143/328 (43%), Gaps = 29/328 (8%)
Query: 160 VLVDRLSEREMTAKN-WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
++++ + +++++AK W+F + MN+ G+ ++ L+K D+G ++A+ + +
Sbjct: 323 IMLNVMKKQKVSAKAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALIIQSEM-- 380
Query: 219 LKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG-- 275
++R + S +Y +++ K + EA +F M E L P I Y+ +
Sbjct: 381 --ERRGIPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEK-GLKPTIVTYNILMDAYSRR 437
Query: 276 -QVGLLKELVKLIERMRQKPSKRIKN-----------MHRKNWDPVL-------EPDLVV 316
Q +++ L+ + + +P+ R N M K D L +P
Sbjct: 438 LQPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKPTSSS 497
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y ++L A + Q++ + ++K LKPS TY +++ ++G D + E +R M
Sbjct: 498 YTSLLCAYAVNGQYEKAHITYVDMKKERLKPSLETYTALLDIFRRAGDTDKLMETWRSMI 557
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+T+ +++ + G +A + G+ T Y L G+
Sbjct: 558 NEKVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNTYAKGGQHY 617
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+++++ +L KP +T++ +I +
Sbjct: 618 KLPQLLKEMSAL-ELKPDSVTYSTMIYA 644
>gi|414874087|tpg|DAA52644.1| TPA: hypothetical protein ZEAMMB73_282844 [Zea mays]
Length = 282
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 126/291 (43%), Gaps = 58/291 (19%)
Query: 580 VEASRAGKC------HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ ++A +C +LLEHA DS+LE GEIP TE + Q+I +Y + + L+N M
Sbjct: 44 IPLTKAPRCAEKENPYLLEHALDSILERGEIPDVQLITESICQSIAHRDYGRTLQLLNIM 103
Query: 634 AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 693
A I E +W L + N + S D LE L+ L + N ++ +L RAL + CR
Sbjct: 104 TQASIKIKEVEWDYLLQQNMHQFSIDALEGLIKYL-STNGTTNADPAVDLVRALQSQCRD 162
Query: 694 EKERDLSSSAHFGSQAIDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKT 753
+ +Q ++S HG + S S + E L L T
Sbjct: 163 DT----------STQQFELS-FHGSGNKY-----------SCSSLAELDQLTCKNL--CT 198
Query: 754 DVAVDIDSINHSSLSRQADADTEMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDY 813
D+ +D+ +D EM +S + +C D+ L ++H
Sbjct: 199 DIILDV-----------PGSDREMPQLGVSAL--------MCRDI-SLNGQRVENKH--- 235
Query: 814 LDKELAALYLSKQSQDNDVVDLQKSMNRVGGSRRSELPSASEILEAWKESR 864
EL+ L + Q + + + SMN G + E+PSAS+ILE W+ R
Sbjct: 236 ---ELSDLG-QRGPQVSAIDKVLDSMNSYGDNSYGEMPSASKILELWEHER 282
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 137/340 (40%), Gaps = 26/340 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL +G +A + D + D+ + Y LL +G+P EA+ IF M
Sbjct: 212 VINGLLREGQLDKAYCLFDE---MLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMC 268
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN--MHRKNWDPVL 310
D + PD+ Y+++ V L + G E K+ + M +K P I +H + L
Sbjct: 269 RD-GVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYL 327
Query: 311 ---------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+PD ++N ++ A F ++R+ GL P+ TYG
Sbjct: 328 VQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTV 387
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
M+ + + GK D F ++ G + ++ L+ K ++A M RG+
Sbjct: 388 MDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGI 447
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
+ L LC G A + + + + + IT+T LI G +D+
Sbjct: 448 CPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDV-ITYTTLIDGYCLDGKVDEAT 506
Query: 476 SIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+ + M D +PN T N ++ Y +N A LF +
Sbjct: 507 KLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQ 546
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/488 (19%), Positives = 193/488 (39%), Gaps = 85/488 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLED---CNLYPDIAAYHSVAVTLGQVGLLKELVK 285
F Y LL L R +AL + + M+ D PD+ +Y +V L + G L +
Sbjct: 168 FSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYC 227
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L + M D + P+ + YN +L+ S + K +F+++ + G+
Sbjct: 228 LFDEM---------------LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV 272
Query: 346 KPSAATYGLAMEVMLQSGK-------YD----------------------------LVHE 370
+P TY M + ++G+ +D +H+
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
M ++G + +L+ A+ + G ++EA+ A M Q+G+ Y + LC
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC 392
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI--ISSMDGGHIDDCISIFQHMKDHCEPN 488
G+ DAM +++ S P + F LI + + D + +++ + C PN
Sbjct: 393 RVGKVDDAMSQFDRLIS-EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGIC-PN 450
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANS-----------SGYT----------FLS 527
N +L + M ++AK +F+ R + GY L
Sbjct: 451 TIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLE 510
Query: 528 G---DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
G DG +KP+E TY++++ + E +++ MA G ++ +L +
Sbjct: 511 GMVLDG--VKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQ 568
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMAYAPFHITER 643
+ + + +++ G I P+ +++Q + Q+N + A+ + + + FH+ R
Sbjct: 569 TRRIAAAKELYLWMIKCG-IKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNR 627
Query: 644 QWTELFES 651
+ + ++
Sbjct: 628 TFNIMIDA 635
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/400 (18%), Positives = 149/400 (37%), Gaps = 32/400 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQL----RKSGLKPSAATYGLAMEVMLQSGKYDL 367
P+ YN +L ++ + + + + G P +Y + +L+ G+ D
Sbjct: 165 PNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDK 224
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
+ F +M G + +TY L+ + GK EA+ R M + GV Y L
Sbjct: 225 AYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMV 284
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
LC NGR +A V + + H KP + L+ G++ + M ++ +
Sbjct: 285 YLCKNGRSMEARKVFDSMVKKGH-KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQ 343
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P+ N ++ Y+++ M +A F + + L P+ TY ++++A
Sbjct: 344 PDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG-------------LHPNIVTYGTVMDA 390
Query: 547 SATAHQW-----EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
+ ++ + +G+ +G H + K E ++
Sbjct: 391 LCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACD-----KWDKAEELAVEMIGR 445
Query: 602 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL 661
G P+ +FF +L + +A + + M +T L + D+
Sbjct: 446 GICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEA 505
Query: 662 EKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSS 701
KLL + +E+T + + ++ C++ + D S
Sbjct: 506 TKLLEGMVLDGVKPNEVTYNTI---INGYCKNGRIEDACS 542
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 127/320 (39%), Gaps = 21/320 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G +G Q +LD + + D +++ L+ K G EA+ F+ M
Sbjct: 317 LLHGYATEGYLVQMHQLLDVMVRNGTQPD---HYIFNILIGAYAKHGMVDEAMLAFSKMR 373
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L+P+I Y +V L +VG + + + +R+ + L P+ V
Sbjct: 374 QQ-GLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG---------------LTPNGV 417
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
V+ +++ +W + ++ G+ P+ + + + + G F M
Sbjct: 418 VFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLM 477
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ +TY L+ + +GK++EA + M GV Y + C NGR
Sbjct: 478 VRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRI 537
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
+DA + ++ S + P + ++ ++ I ++ M K + IGT N
Sbjct: 538 EDACSLFRQMAS-KGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNI 596
Query: 495 MLKVYSRNDMFSKAKELFEE 514
+L+ +N+ A +F
Sbjct: 597 ILQGLCQNNCTDDALRMFHN 616
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV-AAVR 408
TY + + ++G DL ++ ++G A+T+ L++ + + ++A+ A+R
Sbjct: 97 CTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALR 156
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--LRHSKPLE-ITFTGLIISS 465
M G A Y L LC+ R Q A+ ++ + + R P + +++T +I
Sbjct: 157 RMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGL 216
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ G +D +F M D PN T N +L Y + +A +F + R
Sbjct: 217 LREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCR------- 269
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
DG ++PD TY++++ + V+ M G + D + + LL +
Sbjct: 270 ----DG--VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYAT 323
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
G + D ++ G P F +LI A
Sbjct: 324 EGYLVQMHQLLDVMVRNGTQPDHYIF-NILIGA 355
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 128/290 (44%), Gaps = 11/290 (3%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K + A IF +ML + P+I Y ++ + G ++ ++ RM
Sbjct: 195 YTALIHAYLKTRKLSRANEIFEMMLSN-GCVPNIVTYTALIDGHCKAGETEKACQIYARM 253
Query: 291 RQ-KPSKRIKNMHRKNWDPVL-EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+ K +++ + D L EP++V Y A+++ +H+ K + + + G +P+
Sbjct: 254 KNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPN 313
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
Y ++ + GK D E F KM G + TY L+ +++ +++ A+ +
Sbjct: 314 QIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLT 373
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDA---MLVVEKIKSLRHSKPLEITFTGLIISS 465
M + +Y E+ LC G+ +A ML++E+ + P +T+T +I
Sbjct: 374 KMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE----KGCYPNVVTYTAMIDGF 429
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G +D C+ + Q M C PN T ++ + A +L EE
Sbjct: 430 GKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEE 479
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 141/356 (39%), Gaps = 61/356 (17%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL------------AMEVM 359
P +++N++++A S + + + K++ G +P Y + +MEV+
Sbjct: 9 PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVI 68
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
L + +M + G + + R GK +A +R M +G + +
Sbjct: 69 ------GLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDS 122
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
S Y ++ LCN + + A + +++K P T+T L+ G I+ + F
Sbjct: 123 STYSKVIGYLCNASKVEKAFQLFQEMKR-NGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181
Query: 480 HMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE------------------------- 513
M+ D C PN+ T A++ Y + S+A E+FE
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241
Query: 514 ETTRANSSGYTFLSGDGAPL---------------KPDEYTYSSMLEASATAHQWEYFEY 558
ET +A Y + D + +P+ TY ++++ AH+ +
Sbjct: 242 ETEKA-CQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARD 300
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + M+L GC+ +Q + L+ + GK + F +L G P+ ++ ++
Sbjct: 301 LLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI 356
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 102/249 (40%), Gaps = 50/249 (20%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT+++ L K G+ EA R+ LM+E+ YP++ Y ++ G+ G + ++L++
Sbjct: 386 IYTEMVDGLCKVGKTDEAYRLM-LMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQL 444
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP----------------------- 326
M K P+ + Y ++N C
Sbjct: 445 MTSKGCA---------------PNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHI 489
Query: 327 ----------SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
SH++ + +L + G P Y L ++ +++G+ ++ E +++
Sbjct: 490 GMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELS 549
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
S A TY L+ + K+++A +M +RG V S+ L L G+W+
Sbjct: 550 -SFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWE 608
Query: 437 DAMLVVEKI 445
+A+ + + I
Sbjct: 609 EALQLSDSI 617
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ L KA + EA + M LE C P+ Y ++ +VG L E ++ +
Sbjct: 282 YGALVDGLCKAHKVKEARDLLETMSLEGCE--PNQIIYDALIDGFCKVGKLDEAQEVFTK 339
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M P++ Y+++++ + V ++ ++ P+
Sbjct: 340 MLGHGC---------------SPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNV 384
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ + + GK D + M + G +TY ++ F + G+++ + ++
Sbjct: 385 VIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQL 444
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
M +G Y L C G DA ++E++K
Sbjct: 445 MTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMK 481
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 160/409 (39%), Gaps = 48/409 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ G G +A LD LK + K V + L+ L K R +AL +F M
Sbjct: 17 LIAGYCKAGDGDRA---LDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEM 73
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---------------------- 292
L L D+ +++ ++G+L++ +L+ M
Sbjct: 74 L-GAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGR 132
Query: 293 --KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K + NM + PD VVYN +++ + + + + + G+ P
Sbjct: 133 AAKALEVFSNMQKAGC----MPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + ++V+ G+Y+ + FF M + + +TY L+ + + +EA M
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 248
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ + + + L L GR +DA+ ++ + H P + LI G
Sbjct: 249 QANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHV-PNSYIYNALISGFCRSGQ 307
Query: 471 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+D +FQ M + C P+ T ++ +SR S A EL +E R G+T
Sbjct: 308 VDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR---EGHT----- 359
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
P TY+ ++ + + A Q E ++K M G D ++ L
Sbjct: 360 -----PALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/417 (17%), Positives = 163/417 (39%), Gaps = 36/417 (8%)
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR------------IKNM 301
M E C+ PD+ AY+++ + G + + R++Q+ S + + M
Sbjct: 1 MRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKM 60
Query: 302 HRKN---------WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
R L+ D+ V N +++ + + + TY
Sbjct: 61 SRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTY 120
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
M+ + ++G+ E F M K+G + Y VL+ ++GK++EA+ + +M +
Sbjct: 121 SYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNR 180
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+G++ Y + L + GR++ A +K +HS P +T+ L+ D
Sbjct: 181 KGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS-PDVVTYNTLLNGLKKLRRTD 239
Query: 473 DCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 531
+ +F M+ + C P++ T ++ ++ + ++ E++ R G+
Sbjct: 240 EACDLFDEMQANKCMPDLTTFGTLIDTLAKA---GRMEDALEQSARLVKMGHV------- 289
Query: 532 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 591
P+ Y Y++++ + Q + +++ M C D + L++ SR G +
Sbjct: 290 ---PNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMA 346
Query: 592 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
++ G P + ++ + E A L M F+ + ++ L
Sbjct: 347 MELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 99/530 (18%), Positives = 208/530 (39%), Gaps = 72/530 (13%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+R LV LS ++ + M++SG + L +G W A+
Sbjct: 36 YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL 95
Query: 211 SVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN-LYPDIAAYH 268
+++ + D K + T +++ L +A EA+ + M CN P++ Y
Sbjct: 96 DMIE-------REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM--RCNSCIPNVVTYR 146
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +++ + KRI NM P+ ++N+++++
Sbjct: 147 TL------------LSGFLKKKQLGWCKRIINMMMTEG---CNPNPSLFNSLVHSYCNEK 191
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY------DLVHEFFRKMAKSGEAI 382
+ + + ++ G P Y + + + K DL + + +M + +
Sbjct: 192 DYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVL 251
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ R GK ++A ++ M ++G V S Y ++ LC+ + + A L+
Sbjct: 252 NKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 311
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR 501
+++K + P T+T LI S G I+ +F+ M+ C P + T A++ Y +
Sbjct: 312 QEMK-MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 370
Query: 502 -------NDMF----------------------------SKAKELFEE---TTRANSSGY 523
ND+F SKA E++ + T+ + S +
Sbjct: 371 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 430
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
F D L P+ TY ++++ AH+ ++ + M SGC+ + + L+
Sbjct: 431 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 490
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+AGK + F + + G +P +T ++ + + A+ +++ M
Sbjct: 491 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 10/289 (3%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ KA + +A IF+ M+ D P+ Y ++ L + G + + ++ ++
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Query: 291 RQKPSKRIKNMHRKNWDP-VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + D L P++V Y A+++ +H+ + + SG +P+
Sbjct: 420 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ ++GK D E F +M K G TY L+ +++G+++ A+ +
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK---PLEITFTGLIISSM 466
M + Y + LC G + A+ K+ SL K P +T+T LI
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKAL----KLLSLMEEKGCSPNVVTYTALIDGLG 595
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G ID + +F M + C PN T ++ + KA+ L E
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 644
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 95/246 (38%), Gaps = 49/246 (19%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ VY L+ KAG+ A +F L + C P + Y S+ + + G L +K+
Sbjct: 478 NHIVYDALIDGFCKAGKIDSAQEVF-LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 536
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +M + P++V Y A+++ + + + + + G
Sbjct: 537 LSQMLKDSCT---------------PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 581
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA--- 403
P+ TY ++ + ++GK DL + F +M++ G + +TY+VL+ G +++A
Sbjct: 582 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641
Query: 404 ------------------------------VAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+ + ME G V A VY L C G
Sbjct: 642 LGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAG 701
Query: 434 RWQDAM 439
R + AM
Sbjct: 702 RLEIAM 707
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/420 (17%), Positives = 151/420 (35%), Gaps = 61/420 (14%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L G+ +A ++ M+ PD + Y V L +++ L + M+
Sbjct: 263 LCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG--- 318
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ PD+ Y ++++ + + W+F+++R G P+ TY +
Sbjct: 319 ------------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 366
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
L++ + ++ F +M +G +TY LV + G I++A +
Sbjct: 367 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 426
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH-IDDCIS 476
+ Y+ C + RH+ + G ++ + H +D
Sbjct: 427 DSDFYFP-----CED----------------RHTLAPNVVTYGALVDGLCKAHKVDHAHE 465
Query: 477 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTFLS------ 527
+ M CEPN +A++ + + A+E+F + T+ S +T+ S
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525
Query: 528 GDGA--------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
DG P+ TY++M++ + E + M GC +
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ L+ +AGK L F + G P+ + + ++ +KA L+ M
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 28/267 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
++ GL G +A+ +L +++K + YT L+ LGKAG+ +L +F M
Sbjct: 555 MIDGLCRIGESEKALKLLSL---MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C+ P+ Y + L GLL + L+ M+Q W L+
Sbjct: 612 RKGCS--PNYVTYRVLINHLCAAGLLDKARLLLGEMKQT-----------YWPKYLQG-- 656
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y + S + + +++ G P A YG+ ++ ++G+ ++ E ++
Sbjct: 657 --YRCAIQG--FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 712
Query: 375 MAKSGEAIGALT--YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
M + ++ Y L++A ++ EA M +RG V SV+ L L
Sbjct: 713 MMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEV 772
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFT 459
+W +A+ + I H L +++T
Sbjct: 773 KKWDEALQLCYGIC---HEVGLLLSYT 796
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 27/239 (11%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V Q+ K P+ TY ++ + + G+ + + M + G + +TY L+
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ GKI+ ++ M ++G Y L LC G A L++ ++K K L+
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655
Query: 456 ------ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML-KVYSRNDMFSKA 508
F+ I+S+ I + M+ + I V ML +S+ A
Sbjct: 656 GYRCAIQGFSKSFIASL---------GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
EL +E SS +K D Y+S+++A A Q E +Y M G
Sbjct: 707 MELHKEMMEVPSS-----------VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRG 754
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 82/230 (35%), Gaps = 53/230 (23%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
L+ G +PS TY ++V+ +G+ DL ++M++SG + T A
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHA------ 84
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
LC GRW DA+ ++E+ K + T
Sbjct: 85 -----------------------------LCKEGRWADALDMIER----EDFKLDTVLCT 111
Query: 460 GLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
+I M+ + D+ +S M+ + C PN+ T +L + + K +
Sbjct: 112 HMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIIN----- 166
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+ +G P+ ++S++ + + Y + M GC
Sbjct: 167 ------MMMTEGC--NPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 155/383 (40%), Gaps = 40/383 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ KAG EA+ FN M ED PD A+ V +L + E + +
Sbjct: 1216 FTILVRRYVKAGLAAEAVHAFNRM-EDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSL 1274
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + EPD+VVY ++++ + VF +++ +G+ P+
Sbjct: 1275 KDR----------------FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVY 1318
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + ++ + +SG+ H+ F +M G A+T+ L+R + G+ + + M
Sbjct: 1319 TYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQM 1378
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
++ G A Y L C + ++A+ ++ +K + IS + G
Sbjct: 1379 KRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKL--GD 1436
Query: 471 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYS---RNDMFSKAKELFEETTRANSSGYTFL 526
++ +F MKD C PN T N ++++++ DM K ++ +E
Sbjct: 1437 VNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENE---------- 1486
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC-QLDQTKHAWLLVEASRA 585
++P+ TY ++ W +K M C + + +L + +A
Sbjct: 1487 ------IEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKA 1540
Query: 586 GKCHLLEHAFDSLLEAGEIPHPL 608
G+ E + ++ G + PL
Sbjct: 1541 GQLKKHEELVEKMVNRGFVTRPL 1563
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 52/281 (18%)
Query: 356 MEVMLQSGK---YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
ME++ +GK +DL + M I T+ +LVR + + G EAV A ME
Sbjct: 1182 MEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMED 1241
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
G KP +I F+ +I S
Sbjct: 1242 YG------------------------------------CKPDKIAFSVVISSLSKKRRAI 1265
Query: 473 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ S F +KD EP++ +++ + R S+A+ +F E A
Sbjct: 1266 EAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAG------------- 1312
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
+ P+ YTYS +++A + Q V+ M GC + L+ +AG+ +
Sbjct: 1313 IXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVL 1372
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ + G P + + ++ N E+AV ++N++
Sbjct: 1373 QVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSV 1413
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 147/335 (43%), Gaps = 33/335 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y L+ L + R EAL++ M C PD+ ++ V L + G + E KL++R
Sbjct: 242 IYQTLIHALCENNRVSEALQLLEDMFLMC-CEPDVQTFNDVIHGLCRAGRIHEAAKLLDR 300
Query: 290 M--RQKPSKRIKN---MH-----------RKNWDPVLEPDLVVYNAVLNACVPSHQWK-G 332
M R + + MH R + + P+ V+YN +++ V S +++
Sbjct: 301 MLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEA 360
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
++ + +G +P A T+ + ++ +++ G E +M +TY +L+
Sbjct: 361 KDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILIN 420
Query: 393 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 452
F ++G++ EA V +M +G+ Y L C LC +G ++A+ + ++ + K
Sbjct: 421 GFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSG-KGCK 479
Query: 453 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
P TF LI +++ +S++ M + N T N ++ + D +A +L
Sbjct: 480 PDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKL 539
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+E G PL D TY+ +++A
Sbjct: 540 VDEMLFR-----------GCPL--DNITYNGLIKA 561
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 105/520 (20%), Positives = 196/520 (37%), Gaps = 71/520 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+K + +A +L+D+L K ++ M GL+F E + ++K G G
Sbjct: 92 QKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPG 151
Query: 208 QAMSVLDWVYGLKD-KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
QA +L ++G+ KS Y +L IL P A +F ML + P +
Sbjct: 152 QATRLLLDMWGVYSCDPTFKS---YNVVLDILVDGDCPRVAPNVFYDMLSR-GVSPTVYT 207
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
+ V L V + L+ M + P+ V+Y +++A
Sbjct: 208 FGVVMKALCMVSEVDSACSLLRDMAKHGCV---------------PNSVIYQTLIHALCE 252
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+++ + + + +P T+ + + ++G+ + +M G + ALT
Sbjct: 253 NNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALT 312
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y L+ G+++EA A + + V +Y L +GR+++A ++
Sbjct: 313 YGYLMHGLCRMGQVDEARALLNKIPNPNTV----LYNTLISGYVASGRFEEAKDLLYNNM 368
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF 505
+ +P TF +I + G++ + + M EPN+ T ++ + +
Sbjct: 369 VIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRL 428
Query: 506 SKAKELFEETT----RANSSGYTFL--------------------SGDGAPLKPDEYTYS 541
+A E+ + N+ GY L SG G KPD YT++
Sbjct: 429 EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGC--KPDIYTFN 486
Query: 542 SMLEASATAHQWEYFEYVYKGMALSGC---------------QLDQTKHAWLLVEASRAG 586
S++ H+ E +Y M L G D + A+ LV+
Sbjct: 487 SLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFR 546
Query: 587 KCHLLEHAFDSLLEA----GEIPHPL-FFTEMLIQAIVQS 621
C L ++ L++A G + L F EML + I +
Sbjct: 547 GCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPT 586
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 129/314 (41%), Gaps = 26/314 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL KG A+ +L+ + KR + YT L+ K GR EA I N M
Sbjct: 383 MIDGLVKKGYLVSALELLNEMVA---KRFEPNVITYTILINGFCKQGRLEEAAEIVNSMS 439
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK-------RIKNMHRKNW-- 306
L + Y+ + L + G ++E ++L M K K + N KN
Sbjct: 440 AK-GLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKM 498
Query: 307 --------DPVLE---PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D LE + V YN +++A + + F + ++ G TY
Sbjct: 499 EEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGL 558
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + ++G + F +M G ++ +L+ GK+N+A+ +++M RG+
Sbjct: 559 IKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGL 618
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-C 474
Y L LC G Q+A + K++S +P IT+ LI G +D C
Sbjct: 619 TPDIVTYNSLINGLCKMGHVQEASNLFNKLQS-EGIRPDAITYNTLISRHCHEGMFNDAC 677
Query: 475 ISIFQHMKDHCEPN 488
+ +++ + PN
Sbjct: 678 LLLYKGVDSGFIPN 691
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/324 (18%), Positives = 132/324 (40%), Gaps = 24/324 (7%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPE---KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRI 180
N ++D V+ G Y +E E KR+ +L++ ++ + + V
Sbjct: 380 FNIMIDGLVKKG--YLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNS 437
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M+ GL L+ L G+ +A+ + + G K D+ + + L+ L K
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDI---YTFNSLINGLCK 494
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
+ EAL +++ M + + + Y+++ +++ KL++ M +
Sbjct: 495 NHKMEEALSLYHDMFLE-GVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGC----- 548
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
P+ D + YN ++ A + + +F+++ G+ P+ + + + +
Sbjct: 549 -------PL---DNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLC 598
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++GK + +F + M G +TY L+ + G + EA ++ G+ A
Sbjct: 599 RTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAI 658
Query: 421 VYYELACCLCNNGRWQDAMLVVEK 444
Y L C+ G + DA L++ K
Sbjct: 659 TYNTLISRHCHEGMFNDACLLLYK 682
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 151/375 (40%), Gaps = 44/375 (11%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
KL+KG + +A+ V++ + +K F Y +++ KA R A ++ + M
Sbjct: 117 KLIKGFFNMKKIEKAIQVMEIL----EKHGKPDVFAYNAVISGFCKADRVDHASKVLDRM 172
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PD+ Y+ + G L +++++++ + K P +
Sbjct: 173 KKR-GFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCK---------------PTV 216
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ Y ++ A + + ++ GL+P TY + + M + G D EF +
Sbjct: 217 ITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSR 276
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
++K+G G TY +L+R EGK + +M +G Y L LC +G+
Sbjct: 277 ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGK 336
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVN 493
+A V++ +K + P ++ LI + G +D I M P+I + N
Sbjct: 337 IDEAKNVLKVMKE-KALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYN 395
Query: 494 AMLKVYSRNDMFSKAKELFEETTRA----NSSGYTFL------SGD------------GA 531
++L +N +A +FE+ N+ Y L SGD
Sbjct: 396 SILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSN 455
Query: 532 PLKPDEYTYSSMLEA 546
+ PDE TY+S++
Sbjct: 456 GIDPDEITYNSLISC 470
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 107/269 (39%), Gaps = 16/269 (5%)
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
LN S ++ + + + G KP ++ K + + + K G
Sbjct: 83 TLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG 142
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ Y ++ F + +++ A + M++RG Y L C GR A+
Sbjct: 143 KP-DVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLAL 201
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 498
V++++ + KP IT+T LI +++ G ID+ + + M P+ T N ++
Sbjct: 202 RVMDQLLK-DNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
+ M +A FE +R + +G TY+ +L +WEY E
Sbjct: 261 MCKEGMLDRA---FEFLSRISKNGCV----------AGVSTYNILLRDLLNEGKWEYGEK 307
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ M + GC+ + ++ L+ R GK
Sbjct: 308 LMSDMLVKGCEPNPITYSTLITALCRDGK 336
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 130/363 (35%), Gaps = 70/363 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ +G A+ V+D + LKD + YT L+ G EA+++ + ML
Sbjct: 187 LIGNFCGRGRLDLALRVMDQL--LKDNCK-PTVITYTILIEATITQGGIDEAMKLLDEML 243
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS-------------------- 295
L PD Y+ V + + G+L + + R+ +
Sbjct: 244 SR-GLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKW 302
Query: 296 ----KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K + +M K EP+ + Y+ ++ A + V K +++ L P +
Sbjct: 303 EYGEKLMSDMLVKGC----EPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYS 358
Query: 352 YGLAMEVMLQSGKYDLVHEF-----------------------------------FRKMA 376
Y + + + GK DL EF F K+
Sbjct: 359 YDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLG 418
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ G A +Y L A W G A+ + M G+ Y L CLC +G
Sbjct: 419 EVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVD 478
Query: 437 DAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ L+V+ +S +P I++ +++ I D I + M + C PN T
Sbjct: 479 QAIELLVDMFES-EKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTL 537
Query: 495 MLK 497
+++
Sbjct: 538 LIQ 540
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 155/374 (41%), Gaps = 30/374 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY-- 217
VL+ + MT K ++ R M GL+ + ++ +LKGL + W+ A+ + + +
Sbjct: 337 VLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADS 396
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
GL D F Y L+ +A + EAL +F+ M + + P I Y+S+ + +
Sbjct: 397 GLPDV------FTYNNLIHWHCQAHKLREALNLFDRM-KKAGVKPSINTYNSLLMGYCKK 449
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + E VKL M + K P++V Y ++ + + + +
Sbjct: 450 GCMDEAVKLYSEMPMEGFK---------------PNVVTYITLMRGYIAKKDFDNAYALL 494
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+++++G+ + TY + + + + V + G +TY ++ F +
Sbjct: 495 DEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKA 554
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
G + A + M ++G+ Y C G A+ ++ ++ R +P +
Sbjct: 555 GMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRR-RGLQPDIVA 613
Query: 458 FTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+ LI G++ + + +KD PN N+++ Y +M + + +E
Sbjct: 614 YNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMI 673
Query: 517 R----ANSSGYTFL 526
+ A++S YT L
Sbjct: 674 KGGIVADTSTYTTL 687
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 129/331 (38%), Gaps = 36/331 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ YN +++ +H+ + +F +++K+G+KPS TY + + G D +
Sbjct: 399 PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKL 458
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCL 429
+ +M G +TY L+R + + + A A + M+Q GV Y L C+
Sbjct: 459 YSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICM 518
Query: 430 CNNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 486
+ D ML KS P +T+ +I + G + +++Q M++
Sbjct: 519 VDRVCEVDGML-----KSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLP 573
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTR-----------ANSSGY------------ 523
PNI T + + Y R A ++ + R A +G+
Sbjct: 574 PNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQL 633
Query: 524 -TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
L DG L P+ Y+S++ + + Y+ M G D + + L+
Sbjct: 634 LVILLKDG--LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGF 691
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
S+ G + ++ G IP FT +
Sbjct: 692 SKDGNVAFALELYSEMMAKGYIPDAFTFTAL 722
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 105/280 (37%), Gaps = 30/280 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+VDR+ E + K++ G + T ++ G G A +V ++
Sbjct: 518 MVDRVCEVDGMLKSFM------SEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQ---MR 568
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+K + YT + + G AL++ N + L PDI AY+++ Q G +
Sbjct: 569 EKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRR-GLQPDIVAYNALINGFCQEGNM 627
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++L+ + + L P+ VVYN+++ + K V ++ +
Sbjct: 628 SHALQLLVILLKDG---------------LAPNTVVYNSLITGYKNLNMMKEVSKFYESM 672
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
K G+ +TY ++ + G E + +M G A T+ L G I
Sbjct: 673 IKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDI 732
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+ A + M + V +Y L NG +D L
Sbjct: 733 DGAKKLLEEMRRLDVRPNVFIYNMLI-----NGYLRDCKL 767
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 60/320 (18%), Positives = 124/320 (38%), Gaps = 18/320 (5%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+++A+++AC+ + +F ++ + + P Y LA+ + + G R+M
Sbjct: 194 MFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREM 253
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G TY+ +V + G++ EA+ M G V L C
Sbjct: 254 KEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEV 313
Query: 436 QDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 493
+A+ L E +K P ++ + LI G + + M P+ ++
Sbjct: 314 GNALNLFKETLKD--GIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELS 371
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+LK + + A LFEE SG PD +TY++++ AH+
Sbjct: 372 LVLKGLLNDRRWKDAVCLFEEMA---DSGL-----------PDVFTYNNLIHWHCQAHKL 417
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
++ M +G + + LL+ + G + + G P+ + + +
Sbjct: 418 REALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITL 477
Query: 614 LIQAIVQSNYEKAVALINAM 633
+ I + +++ A AL++ M
Sbjct: 478 MRGYIAKKDFDNAYALLDEM 497
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 14/336 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD+V YN V+ + + + +++ SG S T+G+ ++ ++GK D
Sbjct: 173 LMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
++M G + Y L+R F + G+++ A + +RG A Y L
Sbjct: 233 GLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEP 487
C GR ++A + E + R +P T+TGLI G + + + M KD EP
Sbjct: 293 CKLGRLKEASEIFEFMME-RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE-EP 350
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGY-TFLSGDGAPLKPDEYT--- 539
N+ T N ++ ++ + + A E+ E TR ++ Y + L G A DE +
Sbjct: 351 NVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLL 410
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVEASRAGKCHLLEHAFDSL 598
Y + ++S T F + G+ G +L Q + LLVE AG +S
Sbjct: 411 YLMLKDSSYTDPDVISFNALIHGLC-KGNRLHQALDIYDLLVEKLGAGDIVTTNILLNST 469
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L++G++ + + + + + N + +I+
Sbjct: 470 LKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFC 505
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 167/444 (37%), Gaps = 40/444 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G D G + ++ D V ++ D Y L+ K GR EA IF M+
Sbjct: 253 LIRGFCDCGELDRGKALFDEVL---ERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMM 309
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P++ Y + L VG KE ++L+ M QK EP++V
Sbjct: 310 ER-GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE---------------EPNVV 353
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++N + + ++K +P TY + + G D + M
Sbjct: 354 TYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLM 413
Query: 376 AKSGEAIG--ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
K +++ L+ + ++++A+ + ++ G L +G
Sbjct: 414 LKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSG 473
Query: 434 RWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 490
AM E K + +SK P T+T +I G ++ + M+ P++
Sbjct: 474 DVNKAM---ELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVF 530
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
N +L + +A LFEE R +S PD +++ M++ S A
Sbjct: 531 DYNCLLSSLCKKGTLDQAWRLFEEMQRDDSF-------------PDVISFNIMIDGSLKA 577
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ E + GM+ +G D ++ L+ + G FD ++++G P
Sbjct: 578 GDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHIC 637
Query: 611 TEMLIQAIVQSNYEKAVALINAMA 634
+L I Q +K + +
Sbjct: 638 DSVLKYCISQGETDKLTEFVKKLV 661
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 332 GVFWVFKQLRKSG---------LKPSAA----TYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
G+ F Q+RK+G LK A Y + ++ + ++ ++ R+M ++
Sbjct: 112 GLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQN 171
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
++Y ++R F E ++ +A+ M+ G + + L C G+ +A
Sbjct: 172 SLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 439 MLVVEKIKSLRHSKPLE---ITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNA 494
M + +K ++H K LE I +T LI D G +D ++F + + + P T N
Sbjct: 232 MGL---LKEMKH-KGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+++ + + +A E+FE F+ G ++P+ YTY+ +++
Sbjct: 288 LIRGFCKLGRLKEASEIFE-----------FMMERG--VRPNVYTYTGLIDG 326
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 109/275 (39%), Gaps = 22/275 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++++L + + A + V +M + LL GL KG +A +L + L
Sbjct: 357 IIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLM--L 414
Query: 220 KDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL--GQ 276
KD + + L+ L K R H+AL I++L++E + + TL G
Sbjct: 415 KDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGD 474
Query: 277 VGLLKELVKLIERMRQKPSKRI-----------------KNMHRKNWDPVLEPDLVVYNA 319
V EL K I + P+ K + K L P + YN
Sbjct: 475 VNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNC 534
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+L++ + +F+++++ P ++ + ++ L++G M+ +G
Sbjct: 535 LLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAG 594
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ TY L+ F + G ++EA++ M G
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSG 629
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 132/355 (37%), Gaps = 23/355 (6%)
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
Q K VF+Q SG S A L M +++S +++ F+RKM ++ I ++
Sbjct: 53 QLKNAVSVFQQAVDSGGSLSFAGNNL-MATLVRSRNHEVAFSFYRKMLETDTFINFVSLS 111
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ F + K A + M +RG Y L LC N + A V ++ +
Sbjct: 112 GLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKA---VSLLREM 168
Query: 449 RHSK--PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT----VNAMLKVYSR 501
R + P +++ +I +G ++ + + M+ C ++ T ++A K
Sbjct: 169 RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 502 NDMFSKAKELFEETTRANSSGYTFLS---GDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
++ KE+ + A+ YT L D L + + +LE + Y
Sbjct: 229 DEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY-NT 287
Query: 559 VYKGMALSGCQLDQTKHAW----LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ +G C+L + K A ++E + D L G+ L ++
Sbjct: 288 LIRGF----CKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 615 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 669
+Q + N +IN + + EL + R LL LC
Sbjct: 344 LQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLC 398
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 138/321 (42%), Gaps = 22/321 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R A+ +L V G K + +Y ++ + K +EA +++ M+
Sbjct: 149 LINGLCKVGQARAALQLLRRVDG---KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 205
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + PD+ Y ++ VG LK+ + L +M + K PD+
Sbjct: 206 SE-GISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIK---------------PDVY 249
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+N +++ + K VF + K G+KP+ TY M+ + + + F M
Sbjct: 250 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTM 309
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
A+ G +Y +++ F + K++EA+ + M + ++ Y L LC +G+
Sbjct: 310 AQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKI 369
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAM 495
A+ +V+++ R P IT++ ++ + +D I++ +KD ++
Sbjct: 370 SYALKLVDEMHD-RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYN 428
Query: 496 LKVYSRNDMFSK--AKELFEE 514
L VY+ M K LF E
Sbjct: 429 LDVYAYTVMIQGFCVKGLFNE 449
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 121/315 (38%), Gaps = 47/315 (14%)
Query: 280 LKELVKLIERMRQKP--SKRIKNMHRKNWDP-VLEPDLVV--------YNAVLNACVPSH 328
L L+ ++ Q P N+ +K +DP V+ ++ Y ++N
Sbjct: 98 LNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVG 157
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
Q + + +++ ++P+ Y ++ M + + + + +M G + +TY
Sbjct: 158 QARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYS 217
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ F+ GK+ +A+ M + + L C +G+ ++ V +
Sbjct: 218 ALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK- 276
Query: 449 RHSKPLEITFTGLIISSMDG----GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRND 503
+ KP +T+ L MDG ++ SIF M + P+ + N M+ + +
Sbjct: 277 QGIKPNVVTYCSL----MDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIK 332
Query: 504 MFSKAKELFE----ETTRANSSGYTFL------SGD--------------GAPLKPDEYT 539
+A LF+ + N YT L SG G P PD T
Sbjct: 333 KVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVP--PDIIT 390
Query: 540 YSSMLEASATAHQWE 554
YSS+L+A HQ +
Sbjct: 391 YSSILDALCKNHQVD 405
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y ++ K + EA+ +F M C N+ P++ Y S+ L + G + +KL++
Sbjct: 321 YNIMINGFCKIKKVDEAMNLFKKM--HCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDE 378
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF--------WVFKQLR 341
M D + PD++ Y+++L+A +HQ VF+ L
Sbjct: 379 MH---------------DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLF 423
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
G Y + ++ G ++ KM +G A TY++++ + +++ + +
Sbjct: 424 VKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDEND 483
Query: 402 EAVAAVRNMEQRGVV 416
A +R M RG++
Sbjct: 484 MAEKLLREMIARGLL 498
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/531 (19%), Positives = 204/531 (38%), Gaps = 95/531 (17%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D + + + + +M G + L+KGL K +A + + L
Sbjct: 240 VLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 299
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY------PDIAAYHSVAVT 273
+ D Y L+ L + G+ + AL + ML D + Y PD+ +
Sbjct: 300 GCRPD---AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDI 356
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + G + E +L+E M Q+ +L D+V Y+ ++ H+
Sbjct: 357 LCKEGKVIEANELLEVMIQRGC-------------IL--DIVTYSTLIKGLCMEHRISEA 401
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA------LTY 387
W+F ++K G +P A TYG M+ + Q+G ++ + ++M G ++Y
Sbjct: 402 TWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISY 461
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-------- 439
+++ ++ + +EA M+ +G++ Y L C +G+W+ A
Sbjct: 462 SIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 521
Query: 440 ---------------LVVEKIKSLRHSKPLEI-----------TFTGLIISSMDGGHIDD 473
++ +K K + +K LE+ T T L+ I
Sbjct: 522 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISK 581
Query: 474 CISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL----------FEETTRANSSG 522
+F M K C PN+ T ++K ++ A EL + + N+
Sbjct: 582 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 641
Query: 523 YTFLSGDGAP-------------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
Y+ + DG + PD +Y+S++ + +W+ +Y++ M
Sbjct: 642 YSIII-DGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
G Q D T + L+ + GK + +++ G IP+ + +T ++
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 155/366 (42%), Gaps = 29/366 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D L ++ + K + ++ Q G + L+KGL K +A + +
Sbjct: 533 VLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLF---LKM 589
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-----PDIAAYHSVAVTL 274
+ + + L+ L ++G AL + ML D + Y P+ +Y + L
Sbjct: 590 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 649
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G E +L + M+ + PD++ Y ++++ S +WK
Sbjct: 650 CKCGREDEARELFKEMKALG---------------VIPDVISYTSLIHGFCRSGKWKDAK 694
Query: 335 WVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
++F ++ G++P T+ + ++++ + GK +E M + G +TY LV+
Sbjct: 695 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 754
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS-----LR 449
+I+EA M++ G + Y L LC G + A+ + +K+ S
Sbjct: 755 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 814
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA 508
+ KP I+++ +I G D+ +F+ MK PN+ + +++ + R+ A
Sbjct: 815 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 874
Query: 509 KELFEE 514
K LF E
Sbjct: 875 KHLFNE 880
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 169/419 (40%), Gaps = 52/419 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ +G+ +A +FN ML D + PD+ + L + G + E KL+E +
Sbjct: 496 YTTLIHGFCLSGKWEKAKCLFNEML-DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 554
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ +L D+V ++ H+ +F +++K G P+
Sbjct: 555 IQRGC-------------IL--DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVV 599
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG------ALTYKVLVRAFWEEGKINEAV 404
T M+ + QSG + E + M G A++Y +++ + G+ +EA
Sbjct: 600 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 659
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ M+ GV+ Y L C +G+W+DA + ++ + +P TF+ LI
Sbjct: 660 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI-GVQPDVTTFSVLIDM 718
Query: 465 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS--- 520
G + + + + M + C PN T ++K ND S+A +LF + +
Sbjct: 719 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 778
Query: 521 --SGYTFLSG-----------------------DGAPLKPDEYTYSSMLEASATAHQWEY 555
+ T + G G KPD +YS +++ + +
Sbjct: 779 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 838
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++K M G + + L+ R+GK +H F+ +++ G + + ++ M+
Sbjct: 839 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 897
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 143/364 (39%), Gaps = 32/364 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L R EA +F + ++ PD Y ++ L Q G + ++L + M
Sbjct: 92 YSTLIKGLCMEHRISEATWLF-MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM 150
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + +P L+ Y+ +++ + +FK+++ G+ P
Sbjct: 151 LNDTGR---------YGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVI 201
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+Y + SGK++ F +M G T VL+ F +EGK+ EA + M
Sbjct: 202 SYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVM 261
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
RG + Y L LC R +A + +K L +P I + L+ G
Sbjct: 262 VHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL-GCRPDAIAYGTLMKGLCQTGK 320
Query: 471 IDDCISIFQHMKD-------HC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
I+ + + Q M + C P++ T + ++ + + +A EL E +
Sbjct: 321 INIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQR---- 376
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
G L D TYS++++ H+ +++ M GC+ D + L+
Sbjct: 377 -------GCIL--DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGL 427
Query: 583 SRAG 586
+ G
Sbjct: 428 CQTG 431
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ + YT L+ L R EA ++F + ++ PD+ Y ++ L Q G +K +
Sbjct: 741 IPNTVTYTTLVKGLCMNDRISEATQLF-MKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 799
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L ++M + N +PD++ Y+ +++ + +FK+++ G
Sbjct: 800 ELHKKMLSDTGQYGTN---------FKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 850
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+ P+ +Y + +SGK + F +M G + A+TY V++ F +EG+I++A+
Sbjct: 851 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 119/629 (18%), Positives = 226/629 (35%), Gaps = 137/629 (21%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ +G+ +A +FN ML D + PD+ + + G + E +L+E M
Sbjct: 203 YTSLIHGFCHSGKWEKAKCLFNEML-DVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVM 261
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+HR D+V Y+ ++ H+ +F ++K G +P A
Sbjct: 262 ----------VHRGCI-----LDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAI 306
Query: 351 TYGLAMEVMLQSGKYDLV------------------------------------------ 368
YG M+ + Q+GK ++
Sbjct: 307 AYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEA 366
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
+E M + G + +TY L++ E +I+EA +M++ G A Y L
Sbjct: 367 NELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKG 426
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 488
LC G A+ + H + L D G C+P
Sbjct: 427 LCQTGNINIALQL--------HQEMLN-----------DTGRYG----------IKCKPT 457
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + + ++ ++ +A+ELFEE + G + PD +Y++++
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEE-----------MKAQG--IMPDVISYTTLIHGFC 504
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ +WE + ++ M G Q D T + L+ + GK + +++ G I +
Sbjct: 505 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVV 564
Query: 609 FFTEMLIQAIVQSNYEKAVAL---INAMAYAPFHITERQWTE-LFESNEDRISRDKLEKL 664
T ++ ++ KA L + + P +T + L +S +I+ + + +
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 624
Query: 665 LNAL------CNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDI----SP 714
L+ C NA S I + L + R ++ R+L D+ S
Sbjct: 625 LSDTSPYGINCKPNAISYSIIIDGLCKCG----REDEARELFKEMKALGVIPDVISYTSL 680
Query: 715 LHGIHEAFDVKETENVPSSSASMMF-ENADLGADPLPQKTDVAVDI----------DSIN 763
+HG + K+ A +F E D+G P V +D+ + +
Sbjct: 681 IHGFCRSGKWKD--------AKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELL 732
Query: 764 HSSLSRQADADTEMFSKALSYIHSNDRPS 792
+ R +T ++ + + NDR S
Sbjct: 733 EVMIQRGCIPNTVTYTTLVKGLCMNDRIS 761
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 25/251 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W+ A + + + + + D+ + ++ L+ +L K G+ EA + +M+
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTT---FSVLIDMLCKEGKVIEANELLEVMI 736
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y ++ L + E +L +M++ PD+V
Sbjct: 737 QR-GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL---------------PDVV 780
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRK------SGLKPSAATYGLAMEVMLQSGKYDLVH 369
Y ++ + K + K++ + KP +Y + ++ + + G+ D
Sbjct: 781 TYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAR 840
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E F++M G ++Y L+ F GK+ +A M +GV A Y +
Sbjct: 841 ELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 900
Query: 430 CNNGRWQDAML 440
C G+ A+
Sbjct: 901 CKEGQIDKALF 911
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 132/327 (40%), Gaps = 37/327 (11%)
Query: 310 LEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKS--------GLKPSAATYGLAMEVML 360
L PD +N ++N C +G+ + +R+ ++P T + ++++
Sbjct: 6 LFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILC 65
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ GK +E M + G + +TY L++ E +I+EA +M++ G A
Sbjct: 66 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 125
Query: 421 VYYELACCLCNNGRWQDAMLVVEKI--KSLRH---SKPLEITFTGLIISSMDGGHIDDCI 475
Y L LC G A+ + +++ + R+ KP I+++ +I D+
Sbjct: 126 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 185
Query: 476 SIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG------ 528
+F+ MK P++ + +++ + + + KAK LF E SG
Sbjct: 186 ELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMF 245
Query: 529 --DGAPLKPDE--------------YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
+G ++ +E TYS++++ H+ ++ M GC+ D
Sbjct: 246 CKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDA 305
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLL 599
+ L+ + GK ++ H +L
Sbjct: 306 IAYGTLMKGLCQTGKINIALHLHQEML 332
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 126/309 (40%), Gaps = 46/309 (14%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA---KSGEAIGALTYKV------- 389
+R +GL P + T+ + + + + V+E MA + G +TY +
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKR---VNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTS 57
Query: 390 --LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ +EGK+ EA + M QRG + Y L LC R +A + ++
Sbjct: 58 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 117
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYS 500
L +P IT+ L+ G+I+ + + Q M + C+P + + + ++
Sbjct: 118 L-GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 176
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
++ +A+ELF+E + G + PD +Y+S++ + +WE + ++
Sbjct: 177 KDRREDEARELFKE-----------MKAQG--MMPDVISYTSLIHGFCHSGKWEKAKCLF 223
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
M G Q D T L+ + GK ++EA E+ + ++ +
Sbjct: 224 NEMLDVGIQPDVTTSGVLIDMFCKEGK----------VIEANELLEVMVHRGCILDIVTY 273
Query: 621 SNYEKAVAL 629
S K + +
Sbjct: 274 STLIKGLCM 282
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 145/365 (39%), Gaps = 42/365 (11%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
++P + ++++ L G +KE V+L M ++ EP+++ YN
Sbjct: 154 IHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH---------------EPNVISYNT 198
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++N + VFK++ ++G KP TY ++ + + + EF +M G
Sbjct: 199 IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRG 258
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
TY +V F G++NEA + M R V+ L LC G +A
Sbjct: 259 IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEAR 318
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS----IFQHM-KDHCEPNIGTVNA 494
LV E + + +P T+ L MDG + ++ +F+ M + C P + + N
Sbjct: 319 LVFETMTE-KGVEPNISTYNAL----MDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNI 373
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + ++ +AK L E L PD TYS++++ + +
Sbjct: 374 LINGFCKSRRMDEAKSLLAEMYH-------------KALNPDTVTYSTLMQGLCQFGRPK 420
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAG----KCHLLEHAFDSLLEAGEIPHPLFF 610
++K M G + ++ LL + G LL+ + LE + H +
Sbjct: 421 EALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILI 480
Query: 611 TEMLI 615
M I
Sbjct: 481 EGMFI 485
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/351 (17%), Positives = 133/351 (37%), Gaps = 48/351 (13%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
N ++N + + ++ K G+ P+A+T+ + + GK E F +M +
Sbjct: 127 NVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
G ++Y ++ + G + AV + MEQ G Y + LC + D
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND 246
Query: 438 AMLVVEKI--------------------------------KSL--RHSKPLEITFTGLII 463
AM + ++ K + R P +T T L+
Sbjct: 247 AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD 306
Query: 464 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
G + + +F+ M + EPNI T NA++ Y + ++AK++FE R +
Sbjct: 307 GLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA- 365
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
P ++Y+ ++ + + + + + M D ++ L+
Sbjct: 366 ------------PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 413
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ G+ + F + G +P+ + ++ +L + ++A+ L+ +M
Sbjct: 414 CQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSM 464
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 112/272 (41%), Gaps = 17/272 (6%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F ++ + +PS A +G + + +Y V +M G + VL+
Sbjct: 76 FYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCR 135
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLE 455
++ AV+ + M + G+ TAS + L LCN G+ ++A+ L E ++ R +P
Sbjct: 136 LNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR--RGHEPNV 193
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
I++ +I G+ + +F+ M ++ C+P++ T N ++ ++ + + A E E
Sbjct: 194 ISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSE 253
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ G P P+ +TY+ M+ Q ++K M D
Sbjct: 254 -----------MLDRGIP--PNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVT 300
Query: 575 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
L+ + G F+++ E G P+
Sbjct: 301 LTILVDGLCKEGMVSEARLVFETMTEKGVEPN 332
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 101/269 (37%), Gaps = 15/269 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P + + L + Q+ V + Q+ G+ + + + + + + D
Sbjct: 86 PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K G A T+ L+ EGKI EAV M +RG Y + LC
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
G A+ V +K++ KP +T+ +I S ++D + M D PN+
Sbjct: 206 TGNTSMAVDVFKKMEQ-NGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVF 264
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T N M+ + ++A LF+E G + PD T + +++
Sbjct: 265 TYNCMVHGFCILGQLNEATRLFKEMV-------------GRDVMPDTVTLTILVDGLCKE 311
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
V++ M G + + + + L+
Sbjct: 312 GMVSEARLVFETMTEKGVEPNISTYNALM 340
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 16/203 (7%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L PD Y ++ L Q G KE + + + M L P+LV Y+
Sbjct: 399 LNPDTVTYSTLMQGLCQFGRPKEALNIFKEM---------------CSYGLLPNLVTYSI 443
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+L+ + K +++ L+P+ + + +E M +GK ++ E F K+ G
Sbjct: 444 LLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADG 503
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
TY V+++ +EG +EA R ME G + + Y + N A+
Sbjct: 504 IRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 563
Query: 440 LVVEKIKSLRHSKPLEITFTGLI 462
+++++ R S L TF L+
Sbjct: 564 RLIDEMVGKRFSANLS-TFQMLL 585
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 100/515 (19%), Positives = 204/515 (39%), Gaps = 42/515 (8%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+R LV LS ++ + M++SG + L +G W A+
Sbjct: 36 YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL 95
Query: 211 SVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN-LYPDIAAYH 268
+++ + D K + T +++ L +A EA+ + M CN P++ Y
Sbjct: 96 DMIE-------REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM--RCNSCIPNVVTYR 146
Query: 269 SVAVTL---GQVGLLKELVKLIERMRQKPSKRIKN------MHRKNWDPVLE-------- 311
++ Q+G K ++ ++ P+ + N + K++ +
Sbjct: 147 TLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTC 206
Query: 312 ---PDLVVYNAVLNA-C----VPSHQWKGVFW-VFKQLRKSGLKPSAATYGLAMEVMLQS 362
P VVYN + + C +PS + ++ ++ + + +
Sbjct: 207 GCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV 266
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
GK+D + ++M + G TY ++ K+ +A + M+ GV Y
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
L C G + A + E+++S+ S P +T+T LI + + + IF M
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCS-PTVVTYTALIHAYLKAKQVPQANDIFHRMV 385
Query: 483 D-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE---TTRANSSGYTFLSGDGAPLKPDEY 538
D C PN T A++ + SKA E++ + T+ + S + F D L P+
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 445
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
TY ++++ AH+ ++ + M SGC+ + + L+ +AGK + F +
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ G +P +T ++ + + A+ +++ M
Sbjct: 506 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 10/289 (3%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ KA + +A IF+ M+ D P+ Y ++ L + G + + ++ ++
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Query: 291 RQKPSKRIKNMHRKNWDP-VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + D L P++V Y A+++ +H+ + + SG +P+
Sbjct: 420 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ ++GK D E F +M K G TY L+ +++G+++ A+ +
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK---PLEITFTGLIISSM 466
M + Y + LC G + A+ K+ SL K P +T+T LI
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKAL----KLLSLMEEKGCSPNVVTYTALIDGLG 595
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G ID + +F M + C PN T ++ + KA+ L E
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 644
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 95/246 (38%), Gaps = 49/246 (19%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ VY L+ KAG+ A +F L + C P + Y S+ + + G L +K+
Sbjct: 478 NHIVYDALIDGFCKAGKIDSAQEVF-LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 536
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +M + P++V Y A+++ + + + + + G
Sbjct: 537 LSQMLKDSCT---------------PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 581
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA--- 403
P+ TY ++ + ++GK DL + F +M++ G + +TY+VL+ G +++A
Sbjct: 582 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641
Query: 404 ------------------------------VAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+ + ME G V A VY L C G
Sbjct: 642 LGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAG 701
Query: 434 RWQDAM 439
R + AM
Sbjct: 702 RLEIAM 707
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/420 (17%), Positives = 151/420 (35%), Gaps = 61/420 (14%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L G+ +A ++ M+ PD + Y V L +++ L + M+
Sbjct: 263 LCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG--- 318
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ PD+ Y ++++ + + W+F+++R G P+ TY +
Sbjct: 319 ------------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 366
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
L++ + ++ F +M +G +TY LV + G I++A +
Sbjct: 367 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 426
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH-IDDCIS 476
+ Y+ C + RH+ + G ++ + H +D
Sbjct: 427 DSDFYFP-----CED----------------RHTLAPNVVTYGALVDGLCKAHKVDHAHE 465
Query: 477 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTFLS------ 527
+ M CEPN +A++ + + A+E+F + T+ S +T+ S
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525
Query: 528 GDGA--------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
DG P+ TY++M++ + E + M GC +
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ L+ +AGK L F + G P+ + + ++ +KA L+ M
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 25/247 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
++ GL G +A+ +L +++K + YT L+ LGKAG+ +L +F M
Sbjct: 555 MIDGLCRIGESEKALKLLSL---MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C+ P+ Y + L GLL + L+ M+Q W L+
Sbjct: 612 RKGCS--PNYVTYRVLINHLCAAGLLDKARLLLGEMKQT-----------YWPKYLQG-- 656
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y + S + + +++ G P A YG+ ++ ++G+ ++ E ++
Sbjct: 657 --YRCAIQG--FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 712
Query: 375 MAKSGEAIGALT--YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
M + ++ Y L++A ++ EA M +RG V SV+ L L
Sbjct: 713 MMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEV 772
Query: 433 GRWQDAM 439
+W +A+
Sbjct: 773 KKWDEAL 779
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 27/239 (11%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V Q+ K P+ TY ++ + + G+ + + M + G + +TY L+
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ GKI+ ++ M ++G Y L LC G A L++ ++K K L+
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655
Query: 456 ------ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML-KVYSRNDMFSKA 508
F+ I+S+ I + M+ + I V ML +S+ A
Sbjct: 656 GYRCAIQGFSKSFIASL---------GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
EL +E SS +K D Y+S+++A A Q E +Y M G
Sbjct: 707 MELHKEMMEVPSS-----------VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRG 754
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 82/230 (35%), Gaps = 53/230 (23%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
L+ G +PS TY ++V+ +G+ DL ++M++SG + T A
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHA------ 84
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
LC GRW DA+ ++E+ K + T
Sbjct: 85 -----------------------------LCKEGRWADALDMIER----EDFKLDTVLCT 111
Query: 460 GLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
+I M+ + D+ +S M+ + C PN+ T +L + + K +
Sbjct: 112 HMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIIN----- 166
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+ +G P+ ++S++ + + Y + M GC
Sbjct: 167 ------MMMTEGC--NPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 28/311 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + G +AM+V Y +K S +Y L+ L K G +AL++ M+
Sbjct: 362 LINGLCNDGDMNRAMAVF---YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E C+ PDI Y+ V L ++G L + ++ K PD+
Sbjct: 419 EHGCS--PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI---------------PDI 461
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+N +++ + + G+ P TY + + ++ K D V + F+
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G +TY +L+ +F ++ K++EA+ + M+ RG+ L C LC+NG
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 435 WQDA---MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
A + +EK +S + F +I + + ++ +F M C P+
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAI---FNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNY 638
Query: 491 TVNAMLKVYSR 501
T M+ Y +
Sbjct: 639 TYRVMIDSYCK 649
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 140/353 (39%), Gaps = 33/353 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ KL+ +L K G E+ ++F+ +++ + P++ ++ L + G + E +L+E
Sbjct: 217 LTFNKLIHVLCKKGNVQESEKLFSKVMKR-GVCPNLFTFNIFIQGLCRKGAIDEAARLLE 275
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+ + L PD++ YN ++ + ++ SG++P+
Sbjct: 276 SIVSEG---------------LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + ++G + R G TY L+ +G +N A+A
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-D 467
++G + +Y L L G A+ +++ + + H +I L+++ +
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM--MEHGCSPDIWTYNLVVNGLCK 438
Query: 468 GGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G + D I + C P+I T N ++ Y + KA E+ + T L
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD----------TML 488
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
S + PD TY+++L A + + +K M GC + + L+
Sbjct: 489 SHG---ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/355 (17%), Positives = 137/355 (38%), Gaps = 31/355 (8%)
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y + G+ G ++E V + ERM +D EP + YNA++N
Sbjct: 77 GVYIGIMRDYGRKGKVQEAVNVFERM-------------DFYD--CEPSVQSYNAIMNIL 121
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
V + V+ +++ G+ P T+ + M+ +G+ M G A
Sbjct: 122 VEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNA 181
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
++Y ++ F++E EA M ++G+ + +L LC G Q++ + K
Sbjct: 182 VSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSK 241
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRND 503
+ R P TF I G ID+ + + + + P++ + N ++ + ++
Sbjct: 242 VMK-RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHS 300
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+A+ + + ++P+E+TY++++ A + + + +
Sbjct: 301 KLVEAECYLHKMVNSG-------------VEPNEFTYNTIINGFCKAGMMQNADKILRDA 347
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
G D+ ++ L+ G + F +E G H + L++ +
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG-FKHSIILYNTLVKGL 401
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 103/516 (19%), Positives = 204/516 (39%), Gaps = 61/516 (11%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDL-KSRFVYTKLLAILGKAGRPHEALRIFNL 253
KL+ L KG+ +++ + V KR + + F + + L + G EA R+
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVM----KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM--------- 301
++ + L PD+ +Y+++ + L E + +M +P++ N
Sbjct: 277 IVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG 335
Query: 302 HRKNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+N D +L PD Y++++N VF + + G K S Y
Sbjct: 336 MMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYN 395
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
++ + + G + + M + G + TY ++V + G +++A + + +
Sbjct: 396 TLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK 455
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHID 472
G + + L C A+ +++ + L H P IT+ L+ +D
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM--LSHGITPDVITYNTLLNGLCKARKLD 513
Query: 473 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET-TRANSSGY----TFL 526
+ + F+ M + C PNI T N +++ + ++ S+A ELF+E TR + T +
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 527 SGDGAPLKPD-------------EYTYSS-----MLEASATAHQWEYFEYVYKGMALSGC 568
G + + D +++YS+ M+ A E ++ M S C
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDC 633
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEMLIQAIVQSNYEK 625
D + ++ + G L H F LLE G +P ++L V +
Sbjct: 634 APDNYTYRVMIDSYCKTGNID-LAHTF--LLENISKGLVPSFTTCGKVLNCLCVTHRLSE 690
Query: 626 AVALINAMAYAPFHITERQWTELFESNEDRISRDKL 661
AV +IN M I + +FE+++ ++ K+
Sbjct: 691 AVVIINLMVQNG--IVPEEVNSIFEADKKEVAAPKI 724
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 160/416 (38%), Gaps = 63/416 (15%)
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVY 231
A + +M Q G T LL+GL G R+AM+V G+ VY
Sbjct: 126 AHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFA---GMWPDGCAPDSHVY 182
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
+ ++ L AGR EA+ + + P++A Y+++ G L+ + + + M+
Sbjct: 183 SIMVHGLCGAGRAGEAVALLTDAMGK-GFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQ 241
Query: 292 QK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
K P+ R ++ + + L P++V Y ++ +
Sbjct: 242 SKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLE 301
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
F + + GL P+ T + ++ + + G+ + +F + + G + + Y ++
Sbjct: 302 HAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMI 361
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA------------- 438
A + GK + A ++ + G V A +Y L LC + +A
Sbjct: 362 DALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQ 421
Query: 439 -------MLVVEKIKSLRHS--------------KPLEITFTGLIISSMDGGHIDDCISI 477
+L+ + ++ R KP +T+T I S G ++D S+
Sbjct: 422 ANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESM 481
Query: 478 FQHMKDH-CEPNIGTVNAMLKVYSR----NDMFSKAKELFEETTRANSSGYTFLSG 528
M DH PN+ T N ++K Y+ + FS K + + + N YT L G
Sbjct: 482 MIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLG 537
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 171/429 (39%), Gaps = 46/429 (10%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
++ F Y LL L AG EA+ +F M D PD Y + L G E V
Sbjct: 142 RTPFTYAALLQGLCGAGMVREAMAVFAGMWPD-GCAPDSHVYSIMVHGLCGAGRAGEAVA 200
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L+ K P++ VYNA+++ + + +FK ++ G
Sbjct: 201 LLTDAMGKG---------------FVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGC 245
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P+ TY + +SGK + + +M ++G A +TY L++ EG + A
Sbjct: 246 LPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFR 305
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ +ME G+ L LC +GR ++A + + + K ++ +T +I +
Sbjct: 306 LLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQ-KGIKVNQVIYTSMIDAL 364
Query: 466 MDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRANS 520
G D ++ Q + + P+ ++++ R + +A ++ E +AN+
Sbjct: 365 CKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANA 424
Query: 521 SGYTFLSGD------------------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+T L A +KPD TY+ + + + E E +
Sbjct: 425 VPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQ 484
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLFFTEMLIQAIV 619
M G + + T + L+ + G L+ AF SL ++ G P+ +T +L +
Sbjct: 485 MIDHGVRPNLTTYNTLIKGYANLG---LVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLK 541
Query: 620 QSNYEKAVA 628
+++Y VA
Sbjct: 542 KNSYHDLVA 550
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/430 (17%), Positives = 166/430 (38%), Gaps = 50/430 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH------------------R 303
P I +++ + L + G+L ++ L RM ++N+H +
Sbjct: 41 PPIRCLNTLLMALARHGMLSDMESLAARMP------VRNLHTYTTLINAYCHAGDLPAAK 94
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVM 359
++ +L L + + V + G+F +F + + G + TY ++ +
Sbjct: 95 RHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGL 154
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+G F M G A + Y ++V G+ EAVA + + +G V
Sbjct: 155 CGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNV 214
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
+VY L C+ G + A+ + + ++S + P T+T LI G ++ + ++
Sbjct: 215 AVYNALIDGYCSTGDLELAIDIFKGMQS-KGCLPNVRTYTQLICGFCKSGKVERAMVLYS 273
Query: 480 HMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M + PN+ T +++ A L S + L P+E+
Sbjct: 274 RMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLH-------------SMEACGLAPNEW 320
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
T +++A + E + + G +++Q + ++ ++GK + +
Sbjct: 321 TCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKI 380
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA-------YAPFHITERQWTELFES 651
+ G +P ++ ++ ++ +A++L+N M PF I + F S
Sbjct: 381 ITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRS 440
Query: 652 NEDRISRDKL 661
+ ++ D++
Sbjct: 441 DSPKMISDRM 450
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 160/393 (40%), Gaps = 68/393 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L++ + GS + A+ V W +K++ + +R +Y ++ + + + +A +F
Sbjct: 123 LIREIAISGSLKHAVHVFRW---MKNQENYCARNDIYGMMIRLHARHNKVDQARGLF-FE 178
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ P+ Y+S+ + G + +++ M++ + P
Sbjct: 179 MQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQR---------------AAIPPSR 223
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN V+NAC + WK + K++ ++G+ P T+ + + +Y +F
Sbjct: 224 TTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEI 283
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M S A T +++ + G EA+ +M +R
Sbjct: 284 MKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRER--------------------- 322
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
++ H P +T+T ++ S G ++C ++F M + PNI + N
Sbjct: 323 -----------RTTCH--PDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYN 369
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
A+L Y+ + M ++A E F+ L +G L+PD +Y+S+L A + Q
Sbjct: 370 ALLGAYASHGMHTEALETFK-----------LLKQNG--LRPDIVSYTSLLNAYGRSAQP 416
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
E V+ M + C+ ++ + L+ AG
Sbjct: 417 EKAREVFNEMRKNACKPNKVSYNALIDAYGSAG 449
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/549 (20%), Positives = 205/549 (37%), Gaps = 95/549 (17%)
Query: 172 AKNWK----FVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD 224
A NWK + M ++G+ + T +L K + + +A++ + + K D
Sbjct: 236 AGNWKKALELCKKMTENGVGPDLITHNIVLSAFK---NGAQYSKAIAYFEIMKSSKVAPD 292
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKEL 283
+ + L +G G EA+ +FN M E +PD+ Y S+ + G +
Sbjct: 293 TCTMNIVIHCLVKIGLYG---EAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENC 349
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ + M + + P++V YNA+L A FK L+++
Sbjct: 350 KAVFDIMVAEG---------------VRPNIVSYNALLGAYASHGMHTEALETFKLLKQN 394
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
GL+P +Y + +S + + E F +M K+ ++Y L+ A+ G + EA
Sbjct: 395 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEA 454
Query: 404 VAAVRNMEQRG----VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---------- 449
++ + MEQ G V+ +++ AC C D +L K + ++
Sbjct: 455 ISLLHEMEQDGIQPDVISISTLL--TACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGI 512
Query: 450 ----------------------HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP 487
+ KP +T+ LI S G + + F+ M D
Sbjct: 513 GSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLD---- 568
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
L ++ +++S + + + + TF S PD TY+++++A
Sbjct: 569 --------LNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAY 620
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ W ++K M +G Q D A C L A + + G+
Sbjct: 621 SDDGSWRRAWDLFKEMENNGTQPD-------------AIVCSSLMEALN---KGGQPERV 664
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNA 667
L E + Q +Q N + +I++ T Q E +S+ IS L +LN
Sbjct: 665 LQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLDSSLSSISFGTLNHILNF 724
Query: 668 LCNCNAASS 676
L C S
Sbjct: 725 LGKCGRTES 733
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 16/221 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT L+ G A +F M E+ PD S+ L + G + +++LIE
Sbjct: 611 LTYTTLIKAYSDDGSWRRAWDLFKEM-ENNGTQPDAIVCSSLMEALNKGGQPERVLQLIE 669
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+QK ++ + Y ++++C WK + + L S S
Sbjct: 670 FMKQKK---------------IQLNQKAYFEIISSCTMLRDWKTASQIIEHLDSSLSSIS 714
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
T + + + G+ + + + F KM S +G TY +L+R GK + V ++
Sbjct: 715 FGTLNHILNFLGKCGRTESMMKLFYKMVTSCSTVGLSTYTILLRNLLIVGKWRKYVEVLQ 774
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
ME GV T +Y + + + L+ EKI +LR
Sbjct: 775 WMEDAGVCPTLYMYQSVLPYIWRDNSMDYVTLMQEKINALR 815
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 146/360 (40%), Gaps = 17/360 (4%)
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ GL PS+ T +E+ ++ G + F +M+ G + +YK++V + +GK
Sbjct: 774 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 833
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
I EA + M QRG + + + LC NG A+ K+ L KP I FT
Sbjct: 834 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGF-KPNLINFT 892
Query: 460 GLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI G I + + M ++ +PN+ T A++ + KA LF + R+
Sbjct: 893 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 952
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
++ KP+ +TY+SM+ + E ++ M G + + L
Sbjct: 953 DT------------YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 1000
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
+ +AG + + + G +P+ + + +S +A L+N
Sbjct: 1001 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 1060
Query: 639 HITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 698
+T L +++ ++ + + L C N E + + + A CR +K ++
Sbjct: 1061 EADGVTYTILI---QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 1117
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 178/471 (37%), Gaps = 75/471 (15%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT--KLLAILGKAGRPH 245
T Q + ++ L + A+ W G + R ++ T LLA G + H
Sbjct: 690 LTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLAN-GNLQKAH 748
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
E +R ML + ++G L E V ++ M+ +
Sbjct: 749 EVMRC---MLRN----------------FSEIGRLNEAVGMVMDMQNQG----------- 778
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
L P + N VL V + VF ++ G+ P +++Y L + + GK
Sbjct: 779 ----LTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 834
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+ M + G T +++ A E G +N A+ R M G + L
Sbjct: 835 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 894
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHM--K 482
LC G + A ++E++ +R+ KP T T LI G + +F +
Sbjct: 895 IDGLCKKGSIKQAFEMLEEM--VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 952
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
D +PN+ T +M+ Y + D ++A+ LF +R G L P+ TY++
Sbjct: 953 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLF---SRMKEQG----------LFPNVNTYTT 999
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQ-------TKHAWL--LVEASRAGKCH-LLE 592
++ A F Y+ M L G D+ T +A + L + SRA + + LL
Sbjct: 1000 LINGHCKAGS---FGRAYELMNLMG---DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 643
AF LEA + + + E Q++ +A+A M F R
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQ----CKQNDINQALAFFCRMNKTGFEADMR 1100
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 141/367 (38%), Gaps = 28/367 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++ L E + + + R M G L+ GL KGS +QA +L+ +
Sbjct: 858 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 917
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K ++ + +T L+ L K G +A R+F ++ P++ Y S+ +
Sbjct: 918 GWKPNV---YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 974
Query: 280 LKELVKLIERMRQK---PS----KRIKNMHRKNW-------------DPVLEPDLVVYNA 319
L L RM+++ P+ + N H K D P++ YNA
Sbjct: 975 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 1034
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
+++ + + + + GL+ TY + ++ + + FF +M K+G
Sbjct: 1035 AIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 1094
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+L+ AF + K+ E+ + + G++ T Y + C C G A+
Sbjct: 1095 FEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLAL 1154
Query: 440 LVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAML 496
+K RH P T+ LI +D+ +++ M D P + V
Sbjct: 1155 KYFHNMK--RHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAY 1212
Query: 497 KVYSRND 503
+ RND
Sbjct: 1213 EYCKRND 1219
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 107/283 (37%), Gaps = 25/283 (8%)
Query: 163 DRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDK 222
D+L+ EM F R M + GL L+ G GS+ +A +++ + D+
Sbjct: 973 DKLNRAEML-----FSR-MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNL---MGDE 1023
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
+ + + Y + L K R EA + N C L D Y + + + +
Sbjct: 1024 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS-CGLEADGVTYTILIQEQCKQNDINQ 1082
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ RM + E D+ + N ++ A + K +F+ +
Sbjct: 1083 ALAFFCRMNKTG---------------FEADMRLNNILIAAFCRQKKMKESERLFQLVVS 1127
Query: 343 SGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINE 402
GL P+ TY + + G DL ++F M + G + TY L+ ++ ++E
Sbjct: 1128 LGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDE 1187
Query: 403 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
A M RG+ LA C +AM+++E +
Sbjct: 1188 ACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 1230
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 167/441 (37%), Gaps = 72/441 (16%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+LL + + +S+ + L DL S +T L+ + R AL M
Sbjct: 84 RLLIAIAKLNKYEAVISLFRHLEMLGISHDLYS---FTTLIDCFCRCARLSLALSCLGKM 140
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
++ P I + S+ V E + L++++ EP++
Sbjct: 141 MK-LGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY---------------EPNV 184
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V+YN ++++ Q V K ++K G++P TY + + SG + +
Sbjct: 185 VIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSD 244
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G + +T+ L+ + +EG++ EA M QR V Y L LC +G
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
+A V+ + S + P +T+ LI +DD + I M +D + + T N
Sbjct: 305 LDEAKKVLNVLVS-KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYN 363
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA------- 546
+ + Y + FS A+++ R S G + PD YT++ +L+
Sbjct: 364 TLYQGYCQAGKFSAAEKVLG---RMVSCG----------VHPDMYTFNILLDGLCDHGKI 410
Query: 547 ------------SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
S T + + KG+ C+ D+ + AW L
Sbjct: 411 GKALVRLEDLQKSKTVVGIITYNIIIKGL----CKADKVEDAWYL--------------- 451
Query: 595 FDSLLEAGEIPHPLFFTEMLI 615
F SL G P + + M+I
Sbjct: 452 FCSLALKGVSPDVITYITMMI 472
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 101/237 (42%), Gaps = 15/237 (6%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y L + + S ++ +F + +S PS + + + + KY+ V FR +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G + ++ L+ F +++ A++ + M + G + + L C+ R+
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 495
+AM +V++I L + +P + + +I S + G ++ + + +HMK P++ T N++
Sbjct: 167 EAMSLVDQIVGLGY-EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
+ + + + + + R S PD T+S++++ Q
Sbjct: 226 ITRLFHSGTWGVSARILSDMMRMGIS-------------PDVITFSALIDVYGKEGQ 269
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/302 (18%), Positives = 119/302 (39%), Gaps = 32/302 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++D L E+ ++ M + G+ L+ L G+W + +L + +
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ ++ L+ + GK G+ EA + +N M++ ++ P+I Y+S+ L GLL
Sbjct: 250 ISPDV---ITFSALIDVYGKEGQLLEAKKQYNEMIQR-SVNPNIVTYNSLINGLCIHGLL 305
Query: 281 KELVKLIERMRQK-----------------PSKRIKN-------MHRKNWDPVLEPDLVV 316
E K++ + K +KR+ + M R D D
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG----DTFT 361
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN + + ++ V ++ G+ P T+ + ++ + GK +
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
KS +G +TY ++++ + K+ +A ++ +GV Y + L W+
Sbjct: 422 KSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWR 481
Query: 437 DA 438
+A
Sbjct: 482 EA 483
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 168/428 (39%), Gaps = 47/428 (10%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
RS ++++ L + K +F+ M G+ ++ G +G +++A
Sbjct: 213 RSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARV 272
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+ +KDK + Y ++ L K GR EA + MLE L P+ Y+++
Sbjct: 273 IFQT---MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG-GLVPNAVTYNALI 328
Query: 272 ---VTLGQV-------------GLLKELVK--------LIERMRQKPSKRIKNMHRKNWD 307
G + G++ LV +E IK M K
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG-- 386
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
+ PD V +N ++N K F + ++ G++P+ TY + V+ + +
Sbjct: 387 --MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKE 444
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
F K+ + G + + L+ G I+ A ++ M+ V+ Y L
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCE 486
C G+ ++A +++++K R KP I++ LI G + D + + M +
Sbjct: 505 GYCREGKVEEARQLLDEMKR-RGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFD 563
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
P I T NA+++ +N A+EL +E S G T PD+ TY S++EA
Sbjct: 564 PTILTYNALIQGLCKNQEGEHAEELLKEMV---SKGIT----------PDDSTYLSIIEA 610
Query: 547 SATAHQWE 554
T E
Sbjct: 611 METVDDLE 618
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 88/469 (18%), Positives = 188/469 (40%), Gaps = 76/469 (16%)
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH-- 268
++ D + +D+ D K+ ++ L+ + +P+EAL F L+ E P+I +
Sbjct: 129 TIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEK-GFVPNIETCNQM 187
Query: 269 -SVAVTLGQVGLLKELVKLIERMRQKPS-----------------KRIKNMHRKNWDPVL 310
S+ + L + + L + RM + S K+ K +
Sbjct: 188 LSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGV 247
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P++V YN +++ +++ +F+ ++ GL+P TY + + + G+ +
Sbjct: 248 KPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASG 307
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
KM + G A+TY L+ + +G +++A A M +G++ + Y L
Sbjct: 308 LICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALF 367
Query: 431 NNGRWQDAMLVVEKIK-------SLRHS---------------------------KPLEI 456
GR DA ++++++ ++ H+ +P +
Sbjct: 368 MEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLV 427
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
T+T LI + + ++F + ++ P+I NA++ + N +A +L +E
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
D + PDE TY+++++ + E + M G + D +
Sbjct: 488 -------------DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISY 534
Query: 576 AWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQS 621
L+ S+ G ++ AF D ++ G P L + LIQ + ++
Sbjct: 535 NTLISGYSKRGD---MKDAFRVRDEMMTTGFDPTILTYNA-LIQGLCKN 579
>gi|222616460|gb|EEE52592.1| hypothetical protein OsJ_34898 [Oryza sativa Japonica Group]
Length = 675
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 26/243 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP----DIAAYHSVAVTLGQVGLLKELVK 285
VYT L+ AGR + + + M + P D Y +V TL G ++
Sbjct: 331 VYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARA 390
Query: 286 LIERMRQK---PSKRIKNMHRKNW------------------DPVLEPDLVVYNAVLNAC 324
++E M Q S+ N+ K + + ++PD+V YN +++ C
Sbjct: 391 VLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGC 450
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE-AIG 383
V + G +F ++R+ G+ PSA +Y M+ SG+ L H+ F +M K A+
Sbjct: 451 VLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVD 510
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+ +LV A+ G + A V M+ RGV + Y LA + R +A+L+ E
Sbjct: 511 RAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWE 570
Query: 444 KIK 446
+IK
Sbjct: 571 EIK 573
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 109/255 (42%), Gaps = 34/255 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG-----LKPSAATYGLAMEVMLQSGKYD 366
P+ VY ++ + + + + V + + +R+ G +P TY + ++ +G +
Sbjct: 327 PNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDME 386
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEE---GKINEAVAAVRNMEQRGVVGTASVYY 423
+M ++G A +TY VL++ + ++ GK E +A +M + G+ Y
Sbjct: 387 RARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAV--DMAEAGIQPDVVTYN 444
Query: 424 EL--ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
L C L ++ A+ + +++ R P +++T L+ + G +F M
Sbjct: 445 TLIDGCVLTDDS--AGAVALFNEMRE-RGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEM 501
Query: 482 KDHCEPNIGTV----NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 537
+ +P + N +++ Y R + AK++ E R + G ++PD
Sbjct: 502 EK--DPRVAVDRAAWNMLVEAYCRLGLLESAKKVVE---RMKARG----------VQPDV 546
Query: 538 YTYSSMLEASATAHQ 552
TY S+ + A A +
Sbjct: 547 ATYGSLAKGIAVARR 561
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 126/316 (39%), Gaps = 44/316 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD +NA L+AC + +F Q+ P A TY + +++ ++G+ DLV
Sbjct: 201 PDTAAFNAALSACANAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVARV 260
Query: 372 FRKMAKSGEAI---GALTYK-----VLVRAFWEEGKINEAVAA------VRNMEQ----- 412
++ SG A+ + +L RA ++ I+ + V+ EQ
Sbjct: 261 LHRILSSGSHPLRHHAMRERRTDICLLFRAVADDHIISHDQQSCVLEDIVKPWEQEEVPL 320
Query: 413 --RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH-------SKPLEITFTGLII 463
+ + VY L N GR +D VV ++++R S+P +T+T +I
Sbjct: 321 LPKAYPPNSRVYTTLMKGYMNAGRVED---VVAMLRAMRREGETSPASRPDHVTYTTVIS 377
Query: 464 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ + G ++ ++ + M + + T N ++K Y + KAKEL
Sbjct: 378 TLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLA--------- 428
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+ A ++PD TY+++++ ++ M G + L+
Sbjct: 429 ---VDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAF 485
Query: 583 SRAGKCHLLEHAFDSL 598
+ +G+ L FD +
Sbjct: 486 AASGQPKLAHKVFDEM 501
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 96/238 (40%), Gaps = 12/238 (5%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+ Y ++ G ++++V ++ MR++ P PD V Y V+
Sbjct: 327 PNSRVYTTLMKGYMNAGRVEDVVAMLRAMRRE----------GETSPASRPDHVTYTTVI 376
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR-KMAKSGE 380
+ V + + V +++ ++G+ S TY + ++ Q + E MA++G
Sbjct: 377 STLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGI 436
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 440
+TY L+ AVA M +RG+ +A Y L +G+ + A
Sbjct: 437 QPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHK 496
Query: 441 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 497
V ++++ + L+ + G ++ + + MK +P++ T ++ K
Sbjct: 497 VFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVATYGSLAK 554
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++++ S YT L+ +G+P A ++F+ M +D + D AA++ + ++G
Sbjct: 466 MRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLG 525
Query: 279 LLKELVKLIERMRQKP-----------SKRIKNMHRKN-----WDPVLEP--DLVVYNAV 320
LL+ K++ERM+ + +K I R W+ + E D V A+
Sbjct: 526 LLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDGEVVEAL 585
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ CV + ++ + ++ + G++P+ A Y
Sbjct: 586 ADVCVRAALFRKALEMVARMEEMGVEPNKAKY 617
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 140/325 (43%), Gaps = 30/325 (9%)
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
++ +S+ + G++G+++EL+ + +M++ +EP L YN ++N
Sbjct: 187 VSPGNSLIKSFGKLGMVEELLWVWRKMKENG---------------IEPTLYTYNFLMNG 231
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
V + VF+ + +KP TY ++ ++G+ E R M G
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEAD 291
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+TY +++A + + + VA + M+++G+ + + LC G+ + V E
Sbjct: 292 KITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFE 351
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 502
+ + SKP +T LI G ++D I + M D P++ T + ++ +N
Sbjct: 352 NMIR-KGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKN 410
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+A + F+ T R N L + YSS+++ A + + E +++
Sbjct: 411 GRVEEAMDYFQ-TCRFNG------------LAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 563 MALSGCQLDQTKHAWLLVEASRAGK 587
M+ GC D + L+ ++ GK
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHGK 482
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 143/345 (41%), Gaps = 46/345 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY-GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+K G G + + WV+ +K+ + + Y L+ L A A R+F +M
Sbjct: 193 LIKSFGKLGMVEELL----WVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM 248
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E + PD+ Y+++ + G QK ++++ M K LE D
Sbjct: 249 -ESGRIKPDVVTYNTMIKGYCKAG-----------QTQKALEKLRVMETKG----LEADK 292
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+ Y ++ AC + +++++ + GL+ + L + + + GK + + F
Sbjct: 293 ITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFEN 352
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G Y VL+ + + G + +A+ + M G Y + LC NGR
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGR 412
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSM------DG----GHIDDCISIFQHMKDH 484
++AM + + F GL I+SM DG G +D+ +F+ M +
Sbjct: 413 VEEAMDYFQTCR-----------FNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEK 461
Query: 485 -CEPNIGTVNAMLKVYSRNDMFSKAKELF---EETTRANSSGYTF 525
C + NA++ ++++ +A LF EE + + YT+
Sbjct: 462 GCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTY 506
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 268 HSVAVTLGQV---GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
H+ ++ +G + G L E + E M +K SK P++ +Y +++
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYAVFENMIRKGSK---------------PNVAIYTVLIDGY 372
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + + ++ G P TY + + + ++G+ + ++F+ +G AI +
Sbjct: 373 AKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINS 432
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+ Y L+ + G+++EA M ++G + Y L +G+ +A+ + ++
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKR 492
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGH 470
++ T+T ++IS M H
Sbjct: 493 MEEEEGCDQTVYTYT-ILISGMFKEH 517
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 115/269 (42%), Gaps = 20/269 (7%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M++ GL ++ GL +G + +V + + K ++ +YT L+ K
Sbjct: 318 MDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVA---IYTVLIDGYAK 374
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G +A+R+ + M+++ PD+ Y V L + G ++E + + R
Sbjct: 375 TGSVEDAIRLLHRMIDE-GFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNG------ 427
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
L + + Y+++++ + + +F+++ + G + Y ++
Sbjct: 428 ---------LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 361 QSGKYDLVHEFFRKMAKS-GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ GK D F++M + G TY +L+ ++E + EA+ M +G+ TA
Sbjct: 479 KHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTA 538
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ L+ LC +G+ A +++++ +
Sbjct: 539 ACLRALSTGLCLSGKVARACKILDELAPM 567
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 175/440 (39%), Gaps = 34/440 (7%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
G+ + + + YT L+ L R EA R+F L ++ P+ Y ++ L Q
Sbjct: 151 GILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF-LRMQKLGCTPNAVTYGTLIKGLCQT 209
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + +KL + M S+ N +P ++ Y+ +++ + +F
Sbjct: 210 GNVNIALKLHKEMLNDASQYGVN---------CKPGVITYSIIIDGLCKVGREDEAKELF 260
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
++++ G+ P +Y + +GK+D F +M G +T+ VL+ +E
Sbjct: 261 EEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKE 320
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
GK+ EA + M QRG+V Y L C G A + + S + +P EI+
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPS-KGLEPDEIS 379
Query: 458 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF---- 512
+T LI + + ++++ M + PN+ T +LK + AK+LF
Sbjct: 380 YTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMK 439
Query: 513 EETTRANSSGY-TFLSG-----------------DGAPLKPDEYTYSSMLEASATAHQWE 554
ANS Y FL G K + YS +++ A + E
Sbjct: 440 TYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLE 499
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+++ ++ G Q D + ++ + G+ F+ + E G P + + +L
Sbjct: 500 TAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLL 559
Query: 615 IQAIVQSNYEKAVALINAMA 634
+ E+ + L++ M
Sbjct: 560 CGFCEGNKLEEVIKLLHKMV 579
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/323 (18%), Positives = 135/323 (41%), Gaps = 21/323 (6%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F F + +S P +++ + + + Y + + +M +G + T +L
Sbjct: 76 FHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANC 135
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+++EA+AA+ + +RG + Y L LC R +A + +++ L + P
Sbjct: 136 LCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT-P 194
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMFS 506
+T+ LI G+++ + + + M + +C+P + T + ++ +
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+AKELFEE + G + PD +YS+++ A +W+ ++++ M
Sbjct: 255 EAKELFEE-----------MKAQG--MIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ 301
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
G Q D + L+ + GK + + +++ G +P+ + + ++ + + A
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSA 361
Query: 627 VALINAMAYAPFHITERQWTELF 649
L +M E +T L
Sbjct: 362 RELFLSMPSKGLEPDEISYTTLI 384
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/376 (19%), Positives = 147/376 (39%), Gaps = 37/376 (9%)
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+A F+LM+ + P I++++ + L ++ +L L MR
Sbjct: 74 QAFHFFDLMMRS-HPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAG----------- 121
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
L PDL + + N ++ + + G P+ TY ++ + +
Sbjct: 122 ----LSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 177
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM----EQRGVVGTASV 421
F +M K G A+TY L++ + G +N A+ + M Q GV V
Sbjct: 178 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGV 237
Query: 422 --YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y + LC GR +A + E++K+ + P I+++ LI G D +F
Sbjct: 238 ITYSIIIDGLCKVGREDEAKELFEEMKA-QGMIPDVISYSTLIHGFCCAGKWDQSKHLFD 296
Query: 480 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 538
M D +P++ T + ++ + ++AK+L E + + P+
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRG-------------IVPNLI 343
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
TY+S+++ ++ M G + D+ + L+ + K + ++ +
Sbjct: 344 TYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM 403
Query: 599 LEAGEIPHPLFFTEML 614
L+ G+ P+ + +L
Sbjct: 404 LQVGKSPNVTTYGTLL 419
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 115/289 (39%), Gaps = 25/289 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+D L + + K + +M Q G+ + T ++ +GD S R+
Sbjct: 312 VLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARE------LF 365
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ K YT L+ K + EA+ ++N ML+ P++ Y ++ L Q
Sbjct: 366 LSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQ-VGKSPNVTTYGTLLKGLFQ 424
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G + + KL M+ + + +Y L+ + +
Sbjct: 425 KGKVGDAKKLFGVMKTYG---------------VSANSQIYGIFLDGLCKNDCLFEAMEL 469
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
F +L+ K + Y ++ + ++GK + E F K+++ G +TY +++ F +
Sbjct: 470 FNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCK 529
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
G+++ A ME+ G Y L C C + ++ + ++ K+
Sbjct: 530 VGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 166/399 (41%), Gaps = 44/399 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K + + + YT ++ +G+ G+ EA+ +FN M+ + L ++ Y+++ L +
Sbjct: 261 MKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITE-GLTLNVVGYNTLMQVLAKGK 319
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW---KGVFW 335
++ + +++ RM + + P+ Y+ VLN V Q G+
Sbjct: 320 MVDKAIQVFSRMVETGCR---------------PNEYTYSLVLNLLVAEGQLVRLDGIVE 364
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+ K+ G+ Y + + + G H F M +Y ++ +
Sbjct: 365 ISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLC 418
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
GK EA+ + + ++GVV +Y + L G+ + + + + ++ P
Sbjct: 419 GAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSAL---GKLKQISHIHDLFEKMKKDGPSP 475
Query: 456 ITFTGLIISSMDG--GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
FT I+ S G G +D+ I+IF+ + + C+P+I + N+++ +N +A F
Sbjct: 476 DIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRF 535
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
+E L PD TYS+++E + E +++ M + GCQ +
Sbjct: 536 KEMQEKG-------------LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ LL ++G+ + + + G P + +T
Sbjct: 583 VTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDSITYT 621
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+ +L+ L G +A+ +L ++ +K + +Y + + LGK + +F
Sbjct: 411 MSMLESLCGAGKTIEAIEMLSKIH---EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M +D PDI Y+ + + G+VG + E + + E + + K PD
Sbjct: 468 MKKD-GPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCK---------------PD 511
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
++ YN+++N + FK++++ GL P TY ME ++ + ++ + F
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFE 571
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+M G +TY +L+ + G+ EAV M+Q+G+ + Y L
Sbjct: 572 EMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDSITYTVL 623
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 18/190 (9%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYP 262
G +Q + D +K F Y L++ G+ G EA+ IF L DC P
Sbjct: 453 GKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCK--P 510
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
DI +Y+S+ LG+ G + E R K M K L PD+V Y+ ++
Sbjct: 511 DIISYNSLINCLGKNGDVDE-----------AHVRFKEMQEKG----LNPDVVTYSTLME 555
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+ + + + +F+++ G +P+ TY + ++ + +SG+ + + KM + G
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTP 615
Query: 383 GALTYKVLVR 392
++TY VL R
Sbjct: 616 DSITYTVLER 625
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 134/328 (40%), Gaps = 22/328 (6%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
F E ++KLL G + +++ L+ L +K + TKL+ +A
Sbjct: 66 FRETHLMKLLNRSCKAGKFNESLYFLEC---LVNKGYTPDVILCTKLIKGFFNFKNIEKA 122
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
R+ ++ + + PD+ AY++V +V ++ +++ RM+ +
Sbjct: 123 SRVMEIL--ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARG------------- 167
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
PD+V YN ++ + + V QL P+ TY + +E + G +
Sbjct: 168 --FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINE 225
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
+ +M G TY ++R +EG +E V M RG Y L
Sbjct: 226 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILIS 285
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 486
LC GR +A+ V+ K+ + P ++ LI + G +D I I +M + C
Sbjct: 286 SLCRFGRIDEAISVL-KVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 344
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEE 514
P+I N +L +N ++A E+F +
Sbjct: 345 PDIVNYNTILAALCKNGNANQALEIFNK 372
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 91/230 (39%), Gaps = 16/230 (6%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K + L Y ++ L + AL++ + +L D N P + Y + G
Sbjct: 163 MKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLD-NCMPTVITYTILIEATIVEG 221
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E +KL+E M + L PD+ YNA++ W +
Sbjct: 222 GINEAMKLLEEMLARG---------------LLPDMYTYNAIIRGMCKEGMWDEGEKLVA 266
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
++ G +P+ TY + + + + G+ D + M + +Y L+ A +EG
Sbjct: 267 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 326
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+++ A+ + M G + Y + LC NG A+ + K++ +
Sbjct: 327 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGM 376
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 90/228 (39%), Gaps = 16/228 (7%)
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
++GK++ F + G + L++ F+ I +A + +E
Sbjct: 80 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH-TEPDVF 138
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-Q 479
Y + C R + A V+ ++K+ R P +T+ +I S + + + + Q
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKA-RGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197
Query: 480 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
+ D+C P + T +++ ++A +L EE L PD YT
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG-------------LLPDMYT 244
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
Y++++ W+ E + M GC+ ++ ++ L+ R G+
Sbjct: 245 YNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGR 292
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 146/363 (40%), Gaps = 49/363 (13%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K+G + MLE L+P+ Y+++ L + G+L E ++RM Q +
Sbjct: 41 KSGSFQRGCSQLDRMLE-AGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCA---- 95
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
P++V YN +++ + + +++ + G P+ Y ++
Sbjct: 96 ------------PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSF 143
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
++G + F +M G + + VL+ W KI+EA R+M RG
Sbjct: 144 CKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDV 203
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y + LC + +A+ ++E++K P +T+T LI + +F+
Sbjct: 204 VTYNTMIAGLCKWKKLDEAVFLLERMKQ-EDVSPTFVTYTTLIDHLCKFARLQQAYEVFE 262
Query: 480 HMKDH---CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
M + C +V ++ + +AKE+F+E + G G + P
Sbjct: 263 KMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQE-----------MRGRG--ISPT 309
Query: 537 EYTYSSMLEASAT------AHQWEYF---------EYVYKGMALSGCQLDQTKHAWLLVE 581
TY+++LE + A + YF + Y+ + S C+ DQ + A+ L+
Sbjct: 310 VVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLS 369
Query: 582 ASR 584
A R
Sbjct: 370 AMR 372
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 160/386 (41%), Gaps = 38/386 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D + K F+R M + G T +++ G+ +AM V +
Sbjct: 103 IIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAK 162
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVG 278
+ D+ + + LL+ L +A + HEA +F M C PD+ Y+++ L +
Sbjct: 163 GCEPDIVN---FNVLLSGLWRARKIHEARELFRSMNSRGCK--PDVVTYNTMIAGLCKWK 217
Query: 279 LLKELVKLIERMRQK---PS--------------KRIKNMHR------KNWDPVLEPD-- 313
L E V L+ERM+Q+ P+ R++ + + P EP
Sbjct: 218 KLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYS 277
Query: 314 -LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
L++ N + A P + +F+++R G+ P+ TY +E +L + K E
Sbjct: 278 VLILINGLCKARRPGEAKE----MFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELT 333
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
M A TY++L+ + + ++ EA + M +G V + ++ L L
Sbjct: 334 YFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARA 393
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
GR DA + +++ + + + L + L+ + G +D+ + M D P+ T
Sbjct: 394 GRLDDAFELYKEMSRI-NCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFT 452
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTR 517
+ ++ +A++L EE R
Sbjct: 453 YDKLVVGLCWQGKADQARKLVEELVR 478
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 114/330 (34%), Gaps = 58/330 (17%)
Query: 366 DLVHE---FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
DLV + +M +G + ++ +L+R F++ G + + M + G+ A +Y
Sbjct: 8 DLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILY 67
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
L CLC G +A S + M
Sbjct: 68 NNLISCLCKAGMLAEAE------------------------------------SYLKRMP 91
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
HC PN+ + N ++ Y + KA E G P P + YSS
Sbjct: 92 QHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEEL-----------GHP--PTPHAYSS 138
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 602
++++ V+ M GC+ D LL RA K H F S+ G
Sbjct: 139 IVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 198
Query: 603 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE--SNEDRISR-- 658
P + + M+ ++AV L+ M T +T L + R+ +
Sbjct: 199 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAY 258
Query: 659 DKLEKLLNALCNCN--AASSEITVSNLSRA 686
+ EK+ C C A S I ++ L +A
Sbjct: 259 EVFEKMAEGPCPCTEPAYSVLILINGLCKA 288
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 76/185 (41%), Gaps = 16/185 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL L + +A+ + ML+ P++ Y + +L + ++E KL+
Sbjct: 312 TYNTLLEGLLSTAKLQDAMELTYFMLDQVP-APNMFTYEILISSLCKTDQVEEAFKLLSA 370
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR K P L ++ +L+ + + F ++K++ + +
Sbjct: 371 MRDKG---------------FVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLV 415
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+ + ++ +L+ G D +F ++M +G TY LV +GK ++A V
Sbjct: 416 GSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEE 475
Query: 410 MEQRG 414
+ + G
Sbjct: 476 LVRDG 480
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 15/241 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ YN ++N + K ++ ++ GL P+ +Y M + G Y
Sbjct: 339 PDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGM 398
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
++A+ GE ++Y + G+I+ A+ M ++GV A +Y L LC
Sbjct: 399 LFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCK 458
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIG 490
NGR+ L++ ++ R+ +P F L+ + G +D+ I IF+ ++ +P I
Sbjct: 459 NGRFPAMKLLLSEMLD-RNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIV 517
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
NAM+K + + + A + + + PDEYTYS++++
Sbjct: 518 GYNAMIKGFCKFGKMTDALSCLNKMKNVHHA-------------PDEYTYSTVIDGYVKQ 564
Query: 551 H 551
H
Sbjct: 565 H 565
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK----RIKNMHRKNWDPVL---- 310
PDI Y+++ + G +KE + +E+ +++ P+K + + + K D V
Sbjct: 339 PDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGM 398
Query: 311 ---------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
+PDLV Y A ++ V + V +++ + G+ P A Y + M + +
Sbjct: 399 LFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCK 458
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+G++ + +M + L+ F G+++EA+ + + ++GV
Sbjct: 459 NGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVG 518
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QH 480
Y + C G+ DA+ + K+K++ H+ P E T++ +I + + + +F Q
Sbjct: 519 YNAMIKGFCKFGKMTDALSCLNKMKNVHHA-PDEYTYSTVIDGYVKQHDMSSALKMFGQM 577
Query: 481 MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 540
MK +PN+ T +++ + + +A+++F + L P+ TY
Sbjct: 578 MKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFD-------------LVPNVVTY 624
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++++ A + E +++ M ++GC + +L+
Sbjct: 625 TTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLI 663
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/639 (16%), Positives = 234/639 (36%), Gaps = 91/639 (14%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRV------LVDRLSEREMTAK--NW 175
+N+++ D +++ K +W R + V ++DR+ + E+ K +W
Sbjct: 25 INYLVSDVIRI-----LKTHQWQDSLESRFAESKVVVSDVAHFVIDRVHDAELALKFFDW 79
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
R + S +LKLL S+R + + +K + +R ++ L+
Sbjct: 80 ASTRPFSCSLDGVAHSSLLKLL------ASFRVFPEIELVLENMKAQHLKPTREAFSALI 133
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
G++G AL++F+ + E N P + A +S+ L + G + ++L ++M Q
Sbjct: 134 LAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDD 193
Query: 296 ---------------KRIKNMHR---------KNWDPVLEPDLVVYNAVLNACVPSHQWK 331
K + N+ + W P +V YN +++ +
Sbjct: 194 GTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQ 253
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLV 391
K+L+ G+ P+ TYG + ++G+++ V + +MA G + + ++
Sbjct: 254 CATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVI 313
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK----- 446
A ++ G + +A +R M + G + Y + C GR ++A +EK K
Sbjct: 314 DAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLL 373
Query: 447 -------SLRHS----------------------KPLEITFTGLIISSMDGGHIDDCISI 477
L H+ KP +++ I + G ID + +
Sbjct: 374 PNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMV 433
Query: 478 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
+ M + P+ N ++ +N F K L E N ++PD
Sbjct: 434 REKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRN-------------VQPD 480
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
Y ++++++ + + ++K + G + ++ + GK +
Sbjct: 481 VYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLN 540
Query: 597 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRI 656
+ P ++ ++ + Q + A+ + M F +T L +
Sbjct: 541 KMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA 600
Query: 657 SRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 695
+ EK+ + + + + +T + L + EK
Sbjct: 601 DMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEK 639
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 115/261 (44%), Gaps = 16/261 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD+V +N +L+ + +F Q+ ++ +P+ T+ M + + G+
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG-VVGTASVYYELACC 428
+M + G +TY +V ++G A+ +R ME+ ++ +Y +
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
LC +GR DA + +++ + P T+ +I+ G D + Q M + P
Sbjct: 265 LCKDGRHSDAQNLFTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++ T NA++ + + F +A+EL++E + P+ TYSSM++
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRG-------------IIPNTITYSSMIDGF 370
Query: 548 ATAHQWEYFEYVYKGMALSGC 568
++ + E+++ MA GC
Sbjct: 371 CKQNRLDAAEHMFYLMATKGC 391
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 180/452 (39%), Gaps = 48/452 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ LL L R EAL +F+ M E P++ + ++ L + G + E V L++RM
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFET-TCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 291 RQ---KPSK----RIKNMHRKNWDPV--------------LEPDLVVYNAVLNACVPSHQ 329
+ +P++ I + K D V + P++V+Y+A++++ +
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+F ++++ G+ P TY + SG++ + ++M + + +TY
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ AF +EGK EA M RG++ Y + C R DA + + + +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMATK 389
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 508
P ITF LI IDD + + M + + T N ++ + + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM----- 563
+L +E SSG L PD T ++L+ + + ++K M
Sbjct: 450 LDLLQEMI---SSG----------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 564 ------ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+G + D + L+ GK E ++ + G +P + ++ M+
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 618 IVQSNYEKAVALINAMAYAPFHITERQWTELF 649
QS ++A + ++M F +T L
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/467 (18%), Positives = 185/467 (39%), Gaps = 55/467 (11%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R L++ L + + M + GL T+ ++ G+ KG
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A+++L + + + + +Y+ ++ L K GR +A +F M E ++PD+ Y
Sbjct: 237 SALNLLRKMEEVS--HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ V G + +L++ M + RK + PD+V YNA++NA V
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEM----------LERK-----ISPDVVTYNALINAFVKE 338
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ ++ ++ G+ P+ TY ++ + + D F MA G + +T+
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + +I++ + + M + G+V + Y L G A+ +++++ S
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSK 507
P +T L+ D G + D + +F+ M+ K
Sbjct: 459 -SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ------------------------K 493
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+K+ + + N ++PD TY+ ++ ++ E +Y+ M G
Sbjct: 494 SKKDLDASHPFNG------------VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
D ++ ++ + + FDS+ P+ + FT ++
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 145/339 (42%), Gaps = 26/339 (7%)
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+L+ ++ RM ++P I ++++K + D+ + ++ + F +L
Sbjct: 84 KLMGVVVRM-ERPDLVI-SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLT 141
Query: 342 KSGLKPSAATY-----GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
K GL P T+ GL +E + S +L H+ F + +T+ L+
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRV-SEALNLFHQMFETTCRPN----VVTFTTLMNGLCR 196
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
EG+I EAVA + M + G+ T Y + +C G A+ ++ K++ + H P +
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
++ +I S G D ++F M++ P++ T N+M+ + + +S A++L +E
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
S PD TY++++ A ++ E +Y M G + +
Sbjct: 317 LERKIS-------------PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ ++ + + EH F + G P+ + F ++
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/325 (18%), Positives = 134/325 (41%), Gaps = 16/325 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V + ++ V + V +++++ + ++ ++ + ++ K
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F K+ K G +T+ L+ E +++EA+ M + + L LC
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNI 489
GR +A+ +++++ +P +IT+ ++ G +++ + M++ H PN+
Sbjct: 197 EGRIVEAVALLDRMME-DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+A++ ++ S A+ LF E + PD +TY+SM+ +
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-------------IFPDLFTYNSMIVGFCS 302
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ +W E + + M D + L+ + GK E +D +L G IP+ +
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 610 FTEMLIQAIVQSNYEKAVALINAMA 634
++ M+ Q+ + A + MA
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMA 387
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ G + AL + M+ L PDI ++ L G LK+ +++ + M
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK K + H N +EPD+ YN +++ + ++ +++++ G+ P
Sbjct: 492 -QKSKKDLDASHPFNG---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ + + + D + F M + +T+ L+ + + G++++ + M
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+RG+V A Y L C G A+ + +++ S
Sbjct: 608 GRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 149/401 (37%), Gaps = 56/401 (13%)
Query: 181 MNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
M + G+ +FT M+ G G W A +L + K D+ + Y L+
Sbjct: 281 MQEKGIFPDLFTYNSMIV---GFCSSGRWSDAEQLLQEMLERKISPDVVT---YNALINA 334
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--- 294
K G+ EA +++ ML + P+ Y S+ + L + M K
Sbjct: 335 FVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 295 --------------SKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+KRI + + + + L D YN +++ +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA-----------LT 386
+++ SGL P T ++ + +GK E F+ M KS + + A T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y +L+ EGK EA M RG+V Y + LC R +A + + +
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF 505
S S P +TFT LI G +DD + +F M + N T ++ + +
Sbjct: 574 SKSFS-PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ A ++F+E SSG + PD T +ML
Sbjct: 633 NGALDIFQEMI---SSG----------VYPDTITIRNMLTG 660
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 101/255 (39%), Gaps = 24/255 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ ++E + A + +++ L+ L LL+ + G ++ + GL
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D LK ++ ++ K+ + +A FN + PD+ Y+ + L G
Sbjct: 477 DNGKLKDAL---EMFKVMQKSKKDLDASHPFN------GVEPDVQTYNILISGLINEGKF 527
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E +L E M HR + PD + Y+++++ + +F +
Sbjct: 528 LEAEELYEEMP----------HRG-----IVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
P+ T+ + ++G+ D E F +M + G A+TY L+ F + G I
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 401 NEAVAAVRNMEQRGV 415
N A+ + M GV
Sbjct: 633 NGALDIFQEMISSGV 647
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 115/261 (44%), Gaps = 16/261 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L PD+V +N +L+ + +F Q+ ++ +P+ T+ M + + G+
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG-VVGTASVYYELACC 428
+M + G +TY +V ++G A+ +R ME+ ++ +Y +
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
LC +GR DA + +++ + P T+ +I+ G D + Q M + P
Sbjct: 265 LCKDGRHSDAQNLFTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++ T NA++ + + F +A+EL++E + P+ TYSSM++
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRG-------------IIPNTITYSSMIDGF 370
Query: 548 ATAHQWEYFEYVYKGMALSGC 568
++ + E+++ MA GC
Sbjct: 371 CKQNRLDAAEHMFYLMATKGC 391
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 180/452 (39%), Gaps = 48/452 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ LL L R EAL +F+ M E P++ + ++ L + G + E V L++RM
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFET-TCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 291 RQ---KPSK----RIKNMHRKNWDPV--------------LEPDLVVYNAVLNACVPSHQ 329
+ +P++ I + K D V + P++V+Y+A++++ +
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
+F ++++ G+ P TY + SG++ + ++M + + +TY
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
L+ AF +EGK EA M RG++ Y + C R DA + + + +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMATK 389
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 508
P ITF LI IDD + + M + + T N ++ + + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM----- 563
+L +E SSG L PD T ++L+ + + ++K M
Sbjct: 450 LDLLQEMI---SSG----------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 564 ------ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 617
+G + D + L+ GK E ++ + G +P + ++ M+
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 618 IVQSNYEKAVALINAMAYAPFHITERQWTELF 649
QS ++A + ++M F +T L
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/467 (18%), Positives = 185/467 (39%), Gaps = 55/467 (11%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R L++ L + + M + GL T+ ++ G+ KG
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A+++L + + + + +Y+ ++ L K GR +A +F M E ++PD+ Y
Sbjct: 237 SALNLLRKMEEVS--HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ V G + +L++ M + RK + PD+V YNA++NA V
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEM----------LERK-----ISPDVVTYNALINAFVKE 338
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ ++ ++ G+ P+ TY ++ + + D F MA G + +T+
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + +I++ + + M + G+V + Y L G A+ +++++ S
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSK 507
P +T L+ D G + D + +F+ M+ K
Sbjct: 459 -SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ------------------------K 493
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+K+ + + N ++PD TY+ ++ ++ E +Y+ M G
Sbjct: 494 SKKDLDASHPFNG------------VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
D ++ ++ + + FDS+ P+ + FT ++
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 145/339 (42%), Gaps = 26/339 (7%)
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+L+ ++ RM ++P I ++++K + D+ + ++ + F ++
Sbjct: 84 KLMGVVVRM-ERPDLVI-SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKIT 141
Query: 342 KSGLKPSAATY-----GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
K GL P T+ GL +E + S +L H+ F + +T+ L+
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRV-SEALNLFHQMFETTCRPN----VVTFTTLMNGLCR 196
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
EG+I EAVA + M + G+ T Y + +C G A+ ++ K++ + H P +
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
++ +I S G D ++F M++ P++ T N+M+ + + +S A++L +E
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
S PD TY++++ A ++ E +Y M G + +
Sbjct: 317 LERKIS-------------PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ ++ + + EH F + G P+ + F ++
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/325 (18%), Positives = 134/325 (41%), Gaps = 16/325 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P +V + ++ V + V +++++ + ++ ++ + ++ K
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F K+ K G +T+ L+ E +++EA+ M + + L LC
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNI 489
GR +A+ +++++ +P +IT+ ++ G +++ + M++ H PN+
Sbjct: 197 EGRIVEAVALLDRMME-DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
+A++ ++ S A+ LF E + PD +TY+SM+ +
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-------------IFPDLFTYNSMIVGFCS 302
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ +W E + + M D + L+ + GK E +D +L G IP+ +
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 610 FTEMLIQAIVQSNYEKAVALINAMA 634
++ M+ Q+ + A + MA
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMA 387
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ G + AL + M+ L PDI ++ L G LK+ +++ + M
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK K + H N +EPD+ YN +++ + ++ +++++ G+ P
Sbjct: 492 -QKSKKDLDASHPFNG---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ + + + D + F M + +T+ L+ + + G++++ + M
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
+RG+V A Y L C G A+ + +++ S
Sbjct: 608 GRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 149/401 (37%), Gaps = 56/401 (13%)
Query: 181 MNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
M + G+ +FT M+ G G W A +L + K D+ + Y L+
Sbjct: 281 MQEKGIFPDLFTYNSMIV---GFCSSGRWSDAEQLLQEMLERKISPDVVT---YNALINA 334
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--- 294
K G+ EA +++ ML + P+ Y S+ + L + M K
Sbjct: 335 FVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 295 --------------SKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+KRI + + + + L D YN +++ +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA-----------LT 386
+++ SGL P T ++ + +GK E F+ M KS + + A T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y +L+ EGK EA M RG+V Y + LC R +A + + +
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF 505
S S P +TFT LI G +DD + +F M + N T ++ + +
Sbjct: 574 SKSFS-PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 506 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
+ A ++F+E SSG + PD T +ML
Sbjct: 633 NGALDIFQEMI---SSG----------VYPDTITIRNMLTG 660
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 101/255 (39%), Gaps = 24/255 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ ++E + A + +++ L+ L LL+ + G ++ + GL
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D LK ++ ++ K+ + +A FN + PD+ Y+ + L G
Sbjct: 477 DNGKLKDAL---EMFKVMQKSKKDLDASHPFN------GVEPDVQTYNILISGLINEGKF 527
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E +L E M HR + PD + Y+++++ + +F +
Sbjct: 528 LEAEELYEEMP----------HRG-----IVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
P+ T+ + ++G+ D E F +M + G A+TY L+ F + G I
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 401 NEAVAAVRNMEQRGV 415
N A+ + M GV
Sbjct: 633 NGALDIFQEMISSGV 647
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 152/371 (40%), Gaps = 28/371 (7%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ + L +G+ P A + + M M++SGK F +M + G +T+ L+
Sbjct: 99 YAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSG 158
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ +N A A M + G+ Y LC GR QDAM + E++ R P
Sbjct: 159 MCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCE-RGLNP 217
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ T LI + G + + + M + ++ NA++ + R A ++
Sbjct: 218 NTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIV 277
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
EE + DG LKPD+ TY+++++ + + + + M+ G LD
Sbjct: 278 EEMRK-----------DG--LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDD 324
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI-----VQSNYEKAV 627
+ L+ S+AG+ E ++EAG P +T M+I A V++ ++
Sbjct: 325 VTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYT-MVIDAFCKNGDVKTGFKHLK 383
Query: 628 ALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 687
+ N P +T F S + D LLNA+ N ++IT + L L
Sbjct: 384 EMQNK-GKNPGIVTYNVVMNGFCSLGQMKNAD---MLLNAMLNIGVCPNDITYNIL---L 436
Query: 688 HALCRSEKERD 698
C+ K RD
Sbjct: 437 DGHCKHGKVRD 447
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 26/259 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L++ + G A +V D + +R ++ V + L++ + KA + A + LM
Sbjct: 120 LMRDMIRSGKLASARNVFDEML----RRGVQPTVVTFNTLMSGMCKASDLNNANALRGLM 175
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRI----KNMHRKNWD 307
+ + PD+ Y + L + G +++ +++ E M ++ P+ + + H K D
Sbjct: 176 AK-AGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 234
Query: 308 PV-------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
++ DLV YNA++N K + +++RK GLKP TY
Sbjct: 235 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT 294
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + G+ D E ++M+ G A+ +TY L+ + G+ +A + M + G
Sbjct: 295 LIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAG 354
Query: 415 VVGTASVYYELACCLCNNG 433
+ + Y + C NG
Sbjct: 355 LQPDNTTYTMVIDAFCKNG 373
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/211 (17%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ AY+++ +V +K ++E MR+ L+PD V Y +++
Sbjct: 253 DLVAYNALVNGFCRVRDMKAANDIVEEMRKDG---------------LKPDKVTYTTLID 297
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
C + + +++ G+ TY + + ++G+ +M ++G
Sbjct: 298 GCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQP 357
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
TY +++ AF + G + ++ M+ +G Y + C+ G+ ++A +++
Sbjct: 358 DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLL 417
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
+ ++ P +IT+ L+ G + D
Sbjct: 418 NAMLNIGVC-PNDITYNILLDGHCKHGKVRD 447
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 11/120 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L+PD Y V++A + K F K+++ G P TY + M G+
Sbjct: 355 LQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNAD 414
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ----RGVVGTASVYYEL 425
M G +TY +L+ + GK VR+ E+ +G+V VY L
Sbjct: 415 MLLNAMLNIGVCPNDITYNILLDGHCKHGK-------VRDTEELKSAKGMVSDFGVYTSL 467
>gi|77552783|gb|ABA95579.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 697
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 26/243 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP----DIAAYHSVAVTLGQVGLLKELVK 285
VYT L+ AGR + + + M + P D Y +V TL G ++
Sbjct: 353 VYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARA 412
Query: 286 LIERMRQK---PSKRIKNMHRKNW------------------DPVLEPDLVVYNAVLNAC 324
++E M Q S+ N+ K + + ++PD+V YN +++ C
Sbjct: 413 VLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGC 472
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE-AIG 383
V + G +F ++R+ G+ PSA +Y M+ SG+ L H+ F +M K A+
Sbjct: 473 VLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVD 532
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+ +LV A+ G + A V M+ RGV + Y LA + R +A+L+ E
Sbjct: 533 RAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWE 592
Query: 444 KIK 446
+IK
Sbjct: 593 EIK 595
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 124/338 (36%), Gaps = 66/338 (19%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD +NA L+AC + +F Q+ P A TY + +++ ++G+ DLV
Sbjct: 201 PDTAAFNAALSACANAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVARV 260
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR------------------ 413
++ SG A T+ LV A+ G I A V+ M +R
Sbjct: 261 LHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVADDHIIS 320
Query: 414 -------------------------GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ VY L N GR +D VV ++++
Sbjct: 321 HDQQSCVLEDIVKPWEQEEVPLLPKAYPPNSRVYTTLMKGYMNAGRVED---VVAMLRAM 377
Query: 449 RH-------SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
R S+P +T+T +I + + G ++ ++ + M + + T N ++K Y
Sbjct: 378 RREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYC 437
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ KAKEL + A ++PD TY+++++ ++
Sbjct: 438 QQLQAGKAKELLA------------VDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALF 485
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
M G + L+ + +G+ L FD +
Sbjct: 486 NEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEM 523
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++++ S YT L+ +G+P A ++F+ M +D + D AA++ + ++G
Sbjct: 488 MRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLG 547
Query: 279 LLKELVKLIERMRQKP-----------SKRIKNMHRKN-----WDPVLEP--DLVVYNAV 320
LL+ K++ERM+ + +K I R W+ + E D V A+
Sbjct: 548 LLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDGEVVEAL 607
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ CV + ++ + ++ + G++P+ A Y
Sbjct: 608 ADVCVRAALFRKALEMVARMEEMGVEPNKAKY 639
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 144/375 (38%), Gaps = 42/375 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y ++A GR + I M E + PD Y +V +VG +++ K+ +
Sbjct: 149 TYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDE 208
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + +EP+ V+YNA++ + ++ G+ +
Sbjct: 209 MLTEGK--------------VEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTV 254
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
ATY L + + G+ H +M + G A A TY +L+ + +EGK +A+
Sbjct: 255 ATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEV 314
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M +G+ T Y L L G Q+ L + ++ R +P + LI S G
Sbjct: 315 MVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVR--RGIRPDLFMYNALINSHCTG 372
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN-------- 519
G +D I M K P+ T N +++ +A+ L EE T+
Sbjct: 373 GDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSY 432
Query: 520 ---SSGYTFLSGD------------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
SGY+ + GD G P TY++M++ Q E + K M
Sbjct: 433 NTLISGYS-MKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMV 491
Query: 565 LSGCQLDQTKHAWLL 579
+G D + + L+
Sbjct: 492 GNGITPDDSTYISLI 506
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 153/392 (39%), Gaps = 39/392 (9%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S + +L L AG+P AL + M P+ Y++V G ++ +++
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMPS-----PNAVTYNTVIAGFCARGRVQAGIEI 169
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG-L 345
+ MR++ + PD Y V++ + + VF ++ G +
Sbjct: 170 MREMRERGG--------------IAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
+P+A Y + G ++ + +M G ++ TY + V + EG+ EA A
Sbjct: 216 EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHA 275
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLII 463
V M ++G+ A Y L C G+ + AM + E + K +R + +T+T LI
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATV---VTYTSLIH 332
Query: 464 SSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+ G + + +F ++ P++ NA++ + +A E+ E +
Sbjct: 333 ALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKR--- 389
Query: 523 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 582
+ PD+ TY++++ + + + + M G Q D + L+
Sbjct: 390 ----------ITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGY 439
Query: 583 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
S G D ++ G P L + M+
Sbjct: 440 SMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMI 471
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 143/365 (39%), Gaps = 52/365 (14%)
Query: 218 GLKDKRDLKSR-------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS- 269
G++ R+++ R + Y +++ K G+ +A ++F+ ML + + P+ Y++
Sbjct: 166 GIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNAL 225
Query: 270 ------------------------VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
V++T+ L + +E + ++ M K
Sbjct: 226 IGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTL-FMEGRAAEAHALVEEMGEKG 284
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
L PD YN ++N + K +F+ + G++ + TY + + G
Sbjct: 285 ----LAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMV 340
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
F + G Y L+ + G ++ A + ME++ + Y L
Sbjct: 341 QETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTL 400
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDH 484
LC GR +A ++E++ R +P +++ LI G I D + + + M
Sbjct: 401 MRGLCLLGRLDEARGLIEEMTK-RGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKG 459
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
P + T NAM+K N A++L +E + G+G + PD+ TY S++
Sbjct: 460 FNPTLLTYNAMIKGLCLNGQGGDAEDLVKE-----------MVGNG--ITPDDSTYISLI 506
Query: 545 EASAT 549
E T
Sbjct: 507 EGLTT 511
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/324 (18%), Positives = 121/324 (37%), Gaps = 23/324 (7%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
L + A L+ + S F +F + + L S T+ + + + +GK E R
Sbjct: 81 LPIPTASLHPLLSSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLR 140
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL---C 430
+M A+TY ++ F G++ + +R M +RG G A Y A + C
Sbjct: 141 QMPSPN----AVTYNTVIAGFCARGRVQAGIEIMREMRERG--GIAPDKYTYATVISGWC 194
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 489
G+ +DA V +++ + +P + + LI D G+++ + M D +
Sbjct: 195 KVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTV 254
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N + ++A L EE L PD +TY+ ++
Sbjct: 255 ATYNLFVHTLFMEGRAAEAHALVEEMGEKG-------------LAPDAFTYNILINGYCK 301
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ + +++ M G + + L+ S G + F+ + G P
Sbjct: 302 EGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFM 361
Query: 610 FTEMLIQAIVQSNYEKAVALINAM 633
+ ++ + ++A ++ M
Sbjct: 362 YNALINSHCTGGDMDRAFEIMGEM 385
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 21/256 (8%)
Query: 143 VEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGD 202
VE EK +A +L++ + K K +M G+ T L+ L
Sbjct: 277 VEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSM 336
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSR-FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
KG ++ D ++ +R ++ F+Y L+ G A I M E +
Sbjct: 337 KGMVQET----DRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM-EKKRIT 391
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD Y+++ L +G L E LIE M ++ ++PDLV YN ++
Sbjct: 392 PDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRG---------------IQPDLVSYNTLI 436
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+ K V ++ G P+ TY ++ + +G+ + ++M +G
Sbjct: 437 SGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGIT 496
Query: 382 IGALTYKVLVRAFWEE 397
TY L+ E
Sbjct: 497 PDDSTYISLIEGLTTE 512
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 182/445 (40%), Gaps = 44/445 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL +G A+ VLD + K + +Y +L ++G ++R+ M
Sbjct: 117 VVRGLCTRGRIADALEVLDEM-SFKGCAPIPP--MYHVILEAACRSGGFRNSVRVLEAMH 173
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C L D + V + + G + E V L+ ++ E D+
Sbjct: 174 AKGCTL--DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGC---------------EADI 216
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YNAVL + +W V + ++ + P+ T+ + + ++G ++ VHE +
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M++ G Y ++ +EG + A + M G+ Y + LC+ R
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 435 WQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
W++A ++ ++ + PL ++TF L+ G +D I + + M H C P++ T
Sbjct: 337 WKEAEELLSEM--FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ + + + +A L + + KP+ +Y+ +L+ +A +
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGC-------------KPNTVSYTIVLKGLCSAGR 441
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLF 609
W E + M GC + L+ + G L+E A + L L G P +
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG---LVEQAIELLKQMLVNGCSPDLIS 498
Query: 610 FTEMLIQAIVQSNYEKAVALINAMA 634
++ ++ E+A+ L+N M
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMV 523
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 168/417 (40%), Gaps = 63/417 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAG---RPHEALRIF 251
+LKGL W ++D + + D V + L+ L + G R HE L
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMV----RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA-- 275
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ + PDI Y ++ + + G L+ +++ RM PS +K
Sbjct: 276 --QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM---PSYGLK------------ 318
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P++V YN VL + +WK + ++ + T+ + ++ Q+G D V E
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M G +TY ++ F +EG I+EAV +++M G Y + LC+
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
GRW DA ++ ++ + P +TF LI G ++ I + + M + C P++
Sbjct: 439 AGRWVDAEELMSQMIQ-QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF--------LSGDG------------ 530
+ + ++ + +A EL S T LS +G
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557
Query: 531 --APLKPDEYTYSSMLEASATAHQWE------YFEYVYKGMALSGCQLDQTKHAWLL 579
++ D Y++++ S+ +WE +F Y M +GC +++ + L+
Sbjct: 558 KDTTIRSDAVLYNAVI--SSLCKRWETDRAIDFFAY----MVSNGCMPNESTYTMLI 608
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 140/350 (40%), Gaps = 32/350 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L +F M ++ P + + ++ + G + + L++ M
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQM-QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L+ D+V+YN +++ + + F ++ +GLKP
Sbjct: 230 KSSS---------------LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + V+ ++ + D E F + K+ Y ++ + GK +EA + +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+G + + Y + CL G+ +A+ V E++K + + P T+ LI G
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK--KDAAPNLSTYNILIDMLCRAGK 392
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+D + M K PN+ TVN M+ ++ +A +FEE D
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM-------------D 439
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
PDE T+ S+++ + + VY+ M S C+ + + L+
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 162/388 (41%), Gaps = 35/388 (9%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ L+ LGK GR +A +++ ML+ DC +S+ T L+K
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT-------NSIVYT----SLIK---NFFN 494
Query: 289 RMRQKPSKRI-KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
R++ +I K+M +N PDL + N ++ + + + +F++++ P
Sbjct: 495 HGRKEDGHKIYKDMINQNC----SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
A +Y + + ++++G + +E F M + G + Y +++ F + GK+N+A +
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
M+ +G T Y + L R +A ++ E+ KS R + + ++ LI
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV-VIYSSLIDGFGK 669
Query: 468 GGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G ID+ I + M+ PN+ T N++L D KA+E+ N + F
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLL------DALVKAEEI-------NEALVCFQ 716
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
S P++ TY ++ ++ ++ M G + + ++ ++AG
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEML 614
FD G +P + M+
Sbjct: 777 NIAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 136/327 (41%), Gaps = 24/327 (7%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+R+ +A + +L+ L + + ++ M + G + ++ G G +
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A +L+ +K K + Y ++ L K R EA +F + + ++ Y
Sbjct: 606 AYQLLEE---MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE-EAKSKRIELNVVIYS 661
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S+ G+VG + E ++E + QK L P+L +N++L+A V +
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKG---------------LTPNLYTWNSLLDALVKAE 706
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ F+ +++ P+ TYG+ + + + K++ F+++M K G ++Y
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
++ + G I EA A + G V ++ Y + L N R DA + E+ +
Sbjct: 767 TMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR-- 824
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCI 475
R P+ + +D H +DC+
Sbjct: 825 RRGLPIH---NKTCVVLLDTLHKNDCL 848
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/446 (19%), Positives = 182/446 (40%), Gaps = 59/446 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A S+L+ + K + S Y +L L K G+ EAL++F M
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQ---RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P+++ Y+ + L + G L +L + M++ L P++
Sbjct: 371 KDAA--PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG---------------LFPNVR 413
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ S + +F+++ P T+ ++ + + G+ D ++ + KM
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
S ++ Y L++ F+ G+ + ++M + + C+ G
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+ + E+IK+ R P +++ LI + G ++ +F MK+ C + N
Sbjct: 534 EKGRAMFEEIKA-RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + + +KA +L EE + G+ +P TY S+++ A
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEM---KTKGF----------EPTVVTYGSVIDGLA------ 633
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEIPHPLFF 610
++D+ A++L E +++ + L + SL++ G I
Sbjct: 634 --------------KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYA 636
E L+Q + N +L++A+ A
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKA 705
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 131/301 (43%), Gaps = 20/301 (6%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQV 277
+K +R + Y+ L+ L KAG +E +F M E C L D AY+ V +
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL--DTRAYNIVIDGFCKC 600
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + + +L+E M+ K EP +V Y +V++ + + +F
Sbjct: 601 GKVNKAYQLLEEMKTKG---------------FEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
++ + ++ + Y ++ + G+ D + ++ + G T+ L+ A +
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
+INEA+ ++M++ Y L LC ++ A + ++++ + KP I+
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK-QGMKPSTIS 764
Query: 458 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+T +I G+I + ++F K + P+ NAM++ S + A LFEET
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Query: 517 R 517
R
Sbjct: 825 R 825
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 147/370 (39%), Gaps = 28/370 (7%)
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
CV +++ + + V + +RK +P+ + Y + D++ F++M + G
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEP 201
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ L+R F +EG+++ A++ + M+ + +Y G+ A
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF 261
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
+I++ KP E+T+T +I +D+ + +F+H+ K+ P N M+ Y
Sbjct: 262 HEIEA-NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
F +A L E RA S P Y+ +L + + V++
Sbjct: 321 AGKFDEAYSLLER-QRAKGS------------IPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAI 618
M + + + L+ RAGK L+ AF DS+ +AG P+ M+ +
Sbjct: 368 EMKKDAAP-NLSTYNILIDMLCRAGK---LDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 619 VQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR-----DKLEKLLNALCNCNA 673
++A A+ M Y E + L + ++ R EK+L++ C N+
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG-LGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 674 ASSEITVSNL 683
+ N
Sbjct: 483 IVYTSLIKNF 492
>gi|115486864|ref|NP_001065238.1| Os12g0102600 [Oryza sativa Japonica Group]
gi|113648426|dbj|BAF28938.1| Os12g0102600, partial [Oryza sativa Japonica Group]
Length = 712
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 26/243 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP----DIAAYHSVAVTLGQVGLLKELVK 285
VYT L+ AGR + + + M + P D Y +V TL G ++
Sbjct: 368 VYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARA 427
Query: 286 LIERMRQK---PSKRIKNMHRKNW------------------DPVLEPDLVVYNAVLNAC 324
++E M Q S+ N+ K + + ++PD+V YN +++ C
Sbjct: 428 VLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGC 487
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE-AIG 383
V + G +F ++R+ G+ PSA +Y M+ SG+ L H+ F +M K A+
Sbjct: 488 VLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVD 547
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+ +LV A+ G + A V M+ RGV + Y LA + R +A+L+ E
Sbjct: 548 RAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWE 607
Query: 444 KIK 446
+IK
Sbjct: 608 EIK 610
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 124/338 (36%), Gaps = 66/338 (19%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD +NA L+AC + +F Q+ P A TY + +++ ++G+ DLV
Sbjct: 216 PDTAAFNAALSACANAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVARV 275
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR------------------ 413
++ SG A T+ LV A+ G I A V+ M +R
Sbjct: 276 LHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVADDHIIS 335
Query: 414 -------------------------GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ VY L N GR +D VV ++++
Sbjct: 336 HDQQSCVLEDIVKPWEQEEVPLLPKAYPPNSRVYTTLMKGYMNAGRVED---VVAMLRAM 392
Query: 449 RH-------SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
R S+P +T+T +I + + G ++ ++ + M + + T N ++K Y
Sbjct: 393 RREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYC 452
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ KAKEL + A ++PD TY+++++ ++
Sbjct: 453 QQLQAGKAKELLA------------VDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALF 500
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
M G + L+ + +G+ L FD +
Sbjct: 501 NEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEM 538
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++++ S YT L+ +G+P A ++F+ M +D + D AA++ + ++G
Sbjct: 503 MRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLG 562
Query: 279 LLKELVKLIERMRQKP-----------SKRIKNMHRKN-----WDPVLEP--DLVVYNAV 320
LL+ K++ERM+ + +K I R W+ + E D V A+
Sbjct: 563 LLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDGEVVEAL 622
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ CV + ++ + ++ + G++P+ A Y
Sbjct: 623 ADVCVRAALFRKALEMVARMEEMGVEPNKAKY 654
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 161/399 (40%), Gaps = 35/399 (8%)
Query: 213 LDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLY---PDIAAYH 268
+++VY KR ++ + + ++ L K G+ + A + +ED ++ P++ Y+
Sbjct: 139 MEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV----IEDMKVWGVSPNVITYN 194
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ ++G + ++ K +++ +K I P+ V YN +++
Sbjct: 195 TLIDGYCKMGRIGKMYKADAILKEMVAKGIC------------PNEVTYNILIDGFCKDE 242
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
G VF ++++ GL+P+ TY + + + GK D +M S +T+
Sbjct: 243 NVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHN 302
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
VL+ F + +NEA+ +ME++GV A Y L C +GR +DA + +
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMID- 361
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 507
R P T+ LI G + S+ M ++ T N ++ + K
Sbjct: 362 RGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRK 421
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
A +L +E F G L P TY+++++ V M G
Sbjct: 422 AVKLLDE---------MFEKG----LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKG 468
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
Q + H L+ G+ + +LE G +P+
Sbjct: 469 KQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPN 507
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K GR +A ++N+M+ D ++P+++ Y+ + L + G +K L+ M
Sbjct: 336 YTTLIDAYCKDGRMEDAFALYNMMI-DRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEM 394
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K L D+V YN ++++ + + + ++ + GL PS
Sbjct: 395 VSKK---------------LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHV 439
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY M+ + G +M + G+ +T+ VL++ F +G++ +A + M
Sbjct: 440 TYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEM 499
Query: 411 EQRGVVGTASVY 422
+RG+V + Y
Sbjct: 500 LERGLVPNRTTY 511
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/336 (18%), Positives = 143/336 (42%), Gaps = 23/336 (6%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
L+ N +L+ V + + +V++++ K ++ + ++ + + + + GK + +
Sbjct: 120 LISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIE 179
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKIN---EAVAAVRNMEQRGVVGTASVYYELACCLC 430
M G + +TY L+ + + G+I +A A ++ M +G+ Y L C
Sbjct: 180 DMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFC 239
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 489
+ AM V +++ + +P +T+ LI G +D+ +++ M EPN+
Sbjct: 240 KDENVSGAMRVFGEMQR-QGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNV 298
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T N ++ + +N ++A LF + + + P+ TY+++++A
Sbjct: 299 VTHNVLINGFCKNKTVNEAINLFNDMEKQG-------------VDPNAMTYTTLIDAYCK 345
Query: 550 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 609
+ E +Y M G + + + L+ R G + ++ + ++ +
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMV-SKKLSADVV 404
Query: 610 FTEMLIQAIVQSN-YEKAVALINAM---AYAPFHIT 641
+LI ++ + KAV L++ M P H+T
Sbjct: 405 TYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVT 440
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 159/398 (39%), Gaps = 51/398 (12%)
Query: 225 LKSRFV------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+KSR V +T L+ +AG EA+ FN M ED PD A+ V L +
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM-EDYGCVPDKIAFSIVISNLSRKR 235
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
E + ++ + EPD++VY ++ + + VFK
Sbjct: 236 RASEAQSFFDSLKDR----------------FEPDVIVYTNLVRGWCRAGEISEAEKVFK 279
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
+++ +G++P+ TY + ++ + + G+ H+ F M SG A A+T+ L+R + G
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-- 456
+ + + M++ G Y L C + ++A+ V+ + K E+
Sbjct: 340 RTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMI----KKKCEVNA 395
Query: 457 -TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKEL 511
TF + ++ ++ M + CEPN T N +++++ DM K K+
Sbjct: 396 STFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKK- 454
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
D ++P+ TY ++ W ++K M C
Sbjct: 455 ---------------EMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTP 499
Query: 572 Q-TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + +L + RAG+ E + +++ G + PL
Sbjct: 500 SLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 146/416 (35%), Gaps = 87/416 (20%)
Query: 298 IKNMHRKNW----DPVLEPDLV-------------------VYNAVLNAC------VPSH 328
IK+ +RKN D +L P L V V+ C +P H
Sbjct: 72 IKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLH 131
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
Q F+ + R S Y +++ + ++DL M I T+
Sbjct: 132 QSLA-FFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFT 190
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+L+R + G +EAV ME G V
Sbjct: 191 ILIRRYVRAGLASEAVHCFNRMEDYGCV-------------------------------- 218
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKA 508
P +I F+ +I + + S F +KD EP++ +++ + R S+A
Sbjct: 219 ----PDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEA 274
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+++F+E A ++P+ YTYS +++A Q V+ M SGC
Sbjct: 275 EKVFKEMKLAG-------------IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
+ L+ +AG+ + ++ + + G P + + ++ N E AV
Sbjct: 322 APNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVK 381
Query: 629 LINAMAYAPFHITERQWTELFESNEDRISRD------KLEKLLNALCNCNAASSEI 678
++N M + + +F E + RD K++ A C N + I
Sbjct: 382 VLNTMIKKKCEVNASTFNTIFRYIEKK--RDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 32/272 (11%)
Query: 448 LRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 503
L S+ +EI TFT LI + G + + F M+D+ C P+ + ++ SR
Sbjct: 176 LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKR 235
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
S+A+ F+ +PD Y++++ A + E V+K M
Sbjct: 236 RASEAQSFFDSLKDR--------------FEPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
L+G + + ++ ++ R G+ F +L++G P+ + F ++ +
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRT 341
Query: 624 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL----CNCNAASSEIT 679
EK + + N M + L E++ + + K+LN + C NA+ T
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAS----T 397
Query: 680 VSNLSRALHALCRSEKERDLSSSAHFGSQAID 711
+ + R + EK+RD++ + S+ ++
Sbjct: 398 FNTIFRYI------EKKRDVNGAHRMYSKMME 423
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 131/330 (39%), Gaps = 23/330 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+E +L+++N +LN + + + + +++ + G++P + TY L +E +
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 401
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E +M K A LTY V++ G + A +R M G+ A VY L
Sbjct: 402 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 461
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
GR +++ +++E+++ + P + LII +++ + M + PN
Sbjct: 462 AKEGRVEESRMILERMRE-QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 520
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T A + YS+ A F E + P+ Y++++E
Sbjct: 521 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCG-------------VLPNVGIYTALIEGHC 567
Query: 549 ----TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ F ++ L D ++ L+ SR GK H F L E G +
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQ----DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 623
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
P+ + ++ + Q N +KA L+ M
Sbjct: 624 PNAFTYNSLISGSCKQGNVDKASQLLEEMC 653
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 170/421 (40%), Gaps = 45/421 (10%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K ++ + Y+ ++ L + G I M+ + L P+ Y ++ + G
Sbjct: 407 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN-GLKPNAVVYTTLMTAHAKEG 465
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA-VLNACVPSHQWKGVFWVF 337
++E ++ERMR++ + PD+ YN+ ++ C + ++
Sbjct: 466 RVEESRMILERMREQG---------------ILPDVFCYNSLIIGFCKAKRMEEARTYLM 510
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+ L + L+P+A TYG ++ ++G+ ++ +F +M G Y L+ +E
Sbjct: 511 EMLERR-LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 569
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
G + EA + R + R V+ Y L L NG+ +A + +++ + P T
Sbjct: 570 GNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE-KGLLPNAFT 628
Query: 458 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 514
+ LI S G++D + + M P+I T N ++ + +AK LF++
Sbjct: 629 YNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE 688
Query: 515 ---------TTRANSSGYTFLSGDGAPLK-----------PDEYTYSSMLEASATAHQWE 554
T A GY A + PD + Y+ +L ++E
Sbjct: 689 GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFE 748
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEA-SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
+++ M G T L+E ++GK H + ++E IP+ + +T +
Sbjct: 749 KALDLFQEMLEKG--FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 806
Query: 614 L 614
+
Sbjct: 807 I 807
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/429 (18%), Positives = 170/429 (39%), Gaps = 42/429 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y L+ + G +A RI + M+ C + ++ ++++ + + G +++ +++++
Sbjct: 312 ITYNALIDGFMRQGDIEQAFRIKDEMVA-CGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 370
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K +EPD Y+ ++ F + +++K L P+
Sbjct: 371 EMMEKG---------------VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT 415
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + + + + G + R+M +G A+ Y L+ A +EG++ E+ +
Sbjct: 416 VLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILE 475
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M ++G++ Y L C R ++A + ++ R +P T+ I
Sbjct: 476 RMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE-RRLRPNAHTYGAFIDGYSKA 534
Query: 469 GHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFE--------ETTRA 518
G ++ F M C PN+G A+++ + + ++A +F + +
Sbjct: 535 GEMEIADRYFNEMLS-CGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593
Query: 519 NSSGYTFLSGDGA--------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 564
S LS +G L P+ +TY+S++ S + + + M
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 624
+ G D + L+ +AG+ ++ FD + G P+ + + M+ N
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713
Query: 625 KAVALINAM 633
A L+ M
Sbjct: 714 AAFQLLEEM 722
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 123/311 (39%), Gaps = 30/311 (9%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KAG A R FN ML C + P++ Y ++ + G + E + R S+R+
Sbjct: 533 KAGEMEIADRYFNEML-SCGVLPNVGIYTALIEGHCKEGNVTEAFSVF---RFILSRRVL 588
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
D+ Y+ +++ + + F +F +L++ GL P+A TY +
Sbjct: 589 Q------------DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 636
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ G D + +M G +TY +L+ + G+I A ++E RG+
Sbjct: 637 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 696
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y + C + A ++E++ LR P + ++ + + +FQ
Sbjct: 697 VTYAAMVDGYCKSKNPTAAFQLLEEML-LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQ 755
Query: 480 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
M + + + N +++ Y ++ +A L EE P+ T
Sbjct: 756 EMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ-------------FIPNHVT 802
Query: 540 YSSMLEASATA 550
Y+S+++ + A
Sbjct: 803 YTSLIDHNCKA 813
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 132/333 (39%), Gaps = 60/333 (18%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+R R A +D S+ ++ M G++ G L++G +G+
Sbjct: 514 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 573
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A SV ++ + +D+++ Y+ L+ L + G+ HEA IF+ L++ L P+ Y
Sbjct: 574 EAFSVFRFILSRRVLQDVQT---YSVLIHGLSRNGKMHEAFGIFS-ELQEKGLLPNAFTY 629
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQK---PS-----------------KRIKNMHRKNWD 307
+S+ + G + + +L+E M K P +R KN+
Sbjct: 630 NSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEG 689
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
L P+ V Y A+++ S F + +++ G+ P A Y + + + K++
Sbjct: 690 RGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEK 749
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM----------------- 410
+ F++M + G A +++ L+ + + GK+ EA + M
Sbjct: 750 ALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 808
Query: 411 ------------------EQRGVVGTASVYYEL 425
++R V+ TA Y L
Sbjct: 809 HNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSL 841
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 75/400 (18%), Positives = 147/400 (36%), Gaps = 52/400 (13%)
Query: 263 DIAAYHSVAVTLGQ---VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
D+ ++AV L G +L+K I R P + ++ + P+ V+++
Sbjct: 100 DLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDM 159
Query: 320 VLNACVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+++ S++ G VF + +PS + + +L+ K +L + F M
Sbjct: 160 LMD----SYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGM 215
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKI-----------------NEAVAAVRNMEQRGVVGT 418
TY ++ A + G + +EA+ R+M +G+V
Sbjct: 216 CAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPD 275
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y L C R ++A L++ ++ + KP IT+ LI M G I+ I
Sbjct: 276 LYTYDILINGFCMEKRSREAKLMLLEMIDV-GLKPEPITYNALIDGFMRQGDIEQAFRIK 334
Query: 479 QHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTFL-----SG 528
M E N+ N +L + KA +E+ E+ +S Y+ L G
Sbjct: 335 DEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 394
Query: 529 DGAP-------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
L P TYS ++ + + + M ++G + + +
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 454
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 615
L+ ++ G+ + + E G +P + ++I
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 494
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F+Y +L K + +AL +F MLE + +++++ + G L+E L+E
Sbjct: 732 FIYNVILNFCCKEEKFEKALDLFQEMLEKG--FASTVSFNTLIEGYCKSGKLQEANHLLE 789
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K P+ V Y ++++ + ++ ++++ + P+
Sbjct: 790 EMIEKQ---------------FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 834
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
A TY + G V F +M G +TY V++ A+ EG + EA
Sbjct: 835 AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 890
>gi|193848521|gb|ACF22711.1| PPR protein [Brachypodium distachyon]
Length = 292
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 129/288 (44%), Gaps = 19/288 (6%)
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
QK ++ MH ++PD YN +++ + F ++R+ G++P T
Sbjct: 10 QKAFAVLREMHASG----VQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVT 65
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
+ ++ + G++D E F +M +S G TY +++ E+ + + M+
Sbjct: 66 WNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMK 125
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
++G+V Y L +GR+++A+ +E +K+ KP + L+ + G
Sbjct: 126 EQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKA-DGLKPSPTMYHALVNAYAQRGLA 184
Query: 472 DDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
D +++ + M+ D E + +N+++ + + +A + + F+ +
Sbjct: 185 DHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQ-----------FMKEND 233
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
L+PD TY+++++A Q++ +Y+ M SGC D+ A L
Sbjct: 234 --LRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPDRKARAML 279
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 22/311 (7%)
Query: 199 GLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
G D+G W++A +VL ++ + D R Y ++ GK A+ FN M E+
Sbjct: 2 GFRDRGDWQKAFAVLREMHASGVQPD---RHFYNVMIDTFGKYNCLGHAMDAFNRMREE- 57
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
+ PD+ ++++ + G ++L E MR+ P YN
Sbjct: 58 GIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCP---------------PGTTTYN 102
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
++N +W GV + ++++ GL P+ TY ++V +SG++ E M
Sbjct: 103 IMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKAD 162
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G Y LV A+ + G + A+ V+ M G+ + V L + R +A
Sbjct: 163 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEA 222
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
V++ +K +P IT+T L+ + + D I++ M C P+ AML+
Sbjct: 223 FSVLQFMKE-NDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPD-RKARAMLR 280
Query: 498 VYSRNDMFSKA 508
R ++K
Sbjct: 281 SALRYMKYTKV 291
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 17/289 (5%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD VVYNA+LN + + K F +++ + + G + + A++ M + +G+ D V
Sbjct: 21 ISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSR-NVASFNTMMRGLFNNGEVDEVF 79
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M +SG + TY +LV F + G N+++ + +Q G A Y + L
Sbjct: 80 SIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGL 139
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C G+ A+ V+ + KP + LI + +D I +F+ + HC P
Sbjct: 140 CKMGKLDKAVSVLNGMIE-SGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPT 198
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
I T N ++ + + F++A +L +E G+ P TYS +++
Sbjct: 199 IVTYNTLINGLCKGERFAEAYDLVKEMLE---KGW----------NPSVITYSLLIKGLC 245
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC-HLLEHAFD 596
H+ E ++ + G + D H L+ GK H E FD
Sbjct: 246 QDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFD 294
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/327 (18%), Positives = 137/327 (41%), Gaps = 25/327 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL + G + S+ + +K+ ++ Y L+ K G +++L + +
Sbjct: 65 MMRGLFNNGEVDEVFSIWEL---MKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAK 121
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ D AY ++ L ++G L + V ++ M + K P+
Sbjct: 122 QEGGAL-DAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCK---------------PNTQ 165
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VYNA++N + + +++ VFK+L P+ TY + + + ++ ++ ++M
Sbjct: 166 VYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEM 225
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ G +TY +L++ ++ K+ A+ + +G ++ L LC+ G+
Sbjct: 226 LEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKT 285
Query: 436 QDAMLVVEKIKSLRH--SKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTV 492
+ A E + H P +T+ L+ GG + + I+ +++ P+I +
Sbjct: 286 EHAS---ELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISY 342
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRAN 519
N LK + S A + N
Sbjct: 343 NITLKGLCACNRISVAILFLNDAVTKN 369
>gi|125535459|gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indica Group]
Length = 697
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 26/243 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP----DIAAYHSVAVTLGQVGLLKELVK 285
VYT L+ AGR + + + M + P D Y +V TL G ++
Sbjct: 353 VYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARA 412
Query: 286 LIERMRQK---PSKRIKNMHRKNW------------------DPVLEPDLVVYNAVLNAC 324
++E M Q S+ N+ K + + ++PD+V YN +++ C
Sbjct: 413 VLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGC 472
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE-AIG 383
V + G +F ++R+ G+ PSA +Y M+ SG+ L H+ F +M K A+
Sbjct: 473 VLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVD 532
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+ +LV A+ G + A V M+ RGV + Y LA + R +A+L+ E
Sbjct: 533 RAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWE 592
Query: 444 KIK 446
+IK
Sbjct: 593 EIK 595
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 124/338 (36%), Gaps = 66/338 (19%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD +NA L+AC + +F Q+ P A TY + +++ ++G+ DLV
Sbjct: 201 PDTAAFNAALSACADAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVARV 260
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR------------------ 413
++ SG A T+ LV A+ G I A V+ M +R
Sbjct: 261 LHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVADDHIIS 320
Query: 414 -------------------------GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ VY L N GR +D VV ++++
Sbjct: 321 HDQQSCVLEDIVKPWEQDEVPLLPKAYPPNSRVYTTLMKGYMNAGRVED---VVAMLRAM 377
Query: 449 RH-------SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
R S+P +T+T +I + + G ++ ++ + M + + T N ++K Y
Sbjct: 378 RREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYC 437
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ KAKEL + A ++PD TY+++++ ++
Sbjct: 438 QQLQAGKAKELLA------------VDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALF 485
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
M G + L+ + +G+ L FD +
Sbjct: 486 NEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEM 523
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 18/140 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ +G+P A ++F+ M +D + D AA++ + ++GLL+ K++ERM
Sbjct: 500 YTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERM 559
Query: 291 RQKP-----------SKRIKNMHRKN-----WDPVLEP--DLVVYNAVLNACVPSHQWKG 332
+ + +K I R W+ + E D V A+ + CV + ++
Sbjct: 560 KARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDGEVVEALADVCVRAALFRK 619
Query: 333 VFWVFKQLRKSGLKPSAATY 352
+ ++ + G++P+ A Y
Sbjct: 620 ALEMVARMEEMGVEPNKAKY 639
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 160/414 (38%), Gaps = 34/414 (8%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+K IM Q G + E L+ G + G +A L+ + +K+ YT L
Sbjct: 245 YKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEA---LELFFQMKEDGCFPDVPTYTVL 301
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+A + G+ EAL+ F M+E+ + P++ Y + +VG + E ++++ M +K
Sbjct: 302 VAAFCEVGKETEALKFFEEMVEN-GIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
L +V +NA+++ + V ++ + + P++ TY
Sbjct: 361 ---------------LVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNE 405
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + D KM ++ + +TY L+ + ++ A M + G
Sbjct: 406 LICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDG 465
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 474
V + CLC G+ + A V E +K +H++ E +T LI D
Sbjct: 466 FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKE-KHAEANEFLYTALIDGYCKAEKFSDA 524
Query: 475 ISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 533
+F+ M + C PN T N +L + A L + + ++
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDA------------- 571
Query: 534 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
KP +TY+ ++E ++ M SGCQ + + + R G+
Sbjct: 572 KPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGR 625
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 151/349 (43%), Gaps = 27/349 (7%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
+F Q+++ G P TY + + + GK +FF +M ++G TY VL+ F
Sbjct: 282 LFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFC 341
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ GK++E + + M ++G+V + + L C G +DA+ V++ +K L P
Sbjct: 342 KVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMK-LNKVCPNS 400
Query: 456 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
T+ LI +D +++ M ++ PN+ T N ++ + + A L
Sbjct: 401 RTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRL--- 457
Query: 515 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 574
+ + DG PD+ T+ + ++ + E V++ + + ++
Sbjct: 458 --------HHLMIKDG--FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFL 507
Query: 575 HAWLL---VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
+ L+ +A + HLL F +L G P+ + F +L + E A++L++
Sbjct: 508 YTALIDGYCKAEKFSDAHLL---FKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVD 564
Query: 632 AMAYAPFHITERQWTELF-----ESNEDRISRDKLEKLLNALCNCNAAS 675
M T +T L ES+ DR + L++++++ C N +
Sbjct: 565 VMGKFDAKPTVHTYTILIEEILRESDFDR-ANMFLDQMISSGCQPNVVT 612
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 70/365 (19%), Positives = 150/365 (41%), Gaps = 55/365 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA-ILGKAGRPHEALRIFNLM 254
LL GL +G AMS++D V G D + + YT L+ IL ++ + + ++
Sbjct: 546 LLDGLRKEGKVEDAMSLVD-VMGKFDAK--PTVHTYTILIEEILRESDFDRANMFLDQMI 602
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
C P++ Y + + G L E +++ +++++ + D
Sbjct: 603 SSGCQ--PNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEG---------------ILLDS 645
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML-------------- 360
+Y+ ++NA Q F V ++ +G +PS TY + ++ ++
Sbjct: 646 FIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLN 705
Query: 361 ------------QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+ ++++ F KM + G TY L++ + ++ A
Sbjct: 706 STNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFN 765
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
+M++ G+ + +++ L C G ++A+ +++ + H LE ++ L+ +
Sbjct: 766 HMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLE-SYKLLVCGLFEQ 824
Query: 469 GHIDDCISIFQHMKDHCEPNIGTV--NAMLKVYSRN---DMFSKAKELFEET-TRANSSG 522
G+ + IF+ + C N V +L R D S+ +++ E+T R +S
Sbjct: 825 GNQEKAEEIFRSLLS-CGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDT 883
Query: 523 YTFLS 527
+T LS
Sbjct: 884 HTMLS 888
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 149/357 (41%), Gaps = 32/357 (8%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
AY+ + +L G + ++V L ER Q D V PD+ +N V+
Sbjct: 48 AYNKLMSSLIGRGRVHDVVALFERWIQ--------------DRVYSPDVWSFNVVIKGVC 93
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-GA 384
Q + + +++ + G P T+ + ++ + ++ + HE R++ + G +
Sbjct: 94 RVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNV 153
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
+T+ ++ + + GK+ +A+A +M G++ Y L G A+ V ++
Sbjct: 154 VTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQ 213
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 503
+ LR P +TF+ LI G +DD + I+ M H +PN+ T + ++ + +
Sbjct: 214 MTRLR-CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQN 272
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+A L E L D + P + Y+ +++ + + + KGM
Sbjct: 273 RSDEAIGLLNELN---------LRPD---IAPQAFIYNPVIDVLCKCGKVDEANLIRKGM 320
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL---FFTEMLIQA 617
GC+ D+ + L++ + F ++EAG P + F L++A
Sbjct: 321 EEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 377
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 133/315 (42%), Gaps = 22/315 (6%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y KL++ L GR H+ + +F ++D PD+ +++ V + +VG +++ ++L+E
Sbjct: 47 YAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVE 106
Query: 289 RMRQ---KPSKRIKN------------------MHRKNWDPVLEPDLVVYNAVLNACVPS 327
RM + P N + R D V P++V + +V++ +
Sbjct: 107 RMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKA 166
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + V+ + SG+ P+ TY + + + G E +++M + +T+
Sbjct: 167 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTF 226
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + G++++A+ +M Q + + + LC R +A+ ++ ++
Sbjct: 227 SSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNL 286
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
P + +I G +D+ I + M++ C P+ T ++ Y S
Sbjct: 287 RPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRIS 346
Query: 507 KAKELFEETTRANSS 521
+A F E A S
Sbjct: 347 EAIMFFHEMVEAGCS 361
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 89/230 (38%), Gaps = 32/230 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M SG+M L+ G G G A+ V + L+ D+ + ++ L+ +
Sbjct: 179 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVT---FSSLIDGYCR 235
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVKLIERMRQK 293
G+ +ALRI++ M + + P++ + + +L + +GLL EL
Sbjct: 236 CGQLDDALRIWSDMAQH-RIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL---------- 284
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
N P + P +YN V++ + + K + + G +P TY
Sbjct: 285 -----------NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYT 333
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
+ + + FF +M ++G + ++T + + G NE
Sbjct: 334 ILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 383
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 152/371 (40%), Gaps = 28/371 (7%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ + L +G+ P A + + M M++SGK F +M + G +T+ L+
Sbjct: 227 YAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSG 286
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ +N A A M + G+ Y LC GR QDAM + E++ R P
Sbjct: 287 MCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCE-RGLNP 345
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+ T LI + G + + + M + ++ NA++ + R A ++
Sbjct: 346 NTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIV 405
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
EE + DG LKPD+ TY+++++ + + + + M+ G LD
Sbjct: 406 EEMRK-----------DG--LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDD 452
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI-----VQSNYEKAV 627
+ L+ S+AG+ E ++EAG P +T M+I A V++ ++
Sbjct: 453 VTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYT-MVIDAFCKNGDVKTGFKHLK 511
Query: 628 ALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 687
+ N P +T F S + D LLNA+ N ++IT + L L
Sbjct: 512 EMQNK-GKNPGIVTYNVVMNGFCSLGQMKNAD---MLLNAMLNIGVCPNDITYNIL---L 564
Query: 688 HALCRSEKERD 698
C+ K RD
Sbjct: 565 DGHCKHGKVRD 575
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 114/263 (43%), Gaps = 26/263 (9%)
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRI 250
Q L++ + G A +V D + +R ++ V + L++ + KA + A +
Sbjct: 244 QFNMLMRDMIRSGKLASARNVFDEML----RRGVQPTVVTFNTLMSGMCKASDLNNANAL 299
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK----RIKNMHR 303
LM + + PD+ Y + L + G +++ +++ E M ++ P+ + + H
Sbjct: 300 RGLMAK-AGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHC 358
Query: 304 KNWDPV-------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K D ++ DLV YNA++N K + +++RK GLKP
Sbjct: 359 KEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKV 418
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ + G+ D E ++M+ G A+ +TY L+ + G+ +A + M
Sbjct: 419 TYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEM 478
Query: 411 EQRGVVGTASVYYELACCLCNNG 433
+ G+ + Y + C NG
Sbjct: 479 MEAGLQPDNTTYTMVIDAFCKNG 501
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 124/325 (38%), Gaps = 50/325 (15%)
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
D L PD + +A+ G + L+ R+ P +H D + P+
Sbjct: 187 DEGLLPDGCSLLLLALRRGIRVPMPAWSDLMNRLPSVPEAYAFYLHL--LDAGVPPEARQ 244
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
+N ++ + S + VF ++ + G++P+ T+ M M ++ + + MA
Sbjct: 245 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 304
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG--- 433
K+G A TY ++ + G+I +A+ M +RG+ V L C G
Sbjct: 305 KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVT 364
Query: 434 -----RWQDAMLVVE--------------KIKSLRHS------------KPLEITFTGLI 462
RW+ A V+ +++ ++ + KP ++T+T LI
Sbjct: 365 AGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLI 424
Query: 463 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G +D + + Q M D + T A++ S+ A+ + E A
Sbjct: 425 DGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAG-- 482
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEA 546
L+PD TY+ +++A
Sbjct: 483 -----------LQPDNTTYTMVIDA 496
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/211 (17%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ AY+++ +V +K ++E MR+ L+PD V Y +++
Sbjct: 381 DLVAYNALVNGFCRVRDMKAANDIVEEMRKDG---------------LKPDKVTYTTLID 425
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
C + + +++ G+ TY + + ++G+ +M ++G
Sbjct: 426 GCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQP 485
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
TY +++ AF + G + ++ M+ +G Y + C+ G+ ++A +++
Sbjct: 486 DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLL 545
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
+ ++ P +IT+ L+ G + D
Sbjct: 546 NAMLNIGVC-PNDITYNILLDGHCKHGKVRD 575
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 11/120 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L+PD Y V++A + K F K+++ G P TY + M G+
Sbjct: 483 LQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNAD 542
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ----RGVVGTASVYYEL 425
M G +TY +L+ + GK VR+ E+ +G+V VY L
Sbjct: 543 MLLNAMLNIGVCPNDITYNILLDGHCKHGK-------VRDTEELKSAKGMVSDFGVYTSL 595
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 138/339 (40%), Gaps = 28/339 (8%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQ 183
L + +++ D F K P + + +A + L++ E + + R M Q
Sbjct: 172 LGYCRTQQLEVAHDLFCK----MPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ 227
Query: 184 SGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGR 243
M+T L+KGL D G + + +L + L + ++ Y L+ + + +
Sbjct: 228 PD-MYTHA---ALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRA---YAALVDLWCREQK 280
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
EA +I N M D L P + V + G + V++ E MR K
Sbjct: 281 AEEAEKILNEMF-DSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC-------- 331
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
EP++ YNA++ + + + Q+R+ G++P TY L + G
Sbjct: 332 -------EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDG 384
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
R M +G A TY VL+ A + GK++EA + +E RG+ + +
Sbjct: 385 HIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFN 444
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
+ LC G++ A +E + S ++ P T++ I
Sbjct: 445 TVINGLCKAGKFDVACTFLENMISAGYA-PDTYTYSPFI 482
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 140/351 (39%), Gaps = 61/351 (17%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P YNA++ A + + +SG +P A T+ + ++ + ++ H+
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
F KM G + A++Y L+ F E G+I+EA+ R M Q + A+ L LC+
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAA----LVKGLCD 242
Query: 432 NGRWQDAMLVVEKIKSL-----------------RHSK-----------------PLEIT 457
GR ++ + +++K+K L R K P +T
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302
Query: 458 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
T ++ + G + + +F+ M+ CEPN+ T NA+++ + KA L ++
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362
Query: 517 RAN---------------------SSGYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWE 554
S + L +G L D+YTY+ +++A + +
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
++ G+ G + + ++ +AGK + ++++ AG P
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAP 473
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 182/468 (38%), Gaps = 64/468 (13%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
++ Y L+ L K G+ EA +F+ LE + P+ +++V L + G +
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFD-GLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFL 463
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL-NACVPSHQWKGVFWVFKQLRKSGLK 346
E NM + PD Y+ + N C +G+F++ + L+K +K
Sbjct: 464 E-----------NMISAGY----APDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKD-VK 507
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
PS Y + + + Y L + +M G + +TY VRA+ EG+++EA
Sbjct: 508 PSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENV 567
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
V M++ + A Y L + G+ A+ +++ + + S P TF
Sbjct: 568 VTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGV-ASMPNHFTF-------- 618
Query: 467 DGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE--ETTRANSSGYT 524
I + + + +H +V K D+F ELFE + SS T
Sbjct: 619 ---FILLRHLLQRRLAEHVPLKATSV---WKTIELADVF----ELFELMKKNSVPSSART 668
Query: 525 FLS---GDGAPLKPDEYT--YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+LS G + DE T S M E + + E +Y + C+L AW L
Sbjct: 669 YLSILEGFSEERRLDEVTSLVSLMKEENLPLN-----EDIYNALVNCFCKLRMYSDAWAL 723
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 639
+ C ++ H F +P+ +F+ +L + ++A + + + ++
Sbjct: 724 L-------CSMIGHGF--------LPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYN 768
Query: 640 ITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 687
E W + + + D +++ L S+ T + L+ L
Sbjct: 769 TDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 39/339 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT L+ + GKAG+ AL++F+ +M DC P+I Y ++ + GL ++ ++ E
Sbjct: 262 TYTMLINLYGKAGKSFMALKLFHEMMSHDCK--PNICTYTALVNAFAREGLCEKAEEVFE 319
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M++ LEPD+ YNA++ A + G +F ++ G +P
Sbjct: 320 QMQEAG---------------LEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPD 364
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
A+Y + ++ ++G D F+ M + G ++ VL+ A+ + G +N+ +
Sbjct: 365 RASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILN 424
Query: 409 NMEQRGVVGTASVY---YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
M + G+ V L L G+ ++ + V+EK + T+ LI
Sbjct: 425 QMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADIS----TYNILINRY 480
Query: 466 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
G I+ +FQ + +P++ T + + YS+ ++ K E+FEE
Sbjct: 481 GQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEE---------- 530
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+ DG PD T +L A + Q E V + M
Sbjct: 531 -MIDDGC--YPDGGTAKVLLAACSNEDQTEQVTTVIRTM 566
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 156/410 (38%), Gaps = 54/410 (13%)
Query: 309 VLEPDLVVYNAVLNACVP---SHQWKGVFWVFK-QLRKSGLKPSAATYGLAMEVMLQSGK 364
+L P L ++ + V QW + + + L +S KP Y L +E Q
Sbjct: 111 MLPPTLDAWDDIFTVAVQLRMRKQWDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLL 170
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
Y + ++ ++ TY +L++A+ G + +A A M G+ +A VY
Sbjct: 171 YKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNA 230
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
L G A + +++K KP T+T LI G + +F M H
Sbjct: 231 YINGLMKGGNSDKAEEIFKRMKK-DACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSH 289
Query: 485 -CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
C+PNI T A++ ++R + KA+E+FE+ A L+PD Y Y+++
Sbjct: 290 DCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAG-------------LEPDVYAYNAL 336
Query: 544 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 603
+EA + A ++ M GC+ D+ + L+ +AG E F + G
Sbjct: 337 MEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGI 396
Query: 604 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK 663
P M ++ S Y K ++ +K E+
Sbjct: 397 TP------TMKSHMVLLSAYSKMGSV-----------------------------NKCEE 421
Query: 664 LLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDIS 713
+LN +C ++++ L + K ++ GS DIS
Sbjct: 422 ILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADIS 471
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 120/316 (37%), Gaps = 62/316 (19%)
Query: 303 RKNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RK WD ++ +PD++ YN ++ A +K + QL ++ P+
Sbjct: 132 RKQWDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTED 191
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY L ++ SG + F +M G A+ Y + + G ++A + M
Sbjct: 192 TYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRM 251
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
++ AC KP T+T LI G
Sbjct: 252 KKD------------AC------------------------KPTTETYTMLINLYGKAGK 275
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+ +F M H C+PNI T A++ ++R + KA+E+FE+ A
Sbjct: 276 SFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAG---------- 325
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 589
L+PD Y Y++++EA + A ++ M GC+ D+ + L+ +AG
Sbjct: 326 ---LEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQD 382
Query: 590 LLEHAFDSLLEAGEIP 605
E F + G P
Sbjct: 383 DAEAVFKDMKRVGITP 398
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 118/298 (39%), Gaps = 15/298 (5%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
VVYNA +N + +FK+++K KP+ TY + + + ++GK + + F +
Sbjct: 226 VVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHE 285
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M TY LV AF EG +A M++ G+ Y L G
Sbjct: 286 MMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGY 345
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 493
A + ++ + +P ++ L+ + G DD ++F+ MK P + +
Sbjct: 346 PYGAAEIFSLMQHM-GCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHM 404
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+L YS+ +K +E+ + ++ LK D Y +SML Q+
Sbjct: 405 VLLSAYSKMGSVNKCEEILNQMCKSG-------------LKLDTYVLNSMLNLYGRLGQF 451
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
E V + M D + + L+ +AG +E F L G P + +T
Sbjct: 452 GKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWT 509
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 99/281 (35%), Gaps = 63/281 (22%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ +AG P+ A IF+LM + PD A+Y+ + G+ G
Sbjct: 331 YAYNALMEAYSRAGYPYGAAEIFSLM-QHMGCEPDRASYNILVDAYGKAGF--------- 380
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV-----LNACVPSHQWKGVFWVFKQLRKS 343
+ K+M R P ++ +V+ +A +N C + Q+ KS
Sbjct: 381 --QDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEE---------ILNQMCKS 429
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
GLK + + + G++ + E R M K TY +L+ + + G I
Sbjct: 430 GLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERM 489
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ + +G+ KP +T+T I
Sbjct: 490 EDLFQLLPSKGL------------------------------------KPDVVTWTSRIG 513
Query: 464 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRND 503
+ C+ IF+ M D C P+ GT +L S D
Sbjct: 514 AYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAACSNED 554
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 167/400 (41%), Gaps = 47/400 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R A+ +L + G D+ +Y ++ L K +A ++++ M+
Sbjct: 170 LINGLCKIGETRAALQMLKKIEGKLVNTDV---VMYNIIINSLCKDKAVSDAYQLYSEMI 226
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS----------------- 295
+ PD+ ++S+ + VG LKE L M K P
Sbjct: 227 TK-RISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNI 285
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
R KNM + PD+V Y+++++ ++ VF + + G+ P A +Y +
Sbjct: 286 TRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIM 345
Query: 356 MEVMLQSGKYDLVHE---FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ + GK +V E F++M G A +TY L+ + G+I+ A V M
Sbjct: 346 INGL---GKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHN 402
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
G+ Y L LC N A+ +V+KIK + +P T+ LI GG +
Sbjct: 403 NGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKD-QGIQPSMYTYNILIDGLCKGGRLK 461
Query: 473 DCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ +FQ + K + N T N M+ + +F++A+ L + + +G
Sbjct: 462 NAQDVFQDLLIKGY-SVNAWTYNIMINGLCKEGLFNEAEVLLSK-----------MENNG 509
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
+ PD TY +++ A + E E + + M + G L
Sbjct: 510 --IIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLLL 547
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/345 (17%), Positives = 136/345 (39%), Gaps = 26/345 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P +V +N ++N + F +F ++ K G P+ T+ + + +GK
Sbjct: 90 ITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEAL 149
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F + G + ++Y+ L+ + G+ A+ ++ +E + V +Y + L
Sbjct: 150 HFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSL 209
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 488
C + DA + ++ + R S P +TF LI+ G + + +F M + P+
Sbjct: 210 CKDKAVSDAYQLYSEMITKRIS-PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTR----------------------ANSSGYTFL 526
+ T + ++ ++ ++AK + + N + + F
Sbjct: 269 VYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFS 328
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+ + P ++Y+ M+ + ++K M G D + L+ + G
Sbjct: 329 TMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLG 388
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALI 630
+ D + G IP + LI + ++++ +KA+AL+
Sbjct: 389 RISYAWQLVDEMHNNG-IPADILTYNSLIDVLCKNHHIDKAIALV 432
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/411 (18%), Positives = 164/411 (39%), Gaps = 39/411 (9%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-- 290
+++ +L ++GR +AL++F+ M PD + + LL L+ +
Sbjct: 149 QIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 208
Query: 291 -------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
R + + R D V PD+ +N V+ Q +
Sbjct: 209 FGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQ 268
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-GALTYKVL 390
+ +++ + G P T+ + ++ + ++ + HE R++ + G + +T+ +
Sbjct: 269 KALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSV 328
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ + + GK+ +A+A +M G++ Y L G A+ V +++ LR
Sbjct: 329 ISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR- 387
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
P +TF+ LI G +DD + I+ M H +PN+ T + ++ + + +A
Sbjct: 388 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 447
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
L E L D + P + Y+ +++ + + + KGM GC+
Sbjct: 448 GLLNELN---------LRPD---IAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCR 495
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL---FFTEMLIQA 617
D+ + L++ + F ++EAG P + F L++A
Sbjct: 496 PDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 546
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 133/315 (42%), Gaps = 22/315 (6%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y KL++ L GR H+ + +F ++D PD+ +++ V + +VG +++ ++L+E
Sbjct: 216 YAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVE 275
Query: 289 RMRQ---KPSKRIKN------------------MHRKNWDPVLEPDLVVYNAVLNACVPS 327
RM + P N + R D V P++V + +V++ +
Sbjct: 276 RMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKA 335
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + V+ + SG+ P+ TY + + + G E +++M + +T+
Sbjct: 336 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTF 395
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + G++++A+ +M Q + + + LC R +A+ ++ ++
Sbjct: 396 SSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNL 455
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
P + +I G +D+ I + M++ C P+ T ++ Y S
Sbjct: 456 RPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRIS 515
Query: 507 KAKELFEETTRANSS 521
+A F E A S
Sbjct: 516 EAIMFFHEMVEAGCS 530
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 89/230 (38%), Gaps = 32/230 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M SG+M L+ G G G A+ V + L+ D+ + ++ L+ +
Sbjct: 348 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVT---FSSLIDGYCR 404
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVKLIERMRQK 293
G+ +ALRI++ M + + P++ + + +L + +GLL EL
Sbjct: 405 CGQLDDALRIWSDMAQH-RIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL---------- 453
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
N P + P +YN V++ + + K + + G +P TY
Sbjct: 454 -----------NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYT 502
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
+ + + FF +M ++G + ++T + + G NE
Sbjct: 503 ILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 552
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 109/567 (19%), Positives = 219/567 (38%), Gaps = 67/567 (11%)
Query: 137 DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKL 196
DY + E ++ +++ + + + T W R M+ G+ G L
Sbjct: 931 DYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNIL 990
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+ GL +G+ ++A ++L +++ + + Y LL K GR A+ + + M+
Sbjct: 991 INGLCVEGNLKKAGNLLKQ---MEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMIC 1047
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------------ 301
+ D+ Y+ L + L+++MR++ P++ N
Sbjct: 1048 K-GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 1106
Query: 302 -------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+D L P+ V YNA++ ++ + + +GL+ + TYG
Sbjct: 1107 VAAQVFNEMSKFD--LSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 1164
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+ + + K++L +M + +G + Y VL+ + G ++EAV V NM + G
Sbjct: 1165 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDD 473
V Y L C G + A ++ ++ R L +I ++ LI + G++ +
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRM--YRSGLVLNKIIYSTLIYNFCQHGNVTE 1282
Query: 474 CISIFQ------HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA----NSSGY 523
+ ++ H DH T N ++ R+ +A++ +R NS Y
Sbjct: 1283 AMKVYAVMNCNGHGADH-----FTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 1337
Query: 524 -TFLSGDGA---PLK--------------PDEYTYSSMLEASATAHQW-EYFEYVYKGMA 564
++G G+ PL P +TY S+L+ E +++ +
Sbjct: 1338 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 1397
Query: 565 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 624
+ G +D + LL E ++G H FD +++ +P ++ +L +
Sbjct: 1398 IPG-AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAV 1456
Query: 625 KAVALI-NAMAYAPFHITERQWTELFE 650
AV L AM +T L +
Sbjct: 1457 TAVCLFGTAMGRGTLFPNHVMYTCLVD 1483
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/491 (19%), Positives = 189/491 (38%), Gaps = 74/491 (15%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E+ P I Y+++ + G K ++LI+ M K +E D+
Sbjct: 1010 MEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG---------------IEADV 1054
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
YN ++ +H+ + + K++RK + P+ TY + ++ GK + + F +
Sbjct: 1055 CTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNE 1114
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M+K + +TY L+ G EA+ + +ME G+ Y L LC + +
Sbjct: 1115 MSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEK 1174
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
++ A ++E+++ + I +T LI G +D+ + + +M KD P++ T +
Sbjct: 1175 FELAKRLLERMR-VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYS 1233
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
+++ + R AKE+ R+ L ++ YS+++
Sbjct: 1234 SLINGFCRVGNIKSAKEIICRMYRSG-------------LVLNKIIYSTLIYNFCQHGNV 1280
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK--------CHLLEHA----------- 594
VY M +G D L+ R GK CH+
Sbjct: 1281 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 1340
Query: 595 ----------------FDSLLEAGEIPHPLFFT-EMLIQAIVQ-SNYEKAVALINAMAYA 636
FD +++ G+ HP FFT L++ + + N +A +N + Y
Sbjct: 1341 INGYGSIGDPLNAFSFFDDMIKCGQ--HPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYI 1398
Query: 637 PFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKE 696
P + + L + + L + + N T S+L L LCR K
Sbjct: 1399 PGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL---LTGLCR--KG 1453
Query: 697 RDLSSSAHFGS 707
+ +++ FG+
Sbjct: 1454 KAVTAVCLFGT 1464
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 186/482 (38%), Gaps = 41/482 (8%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
A VL+D L + M + + V M + G+ L+ G G+ + A ++ +
Sbjct: 1196 AYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRM 1255
Query: 217 Y--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-PDIAAYHSVAVT 273
Y GL + ++ +Y+ L+ + G EA++++ +M +CN + D + + +
Sbjct: 1256 YRSGL-----VLNKIIYSTLIYNFCQHGNVTEAMKVYAVM--NCNGHGADHFTCNVLVSS 1308
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + G L E K + M RI L P+ + Y+ ++N
Sbjct: 1309 LCRDGKLGEAEKFLCHM-----SRIG----------LVPNSITYDCIINGYGSIGDPLNA 1353
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
F F + K G PS TYG ++ + + G +F ++ A+ ++ Y L+
Sbjct: 1354 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 1413
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+ G ++EAVA M Q V+ + Y L LC G+ A+ + P
Sbjct: 1414 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 1473
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 511
+ +T L+ GH F+ M K C P+ NA++ SR KA +
Sbjct: 1474 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC-PDTVAFNAIIDSCSRRGQMMKANDF 1532
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
F T R + P+ TY+ +L + + +Y M G D
Sbjct: 1533 F-STMRW------------WGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPD 1579
Query: 572 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 631
+ L++ S++G L ++ G + F ++ + KA L+N
Sbjct: 1580 KLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVN 1639
Query: 632 AM 633
M
Sbjct: 1640 FM 1641
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 109/284 (38%), Gaps = 63/284 (22%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
FT G LLKGL G+ +A L+ ++ + D +Y LLA K+G HEA
Sbjct: 1370 FTYGS---LLKGLCKGGNLVEAKKFLNRLHYIPGAVD---SVMYNTLLAETCKSGNLHEA 1423
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL----IERMRQKPSKRI----- 298
+ +F+ M+++ N+ PD Y S+ L + G V L + R P+ +
Sbjct: 1424 VALFDKMVQN-NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLV 1482
Query: 299 ----KNMHRKNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
K H K E PD V +NA++++C Q F +R G+
Sbjct: 1483 DGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVC 1542
Query: 347 PSAATYGLAME----------------VMLQSGKY-------------------DLVHEF 371
P+ ATY + + M++ G + DL +
Sbjct: 1543 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 1602
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
KM G T+ +L+ + E GK+ +A V M GV
Sbjct: 1603 LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGV 1646
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 126/293 (43%), Gaps = 33/293 (11%)
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-------RQKPSKRIKN 300
L +++ M+ + ++PD +HS+ + L + G+ VKL+ +M Q + N
Sbjct: 1565 LSLYSTMMRE-GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILIN 1623
Query: 301 MH------RKNWDPV-------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ RK +D V + PD YN + N ++ V ++ ++G+ P
Sbjct: 1624 KYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIP 1683
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV----LVRAFWEEGKINEA 403
A Y + M + G D+ F K+ EA+G +++V +VR GK +A
Sbjct: 1684 KHAQYITLINGMCRVG--DIQGAF--KLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 1739
Query: 404 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 463
+ + +M + ++ T + + L C + + +A L ++ + L K + + LI+
Sbjct: 1740 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEA-LKLKGVMELCGLKLDVVAYNVLIM 1798
Query: 464 SSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G +++ M +D C PNI T ++ S + + ++L +
Sbjct: 1799 GMCANGDSAAAFELYEEMRHRDLC-PNITTYAVLVDAISAANNLIQGEKLLTD 1850
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 140/328 (42%), Gaps = 23/328 (7%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
EPD+V YNAVL + +W V + ++ + G P+ AT+ + + ++G ++ VHE
Sbjct: 210 EPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHE 269
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
+M + G Y ++ ++G A + M G+ Y + LC
Sbjct: 270 ALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLC 329
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
+ RW++A ++ ++ + PL ++TF L+ G +D I + + M +H C P+
Sbjct: 330 SAERWEEAEDLLAEM--FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 387
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T ++ + + + +A L + + KP+ +Y+ +L+
Sbjct: 388 VITYTTVINGFCKEGLVDEAVMLLKNMSACGC-------------KPNTISYTIVLKGLC 434
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIP 605
A +W + + M GC + L+ + G L+E A + L L G P
Sbjct: 435 RAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKG---LVEQAIELLKQMLVNGCSP 491
Query: 606 HPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ ++ ++ E+A+ L+N M
Sbjct: 492 DLISYSTVIDGLGKAGKTEEALELLNVM 519
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 155/367 (42%), Gaps = 56/367 (15%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRI---------KNMHRKNWDPV 309
P++A ++++ L + GL +++ + + +M + P R+ K+ H + + +
Sbjct: 246 PNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 305
Query: 310 L--------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQ 361
L +P++V YN VL + +W+ + ++ + T+ + ++ Q
Sbjct: 306 LSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 365
Query: 362 SGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+G D V E +M + G +TY ++ F +EG ++EAV ++NM G
Sbjct: 366 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 425
Query: 422 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 481
Y + LC RW DA ++ + + P +TF LI G ++ I + + M
Sbjct: 426 YTIVLKGLCRAERWVDAQELISHMIQ-QGCLPNPVTFNTLINFMCKKGLVEQAIELLKQM 484
Query: 482 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE--------ETTRANSSGYTFLSGDG-- 530
+ C P++ + + ++ + +A EL T SS + LS +G
Sbjct: 485 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRT 544
Query: 531 ------------APLKPDEYTYSSMLEASATAHQWE------YFEYVYKGMALSGCQLDQ 572
A ++ D Y++++ S+ +WE +F Y M +GC ++
Sbjct: 545 DKIIQMFDSIQDATVRSDAALYNAVI--SSLCKRWETDRAIDFFAY----MVSNGCMPNE 598
Query: 573 TKHAWLL 579
+ + L+
Sbjct: 599 STYTILI 605
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 118/312 (37%), Gaps = 65/312 (20%)
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
A TY +VR+ G I +A+ + M RG T + + + C G ++ A+ ++
Sbjct: 108 AYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQ 167
Query: 444 KIKSLRHSK--PLEITFTGLIISSM-DGGHIDDCISIFQHMKDH---------------- 484
+ H+K L+ L++S++ + G +D+ + + + +
Sbjct: 168 VL----HAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223
Query: 485 --------------------CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG-- 522
C PN+ T N ++ RN +F + E + +
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283
Query: 523 ---YTFLSG---DG-----------AP---LKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
T + G DG P LKP+ Y+++L+ +A +WE E +
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
M C LD L+ + G + + +LE G IP + +T ++ +
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403
Query: 623 YEKAVALINAMA 634
++AV L+ M+
Sbjct: 404 VDEAVMLLKNMS 415
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M Q G + L+ + KG QA+ +L + DL S Y+ ++ LGK
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLIS---YSTVIDGLGK 505
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG+ EAL + N+M+ + P+ Y S+A L + G +++++ + ++
Sbjct: 506 AGKTEEALELLNVMINK-GITPNTIIYSSMASALSREGRTDKIIQMFDSIQ--------- 555
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLA 355
D + D +YNAV+++ + F + +G P+ +TY GLA
Sbjct: 556 ------DATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLA 609
Query: 356 MEVMLQSGKYDLVHEFFRKMA 376
E +++ + DL+ E + A
Sbjct: 610 SEGLVREAQ-DLLSELCSRRA 629
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 87/235 (37%), Gaps = 20/235 (8%)
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
R + +G+A G + Y ++ + G++ A + V A Y+ + LC
Sbjct: 65 RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCAR 121
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ--HMKDHCEPNIG 490
G DA+ V++++ LR ++ ++ GG + Q H K C + G
Sbjct: 122 GLIADALTVLDEMP-LRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG-CTLDSG 179
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
N ++ + EL + L G +PD +Y+++L+ A
Sbjct: 180 NCNLVVSAICEQGCVDEGVELLRK-----------LPSFGC--EPDIVSYNAVLKGLCMA 226
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
+W+ E + M GC + L+ R G + A + E G P
Sbjct: 227 KRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 173/428 (40%), Gaps = 42/428 (9%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAI----LGKAGRPHEALRIFNLM-LEDCNLYPDIAAY 267
LD + L+D F + + I L K+ + EA IF M + C PD +
Sbjct: 393 LDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCT--PDEITF 450
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKR--------IKNM---------HRKNWDPV- 309
S+ LG+VG + + K+ E+M + IKN H+ D V
Sbjct: 451 CSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVN 510
Query: 310 --LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
PDL + N ++ + + + +F++++ P A +Y + + ++++G +
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANE 570
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
+E F M + G + Y +++ F + GK+N+A + M+ +G T Y +
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCE 486
L R +A ++ E+ KS R + + ++ LI G ID+ I + M+
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNV-VIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
PN+ T N++L D KA+E+ N + F S P++ TY ++
Sbjct: 690 PNVYTWNSLL------DALVKAEEI-------NEALVCFQSMKELKCTPNQVTYGILING 736
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 606
++ ++ M G + + ++ ++AG FD G +P
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 607 PLFFTEML 614
+ M+
Sbjct: 797 SACYNAMI 804
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 140/350 (40%), Gaps = 32/350 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L +F M ++ P + + ++ + G + + L++ M
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQM-QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L+ D+V+YN +++ + + F ++ +GLKP
Sbjct: 230 KSSS---------------LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY + V+ ++ + D E F + K+ Y ++ + GK +EA + +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+G + + Y + CL G+ +A+ V E++K + + P T+ LI G
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK--KDAAPNLSTYNILIDMLCRAGK 392
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 529
+D + M K PN+ TVN M+ ++ +A +FE+ D
Sbjct: 393 LDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQM-------------D 439
Query: 530 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
PDE T+ S+++ + + +Y+ M S C+ + + L+
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLI 489
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/446 (19%), Positives = 182/446 (40%), Gaps = 59/446 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A S+L+ + K + S Y +L L K G+ EALR+F M
Sbjct: 314 MIMGYGSAGKFDEAYSLLER---QRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK 370
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P+++ Y+ + L + G L +L + M++ L P++
Sbjct: 371 KDAA--PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAG---------------LFPNVR 413
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ S + +F+Q+ P T+ ++ + + G+ D ++ + KM
Sbjct: 414 TVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKM 473
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
S ++ Y L++ F+ G+ + ++M + + C+ G
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+ + E+IKS R P +++ LI + G ++ +F MK+ C + N
Sbjct: 534 EKGRAMFEEIKS-RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
++ + + +KA +L EE + G+ +P TY S+++ A
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEM---KTKGF----------EPTVVTYGSVIDGLA------ 633
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEIPHPLFF 610
++D+ A++L E +++ + L + SL++ G I
Sbjct: 634 --------------KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 611 TEMLIQAIVQSNYEKAVALINAMAYA 636
E L+Q + N +L++A+ A
Sbjct: 680 LEELMQKGLTPNVYTWNSLLDALVKA 705
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 131/301 (43%), Gaps = 20/301 (6%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQV 277
+K +R + Y+ L+ L KAG +E +F M E C L D AY+ V +
Sbjct: 543 IKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL--DTRAYNIVIDGFCKC 600
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + + +L+E M+ K EP +V Y +V++ + + +F
Sbjct: 601 GKVNKAYQLLEEMKTKG---------------FEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
++ + ++ + Y ++ + G+ D + ++ + G T+ L+ A +
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKA 705
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
+INEA+ ++M++ Y L LC ++ A + ++++ + KP I+
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK-QGMKPSTIS 764
Query: 458 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+T +I G+I + ++F K + P+ NAM++ S + A LFEET
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Query: 517 R 517
R
Sbjct: 825 R 825
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 137/327 (41%), Gaps = 24/327 (7%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+R+ +A + +L+ L + + ++ M + G + ++ G G +
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A +L+ +K K + Y ++ L K R EA +F + + ++ Y
Sbjct: 606 AYQLLEE---MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE-EAKSKRIELNVVIYS 661
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S+ G+VG + E ++E + QK L P++ +N++L+A V +
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKG---------------LTPNVYTWNSLLDALVKAE 706
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ F+ +++ P+ TYG+ + + + K++ F+++M K G ++Y
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
++ + G I EA A + G V ++ Y + L N R DA + E+ +
Sbjct: 767 TMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR-- 824
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCI 475
+ L I ++ +D H +DC+
Sbjct: 825 --RRGLHIHNKTCVV-LLDTLHKNDCL 848
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 148/370 (40%), Gaps = 28/370 (7%)
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+CV +++ + F V + +RK +P+ + Y + D++ F++M + G
Sbjct: 142 SCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEP 201
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+ L+R F +EG+++ A++ + M+ + +Y G+ A
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF 261
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
+I++ KP E+T+T +I +D+ + +F+H+ K+ P N M+ Y
Sbjct: 262 HEIEA-NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
F +A L E RA S P Y+ +L + + V++
Sbjct: 321 AGKFDEAYSLLER-QRAKGS------------IPSVIAYNCILTCLRKMGKVDEALRVFE 367
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAI 618
M + + + L+ RAGK L+ AF DS+ +AG P+ M+ +
Sbjct: 368 EMKKDAAP-NLSTYNILIDMLCRAGK---LDCAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 619 VQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR-----DKLEKLLNALCNCNA 673
++A A+ M Y E + L + ++ R EK+L++ C N+
Sbjct: 424 KSQKLDEACAIFEQMDYKVCTPDEITFCSLIDG-LGKVGRVDDAYKIYEKMLDSDCRTNS 482
Query: 674 ASSEITVSNL 683
+ N
Sbjct: 483 IVYTSLIKNF 492
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 99/261 (37%), Gaps = 30/261 (11%)
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
R++ L +Y + VM + +D + + +M+ +G T +V + + K+
Sbjct: 90 RRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKL 149
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 460
E V+NM + S Y L + + ++++ L + +P FT
Sbjct: 150 REGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY-EPTVHLFTT 208
Query: 461 LIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
LI G +D +S+ MK + +I N + + + A + F E AN
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE-IEAN 267
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW----EYFE-----------YVYKGMA 564
LKPDE TY+SM+ A++ E FE Y Y M
Sbjct: 268 G------------LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 565 LSGCQLDQTKHAWLLVEASRA 585
+ + A+ L+E RA
Sbjct: 316 MGYGSAGKFDEAYSLLERQRA 336
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 161/390 (41%), Gaps = 18/390 (4%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++ D VVYN +LN V + K + V+ ++ G+KP T+ M+ + ++ +
Sbjct: 50 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 109
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M+ G A T+ L++ F EEG I A+ M + G T L
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C GR +DA+ +++ + +P +IT+ + H+ + + M ++ +P+
Sbjct: 170 CKLGRVEDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T N ++ +N +AK + + D L PD T+++++ A
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMV------------DRGCL-PDITTFNTLIAALC 275
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
T ++ E + + + + G D L+ + G HL F+ + +G P +
Sbjct: 276 TGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 335
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
+ ++ KA+ L+ M + + + + ++ ++ E++ + +
Sbjct: 336 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM 395
Query: 669 CNCNAASSEITVSNLSRALHALCRSEKERD 698
+ + IT + L + LC+ +K D
Sbjct: 396 DLQGISRNAITFNTL---IDGLCKDKKIDD 422
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 141/382 (36%), Gaps = 64/382 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ L K G+ EA I N M+ D PDI ++++ L L+E + L
Sbjct: 230 FTYNIVVNCLCKNGQLEEAKGILNQMV-DRGCLPDITTFNTLIAALCTGNRLEEALDL-- 286
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RQ K + PD+ +N ++NA +F++++ SG P
Sbjct: 287 -ARQVTVKGVS------------PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 333
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY ++ + GK + + M +G +TY ++ ++ +I EA
Sbjct: 334 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 393
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M+ +G+ A + L LC + + DA ++
Sbjct: 394 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN------------------------- 428
Query: 469 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
Q + + +PN T N++L Y + KA ++ E T ++G+
Sbjct: 429 ----------QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT---ANGF----- 470
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+ D TY +++ A + + V +GM + G + + +L R
Sbjct: 471 -----EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 525
Query: 589 HLLEHAFDSLLEAGEIPHPLFF 610
F + E GE P L +
Sbjct: 526 RDALSLFREMAEVGEPPDALTY 547
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 136/348 (39%), Gaps = 24/348 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
EPD + YN +N + V + + G P TY + + + ++G+ +
Sbjct: 190 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 249
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+M G T+ L+ A ++ EA+ R + +GV + L L
Sbjct: 250 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 309
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
C G A+ + E++K+ P E+T+ LI + G + + + + M+ C +
Sbjct: 310 CKVGDPHLALRLFEEMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTFLSG-------DGA----- 531
T N ++ + +A+E+F++ +R + T + G D A
Sbjct: 369 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 428
Query: 532 -----PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
L+P+ TY+S+L + + + M +G ++D + L+ +AG
Sbjct: 429 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 488
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ + + G P P + +L ++N A++L MA
Sbjct: 489 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 536
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 33/260 (12%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLK------------DKRDL----KSRFVYTKL 234
G+ L LLK + G R ++ + GL D+ DL ++ + L
Sbjct: 351 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 410
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K + +A + N M+ + L P+ Y+S+ + G +K+ ++E M
Sbjct: 411 IDGLCKDKKIDDAFELINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
E D+V Y ++N + + + V + +R G++P+ Y
Sbjct: 470 ---------------FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 514
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE-EGKINEAVAAVRNMEQR 413
++ + + FR+MA+ GE ALTYK++ R G I EA + M +
Sbjct: 515 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 574
Query: 414 GVVGTASVYYELACCLCNNG 433
G + S + LA L N G
Sbjct: 575 GFIPEFSSFRMLAEGLLNLG 594
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 108/278 (38%), Gaps = 27/278 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH ALR+F M ++ PD Y+++ L +G L + + L++
Sbjct: 300 YTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 358
Query: 289 RMRQKPSKR------------IKNMHRKNWDPVLEP-DL-------VVYNAVLNACVPSH 328
M R K M + + V + DL + +N +++
Sbjct: 359 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 418
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ F + Q+ GL+P+ TY + + G + M +G + +TY
Sbjct: 419 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 478
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ + G+ A+ +R M +G+ T Y + L +DA+ + ++ +
Sbjct: 479 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 538
Query: 449 RH---SKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
+ +I F GL GG I + M D
Sbjct: 539 GEPPDALTYKIVFRGL---CRGGGPIKEAFDFMLEMVD 573
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 147/369 (39%), Gaps = 24/369 (6%)
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
+ ++ SG P+ T+ + M + + GK F ++ K+G A+++ L+ + +
Sbjct: 220 YLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCK 279
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G + E ME+ V Y L LC + +DA + +++ R P ++
Sbjct: 280 SGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCD-RGLVPNDV 338
Query: 457 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
TFT LI G +D + I+Q M + ++ N ++ + F +A++ E
Sbjct: 339 TFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEM 398
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
T+ L PD++TY+++L+ S E + K M G QLD
Sbjct: 399 TKRG-------------LIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAF 445
Query: 576 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM-- 633
++ R GK E +L AG P +T ++ + + + L+ M
Sbjct: 446 TAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQS 505
Query: 634 -AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 692
+ P IT + L + + LLNA+ N +IT + L L C+
Sbjct: 506 DGHIPGVIT---YNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNIL---LQGHCK 559
Query: 693 SEKERDLSS 701
K D +
Sbjct: 560 HGKLGDFQN 568
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 21/237 (8%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + + +T L+ K GR AL I+ M L D+ Y+++ L + G
Sbjct: 330 DRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTK-GLKADLVLYNTLIDGLCKGGYF 388
Query: 281 KELVKLIERMRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAV 320
+E K + M ++ P K M ++ ++ D V + A+
Sbjct: 389 REARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAI 448
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
++ + +++ ++GLKP TY + M+ + G + + ++M G
Sbjct: 449 ISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGH 508
Query: 381 AIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
G +TY VL+ ++G++ A + M GVV Y L C +G+ D
Sbjct: 509 IPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGD 565
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 116/279 (41%), Gaps = 19/279 (6%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ Y+A+++ Q + +FK++ GL P+ T+ + ++G+ DL E
Sbjct: 300 PDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEI 359
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+++M G + Y L+ + G EA V M +RG++ Y L C
Sbjct: 360 YQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCK 419
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSM--DGGHIDDCISIFQHMKDHCEPN 488
G + A+ + +++ ++ L+ + FT IIS + DG +D ++ + ++ +P+
Sbjct: 420 EGDLELALEMRKEM--VKEGIQLDNVAFTA-IISGLCRDGKIVDAERTLREMLRAGLKPD 476
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
GT ++ + + +L +E S G+ P TY+ ++
Sbjct: 477 DGTYTMVMDGFCKKGDVKMGFKLLKE---MQSDGHI----------PGVITYNVLMNGLC 523
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
Q + + + M G D + LL + GK
Sbjct: 524 KQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGK 562
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 123/288 (42%), Gaps = 27/288 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ L +G + A + D + K L+ V + L+ K+G E R+ ++
Sbjct: 238 LMNRLCKEGKVKDAQLIFDEI----RKTGLQPTAVSFNTLINGYCKSGNLEEGFRL-KMV 292
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIKN-- 300
+E+ ++PD+ Y ++ L + L++ L + M + + + KN
Sbjct: 293 MEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGR 352
Query: 301 ------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
++++ + L+ DLV+YN +++ ++ ++ K GL P TY
Sbjct: 353 VDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTT 412
Query: 355 AMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
++ + G +L E ++M K G + + + ++ +GKI +A +R M + G
Sbjct: 413 LLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAG 472
Query: 415 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
+ Y + C G + ++++++S H P IT+ L+
Sbjct: 473 LKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHI-PGVITYNVLM 519
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 145/348 (41%), Gaps = 46/348 (13%)
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
F L L D + P+ ++ + ++G L K+ + MR+ +
Sbjct: 173 FYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS----------------V 216
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P +V +N +++ + V ++K++ G+KP TYG ++ ++G+ + +
Sbjct: 217 QPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVK 276
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F +M +G A+ + L+ A +EG +N + ++M RGV+ Y L LC
Sbjct: 277 MFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLC 336
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 489
+ A +VE++K+ KP ++T+T LI G +D + I Q M + +
Sbjct: 337 RARNLKAAESIVEEMKN-AGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDE 395
Query: 490 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 549
T A++ S+ A+ + E A L+PD TY+ +++A
Sbjct: 396 VTYTALISGLSKAGRPVDAERVLREMMEAA-------------LEPDNTTYTMVIDAFCR 442
Query: 550 AHQWEYFEYVYKGMALSG---------------CQLDQTKHAWLLVEA 582
+ + K M G C+L Q K+A +L+ A
Sbjct: 443 KGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHA 490
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 135/304 (44%), Gaps = 22/304 (7%)
Query: 213 LDWVYGL-KDKRDLKSR---FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
LD V GL K+ D+ + + Y L+ + GR A+++FN M D + P+ +
Sbjct: 236 LDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEM-RDTGVNPNAVVFT 294
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ + G + + L + MR + + PDLV YNA++N +
Sbjct: 295 TLIDAHCKEGNVNAGMDLYQDMRVRG---------------VMPDLVAYNALVNGLCRAR 339
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
K + ++++ +GLKP TY ++ + GK D+ + +KMA+ ++ +TY
Sbjct: 340 NLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYT 399
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ + G+ +A +R M + + + Y + C G + +++++++
Sbjct: 400 ALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQN- 458
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSK 507
+ KP +T+ ++ G + + + M + P+ T N +L ++ +
Sbjct: 459 KGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVAN 518
Query: 508 AKEL 511
++EL
Sbjct: 519 SEEL 522
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 123/316 (38%), Gaps = 52/316 (16%)
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
D + P+ ++N ++ V + VF ++R+S ++P+ T+ + M ++
Sbjct: 178 LDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS-VQPTVVTFNTLISGMCRARDL 236
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
D V +++M+ G TY L++ F G++ AV M GV
Sbjct: 237 DAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGV---------- 286
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 484
P + FT LI + G+++ + ++Q M+
Sbjct: 287 --------------------------NPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRG 320
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
P++ NA++ R A+ + EE A LKPD+ TY++++
Sbjct: 321 VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG-------------LKPDKVTYTTLI 367
Query: 545 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ + + + + MA LD+ + L+ S+AG+ E ++EA
Sbjct: 368 DGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALE 427
Query: 605 PHPLFFTEMLIQAIVQ 620
P +T M+I A +
Sbjct: 428 PDNTTYT-MVIDAFCR 442
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 106/569 (18%), Positives = 223/569 (39%), Gaps = 58/569 (10%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ + K + L +F+ M++ L PD+ + + L L+ + V++
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKS-RLSPDVKNCNRILRILRDKDLMSKAVEV------- 221
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+R + ++P +V YN +L++ + + + ++++ G P+ TY
Sbjct: 222 --------YRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 273
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + + + G+++ +M K+G + A TY L+ ++ +G + EA++ M +
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G T + Y LC GR DAM + + + + P +++ LI G++
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLA-NNLLPDVVSYNTLIYGYCRLGNLMK 392
Query: 474 CISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+F ++ + P I T N +L R A++L E
Sbjct: 393 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG------------- 439
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
+ PD TY+ ++ S + + M G +LD +A +V + G
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499
Query: 593 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTEL- 648
+ +L G P + + ++ N E+A L+ M P ++T +T +
Sbjct: 500 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVT---YTSII 556
Query: 649 ---FESNEDRISRDKLEKLLNALCNCNAASSEITV------SNLSRALHALCRSEKERDL 699
E+ R R+ ++L+ + + + + L RA +++ L
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616
Query: 700 SSSAHFGSQAIDISPLHGIHEAFD----VKETENVPS--SSASMMFENADLG-----ADP 748
+ + S + + + +A++ + E P+ S ++ EN ++G
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSL 676
Query: 749 LPQKTDVAVDIDSINHSSLSRQADADTEM 777
Q D V DS HS+L +Q D ++
Sbjct: 677 YKQMLDRGVQPDSCTHSALLKQLGKDCKL 705
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 178/464 (38%), Gaps = 85/464 (18%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL++ LS++ + + M ++GL + L+ G +KG +A+S L
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALS-------L 326
Query: 220 KDKRDLK----SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+++ LK + Y + L K GR +A++ + ML + NL PD+ +Y+++
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN-NLLPDVVSYNTLIYGYC 385
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
++G L + L + +R L P +V YN +L+ +G
Sbjct: 386 RLGNLMKAFLLFDELR---------------SIYLFPTIVTYNTLLDGLCR----QGELE 426
Query: 336 VFKQLR----KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG----------EA 381
V +QL+ G+ P TY + + + G + EFF +M G
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486
Query: 382 IGAL-------------------------TYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+G L Y V+V + G + EA ++ M GV+
Sbjct: 487 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVI 546
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
Y + NGR + + ++ S + P +T+T LI G ++
Sbjct: 547 PDYVTYTSIIHAHLENGRLRKGREIFYEMLS-KGLTPSVVTYTVLIHGHAGKGRLERAFI 605
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
F M++ PN+ T N+++ + +A F E + P
Sbjct: 606 YFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG-------------IFP 652
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
++Y+Y+ ++ + W+ +YK M G Q D H+ LL
Sbjct: 653 NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 182/445 (40%), Gaps = 44/445 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL +G A+ VLD + K + +Y +L ++G ++R+ M
Sbjct: 117 VVRGLCTRGRIADALEVLDEM-SFKGCAPIPP--MYHVILEAACRSGGFRNSVRVLEAMH 173
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C L D + V + + G + E V L+ ++ E D+
Sbjct: 174 AKGCTL--DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGC---------------EADI 216
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YNAVL + +W V + ++ + P+ T+ + + ++G ++ VHE +
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M++ G Y ++ +EG + A + M G+ Y + LC+ R
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 435 WQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
W++A ++ ++ + PL ++TF L+ G +D I + + M H C P++ T
Sbjct: 337 WKEAEELLSEM--FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ + + + +A L + + KP+ +Y+ +L+ +A +
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGC-------------KPNTVSYTIVLKGLCSAGR 441
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLF 609
W E + M GC + L+ + G L+E A + L L G P +
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG---LVEQAIELLKQMLVNGCSPDLIS 498
Query: 610 FTEMLIQAIVQSNYEKAVALINAMA 634
++ ++ E+A+ L+N M
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMV 523
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 156/407 (38%), Gaps = 75/407 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAG---RPHEALRIF 251
+LKGL W ++D + + D V + L+ L + G R HE L
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMV----RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA-- 275
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ + PDI Y ++ + + G L+ +++ RM PS +K
Sbjct: 276 --QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM---PSYGLK------------ 318
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P++V YN VL + +WK + ++ + T+ + ++ Q+G D V E
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M G +TY ++ F +EG I+EAV +++M G Y + LC+
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
GRW DA E++ S Q ++ C PN T
Sbjct: 439 AGRWVDA----EELMS-------------------------------QMIQQGCPPNPVT 463
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ + + +A EL ++ S PD +YS++++ A
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCS-------------PDLISYSTVIDGLGKAG 510
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
+ E + M G + ++ + SR G+ + + FD++
Sbjct: 511 KTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 182/445 (40%), Gaps = 44/445 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL +G A+ VLD + K + +Y +L ++G ++R+ M
Sbjct: 117 VVRGLCTRGRIADALEVLDEM-SFKGCAPIPP--MYHVILEAACRSGGFRNSVRVLEAMH 173
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C L D + V + + G + E V L+ ++ E D+
Sbjct: 174 AKGCTL--DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGC---------------EADI 216
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YNAVL + +W V + ++ + P+ T+ + + ++G ++ VHE +
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M++ G Y ++ +EG + A + M G+ Y + LC+ R
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 435 WQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
W++A ++ ++ + PL ++TF L+ G +D I + + M H C P++ T
Sbjct: 337 WKEAEELLSEM--FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ + + + +A L + + KP+ +Y+ +L+ +A +
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGC-------------KPNTVSYTIVLKGLCSAGR 441
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLF 609
W E + M GC + L+ + G L+E A + L L G P +
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG---LVEQAIELLKQMLVNGCSPDLIS 498
Query: 610 FTEMLIQAIVQSNYEKAVALINAMA 634
++ ++ E+A+ L+N M
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMV 523
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 156/407 (38%), Gaps = 75/407 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAG---RPHEALRIF 251
+LKGL W ++D + + D V + L+ L + G R HE L
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMV----RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA-- 275
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ + PDI Y ++ + + G L+ +++ RM PS +K
Sbjct: 276 --QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM---PSYGLK------------ 318
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P++V YN VL + +WK + ++ + T+ + ++ Q+G D V E
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+M G +TY ++ F +EG I+EAV +++M G Y + LC+
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
GRW DA E++ S Q ++ C PN T
Sbjct: 439 AGRWVDA----EELMS-------------------------------QMIQQGCPPNPVT 463
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
N ++ + + +A EL ++ S PD +YS++++ A
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCS-------------PDLISYSTVIDGLGKAG 510
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
+ E + M G + ++ + SR G+ + + FD++
Sbjct: 511 KTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 134/326 (41%), Gaps = 15/326 (4%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
V P V++A+ + + + F ++++ + P + + + GK D V
Sbjct: 55 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 114
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
FF+ M +G TY +++ +EG + A M+ RG+V Y +
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
GR D + E++K + +P IT+ LI G + + ++ MK + +P
Sbjct: 175 FGKVGRLDDTVCFFEEMKDM-CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 233
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ + + ++ + + M +A + + + R L P+EYTY+S+++A+
Sbjct: 234 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG-------------LVPNEYTYTSLIDAN 280
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ M G + + + L+ A + E F + AG IP+
Sbjct: 281 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 340
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAM 633
+ ++ + N ++A+ L+N +
Sbjct: 341 ASYNALIHGFVKAKNMDRALELLNEL 366
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 145/364 (39%), Gaps = 35/364 (9%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL K G+ + R F M+ P + Y+ + + + G ++ L E M+ +
Sbjct: 101 LLHRFAKLGKTDDVKRFFKDMI-GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 159
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
L PD V YN++++ + F++++ +P TY
Sbjct: 160 G---------------LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 204
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
+ + GK + EF+R+M +G ++Y LV AF +EG + +A+ +M +
Sbjct: 205 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 264
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
G+V Y L C G DA + ++ + + +T+T LI D + +
Sbjct: 265 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV-VTYTALIDGLCDAERMKE 323
Query: 474 CISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+F M PN+ + NA++ + + +A EL E L G G
Sbjct: 324 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE-----------LKGRG-- 370
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK----C 588
+KPD Y + + + + E + V M G + + + L+ ++G
Sbjct: 371 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 430
Query: 589 HLLE 592
HLL+
Sbjct: 431 HLLD 434
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 119/306 (38%), Gaps = 19/306 (6%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+F R M +GL L+ +G +QA+ + ++ + + + YT L+
Sbjct: 221 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK---FYVDMRRVGLVPNEYTYTSLI 277
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
K G +A R+ N ML+ + ++ Y ++ L +KE +L +M
Sbjct: 278 DANCKIGNLSDAFRLGNEMLQ-VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG- 335
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ P+L YNA+++ V + + +L+ G+KP YG
Sbjct: 336 --------------VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 381
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
+ + K + +M + G +L Y L+ A+++ G E + + M++ +
Sbjct: 382 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 441
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 475
T + L LC N A+ +I + + FT +I ++
Sbjct: 442 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 501
Query: 476 SIFQHM 481
++F+ M
Sbjct: 502 TLFEQM 507
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 73/393 (18%), Positives = 154/393 (39%), Gaps = 29/393 (7%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLM 187
L D +LG++ VEW+ L+D L + E + + M+ +G++
Sbjct: 286 LSDAFRLGNEMLQVGVEWN--------VVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 337
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
L+ G + +A+ +L+ + G K DL +Y + L + A
Sbjct: 338 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL---LLYGTFIWGLCSLEKIEAA 394
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
+ N M E C + + Y ++ + G E + L++ M++
Sbjct: 395 KVVMNEMKE-CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD------------- 440
Query: 308 PVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
+E +V + +++ C K V + + GL+ +AA + ++ + + + +
Sbjct: 441 --IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 498
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F +M + G Y L+ +++G + EA+A M + G+ Y L
Sbjct: 499 AATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 558
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 486
L + + Q A +E++ P E+ ++ + G ID+ + + ++ H
Sbjct: 559 WGLSHCNQLQKARSFLEEMIG-EGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 617
Query: 487 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
NA+ +YS ++ S + +ET +N
Sbjct: 618 LTSDNDNALPNIYSDQNLVSSREHEEQETRISN 650
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 146/357 (40%), Gaps = 61/357 (17%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
++V NAV+ A S + V F++L K G KP+A TY ++ ++++G L E
Sbjct: 14 VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLD 73
Query: 374 KMAKSG-------------------------------EAIGA----LTYKVLVRAFWEEG 398
KM K+G +++G TY +L+R+
Sbjct: 74 KMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 458
+ EA ME+RG +A Y + C GR + AM+V++K+ ++ P + T
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLD-KNLAPDDYTL 192
Query: 459 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET-- 515
LI + G + IF+ M K N + NAML + A + +E
Sbjct: 193 NSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEA 252
Query: 516 --TRANSSGY-TFLSGDG-----------------APLKPDEYTYSSMLEASATA-HQWE 554
+ NS + T ++ G A L PD +TY+ M+EA A A + +
Sbjct: 253 RGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGK 312
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
FE ++ M +GC + + L+ +AG+ + + + G +P + T
Sbjct: 313 AFE-MFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITAT 368
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 27/290 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V++D L + M + K M G + L++ LG +A + D +
Sbjct: 89 VVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDE---M 145
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+++ S YT ++ I KAGR A+ + ML D NL PD +S+ + + G
Sbjct: 146 EERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKML-DKNLAPDDYTLNSLITAVSRTGR 204
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPV--------------------LEPDLVVYNA 319
+ ++ ERM++ D ++P+ + +N
Sbjct: 205 TELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNT 264
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++N + + V +++R +GL P TY +E ++G E F M K+G
Sbjct: 265 LINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAG 324
Query: 380 EAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG---TASVYYELA 426
+ +TY +L+ A + G+ +A +M+++G++ TA+V +LA
Sbjct: 325 CSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLA 374
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 108/278 (38%), Gaps = 54/278 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L GLG +A + + + D + Y L+ LG+ R EA +F+ M
Sbjct: 90 VLDGLGKANMMDEACKLFASMKSMGCPAD---DYTYAILIRSLGRCKRDEEATLLFDEM- 145
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ P AY +V + G ++ + ++++M D L PD
Sbjct: 146 EERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKM---------------LDKNLAPDDY 190
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N+++ A + + + +F++++KSG+ + ++ ++ ++GK L ++F +M
Sbjct: 191 TLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEM 250
Query: 376 AKSG----------------------EAIGAL-------------TYKVLVRAFWEEGKI 400
G EA L TY ++ AF + G +
Sbjct: 251 EARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNM 310
Query: 401 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
+A +ME+ G Y L L GR+QDA
Sbjct: 311 GKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDA 348
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 159/398 (39%), Gaps = 51/398 (12%)
Query: 225 LKSRFV------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+KSR V +T L+ +AG EA+ FN M ED PD A+ V L +
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM-EDYGCVPDQIAFSIVISNLSRKR 235
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
E + ++ + EPD++VY ++ + + VFK
Sbjct: 236 RASEAQSFFDSLKDR----------------FEPDVIVYTNLVRGWCRAGEISEAEKVFK 279
Query: 339 QLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEG 398
++ +G++P+ TY + ++ + + G+ H+ F M SG A A+T+ L+R + G
Sbjct: 280 DMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 399 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-- 456
+ + + M++ G Y L C + ++A+ V+ + K E+
Sbjct: 340 RPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMI----KKKCEVNA 395
Query: 457 -TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS---RNDMFSKAKEL 511
TF + ++ ++ M + CEPN T N ++++++ DM K K+
Sbjct: 396 STFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKK- 454
Query: 512 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 571
D ++P+ TY ++ W ++K M C
Sbjct: 455 ---------------DMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTP 499
Query: 572 Q-TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + +L + RAG+ E + +++ G + PL
Sbjct: 500 SLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVTRPL 537
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 147/416 (35%), Gaps = 87/416 (20%)
Query: 298 IKNMHRKNW----DPVLEPDLV-------------------VYNAVLNAC------VPSH 328
IK+ +RKN D VL P L V V+ C +P H
Sbjct: 72 IKDHYRKNPTNPNDAVLNPSLTLPALSLDFSQIDASRISPSVVRCVIEKCGSVRHGIPLH 131
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
Q F+ + R + S Y +++ + ++DL M I T+
Sbjct: 132 QSLA-FFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFT 190
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+L+R + G +EAV ME G V
Sbjct: 191 ILIRRYVRAGLASEAVHCFNRMEDYGCV-------------------------------- 218
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKA 508
P +I F+ +I + + S F +KD EP++ +++ + R S+A
Sbjct: 219 ----PDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEA 274
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
+++F++ A ++P+ YTYS +++A Q V+ M SGC
Sbjct: 275 EKVFKDMKLAG-------------IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 628
+ L+ +AG+ + ++ + + G P + + ++ N E AV
Sbjct: 322 APNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVK 381
Query: 629 LINAMAYAPFHITERQWTELFESNEDRISRD------KLEKLLNALCNCNAASSEI 678
++N M + + +F E + RD K++ A C N + I
Sbjct: 382 VLNTMIKKKCEVNASTFNTIFRYIEKK--RDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 32/272 (11%)
Query: 448 LRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 503
L S+ +EI TFT LI + G + + F M+D+ C P+ + ++ SR
Sbjct: 176 LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKR 235
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
S+A+ F+ +PD Y++++ A + E V+K M
Sbjct: 236 RASEAQSFFDSLKDR--------------FEPDVIVYTNLVRGWCRAGEISEAEKVFKDM 281
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
L+G + + ++ ++ R G+ F +L++G P+ + F ++ +
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRP 341
Query: 624 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL----CNCNAASSEIT 679
EK + + N M + L E++ + + K+LN + C NA+ T
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNAS----T 397
Query: 680 VSNLSRALHALCRSEKERDLSSSAHFGSQAID 711
+ + R + EK+RD++ + S+ ++
Sbjct: 398 FNTIFRYI------EKKRDVNGAHRMYSKMME 423
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 188/455 (41%), Gaps = 44/455 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL + + +AMS L + ++ + + Y LL+ K + RI N+M+
Sbjct: 48 MISGLMEASYFDEAMSFL---HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 104
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW---DP 308
E CN P+ + ++S+ + KL+ RM P + N+ + +
Sbjct: 105 TEGCN--PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 162
Query: 309 VLEPDLV-----VYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQS 362
+ PDL+ +Y +L A CV + K + A + +
Sbjct: 163 LPSPDLLDLAEKIYGEMLAANCVLN------------------KVNVANFA---RCLCGV 201
Query: 363 GKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
GK+D + ++M + G TY ++ K+ +A + M+ GV Y
Sbjct: 202 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 261
Query: 423 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 482
L C G + A + E+++S+ S P +T+T LI + + + IF M
Sbjct: 262 TILIDSFCKAGLIEQAQWLFEEMRSVGCS-PTVVTYTALIHAYLKAKQVPQANDIFHRMV 320
Query: 483 D-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE---TTRANSSGYTFLSGDGAPLKPDEY 538
D C PN T A++ + SKA E++ + T+ + S + F D L P+
Sbjct: 321 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 380
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
TY ++++ AH+ ++ + M SGC+ + + L+ +AGK + F +
Sbjct: 381 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 440
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ G +P +T ++ + + A+ +++ M
Sbjct: 441 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 475
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 10/289 (3%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ KA + +A IF+ M+ D P+ Y ++ L + G + + ++ ++
Sbjct: 296 YTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 354
Query: 291 RQKPSKRIKNMHRKNWD-PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + D L P++V Y A+++ +H+ + + SG +P+
Sbjct: 355 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 414
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ ++GK D E F +M K G TY L+ +++G+++ A+ +
Sbjct: 415 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 474
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK---PLEITFTGLIISSM 466
M + Y + LC G + A+ K+ SL K P +T+T LI
Sbjct: 475 MLKDSCTPNVVTYTAMIDGLCRIGESEKAL----KLLSLMEEKGCSPNVVTYTALIDGLG 530
Query: 467 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
G ID + +F M + C PN T ++ + KA+ L E
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 579
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 95/246 (38%), Gaps = 49/246 (19%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ VY L+ KAG+ A +F L + C P + Y S+ + + G L +K+
Sbjct: 413 NHIVYDALIDGFCKAGKIDSAQEVF-LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 471
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +M + P++V Y A+++ + + + + + G
Sbjct: 472 LSQMLKDSCT---------------PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 516
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA--- 403
P+ TY ++ + ++GK DL + F +M++ G + +TY+VL+ G +++A
Sbjct: 517 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 576
Query: 404 ------------------------------VAAVRNMEQRGVVGTASVYYELACCLCNNG 433
+ + ME G V A VY L C G
Sbjct: 577 LGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAG 636
Query: 434 RWQDAM 439
R + AM
Sbjct: 637 RLEIAM 642
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/420 (17%), Positives = 151/420 (35%), Gaps = 61/420 (14%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L G+ +A ++ M+ PD + Y V L +++ L + M+
Sbjct: 198 LCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG--- 253
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ PD+ Y ++++ + + W+F+++R G P+ TY +
Sbjct: 254 ------------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 301
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
L++ + ++ F +M +G +TY LV + G I++A +
Sbjct: 302 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 361
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH-IDDCIS 476
+ Y+ C + RH+ + G ++ + H +D
Sbjct: 362 DSDFYFP-----CED----------------RHTLAPNVVTYGALVDGLCKAHKVDHAHE 400
Query: 477 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTFLS------ 527
+ M CEPN +A++ + + A+E+F + T+ S +T+ S
Sbjct: 401 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 460
Query: 528 GDGA--------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 573
DG P+ TY++M++ + E + M GC +
Sbjct: 461 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 520
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
+ L+ +AGK L F + G P+ + + ++ +KA L+ M
Sbjct: 521 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 25/247 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
++ GL G +A+ +L +++K + YT L+ LGKAG+ +L +F M
Sbjct: 490 MIDGLCRIGESEKALKLLSL---MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 546
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C+ P+ Y + L GLL + L+ M+Q W L+
Sbjct: 547 RKGCS--PNYVTYRVLINHLCAAGLLDKARLLLGEMKQT-----------YWPKYLQG-- 591
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y + S + + +++ G P A YG+ ++ ++G+ ++ E ++
Sbjct: 592 --YRCAIQG--FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 647
Query: 375 MAKSGEAIGALT--YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
M + ++ Y L++A ++ EA M +RG V SV+ L L
Sbjct: 648 MMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEV 707
Query: 433 GRWQDAM 439
+W +A+
Sbjct: 708 KKWDEAL 714
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 27/239 (11%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V Q+ K P+ TY ++ + + G+ + + M + G + +TY L+
Sbjct: 471 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 530
Query: 396 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 455
+ GKI+ ++ M ++G Y L LC G A L++ ++K K L+
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 590
Query: 456 ------ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML-KVYSRNDMFSKA 508
F+ I+S+ I + M+ + I V ML +S+ A
Sbjct: 591 GYRCAIQGFSKSFIASL---------GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 641
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
EL +E SS +K D Y+S+++A A Q E +Y M G
Sbjct: 642 MELHKEMMEVPSS-----------VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRG 689
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 131/330 (39%), Gaps = 23/330 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+E +L+++N +LN + + + + +++ + G++P + TY L +E +
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 410
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
E +M K A LTY V++ G + A +R M G+ A VY L
Sbjct: 411 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 470
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
GR +++ +++E+++ + P + LII +++ + M + PN
Sbjct: 471 AKEGRVEESRMILERMRE-QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 529
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
T A + YS+ A F E + P+ Y++++E
Sbjct: 530 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCG-------------VLPNVGIYTALIEGHC 576
Query: 549 ----TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
+ F ++ L D ++ L+ SR GK H F L E G +
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQ----DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 632
Query: 605 PHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
P+ + ++ + Q N +KA L+ M
Sbjct: 633 PNAFTYNSLISGSCKQGNVDKASQLLEEMC 662
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/424 (19%), Positives = 163/424 (38%), Gaps = 41/424 (9%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KAG A R FN ML C + P++ Y ++ + G + E + R S+R+
Sbjct: 542 KAGEMEIADRYFNEML-SCGVLPNVGIYTALIEGHCKEGNVTEAFSVF---RFILSRRVL 597
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVM 359
D+ Y+ +++ + + F +F +L++ GL P+A TY +
Sbjct: 598 Q------------DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645
Query: 360 LQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 419
+ G D + +M G +TY +L+ + G+I A ++E RG+
Sbjct: 646 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 705
Query: 420 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 479
Y + C + A ++E++ LR P + ++ + + +FQ
Sbjct: 706 VTYAAMVDGYCKSKNPTAAFQLLEEML-LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQ 764
Query: 480 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYTFL--------- 526
M + + + N +++ Y ++ +A L EE N YT L
Sbjct: 765 EMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 824
Query: 527 SGDGAPL---------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
G+ L P TY+S+L +++ M G + D+ +
Sbjct: 825 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 884
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV-QSNYEKAVALINAMAYA 636
++ R G D +L G +P + + LIQA+ + + + + L+N + +
Sbjct: 885 MIDAYCREGNVMEACKLKDEILVKG-MPMSVAAYDALIQALCKKEEFFEVLKLLNEIGES 943
Query: 637 PFHI 640
F +
Sbjct: 944 GFRL 947
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 19/225 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G ++A +L+ + +K+ + + YT L+ KAG EA R++ L +
Sbjct: 780 LIEGYCKSGKLQEANHLLEEMI---EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLW-LEM 835
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ N+ P Y S+ +G + E+ L E M K +EPD +
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG---------------IEPDKM 880
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y +++A + ++ G+ S A Y ++ + + ++ V + ++
Sbjct: 881 TYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEI 940
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+SG +G T V+ R F G ++EA +R+M + G V +
Sbjct: 941 GESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTT 985
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 182/463 (39%), Gaps = 76/463 (16%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
++L L K G EA ++ ++M + + + + L++ LV+ I R+ +
Sbjct: 27 EILHNLCKKGSLMEATKLIDIM----------SRVNQIPNSTCSTNLIRGLVR-IGRI-E 74
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ S+ +K M L PD++ YN ++ Q + + + + SG P TY
Sbjct: 75 RASRVLKTMVMSG----LVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITY 130
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW----------------- 395
+ + +GK+D EF+R + G + Y +L+ W
Sbjct: 131 NTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAI 190
Query: 396 ------------------EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+EGK +A + N+ G+ A Y L LC+ G W +
Sbjct: 191 EGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDE 250
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAML 496
++ +K H P +T+ LI G ++ I+ F Q + ++C P+I T N +L
Sbjct: 251 VDEILAIMKKTSH-PPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLL 309
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
+ M +A ++F + +N S P TY+++++ +
Sbjct: 310 TALCKEGMVDEALQVFVLLSDSNCS-------------PGLITYNTVIDGLTRRGYMDEA 356
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL--LEHAFDSLLEAGEIPHPLFFT--E 612
+Y M G D H L+ G C + +E A + L E G+ H + +
Sbjct: 357 LKLYNQMIEKGIAPDGITHRSLV-----WGFCWIDQVEDAVEILREMGKRDHRINSSAYR 411
Query: 613 MLIQAIVQSN-YEKAVALINAMAYAPFHITERQWTELFESNED 654
++I + ++ + A+ ++ M + E ++ L +S D
Sbjct: 412 LVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVAD 454
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 24/264 (9%)
Query: 231 YTKLLAILGKAGRPHEA-LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL---LKELVKL 286
Y L+ K G+ +A L I+N++ + P+ Y+S+ +L GL + E++ +
Sbjct: 200 YNSLVNFASKEGKYEDAALIIYNILSH--GMEPNAITYNSLLHSLCSCGLWDEVDEILAI 257
Query: 287 IERMRQKPS-----------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
+++ P+ +R N + PD++ YN +L A
Sbjct: 258 MKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGM 317
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
VF L S P TY ++ + + G D + + +M + G A +T++
Sbjct: 318 VDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRS 377
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
LV F ++ +AV +R M +R +S Y + LC N R A+ V+E + S R
Sbjct: 378 LVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGR 437
Query: 450 HSKPLEITFTGLIISSMDGGHIDD 473
+ KP E ++ LI S D G +++
Sbjct: 438 Y-KPDEEIYSTLIKSVADAGMVEE 460
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 105/266 (39%), Gaps = 24/266 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PDLV YN+++N +++ + + G++P+A TY + + G +D V E
Sbjct: 195 PDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEI 254
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
M K+ +TY +L+ + G + A+ M Y L LC
Sbjct: 255 LAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCK 314
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 490
G +A+ V + S + P IT+ +I G++D+ + ++ M + P+
Sbjct: 315 EGMVDEALQVF-VLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGI 373
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYTFLSGD----------------- 529
T +++ + D A E+ E R NSS Y +
Sbjct: 374 THRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMM 433
Query: 530 -GAPLKPDEYTYSSMLEASATAHQWE 554
KPDE YS+++++ A A E
Sbjct: 434 ISGRYKPDEEIYSTLIKSVADAGMVE 459
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 157/374 (41%), Gaps = 26/374 (6%)
Query: 327 SHQWKGVFWVFKQLR-KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGAL 385
S+ W F FK + ++G + S +Y ++++ + K+DL+ E +M + G +
Sbjct: 130 SNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLA 189
Query: 386 TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 445
T ++R + +A+ A R ME+ GV L L + A V +
Sbjct: 190 TMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEF 249
Query: 446 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRND 503
K P TF LI +D+ + MK+H C P++ + ++++ Y R
Sbjct: 250 KDSILLNPH--TFNVLIHGWCKARKMDNALKSMAEMKEHGFC-PDVISYTSIVEAYCREK 306
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
F K + E + G P P+ TY+ ++ A + VY+ M
Sbjct: 307 DFRKVNSVLNE-----------MEEKGCP--PNVVTYTIVMHALGKGKEISKALEVYEKM 353
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 623
S C D + ++ L+ S+AG+ F+ + + G IP L + M+ A + S
Sbjct: 354 KGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQE 413
Query: 624 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEIT--VS 681
E A+ L+ M + ++ L + R+ K+L+AL N + ++I+ V
Sbjct: 414 EDALKLLLKMEESSCKPDLNTYSPLLK----MCCRNNRMKVLSALLN-HMFKNDISLEVG 468
Query: 682 NLSRALHALCRSEK 695
S +H LC+S K
Sbjct: 469 TYSLLVHGLCKSGK 482
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/333 (17%), Positives = 138/333 (41%), Gaps = 38/333 (11%)
Query: 306 WDPVLEPD-------LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEV 358
W+ V E D L V+ + +WK F+ + + G+K M+
Sbjct: 173 WELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDA 232
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
+++ + ++ F + K + T+ VL+ + + K++ A+ ++ M++ G
Sbjct: 233 LVKENSVEHANDVFVEF-KDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPD 291
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
Y + C ++ V+ +++ + P +T+T ++ + G I + ++
Sbjct: 292 VISYTSIVEAYCREKDFRKVNSVLNEMEE-KGCPPNVVTYTIVMHALGKGKEISKALEVY 350
Query: 479 QHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS-----SGYTFLSG---- 528
+ MK C P+ ++++ + S+ A+++FE+ T+ + + T +S
Sbjct: 351 EKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMH 410
Query: 529 -------------DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
+ + KPD TYS +L+ ++ + + M + L+ +
Sbjct: 411 SQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTY 470
Query: 576 AWLLVEASRAGKCHLLEHA---FDSLLEAGEIP 605
+ L+ ++GK LEHA F+ ++ G +P
Sbjct: 471 SLLVHGLCKSGK---LEHACLFFEEMVSKGLVP 500
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ IL KAGR +A +F M + + PD+ Y+++ ++ +KL+ +M
Sbjct: 365 YSSLIYILSKAGRLKDARDVFEDMTKQGAI-PDVLTYNTMISAACMHSQEEDALKLLLKM 423
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ K PDL Y+ +L C +++ K + + + K+ +
Sbjct: 424 EESSCK---------------PDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVG 468
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
TY L + + +SGK + FF +M G
Sbjct: 469 TYSLLVHGLCKSGKLEHACLFFEEMVSKG 497
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/352 (17%), Positives = 132/352 (37%), Gaps = 28/352 (7%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+R + +VD L + + W+ V M++ G + M K+++ L W+ A+
Sbjct: 149 YRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAI 208
Query: 211 SVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI--AA 266
+ +G+K K L+ L K A +F + L P
Sbjct: 209 EAFRGMERFGVK-----KDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVL 263
Query: 267 YHSVAVTLGQVGLLKELVKLIER----------------MRQKPSKRIKNMHRKNWDPVL 310
H LK + ++ E R+K +++ ++ + +
Sbjct: 264 IHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGC 323
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P++V Y V++A + V+++++ S P + Y + ++ ++G+ +
Sbjct: 324 PPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARD 383
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F M K G LTY ++ A + +A+ + ME+ + Y L C
Sbjct: 384 VFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCC 443
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHM 481
N R + ++ + ++ LE+ T++ L+ G ++ F+ M
Sbjct: 444 RNNRMKVLSALLNHM--FKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEM 493
>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
Length = 594
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/375 (19%), Positives = 134/375 (35%), Gaps = 48/375 (12%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD++ YN V+ + + + SG P TY + M +G +D EF
Sbjct: 205 PDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEF 264
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
+++ + G +TY +L+ W+ A+ + M G Y L C
Sbjct: 265 WKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCK 324
Query: 432 NGRWQDAMLVVE----------------------------------KIKSLRHSKPLEIT 457
G+++DA LV++ KI S+ P +T
Sbjct: 325 QGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVT 384
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
LI G +D I+ M + C P+I T N +L + M +A +L T
Sbjct: 385 CNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLT 444
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
S P +Y+++L+ + + +Y M +G D T H
Sbjct: 445 DTACS-------------PGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHR 491
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
++ R+ K +L+ G + F+ ++ + + + A+ ++ M +
Sbjct: 492 SIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSS 551
Query: 637 PFHITERQWTELFES 651
P E ++ + S
Sbjct: 552 PCKSNETIYSTIINS 566
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 23/249 (9%)
Query: 390 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 449
++R F ++++AV ++ M G V Y + CLC G + A+ ++ + SL
Sbjct: 178 MIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDM-SLS 236
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKA 508
P IT+ +I D G D + + + ++ P + T ++++ ++ A
Sbjct: 237 GCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCA 296
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
E+ EE AN Y PD TY+S++ + ++E V + G
Sbjct: 297 LEVLEEM--ANEGCY-----------PDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGM 343
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI---PHPLFFTEMLIQAIVQSN-YE 624
D + LL SR G H E D +L+ I P + +LI + ++ +
Sbjct: 344 VPDAVTYNTLLHSLSRRG--HWDE--VDEILKIMSISLQPPTVVTCNVLINGLCKNGLLD 399
Query: 625 KAVALINAM 633
A+ +N M
Sbjct: 400 SAINFLNQM 408
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 88/229 (38%), Gaps = 23/229 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT--KLLAILGKAGRPHEALRIFNL 253
LL L +G W + +L + L+ V T L+ L K G A+ N
Sbjct: 353 LLHSLSRRGHWDEVDEILKIM-----SISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQ 407
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M N PDI Y+++ L + G++ E +L+ + D P
Sbjct: 408 MFSY-NCLPDIITYNTLLGALCKEGMVDEAFQLLHLLT---------------DTACSPG 451
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
L+ YN VL+ ++ Q+ ++G+ P T+ + +S K+ E +
Sbjct: 452 LISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLK 511
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+ K G + + Y++LV K++ A+ + M ++Y
Sbjct: 512 GILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIY 560
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/411 (18%), Positives = 164/411 (39%), Gaps = 39/411 (9%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-- 290
+++ +L ++GR +AL++F+ M PD + + LL L+ +
Sbjct: 152 QIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 211
Query: 291 -------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
R + + R D V PD+ +N V+ Q +
Sbjct: 212 FGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQ 271
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI-GALTYKVL 390
+ +++ + G P T+ + ++ + ++ + HE R++ + G + +T+ +
Sbjct: 272 KALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSV 331
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ + + GK+ +A+A +M G++ Y L G A+ V +++ LR
Sbjct: 332 ISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR- 390
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
P +TF+ LI G +DD + I+ M H +PN+ T + ++ + + +A
Sbjct: 391 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 450
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
L E L D + P + Y+ +++ + + + KGM GC+
Sbjct: 451 CLLNELN---------LRPD---IAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCR 498
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL---FFTEMLIQA 617
D+ + L++ + F ++EAG P + F L++A
Sbjct: 499 PDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 549
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 133/315 (42%), Gaps = 22/315 (6%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y KL++ L GR H+ + +F ++D PD+ +++ V + +VG +++ ++L+E
Sbjct: 219 YAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVE 278
Query: 289 RMRQ---KPSKRIKN------------------MHRKNWDPVLEPDLVVYNAVLNACVPS 327
RM + P N + R D V P++V + +V++ +
Sbjct: 279 RMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKA 338
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + V+ + SG+ P+ TY + + + G E +++M + +T+
Sbjct: 339 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTF 398
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
L+ + G++++A+ +M Q + + + LC R +A+ ++ ++
Sbjct: 399 SSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNL 458
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 506
P + +I G +D+ I + M++ C P+ T ++ Y S
Sbjct: 459 RPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRIS 518
Query: 507 KAKELFEETTRANSS 521
+A F E A S
Sbjct: 519 EAIMFFHEMVEAGCS 533
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 88/223 (39%), Gaps = 18/223 (8%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M SG+M L+ G G G A+ V + L+ D+ + ++ L+ +
Sbjct: 351 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVT---FSSLIDGYCR 407
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G+ +ALRI++ M + + P++ + + +L + E + L+ +
Sbjct: 408 CGQLDDALRIWSDMAQH-RIQPNVYTFSIIIHSLCKQNRSDEAICLLNEL---------- 456
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
N P + P +YN V++ + + K + + G +P TY + +
Sbjct: 457 ----NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYC 512
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
+ FF +M ++G + ++T + + G NE
Sbjct: 513 MKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 555
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 192/454 (42%), Gaps = 50/454 (11%)
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
Q +LL L R+A+ V++ + G D S YT L++ L + G A+++
Sbjct: 99 QATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASS---YTFLVSSLCRKGNVGYAMQLV 155
Query: 252 NLMLEDCNLYP-DIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS------------ 295
+ M E YP + Y+S+ L G L + ++L++R+ QK P+
Sbjct: 156 DKMEEYG--YPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAY 213
Query: 296 -KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+R + K D ++ EP+LV YN +L + + +F++L G P+
Sbjct: 214 KERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVV 273
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+Y + + + G+++ + +M + +TY +L+ + G+ A+ + M
Sbjct: 274 SYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEM 333
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL--RHSKPLEITFTGLIISSMDG 468
+ TAS Y + LC +G+ LVV+ + + RH P E T+ I + +
Sbjct: 334 IRARFKPTASSYNPIIAHLCKDGKLD---LVVKCLDQMMYRHCNPNEGTYNA-IATLCEE 389
Query: 469 GHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G + + SI Q + K H + + + + + + L+E T G+T
Sbjct: 390 GMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMT----KYGFT-- 443
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
PD +TYSS++ ++ M + + D + L++ ++
Sbjct: 444 --------PDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLILGCCKSR 494
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 620
+ L F+ ++ G +P+ +T +L++ I+
Sbjct: 495 RTDLALDVFEIMVGKGYLPNETTYT-ILVEGIIH 527
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 117/291 (40%), Gaps = 17/291 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+PD+ +L + + + V + + SG+ P A++Y + + + G +
Sbjct: 94 KPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQ 153
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY-YELACCL 429
KM + G +TY LVR G + +++ + + Q+G+V A Y + L
Sbjct: 154 LVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAY 213
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
G + + L+ E I + +P +++ L+ G +D I +F+ + PN
Sbjct: 214 KERGADEASKLLDEIIA--KGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPN 271
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + N +L+ + +A L E +G P TY+ ++ + A
Sbjct: 272 VVSYNILLRSLCNEGRWEEANVLLAEM-------------NGDERSPSTVTYNILIGSLA 318
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
+ E+ V + M + + + + ++ + GK L+ D ++
Sbjct: 319 LHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMM 369
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 105/294 (35%), Gaps = 87/294 (29%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ L ++G W +A +L + G D+R S Y L+ L GR AL + M+
Sbjct: 278 LLRSLCNEGRWEEANVLLAEMNG--DERS-PSTVTYNILIGSLALHGRTEHALEVLEEMI 334
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P ++Y+ + L + G L +VK +++M M+R P+
Sbjct: 335 R-ARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQM----------MYRH-----CNPNEG 378
Query: 316 VYNAVLNAC------------------------------VPSHQWKG----VFWVFKQLR 341
YNA+ C + S KG F + ++
Sbjct: 379 TYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMT 438
Query: 342 KSGLKPSAATY-----GLAMEVML-----------------------------QSGKYDL 367
K G P + TY GL ME ML +S + DL
Sbjct: 439 KYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDTENYNSLILGCCKSRRTDL 498
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 421
+ F M G TY +LV E +++ A +R ++ R V+ +++
Sbjct: 499 ALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTL 552
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 175/422 (41%), Gaps = 49/422 (11%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
K WR E ++ L D++ ++ K+ +FV I++ + T ++K +G + SW+
Sbjct: 121 KDWR---ERVKFLTDKI----LSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQE-SWQ 172
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ V +W+ L+ +R V +L +LG+ + A+ IF + + + Y
Sbjct: 173 RALEVFEWL-NLRHWHSPNARMV-AAILGVLGRWNQESLAVEIFTR--AEPTVGDRVQVY 228
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIK------NMHRKNWDPV 309
+++ + G + +L++ MRQ+ + R+K N+ + D V
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 310 ----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
L PD + YN +L+AC G VF+ + +P TY + V + G
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
F ++ G A+TY L+ AF E + + M++ G Y +
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 484
G+ A+ + + +K L P IT+T LI S + ++ M D
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+P + T +A++ Y++ +A++ F R+ + KPD YS ML
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGT-------------KPDNLAYSVML 515
Query: 545 EA 546
+
Sbjct: 516 DV 517
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 24/332 (7%)
Query: 325 VPSHQWKGVFWVFKQLR-KSGLKPSAATYGLAMEVMLQSGKYDLVHEFF-RKMAKSGEAI 382
V W+ VF+ L + P+A + V+ + + L E F R G+ +
Sbjct: 166 VGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRV 225
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
Y ++ + GK ++A V M QRG V + L +G L V
Sbjct: 226 Q--VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN-LAV 282
Query: 443 EKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
E + +R+S +P IT+ L+ + ++D + +F+ M+ H C+P++ T NAM+ VY
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
R + ++A+ LF E L G PD TY+S+L A A E + V
Sbjct: 343 GRCGLAAEAERLFMELE---------LKG----FFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE-AGEIPHPLFFTEMLIQAI 618
Y+ M G D+ + ++ + G+ L + + +G P + +T +LI ++
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT-VLIDSL 448
Query: 619 VQSNYE-KAVALINAMAYAPFHITERQWTELF 649
++N +A AL++ M T + ++ L
Sbjct: 449 GKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PDL +N++++A ++ +F + + G P+ + + + + G+ + ++
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
++ G I + +++ AF G I E +M+ G + T +Y + LC
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD---CISIFQHMKDH-CEP 487
R +DA ++V +++ L I + L + + I+D + ++Q +K+ EP
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYT----AIEDYKKTVQVYQRIKETGLEP 960
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG-DGAPLKPDEYTYSSMLEA 546
+ T N ++ +Y R+ R GY + L P TY S++ A
Sbjct: 961 DETTYNTLIIMYCRD--------------RRPEEGYLLMQQMRNLGLDPKLDTYKSLISA 1006
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQT 573
E E +++ + G +LD++
Sbjct: 1007 FGKQKCLEQAEQLFEELLSKGLKLDRS 1033
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 105/250 (42%), Gaps = 22/250 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ---VGLLKELVK 285
+ Y ++++ G+ G EA R+F + LE +PD Y+S+ + +KE+ +
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLF-MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQ 391
Query: 286 LIERM----RQKPSKRIKNMHRKN--WDPVLE------------PDLVVYNAVLNACVPS 327
+++M + I +M+ K D L+ PD + Y ++++ +
Sbjct: 392 QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 451
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + ++ G+KP+ TY + ++GK + + F M +SG L Y
Sbjct: 452 NRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 511
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
V++ + +A R+M G + ++Y + L R D + ++
Sbjct: 512 SVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Query: 448 LRHSKPLEIT 457
L PLEI+
Sbjct: 572 LCGMNPLEIS 581
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 183/443 (41%), Gaps = 49/443 (11%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
K WR E ++ L D++ ++ K +FV I++ + T ++K +G + SW+
Sbjct: 121 KDWR---ERVKFLTDKI----LSLKPNQFVADILDARPVQMTPTDYCFVVKSVGQE-SWQ 172
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ V +W+ L+ +R V +L +LG+ + A+ IF + + + Y
Sbjct: 173 RALEVFEWL-NLRHWHSPNARMV-AAILGVLGRWNQESLAVEIFTR--AEPTVGDRVQVY 228
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIK------NMHRKNWDPV 309
+++ + G + +L++ MRQ+ + R+K N+ + D V
Sbjct: 229 NAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMV 288
Query: 310 ----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
L PD + YN +L+AC +G VF+ + +P TY + V + G
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
F ++ G + A+TY L+ AF E + + M++ G Y +
Sbjct: 349 AEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 484
G+ A+ + + +K L P IT+T LI S + ++ M D
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVG 468
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+P + T +A++ Y++ +A++ F R+ + KPD YS ML
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGT-------------KPDNLAYSVML 515
Query: 545 EASATAHQWEYFEYVYKGMALSG 567
+ ++ +Y+ M G
Sbjct: 516 DVLLRGNETRKAWVLYRDMISDG 538
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/430 (17%), Positives = 171/430 (39%), Gaps = 38/430 (8%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S V ++ + K G P A ++ N + Y + G++ L ++ +
Sbjct: 715 SESVCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESV 774
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +RQ S R PDL +N++++A ++ +F + + G
Sbjct: 775 VGNLRQ--SGRT-------------PDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPS 819
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ + + + G+ + ++ ++ G I + +++ AF G I E
Sbjct: 820 PTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKI 879
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+M+ G + T +Y + LC R +DA ++V +++ L I + L + ++
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTV 939
Query: 467 DGGHIDD---CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
I+D + ++Q +K+ EP+ T N ++ +Y R+ R G
Sbjct: 940 ----IEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRD--------------RRPEEG 981
Query: 523 YTFLSG-DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
Y+ + L P TY S++ A E E +++ + G +LD++ + ++
Sbjct: 982 YSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
+ +G E + AG P +++ N ++A +++ + +T
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELT 1101
Query: 642 ERQWTELFES 651
++ + ++
Sbjct: 1102 TLPYSSVIDA 1111
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 101/518 (19%), Positives = 204/518 (39%), Gaps = 72/518 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ---VGLLKELVK 285
+ Y ++++ G+ G EA R+F + LE PD Y+S+ + +KE+ +
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLF-IELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQ 391
Query: 286 LIERM----RQKPSKRIKNMHRKN--WDPVLE------------PDLVVYNAVLNACVPS 327
+++M + I +M+ K D L+ PD + Y ++++ +
Sbjct: 392 QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 451
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + ++ G+KP+ TY + ++GK + + F M +SG L Y
Sbjct: 452 NRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 511
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
V++ + +A R+M G + S+Y + L R D + ++
Sbjct: 512 SVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEE 571
Query: 448 LRHSKPLEITFTGLIISSMDGGHIDDCIS--IFQHMKDHCEPNIGTVNAMLKVYSRNDMF 505
L PLEI+ S + G D + + + + E T+ ++L YS +
Sbjct: 572 LCGMNPLEIS------SVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRH 625
Query: 506 SKAKELFEETTRANSSGYTFLSGD------------GAPLKPDEY--------------- 538
S+A EL E + ++SG L + GA L DEY
Sbjct: 626 SEAFELL-EFLKEHASGSKRLINEALIVLHCKVNNIGAAL--DEYLADPCVHGWCFGGST 682
Query: 539 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
Y ++L + V+ + LSGC+ ++ ++V + G E A+ +
Sbjct: 683 MYETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVVVYCKLG---FPETAYQVV 739
Query: 599 LEAGEIPHPLFFTEMLIQAIVQSN-----YEKAVALINAMAYAPFHITERQWTELFESNE 653
+A E F + I+++ ++KA +++ + + + W L +
Sbjct: 740 NQA-ETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYA 798
Query: 654 DRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 691
+ ++ + N + + TV ++++ LHALC
Sbjct: 799 ECGCYERARAIFNTMMRDGPSP---TVESINKLLHALC 833
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 88/242 (36%), Gaps = 30/242 (12%)
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKDHCEPNIGTVN 493
WQ A+ V E + +LRH I+ + + + + IF + + N
Sbjct: 171 WQRALEVFEWL-NLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYN 229
Query: 494 AMLKVYSRNDMFSKAKELFEE-----------------TTRANSSGYT---------FLS 527
AM+ VYSR+ FSKA+EL + R S G T +
Sbjct: 230 AMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVR 289
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
G L+PD TY+++L A + E V++ M CQ D + ++ R G
Sbjct: 290 NSG--LRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 647
E F L G P + + +L + N EK + M F E +
Sbjct: 348 AAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 648 LF 649
+
Sbjct: 408 II 409
>gi|125586172|gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japonica Group]
Length = 523
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 21/260 (8%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN +L+A + +F+ LR +G+ P A +Y A++ + + G D E +M
Sbjct: 131 YNDILSALAMAGDHDSAVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMV 190
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G T+ +V + G++ A+ M G T Y L LC GR +
Sbjct: 191 ARGFRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLE 250
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAM 495
+A+ ++ K+K P TFT ++ G D+ IF +++ P I T NA+
Sbjct: 251 EALDLLNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNAL 310
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS----SMLEASATAH 551
L + + KA L E + G+ A PD ++S ++L A T+
Sbjct: 311 LNGHCKEGNPLKAYSLLME-----------MCGNAA-CPPDRISFSIVLQALLRAGETSA 358
Query: 552 QWEYFEYVYKGMALSGCQLD 571
W+ YK M +G + D
Sbjct: 359 AWQ----AYKRMERAGFEAD 374
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 114/300 (38%), Gaps = 42/300 (14%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M G T ++ L +G +AM V D + + + +++ Y L+ L
Sbjct: 189 MVARGFRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRT---YNSLIGGLCY 245
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI-ERMRQKPSKRI- 298
GR EAL + N + E PDI + V +VG E + + +R S I
Sbjct: 246 VGRLEEALDLLNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIF 305
Query: 299 -----KNMHRKNWDPV--------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
N H K +P+ PD + ++ VL A + + + + +K+
Sbjct: 306 TYNALLNGHCKEGNPLKAYSLLMEMCGNAACPPDRISFSIVLQALLRAGETSAAWQAYKR 365
Query: 340 LRKSGLKPSAATY-----GLAM-------------EVMLQSGKYDLVHEFFRKMAKSGEA 381
+ ++G + GL E + + G+ D +MA+ G A
Sbjct: 366 MERAGFEADGRALDTLARGLCRQCAANVAALADAREALARGGEVDAAVSLLGEMARRGYA 425
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 441
+ Y +VRA E G+ +A+ + + R V + + L L GRW DAM V
Sbjct: 426 LRKRAYTDVVRALCERGRARDALRVLALVIARDFVPGRNAFDALLGELARQGRWPDAMAV 485
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 29/248 (11%)
Query: 383 GALT---YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
GALT Y ++ A G + AVA R + GV A Y CLC G +A
Sbjct: 124 GALTVSDYNDILSALAMAGDHDSAVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAK 183
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKV 498
++++ + R +P TF+ ++ G + + +F M+ CEP I T N+++
Sbjct: 184 EALDEMVA-RGFRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGG 242
Query: 499 YSRNDMFSKAKEL---FEETTRANSSGYTF---LSG--------DGAP---------LKP 535
+A +L +E+ + YTF L G + P L P
Sbjct: 243 LCYVGRLEEALDLLNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSP 302
Query: 536 DEYTYSSMLEASAT-AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
+TY+++L + + + + + + C D+ + +L RAG+ A
Sbjct: 303 TIFTYNALLNGHCKEGNPLKAYSLLMEMCGNAACPPDRISFSIVLQALLRAGETSAAWQA 362
Query: 595 FDSLLEAG 602
+ + AG
Sbjct: 363 YKRMERAG 370
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 186/455 (40%), Gaps = 72/455 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G QA +LD + K D+ +++ L+ L + GR EAL F M
Sbjct: 5 VINGFCKAGQVDQAFELLDEMKERGVKMDV---LLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+C+ P++ Y++V L + + E ++L + M KR + H EPD++
Sbjct: 62 EECS--PNVITYNTVVNGLCKANRIDEGLELFDDME----KRYEASHG------CEPDVI 109
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y+ V++A + + + FK++R G P+ TY ++ + + + D + ++
Sbjct: 110 SYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQL 169
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG----VVGTASVYYEL------ 425
A+ Y +V F +GK +E + + +M+++G ++ ++ + L
Sbjct: 170 KGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 229
Query: 426 --AC-----------------------CLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFT 459
AC LC G+ +A +++E ++S P IT++
Sbjct: 230 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVES--KVTPDVITYS 287
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
+I G +D +F M H C P+ T +L +S + K++E F
Sbjct: 288 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEH---KKSREAFRVHEDM 344
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
++G+ P TY+ +++ A E +Y M Q D +A L
Sbjct: 345 VNAGFI----------PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPL 394
Query: 579 LVEASRA-----GKCHLLEHAFDSLLEAGEIPHPL 608
+ RA K L D+++ G I H L
Sbjct: 395 IQCLCRARRVDEAKEFLDVMEADNVVPNGAICHAL 429
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 155/391 (39%), Gaps = 72/391 (18%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT ++ KAG+ +A + + M E + D+ + ++ L + G + E ++ +
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKER-GVKMDVLLHSTLIQGLCRKGRIDEALEQFKS 59
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-----G 344
M ++ S P+++ YN V+N +++ +F + K G
Sbjct: 60 MGEECS----------------PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHG 103
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
+P +Y ++ + ++ + D +E+F++M G A +TY L+ + +++EA
Sbjct: 104 CEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAY 163
Query: 405 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 464
+ + ++ +V A +YY VV K R KP E
Sbjct: 164 SLLMQLKGEDMVPRA-MYYNA---------------VVNGFK--RQGKPSE--------- 196
Query: 465 SMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 523
C+ + HMK+ NI NAML +ND KA + FE ++
Sbjct: 197 ---------CLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK--- 244
Query: 524 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 583
KP+ TY+ + A + + + M S D ++ ++
Sbjct: 245 ----------KPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294
Query: 584 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+AG+ + F ++ IPHP+ F +L
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLL 325
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 119/306 (38%), Gaps = 38/306 (12%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L KAG+ EA RI M+E + PD+ Y S+ + G + + + RM
Sbjct: 258 LCKAGKVDEAYRILLEMVES-KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM------ 310
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+H P V + +L+ + + F V + + +G P TY + M+
Sbjct: 311 ---VHE------CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMD 361
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+ + + E + KM + A TY L++ +++EA + ME VV
Sbjct: 362 CVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 421
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKS------------------LRHSKPLEITFT 459
++ + L LC G +A V++ + L+ +P E T+
Sbjct: 422 NGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYV 481
Query: 460 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
++ S +D I+ F+ M C P + T ++ DM A +FE
Sbjct: 482 AVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMV-- 539
Query: 519 NSSGYT 524
++G+T
Sbjct: 540 -AAGFT 544
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 131/319 (41%), Gaps = 67/319 (21%)
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y ++ F + G++++A + M++RGV K+
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGV----------------------------KMD 33
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFS 506
L HS LI G ID+ + F+ M + C PN+ T N ++ + +
Sbjct: 34 VLLHST--------LIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRID 85
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE-YFEYVYKGMAL 565
+ ELF++ + + + +PD +YS++++A A + + +EY +K M
Sbjct: 86 EGLELFDDMEKRYEASHG--------CEPDVISYSTVIDALCKAQRVDKAYEY-FKRMRA 136
Query: 566 SGCQLDQTKHAWLLVEASRAGKCHL--LEHAFDSLLE-AGE--IPHPLFFTEMLIQAIVQ 620
GC + ++ L+ G C + ++ A+ L++ GE +P +++ ++ Q
Sbjct: 137 VGCAPNVVTYSSLI-----DGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQ 191
Query: 621 SNYEKAVALINAMAYAPFHITERQWT----ELFESNEDRISRDKLEKLLNALCNCNAASS 676
+ + L+ M F I + L++++E + E+LL +
Sbjct: 192 GKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK-------SGK 244
Query: 677 EITVSNLSRALHALCRSEK 695
+ V + A+H LC++ K
Sbjct: 245 KPNVVTYNVAVHGLCKAGK 263
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 34/238 (14%)
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
S L+ + +K K+ Y L+ L +A R EA ++M D N+ P+ A H++
Sbjct: 371 SALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEAD-NVVPNGAICHAL 429
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
L + G + E +++ + + EPD V
Sbjct: 430 VEVLCKQGEVDEACSVLDNVVEICKAG-------------EPDEAV-------------- 462
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
V +Q+ G++P ATY + + + D F KMA G A G +TY +L
Sbjct: 463 ----EVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLL 518
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ ++A M G A L+ CL + G +QD +LV ++I ++
Sbjct: 519 IGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG-YQD-LLVRQRIMTM 574
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 170/434 (39%), Gaps = 43/434 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVK 285
+ LL +A R EAL I + PD+ +Y + +L G+ G +L++
Sbjct: 147 IIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ V PD+V Y+ V++ +FK++ + G+
Sbjct: 207 MMAE----------------GGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGI 250
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
P TY + + ++ D F R+M G TY L+ + G+ EAV
Sbjct: 251 PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVR 310
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
+ M + ++ L LC G+ ++A V + + +++ P ++T ++
Sbjct: 311 VFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM-AMKGQNPNVFSYTIMLNGY 369
Query: 466 MDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANS 520
G + D +F M D P+I T N ++K Y+ M KA +F E + +
Sbjct: 370 ATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429
Query: 521 SGY-TFLSG-------DGA----------PLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
Y T ++ D A + PD+Y Y +++ T + +
Sbjct: 430 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISE 489
Query: 563 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 622
+ +G LD + ++ + G+ ++ FD + G P + ++ ++ +
Sbjct: 490 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGK 549
Query: 623 YEKAVALINAMAYA 636
EKA+ + +AM A
Sbjct: 550 MEKALRVFDAMVSA 563
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 165/414 (39%), Gaps = 58/414 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K + G +AM + + + K D+ + Y ++A L + G+ +A+ FN M+
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT---YRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D + PD AYH + G L + +LI + MH D+V
Sbjct: 457 -DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN------GMHL---------DIV 500
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+++++N + +F GL P+A Y + M+ GK + F M
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G + Y LV + + G+I+E ++ R M Q+G+ + +Y + +G +
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII-----DGLF 615
Query: 436 QDAMLVVEKIKSLRHSKPL----EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 490
+ V K+K ++ + T+ ++ D+ I +F+ ++ + + NI
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 675
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
T+N M+ + +AK+LF +R+ L P TYS M+
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLFASISRSG-------------LVPCVVTYSIMITNLIKE 722
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 604
E E ++ M +GC+ D LL H LL+ EI
Sbjct: 723 GLVEEAEDMFSSMQNAGCEPDS----------------RLLNHVVRELLKKNEI 760
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 176/454 (38%), Gaps = 45/454 (9%)
Query: 129 DDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMF 188
+ DV D F + V+ + + + + L R M K F+R M G++
Sbjct: 232 EGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC---KARAMD-KAEAFLRQMVNKGVLP 287
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
L+ G G W++A+ V ++ L + L+ L K G+ EA
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKE---MRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344
Query: 249 RIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
+F+ M ++ N P++ +Y + G L ++ L + M
Sbjct: 345 DVFDTMAMKGQN--PNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG------------- 389
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
+ PD+ +N ++ A +F ++R G+KP TY + + + GK D
Sbjct: 390 --IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
E F +M G A Y L++ F G + +A + + G+ + +
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHM-K 482
LC GR DA + + ++ P + ++ L MDG G ++ + +F M
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNV-GLHPTAVVYSML----MDGYCLVGKMEKALRVFDAMVS 562
Query: 483 DHCEPN---IGT-VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG----APLK 534
EPN GT VN K+ ++ S +E+ ++ + ++ Y + DG
Sbjct: 563 AGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII-DGLFEAGRTV 621
Query: 535 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
P + + M E+ ++ Y V +G+ + C
Sbjct: 622 PAKVKFHEMTESGIAMNKCTY-NIVLRGLFKNRC 654
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 128/324 (39%), Gaps = 25/324 (7%)
Query: 303 RKNWDPVLEPDLVVYNAVLN------ACVPSHQWKGVFWVFKQLRKSG---LKPSAATYG 353
++ PVLE DL + A L AC + R G L P++ TY
Sbjct: 56 QRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYA 115
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV-AAVRNMEQ 412
+ M+ ++ + +L FF ++ ++G + + L++ F E + +EA+ + +
Sbjct: 116 ILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPE 175
Query: 413 RGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
G V Y L LC+ G+ Q L+ + P + ++ +I G +
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDV 235
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 530
+ +F+ M + P+ T ++++ + KA+ +
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG----------- 284
Query: 531 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
+ P+ +TY++++ ++ QW+ V+K M D + L+ + GK
Sbjct: 285 --VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342
Query: 591 LEHAFDSLLEAGEIPHPLFFTEML 614
FD++ G+ P+ +T ML
Sbjct: 343 ARDVFDTMAMKGQNPNVFSYTIML 366
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 177/442 (40%), Gaps = 71/442 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G W++A +VL+ + D+ + YT L+ L K GR A+ + NLM+
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVT---YTGLIDGLCKDGRATHAMDLLNLMV 200
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E P Y+ + L + GL+ + K++ M +K K D+V
Sbjct: 201 EK-GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK---------------ADVV 244
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQL--RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
YN ++ + +F + ++ L+P+ T+ + + + + G+ + R
Sbjct: 245 TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 304
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
KM K G +TY +L+ + GKI EA+ + + G V + Y L +G
Sbjct: 305 KMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI-----DG 359
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
+ ML + K +F M+ H P +
Sbjct: 360 FCKMRMLNIAK-------------------------------GLFCEMRTHGLNPALFDY 388
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N ++ + +AK LF+E AN +PD ++++M++ + A
Sbjct: 389 NTLMASLCKEGSLEQAKSLFQEMGNANC-------------EPDIISFNTMIDGTLKAGD 435
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+++ + + M G + D + L+ S+ G+ + A + ++ +G P L +
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495
Query: 613 MLIQAIVQSNYEKAVALINAMA 634
+L + + + + L++ MA
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMA 517
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 110/550 (20%), Positives = 217/550 (39%), Gaps = 55/550 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+LKGL G +AM ++ + D+ S Y L+ L KA + EA+ + L +
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVS---YNTLINGLCKAKKLKEAVGLL-LEM 59
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------------------S 295
E +P+ ++ L + G + E ++L+E M++K
Sbjct: 60 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 119
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
R K + + + ++V Y+ +++ QWK V + + G+ P TY
Sbjct: 120 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 179
Query: 356 MEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV 415
++ + + G+ + M + GE +TY VL+ +EG + +A +R M ++G
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239
Query: 416 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDC 474
Y L LC+ G+ +A+ + + + +P TF LI G +
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299
Query: 475 ISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYTFLSG 528
+ I + M K C N+ T N +L + +A EL+++ NS Y+ L
Sbjct: 300 VKIHRKMVKKGSC-GNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI- 357
Query: 529 DGA-------------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
DG L P + Y++++ + E + +++ M + C+
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
D ++ +AG ++ ++E G P L F+ ++ + ++A +
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 477
Query: 630 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 689
+ M + F + L + S+ +++N L A + + +S L
Sbjct: 478 LERMVASGFTPDALVYDSLLKGLS---SKGDTTEIINLLHQMAAKGTVLDRKIVSTILTC 534
Query: 690 LCRSEKERDL 699
LC S +E D+
Sbjct: 535 LCHSIQEVDV 544
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 134/334 (40%), Gaps = 55/334 (16%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+ L + + +K +R+M + G L+KGL DKG +A+ + + ++
Sbjct: 213 VLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN 272
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRI---------------FNLMLEDC------ 258
++ + + F + L+ L K GR +A++I +N++L C
Sbjct: 273 ENCLE-PNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKI 331
Query: 259 -------------NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS------- 295
P+ Y + ++ +L L MR P+
Sbjct: 332 KEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 391
Query: 296 ----------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ K++ ++ + EPD++ +N +++ + + ++ V + ++ + GL
Sbjct: 392 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 451
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
+P A T+ + + + G+ D +M SG AL Y L++ +G E +
Sbjct: 452 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 511
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ M +G V + + CLC++ + D M
Sbjct: 512 LLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVM 545
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 138/333 (41%), Gaps = 39/333 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ L + GR EA+ + + M+ED L P+ Y ++ + ++G + L+ +M
Sbjct: 84 FTTLMNGLCREGRVVEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 142
Query: 291 RQ----KPSKRI-----------------KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
+ KP I +N+ + D + PD+V Y+ ++N S +
Sbjct: 143 EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGK 202
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
W + +++ + P T+ + +++ G + + ++M SG +T
Sbjct: 203 WSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNT 262
Query: 390 LVRAFWEEGKINEAVAAVRNMEQ-----------RGVVGTASVYYELACCLCNNGRWQDA 438
L+ + GK+ +A+ + M++ GV Y L L N G++ +A
Sbjct: 263 LLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEA 322
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLK 497
+ E++ R P +T++ +I +D+ +F M PNI T N ++
Sbjct: 323 EELYEEMPH-RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLIT 381
Query: 498 VYSRNDMFSKAKELFEETTR----ANSSGYTFL 526
Y + M ELF E R AN+ Y L
Sbjct: 382 GYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 133/306 (43%), Gaps = 5/306 (1%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P++V + ++N + + ++ + GL+P+ TYG ++ M + G
Sbjct: 78 KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 137
Query: 371 FFRKMAK-SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
RKM + S + Y ++ W++G+ +A M+ +G+ Y +
Sbjct: 138 LLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGF 197
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C++G+W +A +++++ +R P +TF+GLI + + G ++ + Q M PN
Sbjct: 198 CSSGKWSEAQRLLQEML-VRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T N +L + A E+F+ ++ + +G ++PD TY+ ++
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG--VEPDVQTYNILISGLI 314
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
++ E +Y+ M G D ++ ++ + + FDS+ P+ +
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374
Query: 609 FFTEML 614
F ++
Sbjct: 375 TFNTLI 380
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 144/360 (40%), Gaps = 38/360 (10%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+ +N ++ + F +L K G P+ T+ + + + + F
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M K +T+ L+ EG++ EAVA + M + G+ Y + +C
Sbjct: 74 HQMCKPN----VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
G A+ ++ K++ L H KP + ++ +I G D ++F M+D P+I T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 492 VNAMLKVYSRNDMFSKAKELFEET-TRANSSGYTFLSG-------DG------------- 530
+ M+ + + +S+A+ L +E R S SG +G
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 531 -APLKPDEYTYSSMLEASATAHQ----WEYFEYVYKGM-------ALSGCQLDQTKHAWL 578
+ + P+ T +++L+ + + E F+ + K M A +G + D + L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
+ GK E ++ + G +P + ++ M+ QS ++A + ++M F
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 101/230 (43%), Gaps = 8/230 (3%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G W +A +L + K D+ + ++ L+ L K G + A + M+
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVT---FSGLINALVKEGDLNSAQDLLQEMI 249
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P++ +++ L G LK+ +++ + M QK I H N +EPD+
Sbjct: 250 SS-GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM-QKSMMDIDATHAFNG---VEPDVQ 304
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +++ + ++ +++++ G+ P TY + + + + D + F M
Sbjct: 305 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM 364
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+ +T+ L+ + + G +++ + M +RG+V A Y L
Sbjct: 365 GSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 25/192 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLM---LEDCN-------LYPDIAAYHSVAVTLGQVGLLKEL 283
LL L +G+ +AL +F M + D + + PD+ Y+ + L G E
Sbjct: 263 LLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEA 322
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+L E M HR + PD V Y++++N + +F +
Sbjct: 323 EELYEEMP----------HRG-----IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
P+ T+ + ++G D E F +M + G A+TY L+R F + G IN +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427
Query: 404 VAAVRNMEQRGV 415
+ + M GV
Sbjct: 428 LDIFQEMISSGV 439
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 177/442 (40%), Gaps = 71/442 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G W++A +VL+ + D+ + YT L+ L K GR A+ + NLM+
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVT---YTGLIDGLCKDGRATHAMDLLNLMV 346
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E P Y+ + L + GL+ + K++ M +K K D+V
Sbjct: 347 EK-GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK---------------ADVV 390
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQL--RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
YN ++ + +F + ++ L+P+ T+ + + + + G+ + R
Sbjct: 391 TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 450
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
KM K G +TY +L+ + GKI EA+ + + G V + Y L +G
Sbjct: 451 KMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI-----DG 505
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
+ ML + K +F M+ H P +
Sbjct: 506 FCKMRMLNIAK-------------------------------GLFCEMRTHGLNPALFDY 534
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N ++ + +AK LF+E AN +PD ++++M++ + A
Sbjct: 535 NTLMASLCKEGSLEQAKSLFQEMGNANC-------------EPDIISFNTMIDGTLKAGD 581
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 612
+++ + + M G + D + L+ S+ G+ + A + ++ +G P L +
Sbjct: 582 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 641
Query: 613 MLIQAIVQSNYEKAVALINAMA 634
+L + + + + L++ MA
Sbjct: 642 LLKGLSSKGDTTEIINLLHQMA 663
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 114/589 (19%), Positives = 232/589 (39%), Gaps = 55/589 (9%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
++ L++ ++ + + V ++ + G M +LKGL G +AM ++ +
Sbjct: 111 SLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREM 170
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
D+ S Y L+ L KA + EA+ + L +E +P+ ++ L +
Sbjct: 171 GRKSVSPDIVS---YNTLINGLCKAKKLKEAVGLL-LEMEAAGCFPNSVTCTTLMDGLCK 226
Query: 277 VGLLKELVKLIERMRQKPSK--------------------RIKNMHRKNWDPVLEPDLVV 316
G + E ++L+E M++K R K + + + ++V
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 286
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
Y+ +++ QWK V + + G+ P TY ++ + + G+ + M
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 346
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
+ GE +TY VL+ +EG + +A +R M ++G Y L LC+ G+
Sbjct: 347 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 406
Query: 437 DAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVN 493
+A+ + + + +P TF LI G + + I + M K C N+ T N
Sbjct: 407 EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC-GNLVTYN 465
Query: 494 AMLKVYSRNDMFSKAKELFEETTR----ANSSGYTFLSGDGA------------------ 531
+L + +A EL+++ NS Y+ L DG
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI-DGFCKMRMLNIAKGLFCEMRT 524
Query: 532 -PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
L P + Y++++ + E + +++ M + C+ D ++ +AG
Sbjct: 525 HGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQF 584
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
++ ++E G P L F+ ++ + ++A + + M + F + L +
Sbjct: 585 VKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 644
Query: 651 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDL 699
S+ +++N L A + + +S L LC S +E D+
Sbjct: 645 GLS---SKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDV 690
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 150/410 (36%), Gaps = 62/410 (15%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
LVD L+ + R M ++ + G + L++ D + V+ GL
Sbjct: 80 LVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVV----GLV 135
Query: 221 DKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
KR + F+ +L L + G EA+ + M ++ PDI +Y+++ L +
Sbjct: 136 LKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK-SVSPDIVSYNTLINGLCKAKK 194
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
LKE V L+ M P+ V +++ + + +
Sbjct: 195 LKEAVGLLLEMEAAGC---------------FPNSVTCTTLMDGLCKDGRMDEAMELLEA 239
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++K G YG + +G D E F +M G + +TY LV G+
Sbjct: 240 MKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 299
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-------------------- 439
EA + M + G+ Y L LC +GR AM
Sbjct: 300 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 359
Query: 440 ---------LVVEKIKSLRH-----SKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-- 483
LV++ K LR K +T+ L+ D G +D+ + +F M D
Sbjct: 360 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 419
Query: 484 HC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG----YTFLSG 528
+C EPN+ T N ++ + +KA ++ + + S G Y L G
Sbjct: 420 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 469
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 134/334 (40%), Gaps = 55/334 (16%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+ L + + +K +R+M + G L+KGL DKG +A+ + + ++
Sbjct: 359 VLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN 418
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRI---------------FNLMLEDC------ 258
++ + + F + L+ L K GR +A++I +N++L C
Sbjct: 419 ENCLE-PNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKI 477
Query: 259 -------------NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS------- 295
P+ Y + ++ +L L MR P+
Sbjct: 478 KEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 537
Query: 296 ----------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ K++ ++ + EPD++ +N +++ + + ++ V + ++ + GL
Sbjct: 538 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 597
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
+P A T+ + + + G+ D +M SG AL Y L++ +G E +
Sbjct: 598 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 657
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ M +G V + + CLC++ + D M
Sbjct: 658 LLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVM 691
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 138/333 (41%), Gaps = 39/333 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ L + GR EA+ + + M+ED L P+ Y ++ + ++G + L+ +M
Sbjct: 84 FTTLMNGLCREGRVVEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 142
Query: 291 RQ----KPSKRI-----------------KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
+ KP I +N+ + D + PD+V Y+ ++N S +
Sbjct: 143 EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGK 202
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKV 389
W + +++ + P T+ + +++ G + + ++M SG +T
Sbjct: 203 WSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNT 262
Query: 390 LVRAFWEEGKINEAVAAVRNMEQ-----------RGVVGTASVYYELACCLCNNGRWQDA 438
L+ + GK+ +A+ + M++ GV Y L L N G++ +A
Sbjct: 263 LLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEA 322
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLK 497
+ E++ R P +T++ +I +D+ +F M PNI T N ++
Sbjct: 323 EELYEEMPH-RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLIT 381
Query: 498 VYSRNDMFSKAKELFEETTR----ANSSGYTFL 526
Y + M ELF E R AN+ Y L
Sbjct: 382 GYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 133/306 (43%), Gaps = 5/306 (1%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P++V + ++N + + ++ + GL+P+ TYG ++ M + G
Sbjct: 78 KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 137
Query: 371 FFRKMAK-SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
RKM + S + Y ++ W++G+ +A M+ +G+ Y +
Sbjct: 138 LLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGF 197
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C++G+W +A +++++ +R P +TF+GLI + + G ++ + Q M PN
Sbjct: 198 CSSGKWSEAQRLLQEML-VRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T N +L + A E+F+ ++ + +G ++PD TY+ ++
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG--VEPDVQTYNILISGLI 314
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
++ E +Y+ M G D ++ ++ + + FDS+ P+ +
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374
Query: 609 FFTEML 614
F ++
Sbjct: 375 TFNTLI 380
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 144/360 (40%), Gaps = 38/360 (10%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+ +N ++ + F +L K G P+ T+ + + + + F
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
+M K +T+ L+ EG++ EAVA + M + G+ Y + +C
Sbjct: 74 HQMCKPN----VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 491
G A+ ++ K++ L H KP + ++ +I G D ++F M+D P+I T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 492 VNAMLKVYSRNDMFSKAKELFEET-TRANSSGYTFLSG-------DG------------- 530
+ M+ + + +S+A+ L +E R S SG +G
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 531 -APLKPDEYTYSSMLEASATAHQ----WEYFEYVYKGM-------ALSGCQLDQTKHAWL 578
+ + P+ T +++L+ + + E F+ + K M A +G + D + L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 638
+ GK E ++ + G +P + ++ M+ QS ++A + ++M F
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 101/230 (43%), Gaps = 8/230 (3%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G W +A +L + K D+ + ++ L+ L K G + A + M+
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVT---FSGLINALVKEGDLNSAQDLLQEMI 249
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P++ +++ L G LK+ +++ + M QK I H N +EPD+
Sbjct: 250 SS-GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM-QKSMMDIDATHAFNG---VEPDVQ 304
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN +++ + ++ +++++ G+ P TY + + + + D + F M
Sbjct: 305 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM 364
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+ +T+ L+ + + G +++ + M +RG+V A Y L
Sbjct: 365 GSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 25/192 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLM---LEDCN-------LYPDIAAYHSVAVTLGQVGLLKEL 283
LL L +G+ +AL +F M + D + + PD+ Y+ + L G E
Sbjct: 263 LLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEA 322
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+L E M HR + PD V Y++++N + +F +
Sbjct: 323 EELYEEMP----------HRG-----IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 344 GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEA 403
P+ T+ + ++G D E F +M + G A+TY L+R F + G IN +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427
Query: 404 VAAVRNMEQRGV 415
+ + M GV
Sbjct: 428 LDIFQEMISSGV 439
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 129/311 (41%), Gaps = 28/311 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + G +AM+V Y +K S +Y L+ L K G +AL++ M+
Sbjct: 362 LINGLCNDGDMNRAMAVF---YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E C+ PDI Y+ V L ++G L + ++ K PD+
Sbjct: 419 EHGCS--PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI---------------PDI 461
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+N +++ + + G+ P TY + + ++ K D V + F+
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M + G +TY +L+ +F ++ K++EA+ + M+ RG+ L C LC+NG
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 435 WQDA---MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
A + +EK +S + F +I + ++ +F M C P+
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAI---FNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNY 638
Query: 491 TVNAMLKVYSR 501
T M+ Y +
Sbjct: 639 TYRVMIDSYCK 649
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 140/353 (39%), Gaps = 33/353 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ KL+ +L K G E+ ++F+ +++ + P++ ++ L + G + E +L+E
Sbjct: 217 LTFNKLIHVLCKKGNVQESEKLFSKVMKR-GVCPNLFTFNIFIQGLCRKGAIDEAARLLE 275
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+ + L PD++ YN ++ + ++ SG++P+
Sbjct: 276 SIVSEG---------------LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + ++G + R G TY L+ +G +N A+A
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-D 467
++G + +Y L L G A+ +++ + + H +I L+++ +
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM--MEHGCSPDIWTYNLVVNGLCK 438
Query: 468 GGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G + D I + C P+I T N ++ Y + KA E+ + T L
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD----------TML 488
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
S + PD TY+++L A + + +K M GC + + L+
Sbjct: 489 S---HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 103/516 (19%), Positives = 205/516 (39%), Gaps = 61/516 (11%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDL-KSRFVYTKLLAILGKAGRPHEALRIFNL 253
KL+ L KG+ +++ + V KR + + F + + L + G EA R+
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVM----KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM--------- 301
++ + L PD+ +Y+++ + L E + +M +P++ N
Sbjct: 277 IVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG 335
Query: 302 HRKNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+N D +L PD Y++++N VF + + G K S Y
Sbjct: 336 MMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYN 395
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
++ + + G + + M + G + TY ++V + G +++A + + +
Sbjct: 396 TLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK 455
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHID 472
G + + L C A+ +++ + L H P IT+ L+ +D
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM--LSHGITPDVITYNTLLNGLCKARKLD 513
Query: 473 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET-TRANS----SGYTFL 526
+ + F+ M + C PNI T N +++ + ++ S+A ELF+E TR + + T +
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 527 SGDGAPLKPD-------------EYTYSS-----MLEASATAHQWEYFEYVYKGMALSGC 568
G + + D +++YS+ M+ A E ++ M S C
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDC 633
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEMLIQAIVQSNYEK 625
D + ++ + G L H F LLE G +P ++L V +
Sbjct: 634 APDNYTYRVMIDSYCKTGNID-LAHTF--LLENISKGLVPSFTTCGKVLNCLCVTHRLSE 690
Query: 626 AVALINAMAYAPFHITERQWTELFESNEDRISRDKL 661
AV +IN M I + +FE+++ ++ K+
Sbjct: 691 AVVIINLMVQNG--IVPEEVNSIFEADKKEVAAPKI 724
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/355 (17%), Positives = 137/355 (38%), Gaps = 31/355 (8%)
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y + G+ G ++E V + ERM +D EP + YNA++N
Sbjct: 77 GVYIGIMRDYGRKGKVQEAVNVFERM-------------DFYD--CEPSVQSYNAIMNIL 121
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
V + V+ +++ G+ P T+ + M+ +G+ M G A
Sbjct: 122 VEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNA 181
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
++Y ++ F++E EA M ++G+ + +L LC G Q++ + K
Sbjct: 182 VSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSK 241
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRND 503
+ R P TF I G ID+ + + + + P++ + N ++ + ++
Sbjct: 242 VMK-RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHS 300
Query: 504 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 563
+A+ + + ++P+E+TY++++ A + + + +
Sbjct: 301 KLVEAECYLHKMVNSG-------------VEPNEFTYNTIINGFCKAGMMQNADKILRDA 347
Query: 564 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 618
G D+ ++ L+ G + F +E G H + L++ +
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG-FKHSIILYNTLVKGL 401
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 154/408 (37%), Gaps = 70/408 (17%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKR-DLKSRFVYTK 233
+ +R M+ G+ + +L+GL G QA+ D L + D+ S YT
Sbjct: 45 FSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVS---YTT 101
Query: 234 LLAILGKAGRPHEALRIFNLMLE--DC--------------------------------- 258
L+ L K GR A +F M+ C
Sbjct: 102 LINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKR 161
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
+ PD+ Y+++ L Q+G + E + +M ++ P LV +N
Sbjct: 162 DFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG---------------YVPTLVSFN 206
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
A++ + + VF ++ P+ TY + ++ + +S + D + +M
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 266
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G + Y LV F G+++ A+ +R M +G + Y + LC GR DA
Sbjct: 267 GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 326
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKV 498
+ ++ + + S P +T++ LI +D+ + + M C PN+ T N M+
Sbjct: 327 HEIFRELVANKCS-PNVVTYSALIGGYCRASRVDEGGKVMREMA--CRPNVVTYNTMIWG 383
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
S D +A +F E + G+ PD TY + A
Sbjct: 384 LSMVDRNEEAYGMFREMS---ECGFV----------PDARTYRGLKRA 418
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/373 (19%), Positives = 140/373 (37%), Gaps = 32/373 (8%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L L + GR +AL F+ LE + PD+ +Y ++ L ++G + L +M
Sbjct: 66 ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 125
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
R P+ YNA+++ + V + RK P TY
Sbjct: 126 GGCR--------------PNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYN 171
Query: 354 LAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR 413
M + Q G+ D F +M + G +++ ++ ++ +A+ M R
Sbjct: 172 TLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR 231
Query: 414 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 473
Y + LC + + +A +++++ S +P + +T L++ G +D
Sbjct: 232 DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS-EGCRPDLVAYTPLVLGFSAAGRLDS 290
Query: 474 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 532
+ + + M C P++ T ++ + A E+F E S
Sbjct: 291 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCS----------- 339
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
P+ TYS+++ A + + V + MA + W L R + + +
Sbjct: 340 --PNVVTYSALIGGYCRASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGM- 396
Query: 593 HAFDSLLEAGEIP 605
F + E G +P
Sbjct: 397 --FREMSECGFVP 407
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/340 (18%), Positives = 137/340 (40%), Gaps = 19/340 (5%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG-LKPSAATYGLAMEVMLQSGKYDLVH 369
+PD+V Y ++N + F +F+++ +G +P+A TY ++ + + + D
Sbjct: 93 QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 152
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ K A +TY L+ A ++ G+++EA+A M + G V T + + L
Sbjct: 153 AVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 212
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
C R DA+ V ++ R P +T++ +I +D+ + M + C P+
Sbjct: 213 CRARRLADALEVFNEMID-RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPD 271
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ ++ +S A L R S G PD TY+ +++
Sbjct: 272 LVAYTPLVLGFSAAGRLDSALGLLR---RMVSQGCI----------PDVVTYTVVIDKLC 318
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
+ + +++ + + C + ++ L+ RA + ++ + E P+ +
Sbjct: 319 KVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR---VDEGGKVMREMACRPNVV 375
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 648
+ M+ + E+A + M+ F R + L
Sbjct: 376 TYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 359 MLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 418
M+++G ++ + FR+ A ++TY VL+R F ++ A + +R M+ G+
Sbjct: 1 MVRAGSHNQALQLFRENPCQLPA-SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59
Query: 419 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 478
+ LC GR A+ + L H++P +++T LI G +D +F
Sbjct: 60 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119
Query: 479 QHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
+ M C PN T NA++ + D A+ + E + + PD
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRD-------------FAPD 166
Query: 537 EYTYSSMLEA 546
TY++++ A
Sbjct: 167 VVTYNTLMAA 176
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 142/334 (42%), Gaps = 20/334 (5%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R EA L+ L + T+ V R M + M LLKGL D+
Sbjct: 123 KKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 182
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + YT ++ K G +A ++ ML D + P++
Sbjct: 183 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML-DRRISPNVVT 241
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ L + + + ++++ M +KN + PD + YN++L+
Sbjct: 242 YSSIIAALCKAQAMDKAMEVLNTM-------VKNG--------VMPDCMTYNSILHGYCS 286
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
S Q K K++R G++P+ TY M + ++G+ + F M K G T
Sbjct: 287 SGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIAT 346
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y+ L++ + +G + E A + M + G+ V+ L C + AMLV K++
Sbjct: 347 YRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 406
Query: 447 SLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQ 479
+H + G +I + G +DD + F+
Sbjct: 407 --QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 438
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 117/286 (40%), Gaps = 20/286 (6%)
Query: 336 VFKQLRKSG---LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+F ++ ++G + P TY + + ++G+ DL + K G + A+T+ L++
Sbjct: 79 LFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLK 138
Query: 393 AFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-- 449
+ + ++A+ V R M + + L LC+ R Q+A+ ++ + R
Sbjct: 139 GLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGG 198
Query: 450 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA 508
S P +++T +I G D S + M D PN+ T ++++ + KA
Sbjct: 199 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKA 258
Query: 509 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 568
E+ + + PD TY+S+L ++ Q + K M G
Sbjct: 259 MEVLNTMVKNG-------------VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 305
Query: 569 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + + L+ + G+C FDS+ + G P + +L
Sbjct: 306 EPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLL 351
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 123/286 (43%), Gaps = 18/286 (6%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ L+ +AG+ A+R+ LM +D PDI + L G + + ++ ERM
Sbjct: 164 FAHLMLSYSRAGKLRSAMRVLQLMQKD-GCAPDICICNMAVNVLVVAGRIDKALEFAERM 222
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R+ ++PD+V YN ++ + + + + ++G P
Sbjct: 223 RRVG---------------VDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKI 267
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+Y M + + + V +M+ +G +TY +L+ + G +EA++ +R
Sbjct: 268 SYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRES 327
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
E + Y C NGR +A ++ ++ S + +P +T++ ++ G
Sbjct: 328 EGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMIS-KGCRPDVVTYSAVVDGFCRIGE 386
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+D + +HM K+ C+PN T A+L + S+A EL ++
Sbjct: 387 LDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKS 432
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 17/261 (6%)
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYK 388
+ + V + ++K G P +A+ V++ +G+ D EF +M + G +TY
Sbjct: 176 KLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYN 235
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L++ +I +A+ + +M Q G + Y+ + LC R D ++E++ S
Sbjct: 236 CLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERM-SD 294
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFS 506
P ++T+ LI GH D+ +S + K +G +A + + N +
Sbjct: 295 AGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVG-YSATVHSFCLNGRMA 353
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+AKE+ E S G +PD TYS++++ + + + K M +
Sbjct: 354 EAKEIIGEMI---SKG----------CRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKN 400
Query: 567 GCQLDQTKHAWLLVEASRAGK 587
GC+ + H LL + GK
Sbjct: 401 GCKPNTVTHTALLNGLCKVGK 421
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 122/309 (39%), Gaps = 31/309 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL R+ + L+ + + L + Y +++ L K R + + M
Sbjct: 237 LIKGLC---GARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERM- 292
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK--------NMHRKNWD 307
D ++PD Y+ + L + G E + +R+ KR + +H +
Sbjct: 293 SDAGIFPDQVTYNMLIHGLAKHGHADEALSF---LRESEGKRFRVDEVGYSATVHSFCLN 349
Query: 308 PVL---------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ PD+V Y+AV++ + + K + K+G KP+ T+
Sbjct: 350 GRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTH 409
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
+ + + GK E K + A+TY V++ F EGK+ E+ V M Q
Sbjct: 410 TALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQ 469
Query: 413 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 472
+G T L LCN + DA +E+ +S + + FT +I G ++
Sbjct: 470 KGFFPTTVEINLLIHALCNERKPADAKDFMEQCQS-KGCFINVVNFTTVIHGFSRQGDLE 528
Query: 473 DCISIFQHM 481
+S+ M
Sbjct: 529 SALSLLDDM 537
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 166/412 (40%), Gaps = 49/412 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
++P++VVY+ +L S +W+ V VF+ + + G+KP + ++ + + GK
Sbjct: 189 VQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAA 248
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ M + G +TY VL+ + +EG + EA+ + M+ +GV Y L L
Sbjct: 249 KVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGL 308
Query: 430 CNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 487
+AM +E+ I+ +P +TF +I G + + + + M + C
Sbjct: 309 SGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMC 368
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
N+ T N ++ + R A L +E +SG L+PD +TYS ++
Sbjct: 369 NLVTYNYLIGGFLRVHKVKMAMNLMDELA---------ISG----LEPDSFTYSILINGF 415
Query: 548 A-------------TAHQ----WEYFEYV------------YKGMAL-----SGCQLDQT 573
+ T Q E F Y+ + M L C LD
Sbjct: 416 SKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAI 475
Query: 574 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
++ ++ A ++G ++ +L+ G P + ++ ++ + E+A ++ M
Sbjct: 476 AYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQM 535
Query: 634 AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSR 685
+ F + L + DK+ KL++ + N A +S + R
Sbjct: 536 TASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 162/397 (40%), Gaps = 42/397 (10%)
Query: 234 LLAILGKAGRPHEALRIFNLML------EDCNLY---PDI---AAYHSVAVTLGQVGLLK 281
LA+L + GR +A + N L E C+L PD+ +Y++V L + G
Sbjct: 42 FLAVLFRRGRA-DAAALLNRRLRGAPVTEACSLLSALPDVRDAVSYNTVLAALCRRG--- 97
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+ +RQ S + +M R+ P P+ V Y V+ S + + + ++
Sbjct: 98 -----GDHLRQARSLLV-DMSREAH-PAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQ 150
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
SG++ TYG + + + + D E +M SG + Y L+R + G+
Sbjct: 151 ASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQ 210
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE---ITF 458
+ +M +RG+ ++ L LC G+ A K+K + + LE +T+
Sbjct: 211 DVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKA----AKVKDMMVQRGLEPNVVTY 266
Query: 459 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
LI S G + + +++ + M D P++ T N ++ S +A EE
Sbjct: 267 NVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEE--- 323
Query: 518 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 577
+ GD ++PD T++S++ + V + MA GC + + +
Sbjct: 324 -------MIQGDTV-VEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNY 375
Query: 578 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
L+ R K + + D L +G P ++ ++
Sbjct: 376 LIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILI 412
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 156/371 (42%), Gaps = 40/371 (10%)
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRP 244
+MFT L+ L +G +A V D + +R L+ V Y L+ L K G
Sbjct: 229 IMFT-----GLIDDLCKEGKTGKAAKVKDMMV----QRGLEPNVVTYNVLINSLCKEGSV 279
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
EAL + M +D + PD+ Y+++ L V + E + +E M Q
Sbjct: 280 REALTLRKEM-DDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQ------------ 326
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK 364
D V+EPD+V +N+V++ + V + + + G + TY + L+ K
Sbjct: 327 -GDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHK 385
Query: 365 YDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 424
+ ++A SG + TY +L+ F + +++ A + M QRG+ Y
Sbjct: 386 VKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIP 445
Query: 425 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 484
L +C G + AM + ++ ++ I ++ +I + G + + Q M D
Sbjct: 446 LLAAMCQQGMMERAMGLFNEMD--KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDE 503
Query: 485 -CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 543
P+ T + ++ +Y++ +A+ + ++ T +SG+ PD + S+
Sbjct: 504 GLAPDAVTYSMLINMYAKLGDLEEAERVLKQMT---ASGFV----------PDVAVFDSL 550
Query: 544 LEASATAHQWE 554
++ + Q +
Sbjct: 551 IKGYSAEGQTD 561
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 121/324 (37%), Gaps = 66/324 (20%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + T K K +M Q GL L+ L +GS R+A+++ +
Sbjct: 234 LIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKE---MD 290
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGL 279
DK Y L+A L EA+ M++ D + PD+ ++SV L ++G
Sbjct: 291 DKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGR 350
Query: 280 LKELVKLIERMRQKPS--------------------KRIKNMHRKNWDPVLEPDLVVYNA 319
+ + VK+ E M ++ K N+ + LEPD Y+
Sbjct: 351 MTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSI 410
Query: 320 VLNACVPSHQW--------------KGV-----------------------FWVFKQLRK 342
++N S W +G+ +F ++ K
Sbjct: 411 LINGF--SKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK 468
Query: 343 S-GLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
+ GL A Y + +SG V + + M G A A+TY +L+ + + G +
Sbjct: 469 NCGL--DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLE 526
Query: 402 EAVAAVRNMEQRGVVGTASVYYEL 425
EA ++ M G V +V+ L
Sbjct: 527 EAERVLKQMTASGFVPDVAVFDSL 550
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 139/321 (43%), Gaps = 21/321 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+P + N ++ + V + + V+ FKQ+ S + P+ +++ + + V+ GK
Sbjct: 136 FKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAV 195
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
M ++G ++Y L+ ++G+ A+ + +ME +G+ Y L
Sbjct: 196 NILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSL 255
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 488
C N R LV++K+++ + P E+++ LI + G I +F M + + PN
Sbjct: 256 CRNSRSAQGYLVLKKMRN-KMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPN 314
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ T N ++ Y N F +A L + AN ++P+E T ++L
Sbjct: 315 LITYNILINGYCINGNFEEALRLL-DVMEAND------------VRPNEVTIGTLLNGLY 361
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIP 605
+ +++ + + +++ L+ H ++ R G LL+ AF L+E G P
Sbjct: 362 KSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNG---LLDEAFQLLIEMCKDGVYP 418
Query: 606 HPLFFTEMLIQAIVQSNYEKA 626
+ F+ ++ N KA
Sbjct: 419 DIITFSVLINGFCKVGNLNKA 439
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 156/383 (40%), Gaps = 35/383 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ L+++L G+ +A+ I +M E P I +Y+++ + G K + LI M
Sbjct: 178 FNILISVLCVQGKLKKAVNILTMM-ERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHM 236
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSA 349
K ++ D+ YN +++ C S +G + V K++R + P+
Sbjct: 237 ECKG---------------IQADVCTYNMFIDSLCRNSRSAQG-YLVLKKMRNKMITPNE 280
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
+Y + ++ GK + F +M + + +TY +L+ + G EA+ +
Sbjct: 281 VSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDV 340
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
ME V L L + ++ A ++E+ S+ + I+ T +I G
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILER-YSINRTSLNCISHTVMIDGLCRNG 399
Query: 470 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+D+ + M KD P+I T + ++ + + +KAKE+ + R G+
Sbjct: 400 LLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYR---EGFV---- 452
Query: 529 DGAPLKPDEYTYSSMLEASA-TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
P+ +S+++ S + +E ++ Y M L+G D L+ GK
Sbjct: 453 ------PNNVIFSTLIYNSCKVGNVYEGMKF-YAAMNLNGQNADNFTCNSLVASLCENGK 505
Query: 588 CHLLEHAFDSLLEAGEIPHPLFF 610
E + G +P+ + F
Sbjct: 506 LVEAEEFLHHISRIGLVPNSVTF 528
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 149/372 (40%), Gaps = 53/372 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L P+L+ YN ++N + ++ + + + ++P+ T G + + +S K+D+
Sbjct: 311 LSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVAR 370
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ + + ++ +++ V++ G ++EA + M + GV + L
Sbjct: 371 NILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGF 430
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 489
C G A V+ KI P + F+ LI +S G+ +++ MK + N+
Sbjct: 431 CKVGNLNKAKEVMSKIYR-EGFVPNNVIFSTLIYNSCKVGN------VYEGMKFYAAMNL 483
Query: 490 G-------TVNAMLKVYSRNDMFSKAKELFEETTRA----NS-------SGYTFLSGDGA 531
T N+++ N +A+E +R NS +GY + GDG+
Sbjct: 484 NGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANV-GDGS 542
Query: 532 PL------------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
P +TY S+L+ + + K + +D + L+
Sbjct: 543 GAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLI 602
Query: 580 VEASRAGKCHLLEHA--FDSLLEAGEIPHPLFFTEMLIQAIVQSNY-----------EKA 626
VE S++G +LLE F+ +++ +P +T +L I + +K
Sbjct: 603 VEISKSG--NLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKE 660
Query: 627 VALINAMAYAPF 638
+ +N++ Y F
Sbjct: 661 ILTLNSIVYTCF 672
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 148/385 (38%), Gaps = 27/385 (7%)
Query: 140 AKNV-EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLK 198
A+N+ E + R + V++D L + + ++ + M + G+ L+
Sbjct: 369 ARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLIN 428
Query: 199 GLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-L 255
G G+ +A V+ +Y G + S +Y K G +E ++ + M L
Sbjct: 429 GFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSC-----KVGNVYEGMKFYAAMNL 483
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
N D +S+ +L + G L E + + + RI L P+ V
Sbjct: 484 NGQN--ADNFTCNSLVASLCENGKLVEAEEFLHHI-----SRIG----------LVPNSV 526
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
++ ++N G F VF ++ G PS TYG ++V+ + + + +K+
Sbjct: 527 TFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL 586
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
A+ ++Y L+ + G + EAV M Q ++ + Y + L GR
Sbjct: 587 HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRL 646
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
A + + ++ I +T I G + +F+ M++ ++ +N+
Sbjct: 647 VCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNS 706
Query: 495 MLKVYSRNDMFSKAKELFEETTRAN 519
+ YSR A L +T N
Sbjct: 707 ITDGYSRMGKVFSASSLISKTRNKN 731
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VYT + L KAG+ AL +F M E+ L D+ A +S+ ++G + LI +
Sbjct: 668 VYTCFIDGLFKAGQSKAALYLFKEM-EEKGLSLDLIALNSITDGYSRMGKVFSASSLISK 726
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
R K + P+L +N +L+ F ++ +R+SG P+
Sbjct: 727 TRNKN---------------VIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNR 771
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + G +L + + I LT+ +L+R E +++ + N
Sbjct: 772 LTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHN 831
Query: 410 ME 411
ME
Sbjct: 832 ME 833
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 137/317 (43%), Gaps = 30/317 (9%)
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
++A +++ + G++G+++EL+ + +M++ +EP L YN ++N
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENG---------------IEPTLYTYNFLMNG 231
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
V + VF+ + +KP TY ++ ++G+ E R M G
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+TY +++A + + VA + M+++G+ + + LC G+ + V E
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 351
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 502
+ + SKP +T LI G ++D I + M D +P++ T + ++ +N
Sbjct: 352 NMIR-KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 410
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+A + F T R DG L + YSS+++ A + + E +++
Sbjct: 411 GRVEEALDYFH-TCRF----------DG--LAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 563 MALSGCQLDQTKHAWLL 579
M+ GC D + L+
Sbjct: 458 MSEKGCTRDSYCYNALI 474
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 121/563 (21%), Positives = 228/563 (40%), Gaps = 80/563 (14%)
Query: 74 AKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVL-DDDV 132
KS L+ PW + ++ S S E D R+ L +L F +++VL D++
Sbjct: 74 VKSNRNLLPSPW--VSQILNLLDGSASMESNLDGFCRKFLIKLSPNF---VSFVLKSDEI 128
Query: 133 QLGSDYFAKNVEW-HPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMF--- 188
+ D W +K++ E LVD L+ AK+ +R ++ F
Sbjct: 129 REKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLA----LAKDVDRIRFVSSEIKKFEFP 184
Query: 189 -TEGQMLKLLKGLGDKGSWRQAMSVLDWVY-GLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
T L+K G G + + WV+ +K+ + + Y L+ L A
Sbjct: 185 MTVSAANALIKSFGKLGMVEELL----WVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS 240
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A R+F +M E + PDI Y+++ + G QK +++++M +
Sbjct: 241 AERVFEVM-ESGRIKPDIVTYNTMIKGYCKAG-----------QTQKAMEKLRDMETRGH 288
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
E D + Y ++ AC + +++++ + G++ + L + + + GK +
Sbjct: 289 ----EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLN 344
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ F M + G Y VL+ + + G + +A+ + M G Y +
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 404
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM------DG----GHIDDCIS 476
LC NGR ++A+ + F GL I+SM DG G +D+
Sbjct: 405 NGLCKNGRVEEALDYFHTCR-----------FDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF---EETTRANSSGYTF---LSGD 529
+F+ M + C + NA++ ++++ +A LF EE + + YT+ LSG
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 513
Query: 530 GAPLKPDEY--TYSSMLEASATAHQWEYFEYVYKGMALSG-----CQ-LDQTKHAWLLVE 581
+ +E + M++ T F + G+ LSG C+ LD+ ++++
Sbjct: 514 FKEHRNEEALKLWDMMIDKGITPTA-ACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 582 ASRAGKCHLLEHAFDSLLEAGEI 604
A+ E ++L +AG I
Sbjct: 573 AA-------CEDMINTLCKAGRI 588
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 21/220 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLK-DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
++ GL G +A LD+ + + D + S F Y+ L+ LGKAGR EA R+F M
Sbjct: 403 VVNGLCKNGRVEEA---LDYFHTCRFDGLAINSMF-YSSLIDGLGKAGRVDEAERLFEEM 458
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E D Y+++ + + E + L +RM ++ + +
Sbjct: 459 SEK-GCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG--------------CDQTV 503
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y +L+ H+ + ++ + G+ P+AA + + SGK + +
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+A G + A + ++ + G+I EA + +RG
Sbjct: 564 LAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERG 602
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 159/418 (38%), Gaps = 69/418 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y LL L K + + ++F ++ L+ CN PD Y + G++G +E + L
Sbjct: 270 FAYNMLLDALAKDEQLDRSYKVFKDMKLKHCN--PDEYTYTIMIRMTGKMGRAEESLALF 327
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M K P+L+ YN ++ A S +F + K+ +P
Sbjct: 328 EEMLTKGCT---------------PNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRP 372
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + + V++ G+ + E + S + I Y LVR + G +EA
Sbjct: 373 NEFTYSIILNVLVAEGQLGRLDEV---LEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLF 429
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI---------------------- 445
NM G Y + LC G+ +A+ ++ K+
Sbjct: 430 CNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKL 489
Query: 446 ----------KSLRHSKPLEITFT-GLIISSMDG-GHIDDCISIFQHMKDH-CEPNIGTV 492
+ ++ P FT ++ISS+ G + + + +F+ ++ C+P+I +
Sbjct: 490 KQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISY 549
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N+++ +N +A FL L PD TYS+++E +
Sbjct: 550 NSLINCLGKNGDVDEAH-------------MRFLEMQDKGLNPDVVTYSTLIECFGKTDK 596
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
E ++ M GC + + LL RAG+ + L E G P + +
Sbjct: 597 VEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITY 654
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 19/229 (8%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+ +L+ L G +A+ +L V+ +K +Y +L+ LGK + ++
Sbjct: 445 ISMLESLCRGGKTVEAIELLSKVH---EKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 501
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M +D +PDI Y+ + +LG+VG +KE V++ E + K PD
Sbjct: 502 MKQD-GPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCK---------------PD 545
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
++ YN+++N + F +++ GL P TY +E ++ K ++ F
Sbjct: 546 IISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFD 605
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+M G +TY +L+ G+ E V + ++G+ + Y
Sbjct: 606 RMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITY 654
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 20/266 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L G +A + ++ D D R Y +L L + G+ EA+ + + +
Sbjct: 412 LVRTLSKLGHSSEAHRLFCNMWSFHDGGD---RDAYISMLESLCRGGKTVEAIELLSKVH 468
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + D Y++V TLG++ + L L E+M+Q P PD+
Sbjct: 469 EK-GISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQD-------------GPF--PDIF 512
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++++ + K VF++L S KP +Y + + ++G D H F +M
Sbjct: 513 TYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEM 572
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +TY L+ F + K+ A + M +G Y L CL GR
Sbjct: 573 QDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRT 632
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGL 461
+ + + K++ + P IT+ L
Sbjct: 633 AETVDLYAKLRE-QGLTPDSITYAIL 657
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 16/193 (8%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L G +Q + D +K F Y L++ LG+ G+ EA+ +F LE +
Sbjct: 483 LSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFE-ELESSD 541
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
PDI +Y+S+ LG+ G + E R M K L PD+V Y+
Sbjct: 542 CKPDIISYNSLINCLGKNGDVDE-----------AHMRFLEMQDKG----LNPDVVTYST 586
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ + + + +F ++ G P+ TY + ++ + ++G+ + + K+ + G
Sbjct: 587 LIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQG 646
Query: 380 EAIGALTYKVLVR 392
++TY +L R
Sbjct: 647 LTPDSITYAILDR 659
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 55/121 (45%)
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+R + S R N++ + W + D+ YN +L+A Q + VFK ++ P
Sbjct: 245 IRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDE 304
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + + G+ + F +M G + Y +++A + G +++A+ N
Sbjct: 305 YTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCN 364
Query: 410 M 410
M
Sbjct: 365 M 365
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 22/184 (11%)
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-TTRANSSGYTFL-- 526
ID I M +D I TVN ++K++S N+ L ++ R N+ Y L
Sbjct: 183 IDQVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQ 242
Query: 527 ------SGDGA----------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
D A + D + Y+ +L+A A Q + V+K M L C
Sbjct: 243 AHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNP 302
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVAL 629
D+ + ++ + G+ F+ +L G P+ + + M IQA+ +S +KA+ L
Sbjct: 303 DEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTM-IQALSKSGMVDKAILL 361
Query: 630 INAM 633
M
Sbjct: 362 FCNM 365
>gi|3152594|gb|AAC17075.1| Contains repeats similar to RECA protein gb|L26100 from
Acinetobacter calcoaceticus [Arabidopsis thaliana]
Length = 566
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 17/250 (6%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T+LL L KA R +A+R+ LM+ + PD +AY + L + G + ++L+E+M
Sbjct: 100 TQLLYDLCKANRLKKAIRVIELMVSS-GIIPDASAYTYLVNQLCKRGNVGYAMQLVEKME 158
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
D + V YNA++ ++L + GL P+A T
Sbjct: 159 ---------------DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 203
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y +E + D + ++ G ++Y VL+ F +EG+ ++A+A R +
Sbjct: 204 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 263
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+G Y L CLC +GRW++A ++ ++ + P +T+ LI S G
Sbjct: 264 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRA-PSVVTYNILINSLAFHGRT 322
Query: 472 DDCISIFQHM 481
+ + + + M
Sbjct: 323 EQALQVLKEM 332
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 140/342 (40%), Gaps = 44/342 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L K G A+++ M ED + Y+++ L +G L + ++ +ER+
Sbjct: 134 YTYLVNQLCKRGNVGYAMQLVEKM-EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 192
Query: 291 RQK---PS-------------KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQW 330
QK P+ +R + K D ++ EP+LV YN +L +
Sbjct: 193 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 252
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+F++L G K + +Y + + + G+++ + +M A +TY +L
Sbjct: 253 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNIL 312
Query: 391 VRAFWEEGKINEAVAAVRNMEQRG--VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ + G+ +A+ ++ M + TA+ Y + LC G+ LVV+ + +
Sbjct: 313 INSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVD---LVVKCLDEM 369
Query: 449 --RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDM 504
R KP E T+ + + + I Q + K C + + + + + +
Sbjct: 370 IYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNT 429
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
F+ A +L E TR PD +TYS+++
Sbjct: 430 FA-AFQLLYEMTRCG-------------FDPDAHTYSALIRG 457
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 118/293 (40%), Gaps = 19/293 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P++ +L +++ K V + + SG+ P A+ Y + + + G +
Sbjct: 93 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 152
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY-YELACCL 429
KM G +TY LVR G +N+++ V + Q+G+ A Y + L
Sbjct: 153 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 212
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
G + L+ E I ++ +P +++ L+ G DD +++F+ + + N
Sbjct: 213 KERGTDEAVKLLDEII--VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 270
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + N +L+ + + +A L E DG P TY+ ++ + A
Sbjct: 271 VVSYNILLRCLCCDGRWEEANSLLAEM-------------DGGDRAPSVVTYNILINSLA 317
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAW--LLVEASRAGKCHLLEHAFDSLL 599
+ E V K M+ Q T ++ ++ + GK L+ D ++
Sbjct: 318 FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 370
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 157/422 (37%), Gaps = 68/422 (16%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A A LV++L +R + V M G L++GL GS Q+ L
Sbjct: 130 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQS---L 186
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+V L K + F Y+ LL K EA+++ + ++ P++ +Y+ +
Sbjct: 187 QFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG-EPNLVSYNVLLTG 245
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIK-NMHRKN-----------WDPV-----------L 310
+ G + + L R+ P+K K N+ N W+
Sbjct: 246 FCKEGRTDDAMALF---RELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDR 302
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG--LKPSAATYGLAMEVMLQSGKYDLV 368
P +V YN ++N+ + + V K++ K + +A +Y + + + GK DLV
Sbjct: 303 APSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLV 362
Query: 369 ----HEFFRKMAKSGE----AIGALT---------------------------YKVLVRA 393
E + K E AIG+L YK ++ +
Sbjct: 363 VKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITS 422
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+G A + M + G A Y L LC G + AM V+ ++ + KP
Sbjct: 423 LCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKP 482
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELF 512
F +I+ D + +F+ M + PN T +++ + D AKE+
Sbjct: 483 TVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 542
Query: 513 EE 514
+E
Sbjct: 543 DE 544
>gi|115483719|ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group]
gi|77548314|gb|ABA91111.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644225|dbj|BAF27366.1| Os11g0103000 [Oryza sativa Japonica Group]
Length = 543
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 26/243 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNL----YPDIAAYHSVAVTLGQVGLLKELVK 285
VYT L+ AGR + + + M + PD Y +V TL G ++
Sbjct: 199 VYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARA 258
Query: 286 LIERMRQK---PSKRIKNMHRKNW------------------DPVLEPDLVVYNAVLNAC 324
++E M Q S+ N+ K + + ++PD+V YN +++ C
Sbjct: 259 VLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGC 318
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE-AIG 383
V + G +F ++R+ G+ PSA +Y M+ SG+ L H+ F +M K A+
Sbjct: 319 VLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVD 378
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+ +LV A+ G + A V M+ RGV + Y LA + R +A+L+ E
Sbjct: 379 RAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWE 438
Query: 444 KIK 446
+IK
Sbjct: 439 EIK 441
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 124/338 (36%), Gaps = 66/338 (19%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD +NA L+AC + +F Q+ P A TY + +++ ++G+ DLV
Sbjct: 47 PDTAAFNAALSACADAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVARV 106
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR------------------ 413
++ SG A T+ LV A+ G I A V+ M +R
Sbjct: 107 LHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVADDHIIS 166
Query: 414 -------------------------GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ VY L N GR +D VV ++++
Sbjct: 167 HDQQSCVLEDIVKPWEQDEVPLLPKAYPPNSRVYTTLMKGYMNAGRVED---VVAMLRAM 223
Query: 449 RH-------SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 500
R S+P +T+T +I + + G ++ ++ + M + + T N ++K Y
Sbjct: 224 RREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYC 283
Query: 501 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 560
+ KAKEL + A ++PD TY+++++ ++
Sbjct: 284 QQLQAGKAKELLA------------VDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALF 331
Query: 561 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 598
M G + L+ + +G+ L FD +
Sbjct: 332 NEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEM 369
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 18/140 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ +G+P A ++F+ M +D + D AA++ + ++GLL+ K++ERM
Sbjct: 346 YTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERM 405
Query: 291 RQKP-----------SKRIKNMHRKN-----WDPVLEP--DLVVYNAVLNACVPSHQWKG 332
+ + +K I R W+ + E D V A+ + CV + ++
Sbjct: 406 KARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDGEVVEALADVCVRAALFRK 465
Query: 333 VFWVFKQLRKSGLKPSAATY 352
+ ++ + G++P+ A Y
Sbjct: 466 ALEMVARMEEMGVEPNKAKY 485
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 161/451 (35%), Gaps = 52/451 (11%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG----LLK 281
++ YT L+A + HE R ++ + P A Y++V +
Sbjct: 172 RTALSYTSLIAAYARNAL-HEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFD 230
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
L+ L MR S P + PDL YN +L A + +
Sbjct: 231 MLLGLFAEMRHDAS------------PSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTML 278
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
++G+ P +Y ++ +G E F +MA +G A Y L+ A G
Sbjct: 279 EAGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATA 338
Query: 402 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTG 460
+AVA +R M+ G TA+ Y L GR+ V + + +R + P + T+
Sbjct: 339 DAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDG---VRQLFREMRTAVPPDTATYNV 395
Query: 461 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
L DGG + + +F M K +P++ T ++ + A+E+ E TR
Sbjct: 396 LFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREG 455
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ P Y+ ++EA A +E + M G + L
Sbjct: 456 -------------MVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALA 502
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALINAMAYAPF 638
+R G E F + I + LI+A Q S + AV M + F
Sbjct: 503 FAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRF 562
Query: 639 HITERQWTELFESNEDRISRDKLEKLLNALC 669
+ ER LE +LNA C
Sbjct: 563 NPDER----------------SLEGVLNAYC 577
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 104/285 (36%), Gaps = 18/285 (6%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ + G +A+ + M D P A Y + G+ G + +L M
Sbjct: 324 YLGLMEAHTRVGATADAVAVLRQMQAD-GCAPTAATYRVLLDLYGRQGRFDGVRQLFREM 382
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R + PD YN + +K V +F + K+G++P
Sbjct: 383 RT----------------AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMV 426
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
T M G + E M + G A Y LV A EA A M
Sbjct: 427 TCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMM 486
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ G + T Y LA G +Q+A + ++ + + + +F LI + G
Sbjct: 487 TEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSR 546
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
+DD + + M K P+ ++ +L Y + ++KE FEE
Sbjct: 547 LDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEE 591
>gi|30699392|ref|NP_178029.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806390|sp|A3KPF8.1|PP131_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79080, chloroplastic; Flags: Precursor
gi|126352286|gb|ABO09888.1| At1g79080 [Arabidopsis thaliana]
gi|332198080|gb|AEE36201.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 17/250 (6%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T+LL L KA R +A+R+ LM+ + PD +AY + L + G + ++L+E+M
Sbjct: 110 TQLLYDLCKANRLKKAIRVIELMVSS-GIIPDASAYTYLVNQLCKRGNVGYAMQLVEKME 168
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
D + V YNA++ ++L + GL P+A T
Sbjct: 169 ---------------DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y +E + D + ++ G ++Y VL+ F +EG+ ++A+A R +
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
+G Y L CLC +GRW++A ++ ++ + P +T+ LI S G
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRA-PSVVTYNILINSLAFHGRT 332
Query: 472 DDCISIFQHM 481
+ + + + M
Sbjct: 333 EQALQVLKEM 342
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 140/342 (40%), Gaps = 44/342 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L K G A+++ M ED + Y+++ L +G L + ++ +ER+
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKM-EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 291 RQK---PS-------------KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQW 330
QK P+ +R + K D ++ EP+LV YN +L +
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+F++L G K + +Y + + + G+++ + +M A +TY +L
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNIL 322
Query: 391 VRAFWEEGKINEAVAAVRNMEQRG--VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
+ + G+ +A+ ++ M + TA+ Y + LC G+ LVV+ + +
Sbjct: 323 INSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVD---LVVKCLDEM 379
Query: 449 --RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDM 504
R KP E T+ + + + I Q + K C + + + + + +
Sbjct: 380 IYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNT 439
Query: 505 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 546
F+ A +L E TR PD +TYS+++
Sbjct: 440 FA-AFQLLYEMTRCG-------------FDPDAHTYSALIRG 467
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 118/293 (40%), Gaps = 19/293 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
+P++ +L +++ K V + + SG+ P A+ Y + + + G +
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY-YELACCL 429
KM G +TY LVR G +N+++ V + Q+G+ A Y + L
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 488
G + L+ E I ++ +P +++ L+ G DD +++F+ + + N
Sbjct: 223 KERGTDEAVKLLDEII--VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ + N +L+ + + +A L E DG P TY+ ++ + A
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEM-------------DGGDRAPSVVTYNILINSLA 327
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAW--LLVEASRAGKCHLLEHAFDSLL 599
+ E V K M+ Q T ++ ++ + GK L+ D ++
Sbjct: 328 FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 157/422 (37%), Gaps = 68/422 (16%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A A LV++L +R + V M G L++GL GS Q+ L
Sbjct: 140 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQS---L 196
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+V L K + F Y+ LL K EA+++ + ++ P++ +Y+ +
Sbjct: 197 QFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG-EPNLVSYNVLLTG 255
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIK-NMHRKN-----------WDPV-----------L 310
+ G + + L R+ P+K K N+ N W+
Sbjct: 256 FCKEGRTDDAMALF---RELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDR 312
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG--LKPSAATYGLAMEVMLQSGKYDLV 368
P +V YN ++N+ + + V K++ K + +A +Y + + + GK DLV
Sbjct: 313 APSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLV 372
Query: 369 ----HEFFRKMAKSGE----AIGALT---------------------------YKVLVRA 393
E + K E AIG+L YK ++ +
Sbjct: 373 VKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITS 432
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 453
+G A + M + G A Y L LC G + AM V+ ++ + KP
Sbjct: 433 LCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKP 492
Query: 454 LEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELF 512
F +I+ D + +F+ M + PN T +++ + D AKE+
Sbjct: 493 TVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 552
Query: 513 EE 514
+E
Sbjct: 553 DE 554
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 163/423 (38%), Gaps = 49/423 (11%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
G + G+G +G R A L +++ + + Y L+ L K+G EA+ +
Sbjct: 137 GTFATIFGGVGVEGGLRSAPVALPV---MREAGMSLNAYTYNGLIYFLVKSGFDAEAMEV 193
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
+ M+ED + P + Y + V G+ + ++ L+ M + K
Sbjct: 194 YKAMVED-GISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVK-------------- 238
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHE 370
P++ Y + + ++ + + ++ SG KP T+ + ++V+ +G+
Sbjct: 239 -PNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKA 297
Query: 371 FFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 430
F KM S + +TY L+ + G V M G Y + LC
Sbjct: 298 VFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALC 357
Query: 431 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN-- 488
GR +A+ V +++K + P + ++ LI + D + +F HM + C P+
Sbjct: 358 QVGRVDEALAVFDEMKE-KGMSPEQYSYNSLISGFLKADMFDRALELFNHM-NACGPSPN 415
Query: 489 ----------IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG-------- 530
G LK R + K+K + + AN+ Y+ L+G G
Sbjct: 416 GYTHVLFINYYGKSGQSLKAIQRYEHM-KSKGIVPDVAAANAVLYS-LAGSGRLGMAKRV 473
Query: 531 ------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
+ PD TY+ M++ + A + + + M SGC D L+ +
Sbjct: 474 FYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYK 533
Query: 585 AGK 587
GK
Sbjct: 534 GGK 536
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 141/328 (42%), Gaps = 24/328 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ P + Y+ ++ A V W+ ++ G+KP+ +Y + + V+ Q+ ++D +
Sbjct: 202 ISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAY 261
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
KM SG +T+ V+++ + G++++A A M+ Y L
Sbjct: 262 HILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKC 321
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
++G Q + V + + ++ + +++T ++ + G +D+ +++F MK+ P
Sbjct: 322 GDSGDSQSVVEVWNAMVADGYNDNI-VSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPE 380
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSS--GYT------FLSGDGAPLK------ 534
+ N+++ + + DMF +A ELF S GYT + G LK
Sbjct: 381 QYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYE 440
Query: 535 --------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
PD +++L + A + + + V+ + G D + ++ S+A
Sbjct: 441 HMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKAS 500
Query: 587 KCHLLEHAFDSLLEAGEIPHPLFFTEML 614
K + F ++E+G +P L ++
Sbjct: 501 KADEAMNFFSDMVESGCVPDVLALNSLI 528
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 165/411 (40%), Gaps = 47/411 (11%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+ LL GD G + + V W + D + + YT ++ L + GR EAL +F+
Sbjct: 315 ITLLDKCGDSGDSQSVVEV--WNAMVADGYN-DNIVSYTAVVDALCQVGRVDEALAVFDE 371
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ--------------------- 292
M E + P+ +Y+S+ + + ++L M
Sbjct: 372 MKEK-GMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSG 430
Query: 293 ---KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
K +R ++M K + PD+ NAVL + S + VF +L+ G+ P
Sbjct: 431 QSLKAIQRYEHMKSKG----IVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDT 486
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + ++ ++ K D FF M +SG L L+ ++ GK NEA
Sbjct: 487 ITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHK 546
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+++ + T Y L L G+ ++ M ++E++ + P IT+ ++ G
Sbjct: 547 LKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYP-PNLITYNTVLDCLSKNG 605
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
++ I + M + C P++ + N ++ + + +A +F + + + Y L
Sbjct: 606 EVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDYATL-- 663
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ P M EA T EY+ K +GC +D++ L+
Sbjct: 664 --CTILPSFVKNGLMKEALHTVK-----EYILK----AGCNVDKSSFHSLM 703
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/444 (20%), Positives = 182/444 (40%), Gaps = 46/444 (10%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ L K G+ +EA ++F+ L++ + P Y+++ LG+ G +KE+++L+E M
Sbjct: 527 LIDTLYKGGKGNEAWQLFH-KLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEM--- 582
Query: 294 PSKRIKNMHRKNWDPVLE------------------------PDLVVYNAVLNACVPSHQ 329
++ I + ++ VL+ PDL YN V+ + +
Sbjct: 583 -TRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEER 641
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY-DLVHEFFRKMAKSGEAIGALTYK 388
+ F +F Q++K L P AT + +++G + +H + K+G + ++
Sbjct: 642 LEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFH 700
Query: 389 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 448
L+ ++ + +++ N+ RG++ L LC + + +A + K K L
Sbjct: 701 SLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGL 760
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSK 507
S ++ LI +D ID +F MK C P+ T N +L ++ +
Sbjct: 761 GVSLKTG-SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKS---MR 816
Query: 508 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 567
+E+ + + GY + TY++++ + + E +Y + G
Sbjct: 817 VEEMLKVQKEMHRKGY----------ESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEG 866
Query: 568 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 627
+ LL ++GK E+ F+ +LE G P+ + +L + N E
Sbjct: 867 FSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVC 926
Query: 628 ALINAMAYAPFHITERQWTELFES 651
L M + + +T L ++
Sbjct: 927 QLFEKMVEQGINPDIKSYTILIDT 950
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 128/276 (46%), Gaps = 27/276 (9%)
Query: 222 KRDLKSRFV-YTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQV-- 277
++ +S +V Y +++ L K+ R +A+ ++ NLM E + T G +
Sbjct: 829 RKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSE---------GFSPTPCTYGPLLD 879
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
GLLK K+++ +N+ + + EP+ +YN +LN + + V +F
Sbjct: 880 GLLKS-GKMVDA---------ENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLF 929
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+++ + G+ P +Y + ++ + +G+ + +FR++ + G + Y +L+ +
Sbjct: 930 EKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKS 989
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEI 456
+I EAV+ M+++G++ Y L L G+ +A + E++ LR KP
Sbjct: 990 ERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEEL--LRKGWKPSVF 1047
Query: 457 TFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGT 491
T+ LI G D+ + + Q + C+PN T
Sbjct: 1048 TYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSST 1083
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 34/291 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D + + + K + M++ G T ++ GL QA +D Y L
Sbjct: 806 LILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQA---IDLYYNL 862
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-----DCNLYPDIAAYHSVAVTL 274
+ + Y LL L K+G+ +A +FN MLE +C +Y + H +A
Sbjct: 863 MSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIA--- 919
Query: 275 GQVGLLKELVKLIERM-RQKPSKRIKNM-------------------HRKNWDPVLEPDL 314
G + + +L E+M Q + IK+ R+ + LEPDL
Sbjct: 920 ---GNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDL 976
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
+VYN +++ S + + +F +++K G+ P+ TY + + ++GK + + +
Sbjct: 977 IVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEE 1036
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+ + G TY L+R + G + A AA M G +S Y +L
Sbjct: 1037 LLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 110/303 (36%), Gaps = 50/303 (16%)
Query: 312 PDLVVYNAVLNA-----------------------------------CVPSHQWKGVFWV 336
PD YN +L+A V S + + +
Sbjct: 799 PDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDL 858
Query: 337 FKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWE 396
+ L G P+ TYG ++ +L+SGK F +M + G Y +L+
Sbjct: 859 YYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRI 918
Query: 397 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 456
G M ++G+ Y L LC GR D + ++ L +P I
Sbjct: 919 AGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHEL-GLEPDLI 977
Query: 457 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 515
+ LI I++ +S+F MK PN+ T N+++ + ++A +++EE
Sbjct: 978 VYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEEL 1037
Query: 516 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 575
R KP +TY++++ + + + Y M + GCQ + + +
Sbjct: 1038 LRKG-------------WKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTY 1084
Query: 576 AWL 578
L
Sbjct: 1085 MQL 1087
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 97/523 (18%), Positives = 194/523 (37%), Gaps = 88/523 (16%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL--- 213
A+ L+D L + + W+ + + + T G LL GLG +G ++ M +L
Sbjct: 523 ALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEM 582
Query: 214 -----------------------------DWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
D +Y + +K Y ++ L K R
Sbjct: 583 TRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERL 642
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV-------------------- 284
EA R+F M + L PD A ++ + + GL+KE +
Sbjct: 643 EEAFRMFCQMKKI--LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFH 700
Query: 285 KLIERMRQKPS--KRIKNMHRKNWDPVLEPDLVVYNAVLNAC-----VPSHQWKGVFWVF 337
L+E + +K K I+ +L D + + + C + +HQ +F
Sbjct: 701 SLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQ------LF 754
Query: 338 KQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEE 397
+ + G+ +Y + ++ D+ + F +M + G TY +++ A +
Sbjct: 755 NKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKS 814
Query: 398 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 457
++ E + + M ++G T Y + L + R + A+ + + S S P T
Sbjct: 815 MRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFS-PTPCT 873
Query: 458 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 516
+ L+ + G + D ++F M ++ CEPN N +L + +LFE+
Sbjct: 874 YGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMV 933
Query: 517 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
+ PD +Y+ +++ TA + ++ + G + D +
Sbjct: 934 EQG-------------INPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYN 980
Query: 577 WLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQ 616
L+ GK +E A F+ + + G IP+ + +++
Sbjct: 981 LLI---DGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILH 1020
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/472 (20%), Positives = 185/472 (39%), Gaps = 70/472 (14%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
+ ++VDRL + + ++ +Q G L+ GLG KG+ A + +
Sbjct: 429 VNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFE--- 485
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM----------------------- 254
+ D + VYT L+ GR + +IF M
Sbjct: 486 NMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAG 545
Query: 255 --------LEDCNLY---PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
ED Y PD+ +Y + L + G +E + M+Q+
Sbjct: 546 DVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG--------- 596
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
D YNAV++ S + + V ++++ + P+ ATYG ++ + +
Sbjct: 597 ------FALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKID 650
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
+ D + F + G + + Y L+ F + G+I+EA + M ++G+ +
Sbjct: 651 RLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 710
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 482
L L +A++ + +K ++ S P T++ LI + +Q M K
Sbjct: 711 SLMDALVKAEEINEALICFQSMKEMKCS-PNTYTYSILINGLCRVQKYNKAFVFWQEMQK 769
Query: 483 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 542
PN+ T M+ ++ + A LFE R ++G T PD ++++
Sbjct: 770 QGLVPNVVTYTTMIAGLAKVGNITDACSLFE---RFKANGGT----------PDAASFNA 816
Query: 543 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 594
++E + A++ +V++ L GC+++ K L++A +C LE A
Sbjct: 817 LIEGMSHANRAIEAYHVFEETRLKGCRIN-VKACISLLDALNKAEC--LEQA 865
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/446 (19%), Positives = 182/446 (40%), Gaps = 45/446 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ + +A +P AL + M ++ + + ++ L + G ++ + L++ +
Sbjct: 185 YTVLIGAMAEARQPERALELLRQM-QEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ LEPD+V+YN ++ + + F +L+ GLKP
Sbjct: 244 KGS---------------CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDV 288
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
+Y + V+ ++G+ E F +M A Y ++ + G+ A + +
Sbjct: 289 SYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQL 348
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
++RG + + + + CL + +A+ + E +K + ++P T+ +I G
Sbjct: 349 KERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK--KDAEPNSSTYNIIIDMLCMAGK 406
Query: 471 IDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEETTR--ANSSGYTFL 526
+++ I M +H PN+ TVN M+ + F A E+FE ++ N + T+
Sbjct: 407 VEEAYMIRDEM-EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYC 465
Query: 527 S-GDGAPLKP---DEY-TYSSMLEASATAHQWEYFEY---------------VYKGMALS 566
S DG K D Y + +ML+ A+ Y ++K M
Sbjct: 466 SLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRR 525
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
GCQ D T + +AG F+ + G +P ++ +LI + ++ +
Sbjct: 526 GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYS-ILIHGLTKAGQARE 584
Query: 627 V-ALINAMAYAPFHITERQWTELFES 651
++ +AM F + R + + +
Sbjct: 585 TSSIFHAMKQQGFALDARAYNAVVDG 610
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 175/446 (39%), Gaps = 28/446 (6%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + A +LD LK++ + S + +L LGK + EAL +F M
Sbjct: 328 MIMGYGSAGQFENAYKLLDQ---LKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK 384
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P+ + Y+ + L G ++E + + M L P+L+
Sbjct: 385 KDAE--PNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAG---------------LFPNLL 427
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
N +++ + +++ + +F+ + G P++ TY ++ + + G D + F M
Sbjct: 428 TVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENM 487
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+G + Y L+R F+ G+ + + M +RG ++ C+ G
Sbjct: 488 LDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDV 547
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNA 494
+ + E IK P +++ LI G + SIF MK + NA
Sbjct: 548 EKGRAIFEDIKGYGF-LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNA 606
Query: 495 MLKVYSRNDMFSKAKELFEE--TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
++ + ++ KA E+ EE R + T+ S K D + ML A +
Sbjct: 607 VVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKG 666
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVE----ASRAGKCHLLEHAFDSLLEAGEIPHPL 608
E VY + ++ + A+L++E + D+L++A EI L
Sbjct: 667 IELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEAL 726
Query: 609 FFTEMLIQAIVQSNYEKAVALINAMA 634
+ + + N LIN +
Sbjct: 727 ICFQSMKEMKCSPNTYTYSILINGLC 752
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/336 (17%), Positives = 132/336 (39%), Gaps = 58/336 (17%)
Query: 336 VFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFW 395
V +R+ +P+ + Y + + M ++ + + E R+M + G +G + LVRA
Sbjct: 169 VIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALA 228
Query: 396 EEGKINEAVAAV-----------------------------------RNMEQRGVVGTAS 420
EG++ A+A V ++ +G+
Sbjct: 229 REGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDV 288
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
Y + LC GR +A + ++++ R + P + +I+ G ++ +
Sbjct: 289 SYTSMIWVLCKAGRLSEAEELFGQMETER-AVPCAYAYNTMIMGYGSAGQFENAYKLLDQ 347
Query: 481 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR---ANSSGYTF------LSG-- 528
+K+ C P++ + N++L + +A LFE + NSS Y ++G
Sbjct: 348 LKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKV 407
Query: 529 ----------DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
+ A L P+ T + M++ A ++E +++ + GC + + L
Sbjct: 408 EEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSL 467
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + G F+++L+ G +P+ +T ++
Sbjct: 468 IDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLI 503
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 175/422 (41%), Gaps = 49/422 (11%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
K WR E ++ L D++ ++ K+ +FV I++ + T ++K +G + SW+
Sbjct: 121 KDWR---ERVKFLTDKI----LSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQE-SWQ 172
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ V +W+ L+ +R V +L +LG+ + A+ IF + + + Y
Sbjct: 173 RALEVFEWL-NLRHWHSPNARMV-AAILGVLGRWNQESLAVEIFTR--AEPTVGDRVQVY 228
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIK------NMHRKNWDPV 309
+++ + G + +L++ MRQ+ + R+K N+ + D V
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 310 ----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
L PD + YN +L+AC G VF+ + +P TY + V + G
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
F ++ G A+TY L+ AF E + + M++ G Y +
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 484
G+ A+ + + +K L P IT+T LI S + ++ M D
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 485 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 544
+P + T +A++ Y++ +A++ F R+ + KPD YS ML
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGT-------------KPDNLAYSVML 515
Query: 545 EA 546
+
Sbjct: 516 DV 517
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 24/332 (7%)
Query: 325 VPSHQWKGVFWVFKQLR-KSGLKPSAATYGLAMEVMLQSGKYDLVHEFF-RKMAKSGEAI 382
V W+ VF+ L + P+A + V+ + + L E F R G+ +
Sbjct: 166 VGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRV 225
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
Y ++ + GK ++A V M QRG V + L +G L V
Sbjct: 226 Q--VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN-LAV 282
Query: 443 EKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 499
E + +R+S +P IT+ L+ + ++D + +F+ M+ H C+P++ T NAM+ VY
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 500 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 559
R + ++A+ LF E L G PD TY+S+L A A E + V
Sbjct: 343 GRCGLAAEAERLFMELE---------LKG----FFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 560 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE-AGEIPHPLFFTEMLIQAI 618
Y+ M G D+ + ++ + G+ L + + +G P + +T +LI ++
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT-VLIDSL 448
Query: 619 VQSNYE-KAVALINAMAYAPFHITERQWTELF 649
++N +A AL++ M T + ++ L
Sbjct: 449 GKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PDL +N++++A ++ +F + + G P+ + + + + G+ + ++
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
++ G I + +++ AF G I E +M+ G + T +Y + LC
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD---CISIFQHMKDH-CEP 487
R +DA ++V +++ L I + L + + I+D + ++Q +K+ EP
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYT----AIEDYKKTVQVYQRIKETGLEP 960
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG-DGAPLKPDEYTYSSMLEA 546
+ T N ++ +Y R+ R GY + L P TY S++ A
Sbjct: 961 DETTYNTLIIMYCRD--------------RRPEEGYLLMQQMRNLGLDPKLDTYKSLISA 1006
Query: 547 SATAHQWEYFEYVYKGMALSGCQLDQT 573
E E +++ + G +LD++
Sbjct: 1007 FGKQKCLEQAEQLFEELLSKGLKLDRS 1033
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 105/250 (42%), Gaps = 22/250 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ---VGLLKELVK 285
+ Y ++++ G+ G EA R+F + LE +PD Y+S+ + +KE+ +
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLF-MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQ 391
Query: 286 LIERM----RQKPSKRIKNMHRKN--WDPVLE------------PDLVVYNAVLNACVPS 327
+++M + I +M+ K D L+ PD + Y ++++ +
Sbjct: 392 QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 451
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
++ + ++ G+KP+ TY + ++GK + + F M +SG L Y
Sbjct: 452 NRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 511
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 447
V++ + +A R+M G + ++Y + L R D + ++
Sbjct: 512 SVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Query: 448 LRHSKPLEIT 457
L PLEI+
Sbjct: 572 LCGMNPLEIS 581
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 107/532 (20%), Positives = 201/532 (37%), Gaps = 45/532 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
LLK L D+G QA +L + G D+ + YT ++ K G ++A +F
Sbjct: 192 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA---YTTVIDCFFKEGDVNKACDLFKE 248
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M++ + PD+ Y SV L + R K ++ M K + PD
Sbjct: 249 MVQR-GIPPDLVTYSSVVHALCK-----------ARAMGKAEAFLRQMVNKG----VLPD 292
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
YN ++ + QWK VFK++R+ + P T + M + + GK + F
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 433
MA G+ +YK+++ + +G + + M G+ + L N G
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412
Query: 434 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 492
AM++ +++ KP +T+T +I + G +DD + F M D P+
Sbjct: 413 MLDKAMIIFNEMRD-HGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 471
Query: 493 NAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSGDGAPLK-------------- 534
+ +++ + + KAKEL E R + ++ + + L
Sbjct: 472 HCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVN 531
Query: 535 ----PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 590
PD YS +++ + E V+ M +G + + + L+ + G+
Sbjct: 532 VGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDE 591
Query: 591 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
F +L+ G P + + ++ V A + M + I + + +
Sbjct: 592 GLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLR 651
Query: 651 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSS 702
D+ L L N IT++ + + R E+ +DL +S
Sbjct: 652 GFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 703
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 160/411 (38%), Gaps = 44/411 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+V L + K F+R M G++ L+ G G W++A+ V ++
Sbjct: 264 VVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE---MR 320
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGL 279
L L+ L K G+ EA +F+ M ++ N PD+ +Y + G
Sbjct: 321 RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQN--PDVFSYKIMLNGYATKGC 378
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L ++ L + M + PD+ ++ ++ A +F +
Sbjct: 379 LVDMTDLFDLMLGDG---------------IAPDIYTFSVLIKAYANCGMLDKAMIIFNE 423
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
+R G+KP TY + + + GK D E F +M G A Y L++ F G
Sbjct: 424 MRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 483
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
+ +A + + G+ + + LC GR DA + + ++ P + ++
Sbjct: 484 LLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQ-HPDAVVYS 542
Query: 460 GLIISSMDG----GHIDDCISIFQHM-KDHCEPNI---GT-VNAMLKVYSRNDMFSKAKE 510
L MDG G ++ + +F M EPN+ GT VN K+ ++ S +E
Sbjct: 543 ML----MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFRE 598
Query: 511 LFEETTRANSSGYT------FLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
+ ++ + ++ Y F++G P K + M E+ ++ Y
Sbjct: 599 MLQKGIKPSTILYNIIIDGLFVAGRTVPAK---VKFHEMTESGIAINKCTY 646
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/360 (18%), Positives = 133/360 (36%), Gaps = 66/360 (18%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK---------------------- 346
VL P Y +++ C +H+ + F QL ++GL+
Sbjct: 110 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 169
Query: 347 --------------PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG--ALTYKVL 390
P +Y + ++ + GK + R MA+ G + Y +
Sbjct: 170 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTV 229
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ F++EG +N+A + M QRG+ Y + LC A + ++ + +
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVN-KG 288
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 509
P T+ LI G + + +F+ M+ H P++ T+N ++ + +A+
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348
Query: 510 ELFEETTRANSS-----------GYT-------------FLSGDGAPLKPDEYTYSSMLE 545
++F+ + GY + GDG + PD YT+S +++
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDG--IAPDIYTFSVLIK 406
Query: 546 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
A A + ++ M G + D + ++ R GK F+ +++ G P
Sbjct: 407 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 466
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 140/373 (37%), Gaps = 51/373 (13%)
Query: 345 LKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAV 404
L P++ TY + M+ ++ + +L FF ++ ++G + + L++ F E + +EA+
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170
Query: 405 -AAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLRHSKPLEITFTGLI 462
+ + G V Y L LC+ G+ Q L+ + P + +T +I
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230
Query: 463 ISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G ++ +F+ M + P++ T ++++ + KA+ +
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG-- 288
Query: 522 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 581
+ PD +TY++++ ++ QW+ V+K M D L+
Sbjct: 289 -----------VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGS 337
Query: 582 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 641
+ GK FD++ G+ P + ML + Y L++
Sbjct: 338 LCKYGKIKEARDVFDTMAMKGQNPDVFSYKIML------NGYATKGCLVD---------- 381
Query: 642 ERQWTELFESN-EDRISRD--KLEKLLNALCNCNAASSEITVSNLSR------------- 685
T+LF+ D I+ D L+ A NC + + N R
Sbjct: 382 ---MTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTT 438
Query: 686 ALHALCRSEKERD 698
+ ALCR K D
Sbjct: 439 VIAALCRIGKMDD 451
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/221 (17%), Positives = 91/221 (41%), Gaps = 19/221 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ L G A ++ D + D VY+ L+ G+ +ALR+F+ M+
Sbjct: 509 IINNLCKLGRIMDAQNIFDLTVNVGQHPD---AVVYSMLMDGYCLVGKMEKALRVFDAMV 565
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P++ Y ++ ++G + E + L M QK K P +
Sbjct: 566 S-AGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK---------------PSTI 609
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
+YN +++ + + F ++ +SG+ + TY + + ++ +D F+++
Sbjct: 610 LYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKEL 669
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
I +T ++ ++ ++ EA ++ + G+V
Sbjct: 670 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 710
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/485 (18%), Positives = 175/485 (36%), Gaps = 84/485 (17%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
K V M ++G L+ GL G+ +A + ++D + F Y ++
Sbjct: 264 KVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFG---YKKEMEDYGLVPDGFTYGAII 320
Query: 236 AILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ-- 292
L K GRP +A + + M C L P++ Y ++ + G E K+++ M
Sbjct: 321 NGLCKRGRPDQAKCLLDEM--SCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378
Query: 293 ----------------------KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ S+ +K M + + D + YN V+ + H
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY----MADTMTYNLVIEGHLRQHNK 434
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVL 390
+ F + ++RK G+ P+ TY + + + Q G+ + +M G A Y L
Sbjct: 435 EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPL 494
Query: 391 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 450
+ + EG + A ++ M + + T +Y
Sbjct: 495 ISGYCREGSFSLACETLKKMTRENL--TPDLY---------------------------- 524
Query: 451 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAK 509
+ LII + G +D+ I + M + +PN T ++ YS KA+
Sbjct: 525 ------CYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAE 578
Query: 510 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 569
+L + + L P+++ Y+ +LE + E K M G
Sbjct: 579 QLLHQMLNSG-------------LNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLM 625
Query: 570 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 629
D + ++ S +G + + G +P L + ++ ++ EKAV L
Sbjct: 626 PDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGL 685
Query: 630 INAMA 634
++ MA
Sbjct: 686 LDEMA 690
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/415 (19%), Positives = 161/415 (38%), Gaps = 33/415 (7%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E + PD+ Y ++ +V L+ K++E MR+ ++
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSL---------------NV 278
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
V YN ++ + + F K++ GL P TYG + + + G+ D +
Sbjct: 279 VTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDE 338
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
M+ +G + Y L+ F +G +EA V+ M GV Y L LC GR
Sbjct: 339 MSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGR 398
Query: 435 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 493
A +++++ + + +T+ +I + + ++ + M K PN+ T +
Sbjct: 399 MGRASRILKQMTKIGYMAD-TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYS 457
Query: 494 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 553
++ + +A L E+ + DG LKP+ + Y+ ++ +
Sbjct: 458 IIINGLCQIGESERASGLLEQ-----------MIADG--LKPNAFVYAPLISGYCREGSF 504
Query: 554 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 613
K M D + L++ S GK +D +LE G P+ + +
Sbjct: 505 SLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGL 564
Query: 614 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 668
+ + N EKA L++ M + + + + ++ E D LEK+ + L
Sbjct: 565 IHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG---YFKSDNLEKVSSTL 616
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 117/294 (39%), Gaps = 19/294 (6%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F+Y ++L K+ + MLE L PD Y V L G ++ V ++
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEK-GLMPDNRLYGIVIHNLSSSGHMQAAVSVLS 652
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+ KN L PD ++Y ++++ + + + ++ K G++P
Sbjct: 653 VIE------------KNG---LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPG 697
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+ Y ++ +S F + G +TY L+ + + G I +A+
Sbjct: 698 ISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYN 757
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M GV A VY LA N+G Q A+ + E++ + ++ + +F L+
Sbjct: 758 EMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA--IISSFNTLVHGFCKR 815
Query: 469 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
G + + + M D P++ TV ++ S+A +F E + N+S
Sbjct: 816 GKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNAS 869
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 165/404 (40%), Gaps = 34/404 (8%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
F+R M L +G + L+ GL G +A+ + W L K + + L+
Sbjct: 453 FIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVEL--WCR-LLGKGFVPNIVTSNALIH 509
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
L KAG E L++ MLE L D Y+++ + G +KE +L E M +K
Sbjct: 510 GLCKAGNMQETLKLLRDMLER-GLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG-- 566
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
++PD+ +N +L+ + + ++ + +K+G P+ TYG+ +
Sbjct: 567 -------------IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMI 613
Query: 357 EVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
+ ++ K + ++ + ++ Y L+RA+ G +N A +M+ RGV+
Sbjct: 614 DGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVL 673
Query: 417 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 476
+ + Y L LCN G DA ++++++ P + +T +I G ++
Sbjct: 674 LSCATYSSLMHGLCNIGLVDDAKHLLDEMRK-EGLLPNVVCYTTIIGGYSKLGQMNKVNI 732
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 535
+ Q M H PN T M+ + + +A +L E T + P
Sbjct: 733 VLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKG-------------ILP 779
Query: 536 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
D TY++ + E V M+ LD+ + L+
Sbjct: 780 DAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+ +++ ++NA H+ +F ++ K G+ P+ TY + + +SG+ D + F
Sbjct: 254 PDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRF 313
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
KM K + +TY V + + KI+EA ++ M + G V VY L C
Sbjct: 314 KEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCK 373
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 462
G +A+ + + + S + P +T LI
Sbjct: 374 MGNISEALKIRDDMLS-KGISPNSVTLNSLI 403
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 145/355 (40%), Gaps = 35/355 (9%)
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE----LVKLIERMRQKPSKRIK 299
P AL F+ + E C +Y + L LL L++LI+ + P+ +
Sbjct: 100 PKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLIDG--KVPAFYAR 157
Query: 300 NMHRK---------NWDPVLEPDLVVYNAVLNACVPSHQWKGVFW-----VFKQLRKSGL 345
N + +++ V EP + V A L V S Q+K + + VF L K GL
Sbjct: 158 NFESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGL 217
Query: 346 KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVA 405
PS T + ++++ + +E + + G + ++ AF + + ++A+
Sbjct: 218 FPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIG 277
Query: 406 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 465
ME+ GV Y + LC +GR +A EK+ + S P IT++ I
Sbjct: 278 LFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVS-PSLITYSVFINGL 336
Query: 466 MDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
+ ID+ + + M + PN N ++ Y + S+A ++ ++ S G
Sbjct: 337 IKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDML---SKG-- 391
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ P+ T +S+++ + Q E V + M G ++Q + ++
Sbjct: 392 --------ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVI 438
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 167/410 (40%), Gaps = 55/410 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+++ ++ K R +A+ +F+ M E + P++ Y+++ L + G L E + E+
Sbjct: 258 LFSTMINAFCKGHREDDAIGLFSKM-EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEK 316
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M ++ + P L+ Y+ +N + + V K++ + G P+
Sbjct: 317 MVKEK---------------VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNE 361
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
Y ++ + G + M G + ++T L++ F + +I +A +
Sbjct: 362 VVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEE 421
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
M RG+ + + LC R+ A+ + ++ LR+ +P + T L+ G
Sbjct: 422 MIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREM-LLRNLRPNDGLLTTLVSGLCKAG 480
Query: 470 HIDDCISIF-QHMKDHCEPNIGTVNAML----KVYSRNDMFSKAKELFEETTRANSSGY- 523
+ + ++ + + PNI T NA++ K + + +++ E + Y
Sbjct: 481 KQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYN 540
Query: 524 TFLSG--------DGAPLK---------PDEYTYSSML----------EASATAHQWE-- 554
T +SG +G LK PD YT++ +L EAS H+ +
Sbjct: 541 TLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKN 600
Query: 555 -YFEYVYK-GMALSG-CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 601
Y VY G+ + G C+ ++ + L+ + K L ++SL+ A
Sbjct: 601 GYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRA 650
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 19/241 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+V YN + + V + + +SG+ P+ TY + ++ ++G+ +F
Sbjct: 197 PDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDF 256
Query: 372 FRKMAKSGEA-----IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
F +M K G ++Y +V G++ +A M + G + + Y L
Sbjct: 257 FLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALI 316
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 485
+C G +DA+ V + ++ ++ P +T+T LI G ID + + + MK+ C
Sbjct: 317 QVICKKGNVEDAVTVFDGMR-VKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGC 375
Query: 486 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
EP + T N +++ K +LFE+ ++ G P++ TY+ ++
Sbjct: 376 EPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSK------------GEECLPNQDTYNIIIS 423
Query: 546 A 546
A
Sbjct: 424 A 424
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 12/221 (5%)
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
AL + LM+E + P Y+ + + G L+ +M+++ SK
Sbjct: 217 RALDVLRLMVES-GIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSK--------- 266
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKY 365
D +PD+V Y +++ + Q + VF ++ K G PS ATY ++V+ + G
Sbjct: 267 -DESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNV 325
Query: 366 DLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 425
+ F M G +TY VL+R GKI+ + + M+ G Y L
Sbjct: 326 EDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVL 385
Query: 426 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
L G + + + EK+ P + T+ +IIS+M
Sbjct: 386 IRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYN-IIISAM 425
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 120/274 (43%), Gaps = 31/274 (11%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+R+ + L D + T++ +R+M +SG+ T+ +LKG G R
Sbjct: 192 EQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLR 251
Query: 208 QAMSVLDWVY-------GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCN 259
A W + G KD+ YT ++ LG AG+ +A ++F+ M E C
Sbjct: 252 HA-----WDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCA 306
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
P +A Y+++ + + G +++ V + + MR K P++V Y
Sbjct: 307 --PSVATYNALIQVICKKGNVEDAVTVFDGMRVKG---------------YVPNVVTYTV 349
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ + + + ++++ G +P TY + + + + G+ + + F KM+K
Sbjct: 350 LIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGE 409
Query: 380 EAI-GALTYKVLVRAFWEEGKINEAVAAVRNMEQ 412
E + TY +++ A + + + V A R +E+
Sbjct: 410 ECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEE 443
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 197/468 (42%), Gaps = 52/468 (11%)
Query: 106 DNLKRENLRELKEM-FEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWR---SEAEAIRVL 161
D+L +E +RE+ E F + L L D+ Q D+ K + +K + A+ R
Sbjct: 101 DSLGKEEIREIGEAGFGEGLE--LGDETQ---DFLGKTSKNRVKKMTKLALKRAKDWRQR 155
Query: 162 VDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
V L++R + K+ +FV +++ + T ++K +G + SW++A+ V +W+ L+
Sbjct: 156 VQFLTDRILGLKSEEFVADVLDDRKVQMTPTDFCFVVKWVG-QSSWQRALEVYEWL-NLR 213
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+R + T +L++LGKA + A+ IF + + Y+++ + G
Sbjct: 214 HWYSPNARMLAT-ILSVLGKANQEALAVEIFAR--AEAAXGNTVQVYNAMMGVYARTGRF 270
Query: 281 KELVKLIERMRQ------------------KPSKRIKNMHRKNWDPV----LEPDLVVYN 318
++ +L++ MR K + N+ + + V ++PD++ YN
Sbjct: 271 TKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYN 330
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+++AC + V+ + +P TY + V + G F+ +
Sbjct: 331 TLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESK 390
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G A+TY L+ AF EG +++ +M + G Y + G+ A
Sbjct: 391 GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLA 450
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK 497
+ +K L P +T+T LI S I + + M + +P + T +A++
Sbjct: 451 FQLYSDMK-LSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALIC 509
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 545
Y++ +A+E F+ R+ +KPD YS ML+
Sbjct: 510 GYAKAGKRVEAEETFDCMLRSG-------------IKPDHLAYSVMLD 544
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 154/386 (39%), Gaps = 42/386 (10%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S +Y ++ K G P A + + E L+ D++ + V G++ L ++ L
Sbjct: 742 SDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESL 801
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +RQK + + RK W NA+++A S ++ +F + + G
Sbjct: 802 VGSLRQKCTM----VDRKVW-----------NALIHAYAASGCYERARAIFNTMMRDGPS 846
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
P+ + M+ ++ G+ D ++ +++ G I + +++ AF G I E
Sbjct: 847 PTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKI 906
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI------TFTG 460
+ M+ G T +Y + L R +D +V +++ L I +TG
Sbjct: 907 YQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTG 966
Query: 461 LIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 519
+ G ++Q +++ +P+ T N ++ +Y R+ + L E R
Sbjct: 967 I-------GDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVG 1019
Query: 520 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
L+P TY S++ A E E +++G+ C+LD++ + ++
Sbjct: 1020 -------------LEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMM 1066
Query: 580 VEASRAGKCHLLEHAFDSLLEAGEIP 605
+G E + EAG P
Sbjct: 1067 KMFRNSGNHSKAEKLLGVMKEAGVEP 1092
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 113/279 (40%), Gaps = 24/279 (8%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
Y L++ + EA++++N M+ C PD+ Y+++ G+ G+ +E +L
Sbjct: 327 ITYNTLISACSRESNLEEAVKVYNDMVAHRCQ--PDLWTYNAMISVYGRCGMSREAGRLF 384
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ + K PD V YN++L A V + + + K G
Sbjct: 385 KDLESKG---------------FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGK 429
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
TY + + + G++DL + + M SG + A+TY VL+ + + I EA +
Sbjct: 430 DEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVM 489
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISS 465
M V T + L C G+ +A E + S KP + ++ ++
Sbjct: 490 SEMLNAXVKPTLRTFSALICGYAKAGKRVEAE---ETFDCMLRSGIKPDHLAYSVMLDIL 546
Query: 466 MDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRND 503
+ + ++Q M H +P+ ML+V + +
Sbjct: 547 LRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKEN 585
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 172/407 (42%), Gaps = 49/407 (12%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-N 252
+ +LK G+ G + A D++ ++ R K + V T ++ LG+ G + ALR+F +
Sbjct: 145 IYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVST-MIGTLGRLGEINHALRLFES 203
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKN--------- 300
LE + ++ ++ G+ G + V L MR P+ N
Sbjct: 204 ARLEGHG--NTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKG 261
Query: 301 -----MHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ K +D +L PD + YN++L+ C W+ + ++ + G+ A T
Sbjct: 262 EVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFT 321
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y ++ + + G+ DL +M+ +TY ++ + + +A+ M+
Sbjct: 322 YNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMK 381
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
R + Y + GR+ +A+ ++++S + + +T+ L+ G
Sbjct: 382 LRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDV-VTYNALLSGYGRYGMY 440
Query: 472 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN----------- 519
D+ +F+ MK + PN T + M+ VY++ MF +A +++++ +A
Sbjct: 441 DEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSI 500
Query: 520 -----------SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
SS ++ +KP+ T++S+++AS + EY
Sbjct: 501 IDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEY 547
Score = 39.7 bits (91), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 16/206 (7%)
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+Q G + + + L G A+ + E + H + +F+ +I + GH
Sbjct: 170 KQNGRIAKGKLVSTMIGTLGRLGEINHALRLFESARLEGHGNTV-YSFSAMISAYGRNGH 228
Query: 471 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM-FSKAKELFEETTRANSSGYTFLSG 528
D + +F+ M+ PN+ + N+++ ++ ++ F + F+E +
Sbjct: 229 FSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDE-----------MLA 277
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 588
+G + PD TY+S+L A+ WE + + M G D + L + G+
Sbjct: 278 EG--IVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQI 335
Query: 589 HLLEHAFDSLLEAGEIPHPLFFTEML 614
L + + P + ++ M+
Sbjct: 336 DLARRVLEEMSSRRVWPTVVTYSTMI 361
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 159/418 (38%), Gaps = 69/418 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y LL L K + + ++F ++ L+ CN PD Y + G++G +E + L
Sbjct: 275 FAYNMLLDALAKDEQLDRSYKVFKDMKLKHCN--PDEYTYTIMIRMTGKMGRAEESLALF 332
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M K P+L+ YN ++ A S +F + K+ +P
Sbjct: 333 EEMLTKGCT---------------PNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRP 377
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ TY + + V++ G+ + E + S + I Y LVR + G +EA
Sbjct: 378 NEFTYSIILNVLVAEGQLGRLDEV---LEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLF 434
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI---------------------- 445
NM G Y + LC G+ +A+ ++ K+
Sbjct: 435 CNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKL 494
Query: 446 ----------KSLRHSKPLEITFT-GLIISSMDG-GHIDDCISIFQHMKDH-CEPNIGTV 492
+ ++ P FT ++ISS+ G + + + +F+ ++ C+P+I +
Sbjct: 495 KQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISY 554
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N+++ +N +A FL L PD TYS+++E +
Sbjct: 555 NSLINCLGKNGDVDEAH-------------MRFLEMQDKGLNPDVVTYSTLIECFGKTDK 601
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
E ++ M GC + + LL RAG+ + L E G P + +
Sbjct: 602 VEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITY 659
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 19/229 (8%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+ +L+ L G +A+ +L V+ +K +Y +L+ LGK + ++
Sbjct: 450 ISMLESLCRGGKTVEAIELLSKVH---EKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 506
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M +D +PDI Y+ + +LG+VG +KE V++ E + K PD
Sbjct: 507 MKQD-GPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCK---------------PD 550
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
++ YN+++N + F +++ GL P TY +E ++ K ++ F
Sbjct: 551 IISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFD 610
Query: 374 KMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 422
+M G +TY +L+ G+ E V + ++G+ + Y
Sbjct: 611 RMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITY 659
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 20/266 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L G +A + ++ D D R Y +L L + G+ EA+ + + +
Sbjct: 417 LVRTLSKLGHSSEAHRLFCNMWSFHDGGD---RDAYISMLESLCRGGKTVEAIELLSKVH 473
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + D Y++V TLG++ + L L E+M+Q P PD+
Sbjct: 474 EK-GISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQD-------------GPF--PDIF 517
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN ++++ + K VF++L S KP +Y + + ++G D H F +M
Sbjct: 518 TYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEM 577
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +TY L+ F + K+ A + M +G Y L CL GR
Sbjct: 578 QDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRT 637
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGL 461
+ + + K++ + P IT+ L
Sbjct: 638 AETVDLYAKLRE-QGLTPDSITYAIL 662
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 16/193 (8%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L G +Q + D +K F Y L++ LG+ G+ EA+ +F LE +
Sbjct: 488 LSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFE-ELESSD 546
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
PDI +Y+S+ LG+ G + E R M K L PD+V Y+
Sbjct: 547 CKPDIISYNSLINCLGKNGDVDE-----------AHMRFLEMQDKG----LNPDVVTYST 591
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSG 379
++ + + + +F ++ G P+ TY + ++ + ++G+ + + K+ + G
Sbjct: 592 LIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQG 651
Query: 380 EAIGALTYKVLVR 392
++TY +L R
Sbjct: 652 LTPDSITYAILDR 664
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 55/121 (45%)
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+R + S R N++ + W + D+ YN +L+A Q + VFK ++ P
Sbjct: 250 IRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDE 309
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + + + G+ + F +M G + Y +++A + G +++A+ N
Sbjct: 310 YTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCN 369
Query: 410 M 410
M
Sbjct: 370 M 370
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 22/184 (11%)
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-TTRANSSGYTFL-- 526
ID I M +D I TVN ++K++S N+ L ++ R N+ Y L
Sbjct: 188 IDQVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQ 247
Query: 527 ------SGDGA----------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 570
D A + D + Y+ +L+A A Q + V+K M L C
Sbjct: 248 AHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNP 307
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVAL 629
D+ + ++ + G+ F+ +L G P+ + + M IQA+ +S +KA+ L
Sbjct: 308 DEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTM-IQALSKSGMVDKAILL 366
Query: 630 INAM 633
M
Sbjct: 367 FCNM 370
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 160/382 (41%), Gaps = 36/382 (9%)
Query: 200 LGDKGSWRQAMSVL-DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
L DKG A++V+ D V+ + + VYT +L+ G A R F+ M
Sbjct: 339 LCDKGRVSDALTVVEDMVH----HKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRK- 393
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
L D Y ++ L + G LKE K+++ M + R+ L+ D V Y
Sbjct: 394 GLATDGVTYTTLINGLCRAGELKEAEKVLQEM----------LARR-----LDVDEVTYT 438
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKS 378
+++ + F V + + G+ P+ TY + + + G +E +M+
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498
Query: 379 GEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 438
G + A TY L+ + G +++A+ + +M+ G+ Y L LC +G A
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558
Query: 439 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 497
+++++ KP +T+ L+ G ++ + + M + + PN T N+++K
Sbjct: 559 HDLLQEMLD-NGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMK 617
Query: 498 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 557
Y + E+++ N ++P+E TY+ +++ A + +
Sbjct: 618 QYCIGNNMKSTTEIYKGMCSRN-------------VEPNENTYNILIKGHCKARSMKEAQ 664
Query: 558 YVYKGMALSGCQLDQTKHAWLL 579
Y + M G +L + ++ L+
Sbjct: 665 YFHNEMIEKGFRLTASSYSALI 686
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 140/346 (40%), Gaps = 54/346 (15%)
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
+ +Y + ++V+ +G+ + + F +MA + + TY +L+ + G++ AV +
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMASPPDVV---TYGILIHGYCALGELENAVKLL 317
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+M RGV A+VY + LC+ GR DA+ VVE + + H L+ ++S
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDM--VHHKVILDEAVYTTVLS--- 372
Query: 468 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G N + D+ S A+ F+E R L+
Sbjct: 373 ----------------------GFCN-------KGDLVS-ARRWFDEMQRKG------LA 396
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
DG TY++++ A + + E V + M +D+ + L+ + GK
Sbjct: 397 TDGV-------TYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGK 449
Query: 588 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 647
+++++ G P+ + +T + Q + + A L++ M+ + +
Sbjct: 450 MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 509
Query: 648 LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 693
L L++ + + + +AA + V + + ALC+S
Sbjct: 510 LING---LCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/418 (18%), Positives = 149/418 (35%), Gaps = 72/418 (17%)
Query: 286 LIERMRQ---KPSKRIKN--MHRKNWDPVLE-----PD--LVVYNAVLNACVPSHQWKGV 333
L+ R+RQ PS N + R D +E PD + YN +L + + +
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLPLDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDA 281
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+F ++ P TYG+ + G+ + + M G A Y +V
Sbjct: 282 RQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVAL 338
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG------RW----------QD 437
++G++++A+ V +M V+ +VY + CN G RW D
Sbjct: 339 LCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 398
Query: 438 AMLVVEKIKSLRHSKPL------------------EITFTGLIISSMDGGHIDDCISIFQ 479
+ I L + L E+T+T L+ G + + +
Sbjct: 399 GVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHN 458
Query: 480 HM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN----------------SSG 522
M + PN+ T A+ + A EL E + +G
Sbjct: 459 TMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG 518
Query: 523 Y------TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 576
Y T D A LKPD YTY+++++A + + + + + M +G + +
Sbjct: 519 YLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYN 578
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
L+ +G+ + + +LE P+ + ++ Q + +N + + M
Sbjct: 579 VLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMC 636
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 96/256 (37%), Gaps = 24/256 (9%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M+ GL L+ GL G QAM + + K D+ + YT L+ L K
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDV---YTYTTLIDALCK 551
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKR 297
+G A + ML++ + P I Y+ + G ++ KL+E M +K P+
Sbjct: 552 SGELDRAHDLLQEMLDN-GIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNAT 610
Query: 298 IKNMHRKNW-----------------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
N K + +EP+ YN ++ + K + ++
Sbjct: 611 TYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEM 670
Query: 341 RKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKI 400
+ G + +A++Y + ++ + K+ + F M K G Y + + E +
Sbjct: 671 IEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNL 730
Query: 401 NEAVAAVRNMEQRGVV 416
+A + + +V
Sbjct: 731 EATLALCDELVEASIV 746
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 137/317 (43%), Gaps = 30/317 (9%)
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
++A +++ + G++G+++EL+ + +M++ +EP L YN ++N
Sbjct: 169 VSAANALIKSFGKLGMVEELLWVWRKMKENG---------------IEPTLYTYNFLMNG 213
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
V + VF+ + +KP TY ++ ++G+ E R M G
Sbjct: 214 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 273
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
+TY +++A + + VA + M+++G+ + + LC G+ + V E
Sbjct: 274 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 333
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRN 502
+ + SKP +T LI G ++D I + M D +P++ T + ++ +N
Sbjct: 334 NMIR-KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 392
Query: 503 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 562
+A + F T R DG L + YSS+++ A + + E +++
Sbjct: 393 GRVEEALDYFH-TCRF----------DG--LAINSMFYSSLIDGLGKAGRVDEAERLFEE 439
Query: 563 MALSGCQLDQTKHAWLL 579
M+ GC D + L+
Sbjct: 440 MSEKGCTRDSYCYNALI 456
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 121/563 (21%), Positives = 228/563 (40%), Gaps = 80/563 (14%)
Query: 74 AKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVL-DDDV 132
KS L+ PW + ++ S S E D R+ L +L F +++VL D++
Sbjct: 56 VKSNRNLLPSPW--VSQILNLLDGSASMESNLDGFCRKFLIKLSPNF---VSFVLKSDEI 110
Query: 133 QLGSDYFAKNVEW-HPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMF--- 188
+ D W +K++ E LVD L+ AK+ +R ++ F
Sbjct: 111 REKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLA----LAKDVDRIRFVSSEIKKFEFP 166
Query: 189 -TEGQMLKLLKGLGDKGSWRQAMSVLDWVY-GLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
T L+K G G + + WV+ +K+ + + Y L+ L A
Sbjct: 167 MTVSAANALIKSFGKLGMVEELL----WVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS 222
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A R+F +M E + PDI Y+++ + G QK +++++M +
Sbjct: 223 AERVFEVM-ESGRIKPDIVTYNTMIKGYCKAG-----------QTQKAMEKLRDMETRGH 270
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
E D + Y ++ AC + +++++ + G++ + L + + + GK +
Sbjct: 271 ----EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLN 326
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ F M + G Y VL+ + + G + +A+ + M G Y +
Sbjct: 327 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 386
Query: 427 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM------DG----GHIDDCIS 476
LC NGR ++A+ + F GL I+SM DG G +D+
Sbjct: 387 NGLCKNGRVEEALDYFHTCR-----------FDGLAINSMFYSSLIDGLGKAGRVDEAER 435
Query: 477 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF---EETTRANSSGYTF---LSGD 529
+F+ M + C + NA++ ++++ +A LF EE + + YT+ LSG
Sbjct: 436 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 495
Query: 530 GAPLKPDEY--TYSSMLEASATAHQWEYFEYVYKGMALSG-----CQ-LDQTKHAWLLVE 581
+ +E + M++ T F + G+ LSG C+ LD+ ++++
Sbjct: 496 FKEHRNEEALKLWDMMIDKGITPTA-ACFRALSTGLCLSGKVARACKILDELAPMGVILD 554
Query: 582 ASRAGKCHLLEHAFDSLLEAGEI 604
A+ E ++L +AG I
Sbjct: 555 AA-------CEDMINTLCKAGRI 570
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 21/220 (9%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLK-DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
++ GL G +A LD+ + + D + S F Y+ L+ LGKAGR EA R+F M
Sbjct: 385 VVNGLCKNGRVEEA---LDYFHTCRFDGLAINSMF-YSSLIDGLGKAGRVDEAERLFEEM 440
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E D Y+++ + + E + L +RM ++ + +
Sbjct: 441 SEK-GCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG--------------CDQTV 485
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRK 374
Y +L+ H+ + ++ + G+ P+AA + + SGK + +
Sbjct: 486 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 545
Query: 375 MAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRG 414
+A G + A + ++ + G+I EA + +RG
Sbjct: 546 LAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERG 584
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/469 (19%), Positives = 202/469 (43%), Gaps = 47/469 (10%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQM-LKLLKGLGDKGSWRQAMSVLD 214
E + +V LS+ W + M ++ E ++ + L++ ++A+ VLD
Sbjct: 132 EVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLD 191
Query: 215 WV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+ YGL+ +V+ LL L K G EA ++F M E P++ + S+
Sbjct: 192 EMPKYGLE-----PDEYVFGCLLDALCKNGSVKEASKVFEDMRE--KFPPNLRYFTSLLY 244
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
+ G L E +++ +M++ LEPD+VV+ +L+ + +
Sbjct: 245 GWCREGKLMEAKEVLVQMKEAG---------------LEPDIVVFTNLLSGYAHAGKMAD 289
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMEVMLQSGK-YDLVHEFFRKMAKSGEAIGALTYKVLV 391
+ + +RK G +P+ Y + ++ + ++ K D F +M + G +TY L+
Sbjct: 290 AYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Query: 392 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 451
F + G I++ + + +M ++GV+ + Y ++ ++++ + ++EK+K R
Sbjct: 350 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKR-RGC 408
Query: 452 KPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKE 510
P + + +I + G + + + ++ M+ + P + T M+ ++ +A
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 511 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA--LSGC 568
F+E + G P T S+L + E + V+ ++ S C
Sbjct: 469 HFKE-----------MVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSC 517
Query: 569 QLDQTKHAWLLVEASRAGKCHLLE---HAFDSLLEAGEIPHPLFFTEML 614
+L+ + AW + + K H+ E + D ++E +P P + +++
Sbjct: 518 ELNVS--AWTIWIHALYAKGHVKEACSYCLD-MMEMDLMPQPNTYAKLM 563
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 149/391 (38%), Gaps = 63/391 (16%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
E E VL+ R + M K + + M + GL E LL L GS ++A V
Sbjct: 166 EPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVF 225
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ +++K R+ +T LL + G+ EA + + +++ L PDI + ++
Sbjct: 226 E---DMREKFPPNLRY-FTSLLYGWCREGKLMEAKEVL-VQMKEAGLEPDIVVFTNLLSG 280
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMH----------RKNWDPVL-----------EP 312
G + + L+ MR++ + N + K D + E
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEA 340
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFF 372
D+V Y A+++ + V +RK G+ PS TY M + +++ E
Sbjct: 341 DIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELI 400
Query: 373 RKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 432
KM + G L Y V++R + G++ EAV ME G+ + + N
Sbjct: 401 EKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTF-----VIMIN 455
Query: 433 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS--IFQHMKDHCEPNIG 490
G T G +I + + H + +S IF P G
Sbjct: 456 G----------------------FTSQGFLIEACN--HFKEMVSRGIFS------APQYG 485
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSS 521
T+ ++L R+D AK+++ + SS
Sbjct: 486 TLKSLLNNLVRDDKLEMAKDVWSCISNKTSS 516
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 135/333 (40%), Gaps = 21/333 (6%)
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
K+ D L D+ A++N C VF ++ GL P+ TY M G
Sbjct: 30 KSGDAAL--DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHG 87
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
+ + F +M + G TY L+ + G+ A + M RG+V Y
Sbjct: 88 QREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYN 147
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 483
L LC +G+ DA +++ +++ ++P ITF L+ G + + + F MK
Sbjct: 148 TLIAGLCRHGKLWDAAKLLDMMRT-EGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKA 206
Query: 484 HC-EPNIGTVNAMLKVYSR-NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 541
+P+ T N ++ + R DM + L + R L+P + TY+
Sbjct: 207 AGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG--------------LEPTKVTYT 252
Query: 542 SMLEASATA-HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
++++ A H + FE + GM +G ++D + L+ G F S+ E
Sbjct: 253 ILIDSFARENHMGKAFE-ILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGE 311
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 633
G P + + M+ + + KA+ LI M
Sbjct: 312 KGVEPSNVIYDMMIYGYGREGSSYKALKLIMEM 344
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + +A S+ D + R++ S Y L+A L + G+ +A ++ ++M + P
Sbjct: 122 GEFERARSLFDEMPVRGIVRNVVS---YNTLIAGLCRHGKLWDAAKLLDMMRTE-GTRPS 177
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSK-----------RIKNMHRKNW--- 306
I ++ + G+ G + + +M+ +PS R ++M R N
Sbjct: 178 IITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALS 237
Query: 307 ---DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSG 363
+ LEP V Y ++++ + F + + K+GL+ A TYG+ + + G
Sbjct: 238 DMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEG 297
Query: 364 KYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 423
+ F+ M + G + Y +++ + EG +A+ + M Q+G++ ++ Y
Sbjct: 298 NMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYG 357
Query: 424 ELACCLCNNGRWQDAMLVVEKIKSLR 449
LC + + Q+A +++ ++++R
Sbjct: 358 LTIRVLCKDDKCQEAEALLDDMETIR 383
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/392 (19%), Positives = 154/392 (39%), Gaps = 35/392 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G A+ + D + G + ++ + Y L+ L K G + A+R+ M
Sbjct: 145 LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT---YGTLINGLCKVGNTNAAIRLLRSM- 200
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E N PD+ Y S+ +L + + E L +M + + PD+
Sbjct: 201 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG---------------ISPDIF 245
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y +++++ +WK V + Q+ S + P + ++ + + GK H+ M
Sbjct: 246 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 305
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G +TY L+ + +++EAV M G Y L C R
Sbjct: 306 IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 365
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNA 494
A + E++ + P +T+ L + G + D I++F M H + P++ T
Sbjct: 366 DKATYLFEEMCQ-KELIPNTVTYNTL-MHXCHVGRLQDAIALFHEMVAHGQIPDLATYRI 423
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+L + +A L + +G+ + PD Y+ +++ A + E
Sbjct: 424 LLDYLCKKSHLDEAMALLKTI-------------EGSNMDPDIQIYTIVIDGMCRAGELE 470
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
++ ++ G + + + ++ R G
Sbjct: 471 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRG 502
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 137/382 (35%), Gaps = 56/382 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
P V +N +L + + Q+ VF + Q+ G+ P T + + +
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
K+ K G T+ L+R EGKI +A+ M G Y L LC
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 491
G A I+ LR SM+ G+ C+P++
Sbjct: 187 VGNTNAA------IRLLR---------------SMEQGN--------------CQPDVVV 211
Query: 492 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 551
+++ ++ ++A LF + G + PD +TY+S++ +
Sbjct: 212 YTSIIDSLCKDRQVTEAFNLFSKMV-------------GQGISPDIFTYTSLIHSLCNLC 258
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+W++ + M S D + ++ + GK D ++ G P+ + +
Sbjct: 259 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYN 318
Query: 612 EMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISR-DKLEKLLNA 667
++ +QS ++AV + + M YAP I+ + +I R DK L
Sbjct: 319 ALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYC----KIQRMDKATYLFEE 374
Query: 668 LCNCNAASSEITVSNLSRALHA 689
+C + +T + L H
Sbjct: 375 MCQKELIPNTVTYNTLMHXCHV 396
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 137/363 (37%), Gaps = 57/363 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
+ PD+ N ++N+ ++ F V ++ K G +P AT+ + + GK
Sbjct: 100 IPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDAL 159
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
F KM G +TY L+ + G N A+ +R+MEQ VY + L
Sbjct: 160 HLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSL 219
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI---------------ISSMDGGHIDDC 474
C + + +A + K+ + P T+T LI ++ M I
Sbjct: 220 CKDRQVTEAFNLFSKMVG-QGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 278
Query: 475 ISIFQHMKD---------------------HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 513
+ IF + D EPN+ T NA++ + +A ++F+
Sbjct: 279 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 338
Query: 514 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ---L 570
+GY P+ +Y++++ + + Y+++ M CQ +
Sbjct: 339 TMVH---NGY----------APNVISYNTLINGYCKIQRMDKATYLFEEM----CQKELI 381
Query: 571 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 630
T L+ G+ F ++ G+IP + +L +S+ ++A+AL+
Sbjct: 382 PNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 441
Query: 631 NAM 633
+
Sbjct: 442 KTI 444
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GR +A+ +F+ M+ + PD+A Y + L + L E + L+ K
Sbjct: 396 VGRLQDAIALFHEMVAHGQI-PDLATYRILLDYLCKKSHLDEAMALL-----------KT 443
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
+ N DP D+ +Y V++ + + + +F L GL+P+ TY + + +
Sbjct: 444 IEGSNMDP----DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 499
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGV---VG 417
+ G D ++ F +M +G + TY + + + + A+ ++ M RG V
Sbjct: 500 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVS 559
Query: 418 TASVYYELAC 427
T ++ E+ C
Sbjct: 560 TTTLLVEMLC 569
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 133/298 (44%), Gaps = 21/298 (7%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ V D V ++ K L + ++ +A + EA+ FN+M + ++ P++AA
Sbjct: 92 RQYQIVWDLVSAMRKKGMLNVE-TFCIMMRKYARANKVDEAVYTFNVM-DKYDVVPNLAA 149
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
++ + L + +++ ++ + M+ + PD Y+ +L
Sbjct: 150 FNGLLSALCKSNNVRKAQEIFDAMKGQ----------------FVPDEKSYSILLEGWGK 193
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+ VF+++ ++G P TYG+ ++V+ ++G+ D E ++M +
Sbjct: 194 APNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFI 253
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
Y VLV + E +I +A+ M ++G+ Y L C ++++ V+++++
Sbjct: 254 YSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEME 313
Query: 447 SLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRND 503
S P T +IISSM G G D +F M CEP+ T M+K++ +
Sbjct: 314 S-NGVAPNSRT-CNVIISSMIGQGQTDRAFRVFCRMIKLCEPDADTYTMMIKMFCEKN 369
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 132/315 (41%), Gaps = 64/315 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L + R+A + D + G + D KS Y+ LL GKA A +F M+
Sbjct: 153 LLSALCKSNNVRKAQEIFDAMKG-QFVPDEKS---YSILLEGWGKAPNLPRAREVFREMV 208
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKRIKNM--------HR 303
E C+ PD+ Y + L + G + E V++++ M +P+ I ++ HR
Sbjct: 209 EAGCD--PDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHR 266
Query: 304 --KNWDPVLE-------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL--------- 345
D LE D+V YNA++ A +++K V V K++ +G+
Sbjct: 267 IEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNV 326
Query: 346 -------------------------KPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGE 380
+P A TY + +++ + + ++ + ++ M KS +
Sbjct: 327 IISSMIGQGQTDRAFRVFCRMIKLCEPDADTYTMMIKMFCEKNELEMALKIWKYM-KSKQ 385
Query: 381 AIGAL-TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 439
+ ++ T+ L++ E+ +A + M ++G+ + + L L GR +D +
Sbjct: 386 FVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGR-EDVL 444
Query: 440 LVVEKIKSLRHSKPL 454
+ + +L +PL
Sbjct: 445 KFLHEKMNLLVKEPL 459
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 19/179 (10%)
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGG 469
+QRG + Y+ + L ++Q +V + + ++R L + TF ++
Sbjct: 70 KQRGYSHSIRAYHLMIESLAKIRQYQ---IVWDLVSAMRKKGMLNVETFCIMMRKYARAN 126
Query: 470 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+D+ + F M + PN+ N +L +++ KA+E+F+
Sbjct: 127 KVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMK------------ 174
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
PDE +YS +LE A V++ M +GC D + ++ +AG+
Sbjct: 175 --GQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGR 231
>gi|297839813|ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
Length = 832
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 165/389 (42%), Gaps = 22/389 (5%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN V+ + + + F FK+ ++SG K TY M + L G E + M
Sbjct: 242 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 301
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
K+ + TY++++ + + G+++ A + M++R + + SV+ L + GR
Sbjct: 302 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 361
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 495
+M V +++ H +P F LI S G +D + ++ M K PN G +
Sbjct: 362 TSMKVYMEMQGFGH-RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 420
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
++ ++++ A +F++ +A FL P TYS +LE A + Q +
Sbjct: 421 IESHAKSGKLEVAMSVFKDMEKAG-----FL--------PTPSTYSCLLEMHAGSGQVDS 467
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP--LFFTEM 613
+Y M +G + + + LL + L++ A LLE + + + +++
Sbjct: 468 AMKIYNSMTNAGLRPGLSSYISLLTLLANK---RLVDVAGKILLEMKAMGYSVDVCASDV 524
Query: 614 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNA 673
L+ I ++ + A+ + M + +LFES D LL L + +A
Sbjct: 525 LMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVH-SA 583
Query: 674 ASSEITVSNLSRALHALCRSE-KERDLSS 701
++ + A C+ E KER L S
Sbjct: 584 GKVDLVLYTSILAHLVRCQDEDKERQLMS 612
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 130/293 (44%), Gaps = 21/293 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ L K+GR A ++F M E L P + + S+ ++G+ G L +K+ M
Sbjct: 312 YELIIPSLAKSGRLDAAFKLFQQMKER-KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 370
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ HR P ++ +++++ + + ++ +++KSG +P+
Sbjct: 371 QGFG-------HR--------PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFG 415
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
Y + +E +SGK ++ F+ M K+G TY L+ G+++ A+ +M
Sbjct: 416 LYTMIIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 475
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
G+ S Y L L N A ++ ++K++ +S +++ + +++ +
Sbjct: 476 TNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYS--VDVCASDVLMIYIKDAS 533
Query: 471 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 522
+D + + M + N + + + +N ++ A+ L E T +S+G
Sbjct: 534 VDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLE--TLVHSAG 584
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 112/259 (43%), Gaps = 15/259 (5%)
Query: 348 SAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAV 407
S Y ++ + ++ K ++ F+K +SG I TY L+ F +G +A
Sbjct: 238 SFGAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 297
Query: 408 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 467
+ME+ + S Y + L +GR A + +++K R +P F+ L+ S
Sbjct: 298 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKE-RKLRPSFSVFSSLVDSMGK 356
Query: 468 GGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 526
G +D + ++ M+ P+ +++ Y++ A L++E + SG+
Sbjct: 357 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKK---SGF--- 410
Query: 527 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 586
+P+ Y+ ++E+ A + + E V+K M +G + ++ LL + +G
Sbjct: 411 -------RPNFGLYTMIIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSG 463
Query: 587 KCHLLEHAFDSLLEAGEIP 605
+ ++S+ AG P
Sbjct: 464 QVDSAMKIYNSMTNAGLRP 482
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 150/356 (42%), Gaps = 34/356 (9%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI Y+++ ++G L KL+ + + N LEP+++ Y ++
Sbjct: 50 PDIVTYNTLMNGFCKIGDLFTAKKLMGEIS------LVN---------LEPNVITYTTLI 94
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+A S + +++ ++ L P TY M + +SGK + FR+M + G
Sbjct: 95 DAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVV 154
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA--M 439
+Y L+ + ++EG + EA M RG+ VY L L G +A M
Sbjct: 155 PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDM 214
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKV 498
V +SL P +T++ LI G ++ + Q M++ H PN+ ++++
Sbjct: 215 FQVLLEESLV---PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDG 271
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
Y++ + ++A ++ + + N + P+ + Y ++++ A Q
Sbjct: 272 YTKKGLLNEAMDVMRKMVQRN-------------ILPNVFVYGTLIDGYFKADQRGIALD 318
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++K M G + + + R+G+ + F ++ G +P + +T M+
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/439 (17%), Positives = 172/439 (39%), Gaps = 65/439 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLED----------------CNL------------- 260
VYT L+ L KAG + A +F ++LE+ C L
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253
Query: 261 -----YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+P++ Y S+ + GLL E + ++ +M Q+ + P++
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN---------------ILPNVF 298
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VY +++ + Q +FK+++ GL+ + + + +SG+ + E F+ M
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G + Y ++ F++ GK ++A + M ++ Y L L G++
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY 418
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+ ++ L + P TF +I + G++ + + + MK + +PN T N
Sbjct: 419 ESESFHT-GMRQLGLA-PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+++ K +L + P T+ ++L+AS+ + + +
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMG-------------FHPTPTTHKAVLDASSKSRRAD 523
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+++ + G +LD + + L+ R G F ++ G + + + ++
Sbjct: 524 VILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALI 583
Query: 615 IQAIVQSNYEKAVALINAM 633
+ S+ +KA A+ + M
Sbjct: 584 HGYCISSHLKKAFAVHSQM 602
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/497 (18%), Positives = 187/497 (37%), Gaps = 45/497 (9%)
Query: 142 NVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLK 198
N HPE R E VL+D ++ + + M G + T ++
Sbjct: 6 NTYQHPE--IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFC 63
Query: 199 GLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLED 257
+GD + ++ M + V +L+ + YT L+ K+ +AL +++ M
Sbjct: 64 KIGDLFTAKKLMGEISLV-------NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVK 116
Query: 258 CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVY 317
+L PD+ Y + L + G ++E K++ R+ + + P+ Y
Sbjct: 117 -SLVPDVVTYTCIMNGLCKSGKVEE---------------AKSVFREMEEVGVVPNRFSY 160
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
++++ F + ++ G+ Y M+ + ++G + + F+ + +
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE 220
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+TY L+ + G +N+ ++ ME++ + VY + G +
Sbjct: 221 ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNE 280
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 496
AM V+ K+ R+ P + LI + +F+ MK E N +++ +
Sbjct: 281 AMDVMRKMVQ-RNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
R+ +A ELF++ S G L PD Y+SM++ A +
Sbjct: 340 NNLKRSGRMEEADELFKDMM---SRG----------LLPDRVNYTSMMDGFFKAGKESDA 386
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
+ + M D + L+ + GK + E + + G P F M+
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINA 445
Query: 617 AIVQSNYEKAVALINAM 633
+ N A+ L+N M
Sbjct: 446 YCKEGNLGNALKLLNEM 462
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 127/360 (35%), Gaps = 59/360 (16%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRI---------------------------------F 251
L R YT ++ KAG+ +A I F
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESF 423
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMH------ 302
+ + L PD A ++++ + G L +KL+ M+ KP+ N+
Sbjct: 424 HTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCA 483
Query: 303 ----RKNWDPV-------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K D + P + AVL+A S + + + QL G+K +T
Sbjct: 484 AGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLST 543
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + + G F+ M G +TY L+ + + +A A M
Sbjct: 544 YNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQML 603
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
GV Y L L ++A +V ++K R P T+ L+ G++
Sbjct: 604 TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE-RGLVPNATTYDILVSGHGKIGNM 662
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFL 526
+C+ ++ M P T N ++ +++ S+AKEL +E NSS Y L
Sbjct: 663 KECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 19/214 (8%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
D + G+ K DL + Y L++ + G A +F M+ + DI Y+++
Sbjct: 530 DQLVGMGVKLDLST---YNTLISTFCRLGMIRRATLVFKDMMGK-GILADIITYNALIHG 585
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
LK+ + H + + P++ YN +L + K
Sbjct: 586 YCISSHLKKAFAV---------------HSQMLTEGVSPNVETYNILLGGLSAARLIKEA 630
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ Q+++ GL P+A TY + + + G + + +M G TY VL+
Sbjct: 631 AGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISC 690
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
F + K+++A ++ M+ RG+ +S Y L C
Sbjct: 691 FAKGKKMSQAKELMQEMQVRGIPPNSSTYDILIC 724
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 159/389 (40%), Gaps = 42/389 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G A+ VLD + + + YT LL K +A+++ + M
Sbjct: 162 LIRGLCGRGRTGNALVVLD---DMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
PDI Y+ V + Q G + + IE ++ PS EP+ V
Sbjct: 219 AK-GCAPDIITYNVVVNGICQEGRVDDA---IEFLKSLPSHGC------------EPNTV 262
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
YN VL + +W+ + ++ + G P+ T+ + + + + G + E ++
Sbjct: 263 SYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
K G +L+Y ++ AF ++ K++ A+A V M RG Y L LC G
Sbjct: 323 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEV 382
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 494
A+ ++ ++K + P+ I++ +I G + + + M +P+I T +
Sbjct: 383 DAAVELLHQLKD-KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYST 441
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA----TA 550
+ R D EE RA F ++P+ Y+++L T
Sbjct: 442 ISSGLCREDR-------IEEAIRA------FCKVQDMGIRPNTVLYNAILLGLCKRRETH 488
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ + F Y M +GC +++ + L+
Sbjct: 489 NAIDLFIY----MISNGCMPNESTYTILI 513
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 154/392 (39%), Gaps = 42/392 (10%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
L+GL +G +A+ +++ + GL+ + L+ L +GR EA R+ L
Sbjct: 66 LRGLVRRGDLEEALRLVESMSGLEPS---AAPGPCAALIKKLCASGRTAEARRV----LA 118
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
C PD+ AY+++ G L +L+ M +EPD
Sbjct: 119 ACE--PDVMAYNAMVAGYCVTGQLDAARRLVADMP------------------MEPDSYT 158
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMA 376
YN ++ + V + + G P TY + +E + Y + +M
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218
Query: 377 KSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 436
G A +TY V+V +EG++++A+ ++++ G Y + LC RW+
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278
Query: 437 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 495
DA ++ ++ S + P +TF LI G ++ + + + + C PN + N +
Sbjct: 279 DAEKLMAEM-SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337
Query: 496 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 555
L + + +A E + G PD +Y+++L A + +
Sbjct: 338 LHAFCKQKKMDRAMAFVE-----------LMVSRGC--YPDIVSYNTLLTALCRGGEVDA 384
Query: 556 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
+ + GC + ++ ++AGK
Sbjct: 385 AVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 416
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 106/272 (38%), Gaps = 32/272 (11%)
Query: 171 TAKNW----KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRD 224
TA+ W K + M+Q G L+ L +G AM VLD + YG
Sbjct: 273 TAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCT---- 328
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ Y +L K + A+ LM+ YPDI +Y+++ L + G + V
Sbjct: 329 -PNSLSYNPILHAFCKQKKMDRAMAFVELMVSR-GCYPDIVSYNTLLTALCRGGEVDAAV 386
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPV--------------------LEPDLVVYNAVLNAC 324
+L+ +++ K + + D + L+PD++ Y+ + +
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + F +++ G++P+ Y + + + + + F M +G
Sbjct: 447 CREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNE 506
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVV 416
TY +L+ EG + EA + + RGVV
Sbjct: 507 STYTILIEGLTYEGLVKEARELLGELCSRGVV 538
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 19/220 (8%)
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT 232
+ FV +M G LL L G A+ +L + LKDK Y
Sbjct: 349 RAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELL---HQLKDKGCTPVLISYN 405
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
++ L KAG+ EAL + N M+ L PDI Y +++ L + ++E ++ +++
Sbjct: 406 TVIDGLTKAGKTKEALELLNEMVTK-GLQPDIITYSTISSGLCREDRIEEAIRAFCKVQ- 463
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
D + P+ V+YNA+L + +F + +G P+ +TY
Sbjct: 464 --------------DMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTY 509
Query: 353 GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVR 392
+ +E + G E ++ G L K +R
Sbjct: 510 TILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIR 549
>gi|357140802|ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Brachypodium distachyon]
Length = 501
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 138/359 (38%), Gaps = 66/359 (18%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y ++ + + G R+ M E+ L +H + T GQ GL + +L+ER
Sbjct: 178 MYNLVMKVFAQCGEVKAMWRLLEEMTEN-GLSISARTFHLLICTCGQAGLRR---RLVER 233
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ S N+ P +NA+L+ + Q+ + WV +++ G P
Sbjct: 234 FIKSSSF--------NYRPFRNS----FNAILHTLLTIEQYSLIEWVHQKMLMEGHSPDV 281
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + M GK D H +M K+G TY +L+ GK ++ +AA+
Sbjct: 282 LTYNIVMRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVL---GKGDKPLAALNL 338
Query: 410 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 469
+ VG P + FT LI G
Sbjct: 339 LNYMSDVGCV---------------------------------PSVLHFTNLIDGLSRAG 365
Query: 470 HIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 528
+++ C F + MK CEP++ M+ Y +A++LF++ + G
Sbjct: 366 NLEACKYFFDEMMKKGCEPDVVCYTVMITGYVAAAELEEAQKLFDDM---------LVRG 416
Query: 529 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 587
P+ YTY++M+ +++ + K M L GC + + ++ L+ AGK
Sbjct: 417 K----LPNVYTYNTMIRGLCIVGEFDKACSMLKDMDLRGCTPNFSVYSTLVCRLRNAGK 471
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL--VKLIERMRQKPSKRIKNMHRKNW-- 306
+N+++ + + +H + +G+ GL +L ++ + K K + ++ N+
Sbjct: 284 YNIVMRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVLGKGDKPLAALNLLNYMS 343
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYD 366
D P ++ + +++ + + + F ++ K G +P Y + + + + + +
Sbjct: 344 DVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDEMMKKGCEPDVVCYTVMITGYVAAAELE 403
Query: 367 LVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 426
+ F M G+ TY ++R G+ ++A + +++M+ RG SVY L
Sbjct: 404 EAQKLFDDMLVRGKLPNVYTYNTMIRGLCIVGEFDKACSMLKDMDLRGCTPNFSVYSTLV 463
Query: 427 CCLCNNGRWQDAMLVVE 443
C L N G+ +A V++
Sbjct: 464 CRLRNAGKDAEANNVIK 480
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 16/185 (8%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL +LGK +P AL + N M D P + + ++ L + G L+ +
Sbjct: 318 TYNILLHVLGKGDKPLAALNLLNYM-SDVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDE 376
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +K EPD+V Y ++ V + + + +F + G P+
Sbjct: 377 MMKKGC---------------EPDVVCYTVMITGYVAAAELEEAQKLFDDMLVRGKLPNV 421
Query: 350 ATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRN 409
TY + + G++D + M G Y LV GK EA ++
Sbjct: 422 YTYNTMIRGLCIVGEFDKACSMLKDMDLRGCTPNFSVYSTLVCRLRNAGKDAEANNVIKY 481
Query: 410 MEQRG 414
M +G
Sbjct: 482 MANKG 486
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 127/326 (38%), Gaps = 18/326 (5%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLV 368
VL +V ++V P +K W +Q G S Y L M+V Q G+ +
Sbjct: 139 VLSRIVVSVDSVNRERFPRLAYKFFLWAGQQ---EGYHHSTGMYNLVMKVFAQCGEVKAM 195
Query: 369 HEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 428
+M ++G +I A T+ +L+ + G V + + +
Sbjct: 196 WRLLEEMTENGLSISARTFHLLICTCGQAGLRRRLVERFIKSSSFNYRPFRNSFNAILHT 255
Query: 429 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 487
L ++ V +K+ HS P +T+ ++ + G +D + M K+ P
Sbjct: 256 LLTIEQYSLIEWVHQKMLMEGHS-PDVLTYNIVMRAKYMLGKLDQFHRLLDEMGKNGLTP 314
Query: 488 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 547
++ T N +L V + D A L ++S G P ++++++
Sbjct: 315 DLHTYNILLHVLGKGDKPLAALNLL-----------NYMSDVGCV--PSVLHFTNLIDGL 361
Query: 548 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 607
+ A E +Y + M GC+ D + ++ A + + FD +L G++P+
Sbjct: 362 SRAGNLEACKYFFDEMMKKGCEPDVVCYTVMITGYVAAAELEEAQKLFDDMLVRGKLPNV 421
Query: 608 LFFTEMLIQAIVQSNYEKAVALINAM 633
+ M+ + ++KA +++ M
Sbjct: 422 YTYNTMIRGLCIVGEFDKACSMLKDM 447
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/422 (19%), Positives = 167/422 (39%), Gaps = 41/422 (9%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+T L+ L + GR EA+ + + M+E+ L PD Y + + ++G + L+
Sbjct: 183 LTFTTLMNGLCREGRVVEAVALLDRMVEN-GLQPDQITYGTFVDGMCKMGDTVSALNLLR 241
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M + ++P++V+Y+A+++ + +F +++ G+ P+
Sbjct: 242 KMEEISH--------------IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
TY + SG++ ++M + + +TY L+ AF +EGK EA
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 468
M RG++ Y + C R DA + + + + P TFT LI
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRL-DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406
Query: 469 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
IDD + + M + N T N ++ + + A +L ++ SSG
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI---SSGVC--- 460
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM-----------ALSGCQLDQTKHA 576
PD T +++L+ + + ++K M +G + D +
Sbjct: 461 -------PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 577 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 636
L+ GK E ++ + G +P + ++ M+ QS ++A + +M
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573
Query: 637 PF 638
F
Sbjct: 574 SF 575
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 131/328 (39%), Gaps = 39/328 (11%)
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+L+ + RM ++P I ++++K + D+ + ++ + F +
Sbjct: 84 FNKLMGAVVRM-ERPDLVI-SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGK 141
Query: 340 LRKSGLKPSAATY-----GLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAF 394
L K GL P T+ GL ++ + S DL H+ R LT+ L+
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCLDHRV-SEALDLFHQICRP--------DVLTFTTLMNGL 192
Query: 395 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 454
EG++ EAVA + M + G+ Y +C G A+ ++ K++ + H KP
Sbjct: 193 CREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPN 252
Query: 455 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA----K 509
+ ++ +I G D ++F M+D PNI T N M+ + + +S A +
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312
Query: 510 ELFEETTRANSSGYTFLSG---------DGAPLK---------PDEYTYSSMLEASATAH 551
E+ E N Y L + A L P+ TY+SM++
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372
Query: 552 QWEYFEYVYKGMALSGCQLDQTKHAWLL 579
+ + E ++ MA GC D L+
Sbjct: 373 RLDAAEDMFYLMATKGCSPDVFTFTTLI 400
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 88/195 (45%), Gaps = 5/195 (2%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ G + AL + M+ + PDI +++ L G LK+ +++ + M
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISS-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK + H N +EPD++ YN ++ + ++ +++++ G+ P
Sbjct: 490 -QKSKMDLDASHPFNG---VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY ++ + + + D + F M + +T+ L+ + + G++++ + M
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM 605
Query: 411 EQRGVVGTASVYYEL 425
+RG+V A +Y L
Sbjct: 606 GRRGIVADAIIYITL 620
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 89/218 (40%), Gaps = 13/218 (5%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-----------GLKPSAATYGLAMEVML 360
PD+V N +L+ + + K +FK ++KS G++P TY + + ++
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
GK+ E + +M G +TY ++ ++ +++EA +M +
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
+ L C GR D + + ++ R I + LI G+I+ + IFQ
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGR-RGIVADAIIYITLIYGFRKVGNINGALDIFQE 639
Query: 481 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 517
M P+ T+ ML + + +A + E+ R
Sbjct: 640 MISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 62/335 (18%), Positives = 135/335 (40%), Gaps = 32/335 (9%)
Query: 327 SHQWKGV---FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIG 383
S++ KG+ +F + +S PS + M +++ + DLV ++KM +
Sbjct: 56 SYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCD 115
Query: 384 ALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 443
++ +L++ F K+ A++ + + G+ + L LC + R +A+ +
Sbjct: 116 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH 175
Query: 444 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN---IGT-VNAMLKV 498
+I +P +TFT L+ G + + +++ M ++ +P+ GT V+ M K+
Sbjct: 176 QI-----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230
Query: 499 ---YSRNDMFSKAKEL----------------FEETTRANSSGYTFLSGDGAPLKPDEYT 539
S ++ K +E+ + R + S F+ + P+ T
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
Y+ M+ + +W + + + M + + L+ + GK +D +L
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350
Query: 600 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
G IP+ + + M+ Q + A + MA
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 150/356 (42%), Gaps = 34/356 (9%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI Y+++ ++G L KL+ + + N LEP+++ Y ++
Sbjct: 50 PDIVTYNTLMNGFCKIGDLFTAKKLMGEIS------LVN---------LEPNVITYTTLI 94
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEA 381
+A S + +++ ++ L P TY M + +SGK + FR+M + G
Sbjct: 95 DAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVV 154
Query: 382 IGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA--M 439
+Y L+ + ++EG + EA M RG+ VY L L G +A M
Sbjct: 155 PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDM 214
Query: 440 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKV 498
V +SL P +T++ LI G ++ + Q M++ H PN+ ++++
Sbjct: 215 FQVLLEESLV---PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDG 271
Query: 499 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 558
Y++ + ++A ++ + + N + P+ + Y ++++ A Q
Sbjct: 272 YTKKGLLNEAMDVMRKMVQRN-------------ILPNVFVYGTLIDGYFKADQRGIALD 318
Query: 559 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
++K M G + + + R+G+ + F ++ G +P + +T M+
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/439 (17%), Positives = 171/439 (38%), Gaps = 65/439 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLED----------------CNL------------- 260
VYT L+ L KAG + A +F ++LE+ C L
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253
Query: 261 -----YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+P++ Y S+ + GLL E + ++ +M Q+ + P++
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN---------------ILPNVF 298
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
VY +++ + Q +FK+++ GL+ + + + +SG+ + E F+ M
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358
Query: 376 AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
G + Y ++ F++ GK ++A + M ++ Y L L G++
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY 418
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 494
+ ++ L + P TF +I + G++ + + + MK + +PN T N
Sbjct: 419 ESESFHT-GMRQLGLA-PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 495 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 554
+++ K +L + P T+ ++L+AS+ + + +
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMG-------------FHPTPTTHKAVLDASSKSRRAD 523
Query: 555 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
+ + + G +LD + + L+ R G F ++ G + + + ++
Sbjct: 524 VILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALI 583
Query: 615 IQAIVQSNYEKAVALINAM 633
+ S+ +KA A+ + M
Sbjct: 584 HGYCISSHLKKAFAVHSQM 602
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/497 (18%), Positives = 187/497 (37%), Gaps = 45/497 (9%)
Query: 142 NVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLK 198
N HPE R E VL+D ++ + + M G + T ++
Sbjct: 6 NTYQHPE--IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFC 63
Query: 199 GLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLED 257
+GD + ++ M + V +L+ + YT L+ K+ +AL +++ M
Sbjct: 64 KIGDLFTAKKLMGEISLV-------NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVK 116
Query: 258 CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVY 317
+L PD+ Y + L + G ++E K++ R+ + + P+ Y
Sbjct: 117 -SLVPDVVTYTCIMNGLCKSGKVEE---------------AKSVFREMEEVGVVPNRFSY 160
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAK 377
++++ F + ++ G+ Y M+ + ++G + + F+ + +
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE 220
Query: 378 SGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 437
+TY L+ + G +N+ ++ ME++ + VY + G +
Sbjct: 221 ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNE 280
Query: 438 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 496
AM V+ K+ R+ P + LI + +F+ MK E N +++ +
Sbjct: 281 AMDVMRKMVQ-RNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339
Query: 497 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 556
R+ +A ELF++ S G L PD Y+SM++ A +
Sbjct: 340 NNLKRSGRMEEADELFKDMM---SRG----------LLPDRVNYTSMMDGFFKAGKESDA 386
Query: 557 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 616
+ + M D + L+ + GK + E + + G P F M+
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINA 445
Query: 617 AIVQSNYEKAVALINAM 633
+ N A+ L+N M
Sbjct: 446 YCKEGNLGNALKLLNEM 462
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 126/360 (35%), Gaps = 59/360 (16%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRI---------------------------------F 251
L R YT ++ KAG+ +A I F
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESF 423
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMH------ 302
+ + L PD A ++++ + G L +KL+ M+ KP+ N+
Sbjct: 424 HTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCA 483
Query: 303 ----RKNWDPV-------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K D + P + AVL+A S + + QL G+K +T
Sbjct: 484 AGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLST 543
Query: 352 YGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNME 411
Y + + G F+ M G +TY L+ + + +A A M
Sbjct: 544 YNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQML 603
Query: 412 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 471
GV Y L L ++A +V ++K R P T+ L+ G++
Sbjct: 604 TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE-RGLVPNATTYDILVSGHGKIGNM 662
Query: 472 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFL 526
+C+ ++ M P T N ++ +++ S+AKEL +E NSS Y L
Sbjct: 663 KECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 19/214 (8%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
D + G+ K DL + Y L++ + G A +F M+ + DI Y+++
Sbjct: 530 DQLVGMGVKLDLST---YNTLISTFCRLGMIRRATLVFKDMMGK-GILADIITYNALIHG 585
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
LK+ + H + + P++ YN +L + K
Sbjct: 586 YCISSHLKKAFAV---------------HSQMLTEGVSPNVETYNILLGGLSAARLIKEA 630
Query: 334 FWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRA 393
+ Q+++ GL P+A TY + + + G + + +M G TY VL+
Sbjct: 631 AGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISC 690
Query: 394 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
F + K+++A ++ M+ RG+ +S Y L C
Sbjct: 691 FAKGKKMSQAKELMQEMQVRGIPPNSSTYDILIC 724
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 125/285 (43%), Gaps = 18/285 (6%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ ++ K G + +N ML D + P++ Y+S+ L + + + ++++ M
Sbjct: 15 YSTVINGFFKEGDLDKTYSTYNEML-DKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 73
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + PD + YN++++ S Q K K++R G++P
Sbjct: 74 VKSG---------------VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVV 118
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
TY M+ + ++G+ + F M K G TY L++ + +G + E + M
Sbjct: 119 TYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLM 178
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 470
+ G+ V+ L C + ++AMLV K++ + P +T+ +I G
Sbjct: 179 VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQ-QGLNPNAVTYGTVIDVLCKSGR 237
Query: 471 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 514
++D + F+ M D P+ N+++ D + KA+ELF E
Sbjct: 238 VEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLE 282
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 25/299 (8%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+KR ++ L + + K + + M +SG+M ++ G G +
Sbjct: 40 DKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 99
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ L + + D+ + Y L+ L K GR EA +IF+ M + L PDI Y
Sbjct: 100 EAIVFLKKMRSDGVEPDVVT---YNSLMDYLCKNGRCTEARKIFDSMTKR-GLKPDITTY 155
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ G L E+ L++ M + + P+ V++ ++ A
Sbjct: 156 GTLLQGYATKGALVEMHGLLDLMVRNG---------------IHPNHYVFSILVCAYAKQ 200
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
+ + VF ++R+ GL P+A TYG ++V+ +SG+ + +F +M G ++ Y
Sbjct: 201 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVY 260
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
L+ + K +A M RG+ + + + C GR V+E +K
Sbjct: 261 NSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR------VIESVK 313
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 125/324 (38%), Gaps = 15/324 (4%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEF 371
PD+V Y+ V+N + + ++ + P+ TY + + ++ D E
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 372 FRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 431
M KSG +TY +V F G+ EA+ ++ M GV Y L LC
Sbjct: 70 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129
Query: 432 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 490
NGR +A + + + R KP T+ L+ G + + + M ++ PN
Sbjct: 130 NGRCTEARKIFDSMTK-RGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 188
Query: 491 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 550
+ ++ Y++ + +A +F + + L P+ TY ++++ +
Sbjct: 189 VFSILVCAYAKQEKVEEAMLVFSKMRQQG-------------LNPNAVTYGTVIDVLCKS 235
Query: 551 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 610
+ E ++ M G + D + L+ K E F +L+ G +FF
Sbjct: 236 GRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFF 295
Query: 611 TEMLIQAIVQSNYEKAVALINAMA 634
++ + ++V L + M
Sbjct: 296 NSIIDSHCKEGRVIESVKLFDLMV 319
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 129/334 (38%), Gaps = 29/334 (8%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDL 367
P L P L +YN +L + + H+ V W++ + + + P T+ L + + +S +D
Sbjct: 109 PSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDH 168
Query: 368 VHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 427
+ F KM + G T +LVR G + +A+ V N + VY L
Sbjct: 169 ALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNN-NNSCRIANRVVYNTLVS 227
Query: 428 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE- 486
C +A +VE++ L P +TF I + G + + IF+ M+ E
Sbjct: 228 RFCREEMNNEAERLVERMNEL-GVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAEL 286
Query: 487 ----PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS----SGYTF----LSGDGAPL- 533
PN+ T N MLK + ++ M A+ L E + + Y L +G L
Sbjct: 287 GLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLE 346
Query: 534 -------------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
+P+ YTY+ M++ H + M +G D ++ LL
Sbjct: 347 ARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLH 406
Query: 581 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 614
GK + ++ G P+ +L
Sbjct: 407 GYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLL 440
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 135/370 (36%), Gaps = 54/370 (14%)
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
A +++D L M + + +M ++G+ LL G +G +A SVL
Sbjct: 363 AYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVL- 421
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ + + + LL L K GR EA + M E C PD + V L
Sbjct: 422 --HEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKC-YQPDTVTCNIVVNGL 478
Query: 275 GQVGLLKELVKLIERM-RQKPSKR---------IKNMHRKNWDPVLEPDLVVYNAVLNAC 324
+ G L + +++ M P+ I ++H N L PD + Y ++N
Sbjct: 479 CRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIH--NVSNCL-PDGITYTTLINGL 535
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
+ + F ++ L+P + TY + + GK + M ++G +
Sbjct: 536 CKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTL 595
Query: 385 LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
TY L+ +I E M+++G+ Y + CLC G+ +DA
Sbjct: 596 QTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDA------ 649
Query: 445 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 503
IS+ M D PN+ + ++K +S++
Sbjct: 650 ------------------------------ISLLHEMLDKGISPNVSSFKILIKAFSKSS 679
Query: 504 MFSKAKELFE 513
F A ELFE
Sbjct: 680 DFKVACELFE 689
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 76/427 (17%), Positives = 155/427 (36%), Gaps = 49/427 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNL---YPDIAAYHSVAVTLGQVGLLKELVKL 286
+ ++ L +AG+ EA RIF M D L P++ ++ + + G++ + L
Sbjct: 256 TFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGL 315
Query: 287 IERMRQKPS------------KRIKNMHRKNWDPVL--------EPDLVVYNAVLNACVP 326
+E M++ + ++N VL EP+ YN +++
Sbjct: 316 VETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCR 375
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALT 386
+H + + ++G+ P Y + GK +M ++G T
Sbjct: 376 NHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYT 435
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
L+ + W+EG+ EA ++ M ++ + LC NG A +V ++
Sbjct: 436 CNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMW 495
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFS 506
+ + P +S+D G+ + H +C P+ T ++ +
Sbjct: 496 T---NGP----------TSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLE 542
Query: 507 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 566
+AK+ F E N L+PD TY + + + + V K M +
Sbjct: 543 EAKKKFIEMLAKN-------------LRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERN 589
Query: 567 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 626
GC + L++ + + D + E G P + ++ + A
Sbjct: 590 GCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDA 649
Query: 627 VALINAM 633
++L++ M
Sbjct: 650 ISLLHEM 656
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 168/419 (40%), Gaps = 69/419 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y LL L KAG +A ++F M ++ C+ PD Y + G+ G + V L+
Sbjct: 219 FAYNMLLNALAKAGMVDQAYQVFEDMKQNYCD--PDAYTYTILIRMSGKAGKTTKFVSLL 276
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + VL +L+ YN V+ A + ++ ++ +S +P
Sbjct: 277 EEMVSEGC-------------VL--NLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRP 321
Query: 348 SAATYGLAMEVMLQSGKYDLVHE----------------FFRKMAKSGEAIGA------- 384
+ TY + ++V+ G+ ++E + + KSG A A
Sbjct: 322 NQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRM 381
Query: 385 ---------LTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 435
+ ++ A K EA+ + M ++G+ +Y + L G+
Sbjct: 382 WNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSAL---GKL 438
Query: 436 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG--GHIDDCISIFQHMKD-HCEPNIGTV 492
+ + ++R + + FT I+ S G G +D +F+ M+D C+P++ T
Sbjct: 439 KQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTY 498
Query: 493 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 552
N+M+ +N +A LF++ GY PD +TYS ++E +++
Sbjct: 499 NSMINCLGKNGDLDEAHMLFKDM---QEKGY----------DPDVFTYSILIECFGKSNK 545
Query: 553 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 611
+ ++ M GC + + LL R GK +++L + G P + ++
Sbjct: 546 VDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDSITYS 604
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 52/261 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K L G +A SV ++ +K D R+ + +L L A + EA+ + ++M
Sbjct: 361 LIKALCKSGHASEAHSVFCRMWNSHEKGD---RYAFVSMLEALCNAEKTTEAIDLLHMMP 417
Query: 256 E-----DCNLY-----------------------------PDIAAYHSVAVTLGQVGLLK 281
E D +Y PD+ Y+ + + G+VGL+
Sbjct: 418 EKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVD 477
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+ +L E M K PD+V YN+++N + +FK ++
Sbjct: 478 KASELFEEMEDGSCK---------------PDVVTYNSMINCLGKNGDLDEAHMLFKDMQ 522
Query: 342 KSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKIN 401
+ G P TY + +E +S K D+ F +M G +TY +L+ GK
Sbjct: 523 EKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTT 582
Query: 402 EAVAAVRNMEQRGVVGTASVY 422
EA ++Q+G+ + Y
Sbjct: 583 EAHKFYETLKQQGLTPDSITY 603
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 23/248 (9%)
Query: 149 KRWRSEAEAIRV----LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKG 204
+ W S + R +++ L E T + + +M + G+ G + LG
Sbjct: 380 RMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLK 439
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
S+ D ++ + F Y +++ G+ G +A +F M ED + PD+
Sbjct: 440 QVSFMSSLYDT---MRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEM-EDGSCKPDV 495
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y+S+ LG+ G L E L K+M K +DP D+ Y+ ++
Sbjct: 496 VTYNSMINCLGKNGDLDEAHMLF-----------KDMQEKGYDP----DVFTYSILIECF 540
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGA 384
S++ +F ++ G P+ TY + ++ + + GK H+F+ + + G +
Sbjct: 541 GKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDS 600
Query: 385 LTYKVLVR 392
+TY +L R
Sbjct: 601 ITYSILER 608
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 172/447 (38%), Gaps = 65/447 (14%)
Query: 229 FVYTKLLAIL-GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y ++L +L P EA+R+ M D V + V LL + +
Sbjct: 119 FSYNRILVLLFSNRADPAEAMRLIAEMERD-----------GVPGNISTVNLLVGMGVEV 167
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ-WKGVFWVFKQLRKSGLK 346
R SK W L + Y ++ A + S + WKG F V++++R+ G K
Sbjct: 168 GRCLDLASK---------WG--LRLNGYTYKCLVQAHLRSREVWKG-FEVYEKMRRKGYK 215
Query: 347 PSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAA 406
Y + + + ++G D ++ F M ++ A TY +L+R + GK + V+
Sbjct: 216 LDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSL 275
Query: 407 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 466
+ M G V Y + L N +A+ ++ K+ +P + T++ ++
Sbjct: 276 LEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIE-SDCRPNQFTYSIMLDVLS 334
Query: 467 DGGHIDDCISIFQHMKDHCEP--NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 524
GG + + D C N + ++K ++ S+A +F ++ G
Sbjct: 335 TGGQLHR----LNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKG-- 388
Query: 525 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 584
D Y + SMLEA A + + M G D + + +
Sbjct: 389 -----------DRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGK 437
Query: 585 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 644
+ + +D++ G +P ++ I+ S++ + V L++ +
Sbjct: 438 LKQVSFMSSLYDTMRANGVVP------DVFTYNIMISSFGR-VGLVD------------K 478
Query: 645 WTELFESNEDRISRDKLEKLLNALCNC 671
+ELFE ED + + N++ NC
Sbjct: 479 ASELFEEMEDGSCKPDVVT-YNSMINC 504
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 136/382 (35%), Gaps = 86/382 (22%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVML 360
M RK + + D+ YN +LNA + + VF+ ++++ P A TY + + +
Sbjct: 209 MRRKGY----KLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSG 264
Query: 361 QSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQR------- 413
++GK +M G + + Y ++ A + ++EA+ + M +
Sbjct: 265 KAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQF 324
Query: 414 ------GVVGTAS-------------------VYYELACCLCNNGRWQDAMLVVEKIKSL 448
V+ T VY L LC +G +A V ++ +
Sbjct: 325 TYSIMLDVLSTGGQLHRLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWN- 383
Query: 449 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK---------- 497
H K F ++ + + + I + M + ++G N +
Sbjct: 384 SHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSF 443
Query: 498 ----------------VYSRNDMFS---------KAKELFEETTRANSSGYTFLSGDGAP 532
V++ N M S KA ELFEE DG+
Sbjct: 444 MSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEME------------DGS- 490
Query: 533 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 592
KPD TY+SM+ + ++K M G D ++ L+ ++ K +
Sbjct: 491 CKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMAC 550
Query: 593 HAFDSLLEAGEIPHPLFFTEML 614
FD ++ G IP+ + + +L
Sbjct: 551 SLFDEMVAQGCIPNIVTYNILL 572
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 137/346 (39%), Gaps = 68/346 (19%)
Query: 367 LVHEFFRKMAKS--GEAIGALTY-KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY- 422
L FFR A S G A +Y ++LV F EA+ + ME+ GV G S
Sbjct: 99 LALSFFRFAATSLPGFRHDAFSYNRILVLLFSNRADPAEAMRLIAEMERDGVPGNISTVN 158
Query: 423 ------YELACCLCNNGRWQ----------------------DAMLVVEKIKSLRHSKPL 454
E+ CL +W V EK++ R L
Sbjct: 159 LLVGMGVEVGRCLDLASKWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMR--RKGYKL 216
Query: 455 EITFTGLIISSM-DGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELF 512
+I ++++++ G +D +F+ MK ++C+P+ T ++++ + +K L
Sbjct: 217 DIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLL 276
Query: 513 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 572
EE + +G L + Y++++EA + ++ M S C+ +Q
Sbjct: 277 EE-----------MVSEGCVL--NLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQ 323
Query: 573 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 632
++ +L S G+ H L D + +G + P++ LI+A+ +S +
Sbjct: 324 FTYSIMLDVLSTGGQLHRLNEILD--ICSGCLNRPVY--SYLIKALCKSGHASE------ 373
Query: 633 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEI 678
A++ F R W ++ ++ R +L ALCN + I
Sbjct: 374 -AHSVFC---RMW-----NSHEKGDRYAFVSMLEALCNAEKTTEAI 410
>gi|449455613|ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Cucumis sativus]
Length = 572
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 143/344 (41%), Gaps = 32/344 (9%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D ++Y+ + LG+ G ++ ++ NM R+ + LE + + V++
Sbjct: 177 DASSYNIILKALGRRGFFDSMMDVL-----------YNMTREGVEATLE----MVSIVVD 221
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAI 382
+ V HQ F+ L++ GLK T + ++ M + + FF + K
Sbjct: 222 SLVKGHQVSKALQFFRNLKEIGLKCDTETLNILLQCMCRRSHVGAANSFF-NLTKGNIPF 280
Query: 383 GALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 442
+TY +++ + G+ E ++ ME G + L CL + DA+ +
Sbjct: 281 NVMTYNIVIGGWSRYGRHGEVEQMLKAMELDGFSPDCLTHTYLIECLGRANQIDDAVKIF 340
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 501
+K+ P + +I + + G D C++ ++ M + CEP++ T + ++ + +
Sbjct: 341 DKMDE-NGCTPDVDAYNAMISNFICIGDFDQCLTYYERMLSNRCEPDMNTYSNLITGFLK 399
Query: 502 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 561
+ A E+F+E A + P +S ++ S + +YK
Sbjct: 400 AKKVADALEMFDEMV--------------ARIIPTTGAITSFIQLSCSYGPPHAAMLIYK 445
Query: 562 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 605
GC++ + + LL+ S GK +L + ++ + E+G P
Sbjct: 446 KARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWNEMQESGYDP 489
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+T L+ LG+A + +A++IF+ M E+ PD+ AY+++ +G + + E
Sbjct: 318 LTHTYLIECLGRANQIDDAVKIFDKMDEN-GCTPDVDAYNAMISNFICIGDFDQCLTYYE 376
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RM S R EPD+ Y+ ++ + + + +F ++ + + P+
Sbjct: 377 RML---SNRC------------EPDMNTYSNLITGFLKAKKVADALEMFDEM-VARIIPT 420
Query: 349 AATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVR 408
+++ G ++K K G I YK+L+ GK +
Sbjct: 421 TGAITSFIQLSCSYGPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWN 480
Query: 409 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 444
M++ G Y CLC G+ ++A+LV+E+
Sbjct: 481 EMQESGYDPDVETYEHAIDCLCKTGQLENAVLVMEE 516
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/353 (18%), Positives = 150/353 (42%), Gaps = 34/353 (9%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T++ +A E+L + M+E P + Y+++ + +E V+ + +
Sbjct: 316 FTEMQWACARARNSRESLGLLQAMIEQ-GCEPRLENYNALLCAYEKTANWEEAVRTVVWI 374
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++K PD + ++++L AC + Q + V ++++++ P+
Sbjct: 375 QEKG---------------FTPDFITWSSLLGACANAGQAEKAVAVMEKMKENNFTPNVV 419
Query: 351 TYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNM 410
++ ++ ++G ++ E F M SG + + L+ A+ + + + +
Sbjct: 420 SWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSAYEKGRQWKRVLYTIEKQ 479
Query: 411 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDG 468
E+ GV + L G+WQ L +KI+ ++ S +P +T++ LI + D
Sbjct: 480 EELGVKLDVVAWSTTISALAKAGQWQ---LAEKKIRQMKQSGCQPNIVTYSSLIKAYGDV 536
Query: 469 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 527
G + S+F+ M + P+ A+L+ Y++ K F+ + +
Sbjct: 537 GLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFD----------SMMP 586
Query: 528 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 580
G +KPD+Y Y+++ A T +W+ + M +GC D + L+
Sbjct: 587 RYG--IKPDKYAYAAIFWACWTCGEWQRAADYMENMEAAGCTPDTMIYTTLIT 637
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 168/426 (39%), Gaps = 71/426 (16%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRF--------------VYTKLLAILGKAGRPHEALRIFNL 253
++M+V+ W G D SR V T L+A+LG R EAL++F
Sbjct: 174 RSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEALKLFRW 233
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M E + I ++++ V G+ G V+L E M++ L PD
Sbjct: 234 M-EKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELG---------------LAPD 277
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFR 373
+ + +++A + +WK F L ++G G + + G++ +
Sbjct: 278 NITFRGLVSATTAAGKWKAAQ-SFINLMQAG--------GFSFAI----GEFTEMQWACA 324
Query: 374 KMAKSGEAIGAL-------------TYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 420
+ S E++G L Y L+ A+ + EAV V ++++G
Sbjct: 325 RARNSRESLGLLQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFI 384
Query: 421 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 480
+ L N G+ + A+ V+EK+K + P +++ L+ + G+ + IF
Sbjct: 385 TWSSLLGACANAGQAEKAVAVMEKMKE-NNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHS 443
Query: 481 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 539
M C PN N++L Y + + + YT + +K D
Sbjct: 444 MLNSGCPPNEVAWNSLLSAYEKGRQWKRVL-------------YTIEKQEELGVKLDVVA 490
Query: 540 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 599
+S+ + A A A QW+ E + M SGCQ + ++ L+ G + E F S+L
Sbjct: 491 WSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNKAESVFKSML 550
Query: 600 EAGEIP 605
G P
Sbjct: 551 LEGIRP 556
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 153/378 (40%), Gaps = 31/378 (8%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
LG+ A R+F ++ P+ ++ LG L E +KL M ++
Sbjct: 183 LGQMRNWDAASRVFR-AFRSASVEPNAHVCTTLIAVLGYGRRLPEALKLFRWMEKQG--- 238
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+E + +NA++ AC +F+++++ GL P T+ +
Sbjct: 239 ------------IERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLVS 286
Query: 358 VMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 417
+GK+ F M G + + + A E++ ++ M ++G
Sbjct: 287 ATTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGCEP 346
Query: 418 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 477
Y L C W++A+ V I+ + P IT++ L+ + + G + +++
Sbjct: 347 RLENYNALLCAYEKTANWEEAVRTVVWIQE-KGFTPDFITWSSLLGACANAGQAEKAVAV 405
Query: 478 FQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 536
+ MK ++ PN+ + +LK Y + + K +E+F + G P P+
Sbjct: 406 MEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHS-----------MLNSGCP--PN 452
Query: 537 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 596
E ++S+L A QW+ Y + G +LD + + ++AG+ L E
Sbjct: 453 EVAWNSLLSAYEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIR 512
Query: 597 SLLEAGEIPHPLFFTEML 614
+ ++G P+ + ++ ++
Sbjct: 513 QMKQSGCQPNIVTYSSLI 530
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 151/373 (40%), Gaps = 39/373 (10%)
Query: 172 AKNWK----FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A WK F+ +M G F G+ ++ + R+++ +L + + L++
Sbjct: 291 AGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGCEPRLEN 350
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
Y LL K EA+R + +++ PD + S+ G ++ V ++
Sbjct: 351 ---YNALLCAYEKTANWEEAVRTV-VWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVM 406
Query: 288 ERMRQKP--------SKRIKNMHRK-NWDPVLE-----------PDLVVYNAVLNACVPS 327
E+M++ +K + NW+ E P+ V +N++L+A
Sbjct: 407 EKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSAYEKG 466
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTY 387
QWK V + ++ + G+K + + + ++G++ L + R+M +SG +TY
Sbjct: 467 RQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTY 526
Query: 388 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC----NNGRWQD-AMLVV 442
L++A+ + G N+A + ++M G+ + ACC GR D M
Sbjct: 527 SSLIKAYGDVGLWNKAESVFKSMLLEGIRPDSK-----ACCALLRAYAKGRQLDKVMFFF 581
Query: 443 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSR 501
+ + KP + + + + G ++M+ C P+ ++ +Y
Sbjct: 582 DSMMPRYGIKPDKYAYAAIFWACWTCGEWQRAADYMENMEAAGCTPDTMIYTTLITMYEA 641
Query: 502 NDMFSKAKELFEE 514
+ KA E+ ++
Sbjct: 642 HGQVDKAMEILKK 654
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 121/318 (38%), Gaps = 21/318 (6%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVH 369
L D+ N V+ W VF+ R + ++P+A + V+ +
Sbjct: 169 LRVDVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEAL 228
Query: 370 EFFRKMAKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 429
+ FR M K G T+ L+ A G + AV M++ G+ + L
Sbjct: 229 KLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLVSAT 288
Query: 430 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 488
G+W+ A + +++ S + FT + + + + + + Q M + CEP
Sbjct: 289 TAAGKWKAAQSFINLMQAGGFSFAIG-EFTEMQWACARARNSRESLGLLQAMIEQGCEPR 347
Query: 489 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 548
+ NA+L Y + + +E G+T PD T+SS+L A A
Sbjct: 348 LENYNALLCAYEKT---ANWEEAVRTVVWIQEKGFT----------PDFITWSSLLGACA 394
Query: 549 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 608
A Q E V + M + + +LL + G E F S+L +G P+ +
Sbjct: 395 NAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEV 454
Query: 609 FFTEMLIQAIVQSNYEKA 626
+ +L S YEK
Sbjct: 455 AWNSLL------SAYEKG 466
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 16/191 (8%)
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ + D+ A+ + L + G + K I +M+Q +P++V
Sbjct: 480 EELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGC---------------QPNIV 524
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKM 375
Y++++ A W VFK + G++P + + + + D V FF M
Sbjct: 525 TYSSLIKAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSM 584
Query: 376 -AKSGEAIGALTYKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 434
+ G Y + A W G+ A + NME G +Y L +G+
Sbjct: 585 MPRYGIKPDKYAYAAIFWACWTCGEWQRAADYMENMEAAGCTPDTMIYTTLITMYEAHGQ 644
Query: 435 WQDAMLVVEKI 445
AM +++K+
Sbjct: 645 VDKAMEILKKM 655
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/476 (18%), Positives = 181/476 (38%), Gaps = 86/476 (18%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D + K ++F M G+ + + +L+G SW+ A ++ +
Sbjct: 303 VLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL-- 360
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ L + F + LL+ L K G+ +EA +++ ++ + P++ +Y+++
Sbjct: 361 --ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAK-GISPNVVSYNNI--------- 408
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
++ R+ ++++ D P+ V + +++ + F +F +
Sbjct: 409 ------ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHR 462
Query: 340 LRKSGLKPSAATYGLAMEVMLQSGKYDLVHEFFRKMAKSGEAIGALTYKVLVRAFWEEGK 399
++ + + P+ T G+ ++ + ++G+ + F K G + Y ++ F +EG
Sbjct: 463 MKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 522
Query: 400 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 459
IN A R M + G+ P +T+T
Sbjct: 523 INLASNVYREMCEVGIT------------------------------------PSTVTYT 546
Query: 460 GLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 518
LI G +ID + + MK + +I ++ + + A EL E
Sbjct: 547 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELR-- 604
Query: 519 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 578
GA L P+ + Y+SM+ + E +YK M G D + L
Sbjct: 605 -----------GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSL 653
Query: 579 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 634
+ ++G+ LL A +I TEML + I+ + V LIN +
Sbjct: 654 IDGLLKSGR----------LLYASDI-----HTEMLSKGILPDDRAHTV-LINGLC 693
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 75/410 (18%), Positives = 144/410 (35%), Gaps = 73/410 (17%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKG---------VFWVFKQLRKSGLKPSAATYGLAMEVML 360
L+ D+V +N V + KG + ++ +SGL P+ TY + ++
Sbjct: 250 LKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCC 309
Query: 361 QSGKYDLVHEFFRKMAKSG-----------------------------EAI-----GALT 386
++G + EF+ +M G +A+ T
Sbjct: 310 KNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFT 369
Query: 387 YKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 446
+ L+ +EGK+NEA + +G+ Y + C A V +++
Sbjct: 370 FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 429
Query: 447 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 505
P +TFT L+ G I++ SIF MKD + P T+ ++K +
Sbjct: 430 D-NGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488
Query: 506 SKAKELFEETTRANSSGY--------TFLSG---DG--------------APLKPDEYTY 540
+ ++LF + S G+ T + G +G + P TY
Sbjct: 489 FEGRDLFNKFV---SQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY 545
Query: 541 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 600
+S+++ + + + M G ++D + L+ + + L
Sbjct: 546 TSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRG 605
Query: 601 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 650
AG P+ + M+ +N E+A+ L M + +T L +
Sbjct: 606 AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLID 655
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,154,487,654
Number of Sequences: 23463169
Number of extensions: 534634299
Number of successful extensions: 1620276
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4158
Number of HSP's successfully gapped in prelim test: 3399
Number of HSP's that attempted gapping in prelim test: 1542554
Number of HSP's gapped (non-prelim): 39142
length of query: 880
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 728
effective length of database: 8,792,793,679
effective search space: 6401153798312
effective search space used: 6401153798312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)