Query 002799
Match_columns 879
No_of_seqs 222 out of 448
Neff 4.3
Searched_HMMs 29240
Date Tue Mar 26 18:25:42 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002799.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1511-1515//hhsearch_pdb/002799hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t7a_A Inositol pyrophosphate 1.0 1 1 930.8 26.1 324 3-333 4-327 (330)
2 1i7n_A Synapsin II; synapse, p 1.0 1 1 242.8 15.1 221 53-313 65-302 (309)
3 2p0a_A Synapsin-3, synapsin II 1.0 1 1 242.0 14.8 221 56-316 85-322 (344)
4 1pk8_A RAT synapsin I; ATP bin 1.0 1 1 239.5 14.9 221 55-315 179-416 (422)
5 2q7d_A Inositol-tetrakisphosph 1.0 1 1 221.8 18.5 280 3-316 15-337 (346)
6 3ln6_A Glutathione biosynthesi 1.0 1 1 182.4 8.3 184 83-293 471-725 (750)
7 3ln7_A Glutathione biosynthesi 1.0 1 1 181.2 7.3 181 86-293 479-731 (757)
8 1z2n_X Inositol 1,3,4-trisphos 1.0 1 1 173.2 16.3 258 1-299 6-308 (324)
9 1uc8_A LYSX, lysine biosynthes 1.0 1 1 166.0 18.1 238 21-290 11-254 (280)
10 1gsa_A Glutathione synthetase; 1.0 1 1 152.7 7.3 226 23-289 21-285 (316)
No 1
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=1.00 E-value=1 Score=930.78 Aligned_cols=324 Identities=57% Similarity=1.044 Sum_probs=313.3
Q ss_pred CCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCC
Q ss_conf 77726999963486548954899999873069717999177300158875677744232344689837999999876199
Q 002799 3 VHKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKP 82 (879)
Q Consensus 3 ~~~~~~iGvCaM~~Ka~SkPm~~IL~rL~~~~~f~iiiF~d~~IL~~~ve~wP~~D~lIsf~s~GfpL~kai~y~~lr~p 82 (879)
.+++|+||||||++||+|||||+||+||.++++|++|||+|++|||+|||+||+|||||||||+||||+|||+|+++|+|
T Consensus 4 ~~~~~~~gvcam~~k~~s~pm~~il~rl~~~~~f~~iif~d~~il~~~ve~wp~~d~lisf~s~gfpl~kai~y~~lr~p 83 (330)
T 3t7a_A 4 TERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNP 83 (330)
T ss_dssp --CCEEEEEESCHHHHTSHHHHHHHHHHTTSTTEEEEECCHHHHHHSCGGGSCCCSEEEECCCTTCCHHHHHHHHHHHCC
T ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 99864999976466001678999999743469679999479734369733187677887762579857999999987499
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEE
Q ss_conf 53589014667633999999999689999978998246787555433455450455170405758995043267621687
Q 002799 83 FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIY 162 (879)
Q Consensus 83 ~~iNdl~~q~~l~DR~~~~qiL~~~gIp~P~t~~~~r~~p~~~~~~~~e~~d~I~v~g~~~~kPfVeKpv~GedHni~IY 162 (879)
|+|||+.+|.++|||+++|++|+++|||+|+|++++++...+....|+|.+|+++++|++++||||+||++|||||||||
T Consensus 84 ~~INd~~~q~~~~DK~~~~~iL~~~gIPtP~t~~~~rd~~~~~~~~~~e~~d~i~~~g~~l~kPfVeKPv~Gsdhni~iy 163 (330)
T 3t7a_A 84 FVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIY 163 (330)
T ss_dssp EESBCSTHHHHHTBHHHHHHHHHHTTCCCCCEEEECCBTTBGGGSSEEECSSEEEETTEEEESSEEEEESBTTCCCCEEE
T ss_pred CEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEECCCHHHHHCCCCCCCCEEECCCCCCCCCCEEE
T ss_conf 66677999998877999999999769999998999578787665311033024542430146873683654456751145
Q ss_pred ECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCCEEEECCCCC
Q ss_conf 02578872889973307876544555222346851699531588981038999878325888610799999023168999
Q 002799 163 YPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGK 242 (879)
Q Consensus 163 yp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyEEFi~t~G~DIKVytVG~~~vhAe~RKSP~~DG~vrrN~~gk 242 (879)
||+||||||+|||||++|+||+|+|++ .+|++++|||||||+++|+||||||||++|+|||+|+||++||+||||+|||
T Consensus 164 yp~s~GgG~~RLfrki~n~sS~~~~~~-~vr~~~~~i~QEFI~~~G~DIRv~vVG~~vv~Am~R~sp~~~G~~r~N~~gG 242 (330)
T 3t7a_A 164 YPTSAGGGSQRLFRKIGSRSSVYSPES-NVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGK 242 (330)
T ss_dssp CCGGGTCCEEEEEEEETTEEEEEESCC-SCCSSSCEEEEECCCCSSEEEEEEEESTTCEEEEEEECTTSSCBCCBCTTSC
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHH-HHCCCCCEEEEECCCCCCCEEEEEEECCEEEEEEEEECCCCCCCEEECCCCC
T ss_conf 024468755545455077221137556-4224785899815589992689999999989999985888888278747888
Q ss_pred CEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 40013628998999999999992790638979865899279921795222353131999999999999974089999999
Q 002799 243 EVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAI 322 (879)
Q Consensus 243 e~r~pv~Lt~eEk~iA~kv~~afgq~VcGfDLLRs~g~syVcDVNG~SFvK~n~kYYddcA~iL~~~~l~~~~p~~~~~~ 322 (879)
|+|++++||++|+++|+|||+||||+||||||||++++|||||||||||||+|.+|||+||.|||.+|++++||++
T Consensus 243 ~~~~~v~Lt~eek~iA~kaa~a~G~~v~GVDlLrs~~~~~V~EVNg~~fvk~~~~yyd~~a~il~~~~~~~~~~~~---- 318 (330)
T 3t7a_A 243 EVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQF---- 318 (330)
T ss_dssp BCCEECCCCHHHHHHHHHHHHHTTBSEEEEEEEEETTEEEEEEEEESCCCSSCHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC----
T ss_conf 5022446999999999999999699647899999899628998379950268436899999999999999757135----
Q ss_pred CCCCCCCCCCC
Q ss_conf 99999887899
Q 002799 323 PPILPWKVNEP 333 (879)
Q Consensus 323 ~~~~p~~~~~~ 333 (879)
++||+++.+
T Consensus 319 --~~~~~~~~~ 327 (330)
T 3t7a_A 319 --HIPWSIPLE 327 (330)
T ss_dssp --TCCCCC---
T ss_pred --CCCCCCCCC
T ss_conf --776037777
No 2
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=1.00 E-value=1 Score=242.82 Aligned_cols=221 Identities=14% Similarity=0.120 Sum_probs=168.5
Q ss_pred CCCCCCEEECCCCCCC-----CHHHHHHHHHHCCCCCCCCCHHHHHHHHH----HHHHHHHHHCCC---CCCCEEEEECC
Q ss_conf 6777442323446898-----37999999876199535890146676339----999999996899---99978998246
Q 002799 53 KWPICDCLIAFYSSGY-----PLEKAESYATLRKPFLVNELEPQHLLHDR----RKVYEQLEKYGI---PVPRYALVNRE 120 (879)
Q Consensus 53 ~wP~~D~lIsf~s~Gf-----pL~kai~y~~lr~p~~iNdl~~q~~l~DR----~~~~qiL~~~gI---p~P~t~~~~r~ 120 (879)
..+..|++|.+-.... ....++++++.+|.+++|++.++..++|| ..++++|.+.|+ |+|.+.+...
T Consensus 65 r~~~~D~vi~R~~~~~~~~~~~~r~vl~~le~~GvpviN~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~~~~~- 143 (309)
T 1i7n_A 65 RSFRPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSINSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPN- 143 (309)
T ss_dssp EEECCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEESCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESS-
T ss_pred EECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECC-
T ss_conf 0116889999503432234413999999998789603388899997479417899999999967997799897775077-
Q ss_pred CCCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCC-CCCCEE
Q ss_conf 7875554334554504551704057589950432676216870257887288997330787654455522234-685169
Q 002799 121 VPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-REGSYI 199 (879)
Q Consensus 121 ~p~~~~~~~~e~~d~I~v~g~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-~~gsyI 199 (879)
..+.++ .+++|+|+||++|+ +|-|+. |.+......+..+ .++ ....++
T Consensus 144 -----------~~~~~~----~~g~PvVvK~~~Gs-----------~G~GV~-lv~~~~~~~~~~~----~~~~~~~~~~ 192 (309)
T 1i7n_A 144 -----------HREMLT----LPTFPVVVKIGHAH-----------SGMGKV-KVENHYDFQDIAS----VVALTQTYAT 192 (309)
T ss_dssp -----------GGGGSS----CCCSSEEEEESSCS-----------TTTTEE-EECSHHHHHHHHH----HHHHHTCCEE
T ss_pred -----------HHHHHH----CCCCCEEEEECCCC-----------CEECEE-EECCHHHHHHHHH----HHHCCCCEEE
T ss_conf -----------656643----25998899968997-----------513859-9789999999999----9842597499
Q ss_pred EEECCCCCCCEEEEEEECCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHH-CCCEEEEEEEEEC
Q ss_conf 953158898103899987832588861079999902316899940013628998999999999992-7906389798658
Q 002799 200 YEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAF-RQAVCGFDLLRCE 278 (879)
Q Consensus 200 yEEFi~t~G~DIKVytVG~~~vhAe~RKSP~~DG~vrrN~~gke~r~pv~Lt~eEk~iA~kv~~af-gq~VcGfDLLRs~ 278 (879)
.||||+ .|+||||++||++++ |+.|+|+ .|.|++|.+ ++...++.++++++++|.+|+++| |+++||||||++.
T Consensus 193 vQefI~-~g~DiRv~VvGg~v~-a~~Rr~~--~g~wrtN~~-~~~~e~~~l~~e~~~la~~A~~a~gGldi~GVDll~~~ 267 (309)
T 1i7n_A 193 AEPFID-AKYDIRVQKIGNNYK-AYMRTSI--SGNWKTNTG-SAMLEQIAMSDRYKLWVDACSEMFGGLDICAVKAVHGK 267 (309)
T ss_dssp EEECCC-EEEEEEEEEETTEEE-EEEEESS--CTTTSCSCC-CSSEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEET
T ss_pred EEEECC-CCCEEEEEEECCEEE-EEEEECC--CCCCEECCC-CCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEECC
T ss_conf 995318-992289999999999-9999837--998742577-61456508998999999999998289978999989838
Q ss_pred CC-CEEEECCC--CCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99-27992179--5222353131999999999999974
Q 002799 279 GR-SYVCDVNG--WSFVKNSYKYYDDAACVLRKMFLEA 313 (879)
Q Consensus 279 g~-syVcDVNG--~SFvK~n~kYYddcA~iL~~~~l~~ 313 (879)
+| +||+|||+ .++.++... +.+.-+..+++..
T Consensus 268 ~g~~~V~EVN~~~~P~~~~~~~---~~~~~ia~~ii~~ 302 (309)
T 1i7n_A 268 DGKDYIFEVMDCSMPLIGEHQV---EDRQLITDLVISK 302 (309)
T ss_dssp TSCEEEEEEECTTCCCCSSCHH---HHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCCCHHH---HHHHHHHHHHHHH
T ss_conf 9988999987898898542224---4689999999999
No 3
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=242.02 Aligned_cols=221 Identities=14% Similarity=0.144 Sum_probs=168.4
Q ss_pred CCCEEECCCCCCC-----CHHHHHHHHHHCCCCCCCCCHHHHHHHHH----HHHHHHHHHCCC---CCCCEEEEECCCCC
Q ss_conf 7442323446898-----37999999876199535890146676339----999999996899---99978998246787
Q 002799 56 ICDCLIAFYSSGY-----PLEKAESYATLRKPFLVNELEPQHLLHDR----RKVYEQLEKYGI---PVPRYALVNREVPY 123 (879)
Q Consensus 56 ~~D~lIsf~s~Gf-----pL~kai~y~~lr~p~~iNdl~~q~~l~DR----~~~~qiL~~~gI---p~P~t~~~~r~~p~ 123 (879)
..|++|.+-.... ....++++++..|.+++|++.++..++|| ...+++|.+.|+ |+|.+.+...
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~GvpviN~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t~~~~---- 160 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPN---- 160 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEESCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCEEESS----
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCC----
T ss_conf 8878999524432132014999999998789603388899986379307899999999977997799897774276----
Q ss_pred CCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCC-CCCCEEEEE
Q ss_conf 5554334554504551704057589950432676216870257887288997330787654455522234-685169953
Q 002799 124 QELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-REGSYIYEE 202 (879)
Q Consensus 124 ~~~~~~~e~~d~I~v~g~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-~~gsyIyEE 202 (879)
..+.++ .+++|+|+||++|+ +|-|+. |.+......+..+ .+. ....++.||
T Consensus 161 --------~~~~~~----~~g~PvVvK~~~Gs-----------~G~GV~-lve~~~~~~~~~~----~~~~~~~~~~vQe 212 (344)
T 2p0a_A 161 --------HKPMVT----APHFPVVVKLGHAH-----------AGMGKI-KVENQLDFQDITS----VVAMAKTYATTEA 212 (344)
T ss_dssp --------STTCCC----CSSSSEEEEESSCC-----------TTTTEE-EECSHHHHHHHHH----HHHHHTCCEEEEE
T ss_pred --------HHHHHH----CCCCCEEEEECCCC-----------CEECEE-EECCHHHHHHHHH----HHHCCCCEEEEEE
T ss_conf --------555533----24998899958897-----------314749-9789999999999----9851497599982
Q ss_pred CCCCCCCEEEEEEECCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHH-CCCEEEEEEEEECCC-
Q ss_conf 158898103899987832588861079999902316899940013628998999999999992-790638979865899-
Q 002799 203 FMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAF-RQAVCGFDLLRCEGR- 280 (879)
Q Consensus 203 Fi~t~G~DIKVytVG~~~vhAe~RKSP~~DG~vrrN~~gke~r~pv~Lt~eEk~iA~kv~~af-gq~VcGfDLLRs~g~- 280 (879)
||+ .|+||||++||++++ |+.|+++ .|.|++|.+ ++...++.++++++++|.+++++| |+++||||||++.+|
T Consensus 213 fI~-~g~DiRv~VVGg~vv-a~~R~~~--~g~wrtN~~-~~~~e~~~l~~e~~~la~~Aa~a~gGldi~GVDll~~~~G~ 287 (344)
T 2p0a_A 213 FID-SKYDIRIQKIGSNYK-AYMRTSI--SGNWKANTG-SAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR 287 (344)
T ss_dssp CCC-EEEEEEEEEETTEEE-EEEEEES--SSCSSTTSS-SEEEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETTSC
T ss_pred CCC-CCCCEEEEEECCEEE-EEEEECC--CCCCEECCC-CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
T ss_conf 048-995279999999999-9999648--998752677-53777617998999999999998279978999889738998
Q ss_pred CEEEECCC--CCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 27992179--5222353131999999999999974089
Q 002799 281 SYVCDVNG--WSFVKNSYKYYDDAACVLRKMFLEAKAP 316 (879)
Q Consensus 281 syVcDVNG--~SFvK~n~kYYddcA~iL~~~~l~~~~p 316 (879)
.||||||+ -++.++.. .+++.-+...+++.+..
T Consensus 288 ~~VlEVN~~~~P~~~~~~---~~~~~~Ia~~ii~~i~~ 322 (344)
T 2p0a_A 288 DYIIEVMDSSMPLIGEHV---EEDRQLMADLVVSKMSQ 322 (344)
T ss_dssp EEEEEEECTTCCCCGGGH---HHHHHHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCCCCCHH---HHHHHHHHHHHHHHHHH
T ss_conf 799998689887644244---55799999999999997
No 4
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=1.00 E-value=1 Score=239.52 Aligned_cols=221 Identities=15% Similarity=0.143 Sum_probs=167.8
Q ss_pred CCCCEEECCCCCCC-----CHHHHHHHHHHCCCCCCCCCHHHHHHHHH----HHHHHHHHHCCC---CCCCEEEEECCCC
Q ss_conf 77442323446898-----37999999876199535890146676339----999999996899---9997899824678
Q 002799 55 PICDCLIAFYSSGY-----PLEKAESYATLRKPFLVNELEPQHLLHDR----RKVYEQLEKYGI---PVPRYALVNREVP 122 (879)
Q Consensus 55 P~~D~lIsf~s~Gf-----pL~kai~y~~lr~p~~iNdl~~q~~l~DR----~~~~qiL~~~gI---p~P~t~~~~r~~p 122 (879)
...|++|.+-.... ....++++++..|.+++|++.++..++|| ..++++|.+.|+ |+|.+.+...
T Consensus 179 ~~~DaviiR~~~~~~~~~~~yr~vlr~lE~~GvpviNs~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t~~~~--- 255 (422)
T 1pk8_A 179 LKPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTFYPN--- 255 (422)
T ss_dssp ECCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEESCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESS---
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCC---
T ss_conf 57878999513321132024999999998789612388899997479327899999999857997799886673276---
Q ss_pred CCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCC-CCCCEEEE
Q ss_conf 75554334554504551704057589950432676216870257887288997330787654455522234-68516995
Q 002799 123 YQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-REGSYIYE 201 (879)
Q Consensus 123 ~~~~~~~~e~~d~I~v~g~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-~~gsyIyE 201 (879)
..+.+. .+++|+|+||++|+ +|-|+. |.+......+..+ .++ ....+++|
T Consensus 256 ---------~~~~i~----~~g~PvVvKp~~GS-----------~G~GV~-lve~~~~l~~ii~----~~~~~~~~~~vQ 306 (422)
T 1pk8_A 256 ---------HKEMLS----STTYPVVVKMGHAH-----------SGMGKV-KVDNQHDFQDIAS----VVALTKTYATAE 306 (422)
T ss_dssp ---------GGGCCC----CSSSSEEEEESSCC-----------TTTTEE-EECSHHHHHHHHH----HHHHHTSCEEEE
T ss_pred ---------HHHHHH----CCCCCEEEEECCCC-----------CEECEE-EECCHHHHHHHHH----HHHCCCCEEEEE
T ss_conf ---------566554----15998899818897-----------314849-9679999999999----984249659998
Q ss_pred ECCCCCCCEEEEEEECCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHH-CCCEEEEEEEEECCC
Q ss_conf 3158898103899987832588861079999902316899940013628998999999999992-790638979865899
Q 002799 202 EFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAF-RQAVCGFDLLRCEGR 280 (879)
Q Consensus 202 EFi~t~G~DIKVytVG~~~vhAe~RKSP~~DG~vrrN~~gke~r~pv~Lt~eEk~iA~kv~~af-gq~VcGfDLLRs~g~ 280 (879)
|||+ .|+||||++||++++ |+.|+++ .|.||+|++ ++...++.++++++++|.+++++| |++|||||||++.+|
T Consensus 307 EfI~-~g~DIRv~VVGg~vv-a~~Rr~~--~g~WrtNvg-~g~~e~i~lt~e~~elA~kAaka~gGldiaGVDlL~s~dG 381 (422)
T 1pk8_A 307 PFID-AKYDVRVQKIGQNYK-AYMRTSV--SGNWKTNTG-SAMLEQIAMSDRYKLWVDTCSEIFGGLDICAVEALHGKDG 381 (422)
T ss_dssp ECCC-EEEEEEEEEETTEEE-EEEEEES--SSCSSTTSS-CEEEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETTS
T ss_pred EECC-CCCEEEEEEECCEEE-EEEEECC--CCCCEECCC-CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
T ss_conf 5128-994289999999999-9999827--997454367-6156651799899999999999817997899988973899
Q ss_pred -CEEEECCC--CCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf -27992179--522235313199999999999997408
Q 002799 281 -SYVCDVNG--WSFVKNSYKYYDDAACVLRKMFLEAKA 315 (879)
Q Consensus 281 -syVcDVNG--~SFvK~n~kYYddcA~iL~~~~l~~~~ 315 (879)
.||||||+ -++.++... +.+.-+..+++..+.
T Consensus 382 ~~~VlEVN~s~~P~~~g~~~---~~~~~IA~~ii~~i~ 416 (422)
T 1pk8_A 382 RDHIIEVVGSSMPLIGDHQD---EDKQLIVELVVNKMT 416 (422)
T ss_dssp CEEEEEEECTTCCCCTTCHH---HHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCHHH---HHHHHHHHHHHHHHH
T ss_conf 87999987898887531456---679999999999999
No 5
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=1.00 E-value=1 Score=221.82 Aligned_cols=280 Identities=18% Similarity=0.241 Sum_probs=193.9
Q ss_pred CCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCC------------H
Q ss_conf 7772699996348654895489999987306971799917730015887567774423234468983------------7
Q 002799 3 VHKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYP------------L 70 (879)
Q Consensus 3 ~~~~~~iGvCaM~~Ka~SkPm~~IL~rL~~~~~f~iiiF~d~~IL~~~ve~wP~~D~lIsf~s~Gfp------------L 70 (879)
..+..+||.|--.||.++--.+.+...+.+.| ++++.+.-.. +......+|++|......++ +
T Consensus 15 ~~~~~~vG~~l~~kk~~~~~~~~l~~al~~~G-~~~~~iD~~~----~~~~~~~~Dvvi~~l~~~~~ea~~~d~~~~~~~ 89 (346)
T 2q7d_A 15 FLKGKRVGYWLSEKKIKKLNFQAFAELCRKRG-MEVVQLNLSR----PIEEQGPLDVIIHKLTDVILEADQNDSQSLELV 89 (346)
T ss_dssp GGTTCEEEEECCHHHHHHHTHHHHHHHHHTTT-CEEEECCTTS----CSGGGCCCSEEEECCHHHHHHHHTTCHHHHHHH
T ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCC-CEEEECCCCC----CHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHH
T ss_conf 46755999998766620554999999998679-4899914564----154458978899677553322346743677999
Q ss_pred HHHHHHHH-HCCCCCCCCCHHHHHHHHHHHHHHHHHHC-------CCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEE
Q ss_conf 99999987-61995358901466763399999999968-------99999789982467875554334554504551704
Q 002799 71 EKAESYAT-LRKPFLVNELEPQHLLHDRRKVYEQLEKY-------GIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNR 142 (879)
Q Consensus 71 ~kai~y~~-lr~p~~iNdl~~q~~l~DR~~~~qiL~~~-------gIp~P~t~~~~r~~p~~~~~~~~e~~d~I~v~g~~ 142 (879)
....+|.. ..+.+++|+..++..++||..++++|++. |||+|+|+++....+. +..+.+...+
T Consensus 90 ~~l~~~~~~~~gv~vinp~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t~~~~~~~~~-------~~~~~~~~~~-- 160 (346)
T 2q7d_A 90 HRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPFMELTSLCGD-------DTMRLLEKNG-- 160 (346)
T ss_dssp HHHHHHHHHCTTSEEESCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCEEEECSCCCT-------THHHHHHHTT--
T ss_pred HHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHH-------HHHHHHHHCC--
T ss_conf 9999999877990881889999986249999999984013245788799988998079878-------9999999628--
Q ss_pred CCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEE
Q ss_conf 05758995043267621687025788728899733078765445552223468516995315889810389998783258
Q 002799 143 FWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAH 222 (879)
Q Consensus 143 ~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyEEFi~t~G~DIKVytVG~~~vh 222 (879)
+++|+|+||+.|+ -+.+-|+ ..+.+... +. . .+..+++||||+.+|.|+|||+||+++++
T Consensus 161 lg~P~VvKP~~g~---------Gs~s~~v----~~v~~~~~-l~----~--~~~~~lvQefI~~~G~dirv~VvG~~v~~ 220 (346)
T 2q7d_A 161 LTFPFICKTRVAH---------GTNSHEM----AIVFNQEG-LN----A--IQPPCVVQNFINHNAVLYKVFVVGESYTV 220 (346)
T ss_dssp CCSSEEEECSBCS---------STTCCEE----EEECSGGG-TT----C----CCEEEEECCCCTTEEEEEEEETTEEEE
T ss_pred CCCCEEEEECCCC---------CCEEEEE----EEECCHHH-HH----H--CCCCEEEEEEECCCCEEEEEEEECCEEEE
T ss_conf 8899899856778---------6406546----88538899-97----5--47977999855799827899999999999
Q ss_pred EEEEECCCC-CC-------EEEE-CCC-CCCEEE---------EE--ECCHHHHHHHHHHHHHHCCCEEEEEEEEEC--C
Q ss_conf 886107999-99-------0231-689-994001---------36--289989999999999927906389798658--9
Q 002799 223 AEARKSPVV-DG-------VVMR-NPD-GKEVRY---------PV--LLTPNEKQMAREVCIAFRQAVCGFDLLRCE--G 279 (879)
Q Consensus 223 Ae~RKSP~~-DG-------~vrr-N~~-gke~r~---------pv--~Lt~eEk~iA~kv~~afgq~VcGfDLLRs~--g 279 (879)
++.|..|.. .| .|.+ |.+ +|+.++ +. ..+++.+++|.++++++|++++|||++++. |
T Consensus 221 ~~r~sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~el~~lA~~a~~alGl~~~gvDii~~~~~g 300 (346)
T 2q7d_A 221 VQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIINNQTG 300 (346)
T ss_dssp EEEECCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECTTTC
T ss_pred EEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCC
T ss_conf 99724777675755566311310000357754323334444543547983999999999999829966716888645899
Q ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9279921795222353131999999999999974089
Q 002799 280 RSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAP 316 (879)
Q Consensus 280 ~syVcDVNG~SFvK~n~kYYddcA~iL~~~~l~~~~p 316 (879)
++||+|||.|+-+++-.+|...++.+|.....+.-.|
T Consensus 301 ~~~VlEVN~~PG~~g~~~~~~~i~~~l~~~~~~~~~~ 337 (346)
T 2q7d_A 301 QHAVIDINAFPGYEGVSEFFTDLLNHIATVLQGQSTA 337 (346)
T ss_dssp CEEEEEEEESCCCTTCTTHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 7799998478542341229999999999986236998
No 6
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=1.00 E-value=1 Score=182.39 Aligned_cols=184 Identities=19% Similarity=0.241 Sum_probs=140.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEE
Q ss_conf 53589014667633999999999689999978998246787555433455450455170405758995043267621687
Q 002799 83 FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIY 162 (879)
Q Consensus 83 ~~iNdl~~q~~l~DR~~~~qiL~~~gIp~P~t~~~~r~~p~~~~~~~~e~~d~I~v~g~~~~kPfVeKpv~GedHni~IY 162 (879)
...+...+...++||..+.++|+++|||+|++.++... ++........+++|+|+||..|.
T Consensus 471 tg~~~~~a~~~~~DK~~tk~lL~~~GIPvP~~~~~~~~------------~ea~~~~~~~~g~PvVVKP~~G~------- 531 (750)
T 3ln6_A 471 TSKDNYIVPLAMANKVVTKKILDEKHFPTPFGDEFTDR------------KEALNYFSQIQDKPIVVKPKSTN------- 531 (750)
T ss_dssp CTTSCTHHHHHTTTSHHHHHHHHHTTCCCCCCCCEETT------------TTHHHHHHHSSSSCEEEEETTCC-------
T ss_pred ECCCHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCH------------HHHHHHHHHHCCCCEEEEECCCC-------
T ss_conf 58799999999709999999999779699998998999------------99999999864995899848999-------
Q ss_pred ECCCCCCHHHHHHHHCCCCCCCCCCCCC-CCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCC--C-------
Q ss_conf 0257887288997330787654455522-23468516995315889810389998783258886107999--9-------
Q 002799 163 YPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVV--D------- 232 (879)
Q Consensus 163 yp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyEEFi~t~G~DIKVytVG~~~vhAe~RKSP~~--D------- 232 (879)
+|.|+. ++..+.+....... .. ..+.+..+|+||||+ |+|++|++||+++++|+.|.++.+ |
T Consensus 532 ----~G~GV~-iv~~~~s~eel~~a-~~~~~~~~~~vlVEefI~--G~E~~v~Vvgg~vvaa~~r~p~~v~GdG~~tI~e 603 (750)
T 3ln6_A 532 ----FGLGIS-IFKTSANLASYEKA-IDIAFTEDSAILVEEYIE--GTEYRFFVLEGDCIAVLLRVAANVVGDGIHTISQ 603 (750)
T ss_dssp ----SSSSCE-EESSCCCHHHHHHH-HHHHHHHCSEEEEEECCC--SEEEEEEEETTEEEEEEEEECCEEECCTTCCHHH
T ss_pred ----CCCCEE-EEECCCCHHHHHHH-HHHHHHHCCCEEEEECCC--CCEEEEEEECCEEEEEEEEECCEEECCCCCCHHH
T ss_conf ----977779-97078999999999-999875277399995467--9789999999999899998666576588657999
Q ss_pred ---------------------------------------------CE-----EEECCCCCCEEEEE--ECCHHHHHHHHH
Q ss_conf ---------------------------------------------90-----23168999400136--289989999999
Q 002799 233 ---------------------------------------------GV-----VMRNPDGKEVRYPV--LLTPNEKQMARE 260 (879)
Q Consensus 233 ---------------------------------------------G~-----vrrN~~gke~r~pv--~Lt~eEk~iA~k 260 (879)
|. +++|.+.||....+ .++++.+++|.+
T Consensus 604 LI~~~n~dp~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~L~~~~Nls~Gg~~~d~td~i~p~~~~~a~~ 683 (750)
T 3ln6_A 604 LVKLKNQNPLRGYDHRSPLEVIELGEVEQLMLEQQGYTVNSIPPEGTKIELRRNSNISTGGDSIDVTNTMDPTYKQLAAE 683 (750)
T ss_dssp HHHHHTTCTTEESSSCCSEECCCCCHHHHHHHHHTTCCSSCCCCTTCEEESCSSCCTTTTCEEEECTTTSCHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHH
T ss_conf 99862468433545557632245337899999972898133389998899752230168973064534479999999999
Q ss_pred HHHHHCCCEEEEEEEEEC---------CCCEEEECCCCCCCC
Q ss_conf 999927906389798658---------992799217952223
Q 002799 261 VCIAFRQAVCGFDLLRCE---------GRSYVCDVNGWSFVK 293 (879)
Q Consensus 261 v~~afgq~VcGfDLLRs~---------g~syVcDVNG~SFvK 293 (879)
|++++|+.+|||||+..+ ++.+|+|||+-+-.+
T Consensus 684 aa~~igl~~~GvDli~~di~~~~~~~~~~~~iiEvN~~pg~~ 725 (750)
T 3ln6_A 684 MAEAMGAWVCGVDLIIPNATQAYSKDKKNATCIELNFNPLMY 725 (750)
T ss_dssp HHHHHTCSSCEEEEEESCSSSCCCTTTTCCEEEEEESSCCCH
T ss_pred HHHHHCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHH
T ss_conf 999849986999998447644343457982899975884254
No 7
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=1.00 E-value=1 Score=181.24 Aligned_cols=181 Identities=20% Similarity=0.234 Sum_probs=135.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECC
Q ss_conf 89014667633999999999689999978998246787555433455450455170405758995043267621687025
Q 002799 86 NELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPS 165 (879)
Q Consensus 86 Ndl~~q~~l~DR~~~~qiL~~~gIp~P~t~~~~r~~p~~~~~~~~e~~d~I~v~g~~~~kPfVeKpv~GedHni~IYyp~ 165 (879)
++..+..+.+||..+.++|+++|||+|++.++... ++........+++|+|+||..|.
T Consensus 479 ~s~~aa~~~~DK~~tk~lL~~~GIPvP~~~~~~~~------------~ea~~~~~~~~g~PvVVKP~~g~---------- 536 (757)
T 3ln7_A 479 DSYISPLIMENKVVTKKVLQKAGFNVPQSVEFTSL------------EKAVASYALFENRAVVIKPKSTN---------- 536 (757)
T ss_dssp SBSHHHHHHHHSHHHHHHHHHHTCCCCCEEEESCH------------HHHHHGGGGSSSSCEEEEESSCS----------
T ss_pred CHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCH------------HHHHHHHHHHCCCCEEEEECCCC----------
T ss_conf 88999999609999999999779699997997999------------99999999861998899838999----------
Q ss_pred CCCCHHHHHHH-HCCCCCCCCCCCCC-CCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCC------------
Q ss_conf 78872889973-30787654455522-23468516995315889810389998783258886107999------------
Q 002799 166 SAGGGMKELFR-KVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVV------------ 231 (879)
Q Consensus 166 ~~GgG~~rLfr-kign~sS~~~p~~~-~~r~~gsyIyEEFi~t~G~DIKVytVG~~~vhAe~RKSP~~------------ 231 (879)
.|.|+. ++. ++.+....... +. ..+.+..+++||||+ |+|++|+++|+++++|+.|.+|.+
T Consensus 537 -~G~GV~-iv~~~v~~~eel~~a-l~~a~~~~~~vlVEefI~--G~Ei~v~Vlggkvvaai~R~p~~VvGDG~~ti~eLi 611 (757)
T 3ln7_A 537 -YGLGIT-IFQQGVQNREDFAKA-LEIAFREDKEVMVEDYLV--GTEYRFFVLGDETLAVLLRVPANVVGDSVHSVAELV 611 (757)
T ss_dssp -TTTTCE-ECSSCCCCHHHHHHH-HHHHHHHCSSEEEEECCC--SEEEEEEEETTEEEEEEEECCSEEEGGGCCCHHHHH
T ss_pred -CCCCEE-EECCCCCCHHHHHHH-HHHHHHCCCCEEEEECCC--CCEEEEEEECCEEEEEEEEECCCCCCCCCCCHHHHH
T ss_conf -978869-853789999999999-999871599499997689--968999999999999999865212588865699999
Q ss_pred ------------------------------------------CCE-----EEECCCCCCEEEEE--ECCHHHHHHHHHHH
Q ss_conf ------------------------------------------990-----23168999400136--28998999999999
Q 002799 232 ------------------------------------------DGV-----VMRNPDGKEVRYPV--LLTPNEKQMAREVC 262 (879)
Q Consensus 232 ------------------------------------------DG~-----vrrN~~gke~r~pv--~Lt~eEk~iA~kv~ 262 (879)
.|. +++|.+.||....+ .++++.+++|.+|+
T Consensus 612 ~~~n~~p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~Ge~v~L~~~~Nls~GG~~~dvtd~i~p~~~~~a~~aa 691 (757)
T 3ln7_A 612 AMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKDQLVQLRANSNISTGGDSIDMTDEMHESYKQLAVGIT 691 (757)
T ss_dssp HHHHTSTTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSSCEEECCSSCCGGGTCCEEECTTTSCHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHHH
T ss_conf 76156601256666764334545899999997399834469999999864255311696226254667999999999999
Q ss_pred HHHCCCEEEEEEEEEC---------CCCEEEECCCCCCCC
Q ss_conf 9927906389798658---------992799217952223
Q 002799 263 IAFRQAVCGFDLLRCE---------GRSYVCDVNGWSFVK 293 (879)
Q Consensus 263 ~afgq~VcGfDLLRs~---------g~syVcDVNG~SFvK 293 (879)
+++|+.|||||++..+ ++..|+|||+-+-..
T Consensus 692 ~~lGl~~~GvDli~~di~~p~~~~~~~~~iiEvN~~P~~~ 731 (757)
T 3ln7_A 692 KAMGAAVCGVDLIIPDLKQPATPNLTSWGVIEANFNPMMM 731 (757)
T ss_dssp HHHTCSEEEEEEEESCSSSCCCSSTTTCEEEEEESSCCHH
T ss_pred HHHCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHH
T ss_conf 9849988999999657654333467982899970886545
No 8
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=1.00 E-value=1 Score=173.17 Aligned_cols=258 Identities=17% Similarity=0.214 Sum_probs=169.9
Q ss_pred CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEE--EEECCCCCCCCCCCCCC-CCCEEECCCCCCCC-HHHHHHH
Q ss_conf 97777269999634865489548999998730697179--99177300158875677-74423234468983-7999999
Q 002799 1 MEVHKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEV--IHFGDKVILEDPIEKWP-ICDCLIAFYSSGYP-LEKAESY 76 (879)
Q Consensus 1 ~~~~~~~~iGvCaM~~Ka~SkPm~~IL~rL~~~~~f~i--iiF~d~~IL~~~ve~wP-~~D~lIsf~s~Gfp-L~kai~y 76 (879)
|...+..+|||+.-+++. |- .+...+.+.| +++ +++.-.. |...+- .+|+++...+.-+. ....++.
T Consensus 6 ~~~~~~m~i~il~~~~~~-s~---~l~~al~~~G-~~v~~~~~d~~~----~~~~~~~~~d~v~~~~~~~~~~~~~~l~~ 76 (324)
T 1z2n_X 6 MTTKQTVSLFIWLPESKQ-KT---LFISTKNHTQ-FELNNIIFDVTL----STELPDKEPNAIITKRTHPVGKMADEMRK 76 (324)
T ss_dssp ----CEEEEEEECCHHHH-HH---HBSSCCSEEE-EEETTEEEEEEE----ESSCCSSCCSEEEECCSCSSSHHHHHHHH
T ss_pred CCCCCCEEEEEEECHHHH-HH---HHHHHHHHCC-CEEEEEEECCCC----CCCCCCCCCEEEEEECCCHHHHHHHHHHH
T ss_conf 663776799999752655-53---4898877569-489999965898----71214897519999454418999999999
Q ss_pred HHH--CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEECCC
Q ss_conf 876--199535890146676339999999996899999789982467875554334554504551704057589950432
Q 002799 77 ATL--RKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHG 154 (879)
Q Consensus 77 ~~l--r~p~~iNdl~~q~~l~DR~~~~qiL~~~gIp~P~t~~~~r~~p~~~~~~~~e~~d~I~v~g~~~~kPfVeKpv~G 154 (879)
+.. .+.+++|+..+..++.||..++++|+++|||+|++..+.... +..+.+.-.| +++|+|+||..|
T Consensus 77 ~~~~~~g~~~~~~~~~~~~~~dK~~~~~~l~~~gi~~P~~~~~~~~~---------~~~~~~~~~~--~~~P~vvKP~~g 145 (324)
T 1z2n_X 77 YEKDHPKVLFLESSAIHDMMSSREEINALLIKNNIPIPNSFSVKSKE---------EVIQLLQSKQ--LILPFIVKPENA 145 (324)
T ss_dssp HHHHCTTSEEETCHHHHHHHTBHHHHHHHHHHTTCCCSCEEEESSHH---------HHHHHHHTTC--SCSSEEEEESBC
T ss_pred HHHHCCCCEEECCHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCHH---------HHHHHHHHCC--CCCCEEEEECCC
T ss_conf 99858997685879999987389999999997798999979967778---------8999999749--999889966888
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCC-C--
Q ss_conf 6762168702578872889973307876544555222346851699531588981038999878325888610799-9--
Q 002799 155 DDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPV-V-- 231 (879)
Q Consensus 155 edHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyEEFi~t~G~DIKVytVG~~~vhAe~RKSP~-~-- 231 (879)
. .|.|.. -...+.+.. .+. . .+..+|+||||+..|.|++|+++|+++.+++ |+++. +
T Consensus 146 ~-----------g~~~s~-gv~~v~~~~-~l~----~--~~~~~lvqe~i~~~g~~~~v~v~g~~~~~~~-~~~~~~~~~ 205 (324)
T 1z2n_X 146 Q-----------GTFNAH-QMKIVLEQE-GID----D--IHFPCLCQHYINHNNKIVKVFCIGNTLKWQT-RTSLPNVHR 205 (324)
T ss_dssp S-----------SSSGGG-EEEEECSGG-GGT----T--CCSSEEEEECCCCTTCEEEEEEETTEEEEEE-ECCCCCCCC
T ss_pred C-----------CCCCCE-EEEEEECHH-HHH----H--CCCCEEEEECCCCCCCEEEEEEECCEEEEEE-ECCCCCCCC
T ss_conf 7-----------886432-049973898-986----3--2897899975178996899999999999999-138664457
Q ss_pred ---------------------------------CCEEEECCCCCCEEEEEECC-HHHHHHHHHHHHHHCCCEEEEEEEEE
Q ss_conf ---------------------------------99023168999400136289-98999999999992790638979865
Q 002799 232 ---------------------------------DGVVMRNPDGKEVRYPVLLT-PNEKQMAREVCIAFRQAVCGFDLLRC 277 (879)
Q Consensus 232 ---------------------------------DG~vrrN~~gke~r~pv~Lt-~eEk~iA~kv~~afgq~VcGfDLLRs 277 (879)
.+.|+.|.+. +...+..++ ++.+++|.++++++|..+||||++..
T Consensus 206 g~~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~a~~~~~~lg~~~~~vD~~~~ 284 (324)
T 1z2n_X 206 CGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILE-DPILLNLTSEAEMRDLAYKVRCALGVQLCGIDFIKE 284 (324)
T ss_dssp SSCCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCS-CTTTTTSCCHHHHHHHHHHHHHHHTCSEEEEEEECG
T ss_pred CCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCC-CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 8866503215300233305555534334331134540003366-875556799799999999999984996771689977
Q ss_pred -C-CCCEEEECCCCCCCCCCHHHH
Q ss_conf -8-992799217952223531319
Q 002799 278 -E-GRSYVCDVNGWSFVKNSYKYY 299 (879)
Q Consensus 278 -~-g~syVcDVNG~SFvK~n~kYY 299 (879)
. |.+||+|||.++-...-..|.
T Consensus 285 ~~~g~~~vlEvN~~Pg~~~~~~~~ 308 (324)
T 1z2n_X 285 NEQGNPLVVDVNVFPSYGGKVDFD 308 (324)
T ss_dssp GGCSSCEEEEEEESCCTTSCBCHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCHH
T ss_conf 588988999974898767888889
No 9
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=1.00 E-value=1 Score=166.00 Aligned_cols=238 Identities=20% Similarity=0.198 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCC-CCCC--CCCCCCCCCC-EEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 548999998730697179991773-0015--8875677744-23234468983799999987619953589014667633
Q 002799 21 APMGQILDRLQAFGEFEVIHFGDK-VILE--DPIEKWPICD-CLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHD 96 (879)
Q Consensus 21 kPm~~IL~rL~~~~~f~iiiF~d~-~IL~--~~ve~wP~~D-~lIsf~s~GfpL~kai~y~~lr~p~~iNdl~~q~~l~D 96 (879)
...+.+...+.+.| ++++++... .... .....|+.+| ++++.++. +....+.+.++..+..++|+..+..+++|
T Consensus 11 ~~~~~~~~a~~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~l~~~g~~~~~~~~~~~~~~d 88 (280)
T 1uc8_A 11 PDERMLFERAEALG-LPYKKVYVPALPMVLGERPKELEGVTVALERCVSQ-SRGLAAARYLTALGIPVVNRPEVIEACGD 88 (280)
T ss_dssp HHHHHHHHHHHHHT-CCEEEEEGGGCCEETTBCCGGGTTCCEEEECCSSH-HHHHHHHHHHHHTTCCEESCHHHHHHHHB
T ss_pred HHHHHHHHHHHHCC-CCEEEEEHHHCEEECCCCCCCCCCCCEEEECCCCC-HHHHHHHHHHHHCCCCEECCHHHHHHHCC
T ss_conf 89999999999769-94799701460333267876367899999878650-23699999999879946089999988478
Q ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 99999999968999997899824678755543345545045517040575899504326762168702578872889973
Q 002799 97 RRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFR 176 (879)
Q Consensus 97 R~~~~qiL~~~gIp~P~t~~~~r~~p~~~~~~~~e~~d~I~v~g~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfr 176 (879)
|...+++|++.|||+|++..+... ++.... -..+++|+|+||..|. .|.|+. +++
T Consensus 89 K~~~~~~l~~~gi~~p~~~~~~~~------------~~~~~~-~~~~~~p~vvKp~~g~-----------~~~gv~-~v~ 143 (280)
T 1uc8_A 89 KWATSVALAKAGLPQPKTALATDR------------EEALRL-MEAFGYPVVLKPVIGS-----------WGRLLA-XXX 143 (280)
T ss_dssp HHHHHHHHHHTTCCCCCEEEESSH------------HHHHHH-HHHHCSSEEEECSBCC-----------BCSHHH-HHH
T ss_pred HHHHHHHHHHCCCCCCCEEEECCH------------HHHHHH-HHHHCCCEEEEECCCC-----------CCCCCE-ECC
T ss_conf 999999999869699995852899------------999999-9974998899978999-----------856634-303
Q ss_pred HCCCCCCCCCCCCCCCC--CCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCHHH
Q ss_conf 30787654455522234--6851699531588981038999878325888610799999023168999400136289989
Q 002799 177 KVGNRSSEFHPDVRRVR--REGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNE 254 (879)
Q Consensus 177 kign~sS~~~p~~~~~r--~~gsyIyEEFi~t~G~DIKVytVG~~~vhAe~RKSP~~DG~vrrN~~gke~r~pv~Lt~eE 254 (879)
....-...+.. ..... ....+|+||||+..+.|++|+++|++++++..|++ +.|+.|.+.++...|..++++.
T Consensus 144 ~~~el~~~~~~-~~~~~~~~~~~~lvqe~i~~~~~e~~v~v~~~~~~~~~~~~~----~~~~~~~~~g~~~~p~~l~~~~ 218 (280)
T 1uc8_A 144 XXXXXXXXXXX-KEVLGGFQHQLFYIQEYVEKPGRDIRVFVVGERAIAAIYRRS----AHWITNTARGGQAENCPLTEEV 218 (280)
T ss_dssp HHHC-------------CTTTTCEEEEECCCCSSCCEEEEEETTEEEEEEEC------------------CEECCCCHHH
T ss_pred CCCCCCHHHHH-HHHHCCCCCCCEEEEECCCCCCCEEEEEEECCEEEEEEEEEC----CCCCCCCCCCCCCCCCCCCHHH
T ss_conf 22221002566-766403678839998323799902999999999999999936----8833553478601578989999
Q ss_pred HHHHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCC
Q ss_conf 999999999927906389798658992799217952
Q 002799 255 KQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWS 290 (879)
Q Consensus 255 k~iA~kv~~afgq~VcGfDLLRs~g~syVcDVNG~S 290 (879)
+++|.++++++|..++|+|++...+++||+|||..+
T Consensus 219 ~~~~~~~~~~lg~g~~~vD~~~~~~g~~~iEiN~r~ 254 (280)
T 1uc8_A 219 ARLSVKAAEAVGGGVVAVDLFESERGLLVNEVNHTM 254 (280)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEEETTEEEEEEEETTC
T ss_pred HHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCC
T ss_conf 999999999739976899999808975999971898
No 10
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=1.00 E-value=1 Score=152.74 Aligned_cols=226 Identities=14% Similarity=0.121 Sum_probs=160.6
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCC-CC---------------C----------CCCCCCCCCEEECCCCCCCC-----HH
Q ss_conf 899999873069717999177300-15---------------8----------87567774423234468983-----79
Q 002799 23 MGQILDRLQAFGEFEVIHFGDKVI-LE---------------D----------PIEKWPICDCLIAFYSSGYP-----LE 71 (879)
Q Consensus 23 m~~IL~rL~~~~~f~iiiF~d~~I-L~---------------~----------~ve~wP~~D~lIsf~s~Gfp-----L~ 71 (879)
.+.+...+.+.| +++++|.-.-. .. . ....|..+|+++.+...++. ..
T Consensus 21 ~~~l~~a~~~~G-~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~ 99 (316)
T 1gsa_A 21 SFAMLLEAQRRG-YELHYMEMGDLYLINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVILMRKDPPFDTEFIYAT 99 (316)
T ss_dssp HHHHHHHHHHTT-CEEEEECGGGEEEETTEEEEEEEEEEECSCSSCCEEEEEEEEEEGGGSSEEEECCCCCCCHHHHHHH
T ss_pred HHHHHHHHHHCC-CEEEEECHHHEEEECCEEEEEEEEEEECCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHH
T ss_conf 999999999879-9799982358688778589997546863676540653675144465577999936998760268899
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEE
Q ss_conf 99999876199535890146676339999999996899999789982467875554334554504551704057589950
Q 002799 72 KAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKP 151 (879)
Q Consensus 72 kai~y~~lr~p~~iNdl~~q~~l~DR~~~~qiL~~~gIp~P~t~~~~r~~p~~~~~~~~e~~d~I~v~g~~~~kPfVeKp 151 (879)
..++.++..+.+++|+..+..++.||+.++++|. |+|+|..+... ++..... ..++ |+|+||
T Consensus 100 ~~~~~l~~~g~~~~~~~~~~~~~~dK~~~~~~l~----~~P~t~~~~~~------------~~~~~~~-~~~~-p~vvKP 161 (316)
T 1gsa_A 100 YILERAEEKGTLIVNKPQSLRDCNEKLFTAWFSD----LTPETLVTRNK------------AQLKAFW-EKHS-DIILKP 161 (316)
T ss_dssp HHHHHHHHTTCEEESCHHHHHHCCTTGGGGGGTT----TSCCEEEESCH------------HHHHHHH-HHHS-SEEEEC
T ss_pred HHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHH----CCCCEEEECCH------------HHHHHHH-HHCC-CEEEEE
T ss_conf 9999998769768459899875344799985552----29983875899------------9999999-9769-899998
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHCC-CCCCCCCCCCCCCC--CCCCEEEEECCCC-CCCEEEEEEECCCEEE-EEEE
Q ss_conf 4326762168702578872889973307-87654455522234--6851699531588-9810389998783258-8861
Q 002799 152 VHGDDHSIMIYYPSSAGGGMKELFRKVG-NRSSEFHPDVRRVR--REGSYIYEEFMPT-GGTDVKVYTVGPEYAH-AEAR 226 (879)
Q Consensus 152 v~GedHni~IYyp~~~GgG~~rLfrkig-n~sS~~~p~~~~~r--~~gsyIyEEFi~t-~G~DIKVytVG~~~vh-Ae~R 226 (879)
..|. .|.|+. . +. +. .++..-..... ....+|+||||+. .+.|++|+++|+++.+ +..|
T Consensus 162 ~~g~-----------~g~Gv~-~---v~~~~-~~l~~~~~~~~~~~~~~~lvqe~i~~~~~~~~~v~~~~g~~~~~~~~r 225 (316)
T 1gsa_A 162 LDGM-----------GGASIF-R---VKEGD-PNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEPVPYCLAR 225 (316)
T ss_dssp SSCC-----------TTTTCE-E---ECTTC-TTHHHHHHHHTTTTTSCEEEEECCGGGGGCEEEEEEETTEECSEEEEE
T ss_pred CCCC-----------CCCCEE-E---ECCCH-HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCEEEEEEEEE
T ss_conf 9899-----------855679-9---63872-889999999983589659996266789999779999999973368998
Q ss_pred ECCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHH---HCCCEEEEEEEEECCCCEEEECCCC
Q ss_conf 07999990231689994001362899899999999999---2790638979865899279921795
Q 002799 227 KSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIA---FRQAVCGFDLLRCEGRSYVCDVNGW 289 (879)
Q Consensus 227 KSP~~DG~vrrN~~gke~r~pv~Lt~eEk~iA~kv~~a---fgq~VcGfDLLRs~g~syVcDVNG~ 289 (879)
+++ .|.|+.|.+.|+...|..++++.+++|.+++++ +|..++|||++ |+||+|||..
T Consensus 226 ~~~--~~~~~~~~~~gg~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~vD~~----g~~~iEvN~r 285 (316)
T 1gsa_A 226 IPQ--GGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDII----GDRLTEINVT 285 (316)
T ss_dssp ECC--SSCSCCCGGGTCEEEEEECCHHHHHHHHHHHHHHHHTTCCEEEEEEE----TTEEEEEECS
T ss_pred ECC--CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC----CCEEEEECCC
T ss_conf 579--99732687059702247789899999999999997579848999962----8889999189
Done!