Query 002801
Match_columns 879
No_of_seqs 850 out of 6109
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 07:23:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002801.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002801hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00181 protein SPA1-RELATED; 100.0 1.1E-90 2.3E-95 847.7 71.7 735 55-879 53-793 (793)
2 KOG0271 Notchless-like WD40 re 100.0 4.3E-46 9.4E-51 376.2 28.9 311 534-877 128-479 (480)
3 KOG0271 Notchless-like WD40 re 100.0 1.4E-42 3.1E-47 350.8 28.6 308 541-878 86-438 (480)
4 KOG0272 U4/U6 small nuclear ri 100.0 1.6E-42 3.5E-47 355.5 24.1 282 566-877 173-458 (459)
5 KOG0272 U4/U6 small nuclear ri 100.0 1.7E-40 3.6E-45 340.7 23.9 262 537-821 191-458 (459)
6 KOG0615 Serine/threonine prote 100.0 1.2E-41 2.5E-46 351.6 6.9 210 27-331 225-446 (475)
7 KOG0581 Mitogen-activated prot 100.0 1.3E-40 2.7E-45 342.6 9.5 209 27-330 126-343 (364)
8 KOG0279 G protein beta subunit 100.0 3.4E-36 7.3E-41 294.1 33.4 299 561-878 8-312 (315)
9 KOG0284 Polyadenylation factor 100.0 3.2E-38 7E-43 322.3 18.5 279 569-877 97-378 (464)
10 KOG0591 NIMA (never in mitosis 100.0 4.7E-39 1E-43 316.1 9.4 220 4-316 40-275 (375)
11 KOG0265 U5 snRNP-specific prot 100.0 3E-36 6.5E-41 297.2 27.6 290 563-877 42-336 (338)
12 KOG0286 G-protein beta subunit 100.0 1.7E-35 3.7E-40 290.6 31.8 283 564-877 51-343 (343)
13 KOG0575 Polo-like serine/threo 100.0 5.4E-38 1.2E-42 341.1 11.2 204 28-327 68-274 (592)
14 KOG0661 MAPK related serine/th 100.0 4.9E-38 1.1E-42 330.3 9.0 208 27-328 57-297 (538)
15 KOG0286 G-protein beta subunit 100.0 9.5E-35 2.1E-39 285.4 30.9 272 534-821 68-343 (343)
16 KOG0588 Serine/threonine prote 100.0 2.2E-37 4.8E-42 336.6 13.1 212 22-330 56-271 (786)
17 KOG0592 3-phosphoinositide-dep 100.0 3.3E-37 7.1E-42 329.0 13.8 212 36-330 132-346 (604)
18 KOG0315 G-protein beta subunit 100.0 4.5E-35 9.7E-40 281.4 26.5 275 580-878 10-287 (311)
19 KOG0273 Beta-transducin family 100.0 2.4E-34 5.1E-39 299.0 32.2 309 536-878 194-522 (524)
20 KOG0598 Ribosomal protein S6 k 100.0 4.4E-37 9.5E-42 316.5 11.2 205 32-331 79-290 (357)
21 KOG0315 G-protein beta subunit 100.0 3.4E-34 7.3E-39 275.4 30.2 277 535-832 12-297 (311)
22 KOG0660 Mitogen-activated prot 100.0 2.1E-37 4.5E-42 317.5 7.4 240 7-337 46-325 (359)
23 KOG0295 WD40 repeat-containing 100.0 1.1E-34 2.3E-39 292.9 25.4 283 564-877 104-404 (406)
24 KOG0583 Serine/threonine prote 100.0 2.5E-36 5.4E-41 331.3 12.2 204 28-327 69-280 (370)
25 KOG0198 MEKK and related serin 100.0 1.8E-36 3.8E-41 318.7 9.4 216 27-330 63-284 (313)
26 KOG0285 Pleiotropic regulator 100.0 5.8E-34 1.3E-38 286.2 26.8 289 564-877 147-437 (460)
27 KOG0645 WD40 repeat protein [G 100.0 5.3E-33 1.2E-37 270.6 32.2 292 563-878 9-310 (312)
28 KOG0578 p21-activated serine/t 100.0 6.1E-36 1.3E-40 322.6 12.5 209 27-331 319-532 (550)
29 KOG0263 Transcription initiati 100.0 5.3E-34 1.2E-38 314.8 27.8 251 566-826 376-652 (707)
30 KOG0593 Predicted protein kina 100.0 3.4E-36 7.4E-41 299.0 9.1 227 7-327 26-289 (396)
31 KOG0595 Serine/threonine-prote 100.0 4E-36 8.7E-41 311.5 9.2 228 7-329 34-275 (429)
32 KOG0273 Beta-transducin family 100.0 1.3E-33 2.8E-38 293.5 27.3 287 566-878 176-481 (524)
33 KOG0616 cAMP-dependent protein 100.0 7.3E-36 1.6E-40 296.4 9.7 197 34-329 100-304 (355)
34 KOG0605 NDR and related serine 100.0 1.1E-35 2.3E-40 318.1 11.6 259 21-332 186-455 (550)
35 KOG0318 WD40 repeat stress pro 100.0 2E-32 4.4E-37 287.9 35.6 310 537-878 206-601 (603)
36 KOG0600 Cdc2-related protein k 100.0 1.5E-35 3.2E-40 314.0 12.0 236 4-330 138-408 (560)
37 KOG0033 Ca2+/calmodulin-depend 100.0 2.4E-35 5.1E-40 284.3 11.6 198 34-327 66-272 (355)
38 KOG0192 Tyrosine kinase specif 100.0 5.4E-35 1.2E-39 317.4 13.0 223 5-321 61-298 (362)
39 KOG0610 Putative serine/threon 100.0 1.2E-34 2.5E-39 300.5 14.6 272 24-333 123-403 (459)
40 KOG0291 WD40-repeat-containing 100.0 8.1E-32 1.8E-36 293.8 36.9 321 534-878 278-611 (893)
41 KOG0277 Peroxisomal targeting 100.0 3.8E-33 8.2E-38 269.0 23.3 282 572-877 12-307 (311)
42 KOG0663 Protein kinase PITSLRE 100.0 3.4E-35 7.4E-40 295.7 8.7 214 28-333 125-372 (419)
43 KOG0659 Cdk activating kinase 100.0 2.2E-34 4.7E-39 281.9 12.8 236 5-334 24-293 (318)
44 cd00200 WD40 WD40 domain, foun 100.0 2.6E-31 5.6E-36 283.3 37.0 284 563-877 4-289 (289)
45 KOG0276 Vesicle coat complex C 100.0 2.3E-32 5E-37 292.1 27.8 281 564-875 9-295 (794)
46 KOG0284 Polyadenylation factor 100.0 1.3E-33 2.8E-38 288.6 16.9 274 531-826 106-383 (464)
47 KOG0295 WD40 repeat-containing 100.0 1.2E-32 2.5E-37 278.2 23.5 266 537-822 124-405 (406)
48 KOG4721 Serine/threonine prote 100.0 3.5E-34 7.6E-39 304.8 12.9 205 25-324 159-366 (904)
49 KOG0585 Ca2+/calmodulin-depend 100.0 2.1E-34 4.6E-39 302.3 10.2 214 27-328 157-378 (576)
50 KOG0263 Transcription initiati 100.0 3.4E-32 7.3E-37 300.6 25.3 238 617-878 378-648 (707)
51 KOG0282 mRNA splicing factor [ 100.0 5.5E-33 1.2E-37 290.2 17.8 290 563-877 209-503 (503)
52 KOG0604 MAP kinase-activated p 100.0 6.3E-34 1.4E-38 282.3 9.7 228 7-328 86-328 (400)
53 KOG0266 WD40 repeat-containing 100.0 4.5E-31 9.7E-36 300.9 34.6 284 566-877 157-452 (456)
54 KOG0599 Phosphorylase kinase g 100.0 5E-34 1.1E-38 279.1 8.7 197 35-327 80-288 (411)
55 KOG0594 Protein kinase PCTAIRE 100.0 1.8E-33 3.9E-38 290.1 12.2 218 22-333 57-313 (323)
56 KOG0319 WD40-repeat-containing 100.0 1.8E-31 3.9E-36 291.3 28.4 308 533-877 293-617 (775)
57 KOG0279 G protein beta subunit 100.0 4.3E-31 9.3E-36 258.5 27.7 239 614-878 12-261 (315)
58 KOG0694 Serine/threonine prote 100.0 1.3E-33 2.8E-38 310.3 10.9 201 36-333 427-635 (694)
59 KOG1035 eIF-2alpha kinase GCN2 100.0 5.2E-33 1.1E-37 320.9 15.8 200 54-327 669-876 (1351)
60 KOG0611 Predicted serine/threo 100.0 2.1E-33 4.6E-38 287.9 10.4 197 31-326 106-307 (668)
61 KOG0293 WD40 repeat-containing 100.0 1.7E-31 3.6E-36 273.1 23.8 288 562-878 218-512 (519)
62 KOG0316 Conserved WD40 repeat- 100.0 4.7E-31 1E-35 251.7 24.9 277 564-876 13-296 (307)
63 KOG0296 Angio-associated migra 100.0 1.8E-30 3.8E-35 262.7 30.3 304 537-878 80-397 (399)
64 KOG0281 Beta-TrCP (transducin 100.0 2.1E-32 4.6E-37 273.5 15.8 278 567-879 196-477 (499)
65 KOG0597 Serine-threonine prote 100.0 2E-33 4.3E-38 299.6 8.1 199 32-327 55-256 (808)
66 KOG0318 WD40 repeat stress pro 100.0 1.6E-29 3.5E-34 266.1 37.0 290 563-878 142-559 (603)
67 KOG0291 WD40-repeat-containing 100.0 9.4E-30 2E-34 277.7 36.2 319 534-879 158-508 (893)
68 KOG0579 Ste20-like serine/thre 100.0 1E-32 2.2E-37 296.1 12.8 211 28-331 79-298 (1187)
69 KOG0589 Serine/threonine prote 100.0 4.4E-33 9.5E-38 299.8 9.1 208 27-327 52-263 (426)
70 KOG0032 Ca2+/calmodulin-depend 100.0 3.2E-32 6.9E-37 298.4 15.1 201 32-328 89-299 (382)
71 KOG0582 Ste20-like serine/thre 100.0 1.3E-32 2.7E-37 287.5 10.5 215 24-329 72-300 (516)
72 KOG0313 Microtubule binding pr 100.0 2.7E-30 5.8E-35 262.4 27.0 270 534-822 116-417 (423)
73 KOG0201 Serine/threonine prote 100.0 2.2E-33 4.9E-38 293.2 4.3 206 28-327 61-268 (467)
74 cd05571 STKc_PKB Catalytic dom 100.0 2.3E-32 5.1E-37 300.2 11.6 204 30-329 47-258 (323)
75 KOG0580 Serine/threonine prote 100.0 3.7E-32 8E-37 262.6 11.3 202 28-327 72-278 (281)
76 KOG0277 Peroxisomal targeting 100.0 1.9E-30 4.2E-35 250.4 21.9 244 566-821 58-307 (311)
77 cd05612 STKc_PRKX_like Catalyt 100.0 5.9E-32 1.3E-36 292.5 11.5 200 31-329 54-261 (291)
78 cd05585 STKc_YPK1_like Catalyt 100.0 7.8E-32 1.7E-36 294.6 12.1 203 30-328 45-253 (312)
79 KOG0275 Conserved WD40 repeat- 100.0 6E-31 1.3E-35 260.7 16.8 290 489-821 208-507 (508)
80 KOG0658 Glycogen synthase kina 100.0 1.2E-32 2.6E-37 283.0 4.9 209 31-331 70-315 (364)
81 PTZ00426 cAMP-dependent protei 100.0 7.2E-32 1.6E-36 297.8 11.4 200 31-329 84-291 (340)
82 KOG4717 Serine/threonine prote 100.0 8E-32 1.7E-36 283.7 10.8 228 4-330 39-278 (864)
83 PTZ00263 protein kinase A cata 100.0 8.4E-32 1.8E-36 296.5 11.5 199 31-328 71-277 (329)
84 KOG1407 WD40 repeat protein [F 100.0 2.6E-29 5.7E-34 243.5 27.0 287 561-877 13-309 (313)
85 KOG0772 Uncharacterized conser 100.0 7.2E-30 1.6E-34 267.7 24.9 291 563-876 162-484 (641)
86 cd07862 STKc_CDK6 Catalytic do 100.0 1.5E-31 3.2E-36 289.4 12.4 201 32-325 58-290 (290)
87 KOG0266 WD40 repeat-containing 100.0 2.1E-29 4.6E-34 287.1 30.2 268 537-823 175-454 (456)
88 KOG0276 Vesicle coat complex C 100.0 8.9E-30 1.9E-34 272.4 25.2 239 616-877 12-255 (794)
89 cd05590 STKc_nPKC_eta Catalyti 100.0 2.3E-31 5E-36 291.8 13.6 199 35-329 53-260 (320)
90 cd05595 STKc_PKB_beta Catalyti 100.0 1.9E-31 4.2E-36 292.9 12.3 203 31-329 48-258 (323)
91 cd05593 STKc_PKB_gamma Catalyt 100.0 2.1E-31 4.5E-36 293.1 12.5 202 31-328 48-257 (328)
92 KOG0281 Beta-TrCP (transducin 100.0 6E-31 1.3E-35 263.2 14.5 273 526-828 203-482 (499)
93 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.8E-31 3.9E-36 290.7 11.5 209 28-330 53-296 (303)
94 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.4E-31 5.2E-36 287.4 12.0 202 30-325 55-288 (288)
95 KOG0319 WD40-repeat-containing 100.0 1.3E-29 2.8E-34 276.9 25.4 271 534-822 337-618 (775)
96 cd05631 STKc_GRK4 Catalytic do 100.0 3.3E-31 7.2E-36 285.8 12.6 205 30-329 52-268 (285)
97 PTZ00283 serine/threonine prot 100.0 7.5E-31 1.6E-35 302.8 16.2 213 28-329 81-304 (496)
98 KOG0197 Tyrosine kinases [Sign 100.0 2.4E-31 5.2E-36 287.1 11.1 205 21-320 246-455 (468)
99 KOG0288 WD40 repeat protein Ti 100.0 1.5E-30 3.3E-35 266.7 16.4 288 564-877 171-459 (459)
100 KOG0282 mRNA splicing factor [ 100.0 2.5E-30 5.4E-35 270.4 18.0 268 533-821 227-503 (503)
101 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.6E-31 1.2E-35 290.7 13.4 202 31-329 54-264 (333)
102 cd05620 STKc_nPKC_delta Cataly 100.0 6.2E-31 1.4E-35 287.9 13.6 199 35-329 53-255 (316)
103 cd05591 STKc_nPKC_epsilon Cata 100.0 6.8E-31 1.5E-35 288.4 13.9 198 36-329 54-261 (321)
104 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.4E-31 7.3E-36 293.3 11.5 213 28-330 49-298 (338)
105 PTZ00267 NIMA-related protein 100.0 4.1E-31 8.9E-36 305.0 12.4 207 29-327 116-328 (478)
106 KOG0596 Dual specificity; seri 100.0 2.9E-31 6.2E-36 283.4 10.2 223 15-332 398-637 (677)
107 cd05628 STKc_NDR1 Catalytic do 100.0 7.5E-31 1.6E-35 293.1 13.7 239 31-329 54-300 (363)
108 cd05594 STKc_PKB_alpha Catalyt 100.0 2.4E-31 5.1E-36 292.6 9.4 203 31-329 48-259 (325)
109 KOG0275 Conserved WD40 repeat- 100.0 1.9E-30 4.1E-35 257.2 14.8 287 565-877 210-507 (508)
110 cd05592 STKc_nPKC_theta_delta 100.0 9E-31 1.9E-35 286.6 13.8 199 35-329 53-255 (316)
111 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.4E-31 1.4E-35 292.5 12.7 232 31-328 54-291 (350)
112 cd05614 STKc_MSK2_N N-terminal 100.0 7.5E-31 1.6E-35 289.6 13.1 199 36-328 63-273 (332)
113 cd07848 STKc_CDKL5 Catalytic d 100.0 9.5E-31 2.1E-35 282.6 13.4 203 30-325 52-287 (287)
114 KOG0612 Rho-associated, coiled 100.0 2.5E-31 5.4E-36 304.6 9.2 213 19-327 118-343 (1317)
115 cd05588 STKc_aPKC Catalytic do 100.0 9.3E-31 2E-35 288.2 13.3 198 36-328 54-268 (329)
116 cd05575 STKc_SGK Catalytic dom 100.0 9E-31 2E-35 287.7 13.0 200 33-328 51-257 (323)
117 cd05584 STKc_p70S6K Catalytic 100.0 1.2E-30 2.7E-35 286.5 14.0 202 31-328 53-262 (323)
118 cd05589 STKc_PKN Catalytic dom 100.0 1E-30 2.2E-35 287.4 13.3 201 32-329 56-264 (324)
119 KOG0306 WD40-repeat-containing 100.0 1.2E-28 2.7E-33 268.9 29.1 308 537-878 338-663 (888)
120 cd05596 STKc_ROCK Catalytic do 100.0 1.1E-30 2.3E-35 292.0 13.5 204 31-328 96-310 (370)
121 cd07863 STKc_CDK4 Catalytic do 100.0 1.2E-30 2.7E-35 281.8 13.4 201 32-325 56-288 (288)
122 cd05587 STKc_cPKC Catalytic do 100.0 6.3E-31 1.4E-35 289.1 11.3 202 32-328 54-263 (324)
123 cd05619 STKc_nPKC_theta Cataly 100.0 1.4E-30 3E-35 285.1 13.6 199 35-329 53-255 (316)
124 KOG0313 Microtubule binding pr 100.0 1.1E-28 2.4E-33 250.7 26.3 282 563-877 100-416 (423)
125 cd07868 STKc_CDK8 Catalytic do 100.0 1.4E-30 3E-35 285.6 13.5 209 28-325 48-317 (317)
126 cd05618 STKc_aPKC_iota Catalyt 100.0 1.3E-30 2.8E-35 286.9 13.3 199 35-328 53-268 (329)
127 KOG0643 Translation initiation 100.0 1.2E-28 2.6E-33 239.6 25.1 293 564-877 6-315 (327)
128 KOG0292 Vesicle coat complex C 100.0 1.1E-28 2.4E-33 272.7 28.1 284 566-878 7-320 (1202)
129 cd05601 STKc_CRIK Catalytic do 100.0 4.3E-31 9.3E-36 291.3 9.1 204 32-328 55-269 (330)
130 PHA03212 serine/threonine kina 100.0 9E-31 1.9E-35 294.0 11.5 209 29-331 134-385 (391)
131 KOG1446 Histone H3 (Lys4) meth 100.0 1.4E-27 2.9E-32 238.9 32.6 278 567-876 13-300 (311)
132 cd00200 WD40 WD40 domain, foun 100.0 1.3E-27 2.8E-32 254.7 35.1 265 535-821 23-289 (289)
133 PHA02988 hypothetical protein; 100.0 1.4E-30 3E-35 280.4 12.3 199 28-321 68-274 (283)
134 cd05621 STKc_ROCK2 Catalytic d 100.0 1E-30 2.2E-35 292.0 11.3 203 32-328 97-310 (370)
135 cd05626 STKc_LATS2 Catalytic d 100.0 1.3E-30 2.9E-35 293.0 12.2 251 31-328 54-311 (381)
136 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-30 2.5E-35 293.7 11.5 251 31-329 54-312 (382)
137 KOG0603 Ribosomal protein S6 k 100.0 1.4E-30 3.1E-35 285.2 11.6 194 31-325 369-566 (612)
138 PTZ00036 glycogen synthase kin 100.0 1.3E-30 2.9E-35 297.3 11.7 209 30-330 111-359 (440)
139 cd05599 STKc_NDR_like Catalyti 100.0 1.4E-30 3E-35 291.4 11.5 242 31-329 54-303 (364)
140 cd05586 STKc_Sck1_like Catalyt 100.0 1.1E-30 2.4E-35 288.0 10.4 199 36-329 54-260 (330)
141 cd05604 STKc_SGK3 Catalytic do 100.0 1.5E-30 3.3E-35 286.2 11.4 201 32-328 50-257 (325)
142 KOG0293 WD40 repeat-containing 100.0 8E-29 1.7E-33 253.5 23.0 270 535-823 238-513 (519)
143 KOG0584 Serine/threonine prote 100.0 6.5E-31 1.4E-35 286.4 8.2 206 27-328 90-302 (632)
144 KOG0285 Pleiotropic regulator 100.0 7.1E-29 1.5E-33 249.7 22.2 239 614-878 148-388 (460)
145 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.1E-30 8.9E-35 284.5 14.8 196 36-321 69-329 (338)
146 KOG4279 Serine/threonine prote 100.0 3.2E-31 7E-36 287.6 5.7 226 10-328 602-838 (1226)
147 cd05616 STKc_cPKC_beta Catalyt 100.0 2.2E-30 4.8E-35 284.6 12.4 184 53-329 73-264 (323)
148 KOG4645 MAPKKK (MAP kinase kin 100.0 1.2E-31 2.7E-36 310.9 2.5 232 7-328 1259-1500(1509)
149 cd05570 STKc_PKC Catalytic dom 100.0 3.2E-30 7E-35 282.6 13.6 197 36-328 54-258 (318)
150 KOG0640 mRNA cleavage stimulat 100.0 7.1E-29 1.5E-33 245.2 21.5 292 563-877 107-424 (430)
151 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.2E-30 4.7E-35 285.0 12.1 199 36-329 54-267 (327)
152 cd05608 STKc_GRK1 Catalytic do 100.0 2E-30 4.4E-35 278.9 11.4 205 31-329 46-264 (280)
153 KOG0640 mRNA cleavage stimulat 100.0 5.4E-29 1.2E-33 246.0 20.0 291 492-823 110-426 (430)
154 PHA03209 serine/threonine kina 100.0 3.2E-30 6.9E-35 287.1 12.6 202 31-327 110-356 (357)
155 KOG0268 Sof1-like rRNA process 100.0 1.9E-29 4.1E-34 254.6 16.9 269 534-827 80-349 (433)
156 cd05603 STKc_SGK2 Catalytic do 100.0 3.9E-30 8.4E-35 282.5 13.0 201 32-328 50-257 (321)
157 cd06649 PKc_MEK2 Catalytic dom 100.0 3.7E-30 7.9E-35 283.8 12.8 202 30-328 55-307 (331)
158 cd05602 STKc_SGK1 Catalytic do 100.0 4E-30 8.7E-35 282.8 12.9 201 32-328 50-257 (325)
159 cd05629 STKc_NDR_like_fungal C 100.0 3.1E-30 6.6E-35 289.8 12.2 250 31-328 54-311 (377)
160 cd05582 STKc_RSK_N N-terminal 100.0 1.2E-30 2.5E-35 286.3 8.4 205 28-328 48-260 (318)
161 cd05598 STKc_LATS Catalytic do 100.0 1.7E-30 3.8E-35 291.8 9.2 246 31-328 54-307 (376)
162 KOG0577 Serine/threonine prote 100.0 2.2E-30 4.7E-35 277.1 9.1 204 32-333 80-289 (948)
163 KOG0310 Conserved WD40 repeat- 100.0 3.1E-28 6.7E-33 255.4 25.1 280 566-876 24-306 (487)
164 cd05627 STKc_NDR2 Catalytic do 100.0 4.7E-30 1E-34 286.4 12.4 238 32-329 55-300 (360)
165 cd06625 STKc_MEKK3_like Cataly 100.0 6.1E-30 1.3E-34 272.4 12.6 204 31-325 57-263 (263)
166 cd05623 STKc_MRCK_alpha Cataly 100.0 6.5E-30 1.4E-34 281.9 13.1 205 33-329 56-273 (332)
167 cd07875 STKc_JNK1 Catalytic do 100.0 7.3E-30 1.6E-34 285.4 13.1 204 29-328 74-324 (364)
168 KOG0645 WD40 repeat protein [G 100.0 2.2E-27 4.8E-32 231.6 28.5 271 535-823 29-311 (312)
169 KOG0607 MAP kinase-interacting 100.0 2.3E-30 5E-35 258.7 8.0 238 5-329 100-368 (463)
170 cd05615 STKc_cPKC_alpha Cataly 100.0 9.6E-30 2.1E-34 279.4 13.8 201 34-329 56-264 (323)
171 KOG0690 Serine/threonine prote 100.0 5.2E-30 1.1E-34 256.4 10.3 188 51-331 238-433 (516)
172 PHA03211 serine/threonine kina 100.0 5.1E-30 1.1E-34 291.3 11.6 205 31-327 213-460 (461)
173 PTZ00284 protein kinase; Provi 100.0 7.6E-30 1.6E-34 294.4 13.2 179 54-328 205-444 (467)
174 cd07876 STKc_JNK2 Catalytic do 100.0 8.4E-30 1.8E-34 284.3 13.0 205 28-328 70-321 (359)
175 KOG0292 Vesicle coat complex C 100.0 1.4E-28 3E-33 272.0 22.1 246 617-878 9-279 (1202)
176 PLN00034 mitogen-activated pro 100.0 7.9E-30 1.7E-34 283.8 12.6 201 31-329 125-335 (353)
177 cd05597 STKc_DMPK_like Catalyt 100.0 1.3E-29 2.8E-34 279.3 14.2 204 33-328 56-272 (331)
178 KOG0667 Dual-specificity tyros 100.0 3E-30 6.5E-35 284.3 8.8 225 6-327 209-507 (586)
179 cd05622 STKc_ROCK1 Catalytic d 100.0 1.1E-29 2.3E-34 284.0 13.4 203 32-328 97-310 (371)
180 PTZ00266 NIMA-related protein 100.0 6E-30 1.3E-34 303.3 11.3 206 30-328 64-301 (1021)
181 KOG0665 Jun-N-terminal kinase 100.0 4.2E-30 9.2E-35 258.3 8.4 226 5-326 38-314 (369)
182 cd05607 STKc_GRK7 Catalytic do 100.0 1.2E-29 2.6E-34 272.5 12.6 205 31-329 46-261 (277)
183 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-29 2.6E-34 278.1 12.7 208 29-325 49-317 (317)
184 cd06637 STKc_TNIK Catalytic do 100.0 1.9E-29 4.2E-34 270.0 14.0 199 36-325 61-272 (272)
185 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-29 2.4E-34 277.3 12.3 205 31-329 57-293 (309)
186 cd07874 STKc_JNK3 Catalytic do 100.0 7.9E-30 1.7E-34 284.2 11.3 206 28-329 66-318 (355)
187 PLN00181 protein SPA1-RELATED; 100.0 4.6E-27 9.9E-32 287.8 35.9 278 534-822 496-792 (793)
188 cd07853 STKc_NLK Catalytic dom 100.0 1.6E-29 3.5E-34 283.4 12.9 209 28-328 49-294 (372)
189 cd05605 STKc_GRK4_like Catalyt 100.0 1.7E-29 3.6E-34 272.6 12.5 205 30-329 52-268 (285)
190 KOG1989 ARK protein kinase fam 100.0 5E-30 1.1E-34 291.5 8.7 202 35-322 92-307 (738)
191 PHA03207 serine/threonine kina 100.0 1.4E-29 3E-34 285.6 11.9 208 28-328 136-381 (392)
192 KOG0283 WD40 repeat-containing 100.0 9.7E-28 2.1E-32 267.8 26.0 251 562-823 260-576 (712)
193 KOG0264 Nucleosome remodeling 100.0 5.5E-28 1.2E-32 252.0 22.5 261 614-879 121-404 (422)
194 cd05624 STKc_MRCK_beta Catalyt 100.0 1.7E-29 3.7E-34 278.4 11.9 205 32-328 55-272 (331)
195 KOG0265 U5 snRNP-specific prot 100.0 2.5E-27 5.4E-32 234.3 25.8 268 533-821 59-336 (338)
196 cd08223 STKc_Nek4 Catalytic do 100.0 2.5E-29 5.3E-34 266.8 12.7 202 31-325 52-257 (257)
197 cd06650 PKc_MEK1 Catalytic dom 100.0 1.4E-29 3E-34 279.3 11.1 202 31-328 56-305 (333)
198 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.6E-29 3.4E-34 280.4 11.6 207 28-331 64-307 (343)
199 KOG0264 Nucleosome remodeling 100.0 9.7E-28 2.1E-32 250.2 23.5 259 565-823 121-404 (422)
200 cd08529 STKc_FA2-like Catalyti 100.0 6.1E-29 1.3E-33 263.5 14.8 201 31-325 52-256 (256)
201 KOG0316 Conserved WD40 repeat- 100.0 1.5E-27 3.3E-32 227.8 22.7 241 615-879 15-257 (307)
202 KOG0586 Serine/threonine prote 100.0 1.1E-29 2.4E-34 276.8 9.2 208 27-331 104-315 (596)
203 cd06651 STKc_MEKK3 Catalytic d 100.0 3.8E-29 8.3E-34 266.9 12.0 206 31-326 57-265 (266)
204 cd06644 STKc_STK10_LOK Catalyt 100.0 8.7E-29 1.9E-33 268.0 14.8 208 31-332 62-279 (292)
205 KOG0696 Serine/threonine prote 100.0 5.4E-29 1.2E-33 256.2 12.1 188 53-333 422-617 (683)
206 cd07839 STKc_CDK5 Catalytic do 100.0 3.1E-29 6.8E-34 270.3 10.9 201 31-325 52-284 (284)
207 cd06643 STKc_SLK Catalytic dom 100.0 6.9E-29 1.5E-33 267.3 13.4 205 31-328 55-268 (282)
208 KOG0983 Mitogen-activated prot 100.0 1E-29 2.2E-34 249.3 6.1 197 36-328 149-355 (391)
209 cd05633 STKc_GRK3 Catalytic do 100.0 5.5E-29 1.2E-33 267.6 12.4 199 35-329 54-262 (279)
210 cd05630 STKc_GRK6 Catalytic do 100.0 3.8E-29 8.3E-34 269.7 11.2 204 31-328 53-267 (285)
211 KOG1240 Protein kinase contain 100.0 7.2E-26 1.6E-30 259.0 38.1 321 548-877 1034-1431(1431)
212 KOG0666 Cyclin C-dependent kin 100.0 1.7E-29 3.8E-34 251.8 7.6 208 34-331 83-346 (438)
213 cd06645 STKc_MAP4K3 Catalytic 100.0 4.9E-29 1.1E-33 266.2 11.6 200 31-324 59-267 (267)
214 cd08227 PK_STRAD_alpha Pseudok 100.0 6.1E-29 1.3E-33 273.7 12.7 211 32-328 53-313 (327)
215 KOG0986 G protein-coupled rece 100.0 4.9E-29 1.1E-33 260.3 11.0 190 49-330 253-454 (591)
216 cd06631 STKc_YSK4 Catalytic do 100.0 5.6E-29 1.2E-33 265.4 11.8 207 31-325 55-265 (265)
217 PHA03390 pk1 serine/threonine- 100.0 6.3E-29 1.4E-33 265.3 12.1 193 36-326 67-266 (267)
218 KOG0269 WD40 repeat-containing 100.0 5.9E-28 1.3E-32 265.0 19.5 287 570-874 41-335 (839)
219 KOG0296 Angio-associated migra 100.0 1.3E-26 2.8E-31 234.8 27.7 283 563-878 59-355 (399)
220 KOG0268 Sof1-like rRNA process 100.0 5.1E-28 1.1E-32 244.3 17.5 281 562-877 60-343 (433)
221 KOG1187 Serine/threonine prote 100.0 6.2E-29 1.4E-33 272.3 11.9 221 7-321 98-347 (361)
222 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.7E-28 3.6E-33 264.3 14.5 199 36-325 71-282 (282)
223 KOG0574 STE20-like serine/thre 100.0 1E-29 2.2E-34 251.6 4.6 201 37-331 87-292 (502)
224 cd06652 STKc_MEKK2 Catalytic d 100.0 1.1E-28 2.4E-33 263.1 12.7 206 31-326 57-265 (265)
225 cd05574 STKc_phototropin_like 100.0 1.4E-28 3E-33 269.6 13.7 236 30-329 53-296 (316)
226 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.4E-28 3E-33 262.7 13.1 206 31-325 59-267 (267)
227 PTZ00421 coronin; Provisional 100.0 5.7E-26 1.2E-30 257.8 35.1 274 568-860 20-315 (493)
228 cd06655 STKc_PAK2 Catalytic do 100.0 1.2E-28 2.7E-33 267.2 12.7 204 31-329 69-276 (296)
229 cd06658 STKc_PAK5 Catalytic do 100.0 5.8E-29 1.3E-33 269.2 9.9 207 30-332 71-282 (292)
230 cd07832 STKc_CCRK Catalytic do 100.0 1.2E-28 2.6E-33 265.9 12.2 203 31-326 52-286 (286)
231 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.3E-28 2.8E-33 262.9 12.3 201 28-321 56-260 (266)
232 cd08217 STKc_Nek2 Catalytic do 100.0 1.6E-28 3.5E-33 261.4 13.1 203 31-325 52-265 (265)
233 cd07831 STKc_MOK Catalytic dom 100.0 2.6E-28 5.5E-33 262.8 14.7 196 36-325 56-282 (282)
234 cd06609 STKc_MST3_like Catalyt 100.0 3.4E-28 7.4E-33 260.8 15.6 203 32-330 53-259 (274)
235 KOG0310 Conserved WD40 repeat- 100.0 8.3E-27 1.8E-31 244.7 25.4 262 542-824 47-310 (487)
236 cd06654 STKc_PAK1 Catalytic do 100.0 1.6E-28 3.5E-33 266.3 13.0 204 32-330 71-278 (296)
237 KOG0301 Phospholipase A2-activ 100.0 6.3E-27 1.4E-31 254.2 25.1 275 564-878 10-287 (745)
238 cd06605 PKc_MAPKK Catalytic do 100.0 9.9E-29 2.1E-33 263.4 10.9 202 32-328 53-263 (265)
239 cd08221 STKc_Nek9 Catalytic do 100.0 1.5E-28 3.3E-33 260.6 12.3 201 31-325 52-256 (256)
240 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.1E-28 6.6E-33 263.0 14.7 208 30-330 51-274 (287)
241 cd05104 PTKc_Kit Catalytic dom 100.0 2.3E-28 5E-33 273.8 14.2 196 36-322 97-370 (375)
242 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.6E-28 3.4E-33 267.2 12.4 206 30-329 56-293 (301)
243 KOG0671 LAMMER dual specificit 100.0 1.1E-28 2.4E-33 254.0 10.1 203 51-329 161-413 (415)
244 cd05106 PTKc_CSF-1R Catalytic 100.0 1.8E-28 3.8E-33 274.5 12.7 195 36-321 100-367 (374)
245 cd06611 STKc_SLK_like Catalyti 100.0 2.9E-28 6.3E-33 262.2 13.9 204 31-328 55-268 (280)
246 cd05632 STKc_GRK5 Catalytic do 100.0 1.8E-28 3.9E-33 264.5 12.2 205 31-329 53-268 (285)
247 cd06612 STKc_MST1_2 Catalytic 100.0 1.9E-28 4.1E-33 259.7 12.1 198 34-325 54-256 (256)
248 cd06656 STKc_PAK3 Catalytic do 100.0 9.5E-29 2.1E-33 268.3 9.9 206 31-331 69-278 (297)
249 KOG0647 mRNA export protein (c 100.0 3.9E-26 8.4E-31 226.0 27.3 276 566-870 25-315 (347)
250 KOG0274 Cdc4 and related F-box 100.0 2.4E-26 5.3E-31 261.0 29.7 274 567-878 207-481 (537)
251 KOG0193 Serine/threonine prote 100.0 4.9E-29 1.1E-33 269.8 7.3 206 21-321 433-648 (678)
252 cd06648 STKc_PAK_II Catalytic 100.0 2.3E-28 5.1E-33 263.6 12.7 206 31-332 69-279 (285)
253 cd07841 STKc_CDK7 Catalytic do 100.0 2E-28 4.4E-33 266.0 12.3 207 31-331 55-291 (298)
254 cd05111 PTK_HER3 Pseudokinase 100.0 2.9E-28 6.3E-33 262.0 13.2 198 31-321 62-263 (279)
255 cd05054 PTKc_VEGFR Catalytic d 100.0 3.7E-28 8.1E-33 268.1 14.4 197 36-322 69-329 (337)
256 cd05048 PTKc_Ror Catalytic Dom 100.0 2.1E-28 4.6E-33 263.6 12.1 200 31-322 61-279 (283)
257 cd06619 PKc_MKK5 Catalytic dom 100.0 5.6E-28 1.2E-32 259.9 15.2 203 31-333 52-264 (279)
258 cd05572 STKc_cGK_PKG Catalytic 100.0 4.4E-28 9.5E-33 258.0 14.2 202 32-328 47-258 (262)
259 cd05108 PTKc_EGFR Catalytic do 100.0 2.3E-28 5E-33 267.8 12.4 199 31-322 62-264 (316)
260 cd07861 STKc_CDK1_euk Catalyti 100.0 1.7E-28 3.8E-33 264.6 11.2 201 31-325 52-285 (285)
261 cd05576 STKc_RPK118_like Catal 100.0 1.5E-28 3.4E-33 257.4 10.5 188 35-325 42-237 (237)
262 cd05606 STKc_beta_ARK Catalyti 100.0 3.4E-28 7.5E-33 261.3 13.5 200 34-329 53-262 (278)
263 cd06639 STKc_myosinIIIB Cataly 100.0 5.3E-28 1.2E-32 261.7 14.6 199 36-326 77-291 (291)
264 KOG0973 Histone transcription 100.0 3.5E-26 7.6E-31 261.4 29.8 290 566-878 11-354 (942)
265 cd06638 STKc_myosinIIIA Cataly 100.0 6.2E-28 1.4E-32 260.4 14.9 198 36-325 73-286 (286)
266 cd06659 STKc_PAK6 Catalytic do 100.0 2.8E-28 6.1E-33 264.5 12.1 204 31-330 71-279 (297)
267 PF00069 Pkinase: Protein kina 100.0 1.1E-28 2.3E-33 262.2 8.4 201 31-325 51-260 (260)
268 cd07845 STKc_CDK10 Catalytic d 100.0 3.9E-28 8.5E-33 265.2 12.8 209 31-331 59-299 (309)
269 cd05611 STKc_Rim15_like Cataly 100.0 5.3E-28 1.1E-32 257.1 13.5 197 34-329 53-258 (260)
270 KOG0274 Cdc4 and related F-box 100.0 6.1E-26 1.3E-30 257.7 31.0 271 533-831 218-490 (537)
271 cd06615 PKc_MEK Catalytic doma 100.0 3.3E-28 7E-33 265.6 12.1 201 31-328 52-293 (308)
272 KOG4236 Serine/threonine prote 99.9 2.6E-29 5.6E-34 265.5 3.3 234 7-336 588-833 (888)
273 cd06613 STKc_MAP4K3_like Catal 99.9 4.7E-28 1E-32 257.6 13.0 201 31-324 53-262 (262)
274 cd05580 STKc_PKA Catalytic dom 99.9 7.4E-28 1.6E-32 260.5 14.7 200 31-329 54-261 (290)
275 PHA03210 serine/threonine kina 99.9 2.3E-28 5E-33 283.1 11.4 208 28-328 213-460 (501)
276 cd05052 PTKc_Abl Catalytic dom 99.9 5.5E-28 1.2E-32 257.5 13.3 197 32-321 56-257 (263)
277 cd05082 PTKc_Csk Catalytic dom 99.9 3.7E-28 8E-33 257.7 11.8 195 31-321 52-251 (256)
278 KOG0299 U3 snoRNP-associated p 99.9 2.8E-26 6.1E-31 238.9 25.4 290 566-876 140-453 (479)
279 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 9.4E-28 2E-32 259.1 15.2 206 31-331 52-271 (286)
280 cd06608 STKc_myosinIII_like Ca 99.9 4.4E-28 9.6E-33 259.6 12.5 199 36-325 61-275 (275)
281 cd06624 STKc_ASK Catalytic dom 99.9 4.4E-28 9.5E-33 259.0 12.2 202 31-325 58-268 (268)
282 cd07858 STKc_TEY_MAPK_plant Ca 99.9 2.4E-28 5.1E-33 270.2 10.4 213 28-333 54-302 (337)
283 cd06646 STKc_MAP4K5 Catalytic 99.9 2.9E-28 6.2E-33 260.3 10.6 201 30-324 58-267 (267)
284 cd05115 PTKc_Zap-70 Catalytic 99.9 5.1E-28 1.1E-32 256.8 12.4 199 31-321 48-250 (257)
285 cd06632 STKc_MEKK1_plant Catal 99.9 5.5E-28 1.2E-32 256.4 12.7 200 31-325 55-258 (258)
286 cd05084 PTKc_Fes Catalytic dom 99.9 9.6E-28 2.1E-32 253.8 14.4 199 31-321 46-248 (252)
287 KOG0300 WD40 repeat-containing 99.9 3.4E-26 7.3E-31 226.7 24.1 309 535-879 126-476 (481)
288 PLN03225 Serine/threonine-prot 99.9 1.3E-27 2.9E-32 278.1 16.8 190 52-330 206-458 (566)
289 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 5.1E-28 1.1E-32 260.9 12.4 205 30-322 58-279 (284)
290 KOG0305 Anaphase promoting com 99.9 4.5E-26 9.7E-31 249.0 27.5 266 537-825 191-463 (484)
291 cd05096 PTKc_DDR1 Catalytic do 99.9 4.2E-28 9.2E-33 264.2 11.5 200 31-321 72-300 (304)
292 cd07855 STKc_ERK5 Catalytic do 99.9 3.4E-28 7.4E-33 268.6 10.9 213 31-333 57-305 (334)
293 cd05058 PTKc_Met_Ron Catalytic 99.9 1.2E-27 2.6E-32 254.6 14.6 203 31-321 49-254 (262)
294 PTZ00421 coronin; Provisional 99.9 2.9E-25 6.2E-30 252.1 34.8 232 564-804 71-314 (493)
295 cd07850 STKc_JNK Catalytic dom 99.9 6.1E-28 1.3E-32 268.7 12.7 202 30-327 67-316 (353)
296 KOG0278 Serine/threonine kinas 99.9 1.9E-27 4E-32 228.9 14.1 248 609-878 6-296 (334)
297 cd06629 STKc_MAPKKK_Bck1_like 99.9 1.4E-27 3.1E-32 255.6 14.9 203 31-325 61-272 (272)
298 cd06607 STKc_TAO Catalytic dom 99.9 9.9E-28 2.1E-32 261.7 13.9 201 31-330 68-275 (307)
299 cd08220 STKc_Nek8 Catalytic do 99.9 1.1E-27 2.4E-32 253.8 13.9 200 31-325 52-256 (256)
300 cd06642 STKc_STK25-YSK1 Cataly 99.9 5.8E-28 1.2E-32 259.4 11.8 203 29-327 53-258 (277)
301 cd05114 PTKc_Tec_Rlk Catalytic 99.9 1.3E-27 2.8E-32 253.5 14.2 198 31-321 52-253 (256)
302 cd05116 PTKc_Syk Catalytic dom 99.9 7.8E-28 1.7E-32 255.4 12.3 198 31-321 49-250 (257)
303 cd05113 PTKc_Btk_Bmx Catalytic 99.9 8E-28 1.7E-32 255.2 12.4 198 32-322 53-254 (256)
304 KOG0289 mRNA splicing factor [ 99.9 1.1E-25 2.3E-30 232.4 27.4 282 568-878 219-505 (506)
305 cd05609 STKc_MAST Catalytic do 99.9 1.4E-27 3.1E-32 260.2 14.7 219 32-329 55-280 (305)
306 KOG2345 Serine/threonine prote 99.9 2.4E-28 5.2E-33 237.2 7.5 208 33-322 73-296 (302)
307 cd06633 STKc_TAO3 Catalytic do 99.9 2.3E-27 5.1E-32 259.4 16.4 201 31-329 74-280 (313)
308 PTZ00420 coronin; Provisional 99.9 4.8E-25 1E-29 251.2 35.6 250 585-861 49-319 (568)
309 cd07860 STKc_CDK2_3 Catalytic 99.9 1E-27 2.2E-32 258.4 13.2 202 30-325 51-284 (284)
310 cd05109 PTKc_HER2 Catalytic do 99.9 1.3E-27 2.7E-32 257.1 13.9 198 31-321 62-263 (279)
311 cd06630 STKc_MEKK1 Catalytic d 99.9 1.1E-27 2.4E-32 255.7 13.3 207 30-326 55-268 (268)
312 KOG2096 WD40 repeat protein [G 99.9 1.2E-25 2.5E-30 223.5 26.5 310 546-876 64-399 (420)
313 cd08218 STKc_Nek1 Catalytic do 99.9 8E-28 1.7E-32 255.0 12.0 201 31-325 52-256 (256)
314 cd06623 PKc_MAPKK_plant_like C 99.9 7.6E-28 1.6E-32 256.3 11.6 204 31-328 52-262 (264)
315 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 1.2E-27 2.5E-32 254.8 12.9 192 31-322 57-260 (262)
316 cd08216 PK_STRAD Pseudokinase 99.9 8.5E-28 1.8E-32 263.2 12.1 213 31-329 52-302 (314)
317 cd07865 STKc_CDK9 Catalytic do 99.9 1.2E-27 2.7E-32 261.2 13.4 207 31-325 64-310 (310)
318 cd07847 STKc_CDKL1_4 Catalytic 99.9 9.3E-28 2E-32 259.0 12.2 201 31-325 53-286 (286)
319 KOG0662 Cyclin-dependent kinas 99.9 3E-28 6.5E-33 224.5 7.0 204 31-328 54-289 (292)
320 cd06640 STKc_MST4 Catalytic do 99.9 7.6E-28 1.6E-32 258.5 11.3 202 31-328 55-259 (277)
321 cd05094 PTKc_TrkC Catalytic do 99.9 1.1E-27 2.3E-32 259.4 12.5 199 31-321 60-277 (291)
322 cd05059 PTKc_Tec_like Catalyti 99.9 1.3E-27 2.8E-32 253.6 12.9 199 31-322 52-254 (256)
323 cd00192 PTKc Catalytic domain 99.9 2.7E-27 5.8E-32 251.4 15.2 199 32-322 50-260 (262)
324 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 1.9E-27 4E-32 252.7 13.9 192 32-322 53-256 (258)
325 cd05093 PTKc_TrkB Catalytic do 99.9 1.1E-27 2.3E-32 258.9 12.3 199 31-321 60-274 (288)
326 cd06634 STKc_TAO2 Catalytic do 99.9 4.3E-27 9.2E-32 256.8 17.1 205 31-333 68-278 (308)
327 cd07843 STKc_CDC2L1 Catalytic 99.9 9.1E-28 2E-32 260.1 11.6 202 32-325 58-293 (293)
328 cd05091 PTKc_Ror2 Catalytic do 99.9 1.4E-27 2.9E-32 257.4 12.8 200 31-322 61-279 (283)
329 cd05105 PTKc_PDGFR_alpha Catal 99.9 9.5E-28 2.1E-32 269.7 12.0 156 78-321 233-392 (400)
330 cd05062 PTKc_IGF-1R Catalytic 99.9 9.6E-28 2.1E-32 257.7 11.5 200 31-322 62-274 (277)
331 KOG0695 Serine/threonine prote 99.9 9.7E-28 2.1E-32 240.8 10.6 207 34-336 307-530 (593)
332 cd05578 STKc_Yank1 Catalytic d 99.9 8.5E-28 1.9E-32 255.2 10.5 200 30-325 52-258 (258)
333 cd05061 PTKc_InsR Catalytic do 99.9 1.5E-27 3.2E-32 257.8 12.4 206 31-328 62-286 (288)
334 cd05049 PTKc_Trk Catalytic dom 99.9 2.6E-27 5.7E-32 254.7 14.3 198 32-321 62-276 (280)
335 cd05053 PTKc_FGFR Catalytic do 99.9 2.4E-27 5.1E-32 256.9 13.8 195 36-322 74-287 (293)
336 cd07849 STKc_ERK1_2_like Catal 99.9 1E-27 2.2E-32 265.1 11.0 212 29-331 54-301 (336)
337 cd06917 STKc_NAK1_like Catalyt 99.9 3.9E-27 8.4E-32 253.0 15.2 199 35-329 59-262 (277)
338 cd07837 STKc_CdkB_plant Cataly 99.9 2.9E-27 6.4E-32 256.4 14.4 199 36-326 59-295 (295)
339 cd05579 STKc_MAST_like Catalyt 99.9 1.9E-27 4.2E-32 253.1 12.7 212 31-328 46-263 (265)
340 KOG0278 Serine/threonine kinas 99.9 9.8E-27 2.1E-31 223.9 16.1 267 537-828 33-302 (334)
341 cd06626 STKc_MEKK4 Catalytic d 99.9 2.8E-27 6.1E-32 251.9 13.8 205 31-325 52-264 (264)
342 cd06653 STKc_MEKK3_like_1 Cata 99.9 2.2E-27 4.7E-32 253.1 12.9 207 29-325 55-264 (264)
343 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 2.9E-27 6.2E-32 253.5 13.8 191 32-322 70-272 (274)
344 cd05036 PTKc_ALK_LTK Catalytic 99.9 2.2E-27 4.9E-32 254.9 12.9 200 31-322 62-274 (277)
345 cd07842 STKc_CDK8_like Catalyt 99.9 1.4E-27 3E-32 261.6 11.4 207 30-325 54-316 (316)
346 cd05090 PTKc_Ror1 Catalytic do 99.9 1.9E-27 4.2E-32 256.2 12.3 200 31-322 60-279 (283)
347 cd05577 STKc_GRK Catalytic dom 99.9 1.9E-27 4E-32 255.5 12.1 204 31-329 46-261 (277)
348 KOG0608 Warts/lats-like serine 99.9 6.9E-28 1.5E-32 259.7 8.6 254 22-330 675-936 (1034)
349 PTZ00420 coronin; Provisional 99.9 7.3E-25 1.6E-29 249.6 33.9 254 539-805 50-318 (568)
350 cd07844 STKc_PCTAIRE_like Cata 99.9 1.4E-27 3.1E-32 258.3 11.1 201 31-325 56-291 (291)
351 cd05040 PTKc_Ack_like Catalyti 99.9 3.2E-27 6.9E-32 250.6 13.5 203 28-321 46-253 (257)
352 cd06635 STKc_TAO1 Catalytic do 99.9 4.8E-27 1E-31 257.4 15.2 200 31-328 78-283 (317)
353 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 2E-27 4.3E-32 252.4 11.8 190 31-321 54-256 (259)
354 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 2.1E-27 4.6E-32 255.9 12.0 201 31-321 59-276 (283)
355 cd05075 PTKc_Axl Catalytic dom 99.9 2.8E-27 6.1E-32 253.3 12.9 202 31-322 53-267 (272)
356 cd05089 PTKc_Tie1 Catalytic do 99.9 4.4E-27 9.5E-32 255.3 14.6 192 36-322 61-271 (297)
357 cd08226 PK_STRAD_beta Pseudoki 99.9 1.9E-27 4.1E-32 262.0 11.7 211 31-327 52-313 (328)
358 KOG1095 Protein tyrosine kinas 99.9 1.1E-27 2.3E-32 280.9 10.3 203 27-321 744-956 (1025)
359 cd06617 PKc_MKK3_6 Catalytic d 99.9 3.7E-27 8E-32 253.9 13.7 202 33-329 55-268 (283)
360 cd05035 PTKc_Axl_like Catalyti 99.9 3.7E-27 8E-32 252.4 13.6 202 31-322 54-268 (273)
361 cd05072 PTKc_Lyn Catalytic dom 99.9 3.7E-27 8E-32 250.7 13.5 198 31-321 54-256 (261)
362 cd06647 STKc_PAK_I Catalytic d 99.9 2E-27 4.4E-32 257.3 11.6 204 32-330 70-277 (293)
363 cd05033 PTKc_EphR Catalytic do 99.9 5.5E-27 1.2E-31 250.2 14.8 200 31-322 58-261 (266)
364 cd07870 STKc_PFTAIRE2 Catalyti 99.9 2.8E-27 6E-32 256.1 12.6 201 31-325 56-291 (291)
365 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 3E-27 6.5E-32 251.3 12.5 197 31-321 54-255 (260)
366 cd05068 PTKc_Frk_like Catalyti 99.9 3.6E-27 7.9E-32 250.8 13.1 198 31-321 54-256 (261)
367 cd07852 STKc_MAPK15 Catalytic 99.9 2.3E-27 5.1E-32 262.3 12.0 212 31-331 59-304 (337)
368 cd05071 PTKc_Src Catalytic dom 99.9 4.2E-27 9E-32 250.6 13.3 197 31-321 54-255 (262)
369 cd06614 STKc_PAK Catalytic dom 99.9 2E-27 4.4E-32 256.4 11.1 204 31-328 68-276 (286)
370 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 2.2E-27 4.7E-32 256.0 11.2 201 31-327 56-271 (284)
371 cd05088 PTKc_Tie2 Catalytic do 99.9 4E-27 8.6E-32 256.4 13.3 192 36-322 66-276 (303)
372 cd05055 PTKc_PDGFR Catalytic d 99.9 5E-27 1.1E-31 255.4 14.0 195 36-321 97-296 (302)
373 cd05101 PTKc_FGFR2 Catalytic d 99.9 5.7E-27 1.2E-31 255.3 14.5 195 36-322 79-292 (304)
374 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 3.1E-27 6.7E-32 254.7 12.2 203 31-321 58-278 (284)
375 cd05032 PTKc_InsR_like Catalyt 99.9 3.7E-27 8.1E-32 253.1 12.7 199 31-321 62-273 (277)
376 cd05083 PTKc_Chk Catalytic dom 99.9 4E-27 8.7E-32 249.5 12.7 193 31-321 52-249 (254)
377 cd05098 PTKc_FGFR1 Catalytic d 99.9 4.2E-27 9.1E-32 256.8 13.2 194 36-321 82-294 (307)
378 cd07880 STKc_p38gamma_MAPK12 C 99.9 2.2E-27 4.8E-32 262.9 11.1 205 30-331 66-307 (343)
379 cd06610 STKc_OSR1_SPAK Catalyt 99.9 2.4E-27 5.2E-32 252.9 10.8 205 32-325 53-267 (267)
380 cd08225 STKc_Nek5 Catalytic do 99.9 3.8E-27 8.3E-32 249.8 12.4 201 31-325 52-257 (257)
381 cd05085 PTKc_Fer Catalytic dom 99.9 7.3E-27 1.6E-31 246.7 14.2 198 31-321 45-246 (250)
382 cd05122 PKc_STE Catalytic doma 99.9 3.7E-27 7.9E-32 248.7 11.9 198 32-324 51-253 (253)
383 cd05103 PTKc_VEGFR2 Catalytic 99.9 6.8E-27 1.5E-31 259.1 14.5 197 36-322 69-335 (343)
384 KOG0305 Anaphase promoting com 99.9 3.2E-25 6.9E-30 242.4 27.1 270 574-879 183-461 (484)
385 cd07857 STKc_MPK1 Catalytic do 99.9 5.3E-27 1.1E-31 258.9 13.4 209 36-333 60-303 (332)
386 cd05056 PTKc_FAK Catalytic dom 99.9 7.1E-27 1.5E-31 249.9 14.0 197 31-321 60-260 (270)
387 KOG1036 Mitotic spindle checkp 99.9 9.5E-25 2.1E-29 217.4 27.8 272 567-869 12-294 (323)
388 cd05060 PTKc_Syk_like Catalyti 99.9 7.6E-27 1.7E-31 247.8 14.0 198 31-321 49-250 (257)
389 cd06657 STKc_PAK4 Catalytic do 99.9 3.7E-27 8E-32 255.1 11.8 207 29-331 68-279 (292)
390 KOG0194 Protein tyrosine kinas 99.9 1.6E-27 3.4E-32 262.0 8.8 198 31-321 214-415 (474)
391 cd07836 STKc_Pho85 Catalytic d 99.9 4.1E-27 8.9E-32 253.7 11.8 201 31-325 51-284 (284)
392 cd07854 STKc_MAPK4_6 Catalytic 99.9 2.1E-27 4.5E-32 263.1 9.8 211 32-333 56-311 (342)
393 cd06606 STKc_MAPKKK Catalytic 99.9 6.9E-27 1.5E-31 247.7 13.4 205 31-325 52-260 (260)
394 cd08219 STKc_Nek3 Catalytic do 99.9 4.7E-27 1E-31 249.0 12.0 197 32-322 52-252 (255)
395 cd07834 STKc_MAPK Catalytic do 99.9 3E-27 6.5E-32 260.7 10.8 210 31-331 52-298 (330)
396 cd07851 STKc_p38 Catalytic dom 99.9 3.3E-27 7.2E-32 261.6 11.1 204 32-332 68-308 (343)
397 cd07846 STKc_CDKL2_3 Catalytic 99.9 3.1E-27 6.8E-32 254.9 10.6 200 31-325 53-286 (286)
398 cd05069 PTKc_Yes Catalytic dom 99.9 8.9E-27 1.9E-31 247.7 13.9 197 31-321 54-255 (260)
399 cd05099 PTKc_FGFR4 Catalytic d 99.9 9.3E-27 2E-31 254.9 14.4 194 36-321 76-288 (314)
400 KOG0772 Uncharacterized conser 99.9 9.7E-26 2.1E-30 236.8 21.0 280 532-823 178-487 (641)
401 cd05092 PTKc_TrkA Catalytic do 99.9 7.4E-27 1.6E-31 251.3 13.0 198 32-321 61-276 (280)
402 cd08228 STKc_Nek6 Catalytic do 99.9 4.7E-27 1E-31 250.8 11.2 200 29-321 53-260 (267)
403 cd05066 PTKc_EphR_A Catalytic 99.9 6.3E-27 1.4E-31 249.9 12.2 200 31-321 58-261 (267)
404 cd05047 PTKc_Tie Catalytic dom 99.9 9.7E-27 2.1E-31 248.9 13.6 191 36-321 54-263 (270)
405 cd08215 STKc_Nek Catalytic dom 99.9 9.3E-27 2E-31 246.7 13.2 200 32-325 53-258 (258)
406 cd07866 STKc_BUR1 Catalytic do 99.9 1.2E-26 2.5E-31 253.7 14.4 214 31-325 60-311 (311)
407 cd06641 STKc_MST3 Catalytic do 99.9 8.5E-27 1.8E-31 250.4 13.0 202 31-328 55-259 (277)
408 cd05051 PTKc_DDR Catalytic dom 99.9 6.2E-27 1.3E-31 254.0 12.0 198 32-321 73-292 (296)
409 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.6E-26 3.4E-31 245.9 14.8 196 32-321 56-256 (261)
410 cd07879 STKc_p38delta_MAPK13 C 99.9 5.8E-27 1.2E-31 259.6 11.9 205 29-331 65-306 (342)
411 cd06616 PKc_MKK4 Catalytic dom 99.9 1.1E-26 2.4E-31 251.0 13.6 202 32-328 56-273 (288)
412 cd07835 STKc_CDK1_like Catalyt 99.9 7.6E-27 1.6E-31 251.5 12.3 201 31-325 51-283 (283)
413 cd05039 PTKc_Csk_like Catalyti 99.9 8.1E-27 1.7E-31 247.4 12.2 194 31-321 53-251 (256)
414 cd05110 PTKc_HER4 Catalytic do 99.9 7.2E-27 1.6E-31 254.4 11.8 198 31-321 62-263 (303)
415 cd05041 PTKc_Fes_like Catalyti 99.9 1.3E-26 2.8E-31 244.9 13.5 198 32-321 46-247 (251)
416 KOG1026 Nerve growth factor re 99.9 2.9E-27 6.2E-32 267.6 8.8 206 21-320 534-756 (774)
417 cd07833 STKc_CDKL Catalytic do 99.9 1.5E-26 3.4E-31 249.7 14.2 201 32-325 54-288 (288)
418 cd05086 PTKc_Aatyk2 Catalytic 99.9 2E-26 4.2E-31 246.3 14.8 198 32-321 49-264 (268)
419 cd05118 STKc_CMGC Catalytic do 99.9 6.6E-27 1.4E-31 251.8 11.2 201 31-325 51-283 (283)
420 PF07714 Pkinase_Tyr: Protein 99.9 2.1E-27 4.5E-32 252.4 7.1 199 31-321 54-257 (259)
421 cd07838 STKc_CDK4_6_like Catal 99.9 1.4E-26 3E-31 249.9 13.6 200 33-325 56-287 (287)
422 cd05063 PTKc_EphR_A2 Catalytic 99.9 1.5E-26 3.4E-31 247.0 13.8 200 31-321 59-262 (268)
423 KOG1027 Serine/threonine prote 99.9 1E-27 2.2E-32 268.0 4.7 200 34-327 559-772 (903)
424 cd06618 PKc_MKK7 Catalytic dom 99.9 1.7E-26 3.7E-31 250.6 14.2 200 35-329 71-280 (296)
425 cd05100 PTKc_FGFR3 Catalytic d 99.9 1.6E-26 3.4E-31 255.3 14.2 195 36-322 76-289 (334)
426 cd05112 PTKc_Itk Catalytic dom 99.9 1.3E-26 2.7E-31 245.9 12.8 198 32-322 53-254 (256)
427 KOG0294 WD40 repeat-containing 99.9 9E-25 2E-29 217.5 25.0 242 564-825 39-283 (362)
428 KOG0669 Cyclin T-dependent kin 99.9 4.8E-27 1E-31 227.9 8.6 192 54-332 97-325 (376)
429 cd08222 STKc_Nek11 Catalytic d 99.9 8.1E-27 1.8E-31 248.0 11.3 200 31-325 55-260 (260)
430 cd06627 STKc_Cdc7_like Catalyt 99.9 1.5E-26 3.2E-31 244.7 13.2 199 32-325 53-254 (254)
431 cd05065 PTKc_EphR_B Catalytic 99.9 1.9E-26 4.2E-31 246.4 14.2 201 32-321 59-263 (269)
432 cd05097 PTKc_DDR_like Catalyti 99.9 1.2E-26 2.6E-31 251.6 12.7 200 31-321 70-291 (295)
433 cd07830 STKc_MAK_like Catalyti 99.9 1.2E-26 2.7E-31 249.9 12.4 200 31-325 50-283 (283)
434 cd05067 PTKc_Lck_Blk Catalytic 99.9 1.4E-26 3.1E-31 246.1 12.8 197 31-321 54-255 (260)
435 cd05045 PTKc_RET Catalytic dom 99.9 1.8E-26 4E-31 249.5 13.7 199 31-321 56-281 (290)
436 cd07877 STKc_p38alpha_MAPK14 C 99.9 1.2E-26 2.5E-31 257.4 12.1 206 31-333 69-311 (345)
437 cd05107 PTKc_PDGFR_beta Cataly 99.9 1.2E-26 2.6E-31 260.7 12.2 157 78-322 235-395 (401)
438 cd05050 PTKc_Musk Catalytic do 99.9 1.2E-26 2.6E-31 250.8 11.8 200 30-321 60-284 (288)
439 KOG0641 WD40 repeat protein [G 99.9 1E-23 2.3E-28 199.9 30.1 293 566-878 30-348 (350)
440 cd05042 PTKc_Aatyk Catalytic d 99.9 1.3E-26 2.8E-31 247.8 11.9 199 31-321 48-265 (269)
441 KOG0306 WD40-repeat-containing 99.9 1.8E-24 3.9E-29 236.6 28.3 264 537-824 388-665 (888)
442 smart00219 TyrKc Tyrosine kina 99.9 1.7E-26 3.6E-31 245.0 12.2 195 34-321 57-256 (258)
443 cd07840 STKc_CDK9_like Catalyt 99.9 2.3E-26 4.9E-31 248.1 13.5 203 32-325 52-287 (287)
444 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 2.5E-26 5.4E-31 245.1 13.6 198 31-321 55-260 (267)
445 cd05057 PTKc_EGFR_like Catalyt 99.9 2E-26 4.3E-31 247.8 12.7 201 28-321 59-263 (279)
446 cd05073 PTKc_Hck Catalytic dom 99.9 2.7E-26 5.9E-31 244.0 13.5 197 31-321 54-255 (260)
447 cd07864 STKc_CDK12 Catalytic d 99.9 2E-26 4.3E-31 250.8 12.6 204 31-325 59-302 (302)
448 cd08530 STKc_CNK2-like Catalyt 99.9 2.8E-26 6.1E-31 242.9 13.3 199 31-325 52-256 (256)
449 cd08229 STKc_Nek7 Catalytic do 99.9 3.3E-26 7.2E-31 244.3 13.9 198 31-321 55-260 (267)
450 cd05046 PTK_CCK4 Pseudokinase 99.9 2.5E-26 5.3E-31 246.4 12.9 199 31-322 61-272 (275)
451 KOG0614 cGMP-dependent protein 99.9 5.3E-27 1.1E-31 247.7 7.4 186 53-330 492-685 (732)
452 cd05044 PTKc_c-ros Catalytic d 99.9 3.6E-26 7.9E-31 244.2 14.1 199 31-321 52-265 (269)
453 cd05613 STKc_MSK1_N N-terminal 99.9 3.4E-26 7.4E-31 247.4 13.9 200 36-329 63-275 (290)
454 PRK13184 pknD serine/threonine 99.9 1.2E-26 2.7E-31 274.3 11.2 218 29-321 53-284 (932)
455 KOG0270 WD40 repeat-containing 99.9 4.5E-25 9.8E-30 229.0 21.2 255 571-829 176-455 (463)
456 cd05095 PTKc_DDR2 Catalytic do 99.9 2.8E-26 6E-31 248.9 12.8 200 31-321 72-292 (296)
457 cd05610 STKc_MASTL Catalytic d 99.9 3.3E-26 7.2E-31 273.3 14.4 97 32-132 58-154 (669)
458 PLN00009 cyclin-dependent kina 99.9 3.1E-26 6.8E-31 248.2 12.9 205 31-329 54-291 (294)
459 cd05034 PTKc_Src_like Catalyti 99.9 4.1E-26 8.9E-31 242.7 13.5 198 31-321 54-256 (261)
460 KOG0641 WD40 repeat protein [G 99.9 2.4E-23 5.1E-28 197.5 30.4 251 564-823 85-349 (350)
461 cd05043 PTK_Ryk Pseudokinase d 99.9 2.7E-26 5.9E-31 246.8 12.1 200 31-321 61-271 (280)
462 KOG0300 WD40 repeat-containing 99.9 1E-24 2.3E-29 216.1 22.1 279 536-826 163-479 (481)
463 cd07829 STKc_CDK_like Catalyti 99.9 3.8E-26 8.2E-31 245.8 12.7 200 32-325 52-282 (282)
464 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 2.8E-26 6E-31 247.1 11.6 203 31-321 59-278 (284)
465 KOG1407 WD40 repeat protein [F 99.9 1.6E-24 3.5E-29 210.4 22.5 237 615-875 18-257 (313)
466 PTZ00024 cyclin-dependent prot 99.9 3E-26 6.4E-31 253.3 11.8 219 31-331 73-322 (335)
467 cd05123 STKc_AGC Catalytic dom 99.9 5.3E-26 1.1E-30 240.0 13.1 198 32-325 47-250 (250)
468 cd05581 STKc_PDK1 Catalytic do 99.9 3.8E-26 8.2E-31 245.4 11.9 213 37-325 61-280 (280)
469 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 5.1E-26 1.1E-30 243.2 12.8 200 30-321 47-265 (269)
470 KOG0647 mRNA export protein (c 99.9 3.5E-24 7.6E-29 212.2 24.5 249 616-877 26-279 (347)
471 cd05583 STKc_MSK_N N-terminal 99.9 7.8E-26 1.7E-30 244.4 13.5 201 36-330 63-274 (288)
472 KOG2055 WD40 repeat protein [G 99.9 8.3E-24 1.8E-28 220.2 27.4 292 567-878 212-511 (514)
473 KOG0639 Transducin-like enhanc 99.9 6.9E-25 1.5E-29 229.3 18.9 263 542-822 439-703 (705)
474 KOG0643 Translation initiation 99.9 9.6E-24 2.1E-28 205.6 25.4 239 609-870 2-252 (327)
475 KOG1539 WD repeat protein [Gen 99.9 4.6E-23 9.9E-28 228.4 34.0 310 537-877 176-646 (910)
476 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 7.7E-26 1.7E-30 248.9 11.3 206 31-334 62-300 (328)
477 KOG4283 Transcription-coupled 99.9 1.4E-23 2.9E-28 206.8 25.7 295 566-878 41-364 (397)
478 KOG0308 Conserved WD40 repeat- 99.9 9.8E-25 2.1E-29 235.5 19.3 287 566-877 19-325 (735)
479 cd08528 STKc_Nek10 Catalytic d 99.9 1.8E-25 3.8E-30 239.0 13.6 194 34-322 65-266 (269)
480 KOG4257 Focal adhesion tyrosin 99.9 6.9E-26 1.5E-30 244.2 10.3 221 7-321 415-644 (974)
481 KOG1408 WD40 repeat protein [F 99.9 1.6E-23 3.4E-28 227.1 28.2 320 534-878 271-712 (1080)
482 PHA02882 putative serine/threo 99.9 1E-25 2.2E-30 244.1 11.6 199 35-321 80-291 (294)
483 KOG0973 Histone transcription 99.9 6.2E-24 1.3E-28 243.1 26.4 279 536-824 28-356 (942)
484 KOG1006 Mitogen-activated prot 99.9 1.8E-27 3.8E-32 232.9 -2.3 211 22-328 108-333 (361)
485 KOG0668 Casein kinase II, alph 99.9 4.1E-26 8.8E-31 218.5 7.0 197 36-328 91-328 (338)
486 KOG1332 Vesicle coat complex C 99.9 2.7E-24 5.8E-29 207.0 19.0 247 615-877 9-284 (299)
487 smart00750 KIND kinase non-cat 99.9 9.4E-26 2E-30 224.7 9.4 158 66-326 1-169 (176)
488 KOG0587 Traf2- and Nck-interac 99.9 9.3E-26 2E-30 253.7 9.9 206 32-328 70-288 (953)
489 KOG1151 Tousled-like protein k 99.9 1.7E-25 3.6E-30 232.3 10.7 206 34-327 523-746 (775)
490 KOG0288 WD40 repeat protein Ti 99.9 2.2E-24 4.8E-29 221.7 18.1 264 534-820 188-458 (459)
491 cd05074 PTKc_Tyro3 Catalytic d 99.9 3.2E-25 6.9E-30 237.5 12.6 202 31-322 54-268 (273)
492 KOG0289 mRNA splicing factor [ 99.9 2.1E-23 4.6E-28 215.5 25.4 269 534-822 232-505 (506)
493 smart00220 S_TKc Serine/Threon 99.9 2.4E-25 5.3E-30 233.1 10.8 221 8-325 14-244 (244)
494 KOG4250 TANK binding protein k 99.9 1.1E-25 2.3E-30 248.8 8.2 177 7-275 37-230 (732)
495 KOG0321 WD40 repeat-containing 99.9 1.3E-23 2.8E-28 226.5 23.5 287 572-878 53-390 (720)
496 KOG0308 Conserved WD40 repeat- 99.9 1E-23 2.2E-28 227.7 22.7 339 526-879 30-393 (735)
497 KOG1332 Vesicle coat complex C 99.9 3.9E-24 8.4E-29 205.9 17.3 252 566-824 9-287 (299)
498 KOG0283 WD40 repeat-containing 99.9 1.9E-23 4.2E-28 233.6 24.5 245 615-878 265-575 (712)
499 KOG0664 Nemo-like MAPK-related 99.9 3.6E-26 7.9E-31 223.8 2.3 182 55-327 131-348 (449)
500 KOG0294 WD40 repeat-containing 99.9 1.6E-22 3.4E-27 201.6 27.0 266 583-878 4-280 (362)
No 1
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=1.1e-90 Score=847.67 Aligned_cols=735 Identities=72% Similarity=1.145 Sum_probs=572.3
Q ss_pred CceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCC
Q 002801 55 DPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 134 (879)
Q Consensus 55 ~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~ 134 (879)
..++.|.++.+++|++||+...+.+++.+++.|++||++||+|||++|||||||||+||||+..|.+|++|||++...+.
T Consensus 53 ~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 53 DSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred chhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 34444444558899999977667799999999999999999999999999999999999999999999999999976432
Q ss_pred CCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccc
Q 002801 135 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 214 (879)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 214 (879)
+. ....+..|||+++.... ..... .
T Consensus 133 ~~--------------------------~~~~ki~DfG~a~~~~~-~~~~~----------------------------~ 157 (793)
T PLN00181 133 DE--------------------------DATTKSREIGSSRREEI-LSERR----------------------------I 157 (793)
T ss_pred cc--------------------------cCccccccccccccccc-ccccc----------------------------h
Confidence 20 11244556665544100 00000 0
Q ss_pred hhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhcCCCCChhhHhHHhhhcccCCCchhhcc
Q 002801 215 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLK 294 (879)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (879)
.........+++......+||++|||||++.+..|+.++|||||||+||||++|+.+.......+..+.....++.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (793)
T PLN00181 158 EKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLN 237 (793)
T ss_pred hhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhc
Confidence 00001112233444456789999999999999999999999999999999999665554444455555555556555555
Q ss_pred ChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 002801 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVS 374 (879)
Q Consensus 295 ~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~e~~~~~~~~~~~~~~e~l~~~l~~~~q~kqe~~~~l~~~l~ 374 (879)
.+....++.+||+++|.+||++.|+++||||........+++......+...+.+.+.+++...++++++++.+++.+++
T Consensus 238 ~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 317 (793)
T PLN00181 238 WPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTIS 317 (793)
T ss_pred CHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788999999999999999999999999998866555555555555666666677788888888889999999999999
Q ss_pred hhcccHHHHHHHHHHHHhcCCCCcccccccccCCCCCCCCcccccCCCCccccccccccCcccccccccccccccccccC
Q 002801 375 FICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKH 454 (879)
Q Consensus 375 ~l~~Di~eVe~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (879)
.++.||++|++++.+....... .......+++++.+..+...+.... ....
T Consensus 318 ~l~~~i~~~~~r~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 368 (793)
T PLN00181 318 LLSSDIDQVVKRQLVLQQKGSD-------------------------VRSFLASRKRIRQGAETLAAEEEND----DNSS 368 (793)
T ss_pred HHHHHHHHHHhhhhhhcccccc-------------------------cccccccchhhhccccchhhccccc----cccc
Confidence 9999999999866543222111 0122223444443333222221100 0000
Q ss_pred cCCCCcccchhhhhHHHHhHhHHHHHHHhhccccCC---CCCCCcccccccC-CCCCCCCCccccccccccCCCccc-cc
Q 002801 455 NLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVK---PSGRPLVRHSQLS-SDGRTSKPLVNERSSINNLGSKEG-YS 529 (879)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~ 529 (879)
.....+.+.+++++|||++|++|+++||.+|++... ...+++.|..+.- .+++.. +..+.+++..... |.
T Consensus 369 ~~~~~~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 443 (793)
T PLN00181 369 KLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSENGRSS-----EKSSMSNPAKPPDFYI 443 (793)
T ss_pred cccccccccchhhhHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccccc-----cccccccccccccccc
Confidence 012235677888999999999999999999986532 2344555544322 344432 3344444443332 32
Q ss_pred cC-CCCceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccc
Q 002801 530 EG-RRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIH 608 (879)
Q Consensus 530 ~~-~~~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~ 608 (879)
.. ...+++.+|.+|++++|++.+.++...++.+++.+|.+.|++++|+|+|++|||||.|++|+||++..........+
T Consensus 444 ~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~ 523 (793)
T PLN00181 444 NDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIH 523 (793)
T ss_pred cccccccchhhhhhhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccc
Confidence 22 23455778999999999999999999999899999999999999999999999999999999999876433344455
Q ss_pred cceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEE
Q 002801 609 YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (879)
Q Consensus 609 ~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iw 688 (879)
.++..+.+...|.+++|++..+.+|++++.||+|++||+.+++.+..+.+|.+.|++++|+|.++.+|++|+.|++|++|
T Consensus 524 ~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iW 603 (793)
T PLN00181 524 YPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLW 603 (793)
T ss_pred cceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEE
Confidence 66777777889999999988789999999999999999999999999999999999999997678999999999999999
Q ss_pred eCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCc
Q 002801 689 SINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNT 768 (879)
Q Consensus 689 d~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~ 768 (879)
|++++..+.++..+..|+++.|++.++.+|++|+.|+.|++||+++.+.++..+.+|...|+++.|.++.+|+|++.|++
T Consensus 604 d~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ 683 (793)
T PLN00181 604 SINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNT 683 (793)
T ss_pred ECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCE
Confidence 99999999999888899999998766899999999999999999987766788889999999999998999999999999
Q ss_pred EEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCC
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAA 848 (879)
Q Consensus 769 i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 848 (879)
|++||++.........++.++.+|.+.+++++|+|++.+||+|+.|+.|++|+...+.++.++.+...+.+.+....+|.
T Consensus 684 ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 763 (793)
T PLN00181 684 LKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDAS 763 (793)
T ss_pred EEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCC
Confidence 99999986432222367889999999999999999999999999999999999998888888888777666665556778
Q ss_pred CCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 849 QFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 849 ~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
.+|++++|+|++. +|++|+.||.|+||+||
T Consensus 764 ~~V~~v~ws~~~~-~lva~~~dG~I~i~~~~ 793 (793)
T PLN00181 764 QFISSVCWRGQSS-TLVAANSTGNIKILEMV 793 (793)
T ss_pred cEEEEEEEcCCCC-eEEEecCCCcEEEEecC
Confidence 8999999999999 99999999999999997
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.3e-46 Score=376.24 Aligned_cols=311 Identities=21% Similarity=0.327 Sum_probs=276.2
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
..+++|+.|.++++||..+..+..+. .+|.+.|.||+|+|||+.||+|+.||.|++||-.++.......
T Consensus 128 ~~l~tGsGD~TvR~WD~~TeTp~~t~-----KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l------ 196 (480)
T KOG0271|consen 128 SRLVTGSGDTTVRLWDLDTETPLFTC-----KGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRAL------ 196 (480)
T ss_pred ceEEecCCCceEEeeccCCCCcceee-----cCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccc------
Confidence 34489999999999999987766554 4999999999999999999999999999999987754443322
Q ss_pred eccCCCeeEEEEeCC----CCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEe
Q 002801 614 MASRSKLSSICWNSY----IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~----~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd 689 (879)
.+|...|++++|.|. ....||+++.||.|+|||+..++++..+.+|+.+|+||+|-- ..++++||.|++|++|+
T Consensus 197 ~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG--~gliySgS~DrtIkvw~ 274 (480)
T KOG0271|consen 197 RGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGG--EGLIYSGSQDRTIKVWR 274 (480)
T ss_pred cCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcC--CceEEecCCCceEEEEE
Confidence 358999999999773 356899999999999999999999999999999999999973 56999999999999999
Q ss_pred CCCCceEEEEecCC-ceEEEEee-----------CC------------------------CCCEEEEEeCCCeEEEEEcC
Q 002801 690 INQGVSIGTIKTKA-NVCCVQFP-----------LD------------------------SGRSLAFGSADHRIYYYDLR 733 (879)
Q Consensus 690 ~~~~~~i~~~~~~~-~v~~v~~~-----------p~------------------------~~~~l~tgs~d~~I~iwDl~ 733 (879)
...|..+..++.|+ .|+.++.+ |. ++..+++|+.|.++.+|+..
T Consensus 275 a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~ 354 (480)
T KOG0271|consen 275 ALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPF 354 (480)
T ss_pred ccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccc
Confidence 99999999888654 48888766 32 22359999999999999999
Q ss_pred CCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEe
Q 002801 734 NSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGS 812 (879)
Q Consensus 734 ~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs 812 (879)
..++|+..+.+|..-|+.+.|+ |+.++||+|-|+.|++||.+++ +-+.+|.||...|+.|+|+.|.+.|++||
T Consensus 355 ~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tG------k~lasfRGHv~~VYqvawsaDsRLlVS~S 428 (480)
T KOG0271|consen 355 KSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTG------KFLASFRGHVAAVYQVAWSADSRLLVSGS 428 (480)
T ss_pred ccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCc------chhhhhhhccceeEEEEeccCccEEEEcC
Confidence 8888899999999999999999 9999999999999999999998 77899999999999999999999999999
Q ss_pred CCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 813 ETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 813 ~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
.|.++++|++++.+.... +.+|...|.+|.|+|||. .+++++.|..+++|.
T Consensus 429 kDsTLKvw~V~tkKl~~D-------------LpGh~DEVf~vDwspDG~-rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 429 KDSTLKVWDVRTKKLKQD-------------LPGHADEVFAVDWSPDGQ-RVASGGKDKVLRLWR 479 (480)
T ss_pred CCceEEEEEeeeeeeccc-------------CCCCCceEEEEEecCCCc-eeecCCCceEEEeec
Confidence 999999999998765432 357888999999999999 999999999999995
No 3
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.4e-42 Score=350.83 Aligned_cols=308 Identities=23% Similarity=0.376 Sum_probs=264.7
Q ss_pred ccCceEEEeecC-cEEEEEec-cccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCC
Q 002801 541 LEGLCKYLSFSK-LRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 618 (879)
Q Consensus 541 ~d~~i~~w~~~~-~~~~~~l~-~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 618 (879)
.+.+..++..+. +++.+-.+ ...+.||..+|.|+.|+|+|..||||+.|.++++||+.+..+ .....+|..
T Consensus 86 e~~l~lvyqpqavfrvrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp-------~~t~KgH~~ 158 (480)
T KOG0271|consen 86 EDVLTLVYQPQAVFRVRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETP-------LFTCKGHKN 158 (480)
T ss_pred hheeeEEeccchhhcccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCc-------ceeecCCcc
Confidence 344555554333 44433332 356779999999999999999999999999999999987322 123346889
Q ss_pred CeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEE-EEeccCCCcEEEEEEecC----CCCEEEEEeCCCcEEEEeCCCC
Q 002801 619 KLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVL-TEMREHERRVWSIDFSSA----DPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 619 ~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~-~~~~~h~~~v~sv~~sp~----~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
.|.|++|+| ++..||+|+.||+|++||..+++++ ..+.+|.+.|++++|.|. ...+||++|.||+|+|||+..+
T Consensus 159 WVlcvawsP-Dgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~ 237 (480)
T KOG0271|consen 159 WVLCVAWSP-DGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLG 237 (480)
T ss_pred EEEEEEECC-CcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCc
Confidence 999999999 4999999999999999999988764 668999999999999863 4569999999999999999999
Q ss_pred ceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-C-----------C---
Q 002801 694 VSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-D-----------A--- 757 (879)
Q Consensus 694 ~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~-----------~--- 757 (879)
.++..+.. ...|+||+|--+ .+|++||.|++|++|+...+.. ...++||...|+.++.+ + +
T Consensus 238 ~~~~~lsgHT~~VTCvrwGG~--gliySgS~DrtIkvw~a~dG~~-~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~ 314 (480)
T KOG0271|consen 238 TCVRTLSGHTASVTCVRWGGE--GLIYSGSQDRTIKVWRALDGKL-CRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKP 314 (480)
T ss_pred eEEEEeccCccceEEEEEcCC--ceEEecCCCceEEEEEccchhH-HHhhcccchheeeeeccchhhhhccccccccccC
Confidence 99988875 567999999754 6999999999999999998874 78899999999988775 1 2
Q ss_pred ----------------------CEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCC
Q 002801 758 ----------------------TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETN 815 (879)
Q Consensus 758 ----------------------~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg 815 (879)
+.|+|||.|.++.+|+-... .+++..+.||...|+.|.||||++|||++|-|.
T Consensus 315 ~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~-----kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDk 389 (480)
T KOG0271|consen 315 KSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKS-----KKPITRMTGHQALVNHVSFSPDGRYIASASFDK 389 (480)
T ss_pred CChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccccc-----ccchhhhhchhhheeeEEECCCccEEEEeeccc
Confidence 24999999999999997765 368899999999999999999999999999999
Q ss_pred cEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 816 EVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 816 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
+|++|+-.+++-+.+++ +|-+.|..|+|+.|++ +|++|+.|.++|||++
T Consensus 390 SVkLW~g~tGk~lasfR-------------GHv~~VYqvawsaDsR-LlVS~SkDsTLKvw~V 438 (480)
T KOG0271|consen 390 SVKLWDGRTGKFLASFR-------------GHVAAVYQVAWSADSR-LLVSGSKDSTLKVWDV 438 (480)
T ss_pred ceeeeeCCCcchhhhhh-------------hccceeEEEEeccCcc-EEEEcCCCceEEEEEe
Confidence 99999999998887764 7889999999999999 9999999999999986
No 4
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.6e-42 Score=355.47 Aligned_cols=282 Identities=23% Similarity=0.339 Sum_probs=259.3
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCC-CCCeEEEeeCCCcEEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQIASSNFEGVVQV 644 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~l~s~~~dg~V~v 644 (879)
+-..+|..+.|++|+..||||+.+|.++||+.... + ......+|.+.|.++.|+|. +...+|||+.||+|++
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~-~------~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvkl 245 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQC-N------LLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKL 245 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCc-c------eeEEEeccccceeeEEEccCCCccceeeeccCCceee
Confidence 56789999999999999999999999999998864 1 12344679999999999997 3679999999999999
Q ss_pred EEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeC
Q 002801 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 645 wd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~ 723 (879)
|++++..++..+.+|..+|..|+|+| +|.+|+|+|.|.+-++||+++++.+.....| ..|.+++|+|+ |.++++|+.
T Consensus 246 w~~~~e~~l~~l~gH~~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~D-GSL~~tGGl 323 (459)
T KOG0272|consen 246 WKLSQETPLQDLEGHLARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPD-GSLAATGGL 323 (459)
T ss_pred eccCCCcchhhhhcchhhheeeeecC-CCceeeecccccchhhcccccchhhHhhcccccccceeEecCC-CceeeccCc
Confidence 99999999999999999999999999 9999999999999999999999877666654 56999999999 899999999
Q ss_pred CCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEe
Q 002801 724 DHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLS 802 (879)
Q Consensus 724 d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 802 (879)
|..-+|||+|++++ ++.+.+|.+.|.+|.|+ +|..|+|||.|++++|||++.. .++.++.+|.+.|+.|.|+
T Consensus 324 D~~~RvWDlRtgr~-im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r------~~ly~ipAH~nlVS~Vk~~ 396 (459)
T KOG0272|consen 324 DSLGRVWDLRTGRC-IMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR------SELYTIPAHSNLVSQVKYS 396 (459)
T ss_pred cchhheeecccCcE-EEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccc------ccceecccccchhhheEec
Confidence 99999999999995 99999999999999999 9999999999999999999986 6799999999999999999
Q ss_pred c-CCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 803 V-WDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 803 p-~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
| .|.+|+|+|.|++++||.-.+..++.++ .+|.+.|.++..++++. .++|++.|.+||+|.
T Consensus 397 p~~g~fL~TasyD~t~kiWs~~~~~~~ksL-------------aGHe~kV~s~Dis~d~~-~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 397 PQEGYFLVTASYDNTVKIWSTRTWSPLKSL-------------AGHEGKVISLDISPDSQ-AIATSSFDRTIKLWR 458 (459)
T ss_pred ccCCeEEEEcccCcceeeecCCCcccchhh-------------cCCccceEEEEeccCCc-eEEEeccCceeeecc
Confidence 9 5779999999999999998887777655 47889999999999999 999999999999995
No 5
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.7e-40 Score=340.66 Aligned_cols=262 Identities=25% Similarity=0.378 Sum_probs=241.4
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEecCcccCcCcccccceEE-
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE- 613 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspd--g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~- 613 (879)
++++.+|.+|+|+..+......+ .||...|.++.|+|. +..+|||+.||++++|+++... ++..
T Consensus 191 aT~swsG~~kvW~~~~~~~~~~l-----~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~--------~l~~l 257 (459)
T KOG0272|consen 191 ATGSWSGLVKVWSVPQCNLLQTL-----RGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET--------PLQDL 257 (459)
T ss_pred EEeecCCceeEeecCCcceeEEE-----eccccceeeEEEccCCCccceeeeccCCceeeeccCCCc--------chhhh
Confidence 89999999999999987665554 599999999999996 6689999999999999998631 1111
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
-+|...|..++|+|+ |.+|+|+++|.+-++||+++++.+....+|.+.|.+++|+| ||.+++||+.|..-+|||++++
T Consensus 258 ~gH~~RVs~VafHPs-G~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~-DGSL~~tGGlD~~~RvWDlRtg 335 (459)
T KOG0272|consen 258 EGHLARVSRVAFHPS-GKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQP-DGSLAATGGLDSLGRVWDLRTG 335 (459)
T ss_pred hcchhhheeeeecCC-CceeeecccccchhhcccccchhhHhhcccccccceeEecC-CCceeeccCccchhheeecccC
Confidence 247789999999996 99999999999999999999998888899999999999999 9999999999999999999999
Q ss_pred ceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEE
Q 002801 694 VSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLK 770 (879)
Q Consensus 694 ~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~ 770 (879)
.++..+..| .+|.+|.|+|+ |..|||||.|++++|||+|..+. +.++.+|..-|+.|+|+ .|.+|+|+|.|++++
T Consensus 336 r~im~L~gH~k~I~~V~fsPN-Gy~lATgs~Dnt~kVWDLR~r~~-ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~k 413 (459)
T KOG0272|consen 336 RCIMFLAGHIKEILSVAFSPN-GYHLATGSSDNTCKVWDLRMRSE-LYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVK 413 (459)
T ss_pred cEEEEecccccceeeEeECCC-ceEEeecCCCCcEEEeeeccccc-ceecccccchhhheEecccCCeEEEEcccCccee
Confidence 999999865 56999999999 99999999999999999998885 99999999999999998 789999999999999
Q ss_pred EEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 771 LWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 771 lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
||...+. .+++++.||.+.|.+++.++++.+|+|+|.|+++++|.
T Consensus 414 iWs~~~~------~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 414 IWSTRTW------SPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred eecCCCc------ccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 9999987 88999999999999999999999999999999999995
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-41 Score=351.58 Aligned_cols=210 Identities=20% Similarity=0.202 Sum_probs=170.7
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
++...+...+||++|..++ +.+. ....||||||++||+|.+.+-.. +.+.+..++.+|+|++.||.|||++||+||
T Consensus 225 ~EieILkkL~HP~IV~~~d-~f~~--~ds~YmVlE~v~GGeLfd~vv~n-k~l~ed~~K~~f~Qll~avkYLH~~GI~HR 300 (475)
T KOG0615|consen 225 NEIEILKKLSHPNIVRIKD-FFEV--PDSSYMVLEYVEGGELFDKVVAN-KYLREDLGKLLFKQLLTAVKYLHSQGIIHR 300 (475)
T ss_pred HHHHHHHhcCCCCEEEEee-eeec--CCceEEEEEEecCccHHHHHHhc-cccccchhHHHHHHHHHHHHHHHHcCcccc
Confidence 4444566778888887777 4432 33469999999999999999554 578999999999999999999999999999
Q ss_pred cCCCcceeeccC---CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 107 NVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 107 DlKP~NIll~~~---~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
||||+|||++.+ -.+||+|||+|+..+...
T Consensus 301 DiKPeNILl~~~~e~~llKItDFGlAK~~g~~s----------------------------------------------- 333 (475)
T KOG0615|consen 301 DIKPENILLSNDAEDCLLKITDFGLAKVSGEGS----------------------------------------------- 333 (475)
T ss_pred cCCcceEEeccCCcceEEEecccchhhccccce-----------------------------------------------
Confidence 999999999766 679999999998864221
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC---CCccCcchhHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGV 260 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGv 260 (879)
.+..+||||.|.|||++.+.. +..++|||||||
T Consensus 334 --------------------------------------------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGc 369 (475)
T KOG0615|consen 334 --------------------------------------------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGC 369 (475)
T ss_pred --------------------------------------------ehhhhcCCccccChhheecCCeecccchheeeeccc
Confidence 124579999999999998765 344889999999
Q ss_pred HHHHhhc---CCCCChhhHhHHhhhcc---cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 261 LLFELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 261 il~ell~---pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
+||-+|+ ||............+.. ...|+.|...+.++.+||.+||..||++|||++|+|+||||+..+..
T Consensus 370 vLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 370 VLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCL 446 (475)
T ss_pred eEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccccc
Confidence 9999999 77655444423333333 34578888999999999999999999999999999999999975543
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=342.58 Aligned_cols=209 Identities=21% Similarity=0.211 Sum_probs=176.5
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVV 105 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givH 105 (879)
+++..+..-+++.+|++|+ +++++.. ..+|+||||+||||..+++.. +.+++...-.|+++|++||.|||. ++|||
T Consensus 126 rEl~il~~~~spyIV~~yg-aF~~~~~-~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~IIH 202 (364)
T KOG0581|consen 126 RELEILRSCQSPYIVGFYG-AFYSNGE-EISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERKIIH 202 (364)
T ss_pred HHHHHHhhCCCCCeeeEeE-EEEeCCc-eEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccCeee
Confidence 4555555669999999888 6655544 689999999999999999765 679999999999999999999995 89999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+|||++..|+|||||||.++.+...
T Consensus 203 RDIKPsNlLvNskGeVKicDFGVS~~lvnS-------------------------------------------------- 232 (364)
T KOG0581|consen 203 RDIKPSNLLVNSKGEVKICDFGVSGILVNS-------------------------------------------------- 232 (364)
T ss_pred ccCCHHHeeeccCCCEEeccccccHHhhhh--------------------------------------------------
Confidence 999999999999999999999999764211
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
-..+++||..|||||.+.+..|+.++||||||+.++||
T Consensus 233 ------------------------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~ 270 (364)
T KOG0581|consen 233 ------------------------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLEL 270 (364)
T ss_pred ------------------------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHHH
Confidence 01346999999999999999999999999999999999
Q ss_pred hc---CCCCC----hhhHhHHhhhcccCCCchhhc-cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 266 FC---PFSTG----EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 266 l~---pf~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
+. ||... ......+..+.....|..+.. .++++++|+..||++||.+||++.|+++|||+.....
T Consensus 271 a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 271 AIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred hhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 99 77553 344556666666666655555 8899999999999999999999999999999986543
No 8
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-36 Score=294.14 Aligned_cols=299 Identities=21% Similarity=0.320 Sum_probs=250.7
Q ss_pred cccccCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCC
Q 002801 561 QGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 639 (879)
Q Consensus 561 ~~~l~~h~~~V~~l~fspd-g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~d 639 (879)
.+.+.+|.+.|+.++..+. .+.+.+++.|++|-+|++..... .........-+|...|+.+..++ ++++.++++.|
T Consensus 8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~--~~G~~~r~~~GHsH~v~dv~~s~-dg~~alS~swD 84 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDI--KYGVPVRRLTGHSHFVSDVVLSS-DGNFALSASWD 84 (315)
T ss_pred eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCcc--ccCceeeeeeccceEecceEEcc-CCceEEecccc
Confidence 4667799999999999985 67899999999999999987411 11111223345888999999998 59999999999
Q ss_pred CcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec---CCceEEEEeeCCC-C
Q 002801 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT---KANVCCVQFPLDS-G 715 (879)
Q Consensus 640 g~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~---~~~v~~v~~~p~~-~ 715 (879)
+++++||+.+++..+.|.+|...|.+++|++ +..+++|||.|.+|++|++... +..++.. ...|.||.|+|.. .
T Consensus 85 ~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~ 162 (315)
T KOG0279|consen 85 GTLRLWDLATGESTRRFVGHTKDVLSVAFST-DNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESN 162 (315)
T ss_pred ceEEEEEecCCcEEEEEEecCCceEEEEecC-CCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCC
Confidence 9999999999999999999999999999999 9999999999999999999854 4444443 4559999999985 5
Q ss_pred CEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCC
Q 002801 716 RSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN 794 (879)
Q Consensus 716 ~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~ 794 (879)
.+|++++.|++|++||+++.+. ...+.||.+.++.+.++ ||.++++|+.||++.+||++.+ +.+.++ +|..
T Consensus 163 p~Ivs~s~DktvKvWnl~~~~l-~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~------k~lysl-~a~~ 234 (315)
T KOG0279|consen 163 PIIVSASWDKTVKVWNLRNCQL-RTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEG------KNLYSL-EAFD 234 (315)
T ss_pred cEEEEccCCceEEEEccCCcch-hhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCC------ceeEec-cCCC
Confidence 6899999999999999999885 77888999999999999 9999999999999999999987 566665 4788
Q ss_pred cEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEE
Q 002801 795 VKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIK 874 (879)
Q Consensus 795 ~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~ 874 (879)
.|++++|+|+.-. .|...+..|+|||+.++..+..++.....+ ......-...+++|+++|. +|.++-.|+.|+
T Consensus 235 ~v~sl~fspnryw-L~~at~~sIkIwdl~~~~~v~~l~~d~~g~----s~~~~~~~clslaws~dG~-tLf~g~td~~ir 308 (315)
T KOG0279|consen 235 IVNSLCFSPNRYW-LCAATATSIKIWDLESKAVVEELKLDGIGP----SSKAGDPICLSLAWSADGQ-TLFAGYTDNVIR 308 (315)
T ss_pred eEeeEEecCCcee-EeeccCCceEEEeccchhhhhhcccccccc----ccccCCcEEEEEEEcCCCc-EEEeeecCCcEE
Confidence 9999999996554 455556669999999999888877543332 1122234577899999999 999999999999
Q ss_pred EEEe
Q 002801 875 ILEM 878 (879)
Q Consensus 875 vw~l 878 (879)
+|++
T Consensus 309 v~qv 312 (315)
T KOG0279|consen 309 VWQV 312 (315)
T ss_pred EEEe
Confidence 9986
No 9
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=3.2e-38 Score=322.28 Aligned_cols=279 Identities=18% Similarity=0.316 Sum_probs=246.8
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcC
Q 002801 569 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648 (879)
Q Consensus 569 ~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~ 648 (879)
.+|..|.|.|+|+.|+||+..|.+.+|+..+ ..+..+...|.+.|+++.|+++ +.+++||+.+|.|++|+.+
T Consensus 97 c~V~~v~WtPeGRRLltgs~SGEFtLWNg~~-------fnFEtilQaHDs~Vr~m~ws~~-g~wmiSgD~gG~iKyWqpn 168 (464)
T KOG0284|consen 97 CPVNVVRWTPEGRRLLTGSQSGEFTLWNGTS-------FNFETILQAHDSPVRTMKWSHN-GTWMISGDKGGMIKYWQPN 168 (464)
T ss_pred cceeeEEEcCCCceeEeecccccEEEecCce-------eeHHHHhhhhcccceeEEEccC-CCEEEEcCCCceEEecccc
Confidence 5799999999999999999999999999754 2233444579999999999995 9999999999999999986
Q ss_pred CCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeE
Q 002801 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRI 727 (879)
Q Consensus 649 ~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I 727 (879)
-.........|...|.+++|+| +...|+++|+||+|+|||....+.-..+..+ -.|.|++|||. ..+|++|+.|..|
T Consensus 169 mnnVk~~~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~-kgLiasgskDnlV 246 (464)
T KOG0284|consen 169 MNNVKIIQAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPT-KGLIASGSKDNLV 246 (464)
T ss_pred hhhhHHhhHhhhhhhheeccCC-CCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCc-cceeEEccCCcee
Confidence 4443333344558999999999 8889999999999999999988877777754 45999999999 7799999999999
Q ss_pred EEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCC-
Q 002801 728 YYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD- 805 (879)
Q Consensus 728 ~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~- 805 (879)
++||.+++.+ ++++.+|+..|..++|+ ++++|+|+|.|..++++|+++. +.+.++++|...|++++|+|-.
T Consensus 247 KlWDprSg~c-l~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~m------kEl~~~r~Hkkdv~~~~WhP~~~ 319 (464)
T KOG0284|consen 247 KLWDPRSGSC-LATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTM------KELFTYRGHKKDVTSLTWHPLNE 319 (464)
T ss_pred EeecCCCcch-hhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHh------HHHHHhhcchhhheeeccccccc
Confidence 9999999995 99999999999999999 9999999999999999999976 7889999999999999999964
Q ss_pred CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 806 GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 806 ~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
..|++|+.||.|..|.+...+|+..+. .+|.+.|++++|+|-|. +|++|+.|.++++|.
T Consensus 320 ~lftsgg~Dgsvvh~~v~~~~p~~~i~------------~AHd~~iwsl~~hPlGh-il~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 320 SLFTSGGSDGSVVHWVVGLEEPLGEIP------------PAHDGEIWSLAYHPLGH-ILATGSNDRTVRFWT 378 (464)
T ss_pred cceeeccCCCceEEEeccccccccCCC------------cccccceeeeeccccce-eEeecCCCcceeeec
Confidence 588999999999999998666665443 46788899999999999 999999999999995
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.7e-39 Score=316.13 Aligned_cols=220 Identities=19% Similarity=0.187 Sum_probs=178.4
Q ss_pred ccccccccccccCCCCCcccccc-----cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhh---cCC
Q 002801 4 RLLRGERFGVRGDDSNDFELRKH-----SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL---DKP 75 (879)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l---~~~ 75 (879)
+++.|+.++.++-. .+..=+++ .+.-.+...+|+|+|..|. ...++.+.-++|+||||.+|+|.+.+ ++.
T Consensus 40 ~~~~g~l~a~K~i~-f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~-~~f~~~~evlnivmE~c~~GDLsqmIk~~K~q 117 (375)
T KOG0591|consen 40 CLLDGKLVALKKIQ-FGMMDAKARQDCVKEISLLKQLNHPNIVQYYA-HSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQ 117 (375)
T ss_pred eccCcchhhhhhcc-hhhccHHHHHHHHHHHHHHHhcCCchHHHHHH-HhhhccchhhHHHHHhhcccCHHHHHHHHHhc
Confidence 45667777776553 11111222 2333567799999998776 44456666689999999999999988 456
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhhh--cC--cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCC
Q 002801 76 KRSVDVYECLHIFRQIVEIVYAAHS--QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDL 151 (879)
Q Consensus 76 ~~~l~~~~~~~i~~qi~~~l~~lHs--~g--ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 151 (879)
++.+++..++++|.|++.||..+|+ .. |+||||||.||+|+.+|.||+.|||+++.+.....
T Consensus 118 kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t-------------- 183 (375)
T KOG0591|consen 118 KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT-------------- 183 (375)
T ss_pred cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhH--------------
Confidence 6789999999999999999999999 45 99999999999999999999999999988633200
Q ss_pred CCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccc
Q 002801 152 SSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQIL 231 (879)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 231 (879)
...+
T Consensus 184 ----------------------------------------------------------------------------fA~S 187 (375)
T KOG0591|consen 184 ----------------------------------------------------------------------------FAHS 187 (375)
T ss_pred ----------------------------------------------------------------------------HHHh
Confidence 1245
Q ss_pred cccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchh-hccChhhHHHHHHhcC
Q 002801 232 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLH 307 (879)
Q Consensus 232 ~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~ 307 (879)
++|||+||+||.+.+.+|+++||||||||++|||.. ||.+. +.......+.++.+||.+ ...+.++..+|..|+.
T Consensus 188 ~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~ 266 (375)
T KOG0591|consen 188 LVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIA 266 (375)
T ss_pred hcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHcc
Confidence 799999999999999999999999999999999988 88665 556666777788887777 5567889999999999
Q ss_pred CCCCCCCCH
Q 002801 308 PEPSGRPKM 316 (879)
Q Consensus 308 ~dP~~Rpt~ 316 (879)
.||..||+.
T Consensus 267 vd~~~RP~t 275 (375)
T KOG0591|consen 267 VDPEQRPDT 275 (375)
T ss_pred CCcccCCCc
Confidence 999999996
No 11
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=3e-36 Score=297.22 Aligned_cols=290 Identities=24% Similarity=0.336 Sum_probs=256.5
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
.+.+|.+.|+.+.|+|+|.+|||||.|..|.+|++...... . .....|.+.|..+.|.+ +++.|++++.|.+|
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN-~-----~~lkgHsgAVM~l~~~~-d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN-F-----WVLKGHSGAVMELHGMR-DGSHILSCGTDKTV 114 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc-e-----eeeccccceeEeeeecc-CCCEEEEecCCceE
Confidence 46699999999999999999999999999999996643221 1 12237999999999998 59999999999999
Q ss_pred EEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEe
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs 722 (879)
+.||+++|++++.+++|.+-|++++-+.....++.||++|++++|||+++...++++..+-++++|.|... +..+.+|+
T Consensus 115 ~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~-s~qv~sgg 193 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDT-SDQVISGG 193 (338)
T ss_pred EEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccc-ccceeecc
Confidence 99999999999999999999999996655667899999999999999999999999999999999999988 78899999
Q ss_pred CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCC--cE--E
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN--VK--N 797 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~--~v--~ 797 (879)
-|+.|++||+|+... .+++.||..+|+.+..+ +|.++.+-+.|+++++||++..... .+++..+.+|.. ++ .
T Consensus 194 Idn~ikvWd~r~~d~-~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~--~R~v~if~g~~hnfeknlL 270 (338)
T KOG0265|consen 194 IDNDIKVWDLRKNDG-LYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPS--QRCVKIFQGHIHNFEKNLL 270 (338)
T ss_pred ccCceeeeccccCcc-eEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCC--CceEEEeecchhhhhhhcc
Confidence 999999999999885 89999999999999999 9999999999999999999976432 366888888754 33 4
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 798 FVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 798 ~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
.++|+|++.++.+|+.|..|++||......+..+ .+|.+.|.++.|+|..+ +|.+|++|.+|.+=+
T Consensus 271 ~cswsp~~~~i~ags~dr~vyvwd~~~r~~lykl-------------pGh~gsvn~~~Fhp~e~-iils~~sdk~i~lge 336 (338)
T KOG0265|consen 271 KCSWSPNGTKITAGSADRFVYVWDTTSRRILYKL-------------PGHYGSVNEVDFHPTEP-IILSCSSDKTIYLGE 336 (338)
T ss_pred eeeccCCCCccccccccceEEEeecccccEEEEc-------------CCcceeEEEeeecCCCc-EEEEeccCceeEeec
Confidence 5689999999999999999999998776655544 47889999999999999 999999999998644
No 12
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.7e-35 Score=290.65 Aligned_cols=283 Identities=16% Similarity=0.245 Sum_probs=247.8
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
|.||.+.|.++.|++|+++|++++.||++-|||.-+..+... +. -....|-.++|+|. ++.+|+|+-|..+.
T Consensus 51 LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~ha------ip-l~s~WVMtCA~sPS-g~~VAcGGLdN~Cs 122 (343)
T KOG0286|consen 51 LKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHA------IP-LPSSWVMTCAYSPS-GNFVACGGLDNKCS 122 (343)
T ss_pred ecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeE------Ee-cCceeEEEEEECCC-CCeEEecCcCceeE
Confidence 459999999999999999999999999999999876433211 11 13467889999996 99999999999999
Q ss_pred EEEcCCC------eEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCC
Q 002801 644 VWDVSRS------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGR 716 (879)
Q Consensus 644 vwd~~~~------~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~ 716 (879)
||++.+. +..+.+.+|++-+.|+.|-. ..+|+|||.|.+.-+||+++++.+..|.. .+.|.++.+.|.+++
T Consensus 123 iy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~n 200 (343)
T KOG0286|consen 123 IYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGN 200 (343)
T ss_pred EEecccccccccceeeeeecCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCC
Confidence 9999755 45567889999999999985 57899999999999999999999999985 466999999995599
Q ss_pred EEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCC--C
Q 002801 717 SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH--T 793 (879)
Q Consensus 717 ~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h--~ 793 (879)
.+++|+.|+..++||+|.+. .+.+|.+|.+-|++|+|. +|.-++|||.|+++++||++.. ..+..|... .
T Consensus 201 tFvSg~cD~~aklWD~R~~~-c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD------~~~a~ys~~~~~ 273 (343)
T KOG0286|consen 201 TFVSGGCDKSAKLWDVRSGQ-CVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRAD------QELAVYSHDSII 273 (343)
T ss_pred eEEecccccceeeeeccCcc-eeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCC------cEEeeeccCccc
Confidence 99999999999999999997 499999999999999998 9999999999999999999986 556666532 3
Q ss_pred CcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcE
Q 002801 794 NVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNI 873 (879)
Q Consensus 794 ~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I 873 (879)
.+|++|+||..|++|.+|..|..+.+||.-.++.+..+ .+|...|+++..+|||. .|+|++.|.++
T Consensus 274 ~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L-------------~GHeNRvScl~~s~DG~-av~TgSWDs~l 339 (343)
T KOG0286|consen 274 CGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVL-------------AGHENRVSCLGVSPDGM-AVATGSWDSTL 339 (343)
T ss_pred CCceeEEEcccccEEEeeecCCceeEeeccccceEEEe-------------eccCCeeEEEEECCCCc-EEEecchhHhe
Confidence 47999999999999999999999999997665554433 47889999999999999 99999999999
Q ss_pred EEEE
Q 002801 874 KILE 877 (879)
Q Consensus 874 ~vw~ 877 (879)
|||.
T Consensus 340 riW~ 343 (343)
T KOG0286|consen 340 RIWA 343 (343)
T ss_pred eecC
Confidence 9994
No 13
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-38 Score=341.12 Aligned_cols=204 Identities=22% Similarity=0.245 Sum_probs=169.8
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
++.......|+|+|+++. .++ +....|||.|+|..++|.+++++ .++++|.|++.+++||+.||.|||+++|||||
T Consensus 68 EIeIHr~L~HpnIV~f~~-~FE--Ds~nVYivLELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~GlkYLH~~~IiHRD 143 (592)
T KOG0575|consen 68 EIEIHRSLKHPNIVQFYH-FFE--DSNNVYIVLELCHRGSLMELLKR-RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRD 143 (592)
T ss_pred HHHHHHhcCCCcEEeeee-Eee--cCCceEEEEEecCCccHHHHHHh-cCCCCcHHHHHHHHHHHHHHHHHHhcCceecc
Confidence 344455688999999888 443 45578999999999999999974 47899999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||..||||+.+.+|||+|||+|..+..+..
T Consensus 144 LKLGNlfL~~~~~VKIgDFGLAt~le~~~E-------------------------------------------------- 173 (592)
T KOG0575|consen 144 LKLGNLFLNENMNVKIGDFGLATQLEYDGE-------------------------------------------------- 173 (592)
T ss_pred cchhheeecCcCcEEecccceeeeecCccc--------------------------------------------------
Confidence 999999999999999999999977533210
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
+..+.||||-|.|||++.....++.+||||+||+||.||.
T Consensus 174 ----------------------------------------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~ 213 (592)
T KOG0575|consen 174 ----------------------------------------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLV 213 (592)
T ss_pred ----------------------------------------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhh
Confidence 1234699999999999999999999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
||.+..-...+..+.......|. ..+..+++||.++|.+||.+|||+++||.|+||..
T Consensus 214 G~PPFetk~vkety~~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 214 GRPPFETKTVKETYNKIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred CCCCcccchHHHHHHHHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 77655444444333333333333 66789999999999999999999999999999953
No 14
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-38 Score=330.30 Aligned_cols=208 Identities=19% Similarity=0.263 Sum_probs=170.3
Q ss_pred cCceeecccc-cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 27 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
|++..+.+.| |+|++..+. +..|... .+|+||||| ..+|.++++.+++.|++..++.|+.||++||+|+|.+|+.|
T Consensus 57 REvksL~kln~hpniikL~E-vi~d~~~-~L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFH 133 (538)
T KOG0661|consen 57 REVKSLRKLNPHPNIIKLKE-VIRDNDR-ILYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFH 133 (538)
T ss_pred HHHHHHHhcCCCCcchhhHH-HhhccCc-eEeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 5555667778 999999998 6555443 799999999 67999999888899999999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+|||+.....+||+|||+|+...+.
T Consensus 134 RDlKPENiLi~~~~~iKiaDFGLARev~Sk-------------------------------------------------- 163 (538)
T KOG0661|consen 134 RDLKPENILISGNDVIKIADFGLAREVRSK-------------------------------------------------- 163 (538)
T ss_pred ccCChhheEecccceeEecccccccccccC--------------------------------------------------
Confidence 999999999998899999999999875221
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~e 264 (879)
. -.|.++-|.||+|||++.... |+.+.||||+|||++|
T Consensus 164 -------------------------------------p----PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 164 -------------------------------------P----PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred -------------------------------------C----CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 0 125678899999999987655 9999999999999999
Q ss_pred hhc--CCCCChhhHhHHhhhccc---------------------CCC--------chhhccChhhHHHHHHhcCCCCCCC
Q 002801 265 LFC--PFSTGEEKTRTMSSLRHR---------------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 265 ll~--pf~~~~~~~~~~~~~~~~---------------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
+.+ |.+++....+.+..+..- .+| ..+...++++..+|.+||.+||.+|
T Consensus 203 l~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 203 LYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 999 777665444443222110 011 1223466788999999999999999
Q ss_pred CCHHHHhhcccccCC
Q 002801 314 PKMGELLQSEFLNEP 328 (879)
Q Consensus 314 pt~~evl~hp~~~~~ 328 (879)
|||.|+|+||||+..
T Consensus 283 pTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 283 PTASQALQHPFFQVG 297 (538)
T ss_pred ccHHHHhcCcccccc
Confidence 999999999999854
No 15
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=9.5e-35 Score=285.45 Aligned_cols=272 Identities=21% Similarity=0.290 Sum_probs=237.2
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
..+++++.||.+-+||.-+..-..-+. -.+..|-.++|+|.|.++|+||-|+...||++.+..++.. .......
T Consensus 68 r~ivSaSqDGklIvWDs~TtnK~haip-----l~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~-~~v~r~l 141 (343)
T KOG0286|consen 68 RRIVSASQDGKLIVWDSFTTNKVHAIP-----LPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGN-VRVSREL 141 (343)
T ss_pred CeEEeeccCCeEEEEEcccccceeEEe-----cCceeEEEEEECCCCCeEEecCcCceeEEEeccccccccc-ceeeeee
Confidence 334899999999999987633222221 2357899999999999999999999999999985322221 1112234
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
..|.+-++|+.|-+ ...|++++.|.++.+||+++++.+..|.+|.+.|.+++++|.+++.|++|+.|++.+|||++.+
T Consensus 142 ~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~ 219 (343)
T KOG0286|consen 142 AGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG 219 (343)
T ss_pred cCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc
Confidence 57999999999986 7889999999999999999999999999999999999999989999999999999999999999
Q ss_pred ceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccC--CCCEEEEEEc-CCCEEEEEEcCCcE
Q 002801 694 VSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH--NKTVSYVKFV-DATTLVSASTDNTL 769 (879)
Q Consensus 694 ~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h--~~~V~~v~fs-~~~~l~s~s~D~~i 769 (879)
.++++|.. .+.|++|+|.|+ |.-|++|+.|++.++||+|..+. +..+... ..+|++|.|+ .|++|++|..|.++
T Consensus 220 ~c~qtF~ghesDINsv~ffP~-G~afatGSDD~tcRlyDlRaD~~-~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c 297 (343)
T KOG0286|consen 220 QCVQTFEGHESDINSVRFFPS-GDAFATGSDDATCRLYDLRADQE-LAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTC 297 (343)
T ss_pred ceeEeecccccccceEEEccC-CCeeeecCCCceeEEEeecCCcE-EeeeccCcccCCceeEEEcccccEEEeeecCCce
Confidence 99999985 567999999999 89999999999999999998874 7777632 4589999999 99999999999999
Q ss_pred EEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 770 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 770 ~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
.+||.-.+ ..+..+.||.+.|.++..+|||..++|||.|..++||.
T Consensus 298 ~vWDtlk~------e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 298 NVWDTLKG------ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred eEeecccc------ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999887 67889999999999999999999999999999999994
No 16
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-37 Score=336.62 Aligned_cols=212 Identities=20% Similarity=0.244 Sum_probs=177.4
Q ss_pred ccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 22 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
-.+-|++++.+.-..|+|++..|+ |.+ .+.++|+|.||++||.|+++|-+. +++++.++.++|+||+.||.|+|..
T Consensus 56 ~~~IerEIviMkLi~HpnVl~Lyd-Vwe--~~~~lylvlEyv~gGELFdylv~k-G~l~e~eaa~ff~QIi~gv~yCH~~ 131 (786)
T KOG0588|consen 56 PAGIEREIVIMKLIEHPNVLRLYD-VWE--NKQHLYLVLEYVPGGELFDYLVRK-GPLPEREAAHFFRQILDGVSYCHAF 131 (786)
T ss_pred ccchhhhhHHHHHhcCCCeeeeee-eec--cCceEEEEEEecCCchhHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 346678888888889999999998 544 466899999999999999999554 6799999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
+|+||||||+|+||+..+++||+|||+|..-...+
T Consensus 132 ~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk--------------------------------------------- 166 (786)
T KOG0588|consen 132 NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK--------------------------------------------- 166 (786)
T ss_pred cceeccCCchhhhhhcccCEeeeccceeecccCCc---------------------------------------------
Confidence 99999999999999999999999999996521110
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCC-CccCcchhHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 260 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGv 260 (879)
+ ...-||+|+|+|||+++|.+| +.++||||.||
T Consensus 167 --------------------------l--------------------LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGV 200 (786)
T KOG0588|consen 167 --------------------------L--------------------LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGV 200 (786)
T ss_pred --------------------------c--------------------ccccCCCcccCCchhhcCCCCCCCccccchhHH
Confidence 0 012499999999999999997 89999999999
Q ss_pred HHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 261 il~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
|||.||+ ||..++-. ..+..++++.+ ..+...++++.+||.+||..||++|+|++||+.|||+.....
T Consensus 201 ILfALLtG~LPFdDdNir-~LLlKV~~G~f-~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 201 ILFALLTGKLPFDDDNIR-VLLLKVQRGVF-EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS 271 (786)
T ss_pred HHHHHHhCCCCCCCccHH-HHHHHHHcCcc-cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence 9999999 99755444 44444455544 222567799999999999999999999999999999976443
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-37 Score=329.04 Aligned_cols=212 Identities=16% Similarity=0.162 Sum_probs=169.0
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|+-++.+|. -+.| +..+|+|+||+++|+|.++|++- +.|++..++.++.||++||+|||+.|||||||||+||||
T Consensus 132 ~hPgivkLy~-TFQD--~~sLYFvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL 207 (604)
T KOG0592|consen 132 GHPGIVKLYF-TFQD--EESLYFVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL 207 (604)
T ss_pred CCCCeEEEEE-Eeec--ccceEEEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE
Confidence 7888888777 4444 44689999999999999999766 789999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++++||+|||.|+.+........ ..+..
T Consensus 208 d~dmhikITDFGsAK~l~~~~~~~~-------------------------------------------------~~~~~- 237 (604)
T KOG0592|consen 208 DKDGHIKITDFGSAKILSPSQKSQE-------------------------------------------------NPVDP- 237 (604)
T ss_pred cCCCcEEEeeccccccCChhhcccc-------------------------------------------------CccCc-
Confidence 9999999999999998644311100 00000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
.+.. .+...++||..|.+||++.....++++|||+||||||.|++ ||...
T Consensus 238 -------------------------~~a~--s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~ 290 (604)
T KOG0592|consen 238 -------------------------NQAS--SRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA 290 (604)
T ss_pred -------------------------cccc--CcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence 0000 01245799999999999999999999999999999999999 77666
Q ss_pred hhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 273 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
.+......++.-.. +.+...++.+.+||.++|..||.+|+|+.||.+||||.++..
T Consensus 291 NeyliFqkI~~l~y--~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw 346 (604)
T KOG0592|consen 291 NEYLIFQKIQALDY--EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW 346 (604)
T ss_pred cHHHHHHHHHHhcc--cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence 65554444443322 222344478899999999999999999999999999998654
No 18
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=4.5e-35 Score=281.38 Aligned_cols=275 Identities=17% Similarity=0.268 Sum_probs=236.7
Q ss_pred CCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe--EEEEec
Q 002801 580 GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ--VLTEMR 657 (879)
Q Consensus 580 g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~--~~~~~~ 657 (879)
.-+|||+|.|-+|++|...++....... ...+.|+.++..|. +..||+++ ...|++||++++. ++..|.
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~rTiq-------h~dsqVNrLeiTpd-k~~LAaa~-~qhvRlyD~~S~np~Pv~t~e 80 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICSRTIQ-------HPDSQVNRLEITPD-KKDLAAAG-NQHVRLYDLNSNNPNPVATFE 80 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEEEEEe-------cCccceeeEEEcCC-cchhhhcc-CCeeEEEEccCCCCCceeEEe
Confidence 4589999999999999998865432221 24578999999994 88888887 5789999998764 689999
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCce
Q 002801 658 EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKI 737 (879)
Q Consensus 658 ~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~ 737 (879)
+|++.|++|.|.. +|..++|||+||+++|||++...+.+.+.+.++|++|..+|+ ...|++|..+|.|++||+++...
T Consensus 81 ~h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpn-QteLis~dqsg~irvWDl~~~~c 158 (311)
T KOG0315|consen 81 GHTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPN-QTELISGDQSGNIRVWDLGENSC 158 (311)
T ss_pred ccCCceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCC-cceEEeecCCCcEEEEEccCCcc
Confidence 9999999999998 999999999999999999999888899999999999999999 78899999999999999998753
Q ss_pred eeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCc
Q 002801 738 PLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNE 816 (879)
Q Consensus 738 ~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~ 816 (879)
.-.-.......|.++... ||..|+.+...|.+.+|++..........|+..|+.|..-+..+.+||+++|||++|.|.+
T Consensus 159 ~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdkt 238 (311)
T KOG0315|consen 159 THELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKT 238 (311)
T ss_pred ccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCce
Confidence 222233345678899887 9999999999999999999887666667889999999999999999999999999999999
Q ss_pred EEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 817 VFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 817 v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
|+||+.+.- ++ ......+|..+|+..+|+.+|. +|+||++|+..++|++
T Consensus 239 v~iwn~~~~-----~k-------le~~l~gh~rWvWdc~FS~dg~-YlvTassd~~~rlW~~ 287 (311)
T KOG0315|consen 239 VKIWNTDDF-----FK-------LELVLTGHQRWVWDCAFSADGE-YLVTASSDHTARLWDL 287 (311)
T ss_pred EEEEecCCc-----ee-------eEEEeecCCceEEeeeeccCcc-EEEecCCCCceeeccc
Confidence 999998753 11 0012267889999999999999 9999999999999986
No 19
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=2.4e-34 Score=298.97 Aligned_cols=309 Identities=21% Similarity=0.338 Sum_probs=266.7
Q ss_pred eecccccCceEEEeecC----cEEEEEecccc-----ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcc
Q 002801 536 WINPFLEGLCKYLSFSK----LRVKADLNQGD-----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD 606 (879)
Q Consensus 536 ~~~~~~d~~i~~w~~~~----~~~~~~l~~~~-----l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~ 606 (879)
+.++..+-+.++|++.. +.....|++.. -......|++++|+.+|..||||..||.++||+........
T Consensus 194 lasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~t-- 271 (524)
T KOG0273|consen 194 LASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLIST-- 271 (524)
T ss_pred hhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhh--
Confidence 45667788999998764 22223333221 11234689999999999999999999999999987632221
Q ss_pred cccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEE
Q 002801 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686 (879)
Q Consensus 607 ~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~ 686 (879)
.-.|+++|.+|.|+.. +.+|++++-||++.+||..+++....+..|..+.-.|.|- +...|++++.|+.|+
T Consensus 272 ------l~~HkgPI~slKWnk~-G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~--~~~~F~ts~td~~i~ 342 (524)
T KOG0273|consen 272 ------LGQHKGPIFSLKWNKK-GTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQ--SNDEFATSSTDGCIH 342 (524)
T ss_pred ------hhccCCceEEEEEcCC-CCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEe--cCceEeecCCCceEE
Confidence 1248999999999985 9999999999999999999999999999999988889997 467899999999999
Q ss_pred EEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-C--------
Q 002801 687 LWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-D-------- 756 (879)
Q Consensus 687 iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~-------- 756 (879)
++-+....++.++. |+++|.++.|+|. +.+|+++|.|++++||....... ...+.+|.+.|+.+.|+ +
T Consensus 343 V~kv~~~~P~~t~~GH~g~V~alk~n~t-g~LLaS~SdD~TlkiWs~~~~~~-~~~l~~Hskei~t~~wsp~g~v~~n~~ 420 (524)
T KOG0273|consen 343 VCKVGEDRPVKTFIGHHGEVNALKWNPT-GSLLASCSDDGTLKIWSMGQSNS-VHDLQAHSKEIYTIKWSPTGPVTSNPN 420 (524)
T ss_pred EEEecCCCcceeeecccCceEEEEECCC-CceEEEecCCCeeEeeecCCCcc-hhhhhhhccceeeEeecCCCCccCCCc
Confidence 99999999998887 4677999999999 89999999999999999988774 88899999999999996 3
Q ss_pred -CCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCC
Q 002801 757 -ATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNH 835 (879)
Q Consensus 757 -~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~ 835 (879)
+..|++++.|++|++||+..+ .++++|..|+.+|++|+|||+|+|+|+|+-||.|.+|+..+++...++.
T Consensus 421 ~~~~l~sas~dstV~lwdv~~g------v~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~--- 491 (524)
T KOG0273|consen 421 MNLMLASASFDSTVKLWDVESG------VPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQ--- 491 (524)
T ss_pred CCceEEEeecCCeEEEEEccCC------ceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeec---
Confidence 347999999999999999998 8999999999999999999999999999999999999999988777654
Q ss_pred CCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 836 ADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 836 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
..+.|..|||+-+|+ .|.++-+||.+++.|+
T Consensus 492 -----------~~~~Ifel~Wn~~G~-kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 492 -----------GTGGIFELCWNAAGD-KLGACASDGSVCVLDL 522 (524)
T ss_pred -----------CCCeEEEEEEcCCCC-EEEEEecCCCceEEEe
Confidence 234599999999999 9999999999999986
No 20
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-37 Score=316.49 Aligned_cols=205 Identities=19% Similarity=0.224 Sum_probs=167.9
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+||-++..+. . ......+|||++|+.||.|+-+|.+. +.+++..++.++.+|+.||.|||++|||||||||+
T Consensus 79 L~~v~hPFiv~l~y-s--FQt~~kLylVld~~~GGeLf~hL~~e-g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPE 154 (357)
T KOG0598|consen 79 LSKIKHPFIVKLIY-S--FQTEEKLYLVLDYLNGGELFYHLQRE-GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPE 154 (357)
T ss_pred HHhCCCCcEeeeEE-e--cccCCeEEEEEeccCCccHHHHHHhc-CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHH
Confidence 44578888888776 2 33456899999999999999999655 67999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||||+..|+++|+|||+|+..-....
T Consensus 155 NILLd~~GHi~LtDFgL~k~~~~~~~------------------------------------------------------ 180 (357)
T KOG0598|consen 155 NILLDEQGHIKLTDFGLCKEDLKDGD------------------------------------------------------ 180 (357)
T ss_pred HeeecCCCcEEEeccccchhcccCCC------------------------------------------------------
Confidence 99999999999999999986311100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
....+|||+.|||||++.+.+|+.++|+|||||+||||++ |
T Consensus 181 ------------------------------------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pP 224 (357)
T KOG0598|consen 181 ------------------------------------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPP 224 (357)
T ss_pred ------------------------------------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCC
Confidence 1133699999999999999999999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC----CHHHHhhcccccCCcCc
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEPRDS 331 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----t~~evl~hp~~~~~~~~ 331 (879)
|...........++... .+..+.-.++.+++++.++|..||++|. .+.++-.||||..+...
T Consensus 225 F~~~~~~~~~~~I~~~k-~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~ 290 (357)
T KOG0598|consen 225 FYAEDVKKMYDKILKGK-LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWE 290 (357)
T ss_pred CcCccHHHHHHHHhcCc-CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHH
Confidence 75554444444444443 3333333568899999999999999995 68999999999987644
No 21
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=3.4e-34 Score=275.38 Aligned_cols=277 Identities=17% Similarity=0.279 Sum_probs=242.6
Q ss_pred ceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEe
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 535 ~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
-++++..|.+|++|...++++.+++++.+ +.|+.+.+.||++.||+|+. ..|++||+.+.... |+..+
T Consensus 12 iLvsA~YDhTIRfWqa~tG~C~rTiqh~d-----sqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~------Pv~t~ 79 (311)
T KOG0315|consen 12 ILVSAGYDHTIRFWQALTGICSRTIQHPD-----SQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPN------PVATF 79 (311)
T ss_pred EEEeccCcceeeeeehhcCeEEEEEecCc-----cceeeEEEcCCcchhhhccC-CeeEEEEccCCCCC------ceeEE
Confidence 34788999999999999999999998655 68999999999999998887 49999999875332 34443
Q ss_pred -ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 615 -ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 615 -~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
.|...|..+.|.- ++.++++|+.||+++|||++...+.+.| .|..+|++|..+| +...|++|..+|.|++||+...
T Consensus 80 e~h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhp-nQteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 80 EGHTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHP-NQTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred eccCCceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhc-cCCCCcceEEecC-CcceEEeecCCCcEEEEEccCC
Confidence 4778999999987 5999999999999999999987777666 4789999999999 8889999999999999999988
Q ss_pred ceEEEEec--CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc-----eeeEEEccCCCCEEEEEEc-CCCEEEEEEc
Q 002801 694 VSIGTIKT--KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-----IPLCTLIGHNKTVSYVKFV-DATTLVSAST 765 (879)
Q Consensus 694 ~~i~~~~~--~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~-----~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~ 765 (879)
.+...+-. ...|.++...|+ |.+++.+..-|..++|++-+.. .|+..++.|...+..+.++ ++++|+++|.
T Consensus 157 ~c~~~liPe~~~~i~sl~v~~d-gsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ss 235 (311)
T KOG0315|consen 157 SCTHELIPEDDTSIQSLTVMPD-GSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSS 235 (311)
T ss_pred ccccccCCCCCcceeeEEEcCC-CcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecC
Confidence 76665543 456999999999 8899999999999999997643 5788899999999999999 9999999999
Q ss_pred CCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecc
Q 002801 766 DNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFN 832 (879)
Q Consensus 766 D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~ 832 (879)
|.+++||++... .+.-..+.+|...++.++||.+|+||+|||.|+.+++|++..++.+..+.
T Consensus 236 dktv~iwn~~~~-----~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~ 297 (311)
T KOG0315|consen 236 DKTVKIWNTDDF-----FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQ 297 (311)
T ss_pred CceEEEEecCCc-----eeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecC
Confidence 999999999886 25567888999999999999999999999999999999999888776553
No 22
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=317.47 Aligned_cols=240 Identities=17% Similarity=0.189 Sum_probs=187.2
Q ss_pred cccccccccCC--CCCccc--ccccCceeecccccccCCCCCCccccc---ccccCceEEEEeeCCcchhhhhcCCCCCC
Q 002801 7 RGERFGVRGDD--SNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCEN---EAAIDPFVHAIEWGDVSLRQWLDKPKRSV 79 (879)
Q Consensus 7 ~~~~~~~~~~~--~~~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~lv~e~~~g~sL~~~l~~~~~~l 79 (879)
.|++++++.-. -....+ |..|++..+.|..|.|++..+. +... +.-.+.|+|+|++ +.+|.+.|+.. ..|
T Consensus 46 t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~d-i~~p~~~~~f~DvYiV~elM-etDL~~iik~~-~~L 122 (359)
T KOG0660|consen 46 TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLD-IFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQ-QDL 122 (359)
T ss_pred CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEe-ecccccccccceeEEehhHH-hhHHHHHHHcC-ccc
Confidence 45777776543 122222 6668888888889999998887 4433 4456899999999 88999999665 459
Q ss_pred ChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchh
Q 002801 80 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (879)
Q Consensus 80 ~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (879)
+...+..++.||++||.|+||.+|+||||||+|++++.+..+||+|||+|+.......+
T Consensus 123 ~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~--------------------- 181 (359)
T KOG0660|consen 123 TDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED--------------------- 181 (359)
T ss_pred cHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcc---------------------
Confidence 99999999999999999999999999999999999999999999999999875322000
Q ss_pred hhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccccccccee
Q 002801 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (879)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (879)
.-+|..+.|.||+
T Consensus 182 -------------------------------------------------------------------~~mTeYVaTRWYR 194 (359)
T KOG0660|consen 182 -------------------------------------------------------------------GFMTEYVATRWYR 194 (359)
T ss_pred -------------------------------------------------------------------cchhcceeeeeec
Confidence 0236678899999
Q ss_pred ccccccC-CCCCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhc---------------------------cc---C
Q 002801 240 SPEELAG-APVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLR---------------------------HR---V 286 (879)
Q Consensus 240 aPE~~~~-~~~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~---------------------------~~---~ 286 (879)
|||++.. ..|+.+.||||+||||.||++ |.+.+......+..+. .. .
T Consensus 195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~ 274 (359)
T KOG0660|consen 195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP 274 (359)
T ss_pred CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC
Confidence 9999865 459999999999999999999 7666644333322211 10 1
Q ss_pred CCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchHHHHH
Q 002801 287 LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREA 337 (879)
Q Consensus 287 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~e~~~ 337 (879)
+...++...+.+.+|+.+||..||.+|+|++|+|+||||.....+..|...
T Consensus 275 f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~ 325 (359)
T KOG0660|consen 275 FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVC 325 (359)
T ss_pred HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCC
Confidence 112345667889999999999999999999999999999988877776543
No 23
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.1e-34 Score=292.89 Aligned_cols=283 Identities=20% Similarity=0.300 Sum_probs=255.7
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
+.+|...|+.+-|+|+-.++++++.|++|++||+.++..+. ...+|...+.+|+|+.+ +.+|++++.|-.++
T Consensus 104 l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~-------~LrGHt~sv~di~~~a~-Gk~l~tcSsDl~~~ 175 (406)
T KOG0295|consen 104 LAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELER-------SLRGHTDSVFDISFDAS-GKYLATCSSDLSAK 175 (406)
T ss_pred hhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhh-------hhhccccceeEEEEecC-ccEEEecCCccchh
Confidence 45899999999999999999999999999999998754421 11357788999999986 89999999999999
Q ss_pred EEEcCC-CeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc-eEEEEeeCCCCCEEEEE
Q 002801 644 VWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN-VCCVQFPLDSGRSLAFG 721 (879)
Q Consensus 644 vwd~~~-~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~-v~~v~~~p~~~~~l~tg 721 (879)
+||..+ .++++.+.+|+..|.++.|-| .+.+++|++.|.+|+.|++.++.++.++..+.. |..|+.+.| |.++|++
T Consensus 176 LWd~~~~~~c~ks~~gh~h~vS~V~f~P-~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~D-Gti~As~ 253 (406)
T KOG0295|consen 176 LWDFDTFFRCIKSLIGHEHGVSSVFFLP-LGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQD-GTIIASC 253 (406)
T ss_pred heeHHHHHHHHHHhcCcccceeeEEEEe-cCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCC-eeEEEec
Confidence 999977 567778889999999999999 899999999999999999999999999997655 999999998 9999999
Q ss_pred eCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-----------CC-----CEEEEEEcCCcEEEEecCCCcccccCCc
Q 002801 722 SADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-----------DA-----TTLVSASTDNTLKLWDLSMCTSRVIDTP 785 (879)
Q Consensus 722 s~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-----------~~-----~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 785 (879)
+.|.+|++|-+.+... ...+..|..+|.+++|. .+ .+++++|.|++|++||+.++ .+
T Consensus 254 s~dqtl~vW~~~t~~~-k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg------~c 326 (406)
T KOG0295|consen 254 SNDQTLRVWVVATKQC-KAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG------MC 326 (406)
T ss_pred CCCceEEEEEeccchh-hhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC------eE
Confidence 9999999999998863 67888999999999982 22 58999999999999999998 89
Q ss_pred eEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEE
Q 002801 786 LHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLV 865 (879)
Q Consensus 786 ~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~ 865 (879)
+.++.||.+.|..++|+|.|+||+++.+|+++++||+....++..+ ..|..+|+++.|+.+.+ +++
T Consensus 327 L~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~-------------~ah~hfvt~lDfh~~~p-~Vv 392 (406)
T KOG0295|consen 327 LFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTL-------------EAHEHFVTSLDFHKTAP-YVV 392 (406)
T ss_pred EEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeecc-------------CCCcceeEEEecCCCCc-eEE
Confidence 9999999999999999999999999999999999999988776554 46788999999999999 999
Q ss_pred EEeCCCcEEEEE
Q 002801 866 AANSSGNIKILE 877 (879)
Q Consensus 866 s~~~Dg~I~vw~ 877 (879)
||+-|..+|+|+
T Consensus 393 TGsVdqt~KvwE 404 (406)
T KOG0295|consen 393 TGSVDQTVKVWE 404 (406)
T ss_pred eccccceeeeee
Confidence 999999999997
No 24
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=331.30 Aligned_cols=204 Identities=23% Similarity=0.325 Sum_probs=168.9
Q ss_pred Cceeecccc-cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 28 DGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 28 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
+...+.+.. |+|++..+. +...+. ..|+|||||.||+|.+++.+ .+++.+.+++.+|+||+.||+|||++||+||
T Consensus 69 Ei~~~~~~~~HpnI~~l~e-v~~t~~--~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HR 144 (370)
T KOG0583|consen 69 EISILRRLRSHPNIIRLLE-VFATPT--KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHR 144 (370)
T ss_pred HHHHHHHhccCCCEeEEEE-EEecCC--eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeC
Confidence 334445555 888888887 655443 48999999999999999977 5789999999999999999999999999999
Q ss_pred cCCCcceeeccC-CCeeeeecccccCCC-CCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 107 NVRPSCFVMSSF-NHVSFIESASCSDSG-SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 107 DlKP~NIll~~~-~~vkl~dfg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||+|||++.+ +.+||+|||++.... ...
T Consensus 145 DLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~------------------------------------------------ 176 (370)
T KOG0583|consen 145 DLKPENILLDGNEGNLKLSDFGLSAISPGEDG------------------------------------------------ 176 (370)
T ss_pred CCCHHHEEecCCCCCEEEeccccccccCCCCC------------------------------------------------
Confidence 999999999999 999999999997642 110
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-C-CccCcchhHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-V-SCASDIYRLGVLL 262 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~-~~~sDIwSlGvil 262 (879)
.....+||+.|+|||++.+.. | +.++||||+||+|
T Consensus 177 -------------------------------------------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViL 213 (370)
T KOG0583|consen 177 -------------------------------------------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVIL 213 (370)
T ss_pred -------------------------------------------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHH
Confidence 113469999999999999987 8 5899999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|.|++ ||...................|.+.. ++++..|+.+||..||.+|+|+.+++.||||+.
T Consensus 214 y~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 214 YVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 99999 99775544444444444443444433 799999999999999999999999999999996
No 25
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=318.71 Aligned_cols=216 Identities=20% Similarity=0.192 Sum_probs=171.0
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
++...+...+|+|+|..++..-..+. ...+|.|||+.||+|.+++++.+++|++..++.+.+||++||.|||++|||||
T Consensus 63 ~Ei~iL~~l~~p~IV~~~G~~~~~~~-~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~ 141 (313)
T KOG0198|consen 63 REIRILSRLNHPNIVQYYGSSSSREN-DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHC 141 (313)
T ss_pred HHHHHHHhCCCCCEEeeCCccccccC-eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecc
Confidence 33444566669999988872122221 35899999999999999997765589999999999999999999999999999
Q ss_pred cCCCcceeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 107 NVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 107 DlKP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
||||+|||++. ++.+||+|||+++........
T Consensus 142 DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~----------------------------------------------- 174 (313)
T KOG0198|consen 142 DIKPANILLDPSNGDVKLADFGLAKKLESKGTK----------------------------------------------- 174 (313)
T ss_pred CcccceEEEeCCCCeEEeccCcccccccccccc-----------------------------------------------
Confidence 99999999999 699999999999765320000
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 264 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~e 264 (879)
+.......||+.|||||++..+ ...+++|||||||++.|
T Consensus 175 ----------------------------------------~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvE 214 (313)
T KOG0198|consen 175 ----------------------------------------SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVE 214 (313)
T ss_pred ----------------------------------------ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEe
Confidence 0011235899999999999863 24469999999999999
Q ss_pred hhc---CCCC-ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 265 LFC---PFST-GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 265 ll~---pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
|+| ||.. ................|+.+...++++.+|+.+|+..||++||||.++|+|||+.....
T Consensus 215 M~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 215 MLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred ccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 999 6654 33444455555566566666678889999999999999999999999999999986443
No 26
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=5.8e-34 Score=286.20 Aligned_cols=289 Identities=20% Similarity=0.343 Sum_probs=249.7
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
+.+|.+.|.||++.|-.++|+||+.|++|+|||+.++... ....+|...|..+++++. ..++++++.|+.|+
T Consensus 147 i~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lk-------ltltGhi~~vr~vavS~r-HpYlFs~gedk~VK 218 (460)
T KOG0285|consen 147 ISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLK-------LTLTGHIETVRGVAVSKR-HPYLFSAGEDKQVK 218 (460)
T ss_pred hhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEE-------Eeecchhheeeeeeeccc-CceEEEecCCCeeE
Confidence 4599999999999999999999999999999999985332 222348889999999985 88999999999999
Q ss_pred EEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEEe
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 644 vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs 722 (879)
.||++..+.++.|.+|-..|.|++.+| .-..|++|+.|.+++|||+++...+..+. |...|++|.+.|. ...+++||
T Consensus 219 CwDLe~nkvIR~YhGHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~-dpqvit~S 296 (460)
T KOG0285|consen 219 CWDLEYNKVIRHYHGHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPT-DPQVITGS 296 (460)
T ss_pred EEechhhhhHHHhccccceeEEEeccc-cceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecC-CCceEEec
Confidence 999999999999999999999999999 78899999999999999999999999998 5677999999988 55789999
Q ss_pred CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEE
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGL 801 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 801 (879)
.|++|++||++.++. ..++..|+..|.+++.+ ....++|+|.|+ |+.|++..+ ..+..+.+|...+++++.
T Consensus 297 ~D~tvrlWDl~agkt-~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g------~f~~nlsgh~~iintl~~ 368 (460)
T KOG0285|consen 297 HDSTVRLWDLRAGKT-MITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEG------EFLQNLSGHNAIINTLSV 368 (460)
T ss_pred CCceEEEeeeccCce-eEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCcc------chhhccccccceeeeeee
Confidence 999999999999995 88888999999999998 777888888876 999999987 566779999999999988
Q ss_pred ecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 802 SVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 802 sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
..| .++++|+++|.+.+||.+++..-+... .+.+.-.-.....|.+.||...+. .|++|..|.+|++|.
T Consensus 369 nsD-~v~~~G~dng~~~fwdwksg~nyQ~~~-----t~vqpGSl~sEagI~as~fDktg~-rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 369 NSD-GVLVSGGDNGSIMFWDWKSGHNYQRGQ-----TIVQPGSLESEAGIFASCFDKTGS-RLITGEADKTIKMYK 437 (460)
T ss_pred ccC-ceEEEcCCceEEEEEecCcCccccccc-----ccccCCccccccceeEEeecccCc-eEEeccCCcceEEEe
Confidence 754 578899999999999999875443321 111111123345699999999999 999999999999996
No 27
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=5.3e-33 Score=270.62 Aligned_cols=292 Identities=23% Similarity=0.357 Sum_probs=238.2
Q ss_pred cccCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 563 DLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspd-g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
.+.+|.+.|..++|+|- |..|||||.|+.|+||+.... .......++.-.|+..|.+++|+|. +++|+++++|.+
T Consensus 9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~---~s~~ck~vld~~hkrsVRsvAwsp~-g~~La~aSFD~t 84 (312)
T KOG0645|consen 9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSG---DSWTCKTVLDDGHKRSVRSVAWSPH-GRYLASASFDAT 84 (312)
T ss_pred eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCC---CcEEEEEeccccchheeeeeeecCC-CcEEEEeeccce
Confidence 35589999999999997 899999999999999998741 1122223344468999999999995 899999999999
Q ss_pred EEEEEcCC--CeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC---ceEEEEec-CCceEEEEeeCCCC
Q 002801 642 VQVWDVSR--SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG---VSIGTIKT-KANVCCVQFPLDSG 715 (879)
Q Consensus 642 V~vwd~~~--~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~---~~i~~~~~-~~~v~~v~~~p~~~ 715 (879)
+.||.-.. .+++..+.+|+..|-|++|++ +|++||++|.|.+|.||.+..+ .++..++. ...|-.|.|||. .
T Consensus 85 ~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt-~ 162 (312)
T KOG0645|consen 85 VVIWKKEDGEFECVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPT-E 162 (312)
T ss_pred EEEeecCCCceeEEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCC-c
Confidence 99998654 368899999999999999999 9999999999999999999754 45666664 456999999998 7
Q ss_pred CEEEEEeCCCeEEEEEcCCCc--eeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCC
Q 002801 716 RSLAFGSADHRIYYYDLRNSK--IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 792 (879)
Q Consensus 716 ~~l~tgs~d~~I~iwDl~~~~--~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h 792 (879)
.+|+++|.|.+|++|+-.... ..+.++.+|...|.++.|. .|..|++++.|++++||-.... +. .-|
T Consensus 163 dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~--------~~--~~~ 232 (312)
T KOG0645|consen 163 DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD--------LS--GMH 232 (312)
T ss_pred ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC--------cc--hhc
Confidence 899999999999999876322 4588899999999999999 8999999999999999986643 11 127
Q ss_pred CCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCc
Q 002801 793 TNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGN 872 (879)
Q Consensus 793 ~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~ 872 (879)
...++.|.|. ...||++++|+.|++|.....-.--.++ +.......|..-|++|+|+|...+.|++|+.||.
T Consensus 233 sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~------l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~ 304 (312)
T KOG0645|consen 233 SRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWN------LLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGI 304 (312)
T ss_pred ccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHH------HHHhhhcccccccceEEEcCCCCCceeecCCCce
Confidence 7889999998 6789999999999999876321111111 1111225788899999999974448999999999
Q ss_pred EEEEEe
Q 002801 873 IKILEM 878 (879)
Q Consensus 873 I~vw~l 878 (879)
|++|++
T Consensus 305 v~~W~l 310 (312)
T KOG0645|consen 305 VNFWEL 310 (312)
T ss_pred EEEEEe
Confidence 999986
No 28
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-36 Score=322.64 Aligned_cols=209 Identities=17% Similarity=0.215 Sum_probs=170.3
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
.+.+.+....|+|+|.++..+-.. ..+++||||++||+|.+.+... .+++.++..|+++++.||.|||.+|||||
T Consensus 319 nEi~Vm~~~~H~NiVnfl~Sylv~---deLWVVMEym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~gIiHr 393 (550)
T KOG0578|consen 319 NEILVMRDLHHPNIVNFLDSYLVG---DELWVVMEYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARGIIHR 393 (550)
T ss_pred HHHHHHHhccchHHHHHHHHhccc---ceeEEEEeecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcceeee
Confidence 344455567788888877744433 5689999999999999999554 48999999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
|||.+|||++.+|.+||+|||+|..+.....
T Consensus 394 DIKSDnILL~~~g~vKltDFGFcaqi~~~~~------------------------------------------------- 424 (550)
T KOG0578|consen 394 DIKSDNILLTMDGSVKLTDFGFCAQISEEQS------------------------------------------------- 424 (550)
T ss_pred ccccceeEeccCCcEEEeeeeeeeccccccC-------------------------------------------------
Confidence 9999999999999999999999987532200
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell 266 (879)
+....+|||+|||||++....|++++||||||++++||+
T Consensus 425 -----------------------------------------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMv 463 (550)
T KOG0578|consen 425 -----------------------------------------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMV 463 (550)
T ss_pred -----------------------------------------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHh
Confidence 234579999999999999999999999999999999999
Q ss_pred c---CCCCChhhHhHHhhhcc-cCC-CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 267 C---PFSTGEEKTRTMSSLRH-RVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
- ||..+... .++..+.. +.. -......++.+++|+.+||+.||.+|+++.|+|+||||+....+
T Consensus 464 eGEPPYlnE~Pl-rAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ 532 (550)
T KOG0578|consen 464 EGEPPYLNENPL-RALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPE 532 (550)
T ss_pred cCCCCccCCChH-HHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCH
Confidence 9 77764444 34433333 222 23445678999999999999999999999999999999654333
No 29
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=5.3e-34 Score=314.79 Aligned_cols=251 Identities=20% Similarity=0.339 Sum_probs=226.2
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCccc----------CcC--------------cccccceEEeccCCCee
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII----------NEN--------------RDIHYPVVEMASRSKLS 621 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~----------~~~--------------~~~~~~~~~~~~~~~i~ 621 (879)
+....|+|+.|++|+.+||.|-.|..|++|.+.... ... ..........+|.++|.
T Consensus 376 nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVy 455 (707)
T KOG0263|consen 376 NTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVY 455 (707)
T ss_pred EcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCcee
Confidence 345689999999999999999999999999987310 000 00011223568999999
Q ss_pred EEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec
Q 002801 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT 701 (879)
Q Consensus 622 ~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~ 701 (879)
.+.|+|. .++|++|+.|++|++|.+.+..++-.+++|..+||.+.|+| -|-+|||+|.|++.++|.....++++.+..
T Consensus 456 g~sFsPd-~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P-~GyYFatas~D~tArLWs~d~~~PlRifag 533 (707)
T KOG0263|consen 456 GCSFSPD-RRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAP-RGYYFATASHDQTARLWSTDHNKPLRIFAG 533 (707)
T ss_pred eeeeccc-ccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecC-CceEEEecCCCceeeeeecccCCchhhhcc
Confidence 9999995 99999999999999999999999999999999999999999 899999999999999999999999988875
Q ss_pred -CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcc
Q 002801 702 -KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTS 779 (879)
Q Consensus 702 -~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~ 779 (879)
-+.|.|++|||+ .+|+++||.|.+|++||+.++.. +..|.||.++|++|+|+ +|.+|+||+.|+.|++||+.++
T Consensus 534 hlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~-VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~-- 609 (707)
T KOG0263|consen 534 HLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNS-VRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANG-- 609 (707)
T ss_pred cccccceEEECCc-ccccccCCCCceEEEEEcCCCcE-EEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCC--
Confidence 467999999999 89999999999999999999985 99999999999999999 9999999999999999999997
Q ss_pred cccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCC
Q 002801 780 RVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPM 826 (879)
Q Consensus 780 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~ 826 (879)
..+..+.+|++.|+++.||.+|..||+||.|++|++||+....
T Consensus 610 ----~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 610 ----SLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVI 652 (707)
T ss_pred ----cchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhc
Confidence 7889999999999999999999999999999999999987543
No 30
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.4e-36 Score=298.99 Aligned_cols=227 Identities=16% Similarity=0.227 Sum_probs=169.3
Q ss_pred cccccccccC-CCC-Ccccccc--cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChh
Q 002801 7 RGERFGVRGD-DSN-DFELRKH--SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~-~~~-~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~ 82 (879)
.|+.++++.- ++. +...++. |+...+....|+|.|.... ||. -...+++|.|||+..-|.+ |.+....++..
T Consensus 26 TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiE-VFr--rkrklhLVFE~~dhTvL~e-Le~~p~G~~~~ 101 (396)
T KOG0593|consen 26 TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIE-VFR--RKRKLHLVFEYCDHTVLHE-LERYPNGVPSE 101 (396)
T ss_pred cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHH-HHH--hcceeEEEeeecchHHHHH-HHhccCCCCHH
Confidence 3555665432 222 2333332 4555556667777777666 553 3557899999997655544 54555668999
Q ss_pred HHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhh
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
.++.|++|++.|+.|+|++++|||||||+||||+.+|.+|+||||.|+.+..+..
T Consensus 102 ~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd------------------------- 156 (396)
T KOG0593|consen 102 LVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD------------------------- 156 (396)
T ss_pred HHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcc-------------------------
Confidence 9999999999999999999999999999999999999999999999988632200
Q ss_pred hhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccc
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
..|.++-|.||+|||
T Consensus 157 -----------------------------------------------------------------~YTDYVATRWYRaPE 171 (396)
T KOG0593|consen 157 -----------------------------------------------------------------NYTDYVATRWYRAPE 171 (396)
T ss_pred -----------------------------------------------------------------hhhhhhhhhhccChh
Confidence 125678899999999
Q ss_pred cccC-CCCCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhccc--------------------C-CC---------c
Q 002801 243 ELAG-APVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR--------------------V-LP---------P 289 (879)
Q Consensus 243 ~~~~-~~~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~~~--------------------~-~~---------~ 289 (879)
.+.| .+|+.++||||+||++.||++ |++++.........++.. . +| .
T Consensus 172 LLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~ 251 (396)
T KOG0593|consen 172 LLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLER 251 (396)
T ss_pred hhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhh
Confidence 9998 569999999999999999999 877766554443332210 0 01 1
Q ss_pred hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 290 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
..+..+..+.+|+.+||+.||.+|++.+|+|.||||+.
T Consensus 252 k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 252 KYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred hcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 12233445679999999999999999999999999954
No 31
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=311.52 Aligned_cols=228 Identities=14% Similarity=0.181 Sum_probs=178.3
Q ss_pred cccccccccCCCC--Cccccc--ccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChh
Q 002801 7 RGERFGVRGDDSN--DFELRK--HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~~~~--~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~ 82 (879)
.|.+++++.-... ...-++ +.+...+...+|+|+|++++ .+. .....|||||||.||+|.+||++. +.+++.
T Consensus 34 ~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d-~~~--~~~~i~lVMEyC~gGDLs~yi~~~-~~l~e~ 109 (429)
T KOG0595|consen 34 SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLD-CIE--DDDFIYLVMEYCNGGDLSDYIRRR-GRLPEA 109 (429)
T ss_pred CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEE-EEe--cCCeEEEEEEeCCCCCHHHHHHHc-CCCCHH
Confidence 3455555544433 333344 45666677788999999998 443 344789999999999999999665 578999
Q ss_pred HHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccC------CCeeeeecccccCCCCCCcccccccccccccCCCCCCc
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLP 156 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~------~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (879)
.+++++.||+.||++||+++||||||||+||||+.. -.+||+|||+|+.+.....
T Consensus 110 t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~------------------- 170 (429)
T KOG0595|consen 110 TARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSM------------------- 170 (429)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhH-------------------
Confidence 999999999999999999999999999999999864 3589999999988632211
Q ss_pred chhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccccccc
Q 002801 157 LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236 (879)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~ 236 (879)
....||++
T Consensus 171 ------------------------------------------------------------------------a~tlcGSp 178 (429)
T KOG0595|consen 171 ------------------------------------------------------------------------AETLCGSP 178 (429)
T ss_pred ------------------------------------------------------------------------HHHhhCCc
Confidence 13369999
Q ss_pred ceeccccccCCCCCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCC
Q 002801 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 237 ~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
.|||||+++...|+.|+|+||+|+|||+|++ |++...........++.+ ..+......++.+.+|+...|..+|.+
T Consensus 179 lYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~ 258 (429)
T KOG0595|consen 179 LYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKD 258 (429)
T ss_pred cccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccc
Confidence 9999999999999999999999999999999 433444444444444432 233344455667779999999999999
Q ss_pred CCCHHHHhhcccccCCc
Q 002801 313 RPKMGELLQSEFLNEPR 329 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~~ 329 (879)
|.+..+.+.|+++....
T Consensus 259 ~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 259 RISFEDFFDHPFLAANP 275 (429)
T ss_pred cCchHHhhhhhhcccCc
Confidence 99999999999998654
No 32
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.3e-33 Score=293.53 Aligned_cols=287 Identities=18% Similarity=0.326 Sum_probs=249.7
Q ss_pred CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEecCcccC--cCc-ccccce----EEeccCCCeeEEEEeCCCCCeEEEee
Q 002801 566 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIIN--ENR-DIHYPV----VEMASRSKLSSICWNSYIKSQIASSN 637 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~-~lat~~~dg~I~iwd~~~~~~--~~~-~~~~~~----~~~~~~~~i~~l~~~~~~~~~l~s~~ 637 (879)
.|...|++++|+|-.. ++|+|+.|-+.++|++..... ... ....++ ........|++++|+.. ++.||+|.
T Consensus 176 ~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~-G~~LatG~ 254 (524)
T KOG0273|consen 176 RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNND-GTLLATGS 254 (524)
T ss_pred cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCC-CCeEEEee
Confidence 5899999999999655 999999999999999874111 110 111111 22234567999999984 99999999
Q ss_pred CCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCce-EEEEeeCCCCC
Q 002801 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANV-CCVQFPLDSGR 716 (879)
Q Consensus 638 ~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v-~~v~~~p~~~~ 716 (879)
+||.+++|+.. |..+.++..|.++|.++.|+. .|++|++++.|+++.|||..++...+.+..++.+ ..|.|-.+ .
T Consensus 255 ~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk-~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~--~ 330 (524)
T KOG0273|consen 255 EDGEARIWNKD-GNLISTLGQHKGPIFSLKWNK-KGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSN--D 330 (524)
T ss_pred cCcEEEEEecC-chhhhhhhccCCceEEEEEcC-CCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecC--c
Confidence 99999999985 777888999999999999999 9999999999999999999999999888876665 77999765 5
Q ss_pred EEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCc
Q 002801 717 SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNV 795 (879)
Q Consensus 717 ~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~ 795 (879)
.+++++.|+.|+++-+...+ |+.++.+|.+.|++++|+ .+.+|+|+|.|++++||+.... .+.+.+.+|..+
T Consensus 331 ~F~ts~td~~i~V~kv~~~~-P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~------~~~~~l~~Hske 403 (524)
T KOG0273|consen 331 EFATSSTDGCIHVCKVGEDR-PVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQS------NSVHDLQAHSKE 403 (524)
T ss_pred eEeecCCCceEEEEEecCCC-cceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCC------cchhhhhhhccc
Confidence 79999999999999998766 799999999999999999 9999999999999999998876 678999999999
Q ss_pred EEEEEEecCC---------CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEE
Q 002801 796 KNFVGLSVWD---------GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVA 866 (879)
Q Consensus 796 v~~v~~sp~~---------~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s 866 (879)
|+.+.|+|.| ..|++++.|++|++||+..+.++..+ ..|..+|.+|+|+|+|. ++|+
T Consensus 404 i~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f-------------~kH~~pVysvafS~~g~-ylAs 469 (524)
T KOG0273|consen 404 IYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTL-------------MKHQEPVYSVAFSPNGR-YLAS 469 (524)
T ss_pred eeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEee-------------ccCCCceEEEEecCCCc-EEEe
Confidence 9999999975 38999999999999999999988765 36889999999999999 9999
Q ss_pred EeCCCcEEEEEe
Q 002801 867 ANSSGNIKILEM 878 (879)
Q Consensus 867 ~~~Dg~I~vw~l 878 (879)
|+.||.|.||+.
T Consensus 470 Gs~dg~V~iws~ 481 (524)
T KOG0273|consen 470 GSLDGCVHIWST 481 (524)
T ss_pred cCCCCeeEeccc
Confidence 999999999973
No 33
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-36 Score=296.37 Aligned_cols=197 Identities=16% Similarity=0.169 Sum_probs=166.5
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
...||..+..+. .+.| ...+||||||++||.|+.+|++. +++++..++.|+.||+.||+|||+.+|++|||||+||
T Consensus 100 ~v~~PFlv~l~~-t~~d--~~~lymvmeyv~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENi 175 (355)
T KOG0616|consen 100 AVSHPFLVKLYG-TFKD--NSNLYMVMEYVPGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENL 175 (355)
T ss_pred hccCceeEEEEE-eecc--CCeEEEEEeccCCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHe
Confidence 345666666554 3433 45689999999999999999776 6799999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
||+.+|++||+|||.|+....
T Consensus 176 LlD~~G~iKitDFGFAK~v~~----------------------------------------------------------- 196 (355)
T KOG0616|consen 176 LLDQNGHIKITDFGFAKRVSG----------------------------------------------------------- 196 (355)
T ss_pred eeccCCcEEEEeccceEEecC-----------------------------------------------------------
Confidence 999999999999999976411
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
+.-..||||-|+|||++...+|+.++|.|||||++|||++ ||+
T Consensus 197 ----------------------------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~ 242 (355)
T KOG0616|consen 197 ----------------------------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFY 242 (355)
T ss_pred ----------------------------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCc
Confidence 1234799999999999999999999999999999999999 888
Q ss_pred CChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCC-----CCHHHHhhcccccCCc
Q 002801 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR-----PKMGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R-----pt~~evl~hp~~~~~~ 329 (879)
..........++......|. -.++.+++|+.++|+.|-.+| ....+|..||||++..
T Consensus 243 ~~~~~~iY~KI~~~~v~fP~--~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 243 DDNPIQIYEKILEGKVKFPS--YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred CCChHHHHHHHHhCcccCCc--ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 88776666666666554444 234889999999999999999 4568999999999754
No 34
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=318.08 Aligned_cols=259 Identities=14% Similarity=0.165 Sum_probs=175.9
Q ss_pred cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 21 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.+.|.||+++.- .+.+.+|..|+ .+.| ...+||||||++||++..+|.+. +.|++.+++.|+.+++.|++.+|.
T Consensus 186 ~hV~aERdiL~~--~ds~~vVKLyY-sFQD--~~~LYLiMEylPGGD~mTLL~~~-~~L~e~~arfYiaE~vlAI~~iH~ 259 (550)
T KOG0605|consen 186 EHVRAERDILAE--VDSPWVVKLYY-SFQD--KEYLYLIMEYLPGGDMMTLLMRK-DTLTEDWARFYIAETVLAIESIHQ 259 (550)
T ss_pred HHHHHHHHHhhh--cCCCcEEEEEE-EecC--CCeeEEEEEecCCccHHHHHHhc-CcCchHHHHHHHHHHHHHHHHHHH
Confidence 345677775544 67778888777 4443 45789999999999999999655 689999999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
.|+|||||||+|+||+..|++||+|||+|.-+......+-. ... + .+..........++.....
T Consensus 260 ~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~-~~~-~----------~~~~~~~~~~~~~~~~~~~---- 323 (550)
T KOG0605|consen 260 LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESY-RLD-E----------QMQINLSEAKPSDFPKFNT---- 323 (550)
T ss_pred cCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhh-cch-h----------hhhhhhccCCCcccccccc----
Confidence 99999999999999999999999999999654322111000 000 0 0000000000001100000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhc--ccccCCCCccccccccccceeccccccCCCCCccCcchhH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV--EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (879)
..+ ..+...-..+- ..+... ...+|||-|||||++.+.+|+..+|+|||
T Consensus 324 -------~~~-----------------~~~~~~~~~~w~~nrr~~a-----~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 324 -------PRS-----------------TMSRREQLQTWKRNRRQLA-----YSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred -------ccc-----------------hhhHHHHHHHHHhhhhhhh-----hcccCCccccchHHHhcCCCCccccHHHH
Confidence 000 00000000000 011111 23699999999999999999999999999
Q ss_pred HHHHHHhhc---CCCCChhhHhHHhhhcc---cCCCchhhccChhhHHHHHHhcCCCCCCCC---CHHHHhhcccccCCc
Q 002801 259 GVLLFELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPR 329 (879)
Q Consensus 259 Gvil~ell~---pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~evl~hp~~~~~~ 329 (879)
|||+||||. ||.+... ......+.. ....|.-...++++.+||.+||. ||.+|. +++||.+||||+.+.
T Consensus 375 G~ImyEmLvGyPPF~s~tp-~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETP-QETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence 999999999 6655444 444443332 23345555667899999999999 999995 589999999999876
Q ss_pred Cch
Q 002801 330 DSM 332 (879)
Q Consensus 330 ~~~ 332 (879)
...
T Consensus 453 W~~ 455 (550)
T KOG0605|consen 453 WDH 455 (550)
T ss_pred cch
Confidence 543
No 35
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=2e-32 Score=287.90 Aligned_cols=310 Identities=22% Similarity=0.333 Sum_probs=254.1
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
++...||.+.++|-.+++.+..+...+ +|.+.|++|+|+||+..|+|++.|+++||||+.+...... ..+..
T Consensus 206 at~gsDgki~iyDGktge~vg~l~~~~--aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t------~~~~~ 277 (603)
T KOG0318|consen 206 ATAGSDGKIYIYDGKTGEKVGELEDSD--AHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVST------WPMGS 277 (603)
T ss_pred EEecCCccEEEEcCCCccEEEEecCCC--CccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEE------eecCC
Confidence 888889999999999999998887644 8999999999999999999999999999999987422111 11111
Q ss_pred C--CCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc
Q 002801 617 R--SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV 694 (879)
Q Consensus 617 ~--~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~ 694 (879)
. ...-.+-|- +..|++.+.+|++.+++......+..+.+|.+.|+++..+| ++++|.+|+.||.|.-||..++.
T Consensus 278 ~v~dqqvG~lWq---kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~-d~~~i~SgsyDG~I~~W~~~~g~ 353 (603)
T KOG0318|consen 278 TVEDQQVGCLWQ---KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSP-DGKTIYSGSYDGHINSWDSGSGT 353 (603)
T ss_pred chhceEEEEEEe---CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcC-CCCEEEeeccCceEEEEecCCcc
Confidence 1 223344564 78899999999999999999999999999999999999999 89999999999999999975421
Q ss_pred eE-------------------------------EEE------------------------------------------e-
Q 002801 695 SI-------------------------------GTI------------------------------------------K- 700 (879)
Q Consensus 695 ~i-------------------------------~~~------------------------------------------~- 700 (879)
.- +.+ +
T Consensus 354 ~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~ 433 (603)
T KOG0318|consen 354 SDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQD 433 (603)
T ss_pred ccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEec
Confidence 00 000 0
Q ss_pred --------cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc-eeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEE
Q 002801 701 --------TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLK 770 (879)
Q Consensus 701 --------~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~-~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~ 770 (879)
..-...+++++|+ +..+++|+.|+.|++|.+.... .....+..|+.+|++|+|+ |+.+||++...+++.
T Consensus 434 ~~~~~~~~~~y~~s~vAv~~~-~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv 512 (603)
T KOG0318|consen 434 QTKVSSIPIGYESSAVAVSPD-GSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVV 512 (603)
T ss_pred CCcceeeccccccceEEEcCC-CCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEE
Confidence 0012567788998 8899999999999999998754 4455677899999999999 999999999999999
Q ss_pred EEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002801 771 LWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF 850 (879)
Q Consensus 771 lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 850 (879)
+||+.+... ......-|+..|++|+|+|++.++||||.|-.|.||+++.+.....++ ..|...
T Consensus 513 ~yd~~s~~~-----~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~ik------------nAH~~g 575 (603)
T KOG0318|consen 513 LYDVASREV-----KTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIK------------NAHLGG 575 (603)
T ss_pred EEEcccCce-----ecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEec------------cccccC
Confidence 999998732 223344599999999999999999999999999999998765443332 567777
Q ss_pred EEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 851 ISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 851 V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
|+.|.|-.+. +|+++|.|..||+|.+
T Consensus 576 Vn~v~wlde~--tvvSsG~Da~iK~W~v 601 (603)
T KOG0318|consen 576 VNSVAWLDES--TVVSSGQDANIKVWNV 601 (603)
T ss_pred ceeEEEecCc--eEEeccCcceeEEecc
Confidence 9999997655 5999999999999986
No 36
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-35 Score=313.98 Aligned_cols=236 Identities=18% Similarity=0.195 Sum_probs=184.3
Q ss_pred ccccccccccccCC--CCCccc-cc-ccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCC
Q 002801 4 RLLRGERFGVRGDD--SNDFEL-RK-HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 79 (879)
Q Consensus 4 ~~~~~~~~~~~~~~--~~~~~~-r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l 79 (879)
++..|+.++++... ....+| +. .|++..+.+.+|+|++.+-+ ...+.....+|||.||| .-+|.-++..+.-.|
T Consensus 138 ~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~e-ivt~~~~~siYlVFeYM-dhDL~GLl~~p~vkf 215 (560)
T KOG0600|consen 138 DLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEE-IVTSKLSGSIYLVFEYM-DHDLSGLLSSPGVKF 215 (560)
T ss_pred ecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceee-EEEecCCceEEEEEecc-cchhhhhhcCCCccc
Confidence 45667777775432 223444 22 36777788899999998777 44555566899999999 558999998877789
Q ss_pred ChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchh
Q 002801 80 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (879)
Q Consensus 80 ~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (879)
++.++++|++||+.||+|||++||+|||||.+||||+.+|.+||+|||+|+.+......
T Consensus 216 t~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~--------------------- 274 (560)
T KOG0600|consen 216 TEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA--------------------- 274 (560)
T ss_pred ChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCc---------------------
Confidence 99999999999999999999999999999999999999999999999999875332111
Q ss_pred hhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccccccccee
Q 002801 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (879)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (879)
..|..+-|.||+
T Consensus 275 --------------------------------------------------------------------~~T~rVvTLWYR 286 (560)
T KOG0600|consen 275 --------------------------------------------------------------------PYTSRVVTLWYR 286 (560)
T ss_pred --------------------------------------------------------------------ccccceEEeecc
Confidence 125567899999
Q ss_pred ccccccCCC-CCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhcc---c---------CCC----------------
Q 002801 240 SPEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRH---R---------VLP---------------- 288 (879)
Q Consensus 240 aPE~~~~~~-~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~~---~---------~~~---------------- 288 (879)
|||++.|.. |+.++|+||.||||.||+. |.+.+......+..+-+ . .+|
T Consensus 287 pPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~ 366 (560)
T KOG0600|consen 287 PPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLR 366 (560)
T ss_pred ChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHH
Confidence 999999976 9999999999999999999 77666555544433321 1 011
Q ss_pred chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 289 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
..+...++.+.+|+..||..||.+|.||.++|+|+||.....
T Consensus 367 E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~ 408 (560)
T KOG0600|consen 367 ETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPL 408 (560)
T ss_pred HHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCC
Confidence 112334566789999999999999999999999999965443
No 37
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=284.28 Aligned_cols=198 Identities=20% Similarity=0.212 Sum_probs=160.0
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
...||+++.....+. .....|||.|+++|++|..-|-+. ..+++..+-++++||+++|+|+|.+||||||+||.|+
T Consensus 66 ~LqHP~IvrL~~ti~---~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nl 141 (355)
T KOG0033|consen 66 KLQHPNIVRLHDSIQ---EESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENL 141 (355)
T ss_pred hcCCCcEeehhhhhc---ccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhhe
Confidence 356666666555222 233579999999999998766332 4579999999999999999999999999999999999
Q ss_pred eecc---CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 114 VMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 114 ll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
||.. ..-+|++|||+|.+.+....
T Consensus 142 lLASK~~~A~vKL~~FGvAi~l~~g~~----------------------------------------------------- 168 (355)
T KOG0033|consen 142 LLASKAKGAAVKLADFGLAIEVNDGEA----------------------------------------------------- 168 (355)
T ss_pred eeeeccCCCceeecccceEEEeCCccc-----------------------------------------------------
Confidence 9953 34589999999987641111
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....+|||.|||||++...+|+.++|||+.|||||-||.
T Consensus 169 --------------------------------------~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~ 210 (355)
T KOG0033|consen 169 --------------------------------------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 210 (355)
T ss_pred --------------------------------------cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCC
Confidence 123589999999999999999999999999999999998
Q ss_pred CCCCChhhHhHHhhhccc---CCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
||...... +....+..+ ..+|.+...++.+++|+++||..||++|+|+.|+|.|||+.+
T Consensus 211 PF~~~~~~-rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 211 PFWDEDQH-RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred CCCCccHH-HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 77654444 444444433 345688899999999999999999999999999999999975
No 38
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-35 Score=317.44 Aligned_cols=223 Identities=19% Similarity=0.219 Sum_probs=180.0
Q ss_pred cccccc-cccccCCCC------CcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CC
Q 002801 5 LLRGER-FGVRGDDSN------DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PK 76 (879)
Q Consensus 5 ~~~~~~-~~~~~~~~~------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~ 76 (879)
.++|.. ++++--... ...|+.|.. .+...+|+|+|.+++ +|.++.. ...|||||+++|+|.++|.+ ..
T Consensus 61 ~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~--il~~l~HpNIV~f~G-~~~~~~~-~~~iVtEy~~~GsL~~~l~~~~~ 136 (362)
T KOG0192|consen 61 KWRGTDVVAVKIISDPDFDDESRKAFRREAS--LLSRLRHPNIVQFYG-ACTSPPG-SLCIVTEYMPGGSLSVLLHKKRK 136 (362)
T ss_pred EeCCceeEEEEEecchhcChHHHHHHHHHHH--HHHhCCCCCeeeEEE-EEcCCCC-ceEEEEEeCCCCcHHHHHhhccc
Confidence 456777 666533221 124555544 455689999999666 8876543 57899999999999999966 46
Q ss_pred CCCChhHHHHHHHHHHHHHHhhhhcC-cccccCCCcceeeccCC-CeeeeecccccCCCCCCcccccccccccccCCCCC
Q 002801 77 RSVDVYECLHIFRQIVEIVYAAHSQG-IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 154 (879)
Q Consensus 77 ~~l~~~~~~~i~~qi~~~l~~lHs~g-ivHrDlKP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (879)
+.+++..++.++.||++||+|||+++ ||||||||+|||++..+ ++||+|||+++......
T Consensus 137 ~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~------------------ 198 (362)
T KOG0192|consen 137 RKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK------------------ 198 (362)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc------------------
Confidence 78999999999999999999999999 99999999999999997 99999999997631110
Q ss_pred CcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccccc
Q 002801 155 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 234 (879)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g 234 (879)
...+...|
T Consensus 199 ------------------------------------------------------------------------~~~~~~~G 206 (362)
T KOG0192|consen 199 ------------------------------------------------------------------------TSMTSVAG 206 (362)
T ss_pred ------------------------------------------------------------------------ccccCCCC
Confidence 01133589
Q ss_pred ccceecccccc--CCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCC
Q 002801 235 TNWYASPEELA--GAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPE 309 (879)
Q Consensus 235 t~~Y~aPE~~~--~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (879)
|+.|||||++. ...|+.++|||||||+||||+| ||..................|+.+..+++.+..|+.+||+.|
T Consensus 207 T~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~d 286 (362)
T KOG0192|consen 207 TYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVD 286 (362)
T ss_pred CccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCC
Confidence 99999999999 5589999999999999999999 998877744555555566677766678899999999999999
Q ss_pred CCCCCCHHHHhh
Q 002801 310 PSGRPKMGELLQ 321 (879)
Q Consensus 310 P~~Rpt~~evl~ 321 (879)
|..||++.+++.
T Consensus 287 p~~RP~f~ei~~ 298 (362)
T KOG0192|consen 287 PSRRPSFLEIVS 298 (362)
T ss_pred CCcCCCHHHHHH
Confidence 999999998865
No 39
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=300.47 Aligned_cols=272 Identities=15% Similarity=0.134 Sum_probs=189.0
Q ss_pred ccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhh-cCCCCCCChhHHHHHHHHHHHHHHhhhhcC
Q 002801 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 24 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l-~~~~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
|.+.+...|+..+||=...+|. .. +.....+++||||.||+|..++ +++++.+++..++.|+.+|+.||+|||-.|
T Consensus 123 Ra~tE~eIL~~lDHPFlPTLYa-~f--et~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG 199 (459)
T KOG0610|consen 123 RAQTEREILSLLDHPFLPTLYA-SF--ETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG 199 (459)
T ss_pred HHHHHHHHHHhcCCCccchhhh-ee--eccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc
Confidence 4556666677889988888777 33 3445679999999999999988 455678999999999999999999999999
Q ss_pred cccccCCCcceeeccCCCeeeeecccccCCCCC-CcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD-SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 103 ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||.|||||+||||-++|++.|+||-++...... ..-...+.. .....+++.. ....-|.+....
T Consensus 200 ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~-~~~~~~~~~~----------~~~s~f~~r~~~---- 264 (459)
T KOG0610|consen 200 IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPR-SSGSQPSCRS----------RQPSCFSPRCLS---- 264 (459)
T ss_pred eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCC-CCCCCccccc----------ccccccccchhc----
Confidence 999999999999999999999999998775221 000000000 0000000000 000000000000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
....... .. .... +...+... -+...+...++||-.|.|||++.|..-+.++|+|+|||+
T Consensus 265 ~~~~~~k-~~---------------~~~~-~~~p~~~a---ep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIf 324 (459)
T KOG0610|consen 265 SSKKRKK-KD---------------ESAS-RSLPELVA---EPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIF 324 (459)
T ss_pred ccccccc-cc---------------cccc-ccchhhhc---CCCCccccccccccccccceeeecCCCCchhhHHHHHHH
Confidence 0000000 00 0000 00000000 001123456899999999999999999999999999999
Q ss_pred HHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC----HHHHhhcccccCCcCchH
Q 002801 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRDSME 333 (879)
Q Consensus 262 l~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~evl~hp~~~~~~~~~~ 333 (879)
|||||. ||.+..........+.+....|.....+..+++||+++|.+||.+|.. +.||.+||||.+++..+.
T Consensus 325 lYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 325 LYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred HHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence 999998 998888877777777776665665577788999999999999999988 999999999999877644
No 40
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=8.1e-32 Score=293.78 Aligned_cols=321 Identities=19% Similarity=0.345 Sum_probs=275.2
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCC-CcEEEEecCcccCcCcccccceE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECDAIINENRDIHYPVV 612 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~d-g~I~iwd~~~~~~~~~~~~~~~~ 612 (879)
.-++++|..|...++.+..+.++..+.-++ ..|..++|+..|+.||.|+.. |.+-||++++. .+-..
T Consensus 278 ~~lvvgFssG~f~LyelP~f~lih~LSis~-----~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsE-------sYVlK 345 (893)
T KOG0291|consen 278 NLLVVGFSSGEFGLYELPDFNLIHSLSISD-----QKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSE-------SYVLK 345 (893)
T ss_pred eEEEEEecCCeeEEEecCCceEEEEeeccc-----ceeeEEEecccCCEEEEcCCccceEEEEEeecc-------ceeee
Confidence 345899999999999999999998887544 589999999999999998765 89999999862 22233
Q ss_pred EeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 002801 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (879)
Q Consensus 613 ~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~ 692 (879)
..+|...++|++++| +++.||+|+.||.|+|||...+-|+.+|.+|+..|+.+.|+. .++.+++.|-||+|+.||+..
T Consensus 346 QQgH~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~-~g~~llssSLDGtVRAwDlkR 423 (893)
T KOG0291|consen 346 QQGHSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTA-RGNVLLSSSLDGTVRAWDLKR 423 (893)
T ss_pred ccccccceeeEEECC-CCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEe-cCCEEEEeecCCeEEeeeecc
Confidence 446888999999999 599999999999999999999999999999999999999998 999999999999999999999
Q ss_pred CceEEEEecCCc--eEEEEeeCCCCCEEEEEeCCC-eEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCc
Q 002801 693 GVSIGTIKTKAN--VCCVQFPLDSGRSLAFGSADH-RIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNT 768 (879)
Q Consensus 693 ~~~i~~~~~~~~--v~~v~~~p~~~~~l~tgs~d~-~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~ 768 (879)
....+++..+.+ ..||+.+|. |.+++.|+.|. .|++|++.+++. +-.+.||.++|.++.|+ .+..|+|+|.|++
T Consensus 424 YrNfRTft~P~p~QfscvavD~s-GelV~AG~~d~F~IfvWS~qTGql-lDiLsGHEgPVs~l~f~~~~~~LaS~SWDkT 501 (893)
T KOG0291|consen 424 YRNFRTFTSPEPIQFSCVAVDPS-GELVCAGAQDSFEIFVWSVQTGQL-LDILSGHEGPVSGLSFSPDGSLLASGSWDKT 501 (893)
T ss_pred cceeeeecCCCceeeeEEEEcCC-CCEEEeeccceEEEEEEEeecCee-eehhcCCCCcceeeEEccccCeEEeccccce
Confidence 999999987655 789999998 88888888887 899999999995 88999999999999999 9999999999999
Q ss_pred EEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCC----C
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPE----T 844 (879)
Q Consensus 769 i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~----~ 844 (879)
||+||+-... ..+.++. +...+..++|+|+|+-||.+.-||.|.+||.....++.++..-. +...|.. +
T Consensus 502 VRiW~if~s~-----~~vEtl~-i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~Idgrk-D~~~gR~~~D~~ 574 (893)
T KOG0291|consen 502 VRIWDIFSSS-----GTVETLE-IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRK-DLSGGRKETDRI 574 (893)
T ss_pred EEEEEeeccC-----ceeeeEe-eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchh-hcccccccccee
Confidence 9999997652 2344444 56779999999999999999999999999999888776654221 1111111 1
Q ss_pred ----CCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 845 ----DDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 845 ----~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
...+.+.+.+|+++||. .+++||....|++|++
T Consensus 575 ta~~sa~~K~Ftti~ySaDG~-~IlAgG~sn~iCiY~v 611 (893)
T KOG0291|consen 575 TAENSAKGKTFTTICYSADGK-CILAGGESNSICIYDV 611 (893)
T ss_pred ehhhcccCCceEEEEEcCCCC-EEEecCCcccEEEEEC
Confidence 22357899999999999 9999999999999986
No 41
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.8e-33 Score=269.02 Aligned_cols=282 Identities=19% Similarity=0.341 Sum_probs=239.6
Q ss_pred EEEEEcC--CCCEEEEEe-------CCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 572 CSLSFDR--DGELFAAAG-------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 572 ~~l~fsp--dg~~lat~~-------~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
.++.||| +++ ||.+. ..|++.|-++... ........+.....+..++|+++..+.+++++.||++
T Consensus 12 ysvqfSPf~~nr-LavAt~q~yGl~G~G~L~ile~~~~-----~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSL 85 (311)
T KOG0277|consen 12 YSVQFSPFVENR-LAVATAQHYGLAGNGRLFILEVTDP-----KGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSL 85 (311)
T ss_pred ceeEecccccch-hheeehhhcccccCceEEEEecCCC-----CCeEEEEeeecccceeEeeecCCCcceEEEEecCceE
Confidence 4688998 444 33332 3578888887521 1122334455677899999999999999999999999
Q ss_pred EEEEcCC-CeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCC-ceEEEEeeCCCCCEEEE
Q 002801 643 QVWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 643 ~vwd~~~-~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~-~v~~v~~~p~~~~~l~t 720 (879)
++||... ..++..+++|...|.+++|++.....++++|-|++||+||..-++.++++..+. .|..++|+|..++++++
T Consensus 86 rl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas 165 (311)
T KOG0277|consen 86 RLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFAS 165 (311)
T ss_pred EEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEE
Confidence 9999643 467889999999999999999888999999999999999999999999998654 49999999999999999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEE
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNF 798 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~ 798 (879)
+|.|+++++||+|...+.+ .+..|...+.++.|+ +...|+||+.|+.|+.||+++. ..++..+.+|.-.|..
T Consensus 166 ~Sgd~~l~lwdvr~~gk~~-~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~-----r~pl~eL~gh~~AVRk 239 (311)
T KOG0277|consen 166 ASGDGTLRLWDVRSPGKFM-SIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNL-----RTPLFELNGHGLAVRK 239 (311)
T ss_pred ccCCceEEEEEecCCCcee-EEEeccceeEeecccccCCcEEEecCCCceEEEEehhhc-----cccceeecCCceEEEE
Confidence 9999999999999987644 488999999999998 8999999999999999999997 4789999999999999
Q ss_pred EEEecCC-CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 799 VGLSVWD-GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 799 v~~sp~~-~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|.|||.. ..||++|.|-+++|||...+.... ...+.|++||..+.|++-.++.+|+++.|+.++||+
T Consensus 240 vk~Sph~~~lLaSasYDmT~riw~~~~~ds~~------------e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 240 VKFSPHHASLLASASYDMTVRIWDPERQDSAI------------ETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred EecCcchhhHhhhccccceEEecccccchhhh------------hhhhccceEEeccccccccCceeeecccccceeeec
Confidence 9999985 489999999999999987443221 112678999999999998766999999999999997
No 42
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.4e-35 Score=295.73 Aligned_cols=214 Identities=17% Similarity=0.204 Sum_probs=167.0
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
++-.+.+..|+|+|..-. +.....-.+.|||||||+ -+|..+|..-..+|...+++.++.|++.||.|||...|+|||
T Consensus 125 EIniLl~~~H~NIV~vkE-VVvG~~~d~iy~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRD 202 (419)
T KOG0663|consen 125 EINILLKARHPNIVEVKE-VVVGSNMDKIYIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRD 202 (419)
T ss_pred HHHHHHhcCCCCeeeeEE-EEeccccceeeeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecc
Confidence 333455666888876555 333334456999999994 589999977667899999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|+|++..|.+||+|||+|+.++.+-
T Consensus 203 LK~SNLLm~~~G~lKiaDFGLAR~ygsp~--------------------------------------------------- 231 (419)
T KOG0663|consen 203 LKTSNLLLSHKGILKIADFGLAREYGSPL--------------------------------------------------- 231 (419)
T ss_pred cchhheeeccCCcEEecccchhhhhcCCc---------------------------------------------------
Confidence 99999999999999999999999876551
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELF 266 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell 266 (879)
+..|..+-|.||+|||.+.|.+ |+++.|+||+|||+.||+
T Consensus 232 ---------------------------------------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l 272 (419)
T KOG0663|consen 232 ---------------------------------------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELL 272 (419)
T ss_pred ---------------------------------------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHH
Confidence 1235568899999999999977 999999999999999999
Q ss_pred c--CCCCChhhHhHHhhhcc-------cC--------------CCc--------hhhc--cChhhHHHHHHhcCCCCCCC
Q 002801 267 C--PFSTGEEKTRTMSSLRH-------RV--------------LPP--------QLLL--KFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 267 ~--pf~~~~~~~~~~~~~~~-------~~--------------~~~--------~~~~--~~~~~~~li~~~L~~dP~~R 313 (879)
. |.+++.........+-. .+ +++ .+.. .+....+|+..+|..||.+|
T Consensus 273 ~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR 352 (419)
T KOG0663|consen 273 TQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKR 352 (419)
T ss_pred hcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccc
Confidence 9 77666443333322210 00 000 1111 23556799999999999999
Q ss_pred CCHHHHhhcccccCCcCchH
Q 002801 314 PKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 314 pt~~evl~hp~~~~~~~~~~ 333 (879)
.||+|.|+|+||.+.+.+..
T Consensus 353 ~tA~~~L~h~~F~e~P~p~~ 372 (419)
T KOG0663|consen 353 ITAEDGLKHEYFRETPLPID 372 (419)
T ss_pred ccHHHhhcccccccCCCCCC
Confidence 99999999999998655444
No 43
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.2e-34 Score=281.85 Aligned_cols=236 Identities=15% Similarity=0.166 Sum_probs=182.5
Q ss_pred cccccccccccCCCCC--ccc--ccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCC
Q 002801 5 LLRGERFGVRGDDSND--FEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 80 (879)
Q Consensus 5 ~~~~~~~~~~~~~~~~--~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~ 80 (879)
..+|++++++.-.-.. .++ -..|+...+....|+|+++..+ ++.. ...+-||.||+ ..+|...++.....++
T Consensus 24 ~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD-~F~~--~~~l~lVfEfm-~tdLe~vIkd~~i~l~ 99 (318)
T KOG0659|consen 24 TETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELID-VFPH--KSNLSLVFEFM-PTDLEVVIKDKNIILS 99 (318)
T ss_pred cCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhh-hccC--CCceEEEEEec-cccHHHHhcccccccC
Confidence 4567888876442221 111 1124444445566888888777 4433 34578999999 6799999988888999
Q ss_pred hhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhh
Q 002801 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (879)
Q Consensus 81 ~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (879)
..+++.++.++++||+|||++.|+||||||.|+||+++|++|++|||+|+.++++...
T Consensus 100 pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~---------------------- 157 (318)
T KOG0659|consen 100 PADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI---------------------- 157 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc----------------------
Confidence 9999999999999999999999999999999999999999999999999987655221
Q ss_pred hhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceec
Q 002801 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (879)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (879)
.+..+-|.||+|
T Consensus 158 --------------------------------------------------------------------~~~~V~TRWYRA 169 (318)
T KOG0659|consen 158 --------------------------------------------------------------------QTHQVVTRWYRA 169 (318)
T ss_pred --------------------------------------------------------------------cccceeeeeccC
Confidence 122366999999
Q ss_pred cccccCCC-CCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhccc----------------------CCCc-----h
Q 002801 241 PEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR----------------------VLPP-----Q 290 (879)
Q Consensus 241 PE~~~~~~-~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~~~----------------------~~~~-----~ 290 (879)
||.+.|.. |+..+||||.|||+.||+- ||+++....+.+..+-.. ..|. .
T Consensus 170 PELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~l 249 (318)
T KOG0659|consen 170 PELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNL 249 (318)
T ss_pred hHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccc
Confidence 99999976 9999999999999999998 999887776665544211 0111 2
Q ss_pred hhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchHH
Q 002801 291 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 334 (879)
Q Consensus 291 ~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~e 334 (879)
+...+.++.+|+.+||..||.+|+++.|+|+|+||.+.+.+...
T Consensus 250 f~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~ 293 (318)
T KOG0659|consen 250 FPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPP 293 (318)
T ss_pred cccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCCh
Confidence 23345667899999999999999999999999999976655443
No 44
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=2.6e-31 Score=283.28 Aligned_cols=284 Identities=27% Similarity=0.430 Sum_probs=248.1
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
.+.+|.+.|++++|+|++++|++++.||.|++|++.... .......|...+.++.|++. ++.|++++.||.|
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~-------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i 75 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE-------LLRTLKGHTGPVRDVAASAD-GTYLASGSSDKTI 75 (289)
T ss_pred HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC-------cEEEEecCCcceeEEEECCC-CCEEEEEcCCCeE
Confidence 355899999999999999999999999999999987532 11222346778889999985 6899999999999
Q ss_pred EEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEE
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFG 721 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tg 721 (879)
.+||+.+++.+..+..|...|.++.|++ ++.++++++.|+.|.+||+++++.+..+. +...+.+++|+|+ +.+++++
T Consensus 76 ~i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~ 153 (289)
T cd00200 76 RLWDLETGECVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPD-GTFVASS 153 (289)
T ss_pred EEEEcCcccceEEEeccCCcEEEEEEcC-CCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCc-CCEEEEE
Confidence 9999998888888889999999999999 78889988889999999999888888887 4567999999998 7888888
Q ss_pred eCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEE
Q 002801 722 SADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800 (879)
Q Consensus 722 s~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~ 800 (879)
+.|+.|++||+++.+ ++..+..|...|.++.|+ ++..+++++.|+.|++||++.. ..+..+..|...+.++.
T Consensus 154 ~~~~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~------~~~~~~~~~~~~i~~~~ 226 (289)
T cd00200 154 SQDGTIKLWDLRTGK-CVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTG------KCLGTLRGHENGVNSVA 226 (289)
T ss_pred cCCCcEEEEEccccc-cceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCC------ceecchhhcCCceEEEE
Confidence 889999999999777 477788899999999999 8889999999999999999876 56777778888999999
Q ss_pred EecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 801 LSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 801 ~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|+|++.++++++.|+.|++|++..++++..+. .|...|.+++|+|++. .|++++.||.|++|+
T Consensus 227 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iw~ 289 (289)
T cd00200 227 FSPDGYLLASGSEDGTIRVWDLRTGECVQTLS-------------GHTNSVTSLAWSPDGK-RLASGSADGTIRIWD 289 (289)
T ss_pred EcCCCcEEEEEcCCCcEEEEEcCCceeEEEcc-------------ccCCcEEEEEECCCCC-EEEEecCCCeEEecC
Confidence 99998899999989999999998766665443 4566799999999999 999999999999996
No 45
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-32 Score=292.05 Aligned_cols=281 Identities=20% Similarity=0.300 Sum_probs=247.8
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEe-ccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
+..++..|.+|.|+|....++++-.+|.|.||+.++... +..+ -+.-+|.+..|-.. ++++++|+.|..|
T Consensus 9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtm--------VksfeV~~~PvRa~kfiaR-knWiv~GsDD~~I 79 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTM--------VKSFEVSEVPVRAAKFIAR-KNWIVTGSDDMQI 79 (794)
T ss_pred hhccCCceeeeecCCCCceEEEeeecCeeEEEeccccee--------eeeeeecccchhhheeeec-cceEEEecCCceE
Confidence 346889999999999999999999999999999987321 1111 24567888888875 9999999999999
Q ss_pred EEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC-ceEEEEecCCc-eEEEEeeCCCCCEEEE
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG-VSIGTIKTKAN-VCCVQFPLDSGRSLAF 720 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~-~~i~~~~~~~~-v~~v~~~p~~~~~l~t 720 (879)
+||+.+|++.+..|..|..-|.+++.+| +.-+++|+|+|-+|++||...+ .+.+++..|.. |.+|+|+|.+.+.+|+
T Consensus 80 rVfnynt~ekV~~FeAH~DyIR~iavHP-t~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS 158 (794)
T KOG0276|consen 80 RVFNYNTGEKVKTFEAHSDYIRSIAVHP-TLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFAS 158 (794)
T ss_pred EEEecccceeeEEeeccccceeeeeecC-CCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceee
Confidence 9999999999999999999999999999 6679999999999999999865 67788887665 9999999999999999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc---CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEE
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV---DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKN 797 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs---~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~ 797 (879)
++-|++|++|.+.++. |..++.+|.+.|+||.|- |..+|+||+.|.+|+|||..+. .|++++.||++.|+
T Consensus 159 ~sLDrTVKVWslgs~~-~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk------~CV~TLeGHt~Nvs 231 (794)
T KOG0276|consen 159 ASLDRTVKVWSLGSPH-PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTK------SCVQTLEGHTNNVS 231 (794)
T ss_pred eeccccEEEEEcCCCC-CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchH------HHHHHhhcccccce
Confidence 9999999999999887 689999999999999997 4459999999999999999997 89999999999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEE
Q 002801 798 FVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKI 875 (879)
Q Consensus 798 ~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~v 875 (879)
++.|+|.=..|+|||+||+|+||+-.+-+...++.++ .+.|++|+-.+.+. .++.|...|.|-|
T Consensus 232 ~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~g-------------leRvW~I~~~k~~~-~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 232 FVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYG-------------LERVWCIAAHKGDG-KIAVGFDEGSVTV 295 (794)
T ss_pred EEEecCCCcEEEEecCCccEEEecCcceehhhhhhcC-------------CceEEEEeecCCCC-eEEEeccCCcEEE
Confidence 9999999999999999999999998877666666543 34599999888888 7888887787654
No 46
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=1.3e-33 Score=288.63 Aligned_cols=274 Identities=21% Similarity=0.326 Sum_probs=237.0
Q ss_pred CCCCceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccc
Q 002801 531 GRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYP 610 (879)
Q Consensus 531 ~~~~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~ 610 (879)
+++.++++|+..|...+|+...+... .-+..|.++|+++.|+++|.++++|..+|.||+|+.+-.....
T Consensus 106 PeGRRLltgs~SGEFtLWNg~~fnFE-----tilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~------ 174 (464)
T KOG0284|consen 106 PEGRRLLTGSQSGEFTLWNGTSFNFE-----TILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKI------ 174 (464)
T ss_pred CCCceeEeecccccEEEecCceeeHH-----HHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHH------
Confidence 34677899999999999997543322 2245899999999999999999999999999999876421111
Q ss_pred eEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeC
Q 002801 611 VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (879)
Q Consensus 611 ~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~ 690 (879)
..-.|...|.+++|+|. .+.+++++.||+|+|||....+.-..+.+|.-.|.+++|+| ...++|+||.|..|++||.
T Consensus 175 -~~ahh~eaIRdlafSpn-DskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP-~kgLiasgskDnlVKlWDp 251 (464)
T KOG0284|consen 175 -IQAHHAEAIRDLAFSPN-DSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHP-TKGLIASGSKDNLVKLWDP 251 (464)
T ss_pred -hhHhhhhhhheeccCCC-CceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCC-ccceeEEccCCceeEeecC
Confidence 11235689999999994 88999999999999999988887778899999999999999 7889999999999999999
Q ss_pred CCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCC
Q 002801 691 NQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDN 767 (879)
Q Consensus 691 ~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~ 767 (879)
+++.++.++.. +..|..+.|+|+ +++|+++|.|..+++||+|+.+. +.++++|++-|+++.|+ ...+|.+|+.||
T Consensus 252 rSg~cl~tlh~HKntVl~~~f~~n-~N~Llt~skD~~~kv~DiR~mkE-l~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dg 329 (464)
T KOG0284|consen 252 RSGSCLATLHGHKNTVLAVKFNPN-GNWLLTGSKDQSCKVFDIRTMKE-LFTYRGHKKDVTSLTWHPLNESLFTSGGSDG 329 (464)
T ss_pred CCcchhhhhhhccceEEEEEEcCC-CCeeEEccCCceEEEEehhHhHH-HHHhhcchhhheeeccccccccceeeccCCC
Confidence 99999999885 455999999999 79999999999999999997774 88999999999999998 889999999999
Q ss_pred cEEEEecCCCcccccCCceEEE-eCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCC
Q 002801 768 TLKLWDLSMCTSRVIDTPLHSF-TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPM 826 (879)
Q Consensus 768 ~i~lwd~~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~ 826 (879)
.|..|.+... .++..+ .+|...|++++|+|-|..||+|+.|.++++|....+.
T Consensus 330 svvh~~v~~~------~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~ 383 (464)
T KOG0284|consen 330 SVVHWVVGLE------EPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRPG 383 (464)
T ss_pred ceEEEecccc------ccccCCCcccccceeeeeccccceeEeecCCCcceeeeccCCCC
Confidence 9999999843 334333 4799999999999999999999999999999876543
No 47
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.2e-32 Score=278.23 Aligned_cols=266 Identities=21% Similarity=0.381 Sum_probs=240.6
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
++++.|++|++||+.++.+.+.++ ||.+.|.+|+|+..|+++|+|+.|-.+++||++.. ........+|
T Consensus 124 ~~as~d~tikv~D~~tg~~e~~Lr-----GHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~------~~c~ks~~gh 192 (406)
T KOG0295|consen 124 VSASEDATIKVFDTETGELERSLR-----GHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF------FRCIKSLIGH 192 (406)
T ss_pred EEecCCceEEEEEccchhhhhhhh-----ccccceeEEEEecCccEEEecCCccchhheeHHHH------HHHHHHhcCc
Confidence 566679999999999998865554 99999999999999999999999999999998762 1122334568
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceE
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i 696 (879)
...|++++|-|. +++|+|++.|.+|+.|++.++-++.+|.+|...|..++.+. ||.++|+|+.|.+|++|-+.++++.
T Consensus 193 ~h~vS~V~f~P~-gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~-DGti~As~s~dqtl~vW~~~t~~~k 270 (406)
T KOG0295|consen 193 EHGVSSVFFLPL-GDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQ-DGTIIASCSNDQTLRVWVVATKQCK 270 (406)
T ss_pred ccceeeEEEEec-CCeeeecccccceeEEecccceeEEeccCchHhEEEEEecC-CeeEEEecCCCceEEEEEeccchhh
Confidence 889999999996 89999999999999999999999999999999999999998 9999999999999999999999877
Q ss_pred EEEe-cCCceEEEEeeCC--------------CCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEE
Q 002801 697 GTIK-TKANVCCVQFPLD--------------SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTL 760 (879)
Q Consensus 697 ~~~~-~~~~v~~v~~~p~--------------~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l 760 (879)
..+. +.-.|.|++|-|. ++.++++++.|++|++||+.++.. +.++.+|...|..++|+ .|++|
T Consensus 271 ~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~c-L~tL~ghdnwVr~~af~p~Gkyi 349 (406)
T KOG0295|consen 271 AELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMC-LFTLVGHDNWVRGVAFSPGGKYI 349 (406)
T ss_pred hhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeE-EEEEecccceeeeeEEcCCCeEE
Confidence 7666 4567899998775 235899999999999999999985 99999999999999999 99999
Q ss_pred EEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEec
Q 002801 761 VSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 761 ~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~ 822 (879)
+|+..|++|++||+++. +|++++..|..-|++++|+.+..|++|||-|..+++|.-
T Consensus 350 ~ScaDDktlrvwdl~~~------~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 350 LSCADDKTLRVWDLKNL------QCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred EEEecCCcEEEEEeccc------eeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 99999999999999997 889999999999999999999999999999999999963
No 48
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-34 Score=304.77 Aligned_cols=205 Identities=16% Similarity=0.145 Sum_probs=169.0
Q ss_pred cccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
+|.++.+|.+..|+|++.+.+ ||.... -.+||||||..|-|.+.|+.. +++.......+.++|+.|+.|||.+.||
T Consensus 159 kETdIKHLRkLkH~NII~FkG-VCtqsP--cyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~hKII 234 (904)
T KOG4721|consen 159 KETDIKHLRKLKHPNIITFKG-VCTQSP--CYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLHKII 234 (904)
T ss_pred hhhhHHHHHhccCcceeeEee-eecCCc--eeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHhhHh
Confidence 567888899999999998776 997543 458999999999999999665 6889999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
|||||.-||||+.+..|||+|||.++.....+
T Consensus 235 HRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S------------------------------------------------ 266 (904)
T KOG4721|consen 235 HRDLKSPNILISYDDVVKISDFGTSKELSDKS------------------------------------------------ 266 (904)
T ss_pred hhccCCCceEeeccceEEeccccchHhhhhhh------------------------------------------------
Confidence 99999999999999999999999987642110
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~e 264 (879)
..-.++||..|||||++...+++.|+|||||||+|||
T Consensus 267 -------------------------------------------TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWE 303 (904)
T KOG4721|consen 267 -------------------------------------------TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWE 303 (904)
T ss_pred -------------------------------------------hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHH
Confidence 0123699999999999999999999999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
||| ||.........+..-....--|.+..++..++-|+.+||...|..||++.++|.|-=
T Consensus 304 mLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 304 MLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred HHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 999 886544322222211112223455567778899999999999999999999999853
No 49
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=302.34 Aligned_cols=214 Identities=18% Similarity=0.198 Sum_probs=175.1
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCC-CChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~-l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
+++..+....|+|+|.++. +-.|.....+|||+|||..|.+. |.... .+ +++.+++.|+++++.||+|||.|||||
T Consensus 157 ~EIailKkl~H~nVV~LiE-vLDDP~s~~~YlVley~s~G~v~-w~p~d-~~els~~~Ar~ylrDvv~GLEYLH~QgiiH 233 (576)
T KOG0585|consen 157 REIAILKKLHHPNVVKLIE-VLDDPESDKLYLVLEYCSKGEVK-WCPPD-KPELSEQQARKYLRDVVLGLEYLHYQGIIH 233 (576)
T ss_pred HHHHHHHhcCCcCeeEEEE-eecCcccCceEEEEEeccCCccc-cCCCC-cccccHHHHHHHHHHHHHHHHHHHhcCeec
Confidence 4445567788899999888 77788888999999999998875 44333 34 899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+|+||+.+|+|||+|||.+..+.....+ +
T Consensus 234 RDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~-~--------------------------------------------- 267 (576)
T KOG0585|consen 234 RDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE-G--------------------------------------------- 267 (576)
T ss_pred cccchhheEEcCCCcEEeeccceeeecccCCcc-c---------------------------------------------
Confidence 999999999999999999999998654211000 0
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC----CCccCcchhHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 261 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvi 261 (879)
. -. .....+|||.|+|||.+.++. .+++.|||||||+
T Consensus 268 -----------------~----------d~------------~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVT 308 (576)
T KOG0585|consen 268 -----------------S----------DD------------QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVT 308 (576)
T ss_pred -----------------c----------HH------------HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhh
Confidence 0 00 011248999999999998733 4889999999999
Q ss_pred HHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 262 l~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||.|+. ||..........+++......|...+..+.+++||.+||.+||.+|++..+|..|||....
T Consensus 309 LYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 309 LYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 999998 9988877777767766666666666778999999999999999999999999999999854
No 50
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=3.4e-32 Score=300.61 Aligned_cols=238 Identities=24% Similarity=0.390 Sum_probs=216.7
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCC-------------------------------eEEEEeccCCCcEEE
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-------------------------------QVLTEMREHERRVWS 665 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~-------------------------------~~~~~~~~h~~~v~s 665 (879)
...++|..|++. ..+||.|-.|..|++|.+... .....+.+|.++|..
T Consensus 378 ~~~v~ca~fSdd-ssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg 456 (707)
T KOG0263|consen 378 YQGVTCAEFSDD-SSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG 456 (707)
T ss_pred CCcceeEeecCC-cchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence 456788888874 778888888999999987621 113446689999999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEcc
Q 002801 666 IDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG 744 (879)
Q Consensus 666 v~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~ 744 (879)
+.|+| +.++|++||.|++|++|++.+..++..+..| .+|++|.|+|. |.|||+||.|++.++|...... |+..+.+
T Consensus 457 ~sFsP-d~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~-GyYFatas~D~tArLWs~d~~~-PlRifag 533 (707)
T KOG0263|consen 457 CSFSP-DRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPR-GYYFATASHDQTARLWSTDHNK-PLRIFAG 533 (707)
T ss_pred eeecc-cccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCC-ceEEEecCCCceeeeeecccCC-chhhhcc
Confidence 99999 9999999999999999999999999888854 67999999999 9999999999999999998866 7999999
Q ss_pred CCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecC
Q 002801 745 HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 745 h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~ 823 (879)
|-.-|.|+.|+ +..+++|||.|.++|+||+.++ ..++.|.||.++|.+|+|||+|.|||+|++||.|.+||+.
T Consensus 534 hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G------~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~ 607 (707)
T KOG0263|consen 534 HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG------NSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLA 607 (707)
T ss_pred cccccceEEECCcccccccCCCCceEEEEEcCCC------cEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcC
Confidence 99999999999 9999999999999999999998 6799999999999999999999999999999999999999
Q ss_pred CCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 824 FPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
.++++..+. +|.+.|.+|.|+.+|. .||+||.|.+|++||+
T Consensus 608 ~~~~v~~l~-------------~Ht~ti~SlsFS~dg~-vLasgg~DnsV~lWD~ 648 (707)
T KOG0263|consen 608 NGSLVKQLK-------------GHTGTIYSLSFSRDGN-VLASGGADNSVRLWDL 648 (707)
T ss_pred CCcchhhhh-------------cccCceeEEEEecCCC-EEEecCCCCeEEEEEc
Confidence 998887664 6788899999999999 9999999999999997
No 51
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=5.5e-33 Score=290.18 Aligned_cols=290 Identities=16% Similarity=0.241 Sum_probs=244.3
Q ss_pred cccCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 563 DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 563 ~l~~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
.+.||...|+++.|.| .+.+|++||.|++|+||++-.. .......++|..+|.+++|+.. +..++|+++|+.
T Consensus 209 ~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~------~~~lrtf~gH~k~Vrd~~~s~~-g~~fLS~sfD~~ 281 (503)
T KOG0282|consen 209 NLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD------RRCLRTFKGHRKPVRDASFNNC-GTSFLSASFDRF 281 (503)
T ss_pred eccCCccccchhhhccceeeEEEecCCCceEEEEEEecC------cceehhhhcchhhhhhhhcccc-CCeeeeeeccee
Confidence 4569999999999999 8999999999999999998751 1223345679999999999984 999999999999
Q ss_pred EEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEE
Q 002801 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 642 V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~t 720 (879)
|++||++||+++..+. -...++|+.|+|.+.+.|++|+.|+.|+.||+++++.++.+..+ +.|..+.|-++ +..+++
T Consensus 282 lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~-g~rFis 359 (503)
T KOG0282|consen 282 LKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDE-GRRFIS 359 (503)
T ss_pred eeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccC-CceEee
Confidence 9999999999999885 46689999999966699999999999999999999999888764 56999999999 889999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCc--EE
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNV--KN 797 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~--v~ 797 (879)
.+.|++++||+.+.+-........+.....++..+ ++.+++.=+.|+.|.++.+...-. ......|.||... -.
T Consensus 360 sSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r---~nkkK~feGh~vaGys~ 436 (503)
T KOG0282|consen 360 SSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFR---LNKKKRFEGHSVAGYSC 436 (503)
T ss_pred eccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccc---cCHhhhhcceeccCcee
Confidence 99999999999988763222222233345577777 999999999999999999765422 2445678888654 34
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 798 FVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 798 ~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
.|.|||||.+|++|+.||.+++||..+-+.+..+ ..|.++|..+.|+|..+..+|||+.||.|++|+
T Consensus 437 ~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~l-------------kah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 437 QVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKL-------------KAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eEEEcCCCCeEEeecCCccEEEeechhhhhhhcc-------------ccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 6789999999999999999999999987766544 367889999999999776899999999999996
No 52
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-34 Score=282.31 Aligned_cols=228 Identities=16% Similarity=0.221 Sum_probs=169.0
Q ss_pred cccccccccCCCCCcccccc--cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc-CCCCCCChhH
Q 002801 7 RGERFGVRGDDSNDFELRKH--SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYE 83 (879)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~-~~~~~l~~~~ 83 (879)
.|++|+++-.-..... |+| ..+....|++.++++..|.-.+ ....-+.||||.++||.|+..+. +....+++.+
T Consensus 86 T~ekfALKvL~Ds~KA-RrEVeLHw~~s~h~~iV~IidVyeNs~--~~rkcLLiVmE~meGGeLfsriq~~g~~afTEre 162 (400)
T KOG0604|consen 86 TQEKFALKVLLDSPKA-RREVELHWMASGHPHIVSIIDVYENSY--QGRKCLLIVMECMEGGELFSRIQDRGDQAFTERE 162 (400)
T ss_pred chhhhHHHHHhcCHHH-HhHhhhhhhhcCCCceEEeehhhhhhc--cCceeeEeeeecccchHHHHHHHHcccccchHHH
Confidence 4666666544222222 333 3333334455555555444111 12335789999999999999994 4445799999
Q ss_pred HHHHHHHHHHHHHhhhhcCcccccCCCcceeec---cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhh
Q 002801 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (879)
Q Consensus 84 ~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (879)
+..|++||+.||.|||+.+|+||||||+|+|.. .+..+|++|||+|+.-....
T Consensus 163 a~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~------------------------ 218 (400)
T KOG0604|consen 163 ASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG------------------------ 218 (400)
T ss_pred HHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCc------------------------
Confidence 999999999999999999999999999999996 34568999999998732110
Q ss_pred hhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceec
Q 002801 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (879)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (879)
.....+-||+|.|
T Consensus 219 -------------------------------------------------------------------~L~TPc~TPyYva 231 (400)
T KOG0604|consen 219 -------------------------------------------------------------------DLMTPCFTPYYVA 231 (400)
T ss_pred -------------------------------------------------------------------cccCCcccccccC
Confidence 0122366999999
Q ss_pred cccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhH--hHH-hhhcc---cCCCchhhccChhhHHHHHHhcCCCCC
Q 002801 241 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKT--RTM-SSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 241 PE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~--~~~-~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (879)
||++....|+..+|+|||||++|-||| ||++..... .-| ..++. .+..|.|...+..++++|+++|.-+|.
T Consensus 232 Pevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~Pt 311 (400)
T KOG0604|consen 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPT 311 (400)
T ss_pred HHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCch
Confidence 999988899999999999999999999 776543211 111 22222 234577888889999999999999999
Q ss_pred CCCCHHHHhhcccccCC
Q 002801 312 GRPKMGELLQSEFLNEP 328 (879)
Q Consensus 312 ~Rpt~~evl~hp~~~~~ 328 (879)
+|.|+.+++.|||++..
T Consensus 312 eRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 312 ERLTIEEVMDHPWINQY 328 (400)
T ss_pred hheeHHHhhcCchhccc
Confidence 99999999999999864
No 53
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=4.5e-31 Score=300.85 Aligned_cols=284 Identities=26% Similarity=0.422 Sum_probs=246.1
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vw 645 (879)
.|...|.++.|+++|+++++++.|+.|++|+...... .... ....|...|++++|+|. +.++++++.|++|+||
T Consensus 157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~--~~~~---~l~~h~~~v~~~~fs~d-~~~l~s~s~D~tiriw 230 (456)
T KOG0266|consen 157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS--NLLR---ELSGHTRGVSDVAFSPD-GSYLLSGSDDKTLRIW 230 (456)
T ss_pred cccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc--hhhc---cccccccceeeeEECCC-CcEEEEecCCceEEEe
Confidence 3478999999999999999999999999999854321 0111 11468899999999995 8899999999999999
Q ss_pred Ec-CCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeC
Q 002801 646 DV-SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 646 d~-~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~ 723 (879)
|+ ..+..++.+++|...|++++|+| .++++++|+.|++|+|||+++++++..+..+ ..|++++|+++ +++|++++.
T Consensus 231 d~~~~~~~~~~l~gH~~~v~~~~f~p-~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d-~~~l~s~s~ 308 (456)
T KOG0266|consen 231 DLKDDGRNLKTLKGHSTYVTSVAFSP-DGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPD-GNLLVSASY 308 (456)
T ss_pred eccCCCeEEEEecCCCCceEEEEecC-CCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCC-CCEEEEcCC
Confidence 99 55688999999999999999999 7899999999999999999999999999865 46999999999 899999999
Q ss_pred CCeEEEEEcCCCce-eeEEEccCCCC--EEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcE---
Q 002801 724 DHRIYYYDLRNSKI-PLCTLIGHNKT--VSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK--- 796 (879)
Q Consensus 724 d~~I~iwDl~~~~~-~~~~~~~h~~~--V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v--- 796 (879)
|+.|++||+.++.. ++..+.++... ++++.|+ ++.+|++++.|+.+++||+... .++..+.+|.+.+
T Consensus 309 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~------~~~~~~~~~~~~~~~~ 382 (456)
T KOG0266|consen 309 DGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSG------KSVGTYTGHSNLVRCI 382 (456)
T ss_pred CccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCC------cceeeecccCCcceeE
Confidence 99999999999884 25566666555 9999999 9999999999999999999987 7788899998854
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCC-CCCEEEEEEeCCCCcEEEEEe--CCCcE
Q 002801 797 NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDA-AQFISSVCWRGQSSNTLVAAN--SSGNI 873 (879)
Q Consensus 797 ~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~~~l~s~~--~Dg~I 873 (879)
.+...++.+.++++|+.|+.|++|++.++..+..+ .+| ...|..++|+|... ++++++ .|+.|
T Consensus 383 ~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l-------------~~h~~~~~~~~~~~~~~~-~~~s~s~~~d~~~ 448 (456)
T KOG0266|consen 383 FSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRL-------------EGHSKAAVSDLSSHPTEN-LIASSSFEGDGLI 448 (456)
T ss_pred ecccccCCCCeEEEEeCCceEEEEeCCccchhhhh-------------cCCCCCceeccccCCCcC-eeeecCcCCCceE
Confidence 33455778999999999999999999986655544 456 77899999999999 899888 78999
Q ss_pred EEEE
Q 002801 874 KILE 877 (879)
Q Consensus 874 ~vw~ 877 (879)
++|.
T Consensus 449 ~~w~ 452 (456)
T KOG0266|consen 449 RLWK 452 (456)
T ss_pred EEec
Confidence 9996
No 54
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-34 Score=279.05 Aligned_cols=197 Identities=19% Similarity=0.190 Sum_probs=162.2
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
..||+++..-+ +++ ...-+|+|.|.|+.|.|+++|... -.+++.+.+.|++|+++|+.|||.++||||||||+|||
T Consensus 80 ~GHP~II~l~D-~ye--s~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENIL 155 (411)
T KOG0599|consen 80 MGHPYIIDLQD-VYE--SDAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENIL 155 (411)
T ss_pred cCCCcEEEeee-ecc--CcchhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhhee
Confidence 56777776655 333 445689999999999999999554 57899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++++.++||+|||.+..+...
T Consensus 156 lddn~~i~isDFGFa~~l~~G----------------------------------------------------------- 176 (411)
T KOG0599|consen 156 LDDNMNIKISDFGFACQLEPG----------------------------------------------------------- 176 (411)
T ss_pred eccccceEEeccceeeccCCc-----------------------------------------------------------
Confidence 999999999999999775221
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----C-CCCCccCcchhHHHHHHHhhc-
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----G-APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~-~~~~~~sDIwSlGvil~ell~- 267 (879)
.+....||||.|.|||.+. + ..|+..+|+|++|||||.||.
T Consensus 177 --------------------------------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaG 224 (411)
T KOG0599|consen 177 --------------------------------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAG 224 (411)
T ss_pred --------------------------------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcC
Confidence 0235579999999999884 2 348999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcc---cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 --PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
||...... .....+.. ....|.|.+.+...++||.+||+.||.+|.|++|+|+||||..
T Consensus 225 cpPFwHRkQm-lMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 225 CPPFWHRKQM-LMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred CCchhHHHHH-HHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 66543222 22222333 3456889999999999999999999999999999999999963
No 55
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-33 Score=290.15 Aligned_cols=218 Identities=20% Similarity=0.268 Sum_probs=165.5
Q ss_pred ccccccCceeecccccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCCC---CCCChhHHHHHHHHHHHH
Q 002801 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPK---RSVDVYECLHIFRQIVEI 94 (879)
Q Consensus 22 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~---~~l~~~~~~~i~~qi~~~ 94 (879)
..|+..-+..+.|.+| ++..++ ++..+. ...+|+|+||+ .-+|..+++... ..++...++.+++||+.|
T Consensus 57 aiREisllk~L~~~~~--iv~L~d-v~~~~~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~g 132 (323)
T KOG0594|consen 57 AIREISLLKRLSHANH--IVRLHD-VIHTSNNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRG 132 (323)
T ss_pred hhHHHHHHHHhCCCcc--eEEEEe-eeeecccccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHH
Confidence 3466555555666665 666555 665443 23689999999 679999996654 357888999999999999
Q ss_pred HHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccc
Q 002801 95 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (879)
Q Consensus 95 l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (879)
|+|||++||+||||||+||||+++|.+||+|||+|+.+..+..
T Consensus 133 l~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~------------------------------------- 175 (323)
T KOG0594|consen 133 LAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR------------------------------------- 175 (323)
T ss_pred HHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc-------------------------------------
Confidence 9999999999999999999999999999999999986532210
Q ss_pred cCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccC
Q 002801 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCAS 253 (879)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~s 253 (879)
..+..++|.||+|||++.|. .|++..
T Consensus 176 -----------------------------------------------------~yt~evvTlWYRaPEvLlGs~~Ys~~v 202 (323)
T KOG0594|consen 176 -----------------------------------------------------TYTPEVVTLWYRAPEVLLGSTSYSTSV 202 (323)
T ss_pred -----------------------------------------------------cccccEEEeeccCHHHhcCCCcCCCCc
Confidence 12446899999999999998 499999
Q ss_pred cchhHHHHHHHhhc--CCCCChhhHhHHhhhcc---c-----------------CCC---------chhhccChhhHHHH
Q 002801 254 DIYRLGVLLFELFC--PFSTGEEKTRTMSSLRH---R-----------------VLP---------PQLLLKFPKEASFC 302 (879)
Q Consensus 254 DIwSlGvil~ell~--pf~~~~~~~~~~~~~~~---~-----------------~~~---------~~~~~~~~~~~~li 302 (879)
||||+|||++||++ |.+.+.........+-. . .++ .......+...+++
T Consensus 203 DiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll 282 (323)
T KOG0594|consen 203 DIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELL 282 (323)
T ss_pred chHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHH
Confidence 99999999999999 66655444333322210 0 000 01112234678999
Q ss_pred HHhcCCCCCCCCCHHHHhhcccccCCcCchH
Q 002801 303 LWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 303 ~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
.+||+.+|.+|.|+..+|+||||........
T Consensus 283 ~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 283 SKLLQYDPAKRISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred HHHhccCcccCcCHHHHhcChhhcccccchh
Confidence 9999999999999999999999998755443
No 56
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.8e-31 Score=291.26 Aligned_cols=308 Identities=17% Similarity=0.267 Sum_probs=264.0
Q ss_pred CCceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEecCcccCcCcccccce
Q 002801 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFD-RDGELFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (879)
Q Consensus 533 ~~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fs-pdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~ 611 (879)
+..++.-..|..+-++|..++++...+ .|..+.|.+++|- |+.+++|.|+..+.+++|++.+... .
T Consensus 293 ~~~~l~vtaeQnl~l~d~~~l~i~k~i-----vG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c--------~ 359 (775)
T KOG0319|consen 293 MSQLLLVTAEQNLFLYDEDELTIVKQI-----VGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYC--------Q 359 (775)
T ss_pred cCceEEEEccceEEEEEccccEEehhh-----cCCchhheeeeecCCccceEEEEeCCCceEEEecCCCce--------E
Confidence 344566666788888888888877554 4777888888885 6788999999999999998876322 2
Q ss_pred EEeccCCCeeEEE-EeCCCCCeEEEeeCCCcEEEEEcCCCe----EEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEE
Q 002801 612 VEMASRSKLSSIC-WNSYIKSQIASSNFEGVVQVWDVSRSQ----VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686 (879)
Q Consensus 612 ~~~~~~~~i~~l~-~~~~~~~~l~s~~~dg~V~vwd~~~~~----~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~ 686 (879)
+..+|...|.++. |.. +.+|+||+.|.+|++|-++++. ++....+|+..|.+|+++.-....|+++|.|++++
T Consensus 360 ii~GH~e~vlSL~~~~~--g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK 437 (775)
T KOG0319|consen 360 IIPGHTEAVLSLDVWSS--GDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLK 437 (775)
T ss_pred EEeCchhheeeeeeccc--CcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEE
Confidence 4567899999998 543 6899999999999999875443 45566799999999999875678999999999999
Q ss_pred EEeCCCCc-----eEEEE-----ecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-
Q 002801 687 LWSINQGV-----SIGTI-----KTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV- 755 (879)
Q Consensus 687 iwd~~~~~-----~i~~~-----~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs- 755 (879)
+|++...+ .+.+. .|...|+||+++|+ ..++||||.|.+.+||++.+... ..++.||+..|.+|.|+
T Consensus 438 ~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~n-dkLiAT~SqDktaKiW~le~~~l-~~vLsGH~RGvw~V~Fs~ 515 (775)
T KOG0319|consen 438 LWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPN-DKLIATGSQDKTAKIWDLEQLRL-LGVLSGHTRGVWCVSFSK 515 (775)
T ss_pred EecCCCcccccccceehhhHHHHhhcccccceEecCC-CceEEecccccceeeecccCceE-EEEeeCCccceEEEEecc
Confidence 99997521 11111 14567999999999 78999999999999999997774 89999999999999999
Q ss_pred CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCC
Q 002801 756 DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNH 835 (879)
Q Consensus 756 ~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~ 835 (879)
.++.++|+|.|.+|+||.+.+. .|+++|.||++.|..+.|-.+|+.|++|+.||.+++|+++++..+.++
T Consensus 516 ~dq~laT~SgD~TvKIW~is~f------SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tl---- 585 (775)
T KOG0319|consen 516 NDQLLATCSGDKTVKIWSISTF------SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTL---- 585 (775)
T ss_pred ccceeEeccCCceEEEEEeccc------eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhh----
Confidence 8899999999999999999997 899999999999999999999999999999999999999998877655
Q ss_pred CCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 836 ADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 836 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
+.|...|++++-++... +++||+.||.|.+|.
T Consensus 586 ---------D~H~DrvWaL~~~~~~~-~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 586 ---------DAHNDRVWALSVSPLLD-MFVTGGGDGRIIFWK 617 (775)
T ss_pred ---------hhccceeEEEeecCccc-eeEecCCCeEEEEee
Confidence 58899999999999999 999999999999996
No 57
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-31 Score=258.48 Aligned_cols=239 Identities=25% Similarity=0.380 Sum_probs=211.3
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcC-----CCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEE
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS-----RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~-----~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iw 688 (879)
..|...|+.++..+.+.+.+++++.|.++.+|++. .|.+++.+++|...|..+..++ ++++++++|.|+++++|
T Consensus 12 ~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~-dg~~alS~swD~~lrlW 90 (315)
T KOG0279|consen 12 EGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSS-DGNFALSASWDGTLRLW 90 (315)
T ss_pred cCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEcc-CCceEEeccccceEEEE
Confidence 46889999999998888999999999999999874 4677899999999999999999 99999999999999999
Q ss_pred eCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEcc--CCCCEEEEEEc-C--CCEEEE
Q 002801 689 SINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG--HNKTVSYVKFV-D--ATTLVS 762 (879)
Q Consensus 689 d~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~--h~~~V~~v~fs-~--~~~l~s 762 (879)
|+.++++.+.|..| ..|.+|+|+|+ .+.+++|+.|.+|++|++-..- ..+... |+..|++++|+ + .-+|++
T Consensus 91 Dl~~g~~t~~f~GH~~dVlsva~s~d-n~qivSGSrDkTiklwnt~g~c--k~t~~~~~~~~WVscvrfsP~~~~p~Ivs 167 (315)
T KOG0279|consen 91 DLATGESTRRFVGHTKDVLSVAFSTD-NRQIVSGSRDKTIKLWNTLGVC--KYTIHEDSHREWVSCVRFSPNESNPIIVS 167 (315)
T ss_pred EecCCcEEEEEEecCCceEEEEecCC-CceeecCCCcceeeeeeecccE--EEEEecCCCcCcEEEEEEcCCCCCcEEEE
Confidence 99999998888755 55999999999 7899999999999999987654 333332 38899999998 3 679999
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCC
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGP 842 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~ 842 (879)
+|.|++|++||+++. +....+.||+..++.+++||||..+++|+.||.+.+||+..++.+.++
T Consensus 168 ~s~DktvKvWnl~~~------~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl----------- 230 (315)
T KOG0279|consen 168 ASWDKTVKVWNLRNC------QLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSL----------- 230 (315)
T ss_pred ccCCceEEEEccCCc------chhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEec-----------
Confidence 999999999999997 677899999999999999999999999999999999999998876655
Q ss_pred CCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 843 ETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 843 ~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
+|...|.++||+|+.. .|+++. +-.||||++
T Consensus 231 ---~a~~~v~sl~fspnry-wL~~at-~~sIkIwdl 261 (315)
T KOG0279|consen 231 ---EAFDIVNSLCFSPNRY-WLCAAT-ATSIKIWDL 261 (315)
T ss_pred ---cCCCeEeeEEecCCce-eEeecc-CCceEEEec
Confidence 4577899999999987 555555 455999996
No 58
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=310.28 Aligned_cols=201 Identities=18% Similarity=0.218 Sum_probs=169.7
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
.||=.+..|+ | ......+|+||||+.||++..+.+. +.+++..++.|+..|+.||.|||++|||+||||.+||||
T Consensus 427 ~HPFL~~L~~--~-fQT~~~l~fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL 501 (694)
T KOG0694|consen 427 RHPFLVNLFS--C-FQTKEHLFFVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL 501 (694)
T ss_pred cCCeEeeccc--c-cccCCeEEEEEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE
Confidence 6666666666 3 3456789999999999997776643 469999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+..|++||+|||+|+.--..
T Consensus 502 D~eGh~kiADFGlcKe~m~~------------------------------------------------------------ 521 (694)
T KOG0694|consen 502 DTEGHVKIADFGLCKEGMGQ------------------------------------------------------------ 521 (694)
T ss_pred cccCcEEecccccccccCCC------------------------------------------------------------
Confidence 99999999999999872100
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
..+..++||||.|||||++.+..|+.++|+|||||+|||||. ||.+.
T Consensus 522 ------------------------------g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd 571 (694)
T KOG0694|consen 522 ------------------------------GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD 571 (694)
T ss_pred ------------------------------CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 012356899999999999999999999999999999999999 99877
Q ss_pred hhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCcCchH
Q 002801 273 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRDSME 333 (879)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~~~~~ 333 (879)
.+.+...+++....+.|.+. +.++.+++.++|.++|.+|.. +++|.+||||+.+.....
T Consensus 572 dEee~FdsI~~d~~~yP~~l--s~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L 635 (694)
T KOG0694|consen 572 DEEEVFDSIVNDEVRYPRFL--SKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDL 635 (694)
T ss_pred CHHHHHHHHhcCCCCCCCcc--cHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHH
Confidence 77777777777777777654 478899999999999999965 588999999998775433
No 59
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.2e-33 Score=320.94 Aligned_cols=200 Identities=28% Similarity=0.448 Sum_probs=163.5
Q ss_pred cCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCC
Q 002801 54 IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (879)
Q Consensus 54 ~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~ 133 (879)
..+||.||||+..+|+++++.+...-...+.+++|+||++||.|+|++|||||||||.||+|++.+.|||.|||+|....
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 45799999999999999886653222588999999999999999999999999999999999999999999999997731
Q ss_pred CC--CcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeecccccccccccc
Q 002801 134 SD--SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDN 211 (879)
Q Consensus 134 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (879)
.. ..+. +. ++..
T Consensus 749 ~~~~~~d~------------------------------~~----------------~~~~-------------------- 762 (1351)
T KOG1035|consen 749 ENLESIDQ------------------------------DL----------------SFST-------------------- 762 (1351)
T ss_pred hhhhhHhh------------------------------cc----------------Cccc--------------------
Confidence 10 0000 00 0000
Q ss_pred ccchhhcccccCCCCccccccccccceeccccccCCC---CCccCcchhHHHHHHHhhcCCCCChhhHhHHhhhcccCCC
Q 002801 212 RVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP 288 (879)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvil~ell~pf~~~~~~~~~~~~~~~~~~~ 288 (879)
...++-....|..+||.-|+|||++.+.. |+.|+||||||||||||+.||.+.+++......++.+.+|
T Consensus 763 --------~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP 834 (1351)
T KOG1035|consen 763 --------NRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIP 834 (1351)
T ss_pred --------cccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCC
Confidence 00000011236689999999999998755 9999999999999999999999999999999999988887
Q ss_pred ch---hhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 289 PQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 289 ~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
.. +.+..+..+.+|++||..||++||||.|+|++.||-.
T Consensus 835 ~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 835 EPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred CCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 77 6677788999999999999999999999999999974
No 60
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-33 Score=287.91 Aligned_cols=197 Identities=20% Similarity=0.298 Sum_probs=165.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
..+..||++++..|. |++ ......|||||..||.|.+|+... +.|++.+++++|+||+.||.|+|.++|||||||.
T Consensus 106 IMSsLNHPhII~IyE-VFE--NkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKL 181 (668)
T KOG0611|consen 106 IMSSLNHPHIIQIYE-VFE--NKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKL 181 (668)
T ss_pred HHhhcCCCceeehhh-hhc--CCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhccceecccch
Confidence 456789999999888 654 455789999999999999999554 6899999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||||+.++++||+|||++..+....
T Consensus 182 ENILLD~N~NiKIADFGLSNly~~~k------------------------------------------------------ 207 (668)
T KOG0611|consen 182 ENILLDQNNNIKIADFGLSNLYADKK------------------------------------------------------ 207 (668)
T ss_pred hheeecCCCCeeeeccchhhhhcccc------------------------------------------------------
Confidence 99999999999999999986542110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCC-CccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvil~ell~-- 267 (879)
-...+||++.|++||++.|.+| ++.+|-|||||+||.|+.
T Consensus 208 -------------------------------------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGt 250 (668)
T KOG0611|consen 208 -------------------------------------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGT 250 (668)
T ss_pred -------------------------------------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcc
Confidence 1144799999999999999998 789999999999999998
Q ss_pred -CCCCChhhHhHHhhhccc-CCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 268 -PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
||.+..-. .....+..+ .+.|. .+..+..||+|||..+|.+|.|+++|..|=|++
T Consensus 251 MPFDG~Dhk-~lvrQIs~GaYrEP~---~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 251 MPFDGRDHK-RLVRQISRGAYREPE---TPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred cccCCchHH-HHHHHhhcccccCCC---CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 99665544 444444444 33332 235788999999999999999999999999987
No 61
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.7e-31 Score=273.08 Aligned_cols=288 Identities=18% Similarity=0.344 Sum_probs=239.6
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 562 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 562 ~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
..+..|.+.|.-+.||++|++||||+.|.+.-||++..... ..-.....+|..+|.-|.|+|. .++|++|+.|..
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~----~kl~~tlvgh~~~V~yi~wSPD-dryLlaCg~~e~ 292 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH----FKLKKTLVGHSQPVSYIMWSPD-DRYLLACGFDEV 292 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc----eeeeeeeecccCceEEEEECCC-CCeEEecCchHh
Confidence 34568999999999999999999999999999999875221 2222344678899999999995 899999999999
Q ss_pred EEEEEcCCCeEEEEec-cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec--CCceEEEEeeCCCCCEE
Q 002801 642 VQVWDVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT--KANVCCVQFPLDSGRSL 718 (879)
Q Consensus 642 V~vwd~~~~~~~~~~~-~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~--~~~v~~v~~~p~~~~~l 718 (879)
+.+||+.+|.....+. +|...+.+++|.| |+..+++|+.|+++..||+. |..+..++. ...|.+++..+| |.++
T Consensus 293 ~~lwDv~tgd~~~~y~~~~~~S~~sc~W~p-Dg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~D-gk~v 369 (519)
T KOG0293|consen 293 LSLWDVDTGDLRHLYPSGLGFSVSSCAWCP-DGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYD-GKYV 369 (519)
T ss_pred eeeccCCcchhhhhcccCcCCCcceeEEcc-CCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCC-CcEE
Confidence 9999999999887774 3468899999999 99999999999999999997 444444443 245999999999 8888
Q ss_pred EEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEE
Q 002801 719 AFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKN 797 (879)
Q Consensus 719 ~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~ 797 (879)
++...|..|++|+...... .. +..-..+|++...+ +++++++.=.+..+++||+... ..++.+.||...-.
T Consensus 370 l~v~~d~~i~l~~~e~~~d-r~-lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~------~lv~kY~Ghkq~~f 441 (519)
T KOG0293|consen 370 LLVTVDKKIRLYNREARVD-RG-LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN------KLVRKYFGHKQGHF 441 (519)
T ss_pred EEEecccceeeechhhhhh-hc-cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchh------hHHHHhhcccccce
Confidence 8888999999999876542 22 22345689999999 9999999889999999999964 77889999976544
Q ss_pred EE--EEecC-CCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEE
Q 002801 798 FV--GLSVW-DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIK 874 (879)
Q Consensus 798 ~v--~~sp~-~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~ 874 (879)
-+ +|--. ..++|+||+|+.|+||+..+++++..+ .+|...|++|+|+|..+.++|+||.||+||
T Consensus 442 iIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L-------------sGHs~~vNcVswNP~~p~m~ASasDDgtIR 508 (519)
T KOG0293|consen 442 IIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL-------------SGHSKTVNCVSWNPADPEMFASASDDGTIR 508 (519)
T ss_pred EEEeccCCCCcceEEecCCCceEEEEEccCCceeEee-------------cCCcceeeEEecCCCCHHHhhccCCCCeEE
Confidence 33 45443 369999999999999999999988765 478899999999999887999999999999
Q ss_pred EEEe
Q 002801 875 ILEM 878 (879)
Q Consensus 875 vw~l 878 (879)
||..
T Consensus 509 IWg~ 512 (519)
T KOG0293|consen 509 IWGP 512 (519)
T ss_pred EecC
Confidence 9964
No 62
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.7e-31 Score=251.71 Aligned_cols=277 Identities=22% Similarity=0.342 Sum_probs=233.5
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
+..|.++|.++.|+.||+|.+|||.|++|++|+.-.+... ....+|...|..++.+. +...+++|+.|..|.
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~li-------ktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~ 84 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALI-------KTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQ 84 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEeeccccccee-------eeecCCCceeeeccccc-cccccccCCCCceEE
Confidence 4578899999999999999999999999999996543221 12235777899888876 588999999999999
Q ss_pred EEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC--ceEEEEec-CCceEEEEeeCCCCCEEEE
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG--VSIGTIKT-KANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 644 vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~--~~i~~~~~-~~~v~~v~~~p~~~~~l~t 720 (879)
+||+++|+.++.+.+|...|+.|.|+. +...+++||-|.++++||.++. ++++.+.. ...|.+|... ++.|++
T Consensus 85 vwDV~TGkv~Rr~rgH~aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~---~heIva 160 (307)
T KOG0316|consen 85 VWDVNTGKVDRRFRGHLAQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA---EHEIVA 160 (307)
T ss_pred EEEcccCeeeeecccccceeeEEEecC-cceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec---ccEEEe
Confidence 999999999999999999999999998 8899999999999999999865 68888874 6779999987 678999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEE--
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKN-- 797 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~-- 797 (879)
|+.||+++.||+|.++. ...+.+ .+|++++|+ +++..+.++.|++|++.|-.++ +.+..+.||.+.-+
T Consensus 161 GS~DGtvRtydiR~G~l-~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tG------klL~sYkGhkn~eykl 231 (307)
T KOG0316|consen 161 GSVDGTVRTYDIRKGTL-SSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETG------KLLKSYKGHKNMEYKL 231 (307)
T ss_pred eccCCcEEEEEeeccee-ehhhcC--CcceeEEecCCCCEEEEeeccceeeecccchh------HHHHHhcccccceeee
Confidence 99999999999999884 334444 579999999 9999999999999999999987 78999999988644
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCC-EEEEEEeCCCCcEEEEEeCCCcEEEE
Q 002801 798 FVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF-ISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 798 ~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~p~~~~~l~s~~~Dg~I~vw 876 (879)
..+++.....+++||+||.|++||+...+.+..+.. +... |.+++++|.-. -|.+|...+ +..|
T Consensus 232 dc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~-------------~~~v~v~dl~~hp~~~-~f~~A~~~~-~~~~ 296 (307)
T KOG0316|consen 232 DCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSV-------------VSTVIVTDLSCHPTMD-DFITATGHG-DLFW 296 (307)
T ss_pred eeeecccceeEEeccCCceEEEEEeccceeeeeecc-------------CCceeEEeeecccCcc-ceeEecCCc-eece
Confidence 456777788999999999999999998888776642 2333 89999999987 566665433 3344
No 63
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=1.8e-30 Score=262.71 Aligned_cols=304 Identities=16% Similarity=0.236 Sum_probs=259.6
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
++|..|...-+|+.+++..... +.+|.+.|+++.|+.||.+||||+.+|.|+||+.+++... ......
T Consensus 80 aTGGgDD~AflW~~~~ge~~~e-----ltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~-------~~~~~e 147 (399)
T KOG0296|consen 80 ATGGGDDLAFLWDISTGEFAGE-----LTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQ-------WKLDQE 147 (399)
T ss_pred EecCCCceEEEEEccCCcceeE-----ecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceE-------EEeecc
Confidence 7888899999999999885544 4599999999999999999999999999999999874221 111134
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceE
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i 696 (879)
-..|.=++|+|. +..|+.|+.||.|-+|.+.++...+.+.+|..++++-.|.| +|+.+++|.+||+|++||..+++++
T Consensus 148 ~~dieWl~WHp~-a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~p-dGKr~~tgy~dgti~~Wn~ktg~p~ 225 (399)
T KOG0296|consen 148 VEDIEWLKWHPR-AHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIP-DGKRILTGYDDGTIIVWNPKTGQPL 225 (399)
T ss_pred cCceEEEEeccc-ccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccC-CCceEEEEecCceEEEEecCCCcee
Confidence 567888899994 99999999999999999998888888999999999999999 8999999999999999999999999
Q ss_pred EEEec--CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEc--------cCCCCEEEEEE---c-CCCEEEE
Q 002801 697 GTIKT--KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI--------GHNKTVSYVKF---V-DATTLVS 762 (879)
Q Consensus 697 ~~~~~--~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~--------~h~~~V~~v~f---s-~~~~l~s 762 (879)
..+.. +....++.++.. +..++.|+.++.+++-...+++. +.... .+...+.+|.| + .=.+.|+
T Consensus 226 ~~~~~~e~~~~~~~~~~~~-~~~~~~g~~e~~~~~~~~~sgKV-v~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~ 303 (399)
T KOG0296|consen 226 HKITQAEGLELPCISLNLA-GSTLTKGNSEGVACGVNNGSGKV-VNCNNGTVPELKPSQEELDESVESIPSSSKLPLAAC 303 (399)
T ss_pred EEecccccCcCCccccccc-cceeEeccCCccEEEEccccceE-EEecCCCCccccccchhhhhhhhhcccccccchhhc
Confidence 88873 455788899888 88999999999999999888874 44443 34445556655 3 5567889
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCC
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGP 842 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~ 842 (879)
|+-||+|.|||+... .++....|...|..+.|-+ ..||++++.||.|+.||.+++..+..+
T Consensus 304 G~vdG~i~iyD~a~~-------~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y----------- 364 (399)
T KOG0296|consen 304 GSVDGTIAIYDLAAS-------TLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTY----------- 364 (399)
T ss_pred ccccceEEEEecccc-------hhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEE-----------
Confidence 999999999999985 3455556888999999998 789999999999999999999877665
Q ss_pred CCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 843 ETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 843 ~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
.+|...|.+++.+|+.+ +++|++.|++.+||++
T Consensus 365 --~GH~~~Il~f~ls~~~~-~vvT~s~D~~a~VF~v 397 (399)
T KOG0296|consen 365 --TGHQMGILDFALSPQKR-LVVTVSDDNTALVFEV 397 (399)
T ss_pred --ecCchheeEEEEcCCCc-EEEEecCCCeEEEEec
Confidence 47889999999999999 9999999999999985
No 64
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=2.1e-32 Score=273.54 Aligned_cols=278 Identities=19% Similarity=0.348 Sum_probs=234.8
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEE
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (879)
Q Consensus 567 h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd 646 (879)
....|+|+.++ .+.+++|..|++|+|||.++... .....+|.+.|.|+.|. ...|++|+.|.+|+|||
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c-------~~~L~GHtGSVLCLqyd---~rviisGSSDsTvrvWD 263 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLEC-------LKILTGHTGSVLCLQYD---ERVIVSGSSDSTVRVWD 263 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHH-------HHhhhcCCCcEEeeecc---ceEEEecCCCceEEEEe
Confidence 46789999986 45789999999999999876322 22345799999999985 56999999999999999
Q ss_pred cCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEE---EE-ecCCceEEEEeeCCCCCEEEEEe
Q 002801 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIG---TI-KTKANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 647 ~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~---~~-~~~~~v~~v~~~p~~~~~l~tgs 722 (879)
+++++++.++-.|...|..+.|+. .+++|+|.|.++.+||+.+...+. .+ .|.+.|+.|.|+ .++++++|
T Consensus 264 v~tge~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd---~kyIVsAS 337 (499)
T KOG0281|consen 264 VNTGEPLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD---DKYIVSAS 337 (499)
T ss_pred ccCCchhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc---cceEEEec
Confidence 999999999999999999999974 699999999999999998765332 12 256789999997 56999999
Q ss_pred CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEe
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLS 802 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 802 (879)
.|.+|++|++.+... +.++.+|+..|.|+.| .+.+++|||.|++|++||+..+ .+++.+.||..-|.++.|
T Consensus 338 gDRTikvW~~st~ef-vRtl~gHkRGIAClQY-r~rlvVSGSSDntIRlwdi~~G------~cLRvLeGHEeLvRciRF- 408 (499)
T KOG0281|consen 338 GDRTIKVWSTSTCEF-VRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECG------ACLRVLEGHEELVRCIRF- 408 (499)
T ss_pred CCceEEEEeccceee-ehhhhcccccceehhc-cCeEEEecCCCceEEEEecccc------HHHHHHhchHHhhhheee-
Confidence 999999999999985 9999999999999988 5899999999999999999998 899999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 803 VWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 803 p~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
+++.|++|+.||+|+|||+......... ...+.-.....|++.|-.+.|. .- .+++++.|.+|-|||+.
T Consensus 409 -d~krIVSGaYDGkikvWdl~aaldpra~----~~~~Cl~~lv~hsgRVFrLQFD--~f-qIvsssHddtILiWdFl 477 (499)
T KOG0281|consen 409 -DNKRIVSGAYDGKIKVWDLQAALDPRAP----ASTLCLRTLVEHSGRVFRLQFD--EF-QIISSSHDDTILIWDFL 477 (499)
T ss_pred -cCceeeeccccceEEEEecccccCCccc----ccchHHHhhhhccceeEEEeec--ce-EEEeccCCCeEEEEEcC
Confidence 5789999999999999999865432111 1111112226789999999997 44 79999999999999973
No 65
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.98 E-value=2e-33 Score=299.57 Aligned_cols=199 Identities=21% Similarity=0.270 Sum_probs=170.2
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|+|++.++. .+ |...++++|.|||.| +|+++|... +.++++.++.|+.|++.||.|||+.+|+|||+||.
T Consensus 55 ~r~lkHpniv~m~e-sf--Et~~~~~vVte~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPq 129 (808)
T KOG0597|consen 55 LRSLKHPNIVEMLE-SF--ETSAHLWVVTEYAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQ 129 (808)
T ss_pred HHhcCCcchhhHHH-hh--cccceEEEEehhhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcc
Confidence 44578999998887 43 456689999999988 999999655 68999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||||...|.+|++|||+|+..+....
T Consensus 130 niLl~~~~~~KlcdFg~Ar~m~~~t~------------------------------------------------------ 155 (808)
T KOG0597|consen 130 NILLEKGGTLKLCDFGLARAMSTNTS------------------------------------------------------ 155 (808)
T ss_pred eeeecCCCceeechhhhhhhcccCce------------------------------------------------------
Confidence 99999999999999999987432100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
-.+..-|||.|||||++.+.+|+..+|+||||||||||++ |
T Consensus 156 ------------------------------------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PP 199 (808)
T KOG0597|consen 156 ------------------------------------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPP 199 (808)
T ss_pred ------------------------------------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCC
Confidence 1144689999999999999999999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|+...-......++.....+|. ..+..+..|+..+|.+||.+|.|..+++.|||.++
T Consensus 200 F~a~si~~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 200 FYARSITQLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG 256 (808)
T ss_pred chHHHHHHHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence 8766655555556665555555 66788999999999999999999999999999875
No 66
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.98 E-value=1.6e-29 Score=266.11 Aligned_cols=290 Identities=18% Similarity=0.275 Sum_probs=234.1
Q ss_pred cccCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 563 DLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~-~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
.+.||+..|++++|-|... .++||+.|++|.+|+=. ..++....-.|..-|.|+.|+|. ++.+++.+.||+
T Consensus 142 ei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGP-------PFKFk~s~r~HskFV~~VRysPD-G~~Fat~gsDgk 213 (603)
T KOG0318|consen 142 EITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGP-------PFKFKSSFREHSKFVNCVRYSPD-GSRFATAGSDGK 213 (603)
T ss_pred eeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCC-------CeeeeecccccccceeeEEECCC-CCeEEEecCCcc
Confidence 4556777777777766443 46777777777776522 22222333357778999999995 999999999999
Q ss_pred EEEEEcCCCeEEEEec---cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc----eEEEEeeCCC
Q 002801 642 VQVWDVSRSQVLTEMR---EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN----VCCVQFPLDS 714 (879)
Q Consensus 642 V~vwd~~~~~~~~~~~---~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~----v~~v~~~p~~ 714 (879)
|.+||-.+++.+..+. .|++.|..++|+| |+++|+|+|.|.+++|||+.+.+.+.++..... ...+-|.
T Consensus 214 i~iyDGktge~vg~l~~~~aHkGsIfalsWsP-Ds~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--- 289 (603)
T KOG0318|consen 214 IYIYDGKTGEKVGELEDSDAHKGSIFALSWSP-DSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--- 289 (603)
T ss_pred EEEEcCCCccEEEEecCCCCccccEEEEEECC-CCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe---
Confidence 9999999999999987 8999999999999 999999999999999999999999999986443 2333354
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccc------------
Q 002801 715 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRV------------ 781 (879)
Q Consensus 715 ~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~------------ 781 (879)
...|++.+.+|+|.+++..... ++.++.||.+.|+++..+ ++.+|+||+.||.|.-||..++....
T Consensus 290 kd~lItVSl~G~in~ln~~d~~-~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~ 368 (603)
T KOG0318|consen 290 KDHLITVSLSGTINYLNPSDPS-VLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKG 368 (603)
T ss_pred CCeEEEEEcCcEEEEecccCCC-hhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEE
Confidence 3478999999999999999998 799999999999999999 99999999999999999987643200
Q ss_pred --------------------------------------------------------------------------------
Q 002801 782 -------------------------------------------------------------------------------- 781 (879)
Q Consensus 782 -------------------------------------------------------------------------------- 781 (879)
T Consensus 369 ~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~ 448 (603)
T KOG0318|consen 369 MAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSA 448 (603)
T ss_pred EeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccce
Confidence
Q ss_pred --------------cC-------------CceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccC
Q 002801 782 --------------ID-------------TPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFN 834 (879)
Q Consensus 782 --------------~~-------------~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~ 834 (879)
.+ ........|..++++|++|||+.|||+|...+.|-+|++.+.+.....
T Consensus 449 vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~--- 525 (603)
T KOG0318|consen 449 VAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNR--- 525 (603)
T ss_pred EEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecce---
Confidence 00 001122347889999999999999999999999999999876542211
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 835 HADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 835 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
..=|...|.+|+|+|+.. ++|||+-|-+|.||++
T Consensus 526 ---------w~FHtakI~~~aWsP~n~-~vATGSlDt~Viiysv 559 (603)
T KOG0318|consen 526 ---------WAFHTAKINCVAWSPNNK-LVATGSLDTNVIIYSV 559 (603)
T ss_pred ---------eeeeeeeEEEEEeCCCce-EEEeccccceEEEEEc
Confidence 123678899999999999 9999999999999986
No 67
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.98 E-value=9.4e-30 Score=277.73 Aligned_cols=319 Identities=15% Similarity=0.257 Sum_probs=268.0
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccC-----------
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN----------- 602 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~----------- 602 (879)
+-+++|+.|-.+++|.....+- +....+.+|.+.|-++-|..|...+.|.+.||.|.+|.++..-.
T Consensus 158 r~l~~gsrD~s~rl~~v~~~k~---~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg 234 (893)
T KOG0291|consen 158 RLLVTGSRDLSARLFGVDGNKN---LFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEG 234 (893)
T ss_pred ceEEeccccceEEEEEeccccc---cceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccc
Confidence 5568889999999998877554 44455779999999999999999999999999999999872100
Q ss_pred ---------cCcccc---c---ceEEe-ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEE
Q 002801 603 ---------ENRDIH---Y---PVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSI 666 (879)
Q Consensus 603 ---------~~~~~~---~---~~~~~-~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv 666 (879)
.....+ + ....+ ....+++|.+|++. .+.|++|-..|...+|++....+++.+.-.+.+|..+
T Consensus 235 ~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~-t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~ 313 (893)
T KOG0291|consen 235 SDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKG-TNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTV 313 (893)
T ss_pred cccccccccchhhhcceEEEEEEeeeecccccceeeeeccCC-ceEEEEEecCCeeEEEecCCceEEEEeecccceeeEE
Confidence 000000 0 11111 23378999999984 7889999999999999999999999988778899999
Q ss_pred EEecCCCCEEEEEeCC-CcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEcc
Q 002801 667 DFSSADPTLLASGSDD-GSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG 744 (879)
Q Consensus 667 ~~sp~~~~~lasgs~D-g~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~ 744 (879)
.|+. .|..+|.|+.. |.+.||+..+...+...+.| ..++|++++|| |.++|+|+.||.|++||..++-+ ..+|..
T Consensus 314 ~~N~-tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpD-gq~iaTG~eDgKVKvWn~~SgfC-~vTFte 390 (893)
T KOG0291|consen 314 SFNS-TGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPD-GQLIATGAEDGKVKVWNTQSGFC-FVTFTE 390 (893)
T ss_pred Eecc-cCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCC-CcEEEeccCCCcEEEEeccCceE-EEEecc
Confidence 9998 89999998765 89999999998888777754 55999999999 89999999999999999999884 999999
Q ss_pred CCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCC-cEEEEEEecCCCEEEEEeCCC-cEEEEe
Q 002801 745 HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN-VKNFVGLSVWDGYVATGSETN-EVFVYH 821 (879)
Q Consensus 745 h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~-~v~~v~~sp~~~~lasgs~Dg-~v~vw~ 821 (879)
|.+.|+.+.|+ .++.++|+|-||+|+.||+... +.-++|..... ...||+..|.|..+.+|+.|. .|+||+
T Consensus 391 Hts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRY------rNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS 464 (893)
T KOG0291|consen 391 HTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRY------RNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWS 464 (893)
T ss_pred CCCceEEEEEEecCCEEEEeecCCeEEeeeeccc------ceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEE
Confidence 99999999999 9999999999999999999986 66778775432 356778888899888888875 599999
Q ss_pred cCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 822 KAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
+.+++.+..+ .+|.++|++++|+|.++ .|++++.|.+||+|+++
T Consensus 465 ~qTGqllDiL-------------sGHEgPVs~l~f~~~~~-~LaS~SWDkTVRiW~if 508 (893)
T KOG0291|consen 465 VQTGQLLDIL-------------SGHEGPVSGLSFSPDGS-LLASGSWDKTVRIWDIF 508 (893)
T ss_pred eecCeeeehh-------------cCCCCcceeeEEccccC-eEEeccccceEEEEEee
Confidence 9998766543 57899999999999999 99999999999999985
No 68
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1e-32 Score=296.11 Aligned_cols=211 Identities=17% Similarity=0.195 Sum_probs=169.8
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
++..++.-+||++|++|+.++. ++.++|..|||.||-....+-.-++.|.+.++..+++|+++||.|||+++|||||
T Consensus 79 EIeILa~CdHP~ivkLl~ayy~---enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRD 155 (1187)
T KOG0579|consen 79 EIEILAECDHPVIVKLLSAYYF---ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRD 155 (1187)
T ss_pred hhhhhhcCCChHHHHHHHHHhc---cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhh
Confidence 3445666789999999994443 3468999999999999998866678899999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||..|||++.+|.++++|||++......
T Consensus 156 LKAGNiL~TldGdirLADFGVSAKn~~t---------------------------------------------------- 183 (1187)
T KOG0579|consen 156 LKAGNILLTLDGDIRLADFGVSAKNKST---------------------------------------------------- 183 (1187)
T ss_pred ccccceEEEecCcEeeecccccccchhH----------------------------------------------------
Confidence 9999999999999999999987542100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHH
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLL 262 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil 262 (879)
. .+...++|||+|||||++. ..+|++++||||||++|
T Consensus 184 ---------------------------------~-----qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITL 225 (1187)
T KOG0579|consen 184 ---------------------------------R-----QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITL 225 (1187)
T ss_pred ---------------------------------H-----hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHH
Confidence 0 0224579999999999875 56799999999999999
Q ss_pred HHhhc--CCCCChhhHhHHhhhcccCCCch--hhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 263 FELFC--PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 263 ~ell~--pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
.||.- |....-...+.+-.+.....|.. +...+..+.+|+.+||.+||..||+++++|+||||......
T Consensus 226 IEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 226 IEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSN 298 (1187)
T ss_pred HHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcc
Confidence 99998 55555555555544444433322 22345678899999999999999999999999999976544
No 69
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=4.4e-33 Score=299.81 Aligned_cols=208 Identities=18% Similarity=0.165 Sum_probs=174.3
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
.+...++...||++|..+..+.++ +..++|+|+||+||+|.+.|++.+ ..+++..+..+|.||+.||.|||+.+|+|
T Consensus 52 ~E~~lis~~~hP~iv~y~ds~~~~--~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLH 129 (426)
T KOG0589|consen 52 QEMDLLSKLLHPNIVEYKDSFEED--GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLH 129 (426)
T ss_pred HHHHHHHhccCCCeeeeccchhcC--CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 344456778999999988843332 233899999999999999995443 67899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
||||++||+++.++.||+.|||+|+..+.+..
T Consensus 130 RDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~------------------------------------------------ 161 (426)
T KOG0589|consen 130 RDLKCANIFLTKDKKVKLGDFGLAKILNPEDS------------------------------------------------ 161 (426)
T ss_pred ccchhhhhhccccCceeecchhhhhhcCCchh------------------------------------------------
Confidence 99999999999999999999999998644410
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
....++||+.||+||++.+.+|+.++|||||||++|||
T Consensus 162 ------------------------------------------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm 199 (426)
T KOG0589|consen 162 ------------------------------------------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEM 199 (426)
T ss_pred ------------------------------------------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHH
Confidence 01336999999999999999999999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
++ +|...+.....+++.+. ...|.+...+.++..+|..||..+|..||++.++|.+|.+..
T Consensus 200 ~~lk~aF~a~~m~~Li~ki~~~-~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 200 CTLKPAFKASNMSELILKINRG-LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred HhcccccCccchHHHHHHHhhc-cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 99 66555555445544444 467777788899999999999999999999999999987754
No 70
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=3.2e-32 Score=298.42 Aligned_cols=201 Identities=21% Similarity=0.234 Sum_probs=168.5
Q ss_pred ecccc-cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 32 LTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~-~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+.+.. |+|++.++. ++++ ....|+|||+|.||.|++.|.+. . +++.++..+++||+.++.|||+.||+||||||
T Consensus 89 l~~l~~hpniv~l~~-~~e~--~~~~~lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKp 163 (382)
T KOG0032|consen 89 LQQLSGHPNIVQLKD-AFED--PDSVYLVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKP 163 (382)
T ss_pred HHhccCCCCEEEEEE-EEEc--CCeEEEEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCH
Confidence 33433 888888777 5544 34789999999999999999554 3 89999999999999999999999999999999
Q ss_pred cceeeccC----CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 111 SCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 111 ~NIll~~~----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
+|||+... +.+|++|||++......
T Consensus 164 EN~L~~~~~~~~~~ik~~DFGla~~~~~~--------------------------------------------------- 192 (382)
T KOG0032|consen 164 ENLLLASKDEGSGRIKLIDFGLAKFIKPG--------------------------------------------------- 192 (382)
T ss_pred HHeeeccccCCCCcEEEeeCCCceEccCC---------------------------------------------------
Confidence 99999633 47999999999764221
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell 266 (879)
......+||+.|+|||++.+.+|+..+||||+||++|.|+
T Consensus 193 ----------------------------------------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL 232 (382)
T KOG0032|consen 193 ----------------------------------------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILL 232 (382)
T ss_pred ----------------------------------------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHh
Confidence 0124469999999999999999999999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 267 C---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
+ ||............+... +..+.|...+..+.+||..||..||.+|+|+.++|+|||++..
T Consensus 233 ~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 233 SGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred hCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 9 887776555555555443 3457778889999999999999999999999999999999875
No 71
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-32 Score=287.46 Aligned_cols=215 Identities=17% Similarity=0.176 Sum_probs=166.5
Q ss_pred ccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcC
Q 002801 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 24 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
|+|... ++.-+|||++..++.+. ....+|+||.||.+||+.++++.. ...+++..+..|++++++||+|||.+|
T Consensus 72 ~kE~~~--msl~~HPNIv~~~~sFv---v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G 146 (516)
T KOG0582|consen 72 RKEVQT--MSLIDHPNIVTYHCSFV---VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG 146 (516)
T ss_pred HHHHHH--hhhcCCCCcceEEEEEE---ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 555443 34568999998777322 345689999999999999999542 224899999999999999999999999
Q ss_pred cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccc
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
-||||||+.||||+.+|.|||+|||....+-.. |
T Consensus 147 ~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~----G------------------------------------------ 180 (516)
T KOG0582|consen 147 HIHRDVKAGNILIDSDGTVKLADFGVSASLFDS----G------------------------------------------ 180 (516)
T ss_pred ceecccccccEEEcCCCcEEEcCceeeeeeccc----C------------------------------------------
Confidence 999999999999999999999999987543110 0
Q ss_pred cccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC--CCCCccCcchhHHH
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGV 260 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGv 260 (879)
.+. . .+...++||++|||||+++. ..|++|+||||||+
T Consensus 181 ------------~R~--------------------------~--~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGI 220 (516)
T KOG0582|consen 181 ------------DRQ--------------------------V--TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGI 220 (516)
T ss_pred ------------cee--------------------------e--EeeccccCcccccChHHhhhcccCccchhhhhhhhH
Confidence 000 0 01134699999999999754 35999999999999
Q ss_pred HHHHhhc---CCCCChhhHhHHhhhcccCCCc--------hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 261 il~ell~---pf~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
+..||.+ ||..-......+..+...+..+ ........+..+|..||.+||.+|||++++|.|+||+...
T Consensus 221 TA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 221 TACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred HHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 9999999 8876666666666666554311 1122344577999999999999999999999999998643
No 72
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.97 E-value=2.7e-30 Score=262.43 Aligned_cols=270 Identities=23% Similarity=0.405 Sum_probs=230.6
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCC---EEEEEeCCCcEEEEecCcccCcCcccccc
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE---LFAAAGVNKKIKVFECDAIINENRDIHYP 610 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~---~lat~~~dg~I~iwd~~~~~~~~~~~~~~ 610 (879)
.-.++|.+||.+++|+.+ ++.... +.||+++|.+++|.-... .|++|+.|.++++|.++.+.+.....+
T Consensus 116 ~~IltgsYDg~~riWd~~-Gk~~~~-----~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~-- 187 (423)
T KOG0313|consen 116 KWILTGSYDGTSRIWDLK-GKSIKT-----IVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALK-- 187 (423)
T ss_pred ceEEEeecCCeeEEEecC-CceEEE-----EecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHh--
Confidence 345899999999999865 444433 349999999988865333 599999999999999986443322222
Q ss_pred eEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCC-------------------------CeEEEEeccCCCcEEE
Q 002801 611 VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR-------------------------SQVLTEMREHERRVWS 665 (879)
Q Consensus 611 ~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~-------------------------~~~~~~~~~h~~~v~s 665 (879)
...+|...|-||+..+. +..+++|+.|.++.||+.++ ..++..+.+|+.+|.+
T Consensus 188 -~~~GHk~~V~sVsv~~s-gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~ 265 (423)
T KOG0313|consen 188 -VCRGHKRSVDSVSVDSS-GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSS 265 (423)
T ss_pred -HhcccccceeEEEecCC-CCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceee
Confidence 22379999999999884 99999999999999999321 1245667899999999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc--eeeEEEc
Q 002801 666 IDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK--IPLCTLI 743 (879)
Q Consensus 666 v~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~--~~~~~~~ 743 (879)
|.|++ ...+.++|.|.+|+.||+.++..+.++......+||.++|. .++|++|+.|..+++||.|++. .+..+|.
T Consensus 266 V~w~d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~-~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~ 342 (423)
T KOG0313|consen 266 VVWSD--ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPL-SKLLASGSSDRHIRLWDPRTGDGSVVSQSLI 342 (423)
T ss_pred EEEcC--CCceEeecccceEEEEEeecccceeeeecCcceeEeecccc-cceeeecCCCCceeecCCCCCCCceeEEeee
Confidence 99986 67899999999999999999999999999999999999998 8999999999999999999874 4567888
Q ss_pred cCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 744 GHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 744 ~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
+|+..|.+++|+ +...|++||.|+++++||+++.. .++..+.+|...|.++.|+ ++.+|++||.|+.|+|+.
T Consensus 343 gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k-----~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 343 GHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK-----APLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFK 416 (423)
T ss_pred cchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC-----CcceeeccCCceEEEEecc-CCceEEeccCcceEEEec
Confidence 999999999998 77889999999999999999972 4899999999999999997 577999999999999996
Q ss_pred c
Q 002801 822 K 822 (879)
Q Consensus 822 ~ 822 (879)
-
T Consensus 417 ~ 417 (423)
T KOG0313|consen 417 G 417 (423)
T ss_pred c
Confidence 4
No 73
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-33 Score=293.24 Aligned_cols=206 Identities=17% Similarity=0.198 Sum_probs=166.5
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
++..++..+++++...|+ .+.. +..++++||||.||++.+.|+.. ..+++.++.-|+++++.||.|||+++.+|||
T Consensus 61 ei~~Ls~~~~~~it~yyg-syl~--g~~LwiiMey~~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH~~~kiHrD 136 (467)
T KOG0201|consen 61 EISVLSQCDSPNITEYYG-SYLK--GTKLWIIMEYCGGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLHSEKKIHRD 136 (467)
T ss_pred HHHHHHhcCcchHHhhhh-heee--cccHHHHHHHhcCcchhhhhccC-CCCccceeeeehHHHHHHhhhhhhcceeccc
Confidence 444567777777766665 2222 34689999999999999999665 4569999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||+.|||+...|.||++|||++.+.....
T Consensus 137 IKaanil~s~~g~vkl~DfgVa~ql~~~~--------------------------------------------------- 165 (467)
T KOG0201|consen 137 IKAANILLSESGDVKLADFGVAGQLTNTV--------------------------------------------------- 165 (467)
T ss_pred ccccceeEeccCcEEEEecceeeeeechh---------------------------------------------------
Confidence 99999999999999999999986642210
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
.+...++||+.|||||++.+..|+.++||||||++.+||++
T Consensus 166 ---------------------------------------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~ 206 (467)
T KOG0201|consen 166 ---------------------------------------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAK 206 (467)
T ss_pred ---------------------------------------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhc
Confidence 01244699999999999998889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|.........++..+.+...|......++.+++|+..||.+||+.||+|.++|+|+|++.
T Consensus 207 GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 207 GEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred CCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 443444444444455555444444456677999999999999999999999999999986
No 74
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=2.3e-32 Score=300.20 Aligned_cols=204 Identities=18% Similarity=0.182 Sum_probs=162.2
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+...+|++++..++ .+. .....|+||||+.|++|.+++.+. +.+++.+++.|+.||+.||+|||++||+|||||
T Consensus 47 ~~l~~l~hp~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlk 122 (323)
T cd05571 47 RVLQNTRHPFLTALKY-SFQ--THDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLK 122 (323)
T ss_pred HHHHhCCCCCCCCEEE-EEE--cCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 3445667888877665 343 344689999999999999999654 578999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+||+|||+++.......
T Consensus 123 p~NIll~~~~~~kl~DfG~a~~~~~~~~---------------------------------------------------- 150 (323)
T cd05571 123 LENLMLDKDGHIKITDFGLCKEGISDGA---------------------------------------------------- 150 (323)
T ss_pred HHHEEECCCCCEEEeeCCCCcccccCCC----------------------------------------------------
Confidence 9999999999999999999864211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 151 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 192 (323)
T cd05571 151 --------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (323)
T ss_pred --------------------------------------cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCC
Confidence 0122478999999999999999999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||................. ..+...++.+.+||.+||+.||++|| ++.++++||||....
T Consensus 193 ~Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~ 258 (323)
T cd05571 193 LPFYNQDHEKLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN 258 (323)
T ss_pred CCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 8865544333222222221 22234668899999999999999999 899999999998753
No 75
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.7e-32 Score=262.61 Aligned_cols=202 Identities=17% Similarity=0.202 Sum_probs=169.6
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
+....+|.+|+|++..|+ ...|+. ..|+++||..+|+|...|.. ....+++..+..+++|++.||.|+|.++||||
T Consensus 72 EiEIqs~L~hpnilrlY~-~fhd~~--riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhR 148 (281)
T KOG0580|consen 72 EIEIQSHLRHPNILRLYG-YFHDSK--RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHR 148 (281)
T ss_pred eeEeecccCCccHHhhhh-heeccc--eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccC
Confidence 344578999999999888 555544 57999999999999999953 34569999999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||||+|+|++..|.+|++|||-+-....
T Consensus 149 diKpenlLlg~~~~lkiAdfGwsV~~p~---------------------------------------------------- 176 (281)
T KOG0580|consen 149 DIKPENLLLGSAGELKIADFGWSVHAPS---------------------------------------------------- 176 (281)
T ss_pred CCCHHHhccCCCCCeeccCCCceeecCC----------------------------------------------------
Confidence 9999999999999999999998743210
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell 266 (879)
.+....|||.-|.+||...+..++..+|+|++||+.||++
T Consensus 177 ----------------------------------------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yefl 216 (281)
T KOG0580|consen 177 ----------------------------------------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFL 216 (281)
T ss_pred ----------------------------------------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHH
Confidence 0234579999999999999999999999999999999999
Q ss_pred c---CCCCChhhHhHHhhhcc-cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 267 C---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
. ||.+.. .......++. ....| ...+..+++||.+||.++|.+|.+..|++.|||+..
T Consensus 217 vg~ppFes~~-~~etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 217 VGLPPFESQS-HSETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred hcCCchhhhh-hHHHHHHHHHccccCC--cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 8 887666 4444444443 33334 456788999999999999999999999999999864
No 76
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.9e-30 Score=250.36 Aligned_cols=244 Identities=24% Similarity=0.451 Sum_probs=214.7
Q ss_pred CCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEecCcccCcCcccccceE-EeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 566 NSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 566 ~h~~~V~~l~fspd-g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~-~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
.-.+.+..++|+++ ...+++|+.||.++|||..... .|+. ...|...|.++.|++.....+++++.||+|+
T Consensus 58 d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s-------~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiK 130 (311)
T KOG0277|consen 58 DTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPS-------KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIK 130 (311)
T ss_pred ecccceeEeeecCCCcceEEEEecCceEEEeccCCCC-------cchhHHHhhhhheEEeccccccceeEEeeccCCceE
Confidence 34678999999995 4578899999999999954311 1222 2358899999999998899999999999999
Q ss_pred EEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEe
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 644 vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs 722 (879)
+|+...++.+.++.+|...|....|+|..+++|+++|.|+++++||++....-..|..+ .++.|+.|+.-+.+.++||+
T Consensus 131 LW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~ 210 (311)
T KOG0277|consen 131 LWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGG 210 (311)
T ss_pred eecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecC
Confidence 99999999999999999999999999999999999999999999999876444446654 58999999998889999999
Q ss_pred CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEE
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~ 800 (879)
.|+.|++||+|+.+.|+..+.+|.-+|..|+|+ ....|+|+|.|-+++|||..... ..+.+...|+.-+..+.
T Consensus 211 vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d-----s~~e~~~~HtEFv~g~D 285 (311)
T KOG0277|consen 211 VDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQD-----SAIETVDHHTEFVCGLD 285 (311)
T ss_pred CCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccch-----hhhhhhhccceEEeccc
Confidence 999999999999999999999999999999998 67789999999999999998763 56777778888899999
Q ss_pred EecC-CCEEEEEeCCCcEEEEe
Q 002801 801 LSVW-DGYVATGSETNEVFVYH 821 (879)
Q Consensus 801 ~sp~-~~~lasgs~Dg~v~vw~ 821 (879)
||+. ..++|+++.|+.++||+
T Consensus 286 ws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 286 WSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred cccccCceeeecccccceeeec
Confidence 9986 55999999999999997
No 77
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=5.9e-32 Score=292.53 Aligned_cols=200 Identities=15% Similarity=0.105 Sum_probs=160.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. ++.+ ....|++|||+.|++|.+++... +.+++.+++.++.||+.||+|||++||+||||||
T Consensus 54 ~l~~l~hp~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp 129 (291)
T cd05612 54 VLKEVSHPFIIRLFW-TEHD--QRFLYMLMEYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKP 129 (291)
T ss_pred HHHhCCCCcHhhhHh-hhcc--CCeEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCH
Confidence 455667888888776 4433 34689999999999999999654 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.....
T Consensus 130 ~NIli~~~~~~kl~Dfg~~~~~~~~------------------------------------------------------- 154 (291)
T cd05612 130 ENILLDKEGHIKLTDFGFAKKLRDR------------------------------------------------------- 154 (291)
T ss_pred HHeEECCCCCEEEEecCcchhccCC-------------------------------------------------------
Confidence 9999999999999999998653110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 155 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~ 196 (291)
T cd05612 155 --------------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYP 196 (291)
T ss_pred --------------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 012368999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~ 329 (879)
||................. +.....++.+.+||.+||..||.+||+ +.++++||||+...
T Consensus 197 pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 261 (291)
T cd05612 197 PFFDDNPFGIYEKILAGKL--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD 261 (291)
T ss_pred CCCCCCHHHHHHHHHhCCc--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence 7765544333333322221 122234678899999999999999995 99999999998643
No 78
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=7.8e-32 Score=294.61 Aligned_cols=203 Identities=16% Similarity=0.172 Sum_probs=161.8
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+.+.+|++++..+. .+.+ ....|+||||+.|++|.+++.+. +.+++.+++.++.||+.||.|||++||+|||||
T Consensus 45 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlk 120 (312)
T cd05585 45 TVLAQVNCPFIVPLKF-SFQS--PEKLYLVLAFINGGELFHHLQRE-GRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120 (312)
T ss_pred HHHHhCCCCcEeceee-EEec--CCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 3455668888888766 4443 34689999999999999999654 568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+||+|||+++.......
T Consensus 121 p~Nili~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------------- 148 (312)
T cd05585 121 PENILLDYQGHIALCDFGLCKLNMKDDD---------------------------------------------------- 148 (312)
T ss_pred HHHeEECCCCcEEEEECcccccCccCCC----------------------------------------------------
Confidence 9999999999999999999864211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 149 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~ 190 (312)
T cd05585 149 --------------------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGL 190 (312)
T ss_pred --------------------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCC
Confidence 0122478999999999999899999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC---CHHHHhhcccccCC
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~evl~hp~~~~~ 328 (879)
||............+.... ..+...++.+.+|+.+||..||.+|| ++.+++.||||...
T Consensus 191 ~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 191 PPFYDENVNEMYRKILQEPL--RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCcCCCCHHHHHHHHHcCCC--CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 7765544333333333221 22234567899999999999999997 58999999999864
No 79
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=6e-31 Score=260.71 Aligned_cols=290 Identities=18% Similarity=0.270 Sum_probs=254.2
Q ss_pred CCCCCCCcccccccCCCCCCCCCccccccccccCCCccccccCCCCceecccccCceEEEeecCcEEEEEecc---cccc
Q 002801 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ---GDLL 565 (879)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~w~~~~~~~~~~l~~---~~l~ 565 (879)
.....+..+.|+.|||||.+. ++|+.||.|.+|++-++++..+++. ..++
T Consensus 208 IKFg~KSh~EcA~FSPDgqyL---------------------------vsgSvDGFiEVWny~~GKlrKDLkYQAqd~fM 260 (508)
T KOG0275|consen 208 IKFGQKSHVECARFSPDGQYL---------------------------VSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFM 260 (508)
T ss_pred eecccccchhheeeCCCCceE---------------------------eeccccceeeeehhccchhhhhhhhhhhccee
Confidence 344556678889999999988 8999999999999999999988873 3577
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vw 645 (879)
-+.++|.|+.|++|.+++|+|+.||+|+||.+.++.+..+ .+..|...|+|+.|+. +++.+++++.|.+|++.
T Consensus 261 Mmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRr------FdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiH 333 (508)
T KOG0275|consen 261 MMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRR------FDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIH 333 (508)
T ss_pred ecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHH------hhhhhccCeeEEEEcc-CcchhhcccccceEEEe
Confidence 8999999999999999999999999999999998655332 2235889999999998 48999999999999999
Q ss_pred EcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec---CCceEEEEeeCCCCCEEEEEe
Q 002801 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT---KANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 646 d~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~---~~~v~~v~~~p~~~~~l~tgs 722 (879)
-+.+|++++.+++|..-|+...|.+ +|+.++++|.||+|++|+..+.+++.+++. ...|++|..-|.+...++++.
T Consensus 334 GlKSGK~LKEfrGHsSyvn~a~ft~-dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN 412 (508)
T KOG0275|consen 334 GLKSGKCLKEFRGHSSYVNEATFTD-DGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN 412 (508)
T ss_pred ccccchhHHHhcCccccccceEEcC-CCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEc
Confidence 9999999999999999999999999 999999999999999999999999999985 445999999999889999999
Q ss_pred CCCeEEEEEcCCCceeeEEEcc-C--CCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEE
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIG-H--NKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNF 798 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~-h--~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~ 798 (879)
..++|+|.++... .+.++.. . .+..-+...+ .|+++.+.+.|+.++.|.+.++ ..-+++.-|...+..
T Consensus 413 rsntv~imn~qGQ--vVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG------~LE~tl~VhEkdvIG 484 (508)
T KOG0275|consen 413 RSNTVYIMNMQGQ--VVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSG------KLERTLPVHEKDVIG 484 (508)
T ss_pred CCCeEEEEeccce--EEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecC------ceeeeeecccccccc
Confidence 9999999998643 2666642 2 2344444555 9999999999999999999998 667888899999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEe
Q 002801 799 VGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 799 v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
++.+|..+.||+-++||.+++|.
T Consensus 485 l~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 485 LTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred cccCcccchhhhhcccchhhhcC
Confidence 99999999999999999999994
No 80
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.2e-32 Score=282.97 Aligned_cols=209 Identities=19% Similarity=0.208 Sum_probs=160.0
Q ss_pred eecccccccCCCCCCccccc-c-cccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 31 ELTHGDHLRNQGGLSGVCEN-E-AAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
.+....|+|+|......... + .....-+||||+ .-+|.+.++. .+..++.-+++-+..||++||.|||+.||+|
T Consensus 70 im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcH 148 (364)
T KOG0658|consen 70 IMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICH 148 (364)
T ss_pred HHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCccc
Confidence 34467788886654422221 1 233456899999 5689998863 3467899999999999999999999999999
Q ss_pred ccCCCcceeeccC-CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 106 HNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 106 rDlKP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
|||||+|+|++.+ |.+||||||.|+.+...+
T Consensus 149 RDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e------------------------------------------------ 180 (364)
T KOG0658|consen 149 RDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE------------------------------------------------ 180 (364)
T ss_pred CCCChheEEEcCCCCeEEeccCCcceeeccCC------------------------------------------------
Confidence 9999999999976 899999999998752220
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ 263 (879)
......-|..|+|||.+.|.. |+++.||||.||++.
T Consensus 181 -------------------------------------------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~a 217 (364)
T KOG0658|consen 181 -------------------------------------------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMA 217 (364)
T ss_pred -------------------------------------------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHH
Confidence 013357799999999999976 999999999999999
Q ss_pred Hhhc--CCCCChhhHhHHhhhccc-------------------CCC----c-----hhhccChhhHHHHHHhcCCCCCCC
Q 002801 264 ELFC--PFSTGEEKTRTMSSLRHR-------------------VLP----P-----QLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 264 ell~--pf~~~~~~~~~~~~~~~~-------------------~~~----~-----~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
||+- |.+.++.....+..+..- .+| . ......+++.+|+.++|..+|.+|
T Consensus 218 ELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R 297 (364)
T KOG0658|consen 218 ELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKR 297 (364)
T ss_pred HHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhc
Confidence 9998 777665443333222110 001 0 223456788999999999999999
Q ss_pred CCHHHHhhcccccCCcCc
Q 002801 314 PKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 314 pt~~evl~hp~~~~~~~~ 331 (879)
.++.|++.||||+++..+
T Consensus 298 ~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 298 LSALEALAHPFFDELRDP 315 (364)
T ss_pred CCHHHHhcchhhHHhhCc
Confidence 999999999999987655
No 81
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97 E-value=7.2e-32 Score=297.76 Aligned_cols=200 Identities=15% Similarity=0.091 Sum_probs=161.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+.||+|.+++.+. ..+++..+..++.||+.||+|||++||+||||||
T Consensus 84 ~l~~l~hp~Iv~~~~-~~~~--~~~~~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp 159 (340)
T PTZ00426 84 ILNYINHPFCVNLYG-SFKD--ESYLYLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKP 159 (340)
T ss_pred HHHhCCCCCCcceEE-EEEe--CCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCH
Confidence 445567888888776 5543 34689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.....
T Consensus 160 ~NILl~~~~~ikL~DFG~a~~~~~~------------------------------------------------------- 184 (340)
T PTZ00426 160 ENLLLDKDGFIKMTDFGFAKVVDTR------------------------------------------------------- 184 (340)
T ss_pred HHEEECCCCCEEEecCCCCeecCCC-------------------------------------------------------
Confidence 9999999999999999998653110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....+||+.|||||++.+..++.++|||||||+||||++
T Consensus 185 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~ 226 (340)
T PTZ00426 185 --------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCP 226 (340)
T ss_pred --------------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCC
Confidence 012478999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||................... +...++.+.+++.+||..||.+|+ +++++++||||....
T Consensus 227 Pf~~~~~~~~~~~i~~~~~~~--p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 227 PFYANEPLLIYQKILEGIIYF--PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID 291 (340)
T ss_pred CCCCCCHHHHHHHHhcCCCCC--CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 776554433333333222222 223457789999999999999995 899999999998754
No 82
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8e-32 Score=283.69 Aligned_cols=228 Identities=17% Similarity=0.219 Sum_probs=178.2
Q ss_pred ccccccccccccCCC-------CCcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC
Q 002801 4 RLLRGERFGVRGDDS-------NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK 76 (879)
Q Consensus 4 ~~~~~~~~~~~~~~~-------~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~ 76 (879)
.+..|+.++|+-.+. ....|.+.+.+ .-..|+|+|.+|. |- +.+..+|||+|+-+||+|++||-+..
T Consensus 39 HVFTGekVAVKviDKTKlD~~st~hlfqEVRCM---KLVQHpNiVRLYE-Vi--DTQTKlyLiLELGD~GDl~DyImKHe 112 (864)
T KOG4717|consen 39 HVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCM---KLVQHPNIVRLYE-VI--DTQTKLYLILELGDGGDLFDYIMKHE 112 (864)
T ss_pred hhcccceeEEEEecccccchhhhhHHHHHHHHH---HHhcCcCeeeeee-hh--cccceEEEEEEecCCchHHHHHHhhh
Confidence 356788888864322 22344444443 2346788888887 43 35667999999999999999997777
Q ss_pred CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee-ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCC
Q 002801 77 RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155 (879)
Q Consensus 77 ~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll-~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (879)
..+++..+++||+||+.|+.|+|...||||||||+|+++ ..-|.||++|||++..+.+.
T Consensus 113 ~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG-------------------- 172 (864)
T KOG4717|consen 113 EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG-------------------- 172 (864)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc--------------------
Confidence 789999999999999999999999999999999999876 56799999999998654211
Q ss_pred cchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccc
Q 002801 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 235 (879)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt 235 (879)
.+.+..||+
T Consensus 173 -----------------------------------------------------------------------~kL~TsCGS 181 (864)
T KOG4717|consen 173 -----------------------------------------------------------------------KKLTTSCGS 181 (864)
T ss_pred -----------------------------------------------------------------------chhhcccch
Confidence 123557999
Q ss_pred cceeccccccCCCCC-ccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCC
Q 002801 236 NWYASPEELAGAPVS-CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 236 ~~Y~aPE~~~~~~~~-~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (879)
..|-|||++.|..|+ +++||||||||||-|+| ||...++.+..-.++.-.. ..+...+.++++||..||..||.
T Consensus 182 LAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY--tvPshvS~eCrdLI~sMLvRdPk 259 (864)
T KOG4717|consen 182 LAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY--TVPSHVSKECRDLIQSMLVRDPK 259 (864)
T ss_pred hhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc--cCchhhhHHHHHHHHHHHhcCch
Confidence 999999999999985 57999999999999999 8866555444433333222 22234568899999999999999
Q ss_pred CCCCHHHHhhcccccCCcC
Q 002801 312 GRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 312 ~Rpt~~evl~hp~~~~~~~ 330 (879)
+|.+.+||..++|++....
T Consensus 260 kRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 260 KRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred hhccHHHHhccccccCCCC
Confidence 9999999999999986543
No 83
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=8.4e-32 Score=296.50 Aligned_cols=199 Identities=15% Similarity=0.131 Sum_probs=160.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+.|++|.+++.+. +.+++..+..++.||+.||+|||++||+||||||
T Consensus 71 ~l~~l~hp~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp 146 (329)
T PTZ00263 71 ILMELSHPFIVNMMC-SFQD--ENRVYFLLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKP 146 (329)
T ss_pred HHHhCCCCCCCcEEE-EEEc--CCEEEEEEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCH
Confidence 345568888888777 4443 34689999999999999999654 5689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.....
T Consensus 147 ~NIll~~~~~~kl~Dfg~~~~~~~~------------------------------------------------------- 171 (329)
T PTZ00263 147 ENLLLDNKGHVKVTDFGFAKKVPDR------------------------------------------------------- 171 (329)
T ss_pred HHEEECCCCCEEEeeccCceEcCCC-------------------------------------------------------
Confidence 9999999999999999998653110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.....||+.|+|||++.+..++.++|||||||+||||++
T Consensus 172 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~ 213 (329)
T PTZ00263 172 --------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYP 213 (329)
T ss_pred --------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCC
Confidence 012478999999999999889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~ 328 (879)
||....... ....+..... +.+...++.+.+||.+||..||.+||+ +++++.||||...
T Consensus 214 pf~~~~~~~-~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 214 PFFDDTPFR-IYEKILAGRL-KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred CCCCCCHHH-HHHHHhcCCc-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 776544333 3333333222 222235577899999999999999987 7999999999863
No 84
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=2.6e-29 Score=243.52 Aligned_cols=287 Identities=15% Similarity=0.246 Sum_probs=252.5
Q ss_pred cccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCC
Q 002801 561 QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (879)
Q Consensus 561 ~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg 640 (879)
...+.+|...|.+|+|+-+|..+|+|+.|+++++|++... .........+|.+.|-.++|+|...+.+++++.|.
T Consensus 13 ~r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~-----r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk 87 (313)
T KOG1407|consen 13 RRELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD-----RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDK 87 (313)
T ss_pred hHHhhhhhhcceEEEEcccCceeeecccCCceEEEEecch-----hhhhhhcccCCCcchhhheeCCCCCcceEEecCCc
Confidence 3456689999999999999999999999999999998864 12223344568889999999999899999999999
Q ss_pred cEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEE
Q 002801 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 641 ~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~t 720 (879)
+|++||+..+++...+....+.| -+.|+| ++++++.|+.|..|...|.++.+.+...+.+-.+.-++|+-+ +++++.
T Consensus 88 ~ir~wd~r~~k~~~~i~~~~eni-~i~wsp-~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~-nd~Ffl 164 (313)
T KOG1407|consen 88 TIRIWDIRSGKCTARIETKGENI-NITWSP-DGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNS-NDLFFL 164 (313)
T ss_pred eEEEEEeccCcEEEEeeccCcce-EEEEcC-CCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCC-CCEEEE
Confidence 99999999999998886555554 478999 999999999999999999999999988888888999999955 677777
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEE
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFV 799 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v 799 (879)
.+..|+|.|..-...+ |+..+++|.....||.|. +|++||+|+.|..+.+||+... .|++.+..+.-+|..+
T Consensus 165 t~GlG~v~ILsypsLk-pv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~EL------iC~R~isRldwpVRTl 237 (313)
T KOG1407|consen 165 TNGLGCVEILSYPSLK-PVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDEL------ICERCISRLDWPVRTL 237 (313)
T ss_pred ecCCceEEEEeccccc-cccccccCCcceEEEEECCCCceEeeccccceeeccChhHh------hhheeeccccCceEEE
Confidence 7778999999988777 699999999999999999 9999999999999999999986 8999999999999999
Q ss_pred EEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCC---------
Q 002801 800 GLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSS--------- 870 (879)
Q Consensus 800 ~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~D--------- 870 (879)
.||-+|++||+||+|..|-|=++.++..+..+. +.++...|+|+|+.. +||-+++|
T Consensus 238 SFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~--------------~~~~t~tVAWHPk~~-LLAyA~ddk~~d~~rea 302 (313)
T KOG1407|consen 238 SFSHDGRMLASASEDHFIDIAEVETGDRVWEIP--------------CEGPTFTVAWHPKRP-LLAYACDDKDGDSNREA 302 (313)
T ss_pred EeccCcceeeccCccceEEeEecccCCeEEEee--------------ccCCceeEEecCCCc-eeeEEecCCCCcccccc
Confidence 999999999999999999999999988877654 456789999999999 99988776
Q ss_pred CcEEEEE
Q 002801 871 GNIKILE 877 (879)
Q Consensus 871 g~I~vw~ 877 (879)
|++|+|-
T Consensus 303 g~vKiFG 309 (313)
T KOG1407|consen 303 GTVKIFG 309 (313)
T ss_pred ceeEEec
Confidence 6777764
No 85
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.97 E-value=7.2e-30 Score=267.71 Aligned_cols=291 Identities=18% Similarity=0.316 Sum_probs=235.7
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
.+.+|+..|.+++++|.|..|++|+.|-+|++||++........ +..+.......|.++.|++. ++.|++.+....+
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~--fr~l~P~E~h~i~sl~ys~T-g~~iLvvsg~aqa 238 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRS--FRQLQPCETHQINSLQYSVT-GDQILVVSGSAQA 238 (641)
T ss_pred eccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchh--hhccCcccccccceeeecCC-CCeEEEEecCcce
Confidence 35689999999999999999999999999999999874333222 33334445668999999995 8888877778999
Q ss_pred EEEEcCCCeEEEE------------eccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc-eEEEEec------CC
Q 002801 643 QVWDVSRSQVLTE------------MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV-SIGTIKT------KA 703 (879)
Q Consensus 643 ~vwd~~~~~~~~~------------~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~-~i~~~~~------~~ 703 (879)
+|+|-...+.+.. .++|...++|.+|+|.+...|+|++.||+++|||++..+ ....|++ .-
T Consensus 239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv 318 (641)
T KOG0772|consen 239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV 318 (641)
T ss_pred eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence 9999765444333 257999999999999888999999999999999997653 4445554 23
Q ss_pred ceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc--eeeEEEccCCC--CEEEEEEc-CCCEEEEEEcCCcEEEEecCCCc
Q 002801 704 NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK--IPLCTLIGHNK--TVSYVKFV-DATTLVSASTDNTLKLWDLSMCT 778 (879)
Q Consensus 704 ~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~--~~~~~~~~h~~--~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~ 778 (879)
++++++|+|+ +++||+|+.||.|.+||.++.. ...+.-.+|.. .|++|.|+ +|++|+|-+.|+++++||++..
T Consensus 319 ~~tsC~~nrd-g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~- 396 (641)
T KOG0772|consen 319 PVTSCAWNRD-GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQF- 396 (641)
T ss_pred CceeeecCCC-cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccc-
Confidence 4899999999 8899999999999999987653 22455568877 89999999 9999999999999999999987
Q ss_pred ccccCCceEEEeCCCC--cEEEEEEecCCCEEEEEeC------CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002801 779 SRVIDTPLHSFTGHTN--VKNFVGLSVWDGYVATGSE------TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF 850 (879)
Q Consensus 779 ~~~~~~~~~~~~~h~~--~v~~v~~sp~~~~lasgs~------Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 850 (879)
.+++....+-.+ .-+.++|||+.+.|+||.. .|.+++||..+-..++.+.+. ...
T Consensus 397 ----kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~-------------~aS 459 (641)
T KOG0772|consen 397 ----KKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS-------------TAS 459 (641)
T ss_pred ----ccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC-------------Cce
Confidence 467776665433 3467899999999999964 467999998877777776543 334
Q ss_pred EEEEEEeCCCCcEEEEEeCCCcEEEE
Q 002801 851 ISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 851 V~~v~~~p~~~~~l~s~~~Dg~I~vw 876 (879)
|..+.|+|.-+ .|.+++.||+++||
T Consensus 460 vv~~~WhpkLN-Qi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 460 VVRCLWHPKLN-QIFAGSGDGTAHVY 484 (641)
T ss_pred EEEEeecchhh-heeeecCCCceEEE
Confidence 89999999999 78888999999997
No 86
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=1.5e-31 Score=289.35 Aligned_cols=201 Identities=16% Similarity=0.180 Sum_probs=153.0
Q ss_pred ecccccccCCCCCCcccc---cccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 32 LTHGDHLRNQGGLSGVCE---NEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~---~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+|+|++..++ +|. .+....+|++|||+. ++|.+++... ...+++.+++.++.||+.||+|||++||+|||
T Consensus 58 l~~~~hpniv~~~~-~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~d 135 (290)
T cd07862 58 LETFEHPNVVRLFD-VCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD 135 (290)
T ss_pred hcccCCCCcceEEE-EEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence 34457888887766 543 123446899999996 5899998543 34589999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.+||+|||+++......
T Consensus 136 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------------- 164 (290)
T cd07862 136 LKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------------- 164 (290)
T ss_pred CCHHHEEEcCCCCEEEccccceEeccCCc---------------------------------------------------
Confidence 99999999999999999999986531110
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 165 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 204 (290)
T cd07862 165 ----------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 204 (290)
T ss_pred ----------------------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHc
Confidence 0122478999999999988889999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCC--C-----------------------chhhccChhhHHHHHHhcCCCCCCCCCHHHH
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVL--P-----------------------PQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~--~-----------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ev 319 (879)
||............+..... + ......++.+.+|+.+||+.||++|||+.|+
T Consensus 205 g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 284 (290)
T cd07862 205 RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 284 (290)
T ss_pred CCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHH
Confidence 56444332222222111000 0 0112345667899999999999999999999
Q ss_pred hhcccc
Q 002801 320 LQSEFL 325 (879)
Q Consensus 320 l~hp~~ 325 (879)
|+||||
T Consensus 285 l~hp~f 290 (290)
T cd07862 285 LSHPYF 290 (290)
T ss_pred hcCCCC
Confidence 999997
No 87
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=2.1e-29 Score=287.11 Aligned_cols=268 Identities=21% Similarity=0.381 Sum_probs=230.3
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
+++..++.+++|+..+.+. .+ ...+.+|...|++++|+||++++++|+.|++|+|||+... ........+|
T Consensus 175 ~~~~~~~~i~~~~~~~~~~--~~-~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~------~~~~~~l~gH 245 (456)
T KOG0266|consen 175 AAASSDGLIRIWKLEGIKS--NL-LRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDD------GRNLKTLKGH 245 (456)
T ss_pred EEccCCCcEEEeecccccc--hh-hccccccccceeeeEECCCCcEEEEecCCceEEEeeccCC------CeEEEEecCC
Confidence 7788899999999976662 11 1233689999999999999999999999999999998331 1122344589
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc--
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV-- 694 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~-- 694 (879)
...|+|++|+|. ++.+++|+.|++|+|||+.+++++..+.+|...|++++|++ ++++|++++.|+.|+|||+.++.
T Consensus 246 ~~~v~~~~f~p~-g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~-d~~~l~s~s~d~~i~vwd~~~~~~~ 323 (456)
T KOG0266|consen 246 STYVTSVAFSPD-GNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP-DGNLLVSASYDGTIRVWDLETGSKL 323 (456)
T ss_pred CCceEEEEecCC-CCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC-CCCEEEEcCCCccEEEEECCCCcee
Confidence 999999999997 59999999999999999999999999999999999999999 99999999999999999999998
Q ss_pred eEEEEec--CC-ceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEE---EEc-CCCEEEEEEcCC
Q 002801 695 SIGTIKT--KA-NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYV---KFV-DATTLVSASTDN 767 (879)
Q Consensus 695 ~i~~~~~--~~-~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v---~fs-~~~~l~s~s~D~ 767 (879)
++..+.. .. .+++++|+|+ +.++++++.|+.+++||++.... ...+.+|...+.++ .++ .+.++++|+.|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~fsp~-~~~ll~~~~d~~~~~w~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~ 401 (456)
T KOG0266|consen 324 CLKLLSGAENSAPVTSVQFSPN-GKYLLSASLDRTLKLWDLRSGKS-VGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDG 401 (456)
T ss_pred eeecccCCCCCCceeEEEECCC-CcEEEEecCCCeEEEEEccCCcc-eeeecccCCcceeEecccccCCCCeEEEEeCCc
Confidence 4555543 22 5899999999 89999999999999999999885 77888887754333 224 899999999999
Q ss_pred cEEEEecCCCcccccCCceEEEeCC-CCcEEEEEEecCCCEEEEEe--CCCcEEEEecC
Q 002801 768 TLKLWDLSMCTSRVIDTPLHSFTGH-TNVKNFVGLSVWDGYVATGS--ETNEVFVYHKA 823 (879)
Q Consensus 768 ~i~lwd~~~~~~~~~~~~~~~~~~h-~~~v~~v~~sp~~~~lasgs--~Dg~v~vw~~~ 823 (879)
.|.+||+.++ ..+..+.+| ...+..+.++|...++++++ .|+.+++|...
T Consensus 402 ~v~~~~~~s~------~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 402 SVYVWDSSSG------GILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred eEEEEeCCcc------chhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 9999999986 677888999 88899999999999999998 78999999653
No 88
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=8.9e-30 Score=272.36 Aligned_cols=239 Identities=21% Similarity=0.336 Sum_probs=223.2
Q ss_pred cCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCce
Q 002801 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVS 695 (879)
Q Consensus 616 ~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~ 695 (879)
+...|.|+.++|. ..+++++-++|.|.||+.+|...++.+.-..-+|.+..|-. -.+.+++|++|..|+||+.+++..
T Consensus 12 rSdRVKsVd~HPt-ePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfia-RknWiv~GsDD~~IrVfnynt~ek 89 (794)
T KOG0276|consen 12 RSDRVKSVDFHPT-EPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNTGEK 89 (794)
T ss_pred cCCceeeeecCCC-CceEEEeeecCeeEEEecccceeeeeeeecccchhhheeee-ccceEEEecCCceEEEEeccccee
Confidence 5678999999996 89999999999999999999999999998899999999998 889999999999999999999999
Q ss_pred EEEEecCCc-eEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEEEE
Q 002801 696 IGTIKTKAN-VCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLW 772 (879)
Q Consensus 696 i~~~~~~~~-v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~lw 772 (879)
+.+|..|+. |.|++.||. ..+++++|.|-+|++||-.+.-.+..+|.||...|.+|+|+ |.+.++|+|-|++|++|
T Consensus 90 V~~FeAH~DyIR~iavHPt-~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVW 168 (794)
T KOG0276|consen 90 VKTFEAHSDYIRSIAVHPT-LPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVW 168 (794)
T ss_pred eEEeeccccceeeeeecCC-CCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEE
Confidence 999997665 999999999 78999999999999999988876788999999999999998 99999999999999999
Q ss_pred ecCCCcccccCCceEEEeCCCCcEEEEEEecCC--CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002801 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD--GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF 850 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~--~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 850 (879)
.+... .+..++.||...|++|.+-+.| .||+||+.|.+|+|||..+..+++++ .+|.+-
T Consensus 169 slgs~------~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TL-------------eGHt~N 229 (794)
T KOG0276|consen 169 SLGSP------HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTL-------------EGHTNN 229 (794)
T ss_pred EcCCC------CCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHh-------------hccccc
Confidence 99986 7889999999999999998865 49999999999999999998887765 478899
Q ss_pred EEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 851 ISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 851 V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|+.++|+|.-+ +++||+.||++|||.
T Consensus 230 vs~v~fhp~lp-iiisgsEDGTvriWh 255 (794)
T KOG0276|consen 230 VSFVFFHPELP-IIISGSEDGTVRIWN 255 (794)
T ss_pred ceEEEecCCCc-EEEEecCCccEEEec
Confidence 99999999999 999999999999996
No 89
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=2.3e-31 Score=291.84 Aligned_cols=199 Identities=17% Similarity=0.215 Sum_probs=158.7
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..++ ++. ....+|+||||++|++|.+++.+. +.+++.+++.++.||+.||+|||++||+||||||+|||
T Consensus 53 ~~h~~iv~~~~-~~~--~~~~~~iv~Ey~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIl 128 (320)
T cd05590 53 RNHPFLTQLYC-CFQ--TPDRLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVL 128 (320)
T ss_pred cCCCchhceee-EEE--cCCEEEEEEcCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeE
Confidence 36888887776 333 344689999999999999999654 56899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.+||+|||+++.......
T Consensus 129 i~~~~~~kL~DfG~~~~~~~~~~--------------------------------------------------------- 151 (320)
T cd05590 129 LDHEGHCKLADFGMCKEGIFNGK--------------------------------------------------------- 151 (320)
T ss_pred ECCCCcEEEeeCCCCeecCcCCC---------------------------------------------------------
Confidence 99999999999999864211000
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
......||+.|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (320)
T cd05590 152 ---------------------------------TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA 198 (320)
T ss_pred ---------------------------------cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 0122478999999999998889999999999999999999 7765
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH------HHHhhcccccCCc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEPR 329 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~evl~hp~~~~~~ 329 (879)
................ .+...++.+.+|+.+||+.||.+||++ +++++||||....
T Consensus 199 ~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~ 260 (320)
T cd05590 199 ENEDDLFEAILNDEVV--YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELD 260 (320)
T ss_pred CCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCC
Confidence 5443333333222222 222356788999999999999999998 9999999998653
No 90
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.97 E-value=1.9e-31 Score=292.86 Aligned_cols=203 Identities=18% Similarity=0.189 Sum_probs=160.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|+||||++|++|..++.+. ..+++..++.++.||+.||+|||++||+||||||
T Consensus 48 ~l~~l~hp~i~~~~~-~~~~--~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp 123 (323)
T cd05595 48 VLQNTRHPFLTALKY-AFQT--HDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 123 (323)
T ss_pred HHHhCCCCCCcceee-EEec--CCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence 445567888877665 3433 34689999999999999998554 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.......
T Consensus 124 ~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------------------------------------------- 150 (323)
T cd05595 124 ENLMLDKDGHIKITDFGLCKEGISDGA----------------------------------------------------- 150 (323)
T ss_pred HHEEEcCCCCEEecccHHhccccCCCC-----------------------------------------------------
Confidence 999999999999999999864211100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 151 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~ 193 (323)
T cd05595 151 -------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193 (323)
T ss_pred -------------------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCC
Confidence 0012478999999999999899999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||.................. .+...++.+.+||.+||..||.+|| ++.++++||||....
T Consensus 194 Pf~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~ 258 (323)
T cd05595 194 PFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 258 (323)
T ss_pred CCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 88655433332222222211 2234568899999999999999998 899999999998753
No 91
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.97 E-value=2.1e-31 Score=293.14 Aligned_cols=202 Identities=18% Similarity=0.173 Sum_probs=159.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+. .....|+||||++|++|..++... +.+++.+++.++.||+.||+|||++||+||||||
T Consensus 48 ~l~~l~hp~iv~~~~-~~~--~~~~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp 123 (328)
T cd05593 48 VLKNTRHPFLTSLKY-SFQ--TKDRLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKL 123 (328)
T ss_pred HHHhCCCCCCcceEE-EEE--cCCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCH
Confidence 445567888877665 333 334689999999999999998554 5689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.......
T Consensus 124 ~NIll~~~~~~kL~DfG~~~~~~~~~~----------------------------------------------------- 150 (328)
T cd05593 124 ENLMLDKDGHIKITDFGLCKEGITDAA----------------------------------------------------- 150 (328)
T ss_pred HHeEECCCCcEEEecCcCCccCCCccc-----------------------------------------------------
Confidence 999999999999999999864211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 151 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~ 193 (328)
T cd05593 151 -------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193 (328)
T ss_pred -------------------------------------ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCC
Confidence 0122478999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~ 328 (879)
||................. +.+...++.+.+||.+||.+||.+|| ++.++++||||...
T Consensus 194 Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 194 PFYNQDHEKLFELILMEDI--KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CCCCCCHHHHHHHhccCCc--cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 7765443322222222221 22234567899999999999999997 89999999999864
No 92
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=6e-31 Score=263.16 Aligned_cols=273 Identities=18% Similarity=0.335 Sum_probs=230.3
Q ss_pred cccccCCCCceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCc
Q 002801 526 EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR 605 (879)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~ 605 (879)
..|+++. .++|..|++|++||..+..+.+. +.||++.|.|+.|+ .+.+++|+.|.+|+|||++++.....
T Consensus 203 lQYDD~k---iVSGlrDnTikiWD~n~~~c~~~-----L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~t 272 (499)
T KOG0281|consen 203 LQYDDEK---IVSGLRDNTIKIWDKNSLECLKI-----LTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNT 272 (499)
T ss_pred EEecchh---hhcccccCceEEeccccHHHHHh-----hhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhH
Confidence 3444442 37899999999999887766544 56999999999996 56999999999999999998655443
Q ss_pred ccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe---EEEEeccCCCcEEEEEEecCCCCEEEEEeCC
Q 002801 606 DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ---VLTEMREHERRVWSIDFSSADPTLLASGSDD 682 (879)
Q Consensus 606 ~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~---~~~~~~~h~~~v~sv~~sp~~~~~lasgs~D 682 (879)
. +.|...|..+.|+ ..++++++.|.++.|||+.... +.+.+.+|...|+.|+|+ .++++++|.|
T Consensus 273 l-------ihHceaVLhlrf~---ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd---~kyIVsASgD 339 (499)
T KOG0281|consen 273 L-------IHHCEAVLHLRFS---NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD---DKYIVSASGD 339 (499)
T ss_pred H-------hhhcceeEEEEEe---CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc---cceEEEecCC
Confidence 3 4578899999997 6899999999999999997654 334567999999999996 4699999999
Q ss_pred CcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEE
Q 002801 683 GSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLV 761 (879)
Q Consensus 683 g~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~ 761 (879)
.+|++|++.+++.+.++.. +..|.|+++. ++++++||.|.+|++||+..+.. +..+.||..-|.++.| +.+.++
T Consensus 340 RTikvW~~st~efvRtl~gHkRGIAClQYr---~rlvVSGSSDntIRlwdi~~G~c-LRvLeGHEeLvRciRF-d~krIV 414 (499)
T KOG0281|consen 340 RTIKVWSTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRF-DNKRIV 414 (499)
T ss_pred ceEEEEeccceeeehhhhcccccceehhcc---CeEEEecCCCceEEEEeccccHH-HHHHhchHHhhhheee-cCceee
Confidence 9999999999999999985 4569999886 78999999999999999999984 8999999999999999 577899
Q ss_pred EEEcCCcEEEEecCCCccc---ccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCc
Q 002801 762 SASTDNTLKLWDLSMCTSR---VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 828 (879)
Q Consensus 762 s~s~D~~i~lwd~~~~~~~---~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~ 828 (879)
||..||+|++||+...... ...-|+.++..|++.|..+.| |.-.|++++.|.+|-|||...+-+-
T Consensus 415 SGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 415 SGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred eccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCcc
Confidence 9999999999999886432 112367778889999999998 4678999999999999998765443
No 93
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97 E-value=1.8e-31 Score=290.66 Aligned_cols=209 Identities=16% Similarity=0.185 Sum_probs=156.2
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+...+|++++..++ ++.+ ....|+||||+. ++|.+++.+....+++.+++.++.||+.||+|||++||+|||
T Consensus 53 E~~~l~~l~h~niv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 128 (303)
T cd07869 53 EASLLKGLKHANIVLLHD-IIHT--KETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRD 128 (303)
T ss_pred HHHHHhhCCCCCcCeEEE-EEec--CCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 333455668888887766 4443 346899999995 688888866556789999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.+||+|||+++.......
T Consensus 129 lkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------------- 158 (303)
T cd07869 129 LKPQNLLISDTGELKLADFGLARAKSVPSH-------------------------------------------------- 158 (303)
T ss_pred CCHHHEEECCCCCEEECCCCcceeccCCCc--------------------------------------------------
Confidence 999999999999999999999864311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell 266 (879)
......||+.|+|||++.+. .++.++|||||||+||||+
T Consensus 159 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 198 (303)
T cd07869 159 ----------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMI 198 (303)
T ss_pred ----------------------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 00123679999999998764 4899999999999999999
Q ss_pred c---CCCCChhhHhHHhhhcc---c--------------C--------CCchh------hccChhhHHHHHHhcCCCCCC
Q 002801 267 C---PFSTGEEKTRTMSSLRH---R--------------V--------LPPQL------LLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~---~--------------~--------~~~~~------~~~~~~~~~li~~~L~~dP~~ 312 (879)
+ ||............+.. . . .+... ...++.+.+|+.+||+.||++
T Consensus 199 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~ 278 (303)
T cd07869 199 QGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKN 278 (303)
T ss_pred hCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchh
Confidence 9 77554322221111100 0 0 00000 012356789999999999999
Q ss_pred CCCHHHHhhcccccCCcC
Q 002801 313 RPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~~~ 330 (879)
|||+.|+++||||+....
T Consensus 279 R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 279 RLSAQAALSHEYFSDLPP 296 (303)
T ss_pred ccCHHHHhcCcccccCCh
Confidence 999999999999987654
No 94
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=2.4e-31 Score=287.36 Aligned_cols=202 Identities=15% Similarity=0.175 Sum_probs=153.0
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+...+|+|++..++ ++.+ ....|++|||+.| +|.+++......+++.+++.+++||+.||+|||++||+|||||
T Consensus 55 ~~l~~l~h~niv~~~~-~~~~--~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlk 130 (288)
T cd07871 55 SLLKNLKHANIVTLHD-IIHT--ERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLK 130 (288)
T ss_pred HHHHhCCCCCEeeEEE-EEcC--CCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 3455667888887766 4433 3468999999975 9999996655568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+|++|||+++.......
T Consensus 131 p~Nil~~~~~~~kl~DfG~~~~~~~~~~---------------------------------------------------- 158 (288)
T cd07871 131 PQNLLINEKGELKLADFGLARAKSVPTK---------------------------------------------------- 158 (288)
T ss_pred HHHEEECCCCCEEECcCcceeeccCCCc----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~- 267 (879)
......||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g 200 (288)
T cd07871 159 --------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATG 200 (288)
T ss_pred --------------------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhC
Confidence 0012367899999999876 458999999999999999999
Q ss_pred --CCCCChhhHhHHhhhc--cc------------------CCCc--------hhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 --PFSTGEEKTRTMSSLR--HR------------------VLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~--~~------------------~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.............. .. ..+. .....++++.+||.+||.+||.+|||++
T Consensus 201 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~ 280 (288)
T cd07871 201 RPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAE 280 (288)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHH
Confidence 6654433222211110 00 0000 0123456788999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
|+++||||
T Consensus 281 ~~l~hp~f 288 (288)
T cd07871 281 AALRHSYF 288 (288)
T ss_pred HHhcCCCC
Confidence 99999998
No 95
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.3e-29 Score=276.88 Aligned_cols=271 Identities=18% Similarity=0.302 Sum_probs=233.9
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
.-++.+.....+++++..+..+. -+.||...|.+++...+|.+||||++|+++.+|.++.... ........
T Consensus 337 ~~laVATNs~~lr~y~~~~~~c~------ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~---~~~~~a~~ 407 (775)
T KOG0319|consen 337 SHLAVATNSPELRLYTLPTSYCQ------IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCS---KSLCVAQA 407 (775)
T ss_pred ceEEEEeCCCceEEEecCCCceE------EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcc---hhhhhhhh
Confidence 33456677788888877776554 3459999999999777889999999999999998843211 11112233
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeE-----EE----EeccCCCcEEEEEEecCCCCEEEEEeCCCc
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV-----LT----EMREHERRVWSIDFSSADPTLLASGSDDGS 684 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~-----~~----~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~ 684 (879)
.+|...|.+++++......+++++.|+++++|++...+. .. ....|.+.|++|+++| +..++||||.|.+
T Consensus 408 ~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~-ndkLiAT~SqDkt 486 (775)
T KOG0319|consen 408 NGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAP-NDKLIATGSQDKT 486 (775)
T ss_pred cccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecC-CCceEEecccccc
Confidence 568999999999887789999999999999999976221 11 2246999999999999 8899999999999
Q ss_pred EEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEE
Q 002801 685 VKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVS 762 (879)
Q Consensus 685 V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s 762 (879)
++||++.+...+.++.. ...|.||.|+|. ...++|+|.|.+|+||.+.+..+ +.+|.||..+|..+.|. +++.|+|
T Consensus 487 aKiW~le~~~l~~vLsGH~RGvw~V~Fs~~-dq~laT~SgD~TvKIW~is~fSC-lkT~eGH~~aVlra~F~~~~~qliS 564 (775)
T KOG0319|consen 487 AKIWDLEQLRLLGVLSGHTRGVWCVSFSKN-DQLLATCSGDKTVKIWSISTFSC-LKTFEGHTSAVLRASFIRNGKQLIS 564 (775)
T ss_pred eeeecccCceEEEEeeCCccceEEEEeccc-cceeEeccCCceEEEEEecccee-eeeecCccceeEeeeeeeCCcEEEe
Confidence 99999999999999985 456999999999 78999999999999999999884 99999999999999998 9999999
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEec
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~ 822 (879)
++.||.|++|++++. .|+.++-.|.+.|+.++-++.+.+++||+.||.|.+|.=
T Consensus 565 ~~adGliKlWnikt~------eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD 618 (775)
T KOG0319|consen 565 AGADGLIKLWNIKTN------ECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKD 618 (775)
T ss_pred ccCCCcEEEEeccch------hhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeec
Confidence 999999999999997 899999999999999999999999999999999999964
No 96
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.97 E-value=3.3e-31 Score=285.81 Aligned_cols=205 Identities=13% Similarity=0.121 Sum_probs=159.0
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
..+.+.+|++++..+. .+.+ ....|++|||+.+++|..++.. ....+++..++.++.||+.||+|||++||+||||
T Consensus 52 ~il~~l~~~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~di 128 (285)
T cd05631 52 RILEKVNSRFVVSLAY-AYET--KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDL 128 (285)
T ss_pred HHHHhcCCCcEEEEEE-EEcc--CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCC
Confidence 3455667777777665 3433 3468999999999999988743 3346899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+|||++.++.+||+|||++.......
T Consensus 129 kp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 156 (285)
T cd05631 129 KPENILLDDRGHIRISDLGLAVQIPEGE---------------------------------------------------- 156 (285)
T ss_pred CHHHEEECCCCCEEEeeCCCcEEcCCCC----------------------------------------------------
Confidence 9999999999999999999986531100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.....+||..|+|||++.+..++.++|||||||+||||++
T Consensus 157 ---------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g 197 (285)
T cd05631 157 ---------------------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQG 197 (285)
T ss_pred ---------------------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhC
Confidence 0012378999999999999899999999999999999999
Q ss_pred --CCCCChhhH---hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCc
Q 002801 268 --PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (879)
Q Consensus 268 --pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~ 329 (879)
||....... .....+. ....+.....++.+.+|+.+||..||.+||+ ++++++||||....
T Consensus 198 ~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 198 QSPFRKRKERVKREEVDRRVK-EDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred CCCCCCCCcchhHHHHHHHhh-cccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 776543221 1111111 1112233345678899999999999999997 89999999998765
No 97
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=7.5e-31 Score=302.85 Aligned_cols=213 Identities=19% Similarity=0.211 Sum_probs=163.2
Q ss_pred CceeecccccccCCCCCCccccc-----ccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhh
Q 002801 28 DGVELTHGDHLRNQGGLSGVCEN-----EAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lH 99 (879)
+...+...+|++++......... +.....++||||+.+|+|.++|+. ....+++.++..|+.||+.||.|||
T Consensus 81 Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH 160 (496)
T PTZ00283 81 EVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH 160 (496)
T ss_pred HHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33344556777777654421111 111236899999999999999843 2356899999999999999999999
Q ss_pred hcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCc
Q 002801 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (879)
Q Consensus 100 s~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (879)
++||+||||||+||||+.++.+||+|||+++.........
T Consensus 161 ~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~---------------------------------------- 200 (496)
T PTZ00283 161 SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDD---------------------------------------- 200 (496)
T ss_pred hCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccccc----------------------------------------
Confidence 9999999999999999999999999999987642110000
Q ss_pred ccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHH
Q 002801 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (879)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (879)
.....+||+.|+|||++.+..++.++||||||
T Consensus 201 ------------------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlG 232 (496)
T PTZ00283 201 ------------------------------------------------VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLG 232 (496)
T ss_pred ------------------------------------------------ccccccCCcceeCHHHhCCCCCCcHHHHHHHH
Confidence 00224789999999999998999999999999
Q ss_pred HHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 260 vil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
|+||||++ ||...... ..+........++.+...++.+.+++.+||+.||.+||++.++++|||+....
T Consensus 233 vilyeLltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 233 VLLYELLTLKRPFDGENME-EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 99999999 77554433 33333333334444556778899999999999999999999999999987543
No 98
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=287.06 Aligned_cols=205 Identities=18% Similarity=0.211 Sum_probs=170.7
Q ss_pred cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhh
Q 002801 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 21 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lH 99 (879)
..|.+|.. .+....|+++|.+++ ||..+. .+||||||+..|+|.+||+. .+..++..+.+.++.|||+|++||.
T Consensus 246 ~~f~~Ea~--iMk~L~H~~lV~l~g-V~~~~~--piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe 320 (468)
T KOG0197|consen 246 EAFLREAQ--IMKKLRHEKLVKLYG-VCTKQE--PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE 320 (468)
T ss_pred hHHHHHHH--HHHhCcccCeEEEEE-EEecCC--ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH
Confidence 45665544 345567888888777 887644 58999999999999999976 5678999999999999999999999
Q ss_pred hcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCc
Q 002801 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (879)
Q Consensus 100 s~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (879)
++++|||||...|||++.++.+||+|||+|+..+.+....
T Consensus 321 s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~---------------------------------------- 360 (468)
T KOG0197|consen 321 SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA---------------------------------------- 360 (468)
T ss_pred hCCccchhhhhhheeeccCceEEEcccccccccCCCceee----------------------------------------
Confidence 9999999999999999999999999999999543332210
Q ss_pred ccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHH
Q 002801 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (879)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (879)
.....| ...|+|||.+..+.++.+|||||||
T Consensus 361 ----------------------------------------~~~~kf---------PIkWtAPEa~~~~~FS~kSDVWSFG 391 (468)
T KOG0197|consen 361 ----------------------------------------SEGGKF---------PIKWTAPEALNYGKFSSKSDVWSFG 391 (468)
T ss_pred ----------------------------------------cCCCCC---------CceecCHHHHhhCCcccccceeehh
Confidence 000111 2248899999999999999999999
Q ss_pred HHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 260 vil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
|+||||+| || ...........+..+..-|.+..+++.+.+++..||+.+|++|||++.+.
T Consensus 392 VlL~E~fT~G~~py-~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 392 VLLWELFTYGRVPY-PGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred hhHHHHhccCCCCC-CCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 99999999 55 66777788888888888888889999999999999999999999998553
No 99
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.97 E-value=1.5e-30 Score=266.72 Aligned_cols=288 Identities=19% Similarity=0.287 Sum_probs=239.9
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
+-.|.+.|..+.|-++...|+|||.|..|++|+......+. + -...+..+.|+.+.|.+. +.+++++++|+.++
T Consensus 171 ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~---~--~tLaGs~g~it~~d~d~~-~~~~iAas~d~~~r 244 (459)
T KOG0288|consen 171 LDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSEL---I--STLAGSLGNITSIDFDSD-NKHVIAASNDKNLR 244 (459)
T ss_pred hhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhh---h--hhhhccCCCcceeeecCC-CceEEeecCCCcee
Confidence 34788999999999999999999999999999987632111 1 111245678999999985 88888888999999
Q ss_pred EEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeC
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 644 vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~ 723 (879)
+|++...+...++.+|+..|+++.|.. ....+++|+.|.+|++||+....+.+++-..+.+..|..++ ..+++|..
T Consensus 245 ~Wnvd~~r~~~TLsGHtdkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~---~~~~SgH~ 320 (459)
T KOG0288|consen 245 LWNVDSLRLRHTLSGHTDKVTAAKFKL-SHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSI---SDVISGHF 320 (459)
T ss_pred eeeccchhhhhhhcccccceeeehhhc-cccceeeccccchhhhhhhhhhheeccccccccccceEecc---eeeeeccc
Confidence 999999999999999999999999987 55569999999999999999999999988888888888873 47899999
Q ss_pred CCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEe
Q 002801 724 DHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLS 802 (879)
Q Consensus 724 d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 802 (879)
|++|++||.|.... ......+. .|+++..+ ++..|++++.|.++.+.|+++..............+| ..+.+.||
T Consensus 321 DkkvRfwD~Rs~~~-~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~as--DwtrvvfS 396 (459)
T KOG0288|consen 321 DKKVRFWDIRSADK-TRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCAS--DWTRVVFS 396 (459)
T ss_pred ccceEEEeccCCce-eeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccccccc--ccceeEEC
Confidence 99999999999884 77777665 89999999 9999999999999999999997432111111122223 37889999
Q ss_pred cCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 803 VWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 803 p~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|++.|+|+||.||.|+||++.+++........+.. ..|++++|+|.|. .|++++.++.+.+|.
T Consensus 397 pd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~-----------~aI~s~~W~~sG~-~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 397 PDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSN-----------AAITSLSWNPSGS-GLLSADKQKAVTLWT 459 (459)
T ss_pred CCCceeeeccCCCcEEEEEccCceEEEEeccCCCC-----------cceEEEEEcCCCc-hhhcccCCcceEecC
Confidence 99999999999999999999998877766532221 2699999999999 899999999999994
No 100
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.97 E-value=2.5e-30 Score=270.41 Aligned_cols=268 Identities=19% Similarity=0.256 Sum_probs=234.5
Q ss_pred CCceecccccCceEEEeecC-cEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccce
Q 002801 533 RSGWINPFLEGLCKYLSFSK-LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (879)
Q Consensus 533 ~~~~~~~~~d~~i~~w~~~~-~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~ 611 (879)
..-+|+++.|+.|++|++-. .+++++ +.||..+|.+++|+++|..|++++.|+.|++||++++.. +
T Consensus 227 ~hLlLS~gmD~~vklW~vy~~~~~lrt-----f~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~--------~ 293 (503)
T KOG0282|consen 227 GHLLLSGGMDGLVKLWNVYDDRRCLRT-----FKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQV--------L 293 (503)
T ss_pred eeEEEecCCCceEEEEEEecCcceehh-----hhcchhhhhhhhccccCCeeeeeecceeeeeeccccceE--------E
Confidence 45568999999999999876 666655 459999999999999999999999999999999998643 2
Q ss_pred EEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 002801 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (879)
Q Consensus 612 ~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~ 691 (879)
..+.....+.|+.|+|.+.+.+++|+.|+.|+.||+++++.+.++..|-+.|.++.|-+ ++..+++.++|++++||+.+
T Consensus 294 ~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~-~g~rFissSDdks~riWe~~ 372 (503)
T KOG0282|consen 294 SRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVD-EGRRFISSSDDKSVRIWENR 372 (503)
T ss_pred EEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEcc-CCceEeeeccCccEEEEEcC
Confidence 33456678999999998779999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCceEEEEecC--CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc--eeeEEEccCCC--CEEEEEEc-CCCEEEEEE
Q 002801 692 QGVSIGTIKTK--ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK--IPLCTLIGHNK--TVSYVKFV-DATTLVSAS 764 (879)
Q Consensus 692 ~~~~i~~~~~~--~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~--~~~~~~~~h~~--~V~~v~fs-~~~~l~s~s 764 (879)
.+.++..+... -...|+..+|+ +++++.-+.|+.|.||.+...- .....|.||.. .-..+.|+ ||.+|++|+
T Consensus 373 ~~v~ik~i~~~~~hsmP~~~~~P~-~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGd 451 (503)
T KOG0282|consen 373 IPVPIKNIADPEMHTMPCLTLHPN-GKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGD 451 (503)
T ss_pred CCccchhhcchhhccCcceecCCC-CCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeec
Confidence 98887665532 23678999999 8899999999999999976532 22456788864 45778889 999999999
Q ss_pred cCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEe
Q 002801 765 TDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYH 821 (879)
Q Consensus 765 ~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~ 821 (879)
.||.+.+||.++. +.+..+++|..++..+.|+|... .+||||.||.|++|+
T Consensus 452 sdG~v~~wdwkt~------kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 452 SDGKVNFWDWKTT------KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred CCccEEEeechhh------hhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 9999999999987 78899999999999999999865 899999999999996
No 101
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.97 E-value=5.6e-31 Score=290.68 Aligned_cols=202 Identities=15% Similarity=0.189 Sum_probs=159.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. ++.+ ....||||||++|++|.+++... ..+++.+++.++.||+.||.|||++||+||||||
T Consensus 54 ~l~~~~h~~iv~~~~-~~~~--~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp 129 (333)
T cd05600 54 ILTTTKSEWLVKLLY-AFQD--DEYLYLAMEYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKP 129 (333)
T ss_pred HHHhCCCCCCccEEE-EEEc--CCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence 344556888887776 4433 44689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.....
T Consensus 130 ~Nil~~~~~~~kL~Dfg~a~~~~~~------------------------------------------------------- 154 (333)
T cd05600 130 ENFLIDASGHIKLTDFGLSKGIVTY------------------------------------------------------- 154 (333)
T ss_pred HHEEECCCCCEEEEeCcCCcccccc-------------------------------------------------------
Confidence 9999999999999999998653110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 155 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~ 196 (333)
T cd05600 155 --------------------------------------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFP 196 (333)
T ss_pred --------------------------------------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCC
Confidence 022478999999999999999999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--ccCCCchh----hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLR--HRVLPPQL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
||.............. .....+.. ...++.+.+|+.+||..+|.+||++.++++||||....
T Consensus 197 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~ 264 (333)
T cd05600 197 PFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVD 264 (333)
T ss_pred CCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCC
Confidence 7754433222221111 11111111 24567889999999999999999999999999998653
No 102
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=6.2e-31 Score=287.86 Aligned_cols=199 Identities=18% Similarity=0.235 Sum_probs=157.1
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..++ .+. .....|+||||+.|++|..++... ..+++.++..++.||+.||+|||++||+||||||+|||
T Consensus 53 ~~~~~i~~~~~-~~~--~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil 128 (316)
T cd05620 53 WENPFLTHLYC-TFQ--TKEHLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVM 128 (316)
T ss_pred cCCCCccCeeE-EEE--eCCEEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeE
Confidence 46777777666 333 344789999999999999999654 56899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.+||+|||+++......
T Consensus 129 ~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------------- 150 (316)
T cd05620 129 LDRDGHIKIADFGMCKENVFGD---------------------------------------------------------- 150 (316)
T ss_pred ECCCCCEEeCccCCCeecccCC----------------------------------------------------------
Confidence 9999999999999985421000
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
......+||+.|+|||++.+..++.++|||||||+||||++ ||..
T Consensus 151 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~ 198 (316)
T cd05620 151 --------------------------------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred --------------------------------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 00123478999999999999999999999999999999999 7765
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH-HHHhhcccccCCc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEPR 329 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~evl~hp~~~~~~ 329 (879)
.... .....+... .+......++++.+|+.+||+.||.+||++ +++++||||....
T Consensus 199 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 199 DDED-ELFESIRVD-TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred CCHH-HHHHHHHhC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 4433 222332222 122222356788999999999999999998 5888999998753
No 103
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=6.8e-31 Score=288.41 Aligned_cols=198 Identities=17% Similarity=0.209 Sum_probs=158.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ ++.+ ....|+||||++|++|..++.+. +.+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 54 ~hp~i~~~~~-~~~~--~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill 129 (321)
T cd05591 54 KHPFLTALHC-CFQT--KDRLFFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL 129 (321)
T ss_pred CCCCccceee-EEEc--CCeEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE
Confidence 6777777666 4433 34689999999999999998654 568999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++.......
T Consensus 130 ~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------------------- 151 (321)
T cd05591 130 DAEGHCKLADFGMCKEGILNGV---------------------------------------------------------- 151 (321)
T ss_pred CCCCCEEEeecccceecccCCc----------------------------------------------------------
Confidence 9999999999999864211000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
......||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~ 199 (321)
T cd05591 152 --------------------------------TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD 199 (321)
T ss_pred --------------------------------cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC
Confidence 0122478999999999998889999999999999999999 77655
Q ss_pred hhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-------CHHHHhhcccccCCc
Q 002801 273 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-------KMGELLQSEFLNEPR 329 (879)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-------t~~evl~hp~~~~~~ 329 (879)
................| ...++.+.+++.+||..||.+|| ++.++++||||....
T Consensus 200 ~~~~~~~~i~~~~~~~p--~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~ 261 (321)
T cd05591 200 NEDDLFESILHDDVLYP--VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID 261 (321)
T ss_pred CHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence 54443333333332222 23457889999999999999999 899999999997643
No 104
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=3.4e-31 Score=293.26 Aligned_cols=213 Identities=15% Similarity=0.165 Sum_probs=157.1
Q ss_pred CceeecccccccCCCCCCcccccc---cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
+...+...+|++++..++ ++... .....|++|||| +++|.+++... ..+++.+++.++.||+.||+|||++||+
T Consensus 49 E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 49 EIKLLRLLRHPDIVEIKH-IMLPPSRREFKDIYVVFELM-ESDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTANVF 125 (338)
T ss_pred HHHHHHhCCCCCEeeecc-eEeccCCCCCceEEEEEecC-CCCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 333455667888887766 44322 123579999999 46899999654 4689999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+|||++.++.+||+|||+++........
T Consensus 126 H~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~---------------------------------------------- 159 (338)
T cd07859 126 HRDLKPKNILANADCKLKICDFGLARVAFNDTPT---------------------------------------------- 159 (338)
T ss_pred cCCCCHHHeEECCCCcEEEccCccccccccccCc----------------------------------------------
Confidence 9999999999999999999999998653111000
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC--CCCCccCcchhHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLL 262 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvil 262 (879)
.......+||++|+|||++.+ ..++.++|||||||++
T Consensus 160 -----------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl 198 (338)
T cd07859 160 -----------------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 198 (338)
T ss_pred -----------------------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHH
Confidence 000122478999999999876 5689999999999999
Q ss_pred HHhhc---CCCCChhhHhH--H------------------------hhhcccCC---CchhhccChhhHHHHHHhcCCCC
Q 002801 263 FELFC---PFSTGEEKTRT--M------------------------SSLRHRVL---PPQLLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~--~------------------------~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP 310 (879)
|||++ ||......... + ..+..... ...+....+.+.+++.+||..||
T Consensus 199 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 278 (338)
T cd07859 199 AEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDP 278 (338)
T ss_pred HHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCc
Confidence 99999 66433221100 0 00111000 11123345678899999999999
Q ss_pred CCCCCHHHHhhcccccCCcC
Q 002801 311 SGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 311 ~~Rpt~~evl~hp~~~~~~~ 330 (879)
++|||++|+++||||+....
T Consensus 279 ~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 279 KDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred ccCCCHHHHhcCchhhhcCc
Confidence 99999999999999987554
No 105
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=4.1e-31 Score=304.99 Aligned_cols=207 Identities=18% Similarity=0.195 Sum_probs=165.2
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
...+...+|++++..++ .+.+ ....||||||++||+|.++|+. ...++++.++..++.||+.||+|||++||+|
T Consensus 116 ~~~l~~l~Hpniv~~~~-~~~~--~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH 192 (478)
T PTZ00267 116 LHCLAACDHFGIVKHFD-DFKS--DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMH 192 (478)
T ss_pred HHHHHhCCCCCEeEEEE-EEEE--CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 34566778999998887 4443 3468999999999999988742 2356899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+|||++.++.+||+|||+++........
T Consensus 193 rDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~----------------------------------------------- 225 (478)
T PTZ00267 193 RDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL----------------------------------------------- 225 (478)
T ss_pred CCcCHHhEEECCCCcEEEEeCcCceecCCcccc-----------------------------------------------
Confidence 999999999999999999999998754211000
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 226 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 264 (478)
T PTZ00267 226 -----------------------------------------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYEL 264 (478)
T ss_pred -----------------------------------------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHH
Confidence 001234789999999999998899999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
++ ||...... ..+..+.....++.....++.+.+||.+||.+||++||++.+++.|||+..
T Consensus 265 ~tg~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 265 LTLHRPFKGPSQR-EIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 99 77654433 333333333344444456788999999999999999999999999999864
No 106
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.9e-31 Score=283.37 Aligned_cols=223 Identities=19% Similarity=0.222 Sum_probs=166.7
Q ss_pred cCCCCCcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHH
Q 002801 15 GDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 94 (879)
Q Consensus 15 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~ 94 (879)
+|.+.-.+|+.|...+.-. ..|.+++-+|+. +-.+..+||||||- ..+|.++|++....++...++.|..|++.|
T Consensus 398 ~D~qtl~gy~nEI~lL~KL-kg~~~IIqL~DY---Ev~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~a 472 (677)
T KOG0596|consen 398 ADNQTLDGYRNEIALLNKL-KGHDKIIQLYDY---EVTDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLA 472 (677)
T ss_pred cCHHHHHHHHHHHHHHHHh-cCCceEEEEeee---eccCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHH
Confidence 3444445677776554333 355777777772 22345689999975 789999998776666666999999999999
Q ss_pred HHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccc
Q 002801 95 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (879)
Q Consensus 95 l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (879)
|.++|.+||||.||||.||||- .|.+||||||+|+....+...
T Consensus 473 V~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs------------------------------------ 515 (677)
T KOG0596|consen 473 VKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS------------------------------------ 515 (677)
T ss_pred HHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccc------------------------------------
Confidence 9999999999999999999985 589999999999876433111
Q ss_pred cCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-------
Q 002801 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------- 247 (879)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------- 247 (879)
+ ....++||+-|||||.+...
T Consensus 516 ----------------------I------------------------------~kdsQvGT~NYMsPEAl~~~~s~~~~~ 543 (677)
T KOG0596|consen 516 ----------------------I------------------------------VKDSQVGTVNYMSPEALTDMSSSRENG 543 (677)
T ss_pred ----------------------e------------------------------eeccccCcccccCHHHHhhccccccCC
Confidence 0 11236999999999998532
Q ss_pred ----CCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhccc---CCCchhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 248 ----PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 248 ----~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
..+.+|||||||||||+|+. ||..-.+....+..+... +..|..... .++.+++..||..||.+||++.
T Consensus 544 ~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~-~~li~~mK~CL~rdPkkR~si~ 622 (677)
T KOG0596|consen 544 KSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN-DELIDVMKCCLARDPKKRWSIP 622 (677)
T ss_pred CcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCc-hHHHHHHHHHHhcCcccCCCcH
Confidence 26789999999999999998 886555555555555443 112222221 2388999999999999999999
Q ss_pred HHhhcccccCCcCch
Q 002801 318 ELLQSEFLNEPRDSM 332 (879)
Q Consensus 318 evl~hp~~~~~~~~~ 332 (879)
++|+|||+.....+.
T Consensus 623 eLLqhpFl~~~~i~~ 637 (677)
T KOG0596|consen 623 ELLQHPFLQIQPIPV 637 (677)
T ss_pred HHhcCcccccccccc
Confidence 999999999754443
No 107
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97 E-value=7.5e-31 Score=293.06 Aligned_cols=239 Identities=15% Similarity=0.190 Sum_probs=160.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. .+.+ ....|||||||+||+|.+++.+. +.+++.+++.++.||+.||+|||++||+||||||
T Consensus 54 il~~~~~~~iv~~~~-~~~~--~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp 129 (363)
T cd05628 54 ILVEADSLWVVKMFY-SFQD--KLNLYLIMEFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKP 129 (363)
T ss_pred HHHhCCCCCcceEEE-EEec--CCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCH
Confidence 345567888887776 4433 44689999999999999999654 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++........... +. . .. ....++.....
T Consensus 130 ~NILi~~~~~vkL~DFGla~~~~~~~~~~~~-~~-----~-~~------------~~~~~~~~~~~-------------- 176 (363)
T cd05628 130 DNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY-RN-----L-NH------------SLPSDFTFQNM-------------- 176 (363)
T ss_pred HHeEECCCCCEEEeeccCccccccccccccc-cc-----c-cc------------ccccccccccc--------------
Confidence 9999999999999999999764321100000 00 0 00 00000000000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.. ........ ..........+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 177 ~~---------------------~~~~~~~~-~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 177 NS---------------------KRKAETWK-RNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred cc---------------------ccccchhh-hccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 00 00000000 000001123589999999999999999999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--ccCCCchhhccChhhHHHHHHhcCCCCC---CCCCHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPS---GRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~---~Rpt~~evl~hp~~~~~~ 329 (879)
||.............. .....|.....++.+.+||.+|+. +|. .||+++|+++||||....
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~ 300 (363)
T cd05628 235 PFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVD 300 (363)
T ss_pred CCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCC
Confidence 8865544333332222 112122223456788999998765 344 468999999999998754
No 108
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=2.4e-31 Score=292.57 Aligned_cols=203 Identities=18% Similarity=0.190 Sum_probs=159.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlK 109 (879)
.+...+|++++..+. .+. .....|+||||++|++|..++.+. ..+++.+++.++.||+.||+|||+ +||+|||||
T Consensus 48 ~l~~~~hp~i~~~~~-~~~--~~~~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDik 123 (325)
T cd05594 48 VLQNSRHPFLTALKY-SFQ--THDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK 123 (325)
T ss_pred HHHhCCCCCCCceEE-EEE--cCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence 345567888877665 333 234689999999999999998554 468999999999999999999998 799999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+||+|||+++.......
T Consensus 124 p~NIll~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------------- 151 (325)
T cd05594 124 LENLMLDKDGHIKITDFGLCKEGIKDGA---------------------------------------------------- 151 (325)
T ss_pred CCeEEECCCCCEEEecCCCCeecCCCCc----------------------------------------------------
Confidence 9999999999999999999864211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 152 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~ 193 (325)
T cd05594 152 --------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 193 (325)
T ss_pred --------------------------------------ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCC
Confidence 0012478999999999999889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||................. ..+...++.+.+|+.+||..||++|+ ++.++++||||....
T Consensus 194 ~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 259 (325)
T cd05594 194 LPFYNQDHEKLFELILMEEI--RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV 259 (325)
T ss_pred CCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence 7765443322222222211 12234568899999999999999996 899999999998743
No 109
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=1.9e-30 Score=257.19 Aligned_cols=287 Identities=17% Similarity=0.256 Sum_probs=243.3
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCccccc--ceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHY--PVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 565 ~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~--~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
++..+-+-|..|+|||++|++|++||.|.+|++.++... .+..+ .-..|-+...|.|++|+. +...+|+|+.||.|
T Consensus 210 Fg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlr-KDLkYQAqd~fMMmd~aVlci~FSR-DsEMlAsGsqDGkI 287 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLR-KDLKYQAQDNFMMMDDAVLCISFSR-DSEMLASGSQDGKI 287 (508)
T ss_pred cccccchhheeeCCCCceEeeccccceeeeehhccchhh-hhhhhhhhcceeecccceEEEeecc-cHHHhhccCcCCcE
Confidence 466778889999999999999999999999999875332 12222 223355778999999998 58999999999999
Q ss_pred EEEEcCCCeEEEEec-cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc-eEEEEeeCCCCCEEEE
Q 002801 643 QVWDVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN-VCCVQFPLDSGRSLAF 720 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~-~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~-v~~v~~~p~~~~~l~t 720 (879)
+||.+.+|+|++.|. .|++.|+|+.|+. |+..+.+++.|.+|+|.-+.+|++++.+..++. |+.+.|.++ |+++++
T Consensus 288 KvWri~tG~ClRrFdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~d-G~~iis 365 (508)
T KOG0275|consen 288 KVWRIETGQCLRRFDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDD-GHHIIS 365 (508)
T ss_pred EEEEEecchHHHHhhhhhccCeeEEEEcc-CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCC-CCeEEE
Confidence 999999999999996 8999999999999 999999999999999999999999999997655 999999999 999999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEc--cCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCC---C
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLI--GHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH---T 793 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~--~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h---~ 793 (879)
++.||+|++|+..+..+ +.+|+ +...+|+.+... +...++.+...++|.|-++.. +.+++|..- .
T Consensus 366 aSsDgtvkvW~~KtteC-~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG-------QvVrsfsSGkREg 437 (508)
T KOG0275|consen 366 ASSDGTVKVWHGKTTEC-LSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG-------QVVRSFSSGKREG 437 (508)
T ss_pred ecCCccEEEecCcchhh-hhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccc-------eEEeeeccCCccC
Confidence 99999999999999884 77776 345677777665 788899999999999988874 567777632 2
Q ss_pred CcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcE
Q 002801 794 NVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNI 873 (879)
Q Consensus 794 ~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I 873 (879)
+...+..+||.|+++.|.++|+.++.|.+.+++....+. -|..-|-.++-+|..+ +||+=+.||.+
T Consensus 438 GdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~-------------VhEkdvIGl~HHPHqN-llAsYsEDgll 503 (508)
T KOG0275|consen 438 GDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLP-------------VHEKDVIGLTHHPHQN-LLASYSEDGLL 503 (508)
T ss_pred CceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeee-------------cccccccccccCcccc-hhhhhcccchh
Confidence 344566799999999999999999999999887666554 3444588899999999 99999999999
Q ss_pred EEEE
Q 002801 874 KILE 877 (879)
Q Consensus 874 ~vw~ 877 (879)
|+|.
T Consensus 504 KLWk 507 (508)
T KOG0275|consen 504 KLWK 507 (508)
T ss_pred hhcC
Confidence 9995
No 110
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=9e-31 Score=286.60 Aligned_cols=199 Identities=17% Similarity=0.204 Sum_probs=157.6
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..++ ++. .....|+||||++|++|..+++.. ..+++.++..|+.||+.||.|||++||+||||||+|||
T Consensus 53 ~~hp~i~~~~~-~~~--~~~~~~lv~e~~~gg~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nil 128 (316)
T cd05592 53 WEHPFLTHLFC-TFQ--TKEHLFFVMEYLNGGDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVL 128 (316)
T ss_pred cCCCCccceee-EEE--cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeE
Confidence 47888877766 333 334689999999999999999654 46899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.+||+|||+++.......
T Consensus 129 l~~~~~~kL~Dfg~a~~~~~~~~--------------------------------------------------------- 151 (316)
T cd05592 129 LDKDGHIKIADFGMCKENMNGEG--------------------------------------------------------- 151 (316)
T ss_pred ECCCCCEEEccCcCCeECCCCCC---------------------------------------------------------
Confidence 99999999999999864211100
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~ 198 (316)
T cd05592 152 ---------------------------------KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred ---------------------------------ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCC
Confidence 0122478999999999999889999999999999999999 8765
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH-HHHhhcccccCCc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEPR 329 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~evl~hp~~~~~~ 329 (879)
........ .+... .+......+..+.+|+.+||..||.+||++ .++++||||....
T Consensus 199 ~~~~~~~~-~i~~~-~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05592 199 EDEDELFD-SILND-RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGID 255 (316)
T ss_pred CCHHHHHH-HHHcC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCC
Confidence 44433222 22221 222233456778999999999999999986 5888999998643
No 111
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.97 E-value=6.4e-31 Score=292.54 Aligned_cols=232 Identities=16% Similarity=0.198 Sum_probs=165.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. ++.+ ....|+||||+.|++|.+++.+. ..+++.+++.++.||+.||+|||++||+||||||
T Consensus 54 ~l~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp 129 (350)
T cd05573 54 ILADADSPWIVKLYY-SFQD--EEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKP 129 (350)
T ss_pred HHHhcCCCCccchhh-heec--CCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence 344556888877766 4433 34689999999999999999655 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++................ +. .. ..
T Consensus 130 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~----~~------~~--------------------------~~-- 171 (350)
T cd05573 130 DNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSH----NL------LF--------------------------RD-- 171 (350)
T ss_pred HHeEECCCCCEEeecCCCCccCcccCcccccccccc----cc------cc--------------------------cc--
Confidence 999999999999999999976533211100000000 00 00 00
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....................||+.|+|||++.+..++.++|||||||+||||++
T Consensus 172 -----------------------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~ 228 (350)
T cd05573 172 -----------------------NVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFP 228 (350)
T ss_pred -----------------------cccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCC
Confidence 000000000000111234579999999999999999999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--ccCCCchhhccChhhHHHHHHhcCCCCCCCCC-HHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~evl~hp~~~~~ 328 (879)
||.............. .....|.....++.+.+||.+||. ||.+||+ +.++++||||...
T Consensus 229 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 229 PFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred CCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 8866554333333222 222223333367889999999997 9999999 9999999999864
No 112
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=7.5e-31 Score=289.60 Aligned_cols=199 Identities=19% Similarity=0.196 Sum_probs=153.3
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..+. ++. .....|++|||+.|++|.+++.+. ..+++.+++.++.||+.||+|||++||+||||||+|||+
T Consensus 63 ~~~~i~~~~~-~~~--~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili 138 (332)
T cd05614 63 QSPFLVTLHY-AFQ--TEAKLHLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL 138 (332)
T ss_pred CCCCcccEEE-EEe--cCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE
Confidence 4666666554 333 334679999999999999999554 468999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++........
T Consensus 139 ~~~~~~kl~DfG~~~~~~~~~~~--------------------------------------------------------- 161 (332)
T cd05614 139 DSEGHVVLTDFGLSKEFLSEEKE--------------------------------------------------------- 161 (332)
T ss_pred CCCCCEEEeeCcCCccccccCCC---------------------------------------------------------
Confidence 99999999999998653111000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc---CCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
......||+.|+|||++.+.. ++.++|||||||+||||++ ||..
T Consensus 162 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 162 --------------------------------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred --------------------------------ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 012247899999999998754 8899999999999999999 7743
Q ss_pred Chh---hHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCC
Q 002801 272 GEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (879)
Q Consensus 272 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~ 328 (879)
... .......+.. ..++.....++.+.+++.+||..||++|| ++.++++||||+..
T Consensus 210 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 210 EGERNTQSEVSRRILK-CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred CCCCCCHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 221 1111111111 12233345667889999999999999999 78899999999864
No 113
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.97 E-value=9.5e-31 Score=282.58 Aligned_cols=203 Identities=17% Similarity=0.156 Sum_probs=153.1
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+...+|++++..++ ++.+ ....|+||||++++.|..+.+. ...+++..++.++.||+.||.|||+.||+|||||
T Consensus 52 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk 127 (287)
T cd07848 52 KMLRTLKQENIVELKE-AFRR--RGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIK 127 (287)
T ss_pred HHHHhCCCccccchhh-hEec--CCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 3445667888887766 4433 3468999999999877665533 3568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+||+|||+++........
T Consensus 128 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------------------- 156 (287)
T cd07848 128 PENLLISHNDVLKLCDFGFARNLSEGSNA--------------------------------------------------- 156 (287)
T ss_pred HHHEEEcCCCcEEEeeccCcccccccccc---------------------------------------------------
Confidence 99999999999999999998664211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 157 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~ 198 (287)
T cd07848 157 --------------------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQ 198 (287)
T ss_pred --------------------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCC
Confidence 0012468999999999998889999999999999999999
Q ss_pred -CCCCChhhHhHHhh--hccc------------------CCCc----------hhhccChhhHHHHHHhcCCCCCCCCCH
Q 002801 268 -PFSTGEEKTRTMSS--LRHR------------------VLPP----------QLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 268 -pf~~~~~~~~~~~~--~~~~------------------~~~~----------~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
||............ .... ..+. .....++.+.+|+.+||++||++|||+
T Consensus 199 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~ 278 (287)
T cd07848 199 PLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT 278 (287)
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCH
Confidence 66543322211110 0000 0000 011245668899999999999999999
Q ss_pred HHHhhcccc
Q 002801 317 GELLQSEFL 325 (879)
Q Consensus 317 ~evl~hp~~ 325 (879)
+|+++||||
T Consensus 279 ~~~l~hp~f 287 (287)
T cd07848 279 EQCLNHPAF 287 (287)
T ss_pred HHHhcCCCC
Confidence 999999998
No 114
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-31 Score=304.63 Aligned_cols=213 Identities=17% Similarity=0.207 Sum_probs=170.3
Q ss_pred CCcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhh
Q 002801 19 NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 98 (879)
Q Consensus 19 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~l 98 (879)
..+.||+|+++..........+ ... ++. .+..+|+||+|++||+|..+|.+-. ++++..++.|+..|+.||+.+
T Consensus 118 ~tA~F~EERDimv~~ns~Wiv~--Lhy-AFQ--D~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldsl 191 (1317)
T KOG0612|consen 118 ETACFREERDIMVFGNSEWIVQ--LHY-AFQ--DERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSL 191 (1317)
T ss_pred hHHHHHHHhHHHHcCCcHHHHH--HHH-Hhc--CccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHH
Confidence 4467899999765554333333 223 233 3557899999999999999997765 899999999999999999999
Q ss_pred hhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCC
Q 002801 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (879)
Q Consensus 99 Hs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (879)
|+.|+|||||||+||||+.+|++|++|||.|-.+..+ |.+
T Consensus 192 H~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d----G~V------------------------------------ 231 (1317)
T KOG0612|consen 192 HSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD----GTV------------------------------------ 231 (1317)
T ss_pred HhccceeccCCcceeEecccCcEeeccchhHHhcCCC----CcE------------------------------------
Confidence 9999999999999999999999999999999664322 110
Q ss_pred cccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc----C-CCCCccC
Q 002801 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA----G-APVSCAS 253 (879)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~-~~~~~~s 253 (879)
+....+|||-|.|||++. + +.|+..+
T Consensus 232 -------------------------------------------------~s~~aVGTPDYISPEvLqs~~~~~g~yG~ec 262 (1317)
T KOG0612|consen 232 -------------------------------------------------RSSVAVGTPDYISPEVLQSQGDGKGEYGREC 262 (1317)
T ss_pred -------------------------------------------------EeccccCCCCccCHHHHHhhcCCccccCCcc
Confidence 123469999999999995 2 4499999
Q ss_pred cchhHHHHHHHhhc---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccc
Q 002801 254 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFL 325 (879)
Q Consensus 254 DIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~ 325 (879)
|+||+||++|||++ ||+...-...+-.+..+. .-.|....+++.+.+||.+++. +|..|.. ++++..||||
T Consensus 263 DwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF 341 (1317)
T KOG0612|consen 263 DWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFF 341 (1317)
T ss_pred chhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccc
Confidence 99999999999998 998877666666666653 2233445688999999998876 5678877 9999999999
Q ss_pred cC
Q 002801 326 NE 327 (879)
Q Consensus 326 ~~ 327 (879)
.+
T Consensus 342 ~g 343 (1317)
T KOG0612|consen 342 EG 343 (1317)
T ss_pred cC
Confidence 64
No 115
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=9.3e-31 Score=288.21 Aligned_cols=198 Identities=17% Similarity=0.203 Sum_probs=155.1
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ ++.+ ....|++|||++|++|.+++.+. +.+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 54 ~hp~Iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili 129 (329)
T cd05588 54 NHPFLVGLHS-CFQT--ESRLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL 129 (329)
T ss_pred CCCCCCceEE-EEEc--CCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE
Confidence 6888887766 4443 34689999999999999998554 579999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++.......
T Consensus 130 ~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------------------- 151 (329)
T cd05588 130 DAEGHIKLTDYGMCKEGIRPGD---------------------------------------------------------- 151 (329)
T ss_pred CCCCCEEECcCccccccccCCC----------------------------------------------------------
Confidence 9999999999999864210000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 199 (329)
T cd05588 152 --------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 199 (329)
T ss_pred --------------------------------ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccc
Confidence 0122478999999999999899999999999999999999 77421
Q ss_pred h--------hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC------HHHHhhcccccCC
Q 002801 273 E--------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 328 (879)
Q Consensus 273 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~evl~hp~~~~~ 328 (879)
. ........+.... ...+...++.+.+++.+||..||.+||+ +.++++||||...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 200 GMSDNPDQNTEDYLFQVILEKQ-IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred cccccccccchHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 1 1111122222221 1222345678899999999999999987 7899999999764
No 116
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97 E-value=9e-31 Score=287.69 Aligned_cols=200 Identities=19% Similarity=0.164 Sum_probs=158.9
Q ss_pred cccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
...+|++++..+. .+. .....|++|||+.|++|..++.+. ..+++..++.++.||+.||+|||++||+||||||+|
T Consensus 51 ~~l~hp~iv~~~~-~~~--~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~N 126 (323)
T cd05575 51 KNVKHPFLVGLHY-SFQ--TADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPEN 126 (323)
T ss_pred hhCCCCCCCCeeE-EEE--eCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHH
Confidence 4567888888766 333 244689999999999999999654 578999999999999999999999999999999999
Q ss_pred eeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccc
Q 002801 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (879)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (879)
||++.++.+||+|||+++.......
T Consensus 127 Ill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------------- 151 (323)
T cd05575 127 ILLDSQGHVVLTDFGLCKEGIEHSK------------------------------------------------------- 151 (323)
T ss_pred eEECCCCcEEEeccCCCcccccCCC-------------------------------------------------------
Confidence 9999999999999999864211000
Q ss_pred cCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CC
Q 002801 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (879)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf 269 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ ||
T Consensus 152 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf 196 (323)
T cd05575 152 -----------------------------------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPF 196 (323)
T ss_pred -----------------------------------ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCC
Confidence 0122478999999999999899999999999999999999 77
Q ss_pred CCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH----HHHhhcccccCC
Q 002801 270 STGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (879)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~evl~hp~~~~~ 328 (879)
............+... . ......++.+.++|.+||+.||.+||++ .++++||||...
T Consensus 197 ~~~~~~~~~~~i~~~~-~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 197 YSRDTAEMYDNILNKP-L-RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCHHHHHHHHHcCC-C-CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 6544333222222221 1 1223456789999999999999999987 699999999864
No 117
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97 E-value=1.2e-30 Score=286.54 Aligned_cols=202 Identities=18% Similarity=0.217 Sum_probs=160.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+.|++|.+++.+. +.+++..+..++.||+.||+|||++||+||||||
T Consensus 53 il~~l~hp~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp 128 (323)
T cd05584 53 ILEAVKHPFIVDLIY-AFQT--GGKLYLILEYLSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKP 128 (323)
T ss_pred HHHhCCCCchhceee-EEec--CCeEEEEEeCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 345567888888776 3433 34689999999999999999654 5688999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.......
T Consensus 129 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------------- 155 (323)
T cd05584 129 ENILLDAQGHVKLTDFGLCKESIHEGT----------------------------------------------------- 155 (323)
T ss_pred HHeEECCCCCEEEeeCcCCeecccCCC-----------------------------------------------------
Confidence 999999999999999999864211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 156 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~ 198 (323)
T cd05584 156 -------------------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAP 198 (323)
T ss_pred -------------------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCC
Confidence 0012478999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~ 328 (879)
||............+. ... +.+...++.+.+||.+||..+|++|| ++.++++||||...
T Consensus 199 pf~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 199 PFTAENRKKTIDKILK-GKL-NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred CCCCCCHHHHHHHHHc-CCC-CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 7765443333222222 221 22234567899999999999999999 89999999999864
No 118
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=1e-30 Score=287.41 Aligned_cols=201 Identities=15% Similarity=0.151 Sum_probs=159.5
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+. .....|+||||+.|++|..++.. ..+++.+++.++.||+.||+|||++||+||||||+
T Consensus 56 ~~~l~hp~i~~~~~-~~~--~~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~ 130 (324)
T cd05589 56 ANSERHPFLVNLFA-CFQ--TEDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLD 130 (324)
T ss_pred ccccCCCChhceee-EEE--cCCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHH
Confidence 34567888888776 433 34468999999999999998854 46899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++.......
T Consensus 131 Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------------ 156 (324)
T cd05589 131 NLLLDTEGFVKIADFGLCKEGMGFGD------------------------------------------------------ 156 (324)
T ss_pred HeEECCCCcEEeCcccCCccCCCCCC------------------------------------------------------
Confidence 99999999999999999864211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....+||+.|+|||.+.+..++.++|||||||+||||++ |
T Consensus 157 ------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~p 200 (324)
T cd05589 157 ------------------------------------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESP 200 (324)
T ss_pred ------------------------------------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCC
Confidence 0122478999999999999889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
|.................. .+...++.+.++|.+||..||.+|| ++.++++||||....
T Consensus 201 f~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~ 264 (324)
T cd05589 201 FPGDDEEEVFDSIVNDEVR--YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDIN 264 (324)
T ss_pred CCCCCHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCC
Confidence 7654433332222222222 2234567889999999999999999 699999999998643
No 119
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.2e-28 Score=268.90 Aligned_cols=308 Identities=20% Similarity=0.305 Sum_probs=259.7
Q ss_pred ecccccCceEEEeecC-cEE--E-EEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceE
Q 002801 537 INPFLEGLCKYLSFSK-LRV--K-ADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~-~~~--~-~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~ 612 (879)
+..+.++++.++.+.. .+. . .....-++.||.+.|.+++|+.|...+++|+. +.|+||+..+.. .+.
T Consensus 338 lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~k--------ciR 408 (888)
T KOG0306|consen 338 LVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNRDTLK--------CIR 408 (888)
T ss_pred EEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCC-CcEEEEEccCcc--------eeE
Confidence 3337788888886654 111 1 12223456799999999999999888887665 699999988632 334
Q ss_pred EeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 002801 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (879)
Q Consensus 613 ~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~ 692 (879)
.+.+. -+.|.+|.|. ..++++|...|.+.+||+.....+.+++.|++.||+++.+| |+..+++||.|.+|++||..-
T Consensus 409 Ti~~~-y~l~~~Fvpg-d~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l 485 (888)
T KOG0306|consen 409 TITCG-YILASKFVPG-DRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKL 485 (888)
T ss_pred Eeccc-cEEEEEecCC-CceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecC-CCCceEEecCCcEEEEEeEEE
Confidence 44444 7888899984 89999999999999999999999999999999999999999 999999999999999999742
Q ss_pred -----C--ceE------EEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCC
Q 002801 693 -----G--VSI------GTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DAT 758 (879)
Q Consensus 693 -----~--~~i------~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~ 758 (879)
+ +.+ +++.-...|.|+.++|+ +++||++--|.+|++|-+.+.+. ..++.||.-+|.++..+ |+.
T Consensus 486 ~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spd-gk~LaVsLLdnTVkVyflDtlKF-flsLYGHkLPV~smDIS~DSk 563 (888)
T KOG0306|consen 486 VVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPD-GKLLAVSLLDNTVKVYFLDTLKF-FLSLYGHKLPVLSMDISPDSK 563 (888)
T ss_pred EeccCcccceeeeeccceEEeccccEEEEEEcCC-CcEEEEEeccCeEEEEEecceee-eeeecccccceeEEeccCCcC
Confidence 1 111 34445678999999999 99999999999999999999885 67788999999999999 999
Q ss_pred EEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCC
Q 002801 759 TLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADP 838 (879)
Q Consensus 759 ~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~ 838 (879)
+++|||.|..|++|-+.-+ .|-+++-+|...|.+|.|-|...++.+||-|+.|+-||-..-+.+..+
T Consensus 564 livTgSADKnVKiWGLdFG------DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L------- 630 (888)
T KOG0306|consen 564 LIVTGSADKNVKIWGLDFG------DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKL------- 630 (888)
T ss_pred eEEeccCCCceEEeccccc------hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheee-------
Confidence 9999999999999999887 788999999999999999999999999999999999987643333332
Q ss_pred CCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 839 LSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 839 ~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
++|..-|++++..|+|. ++++++.|.+|++|+.
T Consensus 631 ------~~H~~ev~cLav~~~G~-~vvs~shD~sIRlwE~ 663 (888)
T KOG0306|consen 631 ------DGHHSEVWCLAVSPNGS-FVVSSSHDKSIRLWER 663 (888)
T ss_pred ------ccchheeeeeEEcCCCC-eEEeccCCceeEeeec
Confidence 57888899999999999 9999999999999974
No 120
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97 E-value=1.1e-30 Score=292.04 Aligned_cols=204 Identities=15% Similarity=0.176 Sum_probs=159.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .+. .....|+||||++||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||
T Consensus 96 il~~~~h~~iv~~~~-~~~--~~~~~~lv~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp 170 (370)
T cd05596 96 IMAHANSEWIVQLHY-AFQ--DDKYLYMVMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 170 (370)
T ss_pred HHHhCCCCCcceEEE-EEe--cCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence 455678888888766 333 34468999999999999999954 3589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||++.........
T Consensus 171 ~NILl~~~~~~kL~DfG~~~~~~~~~~~---------------------------------------------------- 198 (370)
T cd05596 171 DNMLLDKSGHLKLADFGTCMKMDANGMV---------------------------------------------------- 198 (370)
T ss_pred HHEEEcCCCCEEEEeccceeeccCCCcc----------------------------------------------------
Confidence 9999999999999999998653211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC----CCCccCcchhHHHHHHHhh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~~sDIwSlGvil~ell 266 (879)
.....+||+.|+|||++.+. .++.++|||||||+||||+
T Consensus 199 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyell 241 (370)
T cd05596 199 -------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241 (370)
T ss_pred -------------------------------------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHH
Confidence 00224789999999998753 3789999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCC
Q 002801 267 C---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~ 328 (879)
+ ||............+... ...+.....+..+.+||.+||..+|.+ ||++.++++||||...
T Consensus 242 tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 242 VGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred hCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 9 776554433333332221 122333356788999999999999988 9999999999999863
No 121
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=1.2e-30 Score=281.80 Aligned_cols=201 Identities=19% Similarity=0.255 Sum_probs=151.1
Q ss_pred ecccccccCCCCCCccccc---ccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 32 LTHGDHLRNQGGLSGVCEN---EAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~---~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+.+.+|+|++..++ ++.+ +.....+++|||+.+ +|.+++... ...+++.+++.++.||+.||+|||++||+|||
T Consensus 56 l~~~~h~ni~~~~~-~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 133 (288)
T cd07863 56 LEAFDHPNIVRLMD-VCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 133 (288)
T ss_pred hhhcCCCCeeeeee-eeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 34457888887776 4432 223457999999975 899988543 34589999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.+||+|||+++......
T Consensus 134 ikp~Nili~~~~~~kl~dfg~~~~~~~~~--------------------------------------------------- 162 (288)
T cd07863 134 LKPENILVTSGGQVKLADFGLARIYSCQM--------------------------------------------------- 162 (288)
T ss_pred CCHHHEEECCCCCEEECccCccccccCcc---------------------------------------------------
Confidence 99999999999999999999986532110
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......||..|+|||++.+..++.++|||||||++|||++
T Consensus 163 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~ 202 (288)
T cd07863 163 ----------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 202 (288)
T ss_pred ----------------------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHh
Confidence 0012367899999999998889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcc------------------cCCC--------chhhccChhhHHHHHHhcCCCCCCCCCHHHH
Q 002801 268 --PFSTGEEKTRTMSSLRH------------------RVLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~------------------~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ev 319 (879)
|++........+..+.. .... .........+.+|+.+||++||.+|||+.|+
T Consensus 203 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~ 282 (288)
T cd07863 203 RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRA 282 (288)
T ss_pred CCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHH
Confidence 43333222221111100 0000 0112345567899999999999999999999
Q ss_pred hhcccc
Q 002801 320 LQSEFL 325 (879)
Q Consensus 320 l~hp~~ 325 (879)
+.||||
T Consensus 283 l~hp~f 288 (288)
T cd07863 283 LQHPFF 288 (288)
T ss_pred hcCCCC
Confidence 999998
No 122
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=6.3e-31 Score=289.06 Aligned_cols=202 Identities=17% Similarity=0.214 Sum_probs=156.7
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+.+..|++++..+.+.+. .....|+||||++|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+
T Consensus 54 l~~~~~~~~i~~~~~~~~--~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~ 130 (324)
T cd05587 54 LALPGKPPFLTQLHSCFQ--TMDRLYFVMEYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLD 130 (324)
T ss_pred HHhcCCCCceeeeEEEEE--cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHH
Confidence 344556555443432333 234689999999999999999654 46899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++.......
T Consensus 131 Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------------ 156 (324)
T cd05587 131 NVMLDAEGHIKIADFGMCKENIFGGK------------------------------------------------------ 156 (324)
T ss_pred HeEEcCCCCEEEeecCcceecCCCCC------------------------------------------------------
Confidence 99999999999999999854210000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ |
T Consensus 157 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~p 200 (324)
T cd05587 157 ------------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPP 200 (324)
T ss_pred ------------------------------------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCC
Confidence 0122478999999999999999999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH-----HHHhhcccccCC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~evl~hp~~~~~ 328 (879)
|................ +..+...++.+.+++.+||.+||.+|+++ .++++||||...
T Consensus 201 f~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 201 FDGEDEDELFQSIMEHN--VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred CCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 76554433333332222 22223456788999999999999999986 899999999864
No 123
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=1.4e-30 Score=285.06 Aligned_cols=199 Identities=19% Similarity=0.235 Sum_probs=157.9
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..++ ++.+ ....|++|||++|++|.+++.+. ..+++.++..++.||+.||.|||++||+||||||+|||
T Consensus 53 ~~hp~iv~~~~-~~~~--~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil 128 (316)
T cd05619 53 WEHPFLTHLYC-TFQT--KENLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNIL 128 (316)
T ss_pred cCCCcCcceEE-EEEe--CCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEE
Confidence 47888877776 4433 34689999999999999999654 56899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.+||+|||+++.......
T Consensus 129 ~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------------------- 151 (316)
T cd05619 129 LDTDGHIKIADFGMCKENMLGDA--------------------------------------------------------- 151 (316)
T ss_pred ECCCCCEEEccCCcceECCCCCC---------------------------------------------------------
Confidence 99999999999999854210000
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
......||+.|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~ 198 (316)
T cd05619 152 ---------------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred ---------------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC
Confidence 0122478999999999999889999999999999999999 7765
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHH-HHhhcccccCCc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEPR 329 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-evl~hp~~~~~~ 329 (879)
.... .....+.... +......+..+.+|+.+||+.||.+||++. ++++||||....
T Consensus 199 ~~~~-~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 199 HDEE-ELFQSIRMDN-PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred CCHH-HHHHHHHhCC-CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 4433 2233332221 112223567789999999999999999996 899999998754
No 124
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.97 E-value=1.1e-28 Score=250.72 Aligned_cols=282 Identities=20% Similarity=0.303 Sum_probs=234.1
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCC--CCeEEEeeCCC
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI--KSQIASSNFEG 640 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~l~s~~~dg 640 (879)
+.+-|.+.|.+|... +++|+||++||.++||+.... ......+|.++|.+++|...+ ...+++++.|.
T Consensus 100 ~~~~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk--------~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dq 169 (423)
T KOG0313|consen 100 QCFLHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGK--------SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQ 169 (423)
T ss_pred ccccchhhhhhhccc--CceEEEeecCCeeEEEecCCc--------eEEEEecCCcceeeeEEEecCCccceEEEecCCc
Confidence 345789999999988 789999999999999998752 233456799999999995432 23699999999
Q ss_pred cEEEEEcCCCeE----EEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCC-------------------------
Q 002801 641 VVQVWDVSRSQV----LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN------------------------- 691 (879)
Q Consensus 641 ~V~vwd~~~~~~----~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~------------------------- 691 (879)
++++|..+.+.. +..-.+|...|-+|+..+ ++..+++||.|..|+||+..
T Consensus 170 tl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~-sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~ 248 (423)
T KOG0313|consen 170 TLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDS-SGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGG 248 (423)
T ss_pred eEEEEEecCchhhhhHHhHhcccccceeEEEecC-CCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhccc
Confidence 999999877653 233358999999999999 99999999999999999932
Q ss_pred CCceEEEEe-cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcE
Q 002801 692 QGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTL 769 (879)
Q Consensus 692 ~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i 769 (879)
++.++.++. |..+|.+|.|++. ..+.+++.|++|+.||+.+++. ...+. -.++++++.++ ...+|++||.|..|
T Consensus 249 ~r~P~vtl~GHt~~Vs~V~w~d~--~v~yS~SwDHTIk~WDletg~~-~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~i 324 (423)
T KOG0313|consen 249 TRTPLVTLEGHTEPVSSVVWSDA--TVIYSVSWDHTIKVWDLETGGL-KSTLT-TNKSLNCISYSPLSKLLASGSSDRHI 324 (423)
T ss_pred ccCceEEecccccceeeEEEcCC--CceEeecccceEEEEEeecccc-eeeee-cCcceeEeecccccceeeecCCCCce
Confidence 124455555 4567999999984 6899999999999999999984 44443 35688999998 88999999999999
Q ss_pred EEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecCCCC-CceecccCCCCCCCCCCCCCC
Q 002801 770 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPM-PALSFNFNHADPLSGPETDDA 847 (879)
Q Consensus 770 ~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~~~~-~~~~~~~~~~~~~~~~~~~~h 847 (879)
++||-+++.. .....+|.||.+.|..|.|+|.+. .|++||.||++++||+++.+ |+..+ .+|
T Consensus 325 rl~DPR~~~g---s~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI-------------~~h 388 (423)
T KOG0313|consen 325 RLWDPRTGDG---SVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI-------------AGH 388 (423)
T ss_pred eecCCCCCCC---ceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceee-------------ccC
Confidence 9999999854 356789999999999999999876 68999999999999999876 66544 467
Q ss_pred CCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 848 AQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 848 ~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
...|.++.|+..+ .+++||.|.+|+|+.
T Consensus 389 ~DKvl~vdW~~~~--~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 389 NDKVLSVDWNEGG--LIVSGGADNKLRIFK 416 (423)
T ss_pred CceEEEEeccCCc--eEEeccCcceEEEec
Confidence 8889999998544 699999999999985
No 125
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=1.4e-30 Score=285.63 Aligned_cols=209 Identities=16% Similarity=0.147 Sum_probs=149.8
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC--------CCCCChhHHHHHHHHHHHHHHhhh
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--------~~~l~~~~~~~i~~qi~~~l~~lH 99 (879)
+...+.+.+|+|++..+. ++.+......|++|||+. ++|.+++... ...+++..++.|++||+.||+|||
T Consensus 48 E~~~l~~l~h~niv~~~~-~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH 125 (317)
T cd07868 48 EIALLRELKHPNVISLQK-VFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 125 (317)
T ss_pred HHHHHHhcCCCCCcceee-eEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 333456678888888776 554445556899999985 5888877321 235899999999999999999999
Q ss_pred hcCcccccCCCcceee----ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcccccccccc
Q 002801 100 SQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (879)
Q Consensus 100 s~givHrDlKP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (879)
++||+||||||+|||+ +..+.+||+|||+++........ .
T Consensus 126 ~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--~---------------------------------- 169 (317)
T cd07868 126 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--L---------------------------------- 169 (317)
T ss_pred hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc--c----------------------------------
Confidence 9999999999999999 45678999999999764221000 0
Q ss_pred CCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCc
Q 002801 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASD 254 (879)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sD 254 (879)
......+||++|+|||++.+. .++.++|
T Consensus 170 ---------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~D 198 (317)
T cd07868 170 ---------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAID 198 (317)
T ss_pred ---------------------------------------------------cccCCccccccccCCHHHcCCCCcCchhh
Confidence 001224789999999999875 4899999
Q ss_pred chhHHHHHHHhhc---CCCCChhhH--------hHHhhh---cc-------------------------cCCC-------
Q 002801 255 IYRLGVLLFELFC---PFSTGEEKT--------RTMSSL---RH-------------------------RVLP------- 288 (879)
Q Consensus 255 IwSlGvil~ell~---pf~~~~~~~--------~~~~~~---~~-------------------------~~~~------- 288 (879)
||||||++|||++ ||....... ..+..+ .. ....
T Consensus 199 iwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (317)
T cd07868 199 IWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKY 278 (317)
T ss_pred HHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccch
Confidence 9999999999999 664322110 000000 00 0000
Q ss_pred --chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 289 --PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 289 --~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
.......+.+.+||.+||+.||.+|||++|+|+||||
T Consensus 279 ~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 279 MEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0001123457799999999999999999999999998
No 126
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=1.3e-30 Score=286.93 Aligned_cols=199 Identities=18% Similarity=0.213 Sum_probs=155.1
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..++ ++.+ ....|+||||+.|++|..++.+. +.+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus 53 ~~hp~iv~~~~-~~~~--~~~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nil 128 (329)
T cd05618 53 SNHPFLVGLHS-CFQT--ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 128 (329)
T ss_pred CCCCcCCceee-EEEe--CCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEE
Confidence 37888888776 4433 34689999999999999988554 56899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.+||+|||+++.......
T Consensus 129 i~~~~~~kL~DfG~~~~~~~~~~--------------------------------------------------------- 151 (329)
T cd05618 129 LDSEGHIKLTDYGMCKEGLRPGD--------------------------------------------------------- 151 (329)
T ss_pred ECCCCCEEEeeCCccccccCCCC---------------------------------------------------------
Confidence 99999999999999864211000
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 152 ---------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ---------------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 0122478999999999999999999999999999999999 7742
Q ss_pred Ch--------hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC------HHHHhhcccccCC
Q 002801 272 GE--------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 328 (879)
Q Consensus 272 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~evl~hp~~~~~ 328 (879)
.. ........+... ....+...++.+.+|+.+||..||.+||+ +.++++||||...
T Consensus 199 ~~~~~~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 199 VGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCCcCCcccccHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 10 011111111111 11222345678899999999999999998 5899999999864
No 127
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-28 Score=239.60 Aligned_cols=293 Identities=17% Similarity=0.227 Sum_probs=238.2
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
+.||.-+++.|.|+.+|.+|.+|++|.++.||-...+ ++ .-...+|.+.|+|+..+.. ...+++|+.|.+++
T Consensus 6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nG---er----lGty~GHtGavW~~Did~~-s~~liTGSAD~t~k 77 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNG---ER----LGTYDGHTGAVWCCDIDWD-SKHLITGSADQTAK 77 (327)
T ss_pred cccCccccceEEecCCCcEEEEecCCCCceEEEecCC---ce----eeeecCCCceEEEEEecCC-cceeeeccccceeE
Confidence 5689999999999999999999999999999965332 11 1233679999999998864 88999999999999
Q ss_pred EEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCC-----CcEEEEeCC-------CCceEEEEec-CCceEEEEe
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD-----GSVKLWSIN-------QGVSIGTIKT-KANVCCVQF 710 (879)
Q Consensus 644 vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~D-----g~V~iwd~~-------~~~~i~~~~~-~~~v~~v~~ 710 (879)
+||+++|+++..++ ...+|..+.|++ ++++++.+.++ +.|.++|++ ...++..+.. .+.++.+-|
T Consensus 78 LWDv~tGk~la~~k-~~~~Vk~~~F~~-~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~W 155 (327)
T KOG0643|consen 78 LWDVETGKQLATWK-TNSPVKRVDFSF-GGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALW 155 (327)
T ss_pred EEEcCCCcEEEEee-cCCeeEEEeecc-CCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeee
Confidence 99999999999885 567999999999 88888877654 679999998 4456666664 566999999
Q ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEE
Q 002801 711 PLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF 789 (879)
Q Consensus 711 ~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~ 789 (879)
.|- +.+|++|..||.|.+||++++...+..-..|...|+.+.|+ +..+++|+|.|.+-++||+.+. .+++++
T Consensus 156 g~l-~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl------~v~Kty 228 (327)
T KOG0643|consen 156 GPL-GETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL------EVLKTY 228 (327)
T ss_pred ccc-CCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccce------eeEEEe
Confidence 999 89999999999999999999987677788899999999999 9999999999999999999987 778888
Q ss_pred eCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCC---CCCCCCCCEEEEEEeCCCCcEEEE
Q 002801 790 TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGP---ETDDAAQFISSVCWRGQSSNTLVA 866 (879)
Q Consensus 790 ~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~---~~~~h~~~V~~v~~~p~~~~~l~s 866 (879)
.. ..+||+.+++|...++++||.-..--|=-.....-...-+|-+. +... ...+|-++|++|+|+|+|. ..++
T Consensus 229 ~t-e~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~--i~eEEigrvkGHFGPINsvAfhPdGk-sYsS 304 (327)
T KOG0643|consen 229 TT-ERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHL--IFEEEIGRVKGHFGPINSVAFHPDGK-SYSS 304 (327)
T ss_pred ee-cccccceecccccceEEecCCceeeeeeeecccccchhhhHHHH--HHHHHhccccccccCcceeEECCCCc-cccc
Confidence 74 67899999999999888888654433322211111011111110 0001 1268999999999999999 9999
Q ss_pred EeCCCcEEEEE
Q 002801 867 ANSSGNIKILE 877 (879)
Q Consensus 867 ~~~Dg~I~vw~ 877 (879)
||.||.|++.-
T Consensus 305 GGEDG~VR~h~ 315 (327)
T KOG0643|consen 305 GGEDGYVRLHH 315 (327)
T ss_pred CCCCceEEEEE
Confidence 99999999974
No 128
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.1e-28 Score=272.73 Aligned_cols=284 Identities=17% Similarity=0.270 Sum_probs=244.4
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vw 645 (879)
.-++.|..++|+|....++++-.+|.|++||+.-+..... ...|.++|..|+|+|. ..+++||+.|-.|+||
T Consensus 7 skSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~r-------FdeHdGpVRgv~FH~~-qplFVSGGDDykIkVW 78 (1202)
T KOG0292|consen 7 SKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDR-------FDEHDGPVRGVDFHPT-QPLFVSGGDDYKIKVW 78 (1202)
T ss_pred cccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhh-------hhccCCccceeeecCC-CCeEEecCCccEEEEE
Confidence 3467899999999999999999999999999875322111 1348999999999995 9999999999999999
Q ss_pred EcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc-eEEEEeeCCCCCEEEEEeCC
Q 002801 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN-VCCVQFPLDSGRSLAFGSAD 724 (879)
Q Consensus 646 d~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~-v~~v~~~p~~~~~l~tgs~d 724 (879)
+..+.+++.++.+|-.-|..+.|++ .--.++|+|+|.+|+||+..+++++..+..|.- |.|.+|+|. ..+++++|-|
T Consensus 79 nYk~rrclftL~GHlDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhpt-EDlIVSaSLD 156 (1202)
T KOG0292|consen 79 NYKTRRCLFTLLGHLDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPT-EDLIVSASLD 156 (1202)
T ss_pred ecccceehhhhccccceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCc-cceEEEeccc
Confidence 9999999999999999999999999 667999999999999999999999999987655 999999998 7899999999
Q ss_pred CeEEEEEcCCCc----------------------------eeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecC
Q 002801 725 HRIYYYDLRNSK----------------------------IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLS 775 (879)
Q Consensus 725 ~~I~iwDl~~~~----------------------------~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~ 775 (879)
.+|++||+...+ .....+.||...|+.++|+ .-.+|+||+.|..|++|.++
T Consensus 157 QTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmn 236 (1202)
T KOG0292|consen 157 QTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 236 (1202)
T ss_pred ceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEec
Confidence 999999986421 0124567999999999999 77899999999999999998
Q ss_pred CCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEE
Q 002801 776 MCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVC 855 (879)
Q Consensus 776 ~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 855 (879)
..+. -.+.+..||.+.|.++-|+|....|++.|+|++|+|||+...+.+.+++-. .+.-+.++
T Consensus 237 etKa----WEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrre-------------ndRFW~la 299 (1202)
T KOG0292|consen 237 ETKA----WEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRE-------------NDRFWILA 299 (1202)
T ss_pred cccc----eeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeecc-------------CCeEEEEE
Confidence 7643 457788999999999999999999999999999999999988888877522 34578999
Q ss_pred EeCCCCcEEEEEeCCCcEEEEEe
Q 002801 856 WRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 856 ~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
-+|..+ |.+|+.|+-+-||.+
T Consensus 300 ahP~lN--LfAAgHDsGm~VFkl 320 (1202)
T KOG0292|consen 300 AHPELN--LFAAGHDSGMIVFKL 320 (1202)
T ss_pred ecCCcc--eeeeecCCceEEEEE
Confidence 999999 555666666667654
No 129
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97 E-value=4.3e-31 Score=291.32 Aligned_cols=204 Identities=15% Similarity=0.172 Sum_probs=158.9
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+.+ ....|+||||++|++|.+++++....+++..++.++.||+.||.|||++||+||||||+
T Consensus 55 ~~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~ 131 (330)
T cd05601 55 LSISNSPWIPQLQY-AFQD--KDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPE 131 (330)
T ss_pred HHhCCCCCCcceee-EEec--CCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchH
Confidence 34456777777665 4433 34689999999999999999766567999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++........
T Consensus 132 NIll~~~~~~kL~Dfg~a~~~~~~~~~----------------------------------------------------- 158 (330)
T cd05601 132 NVLIDRTGHIKLADFGSAARLTANKMV----------------------------------------------------- 158 (330)
T ss_pred heEECCCCCEEeccCCCCeECCCCCce-----------------------------------------------------
Confidence 999999999999999998654211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc------CCCCCccCcchhHHHHHHHh
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~~sDIwSlGvil~el 265 (879)
......||+.|+|||++. +..++.++|||||||+||||
T Consensus 159 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el 202 (330)
T cd05601 159 ------------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEM 202 (330)
T ss_pred ------------------------------------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeee
Confidence 001237899999999987 45588999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 266 FC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
++ ||............+... ...+.....++.+.+|+.+||. +|.+||++.++++||||...
T Consensus 203 ~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 203 IYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 99 886554433333222221 1122333456788999999998 99999999999999999864
No 130
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=9e-31 Score=293.97 Aligned_cols=209 Identities=16% Similarity=0.144 Sum_probs=156.0
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
...+...+|+|++..++ ++.. ....+++||++ +++|..++... +.+++.+++.|++||+.||+|||++|||||||
T Consensus 134 ~~il~~l~HpnIv~~~~-~~~~--~~~~~lv~e~~-~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDi 208 (391)
T PHA03212 134 AHILRAINHPSIIQLKG-TFTY--NKFTCLILPRY-KTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIHRDI 208 (391)
T ss_pred HHHHHhCCCCCCCCEeE-EEEE--CCeeEEEEecC-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 33456678899988776 4432 34679999999 47899888554 46899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+|||++..+.+||+|||+++........
T Consensus 209 KP~NIll~~~~~vkL~DFG~a~~~~~~~~~-------------------------------------------------- 238 (391)
T PHA03212 209 KAENIFINHPGDVCLGDFGAACFPVDINAN-------------------------------------------------- 238 (391)
T ss_pred ChHhEEEcCCCCEEEEeCCccccccccccc--------------------------------------------------
Confidence 999999999999999999998642110000
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 239 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg 279 (391)
T PHA03212 239 ---------------------------------------KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATC 279 (391)
T ss_pred ---------------------------------------ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence 0122478999999999999899999999999999999998
Q ss_pred --CCCCChh------hHhHHhhhc--------------------------c-cC-----CC--chhhccChhhHHHHHHh
Q 002801 268 --PFSTGEE------KTRTMSSLR--------------------------H-RV-----LP--PQLLLKFPKEASFCLWL 305 (879)
Q Consensus 268 --pf~~~~~------~~~~~~~~~--------------------------~-~~-----~~--~~~~~~~~~~~~li~~~ 305 (879)
||+.... ....+..+. . .. .+ ......+..+.+||.+|
T Consensus 280 ~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~m 359 (391)
T PHA03212 280 HDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKM 359 (391)
T ss_pred CCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHH
Confidence 5543211 000000000 0 00 00 01112345688999999
Q ss_pred cCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 306 LHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 306 L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
|..||.+|||+.|+|+||||.....+
T Consensus 360 L~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 360 LAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred hcCChhhCCCHHHHhcChhhccCCCC
Confidence 99999999999999999999876543
No 131
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.4e-27 Score=238.94 Aligned_cols=278 Identities=18% Similarity=0.264 Sum_probs=232.6
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeC--CCcEEE
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF--EGVVQV 644 (879)
Q Consensus 567 h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~--dg~V~v 644 (879)
..+.|+++.|+++|.++++++.|..|+|||..++..... ...++..+..++|... .+.++.++. |.+|+.
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~t-------i~skkyG~~~~~Fth~-~~~~i~sStk~d~tIry 84 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKT-------INSKKYGVDLACFTHH-SNTVIHSSTKEDDTIRY 84 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeE-------eecccccccEEEEecC-CceEEEccCCCCCceEE
Confidence 467899999999999999999999999999887433211 1224567889999775 444554444 889999
Q ss_pred EEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCC
Q 002801 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSAD 724 (879)
Q Consensus 645 wd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d 724 (879)
.++.+.+.++.|.+|.+.|++++.+| -+..|+|+|.|++|++||++..++...+...+. ..++|+|. |-++|++...
T Consensus 85 Lsl~dNkylRYF~GH~~~V~sL~~sP-~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~-pi~AfDp~-GLifA~~~~~ 161 (311)
T KOG1446|consen 85 LSLHDNKYLRYFPGHKKRVNSLSVSP-KDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR-PIAAFDPE-GLIFALANGS 161 (311)
T ss_pred EEeecCceEEEcCCCCceEEEEEecC-CCCeEEecccCCeEEeeEecCCCCceEEecCCC-cceeECCC-CcEEEEecCC
Confidence 99999999999999999999999999 669999999999999999999888877776554 35789999 8899999888
Q ss_pred CeEEEEEcCCC-ceeeEEEcc---CCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcE---
Q 002801 725 HRIYYYDLRNS-KIPLCTLIG---HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK--- 796 (879)
Q Consensus 725 ~~I~iwDl~~~-~~~~~~~~~---h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v--- 796 (879)
..|++||+|.. +-|..++.- .....+.|.|+ +|++|+.++..+.+++.|.-.+ ..+.++.++.+.-
T Consensus 162 ~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G------~~~~tfs~~~~~~~~~ 235 (311)
T KOG1446|consen 162 ELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDG------TVKSTFSGYPNAGNLP 235 (311)
T ss_pred CeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCC------cEeeeEeeccCCCCcc
Confidence 89999999986 456666653 36788999999 9999999999999999999988 5678888776644
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEE
Q 002801 797 NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 797 ~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw 876 (879)
....|+|++++|.+|+.||+|.+|++++++.+..+.- .+.++++++.|+|... ++||+++ .+-+|
T Consensus 236 ~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~------------~~~~~~~~~~fnP~~~-mf~sa~s--~l~fw 300 (311)
T KOG1446|consen 236 LSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRG------------PNGGPVSCVRFNPRYA-MFVSASS--NLVFW 300 (311)
T ss_pred eeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecC------------CCCCCccccccCCcee-eeeecCc--eEEEE
Confidence 4678999999999999999999999999998887751 2567799999999998 8888876 56666
No 132
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=1.3e-27 Score=254.73 Aligned_cols=265 Identities=28% Similarity=0.413 Sum_probs=229.1
Q ss_pred ceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEe
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 535 ~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
.++++..+|.+.+|+..+.+....+ ..|...+..+.|+|++++|++++.||.|++|++..... .....
T Consensus 23 ~l~~~~~~g~i~i~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~-------~~~~~ 90 (289)
T cd00200 23 LLATGSGDGTIKVWDLETGELLRTL-----KGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGEC-------VRTLT 90 (289)
T ss_pred EEEEeecCcEEEEEEeeCCCcEEEE-----ecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccc-------eEEEe
Confidence 3477777999999999887654443 36788899999999999999999999999999985311 11222
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV 694 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~ 694 (879)
.+...|.++.|++. +.++++++.||.|.+||+.+++....+..|...|.++.|+| ++.++++++.|+.|++||+++++
T Consensus 91 ~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~~~ 168 (289)
T cd00200 91 GHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP-DGTFVASSSQDGTIKLWDLRTGK 168 (289)
T ss_pred ccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC-cCCEEEEEcCCCcEEEEEccccc
Confidence 46678999999985 77888888899999999999998888888999999999999 78888888889999999999988
Q ss_pred eEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEE
Q 002801 695 SIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLW 772 (879)
Q Consensus 695 ~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lw 772 (879)
.+..+..+ ..+.++.|+|+ ++.+++++.|+.|++||++..+ ++..+..|...+.++.|+ ++.++++++.|+.|++|
T Consensus 169 ~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~ 246 (289)
T cd00200 169 CVATLTGHTGEVNSVAFSPD-GEKLLSSSSDGTIKLWDLSTGK-CLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVW 246 (289)
T ss_pred cceeEecCccccceEEECCC-cCEEEEecCCCcEEEEECCCCc-eecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 88888754 47999999999 7788888889999999999876 477777899999999999 77888888889999999
Q ss_pred ecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
|+... .++..+.+|...+.+++|+|++.+|++++.|+.|++|+
T Consensus 247 ~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 247 DLRTG------ECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EcCCc------eeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 99875 66777888999999999999999999999999999996
No 133
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=1.4e-30 Score=280.37 Aligned_cols=199 Identities=17% Similarity=0.078 Sum_probs=158.4
Q ss_pred CceeecccccccCCCCCCccccc--ccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giv 104 (879)
+...+...+|+|++..++ ++.+ +.....+++|||+.||+|.+++.+. ..+++.....++.|++.||.|||+ .+++
T Consensus 68 E~~~l~~l~h~nIv~~~g-~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 145 (283)
T PHA02988 68 EIKNLRRIDSNNILKIYG-FIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNKP 145 (283)
T ss_pred HHHHHHhcCCCCEEEEee-eEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCCCC
Confidence 334555667888887776 5544 3345679999999999999999664 578999999999999999999998 4999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+|||++.++.+|++|||+++.....
T Consensus 146 Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~------------------------------------------------- 176 (283)
T PHA02988 146 YKNLTSVSFLVTENYKLKIICHGLEKILSSP------------------------------------------------- 176 (283)
T ss_pred CCcCChhhEEECCCCcEEEcccchHhhhccc-------------------------------------------------
Confidence 9999999999999999999999998653111
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC--CCCCccCcchhHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLL 262 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvil 262 (879)
....+||..|+|||++.+ ..++.++|||||||++
T Consensus 177 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil 212 (283)
T PHA02988 177 --------------------------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVL 212 (283)
T ss_pred --------------------------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHH
Confidence 011367889999999976 5799999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|||++ ||............+.....++.+...++.+.+|+.+||+.||.+|||+.++++
T Consensus 213 ~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 213 WEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 99999 887655444333333333333433456788999999999999999999999985
No 134
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=1e-30 Score=291.99 Aligned_cols=203 Identities=16% Similarity=0.192 Sum_probs=157.2
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+.+ ....|+||||++||+|.++++.. .+++.+++.++.||+.||+|||++||+||||||+
T Consensus 97 ~~~~~hp~iv~~~~-~~~~--~~~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~ 171 (370)
T cd05621 97 MAFANSPWVVQLFC-AFQD--DKYLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPD 171 (370)
T ss_pred HHhCCCCCEeeEEE-EEEc--CCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHH
Confidence 44567888888776 4433 44689999999999999999543 5899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++........
T Consensus 172 NILl~~~~~~kL~DFG~a~~~~~~~~~----------------------------------------------------- 198 (370)
T cd05621 172 NMLLDKHGHLKLADFGTCMKMDETGMV----------------------------------------------------- 198 (370)
T ss_pred HEEECCCCCEEEEecccceecccCCce-----------------------------------------------------
Confidence 999999999999999998653211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC----CCccCcchhHHHHHHHhhc
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvil~ell~ 267 (879)
.....+||+.|+|||++.+.. ++.++|||||||+||||++
T Consensus 199 ------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~ 242 (370)
T cd05621 199 ------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV 242 (370)
T ss_pred ------------------------------------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHh
Confidence 012247899999999997643 7899999999999999999
Q ss_pred ---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~ 328 (879)
||................ ...|.....+..+.+++.+||..+|.+ |+++.|+++||||+..
T Consensus 243 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 243 GDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred CCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 886554433333333222 122333345778899999999865544 8999999999999863
No 135
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.97 E-value=1.3e-30 Score=292.99 Aligned_cols=251 Identities=16% Similarity=0.211 Sum_probs=163.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ...+|+||||++||+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||
T Consensus 54 il~~l~h~~iv~l~~-~~~~--~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp 129 (381)
T cd05626 54 ILAEADNEWVVKLYY-SFQD--KDNLYFVMDYIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKP 129 (381)
T ss_pred HHHhcCCCCeeeeEE-EEec--CCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcH
Confidence 345567888888776 4443 34689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||||+..+++||+|||+++.+.............. ........ ..... ..+.
T Consensus 130 ~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~-----~~~~~---~~~~ 182 (381)
T cd05626 130 DNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSH-------------------IRQDSMEP-----SDLWD---DVSN 182 (381)
T ss_pred HHEEECCCCCEEEeeCcCCccccccccccccccccc-------------------ccccccCc-----ccccc---cccc
Confidence 999999999999999999876422211000000000 00000000 00000 0000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
...+... +..... ... ..........+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 183 ~~~~~~~---------~~~~~~------~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~ 246 (381)
T cd05626 183 CRCGDRL---------KTLEQR------ATK-QHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQP 246 (381)
T ss_pred ccccccc---------chhhcc------ccc-cccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCC
Confidence 0000000 000000 000 000001134689999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--ccCCCchhhccChhhHHHHHHhc--CCCCCCCCCHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L--~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||............+. .....+.....++.+.+||.+|| ..+|..||++.+++.||||...
T Consensus 247 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 247 PFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred CCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 8865544433333332 12222333456788999999955 4555669999999999999864
No 136
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=1.2e-30 Score=293.74 Aligned_cols=251 Identities=15% Similarity=0.148 Sum_probs=165.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. .+.+ ...+|+|||||+||+|.+++.+. +.+++..++.++.||+.||+|||++|||||||||
T Consensus 54 il~~~~h~~iv~~~~-~~~~--~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp 129 (382)
T cd05625 54 ILAEADNEWVVRLYY-SFQD--KDNLYFVMDYIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKP 129 (382)
T ss_pred HHHhCCCCcCCeEEE-EEEe--CCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 345567888888777 4443 34689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.+......... ...+. .......+......
T Consensus 130 ~NILl~~~g~~kL~DFGla~~~~~~~~~~~~-------------------------~~~~~--~~~~~~~~~~~~~~--- 179 (382)
T cd05625 130 DNILIDRDGHIKLTDFGLCTGFRWTHDSKYY-------------------------QSGDH--VRQDSMDFSNEWGD--- 179 (382)
T ss_pred HHEEECCCCCEEEeECCCCcccccccccccc-------------------------ccccc--cccccccccccccc---
Confidence 9999999999999999998654211000000 00000 00000000000000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....+..+.....+.... ...........+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 180 ------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~ 246 (382)
T cd05625 180 ------------PANCRCGDRLKPLERRAA-RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 246 (382)
T ss_pred ------------cccccccccccchhhhhc-cccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCC
Confidence 000000000000000000 0000011234689999999999999899999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc--cCCCchhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~~~~~ 329 (879)
||.........+..+.. ....|.....++.+.++|.+|+ .+|.+|++ +.++++||||....
T Consensus 247 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~ 312 (382)
T cd05625 247 PFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTID 312 (382)
T ss_pred CCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcC
Confidence 88665544444443322 2222333456788999999976 59999987 99999999998753
No 137
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-30 Score=285.23 Aligned_cols=194 Identities=19% Similarity=0.173 Sum_probs=158.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|+|++...+ ++.+ +.+.|+|||++.|+-|.+.+...+ ....++..|++||+.||+|||++|||||||||
T Consensus 369 ~~~~~~h~niv~~~~-v~~~--~~~~~~v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp 443 (612)
T KOG0603|consen 369 SLLVRDHPNIVKSHD-VYED--GKEIYLVMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQGVVHRDLKP 443 (612)
T ss_pred hhhhcCCCcceeecc-eecC--CceeeeeehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcCeeecCCCh
Confidence 344578888877666 6654 456899999999999988885542 23378889999999999999999999999999
Q ss_pred cceee-ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 111 SCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 111 ~NIll-~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
+|||+ +..++++|+|||.++..... .
T Consensus 444 ~NIL~~~~~g~lrltyFG~a~~~~~~-~---------------------------------------------------- 470 (612)
T KOG0603|consen 444 GNILLDGSAGHLRLTYFGFWSELERS-C---------------------------------------------------- 470 (612)
T ss_pred hheeecCCCCcEEEEEechhhhCchh-h----------------------------------------------------
Confidence 99999 58899999999999774222 0
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
...+=|..|.|||++....|++++|||||||+||+||+
T Consensus 471 ----------------------------------------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~ 510 (612)
T KOG0603|consen 471 ----------------------------------------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGR 510 (612)
T ss_pred ----------------------------------------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCC
Confidence 00133778999999998889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||.........+..+..+ +.....+..+++|+.+||+.||.+||++.+++.||||
T Consensus 511 tp~~~~P~~~ei~~~i~~~---~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 511 TLFAAHPAGIEIHTRIQMP---KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CccccCCchHHHHHhhcCC---ccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 776665554455444433 2235678899999999999999999999999999999
No 138
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=1.3e-30 Score=297.32 Aligned_cols=209 Identities=16% Similarity=0.197 Sum_probs=151.2
Q ss_pred eeecccccccCCCCCCc---cccc--ccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 30 VELTHGDHLRNQGGLSG---VCEN--EAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
..+...+|++++..++. .|.. +....+|++|||+++ +|.+++. .....+++..++.|+.||+.||+|||++
T Consensus 111 ~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~ 189 (440)
T PTZ00036 111 LIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK 189 (440)
T ss_pred HHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34555678888765441 1211 222346789999975 6777663 3346789999999999999999999999
Q ss_pred CcccccCCCcceeeccCC-CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 102 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 102 givHrDlKP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
|||||||||+||||+..+ .+||+|||+++......
T Consensus 190 ~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~-------------------------------------------- 225 (440)
T PTZ00036 190 FICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ-------------------------------------------- 225 (440)
T ss_pred CEecCCcCHHHEEEcCCCCceeeeccccchhccCCC--------------------------------------------
Confidence 999999999999998665 69999999997532110
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlG 259 (879)
.....+||++|+|||++.+. .|+.++||||||
T Consensus 226 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 258 (440)
T PTZ00036 226 -----------------------------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLG 258 (440)
T ss_pred -----------------------------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHH
Confidence 01224789999999998765 599999999999
Q ss_pred HHHHHhhc---CCCCChhhHhHHhhhccc------------------CCCc---------hhhccChhhHHHHHHhcCCC
Q 002801 260 VLLFELFC---PFSTGEEKTRTMSSLRHR------------------VLPP---------QLLLKFPKEASFCLWLLHPE 309 (879)
Q Consensus 260 vil~ell~---pf~~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~li~~~L~~d 309 (879)
|+||||++ ||............+... .++. .+...++++.+||.+||..|
T Consensus 259 vil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~d 338 (440)
T PTZ00036 259 CIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYE 338 (440)
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCC
Confidence 99999999 665443322221111100 0000 01124567889999999999
Q ss_pred CCCCCCHHHHhhcccccCCcC
Q 002801 310 PSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 310 P~~Rpt~~evl~hp~~~~~~~ 330 (879)
|.+|||+.|+|+||||..+..
T Consensus 339 P~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 339 PLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred hhHCcCHHHHhCChhHHhhhc
Confidence 999999999999999986543
No 139
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97 E-value=1.4e-30 Score=291.37 Aligned_cols=242 Identities=12% Similarity=0.150 Sum_probs=163.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|||||||.|++|.+++... ..+++.+++.|+.||+.||+|||++||+||||||
T Consensus 54 il~~l~h~~iv~~~~-~~~~--~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp 129 (364)
T cd05599 54 ILAEADNPWVVKLYY-SFQD--ENYLYLIMEYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKP 129 (364)
T ss_pred HHHhCCCCCCcceEE-EEEc--CCeEEEEECCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCH
Confidence 344557888888776 4433 44689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++........... ....... ..++ ... ...+.
T Consensus 130 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~--~~~~~~~-----------------~~~~----------~~~-~~~~~ 179 (364)
T cd05599 130 DNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY--RILSHAL-----------------PSNF----------LDF-ISKPM 179 (364)
T ss_pred HHeEECCCCCEEEeecccceecccccccccc--ccccccc-----------------cccc----------ccc-ccccc
Confidence 9999999999999999999764322111000 0000000 0000 000 00000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....... ...... .......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 180 ~~~~~~~-------------------~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 180 SSKRKAE-------------------TWKRNR---RALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred ccccccc-------------------chhhcc---cccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 0000000 000000 000123589999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc--cCCCchhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~~~~~ 329 (879)
||............+.. ....+.....++.+.+||.+||. +|.+|++ +.++++||||....
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~ 303 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVD 303 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence 77655443333222221 11122223456788999999996 9999987 99999999998753
No 140
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=1.1e-30 Score=288.03 Aligned_cols=199 Identities=18% Similarity=0.212 Sum_probs=155.9
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..+. ++. .....|+||||+.|++|..++.+. +.+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 54 ~~p~i~~~~~-~~~--~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili 129 (330)
T cd05586 54 ESPFIVGLKF-SFQ--TDSDLYLVTDYMSGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL 129 (330)
T ss_pred CCCcCcceEE-EEe--cCCeEEEEEcCCCCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE
Confidence 6888877666 333 234689999999999999999654 578999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++.......
T Consensus 130 ~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------------------- 151 (330)
T cd05586 130 DATGHIALCDFGLSKANLTDNK---------------------------------------------------------- 151 (330)
T ss_pred CCCCCEEEecCCcCcCCCCCCC----------------------------------------------------------
Confidence 9999999999999864211000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc---CCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
.....+||..|+|||++.+.. ++.++|||||||+||||++ ||..
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 152 --------------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred --------------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 012247899999999997654 8999999999999999999 8865
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC----CHHHHhhcccccCCc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEPR 329 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----t~~evl~hp~~~~~~ 329 (879)
...... ...+............++.+.+|+.+||.+||.+|| ++.++++||||....
T Consensus 200 ~~~~~~-~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 200 EDTQQM-YRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred CCHHHH-HHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 543332 223322222111123567889999999999999998 789999999998643
No 141
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=1.5e-30 Score=286.19 Aligned_cols=201 Identities=19% Similarity=0.160 Sum_probs=159.4
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+. .....|++|||+.|++|..++.+. +.+++.+++.++.||+.||+|||++||+||||||+
T Consensus 50 l~~~~hp~iv~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~ 125 (325)
T cd05604 50 LKNVKHPFLVGLHY-SFQ--TTEKLYFVLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPE 125 (325)
T ss_pred HHhCCCCCCccEEE-EEe--cCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHH
Confidence 44567888888766 343 244689999999999999998654 57899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++.......
T Consensus 126 NIll~~~~~~kL~DfG~~~~~~~~~~------------------------------------------------------ 151 (325)
T cd05604 126 NILLDSQGHVVLTDFGLCKEGIAQSD------------------------------------------------------ 151 (325)
T ss_pred HeEECCCCCEEEeecCCcccCCCCCC------------------------------------------------------
Confidence 99999999999999999864211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ |
T Consensus 152 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~p 195 (325)
T cd05604 152 ------------------------------------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred ------------------------------------CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCC
Confidence 0123478999999999999999999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH----HHHhhcccccCC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~evl~hp~~~~~ 328 (879)
|............+... . ......+..+.+++.+||..+|.+||++ .+++.||||...
T Consensus 196 f~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 196 FYCRDVAEMYDNILHKP-L-VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCCHHHHHHHHHcCC-c-cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 76554433333333222 1 1122456778899999999999999986 589999999864
No 142
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=8e-29 Score=253.48 Aligned_cols=270 Identities=16% Similarity=0.236 Sum_probs=224.2
Q ss_pred ceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEe
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 535 ~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
++++++.|.+.-+|.+..-.- ..+. .++.+|..+|..|.||||.+++++|+.|..+.+||+.++..... ...
T Consensus 238 yLAsaSkD~Taiiw~v~~d~~-~kl~-~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~------y~~ 309 (519)
T KOG0293|consen 238 YLASASKDSTAIIWIVVYDVH-FKLK-KTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHL------YPS 309 (519)
T ss_pred eEeeccCCceEEEEEEecCcc-eeee-eeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhh------ccc
Confidence 348889999999997654222 1111 34569999999999999999999999999999999998543222 112
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccC-CCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH-ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h-~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
++.-.++|++|.|. +..+++|+.|+++..||++ |......++- ...|++++.++ ||+.+++...|..|++++.++.
T Consensus 310 ~~~~S~~sc~W~pD-g~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~-Dgk~vl~v~~d~~i~l~~~e~~ 386 (519)
T KOG0293|consen 310 GLGFSVSSCAWCPD-GFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITY-DGKYVLLVTVDKKIRLYNREAR 386 (519)
T ss_pred CcCCCcceeEEccC-CceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcC-CCcEEEEEecccceeeechhhh
Confidence 24567999999995 8899999999999999996 4434444332 25699999999 9999999999999999999988
Q ss_pred ceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEE--EEc--CCCEEEEEEcCCcE
Q 002801 694 VSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYV--KFV--DATTLVSASTDNTL 769 (879)
Q Consensus 694 ~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v--~fs--~~~~l~s~s~D~~i 769 (879)
.....+..+.+|++++.+.+ ++++++.-.+..|++||+...+ .+..+.||+..-.-+ +|- +..+++|||.|++|
T Consensus 387 ~dr~lise~~~its~~iS~d-~k~~LvnL~~qei~LWDl~e~~-lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kv 464 (519)
T KOG0293|consen 387 VDRGLISEEQPITSFSISKD-GKLALVNLQDQEIHLWDLEENK-LVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKV 464 (519)
T ss_pred hhhccccccCceeEEEEcCC-CcEEEEEcccCeeEEeecchhh-HHHHhhcccccceEEEeccCCCCcceEEecCCCceE
Confidence 88878888999999999999 8999999999999999999766 477888997653333 453 77899999999999
Q ss_pred EEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecC
Q 002801 770 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKA 823 (879)
Q Consensus 770 ~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~ 823 (879)
+||+..++ +++..+.||...|++|+|+|.+. ++|++|.||+|+||-..
T Consensus 465 yIWhr~sg------kll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 465 YIWHRISG------KLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred EEEEccCC------ceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 99999997 89999999999999999999875 89999999999999765
No 143
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=6.5e-31 Score=286.42 Aligned_cols=206 Identities=18% Similarity=0.200 Sum_probs=177.8
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcC--cc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG--IV 104 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~g--iv 104 (879)
.+...|...+|+|++.+|.. ..+..+...-+|.|++..|+|++|+++. +.++...++.+++||++||.|||++. ||
T Consensus 90 ~Ev~lLKsL~H~NIirfy~S-W~d~~n~~in~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPII 167 (632)
T KOG0584|consen 90 SEVHLLKSLKHPNIIRFYDS-WVDTDNKTINFITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPII 167 (632)
T ss_pred HHHHHHccCCCCceeeeeeh-eecCCCceeeeeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCcc
Confidence 33445666899999999994 4455556788999999999999999776 57899999999999999999999995 99
Q ss_pred cccCCCcceeec-cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 105 VHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 105 HrDlKP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
|||||.+||+|+ ..|.|||.|+|+|......
T Consensus 168 HRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s------------------------------------------------ 199 (632)
T KOG0584|consen 168 HRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS------------------------------------------------ 199 (632)
T ss_pred ccccccceEEEcCCcCceeecchhHHHHhhcc------------------------------------------------
Confidence 999999999997 4599999999999763111
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
.....+|||.|||||+.. ..|+..+||||||+++.
T Consensus 200 --------------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmL 234 (632)
T KOG0584|consen 200 --------------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCML 234 (632)
T ss_pred --------------------------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHH
Confidence 113369999999999986 66999999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhcccCCCchhhc-cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||+| ||.........+..+..+..|..+.. ..|+++.||.+||.. .++|||+.|+|.||||+..
T Consensus 235 EMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 235 EMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 9999 99999999999999999988876654 357899999999999 9999999999999999864
No 144
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.96 E-value=7.1e-29 Score=249.68 Aligned_cols=239 Identities=19% Similarity=0.306 Sum_probs=217.2
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
..|.+.|.|+++.|. ..++++|+.|++++|||+.+++...++.+|...|..+++|+ -..++.+++.|+.|+.||++..
T Consensus 148 ~gHlgWVr~vavdP~-n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~-rHpYlFs~gedk~VKCwDLe~n 225 (460)
T KOG0285|consen 148 SGHLGWVRSVAVDPG-NEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSK-RHPYLFSAGEDKQVKCWDLEYN 225 (460)
T ss_pred hhccceEEEEeeCCC-ceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecc-cCceEEEecCCCeeEEEechhh
Confidence 468899999999997 89999999999999999999999999999999999999998 7789999999999999999999
Q ss_pred ceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEE
Q 002801 694 VSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKL 771 (879)
Q Consensus 694 ~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~l 771 (879)
+.|+.+..+ +.|.|++.+|. -..|++|+.|.++++||+|+.. .+.++.||+.+|..|.+. .+..++|||.|++|++
T Consensus 226 kvIR~YhGHlS~V~~L~lhPT-ldvl~t~grDst~RvWDiRtr~-~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrl 303 (460)
T KOG0285|consen 226 KVIRHYHGHLSGVYCLDLHPT-LDVLVTGGRDSTIRVWDIRTRA-SVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRL 303 (460)
T ss_pred hhHHHhccccceeEEEecccc-ceeEEecCCcceEEEeeecccc-eEEEecCCCCcceeEEeecCCCceEEecCCceEEE
Confidence 999887754 67999999998 7899999999999999999987 499999999999999998 6667999999999999
Q ss_pred EecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCE
Q 002801 772 WDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFI 851 (879)
Q Consensus 772 wd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 851 (879)
||++.+ +...++..|...|.+++.+|....+|++|.|+ |+-|++..+.-+.. +.+|..-|
T Consensus 304 WDl~ag------kt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~n-------------lsgh~~ii 363 (460)
T KOG0285|consen 304 WDLRAG------KTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQN-------------LSGHNAII 363 (460)
T ss_pred eeeccC------ceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhc-------------ccccccee
Confidence 999998 66788889999999999999999999999886 99999887655443 25778889
Q ss_pred EEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 852 SSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 852 ~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
++++-+.|+ ++++|+..|.|.+||.
T Consensus 364 ntl~~nsD~--v~~~G~dng~~~fwdw 388 (460)
T KOG0285|consen 364 NTLSVNSDG--VLVSGGDNGSIMFWDW 388 (460)
T ss_pred eeeeeccCc--eEEEcCCceEEEEEec
Confidence 999998776 5999999999999983
No 145
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96 E-value=4.1e-30 Score=284.52 Aligned_cols=196 Identities=16% Similarity=0.180 Sum_probs=151.1
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------------------------------
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------------------------------------- 76 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------------------------------------- 76 (879)
+|+|++..++ +|..+ ....|++|||++||+|.++|....
T Consensus 69 ~h~niv~~~~-~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (338)
T cd05102 69 NHLNVVNLLG-ACTKP-NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLF 146 (338)
T ss_pred cCcceeeEEe-EecCC-CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccc
Confidence 7888887776 55432 345799999999999999985421
Q ss_pred ----------------------CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCC
Q 002801 77 ----------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 134 (879)
Q Consensus 77 ----------------------~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~ 134 (879)
.++++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~ 226 (338)
T cd05102 147 SRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 226 (338)
T ss_pred cccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeeccccccccc
Confidence 2477889999999999999999999999999999999999999999999999875321
Q ss_pred CCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccc
Q 002801 135 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 214 (879)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 214 (879)
....
T Consensus 227 ~~~~---------------------------------------------------------------------------- 230 (338)
T cd05102 227 DPDY---------------------------------------------------------------------------- 230 (338)
T ss_pred Ccch----------------------------------------------------------------------------
Confidence 1000
Q ss_pred hhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCch
Q 002801 215 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290 (879)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~ 290 (879)
.......++..|+|||++.+..++.++|||||||+||||++ ||............+.....+..
T Consensus 231 ------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 298 (338)
T cd05102 231 ------------VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRA 298 (338)
T ss_pred ------------hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCC
Confidence 00011245678999999999889999999999999999985 77544333333333333333333
Q ss_pred hhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 291 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 291 ~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
....++.+.+++.+||..||.+|||+.++++
T Consensus 299 ~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 299 PENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 4456678999999999999999999999976
No 146
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-31 Score=287.57 Aligned_cols=226 Identities=19% Similarity=0.193 Sum_probs=179.2
Q ss_pred ccccccCCCCCcccccc--cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCC--ChhHHH
Q 002801 10 RFGVRGDDSNDFELRKH--SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV--DVYECL 85 (879)
Q Consensus 10 ~~~~~~~~~~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l--~~~~~~ 85 (879)
|++++.-+..++++-.- .+...-++..|+|+|..++. | .+ +...-|.||.++||+|..+|+..-+++ ++..+-
T Consensus 602 rIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs-~-se-nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~ 678 (1226)
T KOG4279|consen 602 RIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGS-V-SE-NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMN 678 (1226)
T ss_pred EEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhc-c-CC-CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHH
Confidence 45555555555555221 23334456788888887772 2 22 224567899999999999998877788 888999
Q ss_pred HHHHHHHHHHHhhhhcCcccccCCCcceeec-cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhh
Q 002801 86 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 164 (879)
Q Consensus 86 ~i~~qi~~~l~~lHs~givHrDlKP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (879)
.+.+||++||.|||++.|||||||-+|+|++ -+|.+||.|||.++.+..- |
T Consensus 679 fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi------n---------------------- 730 (1226)
T KOG4279|consen 679 FYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI------N---------------------- 730 (1226)
T ss_pred HHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC------C----------------------
Confidence 9999999999999999999999999999996 7899999999999774211 0
Q ss_pred hccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccc
Q 002801 165 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 244 (879)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 244 (879)
|+ .-.+.||..|||||++
T Consensus 731 -------------------------------------------------------------P~-TETFTGTLQYMAPEvI 748 (1226)
T KOG4279|consen 731 -------------------------------------------------------------PC-TETFTGTLQYMAPEVI 748 (1226)
T ss_pred -------------------------------------------------------------cc-ccccccchhhhChHhh
Confidence 00 1236899999999999
Q ss_pred cCCC--CCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhc-ccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 245 AGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 245 ~~~~--~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
..++ |+.++|||||||++.||.| ||.......++|..+. ...-||.+...+.+++.||.+|+.+||.+||++.+
T Consensus 749 DqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~ 828 (1226)
T KOG4279|consen 749 DQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKD 828 (1226)
T ss_pred ccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHH
Confidence 8765 9999999999999999999 8876666666666543 33456777778889999999999999999999999
Q ss_pred HhhcccccCC
Q 002801 319 LLQSEFLNEP 328 (879)
Q Consensus 319 vl~hp~~~~~ 328 (879)
+|+.||+...
T Consensus 829 LL~DpFlq~~ 838 (1226)
T KOG4279|consen 829 LLQDPFLQHN 838 (1226)
T ss_pred hccCcccccC
Confidence 9999999753
No 147
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.96 E-value=2.2e-30 Score=284.61 Aligned_cols=184 Identities=18% Similarity=0.238 Sum_probs=149.5
Q ss_pred ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCC
Q 002801 53 AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (879)
Q Consensus 53 ~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~ 132 (879)
....|+||||+.||+|.+++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 73 ~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 73 MDRLYFVMEYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 34689999999999999998554 46899999999999999999999999999999999999999999999999998642
Q ss_pred CCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccc
Q 002801 133 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 212 (879)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (879)
.....
T Consensus 152 ~~~~~--------------------------------------------------------------------------- 156 (323)
T cd05616 152 MWDGV--------------------------------------------------------------------------- 156 (323)
T ss_pred CCCCC---------------------------------------------------------------------------
Confidence 11100
Q ss_pred cchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCc
Q 002801 213 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289 (879)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~ 289 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ ||..................
T Consensus 157 ---------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~-- 219 (323)
T cd05616 157 ---------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-- 219 (323)
T ss_pred ---------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--
Confidence 0122478999999999999999999999999999999999 77655443333333332222
Q ss_pred hhhccChhhHHHHHHhcCCCCCCCCCH-----HHHhhcccccCCc
Q 002801 290 QLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEPR 329 (879)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~evl~hp~~~~~~ 329 (879)
.+...++.+.+++.+||+.||.+|+++ .++++||||....
T Consensus 220 ~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 220 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 223466889999999999999999984 8999999998754
No 148
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-31 Score=310.86 Aligned_cols=232 Identities=19% Similarity=0.210 Sum_probs=189.2
Q ss_pred cccccccccCCCCCc---ccccc-cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChh
Q 002801 7 RGERFGVRGDDSNDF---ELRKH-SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~~~~~~---~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~ 82 (879)
.|+-.+++...-+++ .|... +++-++...+|+|+|..|+ +..... ..||.||||+||+|.+++... +..++.
T Consensus 1259 tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyG-VEvHRe--kv~IFMEyC~~GsLa~ll~~g-ri~dE~ 1334 (1509)
T KOG4645|consen 1259 TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYG-VEVHRE--KVYIFMEYCEGGSLASLLEHG-RIEDEM 1334 (1509)
T ss_pred ccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCc-eeecHH--HHHHHHHHhccCcHHHHHHhc-chhhhh
Confidence 456666654444433 33322 4555677889999999888 665443 468899999999999999554 567888
Q ss_pred HHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhh
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
..+.+..|++.||+|||++|||||||||+||+|+.+|.+|+.|||.|.......
T Consensus 1335 vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~-------------------------- 1388 (1509)
T KOG4645|consen 1335 VTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA-------------------------- 1388 (1509)
T ss_pred HHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCch--------------------------
Confidence 999999999999999999999999999999999999999999999997642220
Q ss_pred hhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccc
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
+++|......+||+.|||||
T Consensus 1389 ------------------------------------------------------------~~~~~el~~~~GT~~YMAPE 1408 (1509)
T KOG4645|consen 1389 ------------------------------------------------------------QTMPGELQSMMGTPMYMAPE 1408 (1509)
T ss_pred ------------------------------------------------------------hcCCHHHHhhcCCchhcCch
Confidence 01111223469999999999
Q ss_pred cccCCC---CCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH
Q 002801 243 ELAGAP---VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 243 ~~~~~~---~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
++.+.. -.-++|||||||+..||+| ||..-+...+.|-.+..+..|+.+...++...+||..||..||.+|.++
T Consensus 1409 vit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~ 1488 (1509)
T KOG4645|consen 1409 VITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTA 1488 (1509)
T ss_pred hhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHH
Confidence 998754 5678999999999999999 9988888888888888888888888889999999999999999999999
Q ss_pred HHHhhcccccCC
Q 002801 317 GELLQSEFLNEP 328 (879)
Q Consensus 317 ~evl~hp~~~~~ 328 (879)
.|+++|.|-+.-
T Consensus 1489 ~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1489 SQLLEHAFGKSC 1500 (1509)
T ss_pred HHHHHhhccccc
Confidence 999999998753
No 149
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96 E-value=3.2e-30 Score=282.58 Aligned_cols=197 Identities=20% Similarity=0.191 Sum_probs=157.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ ++.+ ....|+||||+.|++|..++.+. +.+++.++..++.||+.||.|||++||+||||||+|||+
T Consensus 54 ~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill 129 (318)
T cd05570 54 KHPFLTQLHS-CFQT--KDRLFFVMEYVNGGDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL 129 (318)
T ss_pred CCCCccceee-EEEc--CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE
Confidence 6778877666 4433 34689999999999999998654 478999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++.......
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------------------- 151 (318)
T cd05570 130 DSEGHIKIADFGMCKEGILGGV---------------------------------------------------------- 151 (318)
T ss_pred CCCCcEEecccCCCeecCcCCC----------------------------------------------------------
Confidence 9999999999999854210000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 152 --------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~ 199 (318)
T cd05570 152 --------------------------------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD 199 (318)
T ss_pred --------------------------------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC
Confidence 0022478999999999999999999999999999999999 77654
Q ss_pred hhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH-----HHHhhcccccCC
Q 002801 273 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 328 (879)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~evl~hp~~~~~ 328 (879)
............... .....++.+.+||.+||+.||.+||++ .++++||||...
T Consensus 200 ~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 200 DEDELFQSILEDEVR--YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CHHHHHHHHHcCCCC--CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 433322222222222 223456788999999999999999999 999999999864
No 150
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.96 E-value=7.1e-29 Score=245.18 Aligned_cols=292 Identities=16% Similarity=0.282 Sum_probs=236.9
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCccc---------CcCcccccceEE--eccCCCeeEEEEeCCCCC
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII---------NENRDIHYPVVE--MASRSKLSSICWNSYIKS 631 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~---------~~~~~~~~~~~~--~~~~~~i~~l~~~~~~~~ 631 (879)
-+..|.+++.+.+|+|||.++|||+.|-.|||+|++..+ ....+.+.|++. ..|...|+++.|+|. ..
T Consensus 107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr-e~ 185 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR-ET 185 (430)
T ss_pred EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch-hh
Confidence 345799999999999999999999999999999997421 112222334432 468899999999996 89
Q ss_pred eEEEeeCCCcEEEEEcCCCeEEEEec--cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe----cCCce
Q 002801 632 QIASSNFEGVVQVWDVSRSQVLTEMR--EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK----TKANV 705 (879)
Q Consensus 632 ~l~s~~~dg~V~vwd~~~~~~~~~~~--~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~----~~~~v 705 (879)
+|++|+.|++|++||..+....+-++ ....+|.++.|+| .|.+++.|.+..++++||+++.++...-. +.+.|
T Consensus 186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai 264 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAI 264 (430)
T ss_pred eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecC-CCceEEEecCCCceeEEeccceeEeeecCcccccccce
Confidence 99999999999999997654332222 2346899999999 99999999999999999999998876553 45679
Q ss_pred EEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEc-cCC-CCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCccccc
Q 002801 706 CCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI-GHN-KTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVI 782 (879)
Q Consensus 706 ~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~-~h~-~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~ 782 (879)
++|.+++. +++.++||.||.|++||--+.++ +.++. .|. ..|++..|. ++++++|.+.|..+++|.+.++
T Consensus 265 ~~V~Ys~t-~~lYvTaSkDG~IklwDGVS~rC-v~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~----- 337 (430)
T KOG0640|consen 265 TQVRYSST-GSLYVTASKDGAIKLWDGVSNRC-VRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG----- 337 (430)
T ss_pred eEEEecCC-ccEEEEeccCCcEEeeccccHHH-HHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC-----
Confidence 99999999 89999999999999999888775 55554 564 479999999 9999999999999999999997
Q ss_pred CCceEEEeCCCC-----cEEEEEEecCCCEEEEEeC-CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEE
Q 002801 783 DTPLHSFTGHTN-----VKNFVGLSVWDGYVATGSE-TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCW 856 (879)
Q Consensus 783 ~~~~~~~~~h~~-----~v~~v~~sp~~~~lasgs~-Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 856 (879)
+++..+.|-.. --+...|+....|++.-.+ .+++.-||-++...+.-+. -+|++.|+.+.-
T Consensus 338 -R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s------------lgHn~a~R~i~H 404 (430)
T KOG0640|consen 338 -RMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS------------LGHNGAVRWIVH 404 (430)
T ss_pred -ceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcc------------cCCCCCceEEEe
Confidence 78888876421 1233457777777776654 5779999988765544332 578999999999
Q ss_pred eCCCCcEEEEEeCCCcEEEEE
Q 002801 857 RGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 857 ~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
+|.++ .+.+|+.|-.+++|-
T Consensus 405 SP~~p-~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 405 SPVEP-AFMTCSDDFRARFWY 424 (430)
T ss_pred CCCCC-ceeeecccceeeeee
Confidence 99999 999999999999994
No 151
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.96 E-value=2.2e-30 Score=285.01 Aligned_cols=199 Identities=16% Similarity=0.203 Sum_probs=154.3
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
.|++++..+. .+. .....|+||||++|++|..++.+. +.+++.+++.|+.||+.||+|||++||+||||||+|||+
T Consensus 54 ~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili 129 (327)
T cd05617 54 SNPFLVGLHS-CFQ--TTSRLFLVIEYVNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL 129 (327)
T ss_pred CCCCEeeEEE-EEE--eCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence 5667766655 333 234689999999999999988554 468999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++.......
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------------------- 151 (327)
T cd05617 130 DADGHIKLTDYGMCKEGLGPGD---------------------------------------------------------- 151 (327)
T ss_pred eCCCCEEEeccccceeccCCCC----------------------------------------------------------
Confidence 9999999999999864211000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ ||...
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~ 199 (327)
T cd05617 152 --------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDII 199 (327)
T ss_pred --------------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCcc
Confidence 0122478999999999999999999999999999999999 77421
Q ss_pred h------hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC------HHHHhhcccccCCc
Q 002801 273 E------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEPR 329 (879)
Q Consensus 273 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~evl~hp~~~~~~ 329 (879)
. ........+... ..+.+...++.+.+++.+||..||.+|++ +.+++.||||+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 200 TDNPDMNTEDYLFQVILEK-PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred CCCcccccHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 1 111122222221 11222345678899999999999999998 57999999998764
No 152
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96 E-value=2e-30 Score=278.89 Aligned_cols=205 Identities=17% Similarity=0.173 Sum_probs=156.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+...+|++++.... ++.. ....|++|||++|++|..++. .....+++.++..++.||+.||+|||++||+|||
T Consensus 46 il~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d 122 (280)
T cd05608 46 ILAKVHSRFIVSLAY-AFQT--KTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRD 122 (280)
T ss_pred HHHhCCCCcEeeeeE-EEcC--CCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 344556777766554 4433 346899999999999998773 2335689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.+|++|||+++.......
T Consensus 123 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 152 (280)
T cd05608 123 LKPENVLLDNDGNVRISDLGLAVELKDGQS-------------------------------------------------- 152 (280)
T ss_pred CCHHHEEECCCCCEEEeeCccceecCCCCc--------------------------------------------------
Confidence 999999999999999999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 153 ----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 192 (280)
T cd05608 153 ----------------------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIA 192 (280)
T ss_pred ----------------------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHh
Confidence 0012468999999999999999999999999999999999
Q ss_pred ---CCCCChhhH---hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 ---PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 ---pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||....... .....+... ........++.+.+++.+||+.||++|| +++++++||||+...
T Consensus 193 g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~ 264 (280)
T cd05608 193 ARGPFRARGEKVENKELKQRILND-SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN 264 (280)
T ss_pred CCCCCCCCCcchhHHHHHHhhccc-CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence 775432211 111111111 1122234567889999999999999999 889999999998754
No 153
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.96 E-value=5.4e-29 Score=246.02 Aligned_cols=291 Identities=17% Similarity=0.275 Sum_probs=238.7
Q ss_pred CCCCcccccccCCCCCCCCCccccccccccCCCccccccCCCCceecccccCceEEEeecCcEEE---EEe-----c---
Q 002801 492 SGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK---ADL-----N--- 560 (879)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~w~~~~~~~~---~~l-----~--- 560 (879)
++|..-|++.||+||.++ ++|+.|-.||+.|+...-.. .+. +
T Consensus 110 ~HK~~cR~aafs~DG~lv---------------------------ATGsaD~SIKildvermlaks~~~em~~~~~qa~h 162 (430)
T KOG0640|consen 110 SHKSPCRAAAFSPDGSLV---------------------------ATGSADASIKILDVERMLAKSKPKEMISGDTQARH 162 (430)
T ss_pred ecccceeeeeeCCCCcEE---------------------------EccCCcceEEEeehhhhhhhcchhhhccCCcccCC
Confidence 456667888999999887 88899999999998732110 000 1
Q ss_pred --cccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeC
Q 002801 561 --QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (879)
Q Consensus 561 --~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~ 638 (879)
-.+++.|.+.|+++.|+|-..+|++|+.|++||+||+... ..+.....+....+|.||+|+|. +++|+.|..
T Consensus 163 PvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~-----saKrA~K~~qd~~~vrsiSfHPs-GefllvgTd 236 (430)
T KOG0640|consen 163 PVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKT-----SAKRAFKVFQDTEPVRSISFHPS-GEFLLVGTD 236 (430)
T ss_pred ceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccH-----HHHHHHHHhhccceeeeEeecCC-CceEEEecC
Confidence 1257899999999999999999999999999999999852 22222333456678999999996 999999999
Q ss_pred CCcEEEEEcCCCeEEEEe---ccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec---CCceEEEEeeC
Q 002801 639 EGVVQVWDVSRSQVLTEM---REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT---KANVCCVQFPL 712 (879)
Q Consensus 639 dg~V~vwd~~~~~~~~~~---~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~---~~~v~~v~~~p 712 (879)
..++++||++|.|+...- ..|++.|++|.+++ ++++.++||.||.|+|||--+++++.+|.. ++.||+..|..
T Consensus 237 Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~-t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftk 315 (430)
T KOG0640|consen 237 HPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSS-TGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTK 315 (430)
T ss_pred CCceeEEeccceeEeeecCcccccccceeEEEecC-CccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEcc
Confidence 999999999999987654 46899999999999 999999999999999999999999998873 56799999999
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCceeeEEEccC-----CCCEEEEEEc-CCCEEEEEEc-CCcEEEEecCCCcccccCCc
Q 002801 713 DSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH-----NKTVSYVKFV-DATTLVSAST-DNTLKLWDLSMCTSRVIDTP 785 (879)
Q Consensus 713 ~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h-----~~~V~~v~fs-~~~~l~s~s~-D~~i~lwd~~~~~~~~~~~~ 785 (879)
+ ++++++.+.|..|++|.+.+++. +..+.|- ..--+...|+ ..++++.-.. .+.+.-||.++.. +.
T Consensus 316 n-~kyiLsSG~DS~vkLWEi~t~R~-l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtad-----r~ 388 (430)
T KOG0640|consen 316 N-GKYILSSGKDSTVKLWEISTGRM-LKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTAD-----RV 388 (430)
T ss_pred C-CeEEeecCCcceeeeeeecCCce-EEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchh-----hh
Confidence 9 99999999999999999999984 7666653 1223556777 7777776543 4789999999873 23
Q ss_pred eEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecC
Q 002801 786 LHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 786 ~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~ 823 (879)
...-.||.+.+..+..||.+..+++||.|..+++|..+
T Consensus 389 ~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 389 ALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred hhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence 33345899999999999999999999999999999765
No 154
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3.2e-30 Score=287.10 Aligned_cols=202 Identities=17% Similarity=0.194 Sum_probs=152.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++||++. ++|.+++......+++.+++.|+.||+.||.|||++|||||||||
T Consensus 110 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp 185 (357)
T PHA03209 110 LLQNVNHPSVIRMKD-TLVS--GAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKT 185 (357)
T ss_pred HHHhCCCCCCcChhh-eEEe--CCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 455678888888777 4443 345799999994 689998866667799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++..+.+||+|||+++......
T Consensus 186 ~Nill~~~~~~kl~DfG~a~~~~~~~------------------------------------------------------ 211 (357)
T PHA03209 186 ENIFINDVDQVCIGDLGAAQFPVVAP------------------------------------------------------ 211 (357)
T ss_pred HHEEECCCCCEEEecCccccccccCc------------------------------------------------------
Confidence 99999999999999999986421000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......||..|+|||++.+..++.++|||||||+||||++
T Consensus 212 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~ 254 (357)
T PHA03209 212 -------------------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPS 254 (357)
T ss_pred -------------------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCC
Confidence 0012468999999999999899999999999999999997
Q ss_pred CCCCChhh----------HhHHhhhcc-cCCCch-------------------------------hhccChhhHHHHHHh
Q 002801 268 PFSTGEEK----------TRTMSSLRH-RVLPPQ-------------------------------LLLKFPKEASFCLWL 305 (879)
Q Consensus 268 pf~~~~~~----------~~~~~~~~~-~~~~~~-------------------------------~~~~~~~~~~li~~~ 305 (879)
|++..... ......+.. ...++. ....+..+.+||.+|
T Consensus 255 ~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m 334 (357)
T PHA03209 255 TIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKM 334 (357)
T ss_pred ccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHH
Confidence 33221100 000000000 000000 012345567899999
Q ss_pred cCCCCCCCCCHHHHhhcccccC
Q 002801 306 LHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 306 L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|..||.+|||+.|+|+||||+.
T Consensus 335 L~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 335 LTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HcCCcccCcCHHHHhcCchhcc
Confidence 9999999999999999999975
No 155
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=1.9e-29 Score=254.59 Aligned_cols=269 Identities=20% Similarity=0.309 Sum_probs=232.9
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
..+++|+.||.+++||+++..+.+.++ .|.+.|..|+++. ..++|+|.|++|+.|.++.. |+..
T Consensus 80 s~~aSGs~DG~VkiWnlsqR~~~~~f~-----AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~---------p~~t 143 (433)
T KOG0268|consen 80 STVASGSCDGEVKIWNLSQRECIRTFK-----AHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGP---------PLHT 143 (433)
T ss_pred hhhhccccCceEEEEehhhhhhhheee-----cccCceeeEEecc--cceEEecCCcceeeeeccCC---------ccee
Confidence 456899999999999999988877765 7899999999997 67899999999999998751 4555
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
+...+.+..|.-+.. .+.++||+ -.|.|||.+...++..+..-...|.++.|+|.....|++|..|++|.|||++++
T Consensus 144 ilg~s~~~gIdh~~~-~~~FaTcG--e~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~ 220 (433)
T KOG0268|consen 144 ILGKSVYLGIDHHRK-NSVFATCG--EQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQA 220 (433)
T ss_pred eeccccccccccccc-cccccccC--ceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccC
Confidence 666777777776653 67888887 468999999889999998888899999999988889999999999999999999
Q ss_pred ceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEE
Q 002801 694 VSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLW 772 (879)
Q Consensus 694 ~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lw 772 (879)
++++.+-.+..-+.|+|+|. +-.+++|+.|..++.||+|....|+.++.+|.++|.+|.|+ .|+.++|||.|.+|+||
T Consensus 221 ~Pl~KVi~~mRTN~IswnPe-afnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf 299 (433)
T KOG0268|consen 221 SPLKKVILTMRTNTICWNPE-AFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIF 299 (433)
T ss_pred CccceeeeeccccceecCcc-ccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEe
Confidence 99999888888899999995 88899999999999999999999999999999999999999 99999999999999999
Q ss_pred ecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCC
Q 002801 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMP 827 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~ 827 (879)
.++.+.++ .+.- .--...|.+|.||-|.+||+|||.|+.|++|.-...+.
T Consensus 300 ~~~~~~SR----diYh-tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asek 349 (433)
T KOG0268|consen 300 PVNHGHSR----DIYH-TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEK 349 (433)
T ss_pred ecCCCcch----hhhh-HhhhheeeEEEEeccccEEEecCCCcceeeeecchhhh
Confidence 99988653 1110 00123588999999999999999999999998765443
No 156
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96 E-value=3.9e-30 Score=282.46 Aligned_cols=201 Identities=18% Similarity=0.184 Sum_probs=158.1
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+.+ ....|+||||++|++|..++.+. ..+++.++..++.||+.||+|||++||+||||||+
T Consensus 50 l~~~~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~ 125 (321)
T cd05603 50 LKNLKHPFLVGLHY-SFQT--AEKLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPE 125 (321)
T ss_pred HHhCCCCCccceee-EEEc--CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHH
Confidence 34567888888665 4433 34689999999999999988554 56899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||||+.++.+||+|||+++.......
T Consensus 126 NIll~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------------ 151 (321)
T cd05603 126 NILLDSQGHVVLTDFGLCKEGVEPEE------------------------------------------------------ 151 (321)
T ss_pred HeEECCCCCEEEccCCCCccCCCCCC------------------------------------------------------
Confidence 99999999999999999864211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ |
T Consensus 152 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p 195 (321)
T cd05603 152 ------------------------------------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPP 195 (321)
T ss_pred ------------------------------------ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCC
Confidence 0122478999999999998889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH----HHHhhcccccCC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~evl~hp~~~~~ 328 (879)
|....... ....+.... .+.....+..+.+++.+||+.||.+||++ .++++|+||...
T Consensus 196 f~~~~~~~-~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 196 FYSRDVSQ-MYDNILHKP-LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCCCCHHH-HHHHHhcCC-CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 76554332 223332222 12223456778899999999999999875 599999999764
No 157
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=3.7e-30 Score=283.81 Aligned_cols=202 Identities=18% Similarity=0.172 Sum_probs=156.9
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc-CcccccC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNV 108 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~-givHrDl 108 (879)
..+...+|++++..++ ++.+ ....|++|||++|++|.++++.. ..+++..+..++.||+.||.|||++ +|+||||
T Consensus 55 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dl 130 (331)
T cd06649 55 QVLHECNSPYIVGFYG-AFYS--DGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDV 130 (331)
T ss_pred HHHHHCCCCCCCeEEE-EEEE--CCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCC
Confidence 3455678888888777 4443 34689999999999999999654 4689999999999999999999986 6999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+|||++.++.+||+|||+++.....
T Consensus 131 kp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------------- 157 (331)
T cd06649 131 KPSNILVNSRGEIKLCDFGVSGQLIDS----------------------------------------------------- 157 (331)
T ss_pred ChhhEEEcCCCcEEEccCccccccccc-----------------------------------------------------
Confidence 999999999999999999998653110
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 158 ---------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg 198 (331)
T cd06649 158 ---------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG 198 (331)
T ss_pred ---------------------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhC
Confidence 0012368999999999998889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhc----------------------------------------------ccCCCch-hhccChhh
Q 002801 268 --PFSTGEEKTRTMSSLR----------------------------------------------HRVLPPQ-LLLKFPKE 298 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~----------------------------------------------~~~~~~~-~~~~~~~~ 298 (879)
||....... ....+. ....+.. ....++++
T Consensus 199 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 277 (331)
T cd06649 199 RYPIPPPDAKE-LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDF 277 (331)
T ss_pred CCCCCCCCHHH-HHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHH
Confidence 775432211 111110 0000110 11245678
Q ss_pred HHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 299 ~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
.+|+.+||..||++|||+.++++||||+..
T Consensus 278 ~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 278 QEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred HHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 999999999999999999999999999854
No 158
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.96 E-value=4e-30 Score=282.79 Aligned_cols=201 Identities=17% Similarity=0.170 Sum_probs=158.6
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+.+ ....|++|||+.|++|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+
T Consensus 50 l~~~~h~~Iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~ 125 (325)
T cd05602 50 LKNVKHPFLVGLHF-SFQT--ADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPE 125 (325)
T ss_pred HHhCCCCCCCceeE-EEEc--CCeEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHH
Confidence 34567888887766 3332 34689999999999999999654 56889999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++.......
T Consensus 126 Nili~~~~~~kl~DfG~a~~~~~~~~------------------------------------------------------ 151 (325)
T cd05602 126 NILLDSQGHIVLTDFGLCKENIEHNG------------------------------------------------------ 151 (325)
T ss_pred HeEECCCCCEEEccCCCCcccccCCC------------------------------------------------------
Confidence 99999999999999999864211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....+||+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 152 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p 195 (325)
T cd05602 152 ------------------------------------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred ------------------------------------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCC
Confidence 0122478999999999999899999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHH----HHhhcccccCC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG----ELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~----evl~hp~~~~~ 328 (879)
|........ +..+..... ......++.+.+++.+||+.||.+||++. ++++|+||...
T Consensus 196 f~~~~~~~~-~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 196 FYSRNTAEM-YDNILNKPL-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCHHHH-HHHHHhCCc-CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 765443332 222222211 12234667889999999999999999875 89999999764
No 159
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=3.1e-30 Score=289.80 Aligned_cols=250 Identities=13% Similarity=0.139 Sum_probs=161.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .+.+ ....|+||||++|++|.+++... +.+++..++.++.||+.||+|||++||+||||||
T Consensus 54 il~~l~hp~iv~~~~-~~~~--~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp 129 (377)
T cd05629 54 VLAESDSPWVVSLYY-SFQD--AQYLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKP 129 (377)
T ss_pred HHHhCCCCCcceEEE-EEEc--CCeeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 345568888888776 4433 44689999999999999999654 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+|++|||+++.+......... .............. .. ........+.... ..
T Consensus 130 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~------~~------ 191 (377)
T cd05629 130 DNILIDRGGHIKLSDFGLSTGFHKQHDSAYY-QKLLQGKSNKNRID----NR-NSVAVDSINLTMS------SK------ 191 (377)
T ss_pred HHEEECCCCCEEEeecccccccccccccccc-cccccccccccccc----cc-ccccccccccccc------ch------
Confidence 9999999999999999999754221100000 00000000000000 00 0000000000000 00
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.+..+.+ ..........+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 192 ---------------~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~ 246 (377)
T cd05629 192 ---------------DQIATWK----------KNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWP 246 (377)
T ss_pred ---------------hhhhhhh----------hcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCC
Confidence 0000000 000000123579999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--ccCCCchhhccChhhHHHHHHhcCCCCCCC---CCHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---pt~~evl~hp~~~~~ 328 (879)
||.............. .....|.....++.+.+||.+||. +|.+| +++.++++||||+..
T Consensus 247 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 247 PFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred CCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 7755443332222222 111122333456789999999998 66665 699999999999864
No 160
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96 E-value=1.2e-30 Score=286.26 Aligned_cols=205 Identities=17% Similarity=0.198 Sum_probs=161.9
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+...+|++++..++ ++.+ ....|+||||++|++|.+++.+. ..+++.+++.++.||+.||+|||++||+|||
T Consensus 48 E~~~l~~l~h~niv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d 123 (318)
T cd05582 48 ERDILAEVNHPFIVKLHY-AFQT--EGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRD 123 (318)
T ss_pred HHHHHHhCCCCCcccEEE-EEEc--CCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 333456678888888766 4443 34689999999999999999554 5689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.+||+|||+++.......
T Consensus 124 lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-------------------------------------------------- 153 (318)
T cd05582 124 LKPENILLDEEGHIKLTDFGLSKESIDHEK-------------------------------------------------- 153 (318)
T ss_pred CCHHHeEECCCCcEEEeeccCCcccCCCCC--------------------------------------------------
Confidence 999999999999999999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 154 ----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t 193 (318)
T cd05582 154 ----------------------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 193 (318)
T ss_pred ----------------------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeecc
Confidence 0122478999999999998889999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~ 328 (879)
||................. ..+...++.+.+||.+||+.||.+||+ +.+++.||||...
T Consensus 194 g~~p~~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 194 GSLPFQGKDRKETMTMILKAKL--GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred CCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 7765443333222222221 122345678899999999999999999 7789999999864
No 161
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96 E-value=1.7e-30 Score=291.79 Aligned_cols=246 Identities=12% Similarity=0.133 Sum_probs=163.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. .+.+ ...+|+|||||+|++|.+++.+. +.+++..++.++.||+.||+|||++||+||||||
T Consensus 54 il~~l~h~~iv~~~~-~~~~--~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp 129 (376)
T cd05598 54 ILAEADNEWVVKLYY-SFQD--KDNLYFVMDYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKP 129 (376)
T ss_pred HHHhCCCCCcceEEE-EEEc--CCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCH
Confidence 445567888887776 4433 44789999999999999999654 5689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+|..+.......-+... .. .. ......... .. .....
T Consensus 130 ~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~----~~---~~------------~~~~~~~~~----~~---~~~~~ 183 (376)
T cd05598 130 DNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKG----DH---HR------------QDSMEPSEE----WS---EIDRC 183 (376)
T ss_pred HHEEECCCCCEEEEeCCCCccccccccccccccc----cc---cc------------ccccccccc----cc---ccccc
Confidence 9999999999999999998654211000000000 00 00 000000000 00 00000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
. . ...................+||+.|||||++.+..++.++|||||||+||||++
T Consensus 184 ~--------------~-------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~ 242 (376)
T cd05598 184 R--------------L-------KPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 242 (376)
T ss_pred c--------------c-------cchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCC
Confidence 0 0 000000000000011134689999999999999999999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc--cCCCchhhccChhhHHHHHHhcCCCCCCCC---CHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~evl~hp~~~~~ 328 (879)
||............... ....+.....++.+.++|.+|+ .+|.+|+ ++.++++||||...
T Consensus 243 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 243 PFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred CCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 88655443333222221 1122333456788899999976 5999999 99999999999864
No 162
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-30 Score=277.07 Aligned_cols=204 Identities=17% Similarity=0.138 Sum_probs=161.9
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|||.+.+-+ |+-. +...+||||||-| |-.++|.-...++.+.++..|..+.+.||+||||.+.||||||..
T Consensus 80 L~~l~HPntieYkg--CyLr-e~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAG 155 (948)
T KOG0577|consen 80 LRQLRHPNTIEYKG--CYLR-EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAG 155 (948)
T ss_pred HHhccCCCcccccc--eeec-cchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhcccc
Confidence 45678888887555 5432 3357999999954 666766544557999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||||+..|.||++|||.|....+
T Consensus 156 NILLse~g~VKLaDFGSAsi~~P--------------------------------------------------------- 178 (948)
T KOG0577|consen 156 NILLSEPGLVKLADFGSASIMAP--------------------------------------------------------- 178 (948)
T ss_pred ceEecCCCeeeeccccchhhcCc---------------------------------------------------------
Confidence 99999999999999999966311
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC---CCCCccCcchhHHHHHHHhhc-
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvil~ell~- 267 (879)
...++|||+|||||++.. +.|+-++||||||+++.||.-
T Consensus 179 -------------------------------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAER 221 (948)
T KOG0577|consen 179 -------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 221 (948)
T ss_pred -------------------------------------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhc
Confidence 134699999999999863 559999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchH
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
|++..+.....+.+-......-.....+..+..|+..||++-|.+|||.+++|.|+|+...+.+..
T Consensus 222 kPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tv 289 (948)
T KOG0577|consen 222 KPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTV 289 (948)
T ss_pred CCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchH
Confidence 777766555554443332222222344567889999999999999999999999999987655443
No 163
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3.1e-28 Score=255.36 Aligned_cols=280 Identities=23% Similarity=0.304 Sum_probs=233.8
Q ss_pred CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEE
Q 002801 566 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~-~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~v 644 (879)
...+.|.+++|+|... -+|+.+. -++.||+..+....... ...+..+.+++|.. +|.++|+|+..|.|+|
T Consensus 24 ke~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k~~-------srFk~~v~s~~fR~-DG~LlaaGD~sG~V~v 94 (487)
T KOG0310|consen 24 KEHNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRKTF-------SRFKDVVYSVDFRS-DGRLLAAGDESGHVKV 94 (487)
T ss_pred cccCcceeEecCCCCCCceEEecc-cEEEEEecchhhhhhhH-------HhhccceeEEEeec-CCeEEEccCCcCcEEE
Confidence 3457899999999433 3444433 48999998764322211 12456789999987 5999999999999999
Q ss_pred EEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEEeC
Q 002801 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 645 wd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~ 723 (879)
||+.+...++.+.+|+.+|..+.|+|.+..+|++|++|+.+++||+.+...+..+. +..-|.|.+|+|..++.+++|+.
T Consensus 95 fD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsY 174 (487)
T KOG0310|consen 95 FDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSY 174 (487)
T ss_pred eccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCC
Confidence 99777667788899999999999999889999999999999999999988655555 45669999999998889999999
Q ss_pred CCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEe
Q 002801 724 DHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLS 802 (879)
Q Consensus 724 d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 802 (879)
||.|++||+|.....+..+ .|..+|..+.|. .|..++|++. +.+++||+-++. +.+..+..|...|+|+.+.
T Consensus 175 Dg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~-----qll~~~~~H~KtVTcL~l~ 247 (487)
T KOG0310|consen 175 DGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGG-----QLLTSMFNHNKTVTCLRLA 247 (487)
T ss_pred CceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCc-----eehhhhhcccceEEEEEee
Confidence 9999999999986456666 699999999998 7788988875 679999999773 5556666699999999999
Q ss_pred cCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEE
Q 002801 803 VWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 803 p~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw 876 (879)
.++..|++||-|+.|++|++..-+.+.+++| .++|.+++.+|++. .++.|.+||.+-+-
T Consensus 248 s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~--------------~~pvLsiavs~dd~-t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 248 SDSTRLLSGSLDRHVKVFDTTNYKVVHSWKY--------------PGPVLSIAVSPDDQ-TVVIGMSNGLVSIR 306 (487)
T ss_pred cCCceEeecccccceEEEEccceEEEEeeec--------------ccceeeEEecCCCc-eEEEecccceeeee
Confidence 9999999999999999999888777777765 35699999999999 99999999987654
No 164
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.96 E-value=4.7e-30 Score=286.38 Aligned_cols=238 Identities=14% Similarity=0.183 Sum_probs=161.2
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+. .....|+||||++|++|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+
T Consensus 55 l~~l~~~~iv~~~~-~~~--~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~ 130 (360)
T cd05627 55 LVEADGAWVVKMFY-SFQ--DKRNLYLIMEFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPD 130 (360)
T ss_pred HHhCCCCCEeeEEE-EEE--cCCEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHH
Confidence 44567888877766 333 344689999999999999999654 56899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++.........-. .. .....+ .++.+... ..
T Consensus 131 NIli~~~~~vkL~DfG~~~~~~~~~~~~~~-~~-~~~~~~-----------------~~~~~~~~-----------~~-- 178 (360)
T cd05627 131 NLLLDAKGHVKLSDFGLCTGLKKAHRTEFY-RN-LTHNPP-----------------SDFSFQNM-----------NS-- 178 (360)
T ss_pred HEEECCCCCEEEeeccCCcccccccccccc-cc-cccCCc-----------------cccccccc-----------cc--
Confidence 999999999999999999765322111000 00 000000 00000000 00
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
....+ . ............+||+.|+|||++.+..++.++|||||||+||||++ |
T Consensus 179 --------------------~~~~~--~-~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 179 --------------------KRKAE--T-WKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred --------------------ccccc--c-ccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 00000 0 00000001123589999999999999999999999999999999999 7
Q ss_pred CCCChhhHhHHhhhc--ccCCCchhhccChhhHHHHHHhcCCCCCCCC---CHHHHhhcccccCCc
Q 002801 269 FSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPR 329 (879)
Q Consensus 269 f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~evl~hp~~~~~~ 329 (879)
|.............. .....|.....++.+.+||.+|+. ||.+|+ ++.++++||||....
T Consensus 236 f~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~ 300 (360)
T cd05627 236 FCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVD 300 (360)
T ss_pred CCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCC
Confidence 765544333322222 111112223356788999999874 999998 489999999999754
No 165
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.96 E-value=6.1e-30 Score=272.39 Aligned_cols=204 Identities=17% Similarity=0.156 Sum_probs=161.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ ++.++ ..+|++|||++|++|.+++.+. ..+++..++.++.||+.||.|||+.||+||||||
T Consensus 57 ~l~~l~~~~i~~~~~-~~~~~--~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p 132 (263)
T cd06625 57 LLKNLQHERIVQYYG-CLRDD--ETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKG 132 (263)
T ss_pred HHHhCCCCCeeeeEE-EEccC--CeEEEEEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 455678888888777 44433 3789999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||+++.........
T Consensus 133 ~nilv~~~~~~~l~dfg~~~~~~~~~~~~--------------------------------------------------- 161 (263)
T cd06625 133 ANILRDSAGNVKLGDFGASKRLQTICSSG--------------------------------------------------- 161 (263)
T ss_pred HHEEEcCCCCEEEeecccceecccccccc---------------------------------------------------
Confidence 99999999999999999986532110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 162 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 205 (263)
T cd06625 162 ------------------------------------TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKP 205 (263)
T ss_pred ------------------------------------ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCC
Confidence 00012367889999999999889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..................++.....+..+.+++.+||..+|.+|||+.++++||||
T Consensus 206 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 206 PWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred CccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 7755444433333333333334444566788999999999999999999999999997
No 166
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.96 E-value=6.5e-30 Score=281.94 Aligned_cols=205 Identities=16% Similarity=0.200 Sum_probs=157.5
Q ss_pred cccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
....|++++..+. .+.+ ....|+||||+.||+|.+++.+....+++..++.++.||+.||+|||++||+||||||+|
T Consensus 56 ~~~~~~~i~~~~~-~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~N 132 (332)
T cd05623 56 VNGDNQWITTLHY-AFQD--ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDN 132 (332)
T ss_pred hhCCCCCEeeEEE-EEec--CCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence 3456777666555 3433 346899999999999999997655678999999999999999999999999999999999
Q ss_pred eeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccc
Q 002801 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (879)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (879)
||++.++.+||+|||+++........
T Consensus 133 ili~~~~~~kL~DfG~a~~~~~~~~~------------------------------------------------------ 158 (332)
T cd05623 133 ILMDMNGHIRLADFGSCLKLMEDGTV------------------------------------------------------ 158 (332)
T ss_pred EEECCCCCEEEeecchheecccCCcc------------------------------------------------------
Confidence 99999999999999998653111000
Q ss_pred cCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHHHhhc
Q 002801 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~ell~ 267 (879)
.....+||+.|+|||++.+ ..++.++|||||||+||||++
T Consensus 159 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~ 203 (332)
T cd05623 159 -----------------------------------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLY 203 (332)
T ss_pred -----------------------------------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhc
Confidence 0112478999999999862 458999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhccc---CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCCc
Q 002801 268 ---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~~ 329 (879)
||................ ..|......++.+.+|+.+||..+|.+ |+++.++++||||....
T Consensus 204 g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~ 273 (332)
T cd05623 204 GETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID 273 (332)
T ss_pred CCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence 886554433333333222 233444456788999999999765544 68999999999998753
No 167
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=7.3e-30 Score=285.42 Aligned_cols=204 Identities=20% Similarity=0.211 Sum_probs=152.2
Q ss_pred ceeecccccccCCCCCCccccc----ccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 29 GVELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
...+...+|++++..++ ++.. +....+|+||||+++ +|.+++.. .+++..+..++.||+.||+|||++||+
T Consensus 74 ~~~l~~l~h~~ii~~~~-~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~iv 148 (364)
T cd07875 74 LVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGII 148 (364)
T ss_pred HHHHHhcCCCCccccce-eecccccccccCeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCee
Confidence 33455667888887766 4332 122457999999965 78787743 478999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+|||++.++.+||+|||+++..+...
T Consensus 149 H~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~------------------------------------------------ 180 (364)
T cd07875 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSF------------------------------------------------ 180 (364)
T ss_pred cCCCCHHHEEECCCCcEEEEeCCCccccCCCC------------------------------------------------
Confidence 99999999999999999999999996532110
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~e 264 (879)
......||+.|+|||++.+..++.++|||||||+|||
T Consensus 181 -------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e 217 (364)
T cd07875 181 -------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217 (364)
T ss_pred -------------------------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHH
Confidence 0012468999999999999899999999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhcccCC--------------------C--------------------chhhccChhhHHH
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHRVL--------------------P--------------------PQLLLKFPKEASF 301 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~~~--------------------~--------------------~~~~~~~~~~~~l 301 (879)
|++ ||............+..... + .........+.+|
T Consensus 218 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 297 (364)
T cd07875 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297 (364)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHH
Confidence 999 77544332221111110000 0 0000123457899
Q ss_pred HHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 302 CLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 302 i~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
|.+||+.||.+|||+.++|+||||...
T Consensus 298 l~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 298 LSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred HHHhcCcCcccCCCHHHHhcCcccccc
Confidence 999999999999999999999999753
No 168
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=2.2e-27 Score=231.56 Aligned_cols=271 Identities=15% Similarity=0.202 Sum_probs=220.5
Q ss_pred ceecccccCceEEEeecC---cEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccce
Q 002801 535 GWINPFLEGLCKYLSFSK---LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (879)
Q Consensus 535 ~~~~~~~d~~i~~w~~~~---~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~ 611 (879)
-++++..|..+++|+... ..++..+.. +|...|++++|+|.|++||+|+.|.++.||.-... ......
T Consensus 29 ilAscg~Dk~vriw~~~~~~s~~ck~vld~----~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~-----efecv~ 99 (312)
T KOG0645|consen 29 ILASCGTDKAVRIWSTSSGDSWTCKTVLDD----GHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDG-----EFECVA 99 (312)
T ss_pred EEEeecCCceEEEEecCCCCcEEEEEeccc----cchheeeeeeecCCCcEEEEeeccceEEEeecCCC-----ceeEEe
Confidence 368899999999999884 444444442 89999999999999999999999999999975432 222223
Q ss_pred EEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCC---eEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEE
Q 002801 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (879)
Q Consensus 612 ~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~---~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iw 688 (879)
..-+|...|.|++|++. +++||+++.|..|-||.+..+ .+...+++|+.-|-.+.|+| ...+|+|+|.|.+|++|
T Consensus 100 ~lEGHEnEVK~Vaws~s-G~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHP-t~dlL~S~SYDnTIk~~ 177 (312)
T KOG0645|consen 100 TLEGHENEVKCVAWSAS-GNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHP-TEDLLFSCSYDNTIKVY 177 (312)
T ss_pred eeeccccceeEEEEcCC-CCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcC-CcceeEEeccCCeEEEE
Confidence 33478999999999985 999999999999999998643 57788899999999999999 88999999999999999
Q ss_pred eCC---CCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEE
Q 002801 689 SIN---QGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSAS 764 (879)
Q Consensus 689 d~~---~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s 764 (879)
+-. ...+++++..+ ..|.+++|+|. |..|++++.|++|+||-....- -..|+.+++.+.|. ...|+|++
T Consensus 178 ~~~~dddW~c~~tl~g~~~TVW~~~F~~~-G~rl~s~sdD~tv~Iw~~~~~~-----~~~~sr~~Y~v~W~-~~~IaS~g 250 (312)
T KOG0645|consen 178 RDEDDDDWECVQTLDGHENTVWSLAFDNI-GSRLVSCSDDGTVSIWRLYTDL-----SGMHSRALYDVPWD-NGVIASGG 250 (312)
T ss_pred eecCCCCeeEEEEecCccceEEEEEecCC-CceEEEecCCcceEeeeeccCc-----chhcccceEeeeec-ccceEecc
Confidence 876 23678888865 46999999999 7899999999999999876321 12477899999997 67899999
Q ss_pred cCCcEEEEecCCCc-ccccCCceEEEeCCCCcEEEEEEecC-CCEEEEEeCCCcEEEEecC
Q 002801 765 TDNTLKLWDLSMCT-SRVIDTPLHSFTGHTNVKNFVGLSVW-DGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 765 ~D~~i~lwd~~~~~-~~~~~~~~~~~~~h~~~v~~v~~sp~-~~~lasgs~Dg~v~vw~~~ 823 (879)
.|+.|++|.-.... ..........-..|...||+|.|+|. ...|++||.||.|++|.+.
T Consensus 251 gD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 251 GDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred CCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 99999999876431 11111122234568889999999995 6699999999999999764
No 169
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=258.73 Aligned_cols=238 Identities=15% Similarity=0.204 Sum_probs=172.1
Q ss_pred cccccccccccCCCCCccccc--ccCceeec-ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCCh
Q 002801 5 LLRGERFGVRGDDSNDFELRK--HSDGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 81 (879)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~ 81 (879)
+..|...+|+-.+....+-|. .+++..+. +..|+|++-... +++|+. ..|||||-+.||+|..+|.+. ..+++
T Consensus 100 i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLie-fFEdd~--~FYLVfEKm~GGplLshI~~~-~~F~E 175 (463)
T KOG0607|consen 100 IQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIE-FFEDDT--RFYLVFEKMRGGPLLSHIQKR-KHFNE 175 (463)
T ss_pred eccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHH-Hhcccc--eEEEEEecccCchHHHHHHHh-hhccH
Confidence 345566666554443333222 23333333 478888877776 555544 579999999999999999655 57899
Q ss_pred hHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCC---eeeeecccccCCCCCCcccccccccccccCCCCCCcch
Q 002801 82 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (879)
Q Consensus 82 ~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (879)
.++..+.++|+.||+|||.+||+||||||+|||-..-++ ||||||.+.......
T Consensus 176 ~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~----------------------- 232 (463)
T KOG0607|consen 176 REASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN----------------------- 232 (463)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccC-----------------------
Confidence 999999999999999999999999999999999976654 799999987542111
Q ss_pred hhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccce
Q 002801 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (879)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (879)
.+-+++..| .....+|+..|
T Consensus 233 ----------~~~spastP--------------------------------------------------~L~tPvGSAEf 252 (463)
T KOG0607|consen 233 ----------NDCSPASTP--------------------------------------------------ELLTPVGSAEF 252 (463)
T ss_pred ----------CCCCCCCCc--------------------------------------------------cccCcccchhh
Confidence 000000000 12345899999
Q ss_pred ecccccc---C--CCCCccCcchhHHHHHHHhhc---CCCCCh---------h-----hHhHHhhhccc---CCCchhhc
Q 002801 239 ASPEELA---G--APVSCASDIYRLGVLLFELFC---PFSTGE---------E-----KTRTMSSLRHR---VLPPQLLL 293 (879)
Q Consensus 239 ~aPE~~~---~--~~~~~~sDIwSlGvil~ell~---pf~~~~---------~-----~~~~~~~~~~~---~~~~~~~~ 293 (879)
||||+.. + ..|+.++|.||||||||.||+ ||.+.- + .......+..+ +....|..
T Consensus 253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWah 332 (463)
T KOG0607|consen 253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAH 332 (463)
T ss_pred cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHH
Confidence 9999874 2 238999999999999999999 664321 1 11122333333 23456777
Q ss_pred cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 294 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 294 ~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
.+.+++++|..+|..||.+|.++.++++|||++...
T Consensus 333 IS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 333 ISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA 368 (463)
T ss_pred hhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence 888999999999999999999999999999998654
No 170
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.96 E-value=9.6e-30 Score=279.39 Aligned_cols=201 Identities=18% Similarity=0.221 Sum_probs=154.9
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
...|++++..+.+.+.+ ....|+||||++|++|.+++.+. ..+++.+++.|+.||+.||+|||++||+||||||+||
T Consensus 56 ~~~~~~~i~~~~~~~~~--~~~~~lv~Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Ni 132 (323)
T cd05615 56 LQDKPPFLTQLHSCFQT--VDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNV 132 (323)
T ss_pred hccCCCchhheeeEEec--CCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHe
Confidence 33444444433323332 34689999999999999999654 4689999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
|++.++.+||+|||+++.......
T Consensus 133 ll~~~~~ikL~Dfg~~~~~~~~~~-------------------------------------------------------- 156 (323)
T cd05615 133 MLDSEGHIKIADFGMCKEHMVDGV-------------------------------------------------------- 156 (323)
T ss_pred EECCCCCEEEeccccccccCCCCc--------------------------------------------------------
Confidence 999999999999999864211100
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......||+.|+|||++.+..++.++|||||||+||||++ ||.
T Consensus 157 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~ 202 (323)
T cd05615 157 ----------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 202 (323)
T ss_pred ----------------------------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCC
Confidence 0012468999999999998889999999999999999999 776
Q ss_pred CChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCc
Q 002801 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~ 329 (879)
...........+..... .+...++.+.+++.+||.++|.+|++ ..++++||||....
T Consensus 203 ~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~ 264 (323)
T cd05615 203 GEDEDELFQSIMEHNVS--YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRID 264 (323)
T ss_pred CCCHHHHHHHHHhCCCC--CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCC
Confidence 55443333333332221 22345678899999999999999997 47899999998653
No 171
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.2e-30 Score=256.42 Aligned_cols=188 Identities=18% Similarity=0.202 Sum_probs=159.2
Q ss_pred ccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeeccccc
Q 002801 51 EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCS 130 (879)
Q Consensus 51 ~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~ 130 (879)
..+..+++||||+.||.|+-+|.+. +.+++..++.+-.+|+.||.|||+++||.||||.+|.||+.+|++||+|||+|+
T Consensus 238 Qt~drlCFVMeyanGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCK 316 (516)
T KOG0690|consen 238 QTQDRLCFVMEYANGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCK 316 (516)
T ss_pred ccCceEEEEEEEccCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccch
Confidence 4566789999999999999999654 679999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccc
Q 002801 131 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 210 (879)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (879)
.--..
T Consensus 317 E~I~~--------------------------------------------------------------------------- 321 (516)
T KOG0690|consen 317 EEIKY--------------------------------------------------------------------------- 321 (516)
T ss_pred hcccc---------------------------------------------------------------------------
Confidence 62110
Q ss_pred cccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCC
Q 002801 211 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL 287 (879)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~ 287 (879)
.-.+..+||||.|.|||++....|+.++|+|.+||++|||+| ||+..........++.....
T Consensus 322 ---------------g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~k 386 (516)
T KOG0690|consen 322 ---------------GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLK 386 (516)
T ss_pred ---------------cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhcc
Confidence 112355799999999999999999999999999999999999 99876655544444554444
Q ss_pred CchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCcCc
Q 002801 288 PPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRDS 331 (879)
Q Consensus 288 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~~~ 331 (879)
.|. ..+++++.|+..+|.+||.+|.. +.||.+|+||..+...
T Consensus 387 FPr--~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~ 433 (516)
T KOG0690|consen 387 FPR--TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWE 433 (516)
T ss_pred CCc--cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHH
Confidence 333 45689999999999999999954 7899999999987654
No 172
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=5.1e-30 Score=291.25 Aligned_cols=205 Identities=16% Similarity=0.192 Sum_probs=154.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|+|++..++ ++.. ....|++||++. ++|.+++......+++.+++.|+.||+.||.|||++|||||||||
T Consensus 213 iL~~L~HpnIv~l~~-~~~~--~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP 288 (461)
T PHA03211 213 LLRRLSHPAVLALLD-VRVV--GGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKT 288 (461)
T ss_pred HHHHCCCCCCCcEEE-EEEE--CCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCH
Confidence 455678889888777 4443 345799999994 689998866556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||||+.++.+||+|||+++........
T Consensus 289 ~NILl~~~~~vkL~DFGla~~~~~~~~~---------------------------------------------------- 316 (461)
T PHA03211 289 ENVLVNGPEDICLGDFGAACFARGSWST---------------------------------------------------- 316 (461)
T ss_pred HHEEECCCCCEEEcccCCceeccccccc----------------------------------------------------
Confidence 9999999999999999998653111000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 317 ------------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~ 360 (461)
T PHA03211 317 ------------------------------------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTA 360 (461)
T ss_pred ------------------------------------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCC
Confidence 00012478999999999999999999999999999999986
Q ss_pred CCCCChh-------hHhHHhhhccc-----CCC-------------------------chh---hccChhhHHHHHHhcC
Q 002801 268 PFSTGEE-------KTRTMSSLRHR-----VLP-------------------------PQL---LLKFPKEASFCLWLLH 307 (879)
Q Consensus 268 pf~~~~~-------~~~~~~~~~~~-----~~~-------------------------~~~---~~~~~~~~~li~~~L~ 307 (879)
|++.... .......+... .++ +.+ ....+.+.+||.+||.
T Consensus 361 ~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 440 (461)
T PHA03211 361 SLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALT 440 (461)
T ss_pred CcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcc
Confidence 3433211 11111111110 000 001 1234567899999999
Q ss_pred CCCCCCCCHHHHhhcccccC
Q 002801 308 PEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 308 ~dP~~Rpt~~evl~hp~~~~ 327 (879)
.||.+|||+.|+|+||||+.
T Consensus 441 ~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 441 FDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred cChhhCcCHHHHhhCcccCC
Confidence 99999999999999999974
No 173
>PTZ00284 protein kinase; Provisional
Probab=99.96 E-value=7.6e-30 Score=294.37 Aligned_cols=179 Identities=16% Similarity=0.278 Sum_probs=137.3
Q ss_pred cCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCCCcceeeccCC-------------
Q 002801 54 IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFN------------- 119 (879)
Q Consensus 54 ~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlKP~NIll~~~~------------- 119 (879)
...||+||++ |++|.+++.+. +.+++.+++.|+.||+.||+|||+ .|||||||||+|||++..+
T Consensus 205 ~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 205 GHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred ceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 4578899888 78899998654 578999999999999999999998 5999999999999998665
Q ss_pred ---CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcc
Q 002801 120 ---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 196 (879)
Q Consensus 120 ---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (879)
.+||+|||.+.....
T Consensus 283 ~~~~vkl~DfG~~~~~~~-------------------------------------------------------------- 300 (467)
T PTZ00284 283 DPCRVRICDLGGCCDERH-------------------------------------------------------------- 300 (467)
T ss_pred CCceEEECCCCccccCcc--------------------------------------------------------------
Confidence 489999997743100
Q ss_pred eeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCCh
Q 002801 197 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE 273 (879)
Q Consensus 197 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~ 273 (879)
..+..+||+.|||||++.+..|+.++|||||||+||||++ ||....
T Consensus 301 -------------------------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 301 -------------------------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred -------------------------------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0123588999999999999999999999999999999999 775433
Q ss_pred hhHhH--HhhhcccCCCchh---------------------------------------hccChhhHHHHHHhcCCCCCC
Q 002801 274 EKTRT--MSSLRHRVLPPQL---------------------------------------LLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 274 ~~~~~--~~~~~~~~~~~~~---------------------------------------~~~~~~~~~li~~~L~~dP~~ 312 (879)
..... +..... .+|..+ ....+.+.+||.+||++||.+
T Consensus 350 ~~~~~~~i~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 350 NLEHLHLMEKTLG-RLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred hHHHHHHHHHHcC-CCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 22111 111000 000000 011245679999999999999
Q ss_pred CCCHHHHhhcccccCC
Q 002801 313 RPKMGELLQSEFLNEP 328 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~ 328 (879)
|||++|+|+||||...
T Consensus 429 R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 429 RLNARQMTTHPYVLKY 444 (467)
T ss_pred CCCHHHHhcCcccccc
Confidence 9999999999999864
No 174
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=8.4e-30 Score=284.35 Aligned_cols=205 Identities=19% Similarity=0.209 Sum_probs=151.4
Q ss_pred CceeecccccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
+...+...+|++++..++ ++.... ....|++|||+++ +|.+++.. .+++..+..++.||+.||+|||++||
T Consensus 70 E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~i 144 (359)
T cd07876 70 ELVLLKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGI 144 (359)
T ss_pred HHHHHHhCCCCCEeeeee-eeccCCCccccceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 334455667888887776 443221 2357999999965 57776633 47899999999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+||||||+|||++.++.+||+|||+++......
T Consensus 145 vHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 177 (359)
T cd07876 145 IHRDLKPSNIVVKSDCTLKILDFGLARTACTNF----------------------------------------------- 177 (359)
T ss_pred ccCCCCHHHEEECCCCCEEEecCCCccccccCc-----------------------------------------------
Confidence 999999999999999999999999986531110
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 178 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ 213 (359)
T cd07876 178 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 213 (359)
T ss_pred --------------------------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHH
Confidence 002247799999999999989999999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhc----------------------c-cCCC--------c---------hhhccChhhHH
Q 002801 264 ELFC---PFSTGEEKTRTMSSLR----------------------H-RVLP--------P---------QLLLKFPKEAS 300 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~----------------------~-~~~~--------~---------~~~~~~~~~~~ 300 (879)
||++ ||............+. . ...+ + ......+.+.+
T Consensus 214 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (359)
T cd07876 214 ELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARD 293 (359)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHH
Confidence 9999 7754432111100000 0 0000 0 00112356789
Q ss_pred HHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 301 FCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 301 li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||.+||..||++|||+.|+|+||||...
T Consensus 294 li~~mL~~dP~~R~t~~e~l~hp~~~~~ 321 (359)
T cd07876 294 LLSKMLVIDPDKRISVDEALRHPYITVW 321 (359)
T ss_pred HHHHHhccCcccCCCHHHHhcCchhhhh
Confidence 9999999999999999999999999753
No 175
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.4e-28 Score=272.01 Aligned_cols=246 Identities=22% Similarity=0.377 Sum_probs=218.1
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceE
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i 696 (879)
.+.+..++|+|. ..+|+++-..|.|++||.+-+.++..|.+|.++|..|+|+| +..+|+||++|.+|++|+..+.+++
T Consensus 9 SsRvKglsFHP~-rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 9 SSRVKGLSFHPK-RPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRRCL 86 (1202)
T ss_pred cccccceecCCC-CCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecC-CCCeEEecCCccEEEEEecccceeh
Confidence 457899999996 89999999999999999999999999999999999999999 8889999999999999999999999
Q ss_pred EEEecCC-ceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEec
Q 002801 697 GTIKTKA-NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDL 774 (879)
Q Consensus 697 ~~~~~~~-~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~ 774 (879)
.++..|- -|..+.||+. -.+|+++|.|.+|+||+..+.+. ++.+.||...|.|..|+ ..+.++|+|-|.+||+||+
T Consensus 87 ftL~GHlDYVRt~~FHhe-yPWIlSASDDQTIrIWNwqsr~~-iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDi 164 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHE-YPWILSASDDQTIRIWNWQSRKC-IAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDI 164 (1202)
T ss_pred hhhccccceeEEeeccCC-CceEEEccCCCeEEEEeccCCce-EEEEecCceEEEeeccCCccceEEEecccceEEEEee
Confidence 9888664 5999999998 67999999999999999998884 99999999999999999 7999999999999999998
Q ss_pred CCCccc-------------------cc---C-CceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceec
Q 002801 775 SMCTSR-------------------VI---D-TPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSF 831 (879)
Q Consensus 775 ~~~~~~-------------------~~---~-~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~ 831 (879)
...... .. + ...+.+.||...||.++|+|.-..|++|+.|+.|++|.+...+.
T Consensus 165 sGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKa---- 240 (1202)
T KOG0292|consen 165 SGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA---- 240 (1202)
T ss_pred cchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccc----
Confidence 653211 00 1 12346679999999999999999999999999999999875431
Q ss_pred ccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 832 NFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 832 ~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
+.-....+|...|+++-|+|... ++++.|.|++|+||||
T Consensus 241 -------WEvDtcrgH~nnVssvlfhp~q~-lIlSnsEDksirVwDm 279 (1202)
T KOG0292|consen 241 -------WEVDTCRGHYNNVSSVLFHPHQD-LILSNSEDKSIRVWDM 279 (1202)
T ss_pred -------eeehhhhcccCCcceEEecCccc-eeEecCCCccEEEEec
Confidence 22234478999999999999999 9999999999999997
No 176
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.96 E-value=7.9e-30 Score=283.77 Aligned_cols=201 Identities=21% Similarity=0.189 Sum_probs=153.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+.+++|.... .+++..+..|++||+.||+|||++||+||||||
T Consensus 125 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp 196 (353)
T PLN00034 125 ILRDVNHPNVVKCHD-MFDH--NGEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHIVHRDIKP 196 (353)
T ss_pred HHHhCCCCCcceeee-Eecc--CCeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCH
Confidence 455667888888776 4433 44689999999999987543 356788899999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.......
T Consensus 197 ~NIll~~~~~~kL~DfG~~~~~~~~~~----------------------------------------------------- 223 (353)
T PLN00034 197 SNLLINSAKNVKIADFGVSRILAQTMD----------------------------------------------------- 223 (353)
T ss_pred HHEEEcCCCCEEEcccccceecccccc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~el 265 (879)
.....+||..|+|||++.. ...+.++|||||||+||||
T Consensus 224 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el 266 (353)
T PLN00034 224 -------------------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEF 266 (353)
T ss_pred -------------------------------------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHH
Confidence 0012478999999998843 2346799999999999999
Q ss_pred hc---CCCCCh--hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 266 FC---PFSTGE--EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 266 l~---pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
++ ||.... .....+..+.....+......++.+.+||.+||..||++||++.|+++||||....
T Consensus 267 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 267 YLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred HhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 99 775322 11222222222233333445677899999999999999999999999999998754
No 177
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.96 E-value=1.3e-29 Score=279.34 Aligned_cols=204 Identities=16% Similarity=0.224 Sum_probs=156.2
Q ss_pred cccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
...+|++++..+. ++.+ ....|+||||+.|++|.+++.+....+++..++.++.||+.||+|||++||+||||||+|
T Consensus 56 ~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N 132 (331)
T cd05597 56 VNGDRRWITNLHY-AFQD--ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDN 132 (331)
T ss_pred HhCCCCCCCceEE-EEec--CCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHH
Confidence 3456777776665 4433 346899999999999999997655678999999999999999999999999999999999
Q ss_pred eeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccc
Q 002801 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (879)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (879)
||++.++.+||+|||++.........
T Consensus 133 ill~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------------------ 158 (331)
T cd05597 133 VLLDKNGHIRLADFGSCLRLLADGTV------------------------------------------------------ 158 (331)
T ss_pred EEECCCCCEEEEECCceeecCCCCCc------------------------------------------------------
Confidence 99999999999999998653211000
Q ss_pred cCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHHHhhc
Q 002801 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~ell~ 267 (879)
.....+||+.|+|||++.+ ..++.++|||||||+||||++
T Consensus 159 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 203 (331)
T cd05597 159 -----------------------------------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLY 203 (331)
T ss_pred -----------------------------------cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhh
Confidence 0012478999999999973 347889999999999999999
Q ss_pred ---CCCCChhhHhHHhhhccc---CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~ 328 (879)
||............+... ..++.....++.+.+|+.+||..++.+ ||++.++++||||...
T Consensus 204 g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 204 GETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 886554333322222221 233334446788999999988764443 7899999999999874
No 178
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.96 E-value=3e-30 Score=284.31 Aligned_cols=225 Identities=19% Similarity=0.233 Sum_probs=166.4
Q ss_pred ccccccccccCCCCCcccccccCcee-ecccc------cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-C
Q 002801 6 LRGERFGVRGDDSNDFELRKHSDGVE-LTHGD------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-R 77 (879)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~ 77 (879)
..|+.|+++=-...-+.+|.+...+. |.+.+ -.++|..++ . .-...+++||.|++ +.+|.++|+.+. .
T Consensus 209 ~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d-~--F~fr~HlciVfELL-~~NLYellK~n~f~ 284 (586)
T KOG0667|consen 209 KTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLD-Y--FYFRNHLCIVFELL-STNLYELLKNNKFR 284 (586)
T ss_pred CCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeee-c--cccccceeeeehhh-hhhHHHHHHhcCCC
Confidence 45677777776666666666633333 22222 233455555 2 23466889999998 789999996543 4
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccC--CCeeeeecccccCCCCCCcccccccccccccCCCCCC
Q 002801 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155 (879)
Q Consensus 78 ~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (879)
.|+...++.|++||+.||.+||+.||||+|||||||||..- ..||+||||++.....
T Consensus 285 Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q--------------------- 343 (586)
T KOG0667|consen 285 GLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ--------------------- 343 (586)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCC---------------------
Confidence 68999999999999999999999999999999999999643 4799999999865211
Q ss_pred cchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccc
Q 002801 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 235 (879)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt 235 (879)
.....+.+
T Consensus 344 ------------------------------------------------------------------------~vytYiQS 351 (586)
T KOG0667|consen 344 ------------------------------------------------------------------------RVYTYIQS 351 (586)
T ss_pred ------------------------------------------------------------------------cceeeeec
Confidence 11235778
Q ss_pred cceeccccccCCCCCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhccc----------------------------
Q 002801 236 NWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR---------------------------- 285 (879)
Q Consensus 236 ~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~~~---------------------------- 285 (879)
..|+|||+|.|.+|+.+.||||||||+.||++ |+++++.....+..+.+-
T Consensus 352 RfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~ 431 (586)
T KOG0667|consen 352 RFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRL 431 (586)
T ss_pred cccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceee
Confidence 99999999999999999999999999999999 877776555444322110
Q ss_pred --------------------------CCCchh-------h-ccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 286 --------------------------VLPPQL-------L-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 286 --------------------------~~~~~~-------~-~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
..|+.. . .....+.+|+.+||..||.+|+|+.|+|+||||..
T Consensus 432 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 432 CVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred eeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence 001000 0 00123579999999999999999999999999984
No 179
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.96 E-value=1.1e-29 Score=283.98 Aligned_cols=203 Identities=15% Similarity=0.171 Sum_probs=156.1
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+.+ ....|+||||++|++|.++++.. .+++..++.++.||+.||.|||++||+||||||+
T Consensus 97 ~~~~~hp~iv~~~~-~~~~--~~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~ 171 (371)
T cd05622 97 MAFANSPWVVQLFY-AFQD--DRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPD 171 (371)
T ss_pred HHhCCCCCCCeEEE-EEEc--CCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence 34467888888776 4432 44689999999999999999653 5899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++++||+|||+++........
T Consensus 172 NIll~~~~~ikL~DfG~a~~~~~~~~~----------------------------------------------------- 198 (371)
T cd05622 172 NMLLDKSGHLKLADFGTCMKMNKEGMV----------------------------------------------------- 198 (371)
T ss_pred HEEECCCCCEEEEeCCceeEcCcCCcc-----------------------------------------------------
Confidence 999999999999999998653211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC----CCccCcchhHHHHHHHhhc
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvil~ell~ 267 (879)
.....+||+.|+|||++.+.. ++.++|||||||+||||++
T Consensus 199 ------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~ 242 (371)
T cd05622 199 ------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 242 (371)
T ss_pred ------------------------------------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh
Confidence 012247899999999997543 7899999999999999999
Q ss_pred ---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~ 328 (879)
||............+... ...+.....++.+.+||.+||..++.+ |++++++++||||...
T Consensus 243 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 243 GDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 886554433333322221 122333456788899999999854443 7899999999999764
No 180
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=6e-30 Score=303.32 Aligned_cols=206 Identities=17% Similarity=0.177 Sum_probs=160.2
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhc-----
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ----- 101 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~----- 101 (879)
..+....|++++.+++ ++.++....+||||||+.+++|.++|.. ....+++..++.|+.||+.||+|||+.
T Consensus 64 ~IL~~L~HPNIVrl~d-~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~ 142 (1021)
T PTZ00266 64 NVMRELKHKNIVRYID-RFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPN 142 (1021)
T ss_pred HHHHHcCCCCcCeEEE-EEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3455678888888777 4444455568999999999999999853 235689999999999999999999984
Q ss_pred --CcccccCCCcceeecc-----------------CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhh
Q 002801 102 --GIVVHNVRPSCFVMSS-----------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 102 --givHrDlKP~NIll~~-----------------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
+||||||||+||||+. .+.+||+|||+++.......
T Consensus 143 ~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~------------------------- 197 (1021)
T PTZ00266 143 GERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM------------------------- 197 (1021)
T ss_pred cCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc-------------------------
Confidence 4999999999999964 23489999999865321100
Q ss_pred hhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccc
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
....+||+.|+|||
T Consensus 198 ------------------------------------------------------------------~~s~vGTp~YmAPE 211 (1021)
T PTZ00266 198 ------------------------------------------------------------------AHSCVGTPYYWSPE 211 (1021)
T ss_pred ------------------------------------------------------------------ccccCCCccccCHH
Confidence 01247899999999
Q ss_pred cccCC--CCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 243 ELAGA--PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 243 ~~~~~--~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
++.+. .++.++||||||||||||++ ||.........+..+...... .....++.+.+||..||..+|.+||++.
T Consensus 212 vL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~l-pi~~~S~eL~dLI~~~L~~dPeeRPSa~ 290 (1021)
T PTZ00266 212 LLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDL-PIKGKSKELNILIKNLLNLSAKERPSAL 290 (1021)
T ss_pred HHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCC-CcCCCCHHHHHHHHHHhcCChhHCcCHH
Confidence 99653 48999999999999999999 886655544444444433222 2234567899999999999999999999
Q ss_pred HHhhcccccCC
Q 002801 318 ELLQSEFLNEP 328 (879)
Q Consensus 318 evl~hp~~~~~ 328 (879)
|+|+||||...
T Consensus 291 QlL~h~~ik~i 301 (1021)
T PTZ00266 291 QCLGYQIIKNV 301 (1021)
T ss_pred HHhccHHHhhc
Confidence 99999999643
No 181
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-30 Score=258.26 Aligned_cols=226 Identities=18% Similarity=0.223 Sum_probs=171.2
Q ss_pred cccccccccccCCCC----CcccccccCceeecccccccCCCCCCccccc----ccccCceEEEEeeCCcchhhhhcCCC
Q 002801 5 LLRGERFGVRGDDSN----DFELRKHSDGVELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDKPK 76 (879)
Q Consensus 5 ~~~~~~~~~~~~~~~----~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lv~e~~~g~sL~~~l~~~~ 76 (879)
.+.+.+++.+.+..+ .+.-|..++.....+.+|+|+++++. +... +...+.|+|||++ ..+|.+.+.
T Consensus 38 ~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n-~ftP~~~l~~~~e~y~v~e~m-~~nl~~vi~--- 112 (369)
T KOG0665|consen 38 QVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLN-VFTPQKTLEEFQEVYLVMELM-DANLCQVIL--- 112 (369)
T ss_pred hhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeee-ccCccccHHHHHhHHHHHHhh-hhHHHHHHH---
Confidence 455667777665544 22337778888899999999999888 3322 3345789999999 678998875
Q ss_pred CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCc
Q 002801 77 RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLP 156 (879)
Q Consensus 77 ~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (879)
-.++-..+..|+.|++.|+.|||+.||+||||||+||++..+..+|+.|||+|+..+.+
T Consensus 113 ~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~--------------------- 171 (369)
T KOG0665|consen 113 MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD--------------------- 171 (369)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc---------------------
Confidence 23678899999999999999999999999999999999999999999999999663211
Q ss_pred chhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccccccc
Q 002801 157 LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236 (879)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~ 236 (879)
+.++..++|.
T Consensus 172 ----------------------------------------------------------------------~~mtpyVvtR 181 (369)
T KOG0665|consen 172 ----------------------------------------------------------------------FMMTPYVVTR 181 (369)
T ss_pred ----------------------------------------------------------------------cccCchhhee
Confidence 1346679999
Q ss_pred ceeccccccCCCCCccCcchhHHHHHHHhhc--CCCCChhhHhHH---------------hhhcc---------------
Q 002801 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTM---------------SSLRH--------------- 284 (879)
Q Consensus 237 ~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~---------------~~~~~--------------- 284 (879)
.|+|||++.+..|...+||||+||++.||+. -++++..+...+ ..+..
T Consensus 182 yyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~ 261 (369)
T KOG0665|consen 182 YYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAI 261 (369)
T ss_pred eccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhcc
Confidence 9999999999999999999999999999998 222232222111 11100
Q ss_pred ---cCCC-----chh---hccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 285 ---RVLP-----PQL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 285 ---~~~~-----~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
..+| ... ......+.+++.+||..+|++|.+++++|+|||++
T Consensus 262 ~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 262 SFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred chhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 0011 000 01123467999999999999999999999999997
No 182
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=1.2e-29 Score=272.48 Aligned_cols=205 Identities=16% Similarity=0.181 Sum_probs=157.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..+. .+. .....|++|||+.|++|..++.. ....+++..+..++.||+.||+|||+.||+|||||
T Consensus 46 il~~l~hp~i~~~~~-~~~--~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dik 122 (277)
T cd05607 46 ILEKVNSPFIVNLAY-AFE--SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMK 122 (277)
T ss_pred HHHhcCCCcEEEEEE-EEe--cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCC
Confidence 455667888877655 333 34568999999999999988843 33458999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++|+|||++.......
T Consensus 123 p~Nili~~~~~~~l~Dfg~~~~~~~~~----------------------------------------------------- 149 (277)
T cd05607 123 PENVLLDDQGNCRLSDLGLAVELKDGK----------------------------------------------------- 149 (277)
T ss_pred hHhEEEcCCCCEEEeeceeeeecCCCc-----------------------------------------------------
Confidence 999999999999999999986531110
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......||..|+|||++.+..++.++|||||||+||||++
T Consensus 150 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~ 191 (277)
T cd05607 150 --------------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR 191 (277)
T ss_pred --------------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCC
Confidence 0012367889999999998889999999999999999999
Q ss_pred -CCCCChhhH---hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH----HHHhhcccccCCc
Q 002801 268 -PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~evl~hp~~~~~~ 329 (879)
||....... ...........+......++.+.+|+.+||.+||.+||++ .+++.||||+...
T Consensus 192 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 192 TPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred CCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 775432211 1112222222222223466788999999999999999999 6788999998754
No 183
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.96 E-value=1.2e-29 Score=278.13 Aligned_cols=208 Identities=17% Similarity=0.153 Sum_probs=148.3
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC--------CCCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~--------~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
...+...+|+|++..+. ++........|++|||+. ++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 49 ~~~l~~l~h~niv~~~~-~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~ 126 (317)
T cd07867 49 IALLRELKHPNVIALQK-VFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA 126 (317)
T ss_pred HHHHHhCCCCCeeeEEE-EEeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 33455567888877666 554455567899999986 478777631 12358899999999999999999999
Q ss_pred cCcccccCCCcceee----ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccC
Q 002801 101 QGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (879)
Q Consensus 101 ~givHrDlKP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (879)
+||+||||||+|||+ +..+.+||+|||+++.........
T Consensus 127 ~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~------------------------------------- 169 (317)
T cd07867 127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL------------------------------------- 169 (317)
T ss_pred CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccc-------------------------------------
Confidence 999999999999999 456789999999997642210000
Q ss_pred CCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcc
Q 002801 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDI 255 (879)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDI 255 (879)
.......||+.|+|||++.+. .++.++||
T Consensus 170 --------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 199 (317)
T cd07867 170 --------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAIDI 199 (317)
T ss_pred --------------------------------------------------cccCcceecccccCcHHhcCCCccCcHHHH
Confidence 001224789999999999774 48999999
Q ss_pred hhHHHHHHHhhc---CCCCChhhHh---------H---Hh-----------hhcc-------------cCC---------
Q 002801 256 YRLGVLLFELFC---PFSTGEEKTR---------T---MS-----------SLRH-------------RVL--------- 287 (879)
Q Consensus 256 wSlGvil~ell~---pf~~~~~~~~---------~---~~-----------~~~~-------------~~~--------- 287 (879)
|||||++|||++ ||........ . .. .+.. ...
T Consensus 200 wSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (317)
T cd07867 200 WAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYM 279 (317)
T ss_pred HhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhh
Confidence 999999999999 6643221100 0 00 0000 000
Q ss_pred CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 288 PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 288 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
..........+.+|+.+||..||.+|||+.|+|+||||
T Consensus 280 ~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 280 EKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00001123456789999999999999999999999998
No 184
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96 E-value=1.9e-29 Score=270.03 Aligned_cols=199 Identities=15% Similarity=0.159 Sum_probs=152.5
Q ss_pred ccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 36 DHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+|++++..++ .+.++. ....|++|||+.+++|.+++... ...+++..++.++.||+.||+|||++||+||||||
T Consensus 61 ~h~~i~~~~~-~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~ 139 (272)
T cd06637 61 HHRNIATYYG-AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKG 139 (272)
T ss_pred CCCCeeeEee-EEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCH
Confidence 5777776665 333221 23579999999999999999653 34689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++........
T Consensus 140 ~nili~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------------- 166 (272)
T cd06637 140 QNVLLTENAEVKLVDFGVSAQLDRTVG----------------------------------------------------- 166 (272)
T ss_pred HHEEECCCCCEEEccCCCceecccccc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil~el 265 (879)
......|+..|+|||++. +..++.++|||||||++|||
T Consensus 167 -------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el 209 (272)
T cd06637 167 -------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 209 (272)
T ss_pred -------------------------------------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHH
Confidence 012247889999999986 33588999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
++ ||.........................+..+.+|+.+||..+|.+|||+.+++.||||
T Consensus 210 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 210 AEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 99 6654433333322222222222223455788999999999999999999999999997
No 185
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.96 E-value=1.1e-29 Score=277.33 Aligned_cols=205 Identities=13% Similarity=0.172 Sum_probs=154.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+++ +|.+++......+++.+++.++.||+.||+|||++||+||||||
T Consensus 57 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp 132 (309)
T cd07872 57 LLKDLKHANIVTLHD-IVHT--DKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKP 132 (309)
T ss_pred HHHhCCCCCcceEEE-EEee--CCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 445567888888777 4443 3468999999975 89888866556689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.......
T Consensus 133 ~Nill~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------------- 159 (309)
T cd07872 133 QNLLINERGELKLADFGLARAKSVPTK----------------------------------------------------- 159 (309)
T ss_pred HHEEECCCCCEEECccccceecCCCcc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~-- 267 (879)
......+|+.|+|||.+.+. .++.++|||||||++|||++
T Consensus 160 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~ 202 (309)
T cd07872 160 -------------------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGR 202 (309)
T ss_pred -------------------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 00113678899999998764 58999999999999999999
Q ss_pred -CCCCChhhHhHHhhhc--cc------------------CCC--------chhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 -PFSTGEEKTRTMSSLR--HR------------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~--~~------------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||.............+ .. ..+ ......++.+.+||.+||..||.+|||+.|
T Consensus 203 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e 282 (309)
T cd07872 203 PLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEE 282 (309)
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHH
Confidence 6654332221111110 00 000 011234567889999999999999999999
Q ss_pred HhhcccccCCc
Q 002801 319 LLQSEFLNEPR 329 (879)
Q Consensus 319 vl~hp~~~~~~ 329 (879)
+++||||+...
T Consensus 283 ~l~h~~~~~~~ 293 (309)
T cd07872 283 AMKHAYFRSLG 293 (309)
T ss_pred HhcChhhhhcc
Confidence 99999998654
No 186
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96 E-value=7.9e-30 Score=284.16 Aligned_cols=206 Identities=19% Similarity=0.221 Sum_probs=152.3
Q ss_pred CceeecccccccCCCCCCcccccc----cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
+...+...+|++++..++ ++... .....|++|||+++ +|.+++.. .+++..+..++.||+.||+|||++||
T Consensus 66 E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~gi 140 (355)
T cd07874 66 ELVLMKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGI 140 (355)
T ss_pred HHHHHHHhCCCchhceee-eeeccccccccceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 334455567888887766 43322 22357999999965 67777743 47899999999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+||||||+|||++.++.+||+|||+++......
T Consensus 141 vHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 173 (355)
T cd07874 141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------------------------------------- 173 (355)
T ss_pred ccCCCChHHEEECCCCCEEEeeCcccccCCCcc-----------------------------------------------
Confidence 999999999999999999999999986532110
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
......||+.|+|||++.+..++.++|||||||+||
T Consensus 174 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ 209 (355)
T cd07874 174 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209 (355)
T ss_pred --------------------------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHH
Confidence 001247899999999999988999999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhcc----------------------c------CCCc------------hhhccChhhHH
Q 002801 264 ELFC---PFSTGEEKTRTMSSLRH----------------------R------VLPP------------QLLLKFPKEAS 300 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~~----------------------~------~~~~------------~~~~~~~~~~~ 300 (879)
||++ ||............+.. . ..+. ........+.+
T Consensus 210 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
T cd07874 210 EMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 289 (355)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHH
Confidence 9999 77544322111110000 0 0000 00112345789
Q ss_pred HHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 301 FCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 301 li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
||.+||..||++|||+.|+|+||||....
T Consensus 290 li~~mL~~dP~~Rps~~ell~hp~~~~~~ 318 (355)
T cd07874 290 LLSKMLVIDPAKRISVDEALQHPYINVWY 318 (355)
T ss_pred HHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence 99999999999999999999999997543
No 187
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=4.6e-27 Score=287.79 Aligned_cols=278 Identities=15% Similarity=0.237 Sum_probs=218.5
Q ss_pred CceecccccCceEEEeecCcEEE-EEec--cccccCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCccccc
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVK-ADLN--QGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHY 609 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~-~~l~--~~~l~~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~ 609 (879)
..++++..|+.|++|+..+.... .... ... ..+...|.+++|++ ++.+||+|+.||+|+|||+.+...
T Consensus 496 ~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~------- 567 (793)
T PLN00181 496 EFFATAGVNKKIKIFECESIIKDGRDIHYPVVE-LASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQL------- 567 (793)
T ss_pred CEEEEEeCCCEEEEEECCcccccccccccceEE-ecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeE-------
Confidence 44689999999999997642100 0000 011 13346899999987 578999999999999999875311
Q ss_pred ceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEe
Q 002801 610 PVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (879)
Q Consensus 610 ~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd 689 (879)
......|...|.+++|+|.++.+|++|+.||+|++||+.+++.+..+..+ ..|+++.|++.++.+|++|+.||.|++||
T Consensus 568 ~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD 646 (793)
T PLN00181 568 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYD 646 (793)
T ss_pred EEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEE
Confidence 11223588899999999877899999999999999999999988888654 68999999765799999999999999999
Q ss_pred CCCCc-eEEEEe-cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCC-----ceeeEEEccCCCCEEEEEEc-CCCEEE
Q 002801 690 INQGV-SIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS-----KIPLCTLIGHNKTVSYVKFV-DATTLV 761 (879)
Q Consensus 690 ~~~~~-~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~-----~~~~~~~~~h~~~V~~v~fs-~~~~l~ 761 (879)
+++.. ++.++. +...|.++.|. + +.+|++++.|++|++||++.. ..++..+.+|...+..+.|+ ++.+|+
T Consensus 647 ~~~~~~~~~~~~~h~~~V~~v~f~-~-~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~la 724 (793)
T PLN00181 647 LRNPKLPLCTMIGHSKTVSYVRFV-D-SSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIA 724 (793)
T ss_pred CCCCCccceEecCCCCCEEEEEEe-C-CCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEE
Confidence 98765 455555 45679999997 4 678999999999999999853 23578899999999999999 899999
Q ss_pred EEEcCCcEEEEecCCCcccc-----cCCce--EEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEec
Q 002801 762 SASTDNTLKLWDLSMCTSRV-----IDTPL--HSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 762 s~s~D~~i~lwd~~~~~~~~-----~~~~~--~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~ 822 (879)
+|+.|++|++|+........ ....+ .....|...|++++|+|++.+|++|+.||.|+||++
T Consensus 725 sgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 725 TGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 99999999999987542100 00001 112345567999999999999999999999999986
No 188
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.96 E-value=1.6e-29 Score=283.43 Aligned_cols=209 Identities=18% Similarity=0.216 Sum_probs=155.4
Q ss_pred CceeecccccccCCCCCCccccccc---ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
+...+...+|+|++..++ ++.++. ....|++|||+. ++|.+++... ..+++.+++.+++||+.||.|||++||+
T Consensus 49 E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~iv 125 (372)
T cd07853 49 ELKMLCFFKHDNVLSALD-ILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAGIL 125 (372)
T ss_pred HHHHHHhCCCCCcCCHhh-eecCCCccccceEEEEeeccc-cCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 333455667888888776 444332 125799999996 5888888554 5789999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+|||++.++.+||+|||+++........
T Consensus 126 H~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~---------------------------------------------- 159 (372)
T cd07853 126 HRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK---------------------------------------------- 159 (372)
T ss_pred CCCCChHHEEECCCCCEEeccccceeecccCccc----------------------------------------------
Confidence 9999999999999999999999998653111000
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ 263 (879)
..+...+|++|+|||++.+.. ++.++|||||||++|
T Consensus 160 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 196 (372)
T cd07853 160 -------------------------------------------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFA 196 (372)
T ss_pred -------------------------------------------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHH
Confidence 012236789999999998754 899999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhh----------------------h-cccCCCch-------hhccChhhHHHHHHhcCCCC
Q 002801 264 ELFC---PFSTGEEKTRTMSS----------------------L-RHRVLPPQ-------LLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~----------------------~-~~~~~~~~-------~~~~~~~~~~li~~~L~~dP 310 (879)
||++ ||............ + .....++. ....++.+.+||.+||+.||
T Consensus 197 el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP 276 (372)
T cd07853 197 ELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDP 276 (372)
T ss_pred HHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCCh
Confidence 9999 66543322111100 0 11111111 12235678899999999999
Q ss_pred CCCCCHHHHhhcccccCC
Q 002801 311 SGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 311 ~~Rpt~~evl~hp~~~~~ 328 (879)
.+|||+.|+++||||...
T Consensus 277 ~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 277 DKRISAADALAHPYLDEG 294 (372)
T ss_pred hhCcCHHHHhcCHhhCCC
Confidence 999999999999999864
No 189
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.96 E-value=1.7e-29 Score=272.57 Aligned_cols=205 Identities=15% Similarity=0.150 Sum_probs=159.5
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
..+.+.+|++++..++ .+.+ ....|++|||+.|++|..++.. ....+++.++..++.||+.||.|||+.||+||||
T Consensus 52 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl 128 (285)
T cd05605 52 QILEKVNSRFVVSLAY-AYET--KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDL 128 (285)
T ss_pred HHHHhcCCCCEeeeee-eecC--CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCC
Confidence 3455667888877766 4433 3468999999999999998843 3346899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||+++......
T Consensus 129 kp~Nil~~~~~~~~l~Dfg~~~~~~~~~---------------------------------------------------- 156 (285)
T cd05605 129 KPENILLDDYGHIRISDLGLAVEIPEGE---------------------------------------------------- 156 (285)
T ss_pred CHHHEEECCCCCEEEeeCCCceecCCCC----------------------------------------------------
Confidence 9999999999999999999986531100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.....+|++.|+|||++.+..++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g 197 (285)
T cd05605 157 ---------------------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEG 197 (285)
T ss_pred ---------------------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHC
Confidence 0012368999999999998889999999999999999998
Q ss_pred --CCCCChhhHh---HHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 --PFSTGEEKTR---TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 --pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||........ ....+.. ..+..+...++.+.+|+.+||..||.+|| +++++++||||....
T Consensus 198 ~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 198 KSPFRQRKEKVKREEVERRVKE-DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred CCCCCCCchhhHHHHHHHHhhh-cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence 7765432211 1122221 11222334567789999999999999999 899999999998643
No 190
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=5e-30 Score=291.51 Aligned_cols=202 Identities=21% Similarity=0.283 Sum_probs=154.8
Q ss_pred cccccCCCCCCcccc---ccc-ccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcC--ccccc
Q 002801 35 GDHLRNQGGLSGVCE---NEA-AIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG--IVVHN 107 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~---~~~-~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~g--ivHrD 107 (879)
..|+|+|.+++.... ... ....+|.||||.||+|-++|++ ....|++.++++||.|+++||.+||.+. |||||
T Consensus 92 ~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRD 171 (738)
T KOG1989|consen 92 SGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRD 171 (738)
T ss_pred cCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhh
Confidence 478888887772111 222 3568999999999999999942 2345999999999999999999999998 99999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCC-cccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDS-HEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||-|||||+.+|+.||||||.+...-... ...++
T Consensus 172 LKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~--------------------------------------------- 206 (738)
T KOG1989|consen 172 LKIENVLLSADGNYKLCDFGSATTKILSPTSAQEV--------------------------------------------- 206 (738)
T ss_pred hhhhheEEcCCCCEEeCcccccccccCCCccHHHH---------------------------------------------
Confidence 99999999999999999999986521110 00000
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHH
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ 263 (879)
..++.+ ....-|+.|+|||++. +.+.+.|+|||+|||+||
T Consensus 207 --------------------------~~ve~e-----------I~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLY 249 (738)
T KOG1989|consen 207 --------------------------NYVEEE-----------IEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLY 249 (738)
T ss_pred --------------------------HHHHHH-----------HHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHH
Confidence 000000 1123489999999884 677999999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
-|+. ||..... ..++......|.+..++..+.+||..||+.||.+||++.+++.+
T Consensus 250 kLCy~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 250 KLCYFTTPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred HHHHhCCCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 9987 9965432 24455555556667788899999999999999999999999874
No 191
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.4e-29 Score=285.58 Aligned_cols=208 Identities=15% Similarity=0.173 Sum_probs=155.5
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+...+|++++..+. ++.+ ....|++||++. ++|.+++.. ...+++.+++.|+.||+.||.|||++||||||
T Consensus 136 E~~il~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givHrD 210 (392)
T PHA03207 136 EIDILKTISHRAIINLIH-AYRW--KSTVCMVMPKYK-CDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIHRD 210 (392)
T ss_pred HHHHHHhcCCCCccceee-eEee--CCEEEEEehhcC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 333455677888888776 3332 346799999995 689999843 35789999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++..+.++|+|||+++........
T Consensus 211 lkp~Nill~~~~~~~l~DfG~a~~~~~~~~~------------------------------------------------- 241 (392)
T PHA03207 211 VKTENIFLDEPENAVLGDFGAACKLDAHPDT------------------------------------------------- 241 (392)
T ss_pred CCHHHEEEcCCCCEEEccCccccccCccccc-------------------------------------------------
Confidence 9999999999999999999998653211000
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
.......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 242 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~ 282 (392)
T PHA03207 242 ---------------------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSV 282 (392)
T ss_pred ---------------------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHH
Confidence 00122478999999999999899999999999999999998
Q ss_pred ---CCCCChhhH------hHHhhhc----------------------ccCCC----chh---hccChhhHHHHHHhcCCC
Q 002801 268 ---PFSTGEEKT------RTMSSLR----------------------HRVLP----PQL---LLKFPKEASFCLWLLHPE 309 (879)
Q Consensus 268 ---pf~~~~~~~------~~~~~~~----------------------~~~~~----~~~---~~~~~~~~~li~~~L~~d 309 (879)
||+...... .....+. ....+ +.. ......+.+||.+||..|
T Consensus 283 g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d 362 (392)
T PHA03207 283 KNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFD 362 (392)
T ss_pred CCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccC
Confidence 775532110 0000000 00000 000 123456789999999999
Q ss_pred CCCCCCHHHHhhcccccCC
Q 002801 310 PSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 310 P~~Rpt~~evl~hp~~~~~ 328 (879)
|.+|||+.|+|.||||...
T Consensus 363 p~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 363 QEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred hhhCCCHHHHhhCchhhcc
Confidence 9999999999999999753
No 192
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=9.7e-28 Score=267.83 Aligned_cols=251 Identities=21% Similarity=0.397 Sum_probs=208.3
Q ss_pred cccc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCc----------------------------ccC----------
Q 002801 562 GDLL-NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA----------------------------IIN---------- 602 (879)
Q Consensus 562 ~~l~-~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~----------------------------~~~---------- 602 (879)
+.+. .|.+.|+++.||+||+|||+||.|+.|+||.+.. ...
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3444 8999999999999999999999999999998754 000
Q ss_pred ----cCcc----------cccceEE-eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEE
Q 002801 603 ----ENRD----------IHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSID 667 (879)
Q Consensus 603 ----~~~~----------~~~~~~~-~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~ 667 (879)
.... ...|+.+ .+|...|.+|+|+. .++|+|++.|.+|++|++...+++..| .|..-|+||+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F-~HndfVTcVa 416 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVF-SHNDFVTCVA 416 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEE-ecCCeeEEEE
Confidence 0000 0012222 36999999999997 799999999999999999999999999 5999999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEc--cC
Q 002801 668 FSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI--GH 745 (879)
Q Consensus 668 ~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~--~h 745 (879)
|+|.|.++|++||-||.|+||++...+.+.-...+.-|++|+|.|+ |.+.++|+.+|.+++|+....+. ...+. .|
T Consensus 417 FnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~Pd-Gk~avIGt~~G~C~fY~t~~lk~-~~~~~I~~~ 494 (712)
T KOG0283|consen 417 FNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPD-GKGAVIGTFNGYCRFYDTEGLKL-VSDFHIRLH 494 (712)
T ss_pred ecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccC-CceEEEEEeccEEEEEEccCCeE-EEeeeEeec
Confidence 9999999999999999999999998877766667888999999999 99999999999999999998763 22221 11
Q ss_pred ------CCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcE--EEEEEecCCCEEEEEeCCC
Q 002801 746 ------NKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK--NFVGLSVWDGYVATGSETN 815 (879)
Q Consensus 746 ------~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v--~~v~~sp~~~~lasgs~Dg 815 (879)
.+.|+.+.|. +...++..+.|..|||+|.+.. ..+..|+|+.+.- ....|+.||++|++||+|.
T Consensus 495 ~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~------~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs 568 (712)
T KOG0283|consen 495 NKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDK------DLVHKFKGFRNTSSQISASFSSDGKHIVSASEDS 568 (712)
T ss_pred cCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccch------hhhhhhcccccCCcceeeeEccCCCEEEEeecCc
Confidence 1279999997 5556888889999999999775 6788888776533 4567999999999999999
Q ss_pred cEEEEecC
Q 002801 816 EVFVYHKA 823 (879)
Q Consensus 816 ~v~vw~~~ 823 (879)
.|+||+..
T Consensus 569 ~VYiW~~~ 576 (712)
T KOG0283|consen 569 WVYIWKND 576 (712)
T ss_pred eEEEEeCC
Confidence 99999974
No 193
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.96 E-value=5.5e-28 Score=252.04 Aligned_cols=261 Identities=20% Similarity=0.279 Sum_probs=218.7
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe----------EEEEeccCCCcEEEEEEecCCCCEEEEEeCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ----------VLTEMREHERRVWSIDFSSADPTLLASGSDDG 683 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~----------~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg 683 (879)
+.|.+.|+.+.+.|.+..+||+.+..+.|.|||..+.. +-..+.+|++.-.+++|++...-.+++|++|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 45889999999999999999999999999999986432 12267789988899999998888999999999
Q ss_pred cEEEEeCCCCce-------EEEEe-cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCC-CceeeEEEccCCCCEEEEEE
Q 002801 684 SVKLWSINQGVS-------IGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRN-SKIPLCTLIGHNKTVSYVKF 754 (879)
Q Consensus 684 ~V~iwd~~~~~~-------i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~-~~~~~~~~~~h~~~V~~v~f 754 (879)
+|.+||+..... ...+. +.+.|..|+|+|....+|++++.|+.+.|||+|+ ..++.....+|...|.|+.|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 999999975432 22333 4566999999999899999999999999999996 33457788899999999999
Q ss_pred c--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecCCCCCceec
Q 002801 755 V--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPMPALSF 831 (879)
Q Consensus 755 s--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~~~~~~~~~ 831 (879)
+ ++..|||||.|++|.|||+++. ..+++++.+|...|..|.|||+.. .||++|.|+.+.|||+..-....+.
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL-----~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~ 355 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNL-----NKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSP 355 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhc-----ccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccCh
Confidence 8 8999999999999999999998 478999999999999999999854 8999999999999999764443332
Q ss_pred ccCCCCCCCCCCC-CCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 832 NFNHADPLSGPET-DDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 832 ~~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
......+...... .+|...|+.+.|+|..+++|+++..|+.+.||++.
T Consensus 356 eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 356 EDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred hhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 3222222211111 78999999999999999999999999999999873
No 194
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.96 E-value=1.7e-29 Score=278.42 Aligned_cols=205 Identities=15% Similarity=0.189 Sum_probs=158.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+. .....|+||||+.||+|.+++.+....+++..++.++.||+.||+|||++||+||||||+
T Consensus 55 l~~~~~~~i~~l~~-~~~--~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~ 131 (331)
T cd05624 55 LVNGDCQWITTLHY-AFQ--DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPD 131 (331)
T ss_pred HHhCCCCCEeeEEE-EEE--cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchH
Confidence 34456777766655 333 244689999999999999999765567899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++........
T Consensus 132 Nill~~~~~~kl~DfG~a~~~~~~~~~----------------------------------------------------- 158 (331)
T cd05624 132 NVLLDMNGHIRLADFGSCLKMNQDGTV----------------------------------------------------- 158 (331)
T ss_pred HEEEcCCCCEEEEeccceeeccCCCce-----------------------------------------------------
Confidence 999999999999999998653211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHHHhh
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~ell 266 (879)
.....+||+.|+|||++.+ ..++.++|||||||+||||+
T Consensus 159 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell 202 (331)
T cd05624 159 ------------------------------------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 202 (331)
T ss_pred ------------------------------------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhh
Confidence 0012478999999999875 45889999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc---CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCC
Q 002801 267 C---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~ 328 (879)
+ ||................ .+|+.....++.+.+++.+||..++.+ |++++++++||||...
T Consensus 203 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 203 YGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred hCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 9 886554433333333222 233444456788999999999876654 4789999999999864
No 195
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.96 E-value=2.5e-27 Score=234.33 Aligned_cols=268 Identities=16% Similarity=0.233 Sum_probs=225.2
Q ss_pred CCceecccccCceEEEeec-CcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccce
Q 002801 533 RSGWINPFLEGLCKYLSFS-KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (879)
Q Consensus 533 ~~~~~~~~~d~~i~~w~~~-~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~ 611 (879)
+.-+++|..|..|-+|+.. ..+-... +.+|+++|..+.|.+|+..++++|.|++|+.||++++.....
T Consensus 59 gs~~aSgG~Dr~I~LWnv~gdceN~~~-----lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk------ 127 (338)
T KOG0265|consen 59 GSCFASGGSDRAIVLWNVYGDCENFWV-----LKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRK------ 127 (338)
T ss_pred CCeEeecCCcceEEEEeccccccceee-----eccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeeh------
Confidence 3445999999999999843 3333333 349999999999999999999999999999999998543211
Q ss_pred EEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 002801 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (879)
Q Consensus 612 ~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~ 691 (879)
...|..-++.+.-+.....++.|++.||+++|||+++..+++.+. .+..++++.|.. ++..+.+|+-|+.|++||++
T Consensus 128 -~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d-~s~qv~sggIdn~ikvWd~r 204 (338)
T KOG0265|consen 128 -HKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKD-TSDQVISGGIDNDIKVWDLR 204 (338)
T ss_pred -hccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecc-cccceeeccccCceeeeccc
Confidence 123666777777555556789999999999999999888887773 466899999998 88999999999999999999
Q ss_pred CCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCC---ceeeEEEccCCC----CEEEEEEc-CCCEEEE
Q 002801 692 QGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS---KIPLCTLIGHNK----TVSYVKFV-DATTLVS 762 (879)
Q Consensus 692 ~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~---~~~~~~~~~h~~----~V~~v~fs-~~~~l~s 762 (879)
......++..+ ..|+.+..+|+ +.++.+-+.|.++++||+|.. ..++..+.+|.. ......|+ ++..+-.
T Consensus 205 ~~d~~~~lsGh~DtIt~lsls~~-gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~a 283 (338)
T KOG0265|consen 205 KNDGLYTLSGHADTITGLSLSRY-GSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITA 283 (338)
T ss_pred cCcceEEeecccCceeeEEeccC-CCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCcccc
Confidence 99999888864 56999999999 889999999999999999864 234778887643 34566777 8889999
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
|+.|..+++||.... ..+..+.||...|++++|+|...+|.+|+.|.+|++=.
T Consensus 284 gs~dr~vyvwd~~~r------~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 284 GSADRFVYVWDTTSR------RILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred ccccceEEEeecccc------cEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 999999999999886 78899999999999999999999999999999998744
No 196
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96 E-value=2.5e-29 Score=266.75 Aligned_cols=202 Identities=16% Similarity=0.206 Sum_probs=158.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+....|++++..++ .+. .....+|++|||+++++|.++++.. ...+++.+++.++.||+.||+|||+.||+|+|||
T Consensus 52 ~l~~l~~~~i~~~~~-~~~-~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~ 129 (257)
T cd08223 52 LLSQLKHPNIVAYRE-SWE-GEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLK 129 (257)
T ss_pred HHHhCCCCCeeeeee-eec-CCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 445556777776555 222 1233578999999999999999653 3468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||+++.......
T Consensus 130 p~nil~~~~~~~~l~df~~~~~~~~~~~---------------------------------------------------- 157 (257)
T cd08223 130 TQNVFLTRTNIIKVGDLGIARVLENQCD---------------------------------------------------- 157 (257)
T ss_pred chhEEEecCCcEEEecccceEEecccCC----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 158 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~ 199 (257)
T cd08223 158 --------------------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLK 199 (257)
T ss_pred --------------------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCC
Confidence 0012367889999999998889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||...... .....+.....++.....++.+.+++.+||..+|.+||++.++++||||
T Consensus 200 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 200 HAFNAKDMN-SLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred CCCCCCCHH-HHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 66544332 2223333344444445567889999999999999999999999999997
No 197
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=1.4e-29 Score=279.27 Aligned_cols=202 Identities=17% Similarity=0.165 Sum_probs=154.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc-CcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~-givHrDlK 109 (879)
.+...+|++++..++ ++.+ ...+|++|||+.|++|.++++.. +.+++..+..++.||+.||.|||++ +|+|||||
T Consensus 56 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlk 131 (333)
T cd06650 56 VLHECNSPYIVGFYG-AFYS--DGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 131 (333)
T ss_pred HHHHCCCCcccceeE-EEEE--CCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence 345567888888776 5543 34689999999999999999654 4689999999999999999999985 79999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+||+|||++......
T Consensus 132 p~Nili~~~~~~kL~Dfg~~~~~~~~------------------------------------------------------ 157 (333)
T cd06650 132 PSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------------ 157 (333)
T ss_pred hhhEEEcCCCCEEEeeCCcchhhhhh------------------------------------------------------
Confidence 99999999999999999998543110
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......||..|+|||++.+..++.++|||||||++|||++
T Consensus 158 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~ 199 (333)
T cd06650 158 --------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199 (333)
T ss_pred --------------------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 0011367999999999998889999999999999999998
Q ss_pred -CCCCChhhHhHHh-------------------------------------------hhcccCCCchh-hccChhhHHHH
Q 002801 268 -PFSTGEEKTRTMS-------------------------------------------SLRHRVLPPQL-LLKFPKEASFC 302 (879)
Q Consensus 268 -pf~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~-~~~~~~~~~li 302 (879)
||........... .+.....+... ...++++.+|+
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 279 (333)
T cd06650 200 YPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFV 279 (333)
T ss_pred CCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHH
Confidence 7754322111000 00000000000 11345678999
Q ss_pred HHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 303 LWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 303 ~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
.+||++||++|||+.|+++||||+..
T Consensus 280 ~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 280 NKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred HHhccCCcccCcCHHHHhhCHHHhcC
Confidence 99999999999999999999999753
No 198
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.96 E-value=1.6e-29 Score=280.44 Aligned_cols=207 Identities=15% Similarity=0.206 Sum_probs=154.5
Q ss_pred CceeecccccccCCCCCCcccccc----cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
+...+...+|++++..++ ++.+. .....|++|+++ |++|.++++. ..+++.+++.|+.||+.||.|||++||
T Consensus 64 E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i 139 (343)
T cd07878 64 ELRLLKHMKHENVIGLLD-VFTPATSIENFNEVYLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAGI 139 (343)
T ss_pred HHHHHHhcCCCchhhhhh-hhcccccccccCcEEEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 344455667888877665 33321 223468899987 8899998854 458999999999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+||||||+|||++.++.+||+|||+++.....
T Consensus 140 vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 171 (343)
T cd07878 140 IHRDLKPSNVAVNEDCELRILDFGLARQADDE------------------------------------------------ 171 (343)
T ss_pred ecccCChhhEEECCCCCEEEcCCccceecCCC------------------------------------------------
Confidence 99999999999999999999999998653110
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil 262 (879)
.+...||++|+|||++.+ ..++.++|||||||+|
T Consensus 172 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 206 (343)
T cd07878 172 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 206 (343)
T ss_pred ---------------------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHH
Confidence 022478999999999977 4589999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhc--cc----------------------CCC-----chhhccChhhHHHHHHhcCCCC
Q 002801 263 FELFC---PFSTGEEKTRTMSSLR--HR----------------------VLP-----PQLLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~--~~----------------------~~~-----~~~~~~~~~~~~li~~~L~~dP 310 (879)
|||++ ||.............. .. ..+ ..+....+.+.+|+.+||..||
T Consensus 207 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp 286 (343)
T cd07878 207 AELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDS 286 (343)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCCh
Confidence 99999 6644322111111000 00 000 0112234567899999999999
Q ss_pred CCCCCHHHHhhcccccCCcCc
Q 002801 311 SGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 311 ~~Rpt~~evl~hp~~~~~~~~ 331 (879)
.+|||+.|+++||||.....+
T Consensus 287 ~~R~s~~ell~hp~~~~~~~~ 307 (343)
T cd07878 287 DKRISASEALAHPYFSQYHDP 307 (343)
T ss_pred hhCCCHHHHhcCcchhccCCC
Confidence 999999999999999875543
No 199
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.96 E-value=9.7e-28 Score=250.23 Aligned_cols=259 Identities=24% Similarity=0.332 Sum_probs=217.8
Q ss_pred cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCc---ccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCC
Q 002801 565 LNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENR---DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (879)
Q Consensus 565 ~~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~---~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg 640 (879)
+.|.+.|+.+.+.| +..++||++..+.|.|||......... .....+...+|...-..|+|++.....|++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 47899999999999 556788889999999999976322221 11223345567777888999999899999999999
Q ss_pred cEEEEEcCCCe-------EEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCC--CceEEEEe-cCCceEEEEe
Q 002801 641 VVQVWDVSRSQ-------VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ--GVSIGTIK-TKANVCCVQF 710 (879)
Q Consensus 641 ~V~vwd~~~~~-------~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~--~~~i~~~~-~~~~v~~v~~ 710 (879)
+|++||++... +...+.+|+..|..++|++.+..+|+++++|+.+.|||+|+ .++..... +.+.|+|++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 99999996432 35567899999999999998899999999999999999995 44444444 4677999999
Q ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCccc--------
Q 002801 711 PLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSR-------- 780 (879)
Q Consensus 711 ~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~-------- 780 (879)
+|.++.+||+||.|++|++||+|+...++.++.+|...|..|.|+ ....|+|++.|+.+.+||+..-...
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~d 360 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAED 360 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhcc
Confidence 999999999999999999999999999999999999999999998 7789999999999999999874321
Q ss_pred ccCCceEEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecC
Q 002801 781 VIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKA 823 (879)
Q Consensus 781 ~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~ 823 (879)
.....+..-.||+..|+.+.|+|+.. .|++.++|+.+.||...
T Consensus 361 gppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 361 GPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 12345677789999999999999987 77889999999999876
No 200
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.96 E-value=6.1e-29 Score=263.52 Aligned_cols=201 Identities=18% Similarity=0.203 Sum_probs=161.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+.+ ...+|++|||+.|++|.+++... ...+++..++.++.||+.||.|||+.||+|+|||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~ 128 (256)
T cd08529 52 VLAKLDSSYIIRYYE-SFLD--KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIK 128 (256)
T ss_pred HHHhcCCCCeehhee-eecc--CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 455678888888777 4433 34689999999999999999553 4578999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||+++.......
T Consensus 129 ~~nili~~~~~~~l~df~~~~~~~~~~~---------------------------------------------------- 156 (256)
T cd08529 129 SLNLFLDAYDNVKIGDLGVAKLLSDNTN---------------------------------------------------- 156 (256)
T ss_pred cceEEEeCCCCEEEcccccceeccCccc----------------------------------------------------
Confidence 9999999999999999999865421100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+++|+|||++.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 198 (256)
T cd08529 157 --------------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGK 198 (256)
T ss_pred --------------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCC
Confidence 0012367889999999999889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||....... ..........++......+.+.+++.+||+.+|++||++.++++|||+
T Consensus 199 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 199 HPFDANNQGA-LILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred CCCCCCCHHH-HHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 776554333 233333344444444566789999999999999999999999999996
No 201
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.5e-27 Score=227.77 Aligned_cols=241 Identities=19% Similarity=0.300 Sum_probs=213.5
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV 694 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~ 694 (879)
.+.++|..+.||- ++++.++++.|.+|++|+.-.+.+++++.+|...|..++.+. |...|++|+.|..|.+||+++|+
T Consensus 15 ~~qgaV~avryN~-dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~vwDV~TGk 92 (307)
T KOG0316|consen 15 CAQGAVRAVRYNV-DGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQVWDVNTGK 92 (307)
T ss_pred ccccceEEEEEcc-CCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccc-cccccccCCCCceEEEEEcccCe
Confidence 4678999999998 599999999999999999999999999999999999999998 88999999999999999999999
Q ss_pred eEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc-eeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEE
Q 002801 695 SIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-IPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLW 772 (879)
Q Consensus 695 ~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~-~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lw 772 (879)
.++.+..| +.|+.|+|+-+ ...+++|+.|.++++||.|+.. .|+..+......|.+|..+ +..|++||.||+++.|
T Consensus 93 v~Rr~rgH~aqVNtV~fNee-sSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~-~heIvaGS~DGtvRty 170 (307)
T KOG0316|consen 93 VDRRFRGHLAQVNTVRFNEE-SSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA-EHEIVAGSVDGTVRTY 170 (307)
T ss_pred eeeecccccceeeEEEecCc-ceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec-ccEEEeeccCCcEEEE
Confidence 99999864 66999999998 7899999999999999999764 5788888888899999885 7789999999999999
Q ss_pred ecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEE
Q 002801 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFIS 852 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 852 (879)
|++.+ .....+-+ .+|+++.|+++++....++.|+++++.|..+++.+.+++- +.+ ..+=.
T Consensus 171 diR~G------~l~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkG-hkn----------~eykl 231 (307)
T KOG0316|consen 171 DIRKG------TLSSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKG-HKN----------MEYKL 231 (307)
T ss_pred Eeecc------eeehhhcC--CcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcc-ccc----------ceeee
Confidence 99998 33333434 4799999999999999999999999999999999988862 221 34556
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 853 SVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 853 ~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
..|++.... .+++|+.||.+.+|+|+
T Consensus 232 dc~l~qsdt-hV~sgSEDG~Vy~wdLv 257 (307)
T KOG0316|consen 232 DCCLNQSDT-HVFSGSEDGKVYFWDLV 257 (307)
T ss_pred eeeecccce-eEEeccCCceEEEEEec
Confidence 777877777 89999999999999986
No 202
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=1.1e-29 Score=276.75 Aligned_cols=208 Identities=20% Similarity=0.181 Sum_probs=170.4
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
+++..+...+|||++..|. +. +....+|+||||+.||.|+++|.+.+ .+.+.+++.+|.|++.||+|||+++||||
T Consensus 104 rev~imk~l~HPnIvkl~~-v~--~t~~~lylV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~ivHr 179 (596)
T KOG0586|consen 104 REVDIMKSLNHPNIVKLFS-VI--ETEATLYLVMEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKNIVHR 179 (596)
T ss_pred HHHHHHHhcCCcceeeeee-ee--eecceeEEEEEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcceecc
Confidence 4444556678999988888 33 35567899999999999999997764 56779999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
|||.+||||+.+..+||+|||++..+....
T Consensus 180 dLk~eNilL~~~mnikIaDfgfS~~~~~~~-------------------------------------------------- 209 (596)
T KOG0586|consen 180 DLKAENILLDENMNIKIADFGFSTFFDYGL-------------------------------------------------- 209 (596)
T ss_pred ccchhhcccccccceeeeccccceeecccc--------------------------------------------------
Confidence 999999999999999999999987653110
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCC-CccCcchhHHHHHHHh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFEL 265 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvil~el 265 (879)
.....+|++.|+|||++.|..| ++.+|+|||||+||-|
T Consensus 210 -----------------------------------------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~L 248 (596)
T KOG0586|consen 210 -----------------------------------------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYAL 248 (596)
T ss_pred -----------------------------------------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheee
Confidence 0123599999999999999886 7899999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
++ ||....-....-..++....-|.+ .+.++.++|.++|.++|.+|+++++++.|.|++.....
T Consensus 249 V~GsLPFDG~~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 249 VEGSLPFDGQNLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred eecccccCCcccccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 99 997665544444445544444443 44778999999999999999999999999999865443
No 203
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.96 E-value=3.8e-29 Score=266.88 Aligned_cols=206 Identities=17% Similarity=0.149 Sum_probs=157.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.++.....|++|||+.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||
T Consensus 57 ~l~~l~h~~i~~~~~-~~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p 134 (266)
T cd06651 57 LLKNLQHERIVQYYG-CLRDRAEKTLTIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKG 134 (266)
T ss_pred HHHHcCCCCeeeEEE-EEEcCCCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCH
Confidence 455567888877665 44444455689999999999999999654 4589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++.........
T Consensus 135 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~--------------------------------------------------- 163 (266)
T cd06651 135 ANILRDSAGNVKLGDFGASKRLQTICMSG--------------------------------------------------- 163 (266)
T ss_pred HHEEECCCCCEEEccCCCccccccccccC---------------------------------------------------
Confidence 99999999999999999986532110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~ 207 (266)
T cd06651 164 ------------------------------------TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKP 207 (266)
T ss_pred ------------------------------------CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCC
Confidence 00012357889999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
||..................+.......+.+.+++ +||..+|++||+++|+++||||+
T Consensus 208 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 208 PWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred CccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 77554333333322222222322334456677887 67788999999999999999996
No 204
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.96 E-value=8.7e-29 Score=267.99 Aligned_cols=208 Identities=15% Similarity=0.170 Sum_probs=158.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.. ....|++|||++|++|..++.+....+++..++.++.||+.||.|||++||+||||||
T Consensus 62 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp 138 (292)
T cd06644 62 ILATCNHPYIVKLLG-AFYW--DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKA 138 (292)
T ss_pred HHHhCCCCcEeeeEE-EEEe--CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCc
Confidence 345667888877666 4433 3468999999999999998865556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||++........
T Consensus 139 ~Nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------------- 165 (292)
T cd06644 139 GNVLLTLDGDIKLADFGVSAKNVKTLQ----------------------------------------------------- 165 (292)
T ss_pred ceEEEcCCCCEEEccCccceecccccc-----------------------------------------------------
Confidence 999999999999999998754211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil~el 265 (879)
......|++.|+|||.+. ...++.++|||||||++|||
T Consensus 166 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el 208 (292)
T cd06644 166 -------------------------------------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208 (292)
T ss_pred -------------------------------------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHH
Confidence 011236788999999985 34478899999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCch
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~ 332 (879)
++ ||....... ....+.....+ +.....+..+.+++.+||..+|++||++.++++||||.......
T Consensus 209 ~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~ 279 (292)
T cd06644 209 AQIEPPHHELNPMR-VLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNR 279 (292)
T ss_pred hcCCCCCccccHHH-HHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccch
Confidence 99 664433222 22222222221 12234557789999999999999999999999999998765544
No 205
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-29 Score=256.19 Aligned_cols=188 Identities=19% Similarity=0.256 Sum_probs=158.4
Q ss_pred ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCC
Q 002801 53 AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (879)
Q Consensus 53 ~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~ 132 (879)
-..+|+||||+.||+|--.|++- +++-++.+..++.+|+-||-|||++|||.||||.+||||+..|++||+|||+|+.-
T Consensus 422 mDRLyFVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred hhheeeEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccc
Confidence 34689999999999999998665 57899999999999999999999999999999999999999999999999999762
Q ss_pred CCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccc
Q 002801 133 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 212 (879)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (879)
-.+ +
T Consensus 501 i~~----~------------------------------------------------------------------------ 504 (683)
T KOG0696|consen 501 IFD----G------------------------------------------------------------------------ 504 (683)
T ss_pred ccC----C------------------------------------------------------------------------
Confidence 111 0
Q ss_pred cchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCc
Q 002801 213 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289 (879)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~ 289 (879)
.....++|||-|+|||++.-.+|+.++|+||+||+|||||. ||.+..+......+..+....|
T Consensus 505 --------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP 570 (683)
T KOG0696|consen 505 --------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP 570 (683)
T ss_pred --------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc
Confidence 01235799999999999999999999999999999999999 8877766666666666665544
Q ss_pred hhhccChhhHHHHHHhcCCCCCCCCCH-----HHHhhcccccCCcCchH
Q 002801 290 QLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEPRDSME 333 (879)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~evl~hp~~~~~~~~~~ 333 (879)
. ..+.++.+++..+|.+.|.+|..+ .+|..||||+.+.....
T Consensus 571 K--slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~ 617 (683)
T KOG0696|consen 571 K--SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKL 617 (683)
T ss_pred c--cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHH
Confidence 4 445788899999999999999653 67999999997765433
No 206
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=3.1e-29 Score=270.25 Aligned_cols=201 Identities=16% Similarity=0.196 Sum_probs=152.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||+. ++|.+++......+++..++.++.||++||.|||++||+||||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~ 127 (284)
T cd07839 52 LLKELKHKNIVRLYD-VLHS--DKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKP 127 (284)
T ss_pred HHHhcCCCCeeeHHH-Hhcc--CCceEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence 344557788777666 4433 346899999996 588888865556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||+++..+....
T Consensus 128 ~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 154 (284)
T cd07839 128 QNLLINKNGELKLADFGLARAFGIPVR----------------------------------------------------- 154 (284)
T ss_pred HHEEEcCCCcEEECccchhhccCCCCC-----------------------------------------------------
Confidence 999999999999999999865321100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+.. ++.++|||||||++|||++
T Consensus 155 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~ 197 (284)
T cd07839 155 -------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 197 (284)
T ss_pred -------------------------------------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcC
Confidence 001135688999999987754 7999999999999999998
Q ss_pred -CCCCChhhHhHHhhhcc-------------------cCCC---------chhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 -PFSTGEEKTRTMSSLRH-------------------RVLP---------PQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~-------------------~~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||+...........+.. ...+ +.....++.+.+|+.+||..||.+|||+++
T Consensus 198 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ 277 (284)
T cd07839 198 RPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEE 277 (284)
T ss_pred CCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHH
Confidence 76554433222211110 0000 111234567889999999999999999999
Q ss_pred Hhhcccc
Q 002801 319 LLQSEFL 325 (879)
Q Consensus 319 vl~hp~~ 325 (879)
++.||||
T Consensus 278 il~h~~f 284 (284)
T cd07839 278 ALQHPYF 284 (284)
T ss_pred HhcCCCC
Confidence 9999997
No 207
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.96 E-value=6.9e-29 Score=267.34 Aligned_cols=205 Identities=13% Similarity=0.130 Sum_probs=158.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||+.+++|..++.+...++++..++.++.||+.||.|||+.||+||||||
T Consensus 55 ~l~~l~h~~ii~~~~-~~~~--~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp 131 (282)
T cd06643 55 ILASCDHPNIVKLLD-AFYY--ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKA 131 (282)
T ss_pred HHHHCCCCCeeeEEE-EEee--CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCc
Confidence 344567888877666 4433 3467999999999999998865556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++........
T Consensus 132 ~nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------------- 158 (282)
T cd06643 132 GNILFTLDGDIKLADFGVSAKNTRTIQ----------------------------------------------------- 158 (282)
T ss_pred ccEEEccCCCEEEcccccccccccccc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil~el 265 (879)
......|+..|+|||++. +..++.++|||||||++|||
T Consensus 159 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el 201 (282)
T cd06643 159 -------------------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201 (282)
T ss_pred -------------------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHH
Confidence 001236788999999984 34578899999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccC-CCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
++ ||................. ..+.....+..+.+||.+||..+|.+||++.++++||||...
T Consensus 202 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 202 AQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred ccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 98 6654443333333222211 112233456789999999999999999999999999999854
No 208
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=1e-29 Score=249.29 Aligned_cols=197 Identities=17% Similarity=0.227 Sum_probs=158.6
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc-CcccccCCCccee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVRPSCFV 114 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~-givHrDlKP~NIl 114 (879)
+-+-+|..|+ .+. .+.+.+|.||.+ +..+..+|++-.+++++..+-++..-++.||.||..+ ||||||+||+|||
T Consensus 149 dcpyIV~c~G-yFi--~n~dV~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNIL 224 (391)
T KOG0983|consen 149 DCPYIVQCFG-YFI--TNTDVFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNIL 224 (391)
T ss_pred CCCeeeeeee-EEe--eCchHHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceE
Confidence 4455555555 222 344678888887 6677778877778899999999999999999999874 8999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
|+..|++|+||||++-.+-..
T Consensus 225 lDe~GniKlCDFGIsGrlvdS----------------------------------------------------------- 245 (391)
T KOG0983|consen 225 LDERGNIKLCDFGISGRLVDS----------------------------------------------------------- 245 (391)
T ss_pred EccCCCEEeecccccceeecc-----------------------------------------------------------
Confidence 999999999999998543111
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC---CCCccCcchhHHHHHHHhhc---C
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvil~ell~---p 268 (879)
+..+...|-+.|||||.+.-. .|+.++||||||+.|+||.| |
T Consensus 246 --------------------------------kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yP 293 (391)
T KOG0983|consen 246 --------------------------------KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYP 293 (391)
T ss_pred --------------------------------cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCC
Confidence 022345788999999998643 49999999999999999999 9
Q ss_pred CCCChhhHhHHhhhcccCCCchh---hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
|.........+..+..... |.+ ...++.+.+|+..||.+|+.+||...++|+|||+...
T Consensus 294 y~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 294 YKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred CCCCCccHHHHHHHHhcCC-CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 9887777777777666433 332 2367899999999999999999999999999999754
No 209
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=5.5e-29 Score=267.56 Aligned_cols=199 Identities=18% Similarity=0.156 Sum_probs=152.3
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..+. .+.. ....|+||||+.|++|.+++... ..+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 54 ~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil 129 (279)
T cd05633 54 GDCPFIVCMTY-AFHT--PDKLCFILDLMNGGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANIL 129 (279)
T ss_pred CCCCcEeEEEE-EEec--CCeEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEE
Confidence 46677765544 3322 34679999999999999998654 46899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.++++|||++......
T Consensus 130 ~~~~~~~~l~dfg~~~~~~~~----------------------------------------------------------- 150 (279)
T cd05633 130 LDEHGHVRISDLGLACDFSKK----------------------------------------------------------- 150 (279)
T ss_pred ECCCCCEEEccCCcceecccc-----------------------------------------------------------
Confidence 999999999999998543110
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc---CCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......||..|+|||.+.+ ..++.++|||||||+||||++ ||.
T Consensus 151 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 197 (279)
T cd05633 151 ---------------------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFR 197 (279)
T ss_pred ---------------------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcC
Confidence 0011367899999999864 558999999999999999999 775
Q ss_pred CChhhH-hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 271 TGEEKT-RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
...... ..............+...++.+.++|.+||..||++|| ++.++++||||+...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 198 QHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 332111 11111111111122234567889999999999999999 699999999998754
No 210
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.96 E-value=3.8e-29 Score=269.70 Aligned_cols=204 Identities=16% Similarity=0.170 Sum_probs=156.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+.+ ....|++|||+.|++|.+++.. ....+++.+++.++.|++.||.|||++||+|||||
T Consensus 53 il~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dik 129 (285)
T cd05630 53 ILEKVNSRFVVSLAY-AYET--KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLK 129 (285)
T ss_pred HHHhCCCCCeeeeeE-EEec--CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCC
Confidence 445567777776655 3333 3468999999999999998843 33468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++.......
T Consensus 130 p~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------------------------------------------- 156 (285)
T cd05630 130 PENILLDDHGHIRISDLGLAVHVPEGQ----------------------------------------------------- 156 (285)
T ss_pred HHHEEECCCCCEEEeeccceeecCCCc-----------------------------------------------------
Confidence 999999999999999999885421100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+||..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 198 (285)
T cd05630 157 --------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 198 (285)
T ss_pred --------------------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCC
Confidence 0012368999999999999889999999999999999999
Q ss_pred -CCCCChhhH--hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCC
Q 002801 268 -PFSTGEEKT--RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (879)
Q Consensus 268 -pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~ 328 (879)
||....... ..................++.+.+|+.+||+.||.+||| +.|+++||||...
T Consensus 199 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 199 SPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred CCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 775432211 111111111111222345677899999999999999999 8999999999864
No 211
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.96 E-value=7.2e-26 Score=258.99 Aligned_cols=321 Identities=16% Similarity=0.190 Sum_probs=216.2
Q ss_pred EeecCcEEEEEeccccccCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEe
Q 002801 548 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626 (879)
Q Consensus 548 w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg-~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 626 (879)
|+.. +..++. +..|+..|..++.+++. .+|+||+.||+||+|+.....................+.+.++...
T Consensus 1034 W~p~-G~lVAh-----L~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~ 1107 (1431)
T KOG1240|consen 1034 WNPR-GILVAH-----LHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMC 1107 (1431)
T ss_pred CCcc-ceEeeh-----hhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEec
Confidence 6543 444444 45788888899998754 9999999999999999987544322222222333367788999888
Q ss_pred CCCCCeEEEeeCCCcEEEEEcCCCe-------EEEEeccC--CCcEEEEEEecCCCC-EEEEEeCCCcEEEEeCCCCceE
Q 002801 627 SYIKSQIASSNFEGVVQVWDVSRSQ-------VLTEMREH--ERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 627 ~~~~~~l~s~~~dg~V~vwd~~~~~-------~~~~~~~h--~~~v~sv~~sp~~~~-~lasgs~Dg~V~iwd~~~~~~i 696 (879)
+. ++.+|.++.||.|.+.+++... +....+.+ ..-|..-+|...... .++.+..-+.|..||+++...+
T Consensus 1108 ~~-~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~ 1186 (1431)
T KOG1240|consen 1108 GN-GDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDA 1186 (1431)
T ss_pred cC-CCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhH
Confidence 74 8899999999999999987521 12222222 233444455544555 7888888899999999998887
Q ss_pred EEEec---CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEc-cCCCCEEEEEEc--CC--CEEEEEE--cC
Q 002801 697 GTIKT---KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI-GHNKTVSYVKFV--DA--TTLVSAS--TD 766 (879)
Q Consensus 697 ~~~~~---~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~-~h~~~V~~v~fs--~~--~~l~s~s--~D 766 (879)
.+++. ++-|++++.+|. +++++.|+..|.+.+||+|=.. ++.... .+..++..+..+ .+ ...++++ ..
T Consensus 1187 w~lk~~~~hG~vTSi~idp~-~~WlviGts~G~l~lWDLRF~~-~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~ 1264 (1431)
T KOG1240|consen 1187 WRLKNQLRHGLVTSIVIDPW-CNWLVIGTSRGQLVLWDLRFRV-PILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSN 1264 (1431)
T ss_pred HhhhcCccccceeEEEecCC-ceEEEEecCCceEEEEEeecCc-eeecccCcccCCcceEEeeccCCCCceEEEecccCC
Confidence 77764 677999999999 8899999999999999999766 355443 556777777665 33 4555544 46
Q ss_pred CcEEEEecCCCcccc---c--CCceEEE-e-------CCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCce-ecc
Q 002801 767 NTLKLWDLSMCTSRV---I--DTPLHSF-T-------GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPAL-SFN 832 (879)
Q Consensus 767 ~~i~lwd~~~~~~~~---~--~~~~~~~-~-------~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~-~~~ 832 (879)
+.|.+|++.++..+. . ..+..+. . .+.-.....++...+.++.+|+.|..|+.||...++... .+.
T Consensus 1265 nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~ 1344 (1431)
T KOG1240|consen 1265 NEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVP 1344 (1431)
T ss_pred CceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCccccccccc
Confidence 889999999874320 0 0010000 0 122233344555556799999999999999987665440 000
Q ss_pred cC----------------CCC------------------------CCCCCC--CCCCCCCEEEEEEeCCCCcEEEEEeCC
Q 002801 833 FN----------------HAD------------------------PLSGPE--TDDAAQFISSVCWRGQSSNTLVAANSS 870 (879)
Q Consensus 833 ~~----------------~~~------------------------~~~~~~--~~~h~~~V~~v~~~p~~~~~l~s~~~D 870 (879)
-+ +.. ...+.. ...|..+|+++++-.....+|++++.|
T Consensus 1345 ~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~d 1424 (1431)
T KOG1240|consen 1345 GPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRD 1424 (1431)
T ss_pred CccccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCC
Confidence 00 000 000111 145788999998875544389999999
Q ss_pred CcEEEEE
Q 002801 871 GNIKILE 877 (879)
Q Consensus 871 g~I~vw~ 877 (879)
|.|+||.
T Consensus 1425 G~IkiWk 1431 (1431)
T KOG1240|consen 1425 GVIKIWK 1431 (1431)
T ss_pred CeeeecC
Confidence 9999994
No 212
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=1.7e-29 Score=251.80 Aligned_cols=208 Identities=18% Similarity=0.204 Sum_probs=151.2
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc----CCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~----~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
-..|+|++.... +.-.. ...++++.||.+ -+|.+.|+ ...+.++...++.|+.||+.||.|||+.=|+|||||
T Consensus 83 El~h~nvi~Lv~-Vfl~~-d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLK 159 (438)
T KOG0666|consen 83 ELKHPNVISLVK-VFLSH-DKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLK 159 (438)
T ss_pred HhcCCcchhHHH-HHhcc-CceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCC
Confidence 345555554433 33322 456899999995 48888883 223578999999999999999999999999999999
Q ss_pred CcceeeccC----CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 110 PSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 110 P~NIll~~~----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|+|||+..+ |.|||+|+|+++.+..+-.. +
T Consensus 160 PaNIlvmgdgperG~VKIaDlGlaR~~~~plkp--l-------------------------------------------- 193 (438)
T KOG0666|consen 160 PANILVMGDGPERGRVKIADLGLARLFNNPLKP--L-------------------------------------------- 193 (438)
T ss_pred cceEEEeccCCccCeeEeecccHHHHhhccccc--c--------------------------------------------
Confidence 999999876 89999999999986433100 0
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~e 264 (879)
. .....+-|.||+|||.+.|.. |+.+.|||++|||+.|
T Consensus 194 ----~-------------------------------------s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaE 232 (438)
T KOG0666|consen 194 ----A-------------------------------------SLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAE 232 (438)
T ss_pred ----c-------------------------------------cCCceEEEEEecChHHhcccccccchhhhHHHHHHHHH
Confidence 0 002247799999999999977 9999999999999999
Q ss_pred hhc--CCCCChhhH-------------hHHhhhcc------------------------cCCCc--------hhhccChh
Q 002801 265 LFC--PFSTGEEKT-------------RTMSSLRH------------------------RVLPP--------QLLLKFPK 297 (879)
Q Consensus 265 ll~--pf~~~~~~~-------------~~~~~~~~------------------------~~~~~--------~~~~~~~~ 297 (879)
|++ |.+.+.+.. +.+..+.. ....+ .....++.
T Consensus 233 lLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~ 312 (438)
T KOG0666|consen 233 LLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPS 312 (438)
T ss_pred HHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCch
Confidence 999 654432211 11111111 00000 01113445
Q ss_pred hHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 298 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 298 ~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
..+|+.+||..||-+|+|++++|+|+||.....+
T Consensus 313 a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 313 ALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 7799999999999999999999999999976444
No 213
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.96 E-value=4.9e-29 Score=266.19 Aligned_cols=200 Identities=17% Similarity=0.209 Sum_probs=154.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+. .....|++|||+++++|.+++... +.+++.+++.++.||+.||+|||++||+|+||||
T Consensus 59 ~~~~l~h~~ii~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp 134 (267)
T cd06645 59 MMKDCKHSNIVAYFG-SYL--RRDKLWICMEFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKG 134 (267)
T ss_pred HHHhCCCCCeeeEEE-EEE--eCCEEEEEEeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 344567888888776 332 234679999999999999998654 4789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 135 ~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 161 (267)
T cd06645 135 ANILLTDNGHVKLADFGVSAQITATIA----------------------------------------------------- 161 (267)
T ss_pred HHEEECCCCCEEECcceeeeEccCccc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell~ 267 (879)
......|+..|+|||.+. ...++.++|||||||++|||++
T Consensus 162 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~ 204 (267)
T cd06645 162 -------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAE 204 (267)
T ss_pred -------------------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhc
Confidence 001246899999999984 4558899999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchh---hccChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
||..................++.. ...+..+.+++.+||..+|++||+++++++|||
T Consensus 205 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 205 LQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 765443332222222222222221 234567889999999999999999999999998
No 214
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.96 E-value=6.1e-29 Score=273.71 Aligned_cols=211 Identities=18% Similarity=0.166 Sum_probs=153.2
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+...+|++++..++ ++.++ ...|+||||+++++|.+++... ...+++..++.++.||+.||+|||++||+||||||
T Consensus 53 l~~l~hpniv~~~~-~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp 129 (327)
T cd08227 53 SKLFNHPNIVPYRA-TFIAD--NELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKA 129 (327)
T ss_pred HHhcCCCCeeeEEE-EEEEC--CEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCh
Confidence 34457888888766 55433 4679999999999999999543 34589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.++++||+.+......... .
T Consensus 130 ~Nil~~~~~~~~l~~~~~~~~~~~~~~~--~------------------------------------------------- 158 (327)
T cd08227 130 SHILISVDGKVYLSGLRSNLSMINHGQR--L------------------------------------------------- 158 (327)
T ss_pred hhEEEecCCcEEEcccchhhcccccccc--c-------------------------------------------------
Confidence 9999999999999999876432110000 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC--CCCCccCcchhHHHHHHHhhc-
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvil~ell~- 267 (879)
+. ...+ .....++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 159 ----------------~~-------------~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g 206 (327)
T cd08227 159 ----------------RV-------------VHDF---PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 206 (327)
T ss_pred ----------------cc-------------cccc---cccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHC
Confidence 00 0000 011256778999999976 458999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCC--------------------------------------------CchhhccChhhHHH
Q 002801 268 --PFSTGEEKTRTMSSLRHRVL--------------------------------------------PPQLLLKFPKEASF 301 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~l 301 (879)
||............+..... .+.....++.+.+|
T Consensus 207 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 286 (327)
T cd08227 207 HVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHF 286 (327)
T ss_pred CCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHH
Confidence 77543322222211111000 00111234678899
Q ss_pred HHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 302 CLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 302 i~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
+.+||+.||++|||++|+++||||+..
T Consensus 287 i~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 287 VEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred HHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 999999999999999999999999764
No 215
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.9e-29 Score=260.27 Aligned_cols=190 Identities=17% Similarity=0.177 Sum_probs=152.3
Q ss_pred ccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecc
Q 002801 49 ENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 127 (879)
Q Consensus 49 ~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg 127 (879)
..+....+++||..|.||+|.-+|-. ...-+++..++.|+.+|+.||++||.++||.|||||+|||||..|+++|.|.|
T Consensus 253 AfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 253 AFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred eecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccc
Confidence 45677789999999999999998844 33469999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeecccccccc
Q 002801 128 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 207 (879)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (879)
+|-.+....
T Consensus 333 LAvei~~g~----------------------------------------------------------------------- 341 (591)
T KOG0986|consen 333 LAVEIPEGK----------------------------------------------------------------------- 341 (591)
T ss_pred eEEecCCCC-----------------------------------------------------------------------
Confidence 997642110
Q ss_pred ccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhH---Hhh
Q 002801 208 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRT---MSS 281 (879)
Q Consensus 208 ~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~---~~~ 281 (879)
.....+||..|||||++..+.|+++.|+|||||+||||+. ||....+.... ...
T Consensus 342 --------------------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr 401 (591)
T KOG0986|consen 342 --------------------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRR 401 (591)
T ss_pred --------------------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHH
Confidence 0123489999999999999999999999999999999998 88544332221 111
Q ss_pred hcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCcC
Q 002801 282 LRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (879)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~~ 330 (879)
+... ........++++++++..+|++||.+|.. +.++.+||||+.+..
T Consensus 402 ~~~~-~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 402 TLED-PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred Hhcc-hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 1111 11122345688999999999999999964 679999999997543
No 216
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.96 E-value=5.6e-29 Score=265.39 Aligned_cols=207 Identities=15% Similarity=0.153 Sum_probs=160.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .|.+. ...|++|||+.|++|.+++.+. .++++..+..++.||+.||+|||+.||+|+||||
T Consensus 55 ~l~~l~~~~i~~~~~-~~~~~--~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p 130 (265)
T cd06631 55 LLKSLKHVNIVQYLG-TCLDD--NTISIFMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKG 130 (265)
T ss_pred HHHhcCCCCEeeEee-EeecC--CeEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCH
Confidence 455667888877666 55443 5689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||+++...........
T Consensus 131 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~------------------------------------------------- 161 (265)
T cd06631 131 NNVMLMPNGIIKLIDFGCARRLAWVGLHGTH------------------------------------------------- 161 (265)
T ss_pred HhEEECCCCeEEeccchhhHhhhhccccccc-------------------------------------------------
Confidence 9999999999999999998653211000000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
........|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 162 -----------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~ 206 (265)
T cd06631 162 -----------------------------------SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKP 206 (265)
T ss_pred -----------------------------------cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCC
Confidence 000012367999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc-cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||............... ...++........+.++|.+||.++|.+||++.++++||||
T Consensus 207 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 207 PLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 77554433333222222 23344444566788999999999999999999999999997
No 217
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=6.3e-29 Score=265.29 Aligned_cols=193 Identities=20% Similarity=0.235 Sum_probs=153.1
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ .+.+ ....|+||||++|++|.++++.. ..+++.+++.++.||+.||.|||+.||+||||||+||++
T Consensus 67 ~h~~iv~~~~-~~~~--~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~ 142 (267)
T PHA03390 67 DNPNFIKLYY-SVTT--LKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY 142 (267)
T ss_pred cCCCEEEEEE-EEec--CCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE
Confidence 6777777666 3333 23689999999999999999665 378999999999999999999999999999999999999
Q ss_pred ccCC-CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 116 SSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 116 ~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
+.++ .++++|||+++.....
T Consensus 143 ~~~~~~~~l~dfg~~~~~~~~----------------------------------------------------------- 163 (267)
T PHA03390 143 DRAKDRIYLCDYGLCKIIGTP----------------------------------------------------------- 163 (267)
T ss_pred eCCCCeEEEecCccceecCCC-----------------------------------------------------------
Confidence 9888 9999999988543111
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
....|+..|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 164 -----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 208 (267)
T PHA03390 164 -----------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKE 208 (267)
T ss_pred -----------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 11256888999999998889999999999999999999 7754
Q ss_pred ChhhHhHHhhhcc--cCCCchhhccChhhHHHHHHhcCCCCCCCCC-HHHHhhccccc
Q 002801 272 GEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLN 326 (879)
Q Consensus 272 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~evl~hp~~~ 326 (879)
..........+.. ....+.+...++.+.+||.+||+++|.+||+ ++++|+||||.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 209 DEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred CCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 3222111111111 1222333457788999999999999999996 69999999996
No 218
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=5.9e-28 Score=264.96 Aligned_cols=287 Identities=22% Similarity=0.352 Sum_probs=231.5
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCC
Q 002801 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (879)
Q Consensus 570 ~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~ 649 (879)
..++|+..++-..++.+|.. .++|+.++.......-.++-.....-...+..|.|+....++||+++..|.|.+||+..
T Consensus 41 ~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk 119 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNK 119 (839)
T ss_pred ccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCc
Confidence 34566777888888888875 88898887532221111110000112235678899988899999999999999999987
Q ss_pred ---CeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCC-ceEEEEeeCCCCCEEEEEeCCC
Q 002801 650 ---SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NVCCVQFPLDSGRSLAFGSADH 725 (879)
Q Consensus 650 ---~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~-~v~~v~~~p~~~~~l~tgs~d~ 725 (879)
.+.+..|.+|+..|++++|++..+++|+|||.||+|++||++..+...++...+ .|..|+|+|..++.|+++...|
T Consensus 120 ~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG 199 (839)
T KOG0269|consen 120 SIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSG 199 (839)
T ss_pred cccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCc
Confidence 566678899999999999999999999999999999999999999888887654 4999999999999999999999
Q ss_pred eEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecC
Q 002801 726 RIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVW 804 (879)
Q Consensus 726 ~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 804 (879)
.+.+||+|.+..+...+.+|.++|.++.|+ ++.+||||+.|+.|+|||+..... .++.++. -..+|..|.|-|.
T Consensus 200 ~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~----~~~~tIn-Tiapv~rVkWRP~ 274 (839)
T KOG0269|consen 200 YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA----KPKHTIN-TIAPVGRVKWRPA 274 (839)
T ss_pred eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCc----cceeEEe-ecceeeeeeeccC
Confidence 999999999998888999999999999999 999999999999999999987532 4555554 3568999999998
Q ss_pred CC-EEEEEeC--CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEE
Q 002801 805 DG-YVATGSE--TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIK 874 (879)
Q Consensus 805 ~~-~lasgs~--Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~ 874 (879)
.. .||+++. |-.|+|||+..+-. .-..+..|...|+.++|.....-.|.+++.||+|.
T Consensus 275 ~~~hLAtcsmv~dtsV~VWDvrRPYI------------P~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~ 335 (839)
T KOG0269|consen 275 RSYHLATCSMVVDTSVHVWDVRRPYI------------PYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVL 335 (839)
T ss_pred ccchhhhhhccccceEEEEeeccccc------------cceeeeccCccccceeccCCCceeeEeecCccHHH
Confidence 76 6787774 78899999986422 11234678899999999863333799999999864
No 219
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.96 E-value=1.3e-26 Score=234.81 Aligned_cols=283 Identities=14% Similarity=0.230 Sum_probs=234.2
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
.+..|++.|++|+.+|+..++||||.|..-.||+..++. .+.....|+..|+|+.|+. ++.+||+|+.+|.|
T Consensus 59 tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge-------~~~eltgHKDSVt~~~Fsh-dgtlLATGdmsG~v 130 (399)
T KOG0296|consen 59 TFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE-------FAGELTGHKDSVTCCSFSH-DGTLLATGDMSGKV 130 (399)
T ss_pred ehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc-------ceeEecCCCCceEEEEEcc-CceEEEecCCCccE
Confidence 345899999999999999999999999999999998642 2344457999999999998 59999999999999
Q ss_pred EEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEE
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFG 721 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tg 721 (879)
.||+..++.....+..--..|.-+.|+| .+..|+.|+.||.|.+|.+.++...+.+.. ..+++|=.|.|+ |+.+++|
T Consensus 131 ~v~~~stg~~~~~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pd-GKr~~tg 208 (399)
T KOG0296|consen 131 LVFKVSTGGEQWKLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPD-GKRILTG 208 (399)
T ss_pred EEEEcccCceEEEeecccCceEEEEecc-cccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCC-CceEEEE
Confidence 9999999988877765556778899999 899999999999999999998766666664 567999999999 9999999
Q ss_pred eCCCeEEEEEcCCCceeeEEEcc-CCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEe--------C
Q 002801 722 SADHRIYYYDLRNSKIPLCTLIG-HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT--------G 791 (879)
Q Consensus 722 s~d~~I~iwDl~~~~~~~~~~~~-h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~--------~ 791 (879)
..||+|++||+.++. |+..+.+ ......++.++ .+..+++|+.++.+++-+..+++ .+.... .
T Consensus 209 y~dgti~~Wn~ktg~-p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgK------Vv~~~n~~~~~l~~~ 281 (399)
T KOG0296|consen 209 YDDGTIIVWNPKTGQ-PLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGK------VVNCNNGTVPELKPS 281 (399)
T ss_pred ecCceEEEEecCCCc-eeEEecccccCcCCccccccccceeEeccCCccEEEEccccce------EEEecCCCCcccccc
Confidence 999999999999998 4666653 33456788888 89999999999999988877763 333333 3
Q ss_pred CCCcEEEEEEecC---CCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEe
Q 002801 792 HTNVKNFVGLSVW---DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAAN 868 (879)
Q Consensus 792 h~~~v~~v~~sp~---~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~ 868 (879)
+...+.+|.+.|. =...|||+-||+|.|||+...++.... .|...|..+.|-+ .. +|+||+
T Consensus 282 ~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c--------------~he~~V~~l~w~~-t~-~l~t~c 345 (399)
T KOG0296|consen 282 QEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC--------------EHEDGVTKLKWLN-TD-YLLTAC 345 (399)
T ss_pred chhhhhhhhhcccccccchhhcccccceEEEEecccchhheec--------------cCCCceEEEEEcC-cc-hheeec
Confidence 5555666665554 458899999999999999876543322 3566799999998 66 899999
Q ss_pred CCCcEEEEEe
Q 002801 869 SSGNIKILEM 878 (879)
Q Consensus 869 ~Dg~I~vw~l 878 (879)
.||.|++||.
T Consensus 346 ~~g~v~~wDa 355 (399)
T KOG0296|consen 346 ANGKVRQWDA 355 (399)
T ss_pred cCceEEeeec
Confidence 9999999984
No 220
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=5.1e-28 Score=244.27 Aligned_cols=281 Identities=17% Similarity=0.257 Sum_probs=233.1
Q ss_pred ccccCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCC
Q 002801 562 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (879)
Q Consensus 562 ~~l~~h~~~V~~l~fspdg-~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg 640 (879)
+.|.||.++|.|++=+|.. ..+|+|+.||.|+|||+..... ......|.+.|..|++.. ..+++++.|.
T Consensus 60 ~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~-------~~~f~AH~G~V~Gi~v~~---~~~~tvgdDK 129 (433)
T KOG0268|consen 60 GSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQREC-------IRTFKAHEGLVRGICVTQ---TSFFTVGDDK 129 (433)
T ss_pred hhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhh-------hheeecccCceeeEEecc---cceEEecCCc
Confidence 4456999999999999976 7899999999999999986322 223345888999999974 6788889999
Q ss_pred cEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCC-ceEEEEeeCCCCCEEE
Q 002801 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NVCCVQFPLDSGRSLA 719 (879)
Q Consensus 641 ~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~-~v~~v~~~p~~~~~l~ 719 (879)
+|+.|.++- .++.++. ....+..++-+. ..+.+|||+.+ |.|||..-..++.++..+. .|.++.|+|.....|+
T Consensus 130 tvK~wk~~~-~p~~til-g~s~~~gIdh~~-~~~~FaTcGe~--i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILa 204 (433)
T KOG0268|consen 130 TVKQWKIDG-PPLHTIL-GKSVYLGIDHHR-KNSVFATCGEQ--IDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILA 204 (433)
T ss_pred ceeeeeccC-Ccceeee-cccccccccccc-ccccccccCce--eeecccccCCccceeecCCCceeEEecCCCcchhee
Confidence 999999874 4555553 345677777776 67899999875 9999999999999998754 4999999999888999
Q ss_pred EEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEE
Q 002801 720 FGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNF 798 (879)
Q Consensus 720 tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~ 798 (879)
+|..|+.|.+||+|+... +.... -...-+.|+|+ ..-.+++|+.|..++.||++.. ..++..+.+|.+.|.+
T Consensus 205 s~~sDrsIvLyD~R~~~P-l~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l-----~~p~~v~~dhvsAV~d 277 (433)
T KOG0268|consen 205 SCASDRSIVLYDLRQASP-LKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNL-----SRPLNVHKDHVSAVMD 277 (433)
T ss_pred eeccCCceEEEecccCCc-cceee-eeccccceecCccccceeeccccccceehhhhhh-----cccchhhcccceeEEE
Confidence 999999999999999884 44432 23445789999 7777889999999999999997 4789999999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 799 VGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 799 v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|+|||.|+-+++||.|.+|+||....+..-..+. ..-.+.|.+|.|+-|+. ++++|+.|++|++|.
T Consensus 278 VdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYh------------tkRMq~V~~Vk~S~Dsk-yi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 278 VDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYH------------TKRMQHVFCVKYSMDSK-YIISGSDDGNVRLWK 343 (433)
T ss_pred eccCCCcchhccccccceEEEeecCCCcchhhhh------------HhhhheeeEEEEecccc-EEEecCCCcceeeee
Confidence 9999999999999999999999988654332221 12246799999999999 999999999999996
No 221
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.2e-29 Score=272.33 Aligned_cols=221 Identities=20% Similarity=0.207 Sum_probs=161.5
Q ss_pred cccccccccCCCCC----cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCC-CCCh
Q 002801 7 RGERFGVRGDDSND----FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKR-SVDV 81 (879)
Q Consensus 7 ~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~-~l~~ 81 (879)
+|..++|+...... ..|..| +..+++.+|+|+|.+++ +|.+... .++||+||+.+|+|.++|..... +++|
T Consensus 98 ~~~~vAVK~~~~~~~~~~~eF~~E--i~~ls~l~H~Nlv~LlG-yC~e~~~-~~~LVYEym~nGsL~d~L~~~~~~~L~W 173 (361)
T KOG1187|consen 98 DGTVVAVKRLSSNSGQGEREFLNE--VEILSRLRHPNLVKLLG-YCLEGGE-HRLLVYEYMPNGSLEDHLHGKKGEPLDW 173 (361)
T ss_pred CCCEEEEEEecCCCCcchhHHHHH--HHHHhcCCCcCcccEEE-EEecCCc-eEEEEEEccCCCCHHHHhCCCCCCCCCH
Confidence 34567776433322 234444 44566777999988877 7775543 68999999999999999966555 8999
Q ss_pred hHHHHHHHHHHHHHHhhhhcC---cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcch
Q 002801 82 YECLHIFRQIVEIVYAAHSQG---IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (879)
Q Consensus 82 ~~~~~i~~qi~~~l~~lHs~g---ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (879)
...++|+.+++.||+|||... ||||||||+|||||.+.++|++|||+|+..... ..
T Consensus 174 ~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~-~~-------------------- 232 (361)
T KOG1187|consen 174 ETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG-DT-------------------- 232 (361)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc-cc--------------------
Confidence 999999999999999999854 999999999999999999999999999653210 00
Q ss_pred hhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccc-ccccc
Q 002801 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILL-METNW 237 (879)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~gt~~ 237 (879)
..... .||..
T Consensus 233 ---------------------------------------------------------------------~~~~~~~gt~g 243 (361)
T KOG1187|consen 233 ---------------------------------------------------------------------SVSTTVMGTFG 243 (361)
T ss_pred ---------------------------------------------------------------------ceeeecCCCCc
Confidence 00112 78999
Q ss_pred eeccccccCCCCCccCcchhHHHHHHHhhc---CCCCCh----h--hHhHHhhhccc----CCCchhh-c------cChh
Q 002801 238 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE----E--KTRTMSSLRHR----VLPPQLL-L------KFPK 297 (879)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~----~--~~~~~~~~~~~----~~~~~~~-~------~~~~ 297 (879)
|+|||.+..+..+.++|||||||+|.||++ +..... . .......+... ...|... . ....
T Consensus 244 Y~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~ 323 (361)
T KOG1187|consen 244 YLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKK 323 (361)
T ss_pred cCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHH
Confidence 999999998889999999999999999999 333211 1 11111122221 1222221 1 2233
Q ss_pred hHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 298 EASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 298 ~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+..+..+|++.+|..||+|.||++
T Consensus 324 ~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 324 LAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHHHHcCcCCCcCcCHHHHHH
Confidence 568889999999999999999754
No 222
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.95 E-value=1.7e-28 Score=264.33 Aligned_cols=199 Identities=15% Similarity=0.142 Sum_probs=150.8
Q ss_pred ccccCCCCCCccccc----ccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 36 DHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~----~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+|++++..++ .+.. +.....|++|||+.+++|.+++... ...+++..++.++.||+.||+|||++||+|+||||
T Consensus 71 ~h~~i~~~~~-~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~ 149 (282)
T cd06636 71 HHRNIATYYG-AFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKG 149 (282)
T ss_pred CCCcEEEEee-ehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 5777776655 3321 2245679999999999999998542 34588899999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||++........
T Consensus 150 ~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 176 (282)
T cd06636 150 QNVLLTENAEVKLVDFGVSAQLDRTVG----------------------------------------------------- 176 (282)
T ss_pred HHEEECCCCCEEEeeCcchhhhhcccc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil~el 265 (879)
......|+..|+|||.+. +..++.++|||||||++|||
T Consensus 177 -------------------------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el 219 (282)
T cd06636 177 -------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEM 219 (282)
T ss_pred -------------------------------------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHH
Confidence 001236788999999986 34588899999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
++ ||.........................++.+.+||.+||..||.+||++.|+++||||
T Consensus 220 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 220 AEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred HhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 99 7754433222222111111111222456788999999999999999999999999997
No 223
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.95 E-value=1e-29 Score=251.65 Aligned_cols=201 Identities=12% Similarity=0.153 Sum_probs=159.1
Q ss_pred cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeec
Q 002801 37 HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 116 (879)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~ 116 (879)
-+-+|..|+.++ ...+++||||||..|++.+.++..+.+|.+.++..|++..+.||+|||...-||||||..||||+
T Consensus 87 S~yVVKYYGSYF---K~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN 163 (502)
T KOG0574|consen 87 SKYVVKYYGSYF---KHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN 163 (502)
T ss_pred Cchhhhhhhhhc---cCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc
Confidence 344455555333 24578999999999999999988878999999999999999999999999999999999999999
Q ss_pred cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcc
Q 002801 117 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 196 (879)
Q Consensus 117 ~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (879)
-+|++|++|||+|-++... +
T Consensus 164 T~G~AKLADFGVAGQLTDT-----M------------------------------------------------------- 183 (502)
T KOG0574|consen 164 TDGIAKLADFGVAGQLTDT-----M------------------------------------------------------- 183 (502)
T ss_pred ccchhhhhhccccchhhhh-----H-------------------------------------------------------
Confidence 9999999999999664211 1
Q ss_pred eeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCCh
Q 002801 197 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE 273 (879)
Q Consensus 197 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~ 273 (879)
.+....+|||.|||||++..-.|++++||||||++..||.. ||....
T Consensus 184 ------------------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH 233 (502)
T KOG0574|consen 184 ------------------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH 233 (502)
T ss_pred ------------------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc
Confidence 02345799999999999999999999999999999999998 553322
Q ss_pred hhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 274 EKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 274 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
..+++..+.....| ..+...+.++.+|+++||.+.|++|-|+-++++|||++.....
T Consensus 234 -PMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 234 -PMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC 292 (502)
T ss_pred -ccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence 22222222222111 1223345678899999999999999999999999999876543
No 224
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.95 E-value=1.1e-28 Score=263.14 Aligned_cols=206 Identities=17% Similarity=0.147 Sum_probs=157.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+.....+|++|||++|++|.+++.+. ..+++..++.++.||+.||.|||++||+|+||||
T Consensus 57 ~l~~l~h~~i~~~~~-~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p 134 (265)
T cd06652 57 LLKNLLHERIVQYYG-CLRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKG 134 (265)
T ss_pred HHHhcCCCCeeeEEe-EeccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCH
Confidence 445567888877666 34444445678999999999999999654 4589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||+++.........
T Consensus 135 ~nil~~~~~~~~l~Dfg~~~~~~~~~~~~--------------------------------------------------- 163 (265)
T cd06652 135 ANILRDSVGNVKLGDFGASKRLQTICLSG--------------------------------------------------- 163 (265)
T ss_pred HHEEecCCCCEEECcCccccccccccccc---------------------------------------------------
Confidence 99999999999999999986532110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 207 (265)
T cd06652 164 ------------------------------------TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKP 207 (265)
T ss_pred ------------------------------------cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCC
Confidence 00012367889999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
||..................+..+......+.+++.+||. +|++||+++++++|||++
T Consensus 208 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 208 PWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred CCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 7754433333333332222233333455678899999995 999999999999999984
No 225
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.95 E-value=1.4e-28 Score=269.60 Aligned_cols=236 Identities=17% Similarity=0.175 Sum_probs=165.6
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
..+.+..|++++..++ .+.+ ....|++|||+.|++|.+++.+. ...+++..++.++.||+.||+|||+.||+|+||
T Consensus 53 ~~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl 129 (316)
T cd05574 53 EILATLDHPFLPTLYA-SFQT--ETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDL 129 (316)
T ss_pred HHHHhCCCCCchhhee-eeec--CCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 3445566888877766 4432 44689999999999999999543 357899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++|+|||++........... ... .. .+. . .
T Consensus 130 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~---~~~-----------------------~~--~~~-------~---~ 171 (316)
T cd05574 130 KPENILLHESGHIMLSDFDLSKQSDVEPPPVS---KAL-----------------------RK--GSR-------R---S 171 (316)
T ss_pred ChHHeEEcCCCCEEEeecchhhcccccccccc---ccc-----------------------cc--ccc-------c---c
Confidence 99999999999999999999876432210000 000 00 000 0 0
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
+........ ... .........+||..|+|||++.+..++.++|||||||++|+|++
T Consensus 172 ~~~~~~~~~--------------------~~~---~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 172 SVNSIPSET--------------------FSE---EPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred cccccchhh--------------------hcc---cccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 000000000 000 00001123588999999999998889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC----HHHHhhcccccCCc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPR 329 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~evl~hp~~~~~~ 329 (879)
||...................+.....++.+.+++.+||..||++||+ ++++++||||+...
T Consensus 229 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~ 296 (316)
T cd05574 229 TTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN 296 (316)
T ss_pred CCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence 776554443333333333222333335678999999999999999999 99999999998754
No 226
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.95 E-value=1.4e-28 Score=262.66 Aligned_cols=206 Identities=16% Similarity=0.172 Sum_probs=160.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+ ....|++|||+++++|.++++.. +.+++..+..++.||+.||+|||++||+||||||
T Consensus 59 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p 134 (267)
T cd06628 59 LLKELQHENIVQYLG-SSLD--ADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKG 134 (267)
T ss_pred HHHhcCCCCeeeEEE-EEEe--CCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCH
Confidence 455567888877666 4433 44789999999999999999654 5689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||.++...........
T Consensus 135 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~------------------------------------------------- 165 (267)
T cd06628 135 ANILVDNKGGIKISDFGISKKLEANSLSTKT------------------------------------------------- 165 (267)
T ss_pred HHEEEcCCCCEEecccCCCcccccccccCCc-------------------------------------------------
Confidence 9999999999999999999764221000000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
........|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 -----------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~ 210 (267)
T cd06628 166 -----------------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210 (267)
T ss_pred -----------------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCC
Confidence 000112467889999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||........ ...+.....+......+..+.+++.+||++||.+||++.++++||||
T Consensus 211 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 211 PFPDCTQLQA-IFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CCCCccHHHH-HHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 7765443332 22333333344444566788999999999999999999999999997
No 227
>PTZ00421 coronin; Provisional
Probab=99.95 E-value=5.7e-26 Score=257.84 Aligned_cols=274 Identities=13% Similarity=0.225 Sum_probs=209.0
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCc------CcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE------NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 568 ~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~------~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
-..|+....++|+..+++++.+.....|+...+... ......+....+|.+.|.+++|+|.++++|++|+.||+
T Consensus 20 ~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dgt 99 (493)
T PTZ00421 20 FLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGT 99 (493)
T ss_pred eeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCE
Confidence 345556666777666777777777777765432110 00011122345789999999999976889999999999
Q ss_pred EEEEEcCCC-------eEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCC
Q 002801 642 VQVWDVSRS-------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLD 713 (879)
Q Consensus 642 V~vwd~~~~-------~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~ 713 (879)
|++||+.++ +++..+.+|...|.+++|+|...++|++|+.|++|+|||+++++.+..+.. ...|.+++|+|+
T Consensus 100 IkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spd 179 (493)
T PTZ00421 100 IMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLD 179 (493)
T ss_pred EEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECC
Confidence 999999765 356778899999999999994457999999999999999999998888874 567999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCC-EEEEEEc-CCCEEEEEE----cCCcEEEEecCCCcccccCCceE
Q 002801 714 SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKT-VSYVKFV-DATTLVSAS----TDNTLKLWDLSMCTSRVIDTPLH 787 (879)
Q Consensus 714 ~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~-V~~v~fs-~~~~l~s~s----~D~~i~lwd~~~~~~~~~~~~~~ 787 (879)
+.+|++|+.|+.|++||+++++. +..+.+|... +..+.|. ++..+++++ .|++|++||+++.. .++.
T Consensus 180 -G~lLatgs~Dg~IrIwD~rsg~~-v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~-----~p~~ 252 (493)
T PTZ00421 180 -GSLLCTTSKDKKLNIIDPRDGTI-VSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA-----SPYS 252 (493)
T ss_pred -CCEEEEecCCCEEEEEECCCCcE-EEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC-----Ccee
Confidence 89999999999999999999884 7788888765 4566777 667777654 47999999998763 3444
Q ss_pred EEeCC-CCcEEEEEEecCCCEEEEEe-CCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCC
Q 002801 788 SFTGH-TNVKNFVGLSVWDGYVATGS-ETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQS 860 (879)
Q Consensus 788 ~~~~h-~~~v~~v~~sp~~~~lasgs-~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 860 (879)
....+ ...+....|++++.+|++|| .|+.|++|++..++++....+.. ..++.++||.|.-
T Consensus 253 ~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s------------~~~~~g~~~~pk~ 315 (493)
T PTZ00421 253 TVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSS------------VEPHKGLCMMPKW 315 (493)
T ss_pred EeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccC------------CCCCcceEecccc
Confidence 44433 34566678999999888877 59999999999888776655433 3346677777653
No 228
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=1.2e-28 Score=267.23 Aligned_cols=204 Identities=15% Similarity=0.161 Sum_probs=159.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+ ....|++|||+.|++|.+++.+. .+++.++..++.||+.||+|||++||+|+||||
T Consensus 69 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p 143 (296)
T cd06655 69 VMKELKNPNIVNFLD-SFLV--GDELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIHRDIKS 143 (296)
T ss_pred HHHhcCCCceeeeee-eEec--CceEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 344557777777666 4433 34689999999999999999543 589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++........
T Consensus 144 ~Nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------------- 170 (296)
T cd06655 144 DNVLLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------------- 170 (296)
T ss_pred HHEEECCCCCEEEccCccchhcccccc-----------------------------------------------------
Confidence 999999999999999999865321100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 171 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~ 213 (296)
T cd06655 171 -------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213 (296)
T ss_pred -------------------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 0011367889999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccC-CCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
||................. ........++.+.++|.+||..||.+||++.++++||||+...
T Consensus 214 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 214 PYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred CCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 7765544333222221111 1122334567888999999999999999999999999998644
No 229
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.95 E-value=5.8e-29 Score=269.21 Aligned_cols=207 Identities=17% Similarity=0.261 Sum_probs=159.7
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+....|++++..+. .+. .....|++|||+++++|.+++.. ..+++.++..++.||+.||+|||++||+|||||
T Consensus 71 ~~l~~l~h~~ii~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlk 145 (292)
T cd06658 71 VIMRDYHHENVVDMYN-SYL--VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 145 (292)
T ss_pred HHHHhCCCCcHHHHHH-hee--cCCeEEEEEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCC
Confidence 3445567787777666 332 23467999999999999999854 358999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++|+|||++........
T Consensus 146 p~Nill~~~~~~kL~dfg~~~~~~~~~~---------------------------------------------------- 173 (292)
T cd06658 146 SDSILLTSDGRIKLSDFGFCAQVSKEVP---------------------------------------------------- 173 (292)
T ss_pred HHHEEEcCCCCEEEccCcchhhcccccc----------------------------------------------------
Confidence 9999999999999999999864311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 174 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~ 215 (292)
T cd06658 174 --------------------------------------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 215 (292)
T ss_pred --------------------------------------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 0012367899999999988889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCch
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~ 332 (879)
||...... ..+..+.....+ +.....++.+.+++.+||..||.+|||++++++||||.....+.
T Consensus 216 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 216 PPYFNEPPL-QAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred CCCCCCCHH-HHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 77544332 222222222111 12223556788999999999999999999999999999665544
No 230
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.95 E-value=1.2e-28 Score=265.92 Aligned_cols=203 Identities=18% Similarity=0.234 Sum_probs=153.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|+||||+ |++|.+++......+++.+++.++.||+.||.|||++||+|+||||
T Consensus 52 ~l~~~~~~~i~~~~~-~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p 127 (286)
T cd07832 52 ALQACQHPYVVKLLD-VFPH--GSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKP 127 (286)
T ss_pred HHHhCCCCCCcceee-EEec--CCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCH
Confidence 344556888887776 4433 45689999999 9999999966557799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++.........
T Consensus 128 ~ni~~~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------------- 155 (286)
T cd07832 128 ANLLISADGVLKIADFGLARLFSEEEPR---------------------------------------------------- 155 (286)
T ss_pred HHEEEcCCCcEEEeeeeecccccCCCCC----------------------------------------------------
Confidence 9999999999999999998664221000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~-- 267 (879)
......|+.+|+|||.+.+.. ++.++|||||||++|||++
T Consensus 156 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~ 198 (286)
T cd07832 156 -------------------------------------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGS 198 (286)
T ss_pred -------------------------------------ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCC
Confidence 001236799999999987654 6999999999999999999
Q ss_pred CCCCChhhHhHHhhhccc---------------------CC--------CchhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 PFSTGEEKTRTMSSLRHR---------------------VL--------PPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~---------------------~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
|++...........+... .. ..........+.+||.+||..+|.+||++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 278 (286)
T cd07832 199 PLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAE 278 (286)
T ss_pred cCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHH
Confidence 443332221111111000 00 0111234567889999999999999999999
Q ss_pred Hhhccccc
Q 002801 319 LLQSEFLN 326 (879)
Q Consensus 319 vl~hp~~~ 326 (879)
+++||||.
T Consensus 279 ~l~h~~~~ 286 (286)
T cd07832 279 ALRHPYFT 286 (286)
T ss_pred HhhCcCcC
Confidence 99999984
No 231
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.95 E-value=1.3e-28 Score=262.88 Aligned_cols=201 Identities=13% Similarity=0.118 Sum_probs=156.2
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+...+|++++..++ .+. .....|+||||+++++|.+++.+....+++.+++.++.||+.||+|||++||+|||
T Consensus 56 e~~~l~~l~h~~iv~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~d 132 (266)
T cd05064 56 EALTLGQFDHSNIVRLEG-VIT--RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKG 132 (266)
T ss_pred HHHHHhcCCCCCcCeEEE-EEe--cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 333445567888888776 443 24578999999999999999976556789999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.+|++|||.+.........
T Consensus 133 ikp~nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------- 163 (266)
T cd05064 133 LAAHKVLVNSDLVCKISGFRRLQEDKSEAIY------------------------------------------------- 163 (266)
T ss_pred ccHhhEEEcCCCcEEECCCcccccccccchh-------------------------------------------------
Confidence 9999999999999999999986442110000
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~ 203 (266)
T cd05064 164 ----------------------------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203 (266)
T ss_pred ----------------------------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhc
Confidence 0001234678999999999899999999999999999775
Q ss_pred ----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 ----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 ----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... .....+.....++.+...+..+.+++.+||..+|.+||++.++++
T Consensus 204 ~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 204 YGERPYWDMSGQ-DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred CCCCCcCcCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 77544333 233333444444455566778899999999999999999999875
No 232
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.95 E-value=1.6e-28 Score=261.38 Aligned_cols=203 Identities=20% Similarity=0.261 Sum_probs=162.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---CCCCChhHHHHHHHHHHHHHHhhh-----hcC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAH-----SQG 102 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lH-----s~g 102 (879)
.+...+|++++..++ .+.++.....|++|||+++++|.+++... ..++++.+++.++.||+.||+||| +.+
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~ 130 (265)
T cd08217 52 ILRELKHPNIVRYYD-RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT 130 (265)
T ss_pred HHHhcCCCccceeee-eeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc
Confidence 445567888877666 44444455689999999999999998442 457899999999999999999999 999
Q ss_pred cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccc
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+|+||||+||+++.++.+|++|||++.........
T Consensus 131 i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-------------------------------------------- 166 (265)
T cd08217 131 VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSF-------------------------------------------- 166 (265)
T ss_pred ceecCCCHHHEEEecCCCEEEecccccccccCCccc--------------------------------------------
Confidence 999999999999999999999999998764221000
Q ss_pred cccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHH
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil 262 (879)
.....|++.|+|||.+.+..++.++|||||||++
T Consensus 167 ----------------------------------------------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il 200 (265)
T cd08217 167 ----------------------------------------------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLI 200 (265)
T ss_pred ----------------------------------------------ccccccCCCccChhhhcCCCCCchhHHHHHHHHH
Confidence 0123678899999999888899999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
|+|++ ||.... .......+.....++.....+..+.+++.+||..+|.+||++.++++|||+
T Consensus 201 ~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 201 YELCALSPPFTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHCCCcccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 99999 665443 333344444444444445566889999999999999999999999999996
No 233
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=2.6e-28 Score=262.76 Aligned_cols=196 Identities=17% Similarity=0.218 Sum_probs=147.9
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ .+.+.....+|++|||+. ++|.+++......+++.+++.++.||+.||.|||+.||+||||||+||++
T Consensus 56 ~h~~i~~~~~-~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l 133 (282)
T cd07831 56 PHPNILRLIE-VLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI 133 (282)
T ss_pred CCCCccceEE-EEecCCCCcEEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE
Confidence 4777777665 555554457899999996 48888886544678999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+. +.+|++|||+++......
T Consensus 134 ~~-~~~kl~dfg~~~~~~~~~----------------------------------------------------------- 153 (282)
T cd07831 134 KD-DILKLADFGSCRGIYSKP----------------------------------------------------------- 153 (282)
T ss_pred cC-CCeEEEecccccccccCC-----------------------------------------------------------
Confidence 99 999999999986532110
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
......++.+|+|||++.. ..++.++|||||||++|||++ ||..
T Consensus 154 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~ 201 (282)
T cd07831 154 --------------------------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPG 201 (282)
T ss_pred --------------------------------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCC
Confidence 0011357889999998755 447899999999999999998 6644
Q ss_pred ChhhHhHHhhh--ccc-----------------CCC--------chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 272 GEEKTRTMSSL--RHR-----------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 272 ~~~~~~~~~~~--~~~-----------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
........... ... ..+ +.....+..+.++|.+||.++|++||++.++++|||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~ 281 (282)
T cd07831 202 TNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281 (282)
T ss_pred CCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCC
Confidence 32221111100 000 000 111234577889999999999999999999999999
Q ss_pred c
Q 002801 325 L 325 (879)
Q Consensus 325 ~ 325 (879)
|
T Consensus 282 ~ 282 (282)
T cd07831 282 F 282 (282)
T ss_pred C
Confidence 7
No 234
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.95 E-value=3.4e-28 Score=260.76 Aligned_cols=203 Identities=17% Similarity=0.184 Sum_probs=159.3
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ .+.++ ..+|+++||+.+++|.+++... ++++..++.++.||+.||.|||++||+|+||+|+
T Consensus 53 l~~l~h~~i~~~~~-~~~~~--~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ 127 (274)
T cd06609 53 LSQCRSPYITKYYG-SFLKG--SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAA 127 (274)
T ss_pred HHHcCCCCeeeeeE-EEEEC--CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence 34456777777665 33332 5689999999999999999654 6899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++++|||+++.......
T Consensus 128 ni~i~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------------ 153 (274)
T cd06609 128 NILLSEEGDVKLADFGVSGQLTSTMS------------------------------------------------------ 153 (274)
T ss_pred HEEECCCCCEEEcccccceeeccccc------------------------------------------------------
Confidence 99999999999999999876422100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
......|+..|+|||.+.+..++.++|||||||++|||++ |
T Consensus 154 ------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p 197 (274)
T cd06609 154 ------------------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPP 197 (274)
T ss_pred ------------------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 0122367888999999998889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhc-cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
|....... ....+.....+..... .++.+.+++.+||..+|++|||++++++||||.....
T Consensus 198 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 198 LSDLHPMR-VLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred cccCchHH-HHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 65443322 2222222222222222 5678899999999999999999999999999987543
No 235
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=8.3e-27 Score=244.66 Aligned_cols=262 Identities=24% Similarity=0.315 Sum_probs=224.4
Q ss_pred cCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCee
Q 002801 542 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 621 (879)
Q Consensus 542 d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 621 (879)
.-.+.+++..+..+...+. --...|+++.|-.||++||+|+..|.|+|||..+. .. ......|..++.
T Consensus 47 S~rvqly~~~~~~~~k~~s-----rFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r-----~i--LR~~~ah~apv~ 114 (487)
T KOG0310|consen 47 SVRVQLYSSVTRSVRKTFS-----RFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSR-----VI--LRQLYAHQAPVH 114 (487)
T ss_pred ccEEEEEecchhhhhhhHH-----hhccceeEEEeecCCeEEEccCCcCcEEEeccccH-----HH--HHHHhhccCcee
Confidence 4467778777665554433 23578999999999999999999999999996541 00 112235889999
Q ss_pred EEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC-ceEEEEe
Q 002801 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG-VSIGTIK 700 (879)
Q Consensus 622 ~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~-~~i~~~~ 700 (879)
.+.|+|.++..+++|+.|+.+++||+.+......+.+|+.-|.|.+|+|.++.+++|||.||+|++||+++. ..+.++.
T Consensus 115 ~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln 194 (487)
T KOG0310|consen 115 VTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN 194 (487)
T ss_pred EEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec
Confidence 999999999999999999999999999998777889999999999999988999999999999999999987 7889999
Q ss_pred cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcc
Q 002801 701 TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTS 779 (879)
Q Consensus 701 ~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~ 779 (879)
+..+|.+|.+-|. |..|++++ ...|++||+.++.+.+..+..|.+.|+|+.+. ++..|+|||-|+.+++||+.+.
T Consensus 195 hg~pVe~vl~lps-gs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~-- 270 (487)
T KOG0310|consen 195 HGCPVESVLALPS-GSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY-- 270 (487)
T ss_pred CCCceeeEEEcCC-CCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce--
Confidence 9999999999998 77888776 56899999998876677777799999999998 9999999999999999998775
Q ss_pred cccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCC
Q 002801 780 RVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF 824 (879)
Q Consensus 780 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~ 824 (879)
+.++.+. -.++|.+++.+|+++.++.|..||.+.+-+...
T Consensus 271 ----Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~ 310 (487)
T KOG0310|consen 271 ----KVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREV 310 (487)
T ss_pred ----EEEEeee-cccceeeEEecCCCceEEEecccceeeeehhhc
Confidence 5666665 567899999999999999999999988875543
No 236
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=1.6e-28 Score=266.34 Aligned_cols=204 Identities=14% Similarity=0.164 Sum_probs=158.6
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ .+.+ ....|+||||+.|++|.+++.. ..+++.++..++.||+.||+|||++||+||||||+
T Consensus 71 l~~~~h~~v~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~ 145 (296)
T cd06654 71 MRENKNPNIVNYLD-SYLV--GDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145 (296)
T ss_pred HHhCCCCCEeeEEE-EEEe--CCEEEEeecccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence 34457777777665 3332 3468999999999999999954 35799999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+|++|||++........
T Consensus 146 Nill~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------------ 171 (296)
T cd06654 146 NILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------------ 171 (296)
T ss_pred HEEEcCCCCEEECccccchhcccccc------------------------------------------------------
Confidence 99999999999999999865311100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
......|++.|+|||.+.+..++.++|||||||++|||++ |
T Consensus 172 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~p 215 (296)
T cd06654 172 ------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215 (296)
T ss_pred ------------------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCC
Confidence 0012367889999999988889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCC-chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 269 FSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
|..................+ +......+.+.+++.+||.++|.+||++.++++||||.....
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 216 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred CCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 76554433322222222111 222345677889999999999999999999999999986543
No 237
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.95 E-value=6.3e-27 Score=254.18 Aligned_cols=275 Identities=21% Similarity=0.328 Sum_probs=229.9
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccc-eEEeccCCCeeE-EEEeCCCCCeEEEeeCCCc
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYP-VVEMASRSKLSS-ICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~-~~~~~~~~~i~~-l~~~~~~~~~l~s~~~dg~ 641 (879)
+.+|...|+.+++.++ ..++++|.||++++|+-.... ..+ .....+.+-|.+ +|+-+.++..|++|+.|++
T Consensus 10 l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~------~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~ 82 (745)
T KOG0301|consen 10 LEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQ------YLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTT 82 (745)
T ss_pred eccCccchheeEecCC-eEEeecCCCCceeeeeccCcc------cccceecccCcceeeccceeccccCcceEeecccce
Confidence 4589999999998754 478999999999999854311 111 112235666776 8888766778999999999
Q ss_pred EEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEE
Q 002801 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 642 V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~t 720 (879)
|.+|...+..++..+++|+..|+|++... ++. ++|||.|.++++|-.. ++...+. |.+.|..|+.-|. + .++|
T Consensus 83 i~v~~~~~~~P~~~LkgH~snVC~ls~~~-~~~-~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e-~-~~vT 156 (745)
T KOG0301|consen 83 IIVFKLSQAEPLYTLKGHKSNVCSLSIGE-DGT-LISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPE-N-TYVT 156 (745)
T ss_pred EEEEecCCCCchhhhhccccceeeeecCC-cCc-eEecccccceEEecch--hhhcccCCcchheeeeeecCC-C-cEEe
Confidence 99999999999999999999999999776 565 9999999999999765 3444454 5678999999998 4 8999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEE
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~ 800 (879)
||.|.+|++|.- ++ .+.+|.+|...|..+++.++..++|++.||.|++|++. + .++..+.||++-|+++.
T Consensus 157 gsaDKtIklWk~--~~-~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~-g------e~l~~~~ghtn~vYsis 226 (745)
T KOG0301|consen 157 GSADKTIKLWKG--GT-LLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLD-G------EVLLEMHGHTNFVYSIS 226 (745)
T ss_pred ccCcceeeeccC--Cc-hhhhhccchhheeeeEEecCCCeEeecCCceEEEEecc-C------ceeeeeeccceEEEEEE
Confidence 999999999975 33 48899999999999999988899999999999999994 3 78999999999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 801 LSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 801 ~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
..++++.|+|+|+|++++||+.. ...+.+..+ ...|+++++-++|+ +++|++||.|+||..
T Consensus 227 ~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lP-------------ttsiWsa~~L~NgD--Ivvg~SDG~VrVfT~ 287 (745)
T KOG0301|consen 227 MALSDGLIVSTGEDRTLRIWKKD--ECVQVITLP-------------TTSIWSAKVLLNGD--IVVGGSDGRVRVFTV 287 (745)
T ss_pred ecCCCCeEEEecCCceEEEeecC--ceEEEEecC-------------ccceEEEEEeeCCC--EEEeccCceEEEEEe
Confidence 88889999999999999999987 444444322 33599999999999 999999999999964
No 238
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.95 E-value=9.9e-29 Score=263.40 Aligned_cols=202 Identities=20% Similarity=0.209 Sum_probs=159.3
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlKP 110 (879)
+....|++++..++ .+.++ ...|++|||+.+++|.+++......+++..+..++.||+.||+|||+ .||+|+||||
T Consensus 53 l~~~~~~~i~~~~~-~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~ 129 (265)
T cd06605 53 LHKCNSPYIVGFYG-AFYNN--GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKP 129 (265)
T ss_pred HHHCCCCchhhhhe-eeecC--CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCH
Confidence 34456888877666 44433 56899999999999999996654678999999999999999999999 9999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||.+.......
T Consensus 130 ~ni~~~~~~~~~l~d~g~~~~~~~~~------------------------------------------------------ 155 (265)
T cd06605 130 SNILVNSRGQIKLCDFGVSGQLVNSL------------------------------------------------------ 155 (265)
T ss_pred HHEEECCCCCEEEeecccchhhHHHH------------------------------------------------------
Confidence 99999999999999999885431100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
. ....|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 156 -------------------------------------~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 197 (265)
T cd06605 156 -------------------------------------A-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF 197 (265)
T ss_pred -------------------------------------h-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 0 01367888999999998889999999999999999999
Q ss_pred CCCCCh----hhHhHHhhhcccCCCchhhc-cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 PFSTGE----EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||.... .....+..+.....+..... .++.+.++|.+||..+|.+|||+.+++.||||+..
T Consensus 198 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 198 PYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred CCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 775441 22223333333322222222 56788999999999999999999999999999754
No 239
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.95 E-value=1.5e-28 Score=260.58 Aligned_cols=201 Identities=19% Similarity=0.220 Sum_probs=160.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+.+ ...+|++|||+.|++|.+++.+. ...+++.++..++.|++.||.|||+.||+|+|||
T Consensus 52 ~l~~~~h~~i~~~~~-~~~~--~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~ 128 (256)
T cd08221 52 ILSLLQHPNIIAYYN-HFMD--DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIK 128 (256)
T ss_pred HHHhCCCCCeeEEEe-EEec--CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 455567888887776 3433 35689999999999999999554 4568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++.......
T Consensus 129 p~ni~~~~~~~~kl~d~~~~~~~~~~~~---------------------------------------------------- 156 (256)
T cd08221 129 TLNIFLTKAGLIKLGDFGISKILGSEYS---------------------------------------------------- 156 (256)
T ss_pred hHhEEEeCCCCEEECcCcceEEcccccc----------------------------------------------------
Confidence 9999999999999999999865321100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~ 198 (256)
T cd08221 157 --------------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLK 198 (256)
T ss_pred --------------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCC
Confidence 0012367899999999988889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..... ......+....+++.....+..+.+++.+||.++|.+||++.++++|||+
T Consensus 199 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 199 RTFDATNP-LNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred CCCCCCCH-HHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 6654333 33333333444444445567789999999999999999999999999986
No 240
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=3.1e-28 Score=263.02 Aligned_cols=208 Identities=16% Similarity=0.180 Sum_probs=158.6
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
..+.+.+|++++..++ .+.++....+|++|||++|++|.+++. .....+++..+..|+.||+.||+|||+.||+|+
T Consensus 51 ~~l~~l~h~~iv~~~~-~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~ 129 (287)
T cd06621 51 EINKSCKSPYIVKYYG-AFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHR 129 (287)
T ss_pred HHHHhCCCCCeeeeee-EEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 3455667888888776 555555667899999999999998863 234568999999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||+|+||+++.++.++++|||++.......
T Consensus 130 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------------- 159 (287)
T cd06621 130 DIKPSNILLTRKGQVKLCDFGVSGELVNSL-------------------------------------------------- 159 (287)
T ss_pred CCCHHHEEEecCCeEEEeeccccccccccc--------------------------------------------------
Confidence 999999999999999999999985531110
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell 266 (879)
.....++..|+|||.+.+..++.++|||||||++|||+
T Consensus 160 ------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~ 197 (287)
T cd06621 160 ------------------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVA 197 (287)
T ss_pred ------------------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence 01125678899999998888999999999999999999
Q ss_pred c---CCCCCh----hhHhHHhhhcccCCCc---hh---hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 267 C---PFSTGE----EKTRTMSSLRHRVLPP---QL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 267 ~---pf~~~~----~~~~~~~~~~~~~~~~---~~---~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
+ ||.... ........+.....+. .. ...++.+.+|+.+||.++|.+|||+.|+++||||.....
T Consensus 198 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 198 QNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred hCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 9 665431 1111222222211111 10 112356789999999999999999999999999975443
No 241
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.95 E-value=2.3e-28 Score=273.78 Aligned_cols=196 Identities=14% Similarity=0.154 Sum_probs=150.7
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------------------------------
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------------------------------------- 76 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------------------------------------- 76 (879)
+|+|++..++ .|.+ ....|++||||+||+|.+++....
T Consensus 97 ~HpnIv~l~~-~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 173 (375)
T cd05104 97 NHINIVNLLG-ACTV--GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKP 173 (375)
T ss_pred CCcceeeeee-eecc--CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCC
Confidence 7888888776 5543 346899999999999999984321
Q ss_pred -----------------------------------CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCe
Q 002801 77 -----------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 121 (879)
Q Consensus 77 -----------------------------------~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~v 121 (879)
..+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~ 253 (375)
T cd05104 174 GVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRIT 253 (375)
T ss_pred CcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcE
Confidence 247888999999999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeecc
Q 002801 122 SFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 201 (879)
Q Consensus 122 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (879)
|++|||+++........
T Consensus 254 kl~DfG~a~~~~~~~~~--------------------------------------------------------------- 270 (375)
T cd05104 254 KICDFGLARDIRNDSNY--------------------------------------------------------------- 270 (375)
T ss_pred EEecCccceeccCcccc---------------------------------------------------------------
Confidence 99999998754211000
Q ss_pred ccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHh
Q 002801 202 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTR 277 (879)
Q Consensus 202 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~ 277 (879)
.......++..|+|||++.+..++.++|||||||+||||++ ||........
T Consensus 271 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~ 325 (375)
T cd05104 271 -------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK 325 (375)
T ss_pred -------------------------cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH
Confidence 00011234667999999999999999999999999999996 6654433333
Q ss_pred HHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 278 TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
....+.....+..+...+.++.+|+.+||..||++||++.++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 326 FYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 334444333333333445788999999999999999999999863
No 242
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.95 E-value=1.6e-28 Score=267.24 Aligned_cols=206 Identities=14% Similarity=0.156 Sum_probs=154.8
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+...+|++++..++ ++.+ ....|++|||+. ++|.+++.+....+++..++.++.||+.||+|||++||+|+|||
T Consensus 56 ~~l~~l~h~nI~~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlk 131 (301)
T cd07873 56 SLLKDLKHANIVTLHD-IIHT--EKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLK 131 (301)
T ss_pred HHHHhcCCCCcceEEE-EEec--CCeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence 3445567888888777 4433 346899999996 58999986655678999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++....+..
T Consensus 132 p~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 159 (301)
T cd07873 132 PQNLLINERGELKLADFGLARAKSIPTK---------------------------------------------------- 159 (301)
T ss_pred HHHEEECCCCcEEECcCcchhccCCCCC----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~- 267 (879)
......+++.|+|||.+.+. .++.++|||||||++|||++
T Consensus 160 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg 201 (301)
T cd07873 160 --------------------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTG 201 (301)
T ss_pred --------------------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhC
Confidence 00113568899999998764 48899999999999999999
Q ss_pred --CCCCChhhHhHHh--hhccc------------------CCCc--------hhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 --PFSTGEEKTRTMS--SLRHR------------------VLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 --pf~~~~~~~~~~~--~~~~~------------------~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||........... ..... ..+. .....++.+.+||.+||+.||.+|||+.
T Consensus 202 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ 281 (301)
T cd07873 202 RPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAE 281 (301)
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHH
Confidence 6654332211110 00000 0000 1123456788999999999999999999
Q ss_pred HHhhcccccCCc
Q 002801 318 ELLQSEFLNEPR 329 (879)
Q Consensus 318 evl~hp~~~~~~ 329 (879)
|+++||||..+.
T Consensus 282 eil~h~~f~~~~ 293 (301)
T cd07873 282 EAMKHPYFHCLG 293 (301)
T ss_pred HHhcCccccccc
Confidence 999999998654
No 243
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=253.97 Aligned_cols=203 Identities=18% Similarity=0.190 Sum_probs=141.9
Q ss_pred ccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccc
Q 002801 51 EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 129 (879)
Q Consensus 51 ~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~ 129 (879)
+.....+||.|.+ |.|+.++|+. ...+++...+++|.+||+++|.|||+.+++|.||||+|||+..+...+.-.-+..
T Consensus 161 dyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 161 DYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred hccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc
Confidence 3455678888888 8899999966 4457999999999999999999999999999999999999965544433222211
Q ss_pred -cCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccc
Q 002801 130 -SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI 208 (879)
Q Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (879)
.... .......++
T Consensus 240 ~~~~r------------------------------------------------------------------~~ks~~I~v 253 (415)
T KOG0671|consen 240 VCFIR------------------------------------------------------------------PLKSTAIKV 253 (415)
T ss_pred cceec------------------------------------------------------------------cCCCcceEE
Confidence 0000 000112233
Q ss_pred cccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCCh--hhHhHHhhhc
Q 002801 209 LDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE--EKTRTMSSLR 283 (879)
Q Consensus 209 ~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~--~~~~~~~~~~ 283 (879)
+|||.+....+ -.+..+-|..|+|||++.|-+++.++||||+||||+||.+ -|.+.+ ++.+.|..+.
T Consensus 254 IDFGsAtf~~e--------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl 325 (415)
T KOG0671|consen 254 IDFGSATFDHE--------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL 325 (415)
T ss_pred EecCCcceecc--------CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence 44443221111 1134578999999999999999999999999999999999 454444 3334444443
Q ss_pred ccCCCch-----------------------------------hhc--------cChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 284 HRVLPPQ-----------------------------------LLL--------KFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 284 ~~~~~~~-----------------------------------~~~--------~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
+. +|.. +.. ....+.+|+.+||..||.+|+|+.|+|
T Consensus 326 Gp-~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL 404 (415)
T KOG0671|consen 326 GP-IPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL 404 (415)
T ss_pred CC-CcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence 31 1110 000 012367999999999999999999999
Q ss_pred hcccccCCc
Q 002801 321 QSEFLNEPR 329 (879)
Q Consensus 321 ~hp~~~~~~ 329 (879)
+||||+...
T Consensus 405 ~HpFF~~~~ 413 (415)
T KOG0671|consen 405 SHPFFARLT 413 (415)
T ss_pred cCHHhhcCC
Confidence 999998754
No 244
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.95 E-value=1.8e-28 Score=274.46 Aligned_cols=195 Identities=16% Similarity=0.176 Sum_probs=149.1
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC----------------------------------------
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------------------------------- 75 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------------------------------- 75 (879)
+|++++..++ .|.+ ....|++||||.+|+|.+++.+.
T Consensus 100 ~h~nIv~~~~-~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (374)
T cd05106 100 QHKNIVNLLG-ACTH--GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQ 176 (374)
T ss_pred cCCceeeEee-EecC--CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccc
Confidence 6888887766 5543 34689999999999999988432
Q ss_pred -----------------------------CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeec
Q 002801 76 -----------------------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIES 126 (879)
Q Consensus 76 -----------------------------~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~df 126 (879)
..++++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~Df 256 (374)
T cd05106 177 GSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDF 256 (374)
T ss_pred ccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeec
Confidence 124788899999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccc
Q 002801 127 ASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEH 206 (879)
Q Consensus 127 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (879)
|+++........
T Consensus 257 Gla~~~~~~~~~-------------------------------------------------------------------- 268 (374)
T cd05106 257 GLARDIMNDSNY-------------------------------------------------------------------- 268 (374)
T ss_pred eeeeeccCCcce--------------------------------------------------------------------
Confidence 998653211000
Q ss_pred cccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhh
Q 002801 207 KILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSL 282 (879)
Q Consensus 207 ~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~ 282 (879)
.......++..|||||++.+..++.++|||||||+||||++ ||............+
T Consensus 269 --------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~ 328 (374)
T cd05106 269 --------------------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV 328 (374)
T ss_pred --------------------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH
Confidence 00011234667999999988889999999999999999985 775544333333333
Q ss_pred cccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 283 RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
.....++.....++.+.+++.+||+.||.+||++.++++
T Consensus 329 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 329 KRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 333233333345688999999999999999999999976
No 245
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.95 E-value=2.9e-28 Score=262.16 Aligned_cols=204 Identities=19% Similarity=0.230 Sum_probs=158.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||+++++|.+++.+....+++.+++.++.|++.||.|||++||+|+||||
T Consensus 55 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p 131 (280)
T cd06611 55 ILSECKHPNIVGLYE-AYFY--ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKA 131 (280)
T ss_pred HHHhCCCCceeEEEE-EEec--CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCh
Confidence 344556888877766 4433 4468999999999999999976656799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 132 ~nili~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------------- 158 (280)
T cd06611 132 GNILLTLDGDVKLADFGVSAKNKSTLQ----------------------------------------------------- 158 (280)
T ss_pred hhEEECCCCCEEEccCccchhhccccc-----------------------------------------------------
Confidence 999999999999999998754311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil~el 265 (879)
......|++.|+|||++. +.+++.++|||||||++|||
T Consensus 159 -------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l 201 (280)
T cd06611 159 -------------------------------------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIEL 201 (280)
T ss_pred -------------------------------------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHH
Confidence 012246788999999985 34578899999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
++ ||...... ..+..+.....+ ......+..+.+++.+||+.+|.+||++.++++||||...
T Consensus 202 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 202 AQMEPPHHELNPM-RVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HhCCCCcccCCHH-HHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 99 66543322 222233222211 1223456788999999999999999999999999999875
No 246
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95 E-value=1.8e-28 Score=264.52 Aligned_cols=205 Identities=16% Similarity=0.157 Sum_probs=157.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..+. .+.+ +...|++|||+.+++|..++.. ....+++..+..++.|++.||.|||++||+|||||
T Consensus 53 il~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dik 129 (285)
T cd05632 53 ILEKVNSQFVVNLAY-AYET--KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLK 129 (285)
T ss_pred HHHHcCCcCceeEEE-EEec--CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence 444567777776655 3322 3468999999999999988843 23468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||++.......
T Consensus 130 p~Nili~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------------- 156 (285)
T cd05632 130 PENILLDDYGHIRISDLGLAVKIPEGE----------------------------------------------------- 156 (285)
T ss_pred HHHEEECCCCCEEEecCCcceecCCCC-----------------------------------------------------
Confidence 999999999999999999885421100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 198 (285)
T cd05632 157 --------------------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198 (285)
T ss_pred --------------------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCC
Confidence 0012368999999999998889999999999999999999
Q ss_pred -CCCCChhhHhHHhhh--cccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCc
Q 002801 268 -PFSTGEEKTRTMSSL--RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~ 329 (879)
||............. .....+......++.+.+|+.+||..||++||+ +.+++.|+||+...
T Consensus 199 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05632 199 SPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN 268 (285)
T ss_pred CCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence 876543322111111 111112222345677889999999999999999 88999999998764
No 247
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.95 E-value=1.9e-28 Score=259.69 Aligned_cols=198 Identities=16% Similarity=0.184 Sum_probs=155.2
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
..+|++++..++ .+.+ ....|++|||+.+++|.+++......+++.+++.++.||+.||.|||+.||+|+||+|+||
T Consensus 54 ~l~~~~i~~~~~-~~~~--~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni 130 (256)
T cd06612 54 QCDSPYIVKYYG-SYFK--NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNI 130 (256)
T ss_pred hCCCCcEeeeee-eeec--CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceE
Confidence 347788877666 3433 3568999999999999999976567899999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
+++.++.++++|||++........
T Consensus 131 ~~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------------- 154 (256)
T cd06612 131 LLNEEGQAKLADFGVSGQLTDTMA-------------------------------------------------------- 154 (256)
T ss_pred EECCCCcEEEcccccchhcccCcc--------------------------------------------------------
Confidence 999999999999999865321100
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......|+..|+|||.+.+..++.++|||||||++|||++ ||.
T Consensus 155 ----------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~ 200 (256)
T cd06612 155 ----------------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYS 200 (256)
T ss_pred ----------------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 0012357888999999988889999999999999999999 665
Q ss_pred CChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 271 TGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
.......... ......+ ......+..+.+++.+||..+|.+|||+.++++||||
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 201 DIHPMRAIFM-IPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred Ccchhhhhhh-hccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 4333222211 1111111 1122345678899999999999999999999999997
No 248
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=9.5e-29 Score=268.30 Aligned_cols=206 Identities=14% Similarity=0.152 Sum_probs=159.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||++|++|.+++.+ ..+++.+++.++.|++.||.|||+.||+||||||
T Consensus 69 ~l~~~~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p 143 (297)
T cd06656 69 VMRENKNPNIVNYLD-SYLV--GDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKS 143 (297)
T ss_pred HHHhCCCCCEeeEEE-EEec--CCEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 445567888887776 3332 3468999999999999999954 3579999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.++++|||++........
T Consensus 144 ~Nili~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------------- 170 (297)
T cd06656 144 DNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------------- 170 (297)
T ss_pred HHEEECCCCCEEECcCccceEccCCcc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|+|++
T Consensus 171 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~ 213 (297)
T cd06656 171 -------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213 (297)
T ss_pred -------------------------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 0012367889999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCC-chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
||..................+ ......++.+.+|+.+||..+|.+||++.++++||||......
T Consensus 214 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (297)
T cd06656 214 PYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL 278 (297)
T ss_pred CCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccc
Confidence 775544322222222211111 1223445678899999999999999999999999999865433
No 249
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=3.9e-26 Score=226.00 Aligned_cols=276 Identities=16% Similarity=0.258 Sum_probs=220.4
Q ss_pred CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEE
Q 002801 566 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (879)
Q Consensus 566 ~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~v 644 (879)
...+.|.+|+||| ...++++++.|++|++|+++... ...+.....+.++|.|++|+. +++.+++|+.|+.+++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g-----~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~ 98 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSG-----QLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKL 98 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCC-----cccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEE
Confidence 3467899999999 55677799999999999998621 112334456899999999998 4899999999999999
Q ss_pred EEcCCCeEEEEeccCCCcEEEEEEecCCCC--EEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEe
Q 002801 645 WDVSRSQVLTEMREHERRVWSIDFSSADPT--LLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 645 wd~~~~~~~~~~~~h~~~v~sv~~sp~~~~--~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs 722 (879)
||+.++|. ..+..|..+|.++.|-+ ... .|+|||-|.+|+.||.++..++.++..+..|.++..- ..+++++.
T Consensus 99 wDL~S~Q~-~~v~~Hd~pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~---~pm~vVat 173 (347)
T KOG0647|consen 99 WDLASGQV-SQVAAHDAPVKTCHWVP-GMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVL---YPMAVVAT 173 (347)
T ss_pred EEccCCCe-eeeeecccceeEEEEec-CCCcceeEecccccceeecccCCCCeeeeeeccceeeehhcc---CceeEEEe
Confidence 99999965 45678999999999987 554 8999999999999999999999999999999888775 34788889
Q ss_pred CCCeEEEEEcCCCceeeEEEcc-CCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCC------
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIG-HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN------ 794 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~-h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~------ 794 (879)
.+..|.+|+|+++......... -+-.+.+|+.. +.+..+.||..|.+-+..+..+.. ..-.+|+.|..
T Consensus 174 a~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~----~~nFtFkCHR~~~~~~~ 249 (347)
T KOG0647|consen 174 AERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNP----KDNFTFKCHRSTNSVND 249 (347)
T ss_pred cCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCc----cCceeEEEeccCCCCCC
Confidence 9999999999887532222221 12346777665 777779999999999999988632 33356666652
Q ss_pred ---cEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEE-EEeCC
Q 002801 795 ---VKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLV-AANSS 870 (879)
Q Consensus 795 ---~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~-s~~~D 870 (879)
.|++|+|+|.-+.|+|+|.||++.+||......+.+. ..|.++|++.+|+.+|. ++| +.|.|
T Consensus 250 ~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s-------------~~~~qpItcc~fn~~G~-ifaYA~gYD 315 (347)
T KOG0647|consen 250 DVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTS-------------ETHPQPITCCSFNRNGS-IFAYALGYD 315 (347)
T ss_pred ceEEecceEeecccceEEEecCCceEEEecchhhhhhhcc-------------CcCCCccceeEecCCCC-EEEEEeecc
Confidence 4788999999999999999999999999876555433 35788999999999999 666 44444
No 250
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.95 E-value=2.4e-26 Score=260.96 Aligned_cols=274 Identities=21% Similarity=0.358 Sum_probs=238.4
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEE
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (879)
Q Consensus 567 h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd 646 (879)
|...+.+..|+ +.++++++.|++|++|+....... .....+|.+.|.++++.. .+..+++|+.|.+++|||
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i------~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd 277 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLI------LTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWD 277 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEE------EeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEe
Confidence 45677788888 568999999999999998763221 112356999999999976 589999999999999999
Q ss_pred cCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEEeCCC
Q 002801 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADH 725 (879)
Q Consensus 647 ~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~ 725 (879)
..++++...+.+|...|.++... +..+++||.|.+|++|++.+++.+.++. +.+.|.+|..+ +.++++|+.|+
T Consensus 278 ~~sg~C~~~l~gh~stv~~~~~~---~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~ 351 (537)
T KOG0274|consen 278 CSTGECTHSLQGHTSSVRCLTID---PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD---EPLLVSGSYDG 351 (537)
T ss_pred cCCCcEEEEecCCCceEEEEEcc---CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec---CCEEEEEecCc
Confidence 99999999999999999999875 4789999999999999999999999999 78889999998 57999999999
Q ss_pred eEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCC
Q 002801 726 RIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD 805 (879)
Q Consensus 726 ~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 805 (879)
+|++||+++.+ ++.++.+|...|+++.+.....+++|+.|++|++||+.+.. +++.++.+|...+..+.+ .+
T Consensus 352 ~v~VW~~~~~~-cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~-----~c~~tl~~h~~~v~~l~~--~~ 423 (537)
T KOG0274|consen 352 TVKVWDPRTGK-CLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKR-----KCIHTLQGHTSLVSSLLL--RD 423 (537)
T ss_pred eEEEEEhhhce-eeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchh-----hhhhhhcCCccccccccc--cc
Confidence 99999999888 59999999999999977533999999999999999999862 689999999998866654 57
Q ss_pred CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 806 GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 806 ~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
++|++++.|++|++||...++.+..+.-. |.+.|+++++. .. .+++++.||.+++|++
T Consensus 424 ~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~------------~~~~v~~l~~~--~~-~il~s~~~~~~~l~dl 481 (537)
T KOG0274|consen 424 NFLVSSSADGTIKLWDAEEGECLRTLEGR------------HVGGVSALALG--KE-EILCSSDDGSVKLWDL 481 (537)
T ss_pred ceeEeccccccEEEeecccCceeeeeccC------------CcccEEEeecC--cc-eEEEEecCCeeEEEec
Confidence 89999999999999999998888766511 45679999887 45 7999999999999986
No 251
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.95 E-value=4.9e-29 Score=269.77 Aligned_cols=206 Identities=17% Similarity=0.175 Sum_probs=161.4
Q ss_pred cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 21 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
..||.|... +..-.|.|++.+++ +|-.. ..-||..+|+|-+|..+|.-.+.+|+....+.|++||++|++|||.
T Consensus 433 qaFKnEVa~--lkkTRH~NIlLFMG-~~~~p---~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHA 506 (678)
T KOG0193|consen 433 QAFKNEVAV--LKKTRHENILLFMG-ACMNP---PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHA 506 (678)
T ss_pred HHHHHHHHH--Hhhcchhhheeeeh-hhcCC---ceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhh
Confidence 456666553 44557888888777 66433 3489999999999999997766789999999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
++|||||||..||+|..++.|||+|||++........+.++
T Consensus 507 K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~--------------------------------------- 547 (678)
T KOG0193|consen 507 KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL--------------------------------------- 547 (678)
T ss_pred hhhhhhhccccceEEccCCcEEEecccceeeeeeecccccc---------------------------------------
Confidence 99999999999999999999999999999653222111000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC---CCCCccCcchh
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYR 257 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwS 257 (879)
..-.|..-|||||+++. .+|++.|||||
T Consensus 548 -------------------------------------------------~qp~gsilwmAPEvIRmqd~nPfS~qSDVYa 578 (678)
T KOG0193|consen 548 -------------------------------------------------EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYA 578 (678)
T ss_pred -------------------------------------------------CCCccchhhhcHHHHhhcccCCCCcccchhh
Confidence 11245677999999974 45999999999
Q ss_pred HHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchh----hccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 258 lGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|||++|||+| ||. ....+..+..+..+.+.+.. .++..++++|+..||..++++||.+.+||.
T Consensus 579 FGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 579 FGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred hhHHHHHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 9999999999 887 55555555555555443332 234447889999999999999999999986
No 252
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.95 E-value=2.3e-28 Score=263.60 Aligned_cols=206 Identities=17% Similarity=0.289 Sum_probs=161.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+. .....|+++||+.|++|.+++.. .++++.+++.++.||+.||+|||++||+||||||
T Consensus 69 ~l~~~~h~~vv~~~~-~~~--~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p 143 (285)
T cd06648 69 IMRDYQHPNIVEMYS-SYL--VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKS 143 (285)
T ss_pred HHHHcCCCChheEEE-EEE--cCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCh
Confidence 344567888877666 322 24568999999999999999966 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||.+........
T Consensus 144 ~Nil~~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------------- 170 (285)
T cd06648 144 DSILLTSDGRVKLSDFGFCAQVSKEVP----------------------------------------------------- 170 (285)
T ss_pred hhEEEcCCCcEEEcccccchhhccCCc-----------------------------------------------------
Confidence 999999999999999998754311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 171 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~ 213 (285)
T cd06648 171 -------------------------------------RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEP 213 (285)
T ss_pred -------------------------------------ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCC
Confidence 0012367899999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCc--hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCch
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~ 332 (879)
||..... ...+..+.....+. .....++.+.+++.+||..+|.+||++.++++||||.....+.
T Consensus 214 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~ 279 (285)
T cd06648 214 PYFNEPP-LQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPS 279 (285)
T ss_pred CCcCCCH-HHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCcc
Confidence 7755433 23333333332211 1222557889999999999999999999999999998766543
No 253
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.95 E-value=2e-28 Score=265.95 Aligned_cols=207 Identities=16% Similarity=0.221 Sum_probs=155.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|+||||+ +++|.+++......+++.+++.++.||++||+|||++||+|+||||
T Consensus 55 ~l~~~~h~~i~~~~~-~~~~--~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p 130 (298)
T cd07841 55 LLQELKHPNIIGLLD-VFGH--KSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKP 130 (298)
T ss_pred HHhhcCCCCChhhhh-eeec--CCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCh
Confidence 344556888877776 4443 45689999999 9999999966544789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||+++.......
T Consensus 131 ~nill~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 157 (298)
T cd07841 131 NNLLIASDGVLKLADFGLARSFGSPNR----------------------------------------------------- 157 (298)
T ss_pred hhEEEcCCCCEEEccceeeeeccCCCc-----------------------------------------------------
Confidence 999999999999999999866422100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+ ..++.++|||||||++|||++
T Consensus 158 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~ 200 (298)
T cd07841 158 -------------------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRV 200 (298)
T ss_pred -------------------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 0011256788999999865 457999999999999999999
Q ss_pred CCCCChhhHhHHhhhccc----------------------CCC-----chhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 268 PFSTGEEKTRTMSSLRHR----------------------VLP-----PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~----------------------~~~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
|++...........+... ..+ ..+...+..+.++|.+||.++|.+|||+.|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l 280 (298)
T cd07841 201 PFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQAL 280 (298)
T ss_pred ccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 443333222211111100 000 01123356788999999999999999999999
Q ss_pred hcccccCCcCc
Q 002801 321 QSEFLNEPRDS 331 (879)
Q Consensus 321 ~hp~~~~~~~~ 331 (879)
+||||.+...+
T Consensus 281 ~~~~~~~~~~~ 291 (298)
T cd07841 281 EHPYFSNDPAP 291 (298)
T ss_pred hCccccCCCCC
Confidence 99999975543
No 254
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.95 E-value=2.9e-28 Score=262.02 Aligned_cols=198 Identities=15% Similarity=0.083 Sum_probs=154.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ ++. ....+++|||+.+++|.+++....+.+++..++.++.||+.||+|||++||+||||||
T Consensus 62 ~l~~l~h~~iv~~~~-~~~---~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp 137 (279)
T cd05111 62 AMGSLDHAYIVRLLG-ICP---GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAA 137 (279)
T ss_pred HHhcCCCCCcceEEE-EEC---CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCc
Confidence 446678898888776 443 2357899999999999999976656799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+|++|||+++........
T Consensus 138 ~nili~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------------------- 165 (279)
T cd05111 138 RNILLKSDSIVQIADFGVADLLYPDDKK---------------------------------------------------- 165 (279)
T ss_pred ceEEEcCCCcEEEcCCccceeccCCCcc----------------------------------------------------
Confidence 9999999999999999998653211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 ------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~ 209 (279)
T cd05111 166 ------------------------------------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGA 209 (279)
T ss_pred ------------------------------------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCC
Confidence 00011345778999999998889999999999999999997
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....++....+...+..++.+||..+|++|||+.|+++
T Consensus 210 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 210 EPYAGMRP-HEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CCCCCCCH-HHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6644332 2222333333333333345567889999999999999999999865
No 255
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.95 E-value=3.7e-28 Score=268.11 Aligned_cols=197 Identities=18% Similarity=0.196 Sum_probs=151.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------------------------------
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------------------------------------- 76 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------------------------------------- 76 (879)
+|++++..++ .|.. .....|++|||+.+++|.++|....
T Consensus 69 ~h~niv~~~~-~~~~-~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (337)
T cd05054 69 HHLNVVNLLG-ACTK-PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSG 146 (337)
T ss_pred cCcchhheee-eEec-CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccc
Confidence 6778877766 5543 3446789999999999999984321
Q ss_pred ---------------------CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCC
Q 002801 77 ---------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD 135 (879)
Q Consensus 77 ---------------------~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~ 135 (879)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~ 226 (337)
T cd05054 147 FIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD 226 (337)
T ss_pred cccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccC
Confidence 25789999999999999999999999999999999999999999999999999764211
Q ss_pred CcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccch
Q 002801 136 SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 215 (879)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 215 (879)
...
T Consensus 227 ~~~----------------------------------------------------------------------------- 229 (337)
T cd05054 227 PDY----------------------------------------------------------------------------- 229 (337)
T ss_pred cch-----------------------------------------------------------------------------
Confidence 000
Q ss_pred hhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchh
Q 002801 216 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQL 291 (879)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~ 291 (879)
.......++..|+|||++.+..++.++|||||||+||||++ ||............+.....+...
T Consensus 230 -----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 298 (337)
T cd05054 230 -----------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAP 298 (337)
T ss_pred -----------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCC
Confidence 00012345677999999999999999999999999999986 665433333333333333333333
Q ss_pred hccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 292 LLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 292 ~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
....+.+.+++.+||+.+|++||++.|+++|
T Consensus 299 ~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 299 EYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 4556788999999999999999999999874
No 256
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.95 E-value=2.1e-28 Score=263.64 Aligned_cols=200 Identities=19% Similarity=0.183 Sum_probs=157.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------CCCChhHHHHHHHHHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIV 95 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l 95 (879)
.+....|++++..++ .+.+ ....|++|||+++++|.+++.... ..+++.+++.++.||+.||
T Consensus 61 ~l~~l~h~~i~~~~~-~~~~--~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al 137 (283)
T cd05048 61 LMSDLQHPNIVCLLG-VCTK--EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGM 137 (283)
T ss_pred HHHhcCCcccceEEE-EEcC--CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence 345567788877666 4433 345799999999999999995421 4578899999999999999
Q ss_pred HhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcccccccccc
Q 002801 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (879)
Q Consensus 96 ~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (879)
.|||++||+|+||||+||+++.++.+||+|||+++........
T Consensus 138 ~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~------------------------------------- 180 (283)
T cd05048 138 EYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYY------------------------------------- 180 (283)
T ss_pred HHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccc-------------------------------------
Confidence 9999999999999999999999999999999998653111000
Q ss_pred CCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcc
Q 002801 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (879)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (879)
.......+++.|+|||.+.+..++.++||
T Consensus 181 ---------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDv 209 (283)
T cd05048 181 ---------------------------------------------------RVQSKSLLPVRWMPPEAILYGKFTTESDI 209 (283)
T ss_pred ---------------------------------------------------cccCCCcccccccCHHHhccCcCchhhhH
Confidence 00011356788999999988889999999
Q ss_pred hhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 256 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 256 wSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|||||+||||++ ||..... ...+..+.....++.....++.+.+|+.+||..||.+||++.+++++
T Consensus 210 ~slG~il~el~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 210 WSFGVVLWEIFSYGLQPYYGFSN-QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999996 7755433 33444555555555556677899999999999999999999999874
No 257
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.95 E-value=5.6e-28 Score=259.86 Aligned_cols=203 Identities=17% Similarity=0.163 Sum_probs=155.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....+++|||+++++|..+. .+++..+..++.||+.||+|||+.||+|+||||
T Consensus 52 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp 123 (279)
T cd06619 52 ILYKCDSPYIIGFYG-AFFV--ENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKP 123 (279)
T ss_pred HHHhCCCCCeeeEEE-EEEE--CCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCH
Confidence 345567888888777 4433 34679999999999997653 468899999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.++++|||++......
T Consensus 124 ~Nill~~~~~~~l~dfg~~~~~~~~------------------------------------------------------- 148 (279)
T cd06619 124 SNMLVNTRGQVKLCDFGVSTQLVNS------------------------------------------------------- 148 (279)
T ss_pred HHEEECCCCCEEEeeCCcceecccc-------------------------------------------------------
Confidence 9999999999999999998653111
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.....+||..|+|||.+.+..++.++|||||||++|||++
T Consensus 149 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~ 191 (279)
T cd06619 149 -------------------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRF 191 (279)
T ss_pred -------------------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCC
Confidence 0012478899999999998889999999999999999998
Q ss_pred CCCCChhhH------hHHhhhcccCCCc-hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchH
Q 002801 268 PFSTGEEKT------RTMSSLRHRVLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 268 pf~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
||....... .....+.....+. .....++.+.+++.+||+.+|.+||+++++++||||........
T Consensus 192 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~ 264 (279)
T cd06619 192 PYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA 264 (279)
T ss_pred CchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence 774322111 1111111111111 11234577899999999999999999999999999987644433
No 258
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.95 E-value=4.4e-28 Score=258.04 Aligned_cols=202 Identities=17% Similarity=0.166 Sum_probs=158.8
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+. .....|++|||++|++|.+++.+. ..+++..+..++.||+.||.|||++|++|+||||+
T Consensus 47 l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~ 122 (262)
T cd05572 47 LEECNHPFIVKLYR-TFK--DKKYIYMLMEYCLGGELWTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPE 122 (262)
T ss_pred HHhCCCCCEeeeee-eEE--cCCccEEEEecCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHH
Confidence 44557888877766 333 334689999999999999999654 45899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++++|||.++......
T Consensus 123 nilv~~~~~~~l~df~~~~~~~~~~------------------------------------------------------- 147 (262)
T cd05572 123 NLLLDSNGYVKLVDFGFAKKLKSGQ------------------------------------------------------- 147 (262)
T ss_pred HEEEcCCCCEEEeeCCcccccCccc-------------------------------------------------------
Confidence 9999999999999999986532110
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
......|+..|+|||.+.+..++.++|||||||++|||++ |
T Consensus 148 ------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p 191 (262)
T cd05572 148 ------------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPP 191 (262)
T ss_pred ------------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCC
Confidence 0011367888999999988889999999999999999999 7
Q ss_pred CCCCh--hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCC
Q 002801 269 FSTGE--EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~ 328 (879)
|.... ..............++.+...++.+.+++.+||..+|.+||+ +.|+++||||++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 192 FGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred cCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 75544 222222222212222233334678999999999999999999 9999999999865
No 259
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.95 E-value=2.3e-28 Score=267.78 Aligned_cols=199 Identities=16% Similarity=0.111 Sum_probs=155.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|+|++..++ .|... ..++++||+.+|+|.+++.+....+++..++.++.||+.||+|||++||+||||||
T Consensus 62 ~l~~l~h~niv~~~g-~~~~~---~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp 137 (316)
T cd05108 62 VMASVDNPHVCRLLG-ICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAA 137 (316)
T ss_pred HHHhCCCCCCCeEEE-EEcCC---CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccch
Confidence 455567888888776 66543 57899999999999999977656789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.........
T Consensus 138 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~--------------------------------------------------- 166 (316)
T cd05108 138 RNVLVKTPQHVKITDFGLAKLLGADEKEY--------------------------------------------------- 166 (316)
T ss_pred hheEecCCCcEEEccccccccccCCCcce---------------------------------------------------
Confidence 99999999999999999997642210000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||++.+..++.++|||||||+||||++
T Consensus 167 -------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~ 209 (316)
T cd05108 167 -------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 209 (316)
T ss_pred -------------------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCC
Confidence 0001133667999999999899999999999999999986
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||... ........+.....++....+...+..++.+||..+|.+||++.+++.+
T Consensus 210 ~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 210 KPYDGI-PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CCCCCC-CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 65433 2223333334443444445566788999999999999999999999874
No 260
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95 E-value=1.7e-28 Score=264.56 Aligned_cols=201 Identities=16% Similarity=0.192 Sum_probs=151.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC--CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
.+...+|++++..++ .+.+ ....|+||||+. ++|.+++... ...+++..++.++.||+.||+|||++||+||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl 127 (285)
T cd07861 52 LLKELQHPNIVCLQD-VLMQ--ESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDL 127 (285)
T ss_pred HHHhcCCCCEeeeEE-EEee--CCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence 344456888877776 4443 346899999997 5898888442 256899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.+||+|||++...+.+..
T Consensus 128 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 156 (285)
T cd07861 128 KPQNLLIDNKGVIKLADFGLARAFGIPVR--------------------------------------------------- 156 (285)
T ss_pred CHHHEEEcCCCcEEECcccceeecCCCcc---------------------------------------------------
Confidence 99999999999999999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~ 267 (879)
......+++.|+|||.+.+. .++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t 197 (285)
T cd07861 157 ---------------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMAT 197 (285)
T ss_pred ---------------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHH
Confidence 00123668899999998764 47999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcc---------------------------cCCCchhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 ---PFSTGEEKTRTMSSLRH---------------------------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||............... ..........++++.++|.+||..||.+|||+.
T Consensus 198 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ 277 (285)
T cd07861 198 KKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAK 277 (285)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHH
Confidence 66543322222111110 000011223567788999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
+++.||||
T Consensus 278 ~ll~~~~~ 285 (285)
T cd07861 278 KALNHPYF 285 (285)
T ss_pred HHhcCCCC
Confidence 99999997
No 261
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=1.5e-28 Score=257.40 Aligned_cols=188 Identities=16% Similarity=0.098 Sum_probs=145.7
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
..|++++..+. .+.+ ....|++|||+.|++|.+++.+. ..+++.++..++.||+.||+|||++||+||||||+||+
T Consensus 42 ~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil 117 (237)
T cd05576 42 HCVPNMVCLHK-YIVS--EDSVFLVLQHAEGGKLWSHISKF-LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNIL 117 (237)
T ss_pred cCCCceeehhh-heec--CCeEEEEEecCCCCCHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEE
Confidence 35677776666 3332 34689999999999999999554 45899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.++++|||.+......
T Consensus 118 ~~~~~~~~l~df~~~~~~~~~----------------------------------------------------------- 138 (237)
T cd05576 118 LDDRGHIQLTYFSRWSEVEDS----------------------------------------------------------- 138 (237)
T ss_pred EcCCCCEEEecccchhccccc-----------------------------------------------------------
Confidence 999999999999987543110
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
.....++..|+|||.+.+..++.++||||+||++|||++ |+..
T Consensus 139 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 139 ----------------------------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred ----------------------------------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 001234667999999988889999999999999999998 3321
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH-----HHHhhcccc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFL 325 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~evl~hp~~ 325 (879)
.... . ............++.+.++|.+||+.||++||++ ++++.||||
T Consensus 185 ~~~~---~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 185 HPSG---I---NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred Cchh---c---ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 1110 0 0000011112345778999999999999999996 999999997
No 262
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.95 E-value=3.4e-28 Score=261.30 Aligned_cols=200 Identities=17% Similarity=0.151 Sum_probs=154.3
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
+.+|++++..+. .+.+ ....|+||||+.|++|.+++.+. ..+++.+++.|+.|++.||.|||++||+||||||+||
T Consensus 53 ~~~~~~i~~~~~-~~~~--~~~~~~v~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~ni 128 (278)
T cd05606 53 TGDCPFIVCMSY-AFHT--PDKLSFILDLMNGGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANI 128 (278)
T ss_pred hCCCCcEeeeee-eeec--CCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHE
Confidence 356777766555 3332 34689999999999999999654 5689999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
+++.++.+|++|||++......
T Consensus 129 li~~~~~~kl~dfg~~~~~~~~---------------------------------------------------------- 150 (278)
T cd05606 129 LLDEHGHVRISDLGLACDFSKK---------------------------------------------------------- 150 (278)
T ss_pred EECCCCCEEEccCcCccccCcc----------------------------------------------------------
Confidence 9999999999999998653110
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc---CC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PF 269 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~---pf 269 (879)
......|+..|+|||.+.+. .++.++||||+||++|||++ ||
T Consensus 151 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~ 196 (278)
T cd05606 151 ----------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 196 (278)
T ss_pred ----------------------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCC
Confidence 00113678899999999754 58999999999999999998 77
Q ss_pred CCChhhH-hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 270 STGEEKT-RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 270 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
....... ...........++.+...++.+.+++.+||..+|.+|| ++.++++||||....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 197 RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 5432111 11111111112222234568899999999999999999 999999999998754
No 263
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.95 E-value=5.3e-28 Score=261.69 Aligned_cols=199 Identities=14% Similarity=0.116 Sum_probs=151.1
Q ss_pred ccccCCCCCCcccccc---cccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 36 DHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~---~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
+|++++..++ ++... ....+|++|||++|++|.++++. ....+++..++.++.||+.||.|||++||+|||||
T Consensus 77 ~h~ni~~~~~-~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlk 155 (291)
T cd06639 77 NHPNVVKFYG-MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVK 155 (291)
T ss_pred CCCCeEEEEE-EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 5777776655 44322 23468999999999999998842 33568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++........
T Consensus 156 p~nili~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------------- 184 (291)
T cd06639 156 GNNILLTTEGGVKLVDFGVSAQLTSTRLR--------------------------------------------------- 184 (291)
T ss_pred HHHEEEcCCCCEEEeecccchhccccccc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-----CCCccCcchhHHHHHHH
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCASDIYRLGVLLFE 264 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~sDIwSlGvil~e 264 (879)
.....|+..|+|||.+... .++.++|||||||++||
T Consensus 185 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~e 225 (291)
T cd06639 185 ---------------------------------------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIE 225 (291)
T ss_pred ---------------------------------------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHH
Confidence 0113578889999998643 26899999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhcccCCCc--hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
|++ ||............ .....+. ........+.+||.+||..+|++||++.++++||||+
T Consensus 226 l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 226 LGDGDPPLFDMHPVKTLFKI-PRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HhhCCCCCCCCcHHHHHHHH-hcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 998 77554433333322 2221111 1223446788999999999999999999999999984
No 264
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=3.5e-26 Score=261.36 Aligned_cols=290 Identities=19% Similarity=0.313 Sum_probs=238.3
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe--CCCcEEEEecCcccCcCc----ccccceEE-eccCCCeeEEEEeCCCCCeEEEeeC
Q 002801 566 NSSNLVCSLSFDRDGELFAAAG--VNKKIKVFECDAIINENR----DIHYPVVE-MASRSKLSSICWNSYIKSQIASSNF 638 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~--~dg~I~iwd~~~~~~~~~----~~~~~~~~-~~~~~~i~~l~~~~~~~~~l~s~~~ 638 (879)
++...|.+|+.+|||..||||| .|+.+.||+.+....+.. ..+..+.. ..|.+.|+|+.|++ ++.+||+|+.
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~-dG~~lAsGSD 89 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSP-DGSYLASGSD 89 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECC-CCCeEeeccC
Confidence 4456799999999999999999 999999999887543221 12333333 35889999999999 4999999999
Q ss_pred CCcEEEEEcCC------------------CeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 002801 639 EGVVQVWDVSR------------------SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 700 (879)
Q Consensus 639 dg~V~vwd~~~------------------~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~ 700 (879)
|+.|.||.... .+++..+.+|...|..++|+| ++.+||++|.|++|.|||..+.+.+.++.
T Consensus 90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~vl~ 168 (942)
T KOG0973|consen 90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKVLR 168 (942)
T ss_pred cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC-CccEEEEecccceEEEEccccceeeeeee
Confidence 99999998762 236777889999999999999 99999999999999999999999998888
Q ss_pred c-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccC------CCCEEEEEEc-CCCEEEEEE----cCCc
Q 002801 701 T-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH------NKTVSYVKFV-DATTLVSAS----TDNT 768 (879)
Q Consensus 701 ~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h------~~~V~~v~fs-~~~~l~s~s----~D~~ 768 (879)
. .+.|-.+.|+|- |+|||+-+.|++|++|.+.+... .+.+.++ ..-+..+.|+ ||++|+++- .-.+
T Consensus 169 ~H~s~VKGvs~DP~-Gky~ASqsdDrtikvwrt~dw~i-~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~ 246 (942)
T KOG0973|consen 169 GHQSLVKGVSWDPI-GKYFASQSDDRTLKVWRTSDWGI-EKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKST 246 (942)
T ss_pred cccccccceEECCc-cCeeeeecCCceEEEEEccccee-eEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcce
Confidence 5 566999999999 99999999999999999877553 4444333 2357889999 999999864 2346
Q ss_pred EEEEecCCCcccccCCceEEEeCCCCcEEEEEEecC-----CC------------EEEEEeCCCcEEEEecCCCCCceec
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVW-----DG------------YVATGSETNEVFVYHKAFPMPALSF 831 (879)
Q Consensus 769 i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~-----~~------------~lasgs~Dg~v~vw~~~~~~~~~~~ 831 (879)
+.|.+-.+. +.-..|-||..++.++.|+|. .. .+|+||.|++|.||.....+|+...
T Consensus 247 ~~IieR~tW------k~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi 320 (942)
T KOG0973|consen 247 IAIIERGTW------KVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVI 320 (942)
T ss_pred eEEEecCCc------eeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhh
Confidence 778776554 556788999999999999982 11 6789999999999999999988765
Q ss_pred ccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 832 NFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 832 ~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
. . --...|..++|+|||- .|.+|+.||+|.++.+
T Consensus 321 ~-----~-------lf~~SI~DmsWspdG~-~LfacS~DGtV~~i~F 354 (942)
T KOG0973|consen 321 H-----N-------LFNKSIVDMSWSPDGF-SLFACSLDGTVALIHF 354 (942)
T ss_pred h-----h-------hhcCceeeeeEcCCCC-eEEEEecCCeEEEEEc
Confidence 4 1 1134699999999999 9999999999999864
No 265
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.95 E-value=6.2e-28 Score=260.42 Aligned_cols=198 Identities=15% Similarity=0.160 Sum_probs=149.8
Q ss_pred ccccCCCCCCccccc---ccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 36 DHLRNQGGLSGVCEN---EAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~---~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
+|++++..++ .+.. +....+|++|||++|++|.+++. .....+++..+..++.||+.||.|||+++|+|||||
T Consensus 73 ~h~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 151 (286)
T cd06638 73 DHPNVVKFYG-MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVK 151 (286)
T ss_pred cCCCeeeeee-eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 6788877666 3321 23446899999999999999874 233568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++.......
T Consensus 152 p~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 179 (286)
T cd06638 152 GNNILLTTEGGVKLVDFGVSAQLTSTRL---------------------------------------------------- 179 (286)
T ss_pred HHhEEECCCCCEEEccCCceeecccCCC----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHHH
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFE 264 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~e 264 (879)
......|++.|+|||.+.. ..++.++|||||||++||
T Consensus 180 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~e 221 (286)
T cd06638 180 --------------------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIE 221 (286)
T ss_pred --------------------------------------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHH
Confidence 0012367899999999853 447899999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhcccCCCc--hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
|++ ||........... ......+. ........+.+|+.+||+.||.+||++.|+++|+||
T Consensus 222 l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 222 LGDGDPPLADLHPMRALFK-IPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HhcCCCCCCCCchhHHHhh-ccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 998 6654433222222 22221111 111234678899999999999999999999999997
No 266
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.95 E-value=2.8e-28 Score=264.54 Aligned_cols=204 Identities=18% Similarity=0.263 Sum_probs=158.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+. .+...|++|||+++++|..++.. ..+++..++.++.||+.||+|||++||+||||||
T Consensus 71 ~l~~l~hp~i~~~~~-~~~--~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p 145 (297)
T cd06659 71 IMRDYQHQNVVEMYK-SYL--VGEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKS 145 (297)
T ss_pred HHHhCCCCchhhhhh-hee--eCCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 445567787777666 333 24568999999999999998854 3589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||+++.......
T Consensus 146 ~Nill~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------------- 172 (297)
T cd06659 146 DSILLTLDGRVKLSDFGFCAQISKDVP----------------------------------------------------- 172 (297)
T ss_pred HHeEEccCCcEEEeechhHhhcccccc-----------------------------------------------------
Confidence 999999999999999999865321100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 173 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 215 (297)
T cd06659 173 -------------------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEP 215 (297)
T ss_pred -------------------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 0012467899999999998889999999999999999998
Q ss_pred CCCCChhhHhHHhhhcccCC--CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 268 PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
||...... ..+..+..... .......++.+.+++.+||..+|.+||++.++++||||.....
T Consensus 216 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 216 PYFSDSPV-QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred CCCCCCHH-HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 77644332 22223322211 1222345567889999999999999999999999999986543
No 267
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95 E-value=1.1e-28 Score=262.20 Aligned_cols=201 Identities=24% Similarity=0.353 Sum_probs=153.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+..|++++..+. +..+ ....|++||++.+++|.++|. ....+++.+++.++.||++||++||++||+|+||||
T Consensus 51 ~~~~l~~~~i~~~~~-~~~~--~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp 126 (260)
T PF00069_consen 51 ILRRLRHPNIVQILD-VFQD--DNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKP 126 (260)
T ss_dssp HHHHHTBTTBCHEEE-EEEE--SSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSG
T ss_pred ccccccccccccccc-cccc--ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence 344456777776655 4433 556799999999999999996 235789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||.+........
T Consensus 127 ~NIl~~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------------- 153 (260)
T PF00069_consen 127 ENILLDENGEVKLIDFGSSVKLSENNE----------------------------------------------------- 153 (260)
T ss_dssp GGEEESTTSEEEESSGTTTEESTSTTS-----------------------------------------------------
T ss_pred ccccccccccccccccccccccccccc-----------------------------------------------------
Confidence 999999999999999999864200000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-CCCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......+|..|+|||++. +..++.++||||||+++|+|++
T Consensus 154 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~ 196 (260)
T PF00069_consen 154 -------------------------------------NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGK 196 (260)
T ss_dssp -------------------------------------EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------ccccccccccccccccccccccccccccccccccccccccccc
Confidence 012247799999999998 7779999999999999999999
Q ss_pred -CCCCCh--hhHhHHhhhcccCCCchhh---ccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGE--EKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||.... ..............+.... ...+.+.+++.+||+.||++||++.++++||||
T Consensus 197 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 197 LPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp SSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred cccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 776551 1122222111111111111 112678899999999999999999999999997
No 268
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.95 E-value=3.9e-28 Score=265.16 Aligned_cols=209 Identities=17% Similarity=0.178 Sum_probs=155.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.++.....|+||||+.+ +|.+++......+++.+++.++.||+.||.|||++||+||||||
T Consensus 59 ~l~~l~h~~i~~~~~-~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p 136 (309)
T cd07845 59 LLLNLRHPNIVELKE-VVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKV 136 (309)
T ss_pred HHHhCCCCCCcceEE-EEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 344567888777665 4444444567999999964 89998866556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||++........
T Consensus 137 ~nil~~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------------- 163 (309)
T cd07845 137 SNLLLTDKGCLKIADFGLARTYGLPAK----------------------------------------------------- 163 (309)
T ss_pred HHEEECCCCCEEECccceeeecCCccC-----------------------------------------------------
Confidence 999999999999999999866421100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~-- 267 (879)
..+...++..|+|||.+.+ ..++.++|||||||++|||++
T Consensus 164 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~ 206 (309)
T cd07845 164 -------------------------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206 (309)
T ss_pred -------------------------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCC
Confidence 0011245788999999876 448999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcc--------------------cCCCc--------hhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 -PFSTGEEKTRTMSSLRH--------------------RVLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~--------------------~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||............... ...+. .....++.+.+||.+||+.||++|||+.+
T Consensus 207 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~ 286 (309)
T cd07845 207 PLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEE 286 (309)
T ss_pred CCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHH
Confidence 66443332222111110 00000 01123567889999999999999999999
Q ss_pred HhhcccccCCcCc
Q 002801 319 LLQSEFLNEPRDS 331 (879)
Q Consensus 319 vl~hp~~~~~~~~ 331 (879)
+++||||.....+
T Consensus 287 il~h~~f~~~~~~ 299 (309)
T cd07845 287 ALESSYFKEKPLP 299 (309)
T ss_pred HhcChhhccCCCC
Confidence 9999999865444
No 269
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.95 E-value=5.3e-28 Score=257.11 Aligned_cols=197 Identities=15% Similarity=0.206 Sum_probs=155.5
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
..+|++++..++ .+. ....+|++|||+.|++|.++++.. ..+++..+..++.||+.||.|||+.||+|+||+|+||
T Consensus 53 ~~~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~ni 128 (260)
T cd05611 53 QGESPYVAKLYY-SFQ--SKDYLYLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENL 128 (260)
T ss_pred cCCCCCeeeeee-eEE--cCCeEEEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence 347788877776 443 244689999999999999999654 4689999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
+++.++.++++|||+++.....
T Consensus 129 l~~~~~~~~l~dfg~~~~~~~~---------------------------------------------------------- 150 (260)
T cd05611 129 LIDQTGHLKLTDFGLSRNGLEN---------------------------------------------------------- 150 (260)
T ss_pred EECCCCcEEEeecccceecccc----------------------------------------------------------
Confidence 9999999999999988542100
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
....|+..|+|||.+.+..++.++|||||||+||||++ ||.
T Consensus 151 ------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 194 (260)
T cd05611 151 ------------------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFH 194 (260)
T ss_pred ------------------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCC
Confidence 11356888999999988889999999999999999998 775
Q ss_pred CChhhHhHHhhhccc--CCC-chhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccccCCc
Q 002801 271 TGEEKTRTMSSLRHR--VLP-PQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~~~~~ 329 (879)
..... .....+... ..+ ......++.+.+++.+||..+|++||+ ++|++.||||....
T Consensus 195 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 195 AETPD-AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258 (260)
T ss_pred CCCHH-HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence 44332 222222211 112 222245678899999999999999995 47999999997653
No 270
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.95 E-value=6.1e-26 Score=257.71 Aligned_cols=271 Identities=23% Similarity=0.319 Sum_probs=236.1
Q ss_pred CCceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceE
Q 002801 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (879)
Q Consensus 533 ~~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~ 612 (879)
.+.+++++.+.++++|+..++..... .+.||.+.|.+++|..-+.++++|+.|++++|||+.++... ..
T Consensus 218 ~~~~~~~s~~~tl~~~~~~~~~~i~~----~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~-------~~ 286 (537)
T KOG0274|consen 218 DGFFKSGSDDSTLHLWDLNNGYLILT----RLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECT-------HS 286 (537)
T ss_pred cCeEEecCCCceeEEeecccceEEEe----eccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEE-------EE
Confidence 34568999999999999998877755 23499999999999887889999999999999998875442 23
Q ss_pred EeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 002801 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (879)
Q Consensus 613 ~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~ 692 (879)
...|.+.|.|+... +..+++|+.|.+|++|++++++++..+.+|..+|.+|.++ +.++++|+.|++|++||+.+
T Consensus 287 l~gh~stv~~~~~~---~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~ 360 (537)
T KOG0274|consen 287 LQGHTSSVRCLTID---PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRT 360 (537)
T ss_pred ecCCCceEEEEEcc---CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhh
Confidence 34688999999875 5678889999999999999999999999999999999996 68999999999999999999
Q ss_pred CceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEE
Q 002801 693 GVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKL 771 (879)
Q Consensus 693 ~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~l 771 (879)
++++.++.. ...|.++.+.+. ..+++|+.|++|++||+++...++.++.+|...|+.+.+ .++.|++++.|++|++
T Consensus 361 ~~cl~sl~gH~~~V~sl~~~~~--~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~-~~~~Lvs~~aD~~Ik~ 437 (537)
T KOG0274|consen 361 GKCLKSLSGHTGRVYSLIVDSE--NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL-RDNFLVSSSADGTIKL 437 (537)
T ss_pred ceeeeeecCCcceEEEEEecCc--ceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc-ccceeEeccccccEEE
Confidence 999999985 566999988753 689999999999999999993369999999999877665 5889999999999999
Q ss_pred EecCCCcccccCCceEEEeC-CCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceec
Q 002801 772 WDLSMCTSRVIDTPLHSFTG-HTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSF 831 (879)
Q Consensus 772 wd~~~~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~ 831 (879)
||...+ .+++.+.+ |...|.++++. ...+++++.|+++++||+..++....+
T Consensus 438 WD~~~~------~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 438 WDAEEG------ECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred eecccC------ceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence 999987 78899988 67888888876 568999999999999999998877755
No 271
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.95 E-value=3.3e-28 Score=265.57 Aligned_cols=201 Identities=19% Similarity=0.184 Sum_probs=154.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlK 109 (879)
.+.+..|++++..++ .+.+ ...+|++|||++|++|.+++++. ..+++..+..++.||+.||+|||+ .||+|||||
T Consensus 52 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~ 127 (308)
T cd06615 52 VLHECNSPYIVGFYG-AFYS--DGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRDVK 127 (308)
T ss_pred HHHhCCCCCCCeEEE-EEee--CCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCC
Confidence 445567888888776 4443 34689999999999999999655 568999999999999999999998 599999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+|++|||++......
T Consensus 128 p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------------------ 153 (308)
T cd06615 128 PSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------------ 153 (308)
T ss_pred hHHEEEecCCcEEEccCCCccccccc------------------------------------------------------
Confidence 99999999999999999988542100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 154 --------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 195 (308)
T cd06615 154 --------------------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195 (308)
T ss_pred --------------------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCC
Confidence 0012367889999999988889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhccc-----------------------------------CCCchh--hccChhhHHHHHHhcCCC
Q 002801 268 -PFSTGEEKTRTMSSLRHR-----------------------------------VLPPQL--LLKFPKEASFCLWLLHPE 309 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~-----------------------------------~~~~~~--~~~~~~~~~li~~~L~~d 309 (879)
||..... ......+... ..++.. ...++.+.+|+.+||..+
T Consensus 196 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 274 (308)
T cd06615 196 YPIPPPDA-KELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKN 274 (308)
T ss_pred CCCCCcch-hhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCC
Confidence 6643321 1111111000 000000 123567889999999999
Q ss_pred CCCCCCHHHHhhcccccCC
Q 002801 310 PSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 310 P~~Rpt~~evl~hp~~~~~ 328 (879)
|++||++.++++||||...
T Consensus 275 P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 275 PKERADLKELTKHPFIKRA 293 (308)
T ss_pred hhhCcCHHHHhcChhhhhc
Confidence 9999999999999999753
No 272
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-29 Score=265.45 Aligned_cols=234 Identities=18% Similarity=0.189 Sum_probs=184.0
Q ss_pred cccccccccCCCCC------cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCC
Q 002801 7 RGERFGVRGDDSND------FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 80 (879)
Q Consensus 7 ~~~~~~~~~~~~~~------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~ 80 (879)
.|..++++--+..+ +..|.|... +-...||-+|.+-+ -.|.....|+|||-+.|.-|.=.|....+.|+
T Consensus 588 tGrdVAvKvIdKlrFp~kqesqlR~EVaI--Lq~l~HPGiV~le~---M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~ 662 (888)
T KOG4236|consen 588 TGRDVAVKVIDKLRFPTKQESQLRNEVAI--LQNLHHPGIVNLEC---MFETPERVFVVMEKLHGDMLEMILSSEKGRLP 662 (888)
T ss_pred cCceeeeeeeecccCCCchHHHHHHHHHH--HHhcCCCCeeEEEE---eecCCceEEEEehhhcchHHHHHHHhhcccch
Confidence 35556665443332 333544443 33455666655444 34566788999999966555555666678899
Q ss_pred hhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeec---cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcc
Q 002801 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (879)
Q Consensus 81 ~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (879)
+...+.++.||+.||.|||-++|||+||||+||||. +.-++||||||.|+.++..+..
T Consensus 663 er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR------------------- 723 (888)
T KOG4236|consen 663 ERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR------------------- 723 (888)
T ss_pred HHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh-------------------
Confidence 999999999999999999999999999999999995 4568999999999886443211
Q ss_pred hhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccc
Q 002801 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (879)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (879)
...+|||.
T Consensus 724 ------------------------------------------------------------------------rsVVGTPA 731 (888)
T KOG4236|consen 724 ------------------------------------------------------------------------RSVVGTPA 731 (888)
T ss_pred ------------------------------------------------------------------------hhhcCCcc
Confidence 33699999
Q ss_pred eeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC
Q 002801 238 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314 (879)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (879)
|.|||+++...|+.+-|+||.|||+|--|. ||...++....+....--..|..|.+.++.+.+||..+|+..-.+|-
T Consensus 732 YLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRy 811 (888)
T KOG4236|consen 732 YLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRY 811 (888)
T ss_pred ccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998887 88776666666665555566778889999999999999999999999
Q ss_pred CHHHHhhcccccCCcCchHHHH
Q 002801 315 KMGELLQSEFLNEPRDSMEERE 336 (879)
Q Consensus 315 t~~evl~hp~~~~~~~~~~e~~ 336 (879)
+.++.|.|||++..+.-+..++
T Consensus 812 svdk~lsh~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 812 SVDKSLSHPWLQDYQTWLDLRE 833 (888)
T ss_pred chHhhccchhhhcchHHHHHHH
Confidence 9999999999998766555443
No 273
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.95 E-value=4.7e-28 Score=257.61 Aligned_cols=201 Identities=16% Similarity=0.173 Sum_probs=156.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ... ....+|++|||+.+++|.+++......+++.+++.++.|++.||.|||++||+|+||||
T Consensus 53 ~l~~~~h~~i~~~~~-~~~--~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p 129 (262)
T cd06613 53 MLKECRHPNIVAYFG-SYL--RRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKG 129 (262)
T ss_pred HHHhCCCCChhceEE-EEE--eCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCh
Confidence 455668888888776 333 24468999999999999999976656799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||++........
T Consensus 130 ~ni~i~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------------- 156 (262)
T cd06613 130 ANILLTEDGDVKLADFGVSAQLTATIA----------------------------------------------------- 156 (262)
T ss_pred hhEEECCCCCEEECccccchhhhhhhh-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC---CCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvil~ell~ 267 (879)
......|+..|+|||.+.+. .++.++|||||||++|||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~t 199 (262)
T cd06613 157 -------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAE 199 (262)
T ss_pred -------------------------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHh
Confidence 00124678899999999877 78999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCc---hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPP---QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
||..................++ .....+..+.+++.+||..+|..|||+.+++.|+|
T Consensus 200 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 200 LQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred CCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 6654433222222212211111 12233467889999999999999999999999998
No 274
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.95 E-value=7.4e-28 Score=260.46 Aligned_cols=200 Identities=16% Similarity=0.108 Sum_probs=159.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+..|++++..++ .+. ....+|++|||+.+++|.+++.+. ..+++..+..++.||+.||.|||++||+|+||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~--~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p 129 (290)
T cd05580 54 ILQSIRHPFLVNLYG-SFQ--DDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKP 129 (290)
T ss_pred HHHhCCCCCccceee-EEE--cCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence 345556888887766 333 344689999999999999999665 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||+++.....
T Consensus 130 ~nili~~~~~~kl~dfg~~~~~~~~------------------------------------------------------- 154 (290)
T cd05580 130 ENLLLDSDGYIKITDFGFAKRVKGR------------------------------------------------------- 154 (290)
T ss_pred HHEEECCCCCEEEeeCCCccccCCC-------------------------------------------------------
Confidence 9999999999999999998653111
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.....|++.|+|||.+.+..++.++|||||||++|+|++
T Consensus 155 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 196 (290)
T cd05580 155 --------------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYP 196 (290)
T ss_pred --------------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence 011367889999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||............. ... ++.....++.+.+++.+||..||.+|+ +++++++||||....
T Consensus 197 p~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 197 PFFDDNPIQIYEKIL-EGK-VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred CCCCCCHHHHHHHHh-cCC-ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 775544322222222 221 222234467889999999999999999 899999999998654
No 275
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=2.3e-28 Score=283.06 Aligned_cols=208 Identities=15% Similarity=0.184 Sum_probs=150.5
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC----CCCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
+...+.+.+|+|++..++ ++.+ ....|++|+++ +++|.+++... .......+++.|+.||+.||+|||++||
T Consensus 213 Ei~il~~l~HpnIv~l~~-~~~~--~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gI 288 (501)
T PHA03210 213 EILALGRLNHENILKIEE-ILRS--EANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKL 288 (501)
T ss_pred HHHHHHhCCCCCcCcEeE-EEEE--CCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence 344556678999988777 5543 34579999998 45777776322 1223466788999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
|||||||+||||+.++.+||+|||+++.+......
T Consensus 289 iHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------------------- 323 (501)
T PHA03210 289 IHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA--------------------------------------------- 323 (501)
T ss_pred ecCCCCHHHEEECCCCCEEEEeCCCceecCccccc---------------------------------------------
Confidence 99999999999999999999999999764211000
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
.....+||..|+|||++.+..++.++|||||||+||
T Consensus 324 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 324 --------------------------------------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred --------------------------------------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 001247899999999999999999999999999999
Q ss_pred Hhhc----CCCCCh--hhHhHHhhhcc-----cCCC-----------------------chh--hccChhhHHHHHHhcC
Q 002801 264 ELFC----PFSTGE--EKTRTMSSLRH-----RVLP-----------------------PQL--LLKFPKEASFCLWLLH 307 (879)
Q Consensus 264 ell~----pf~~~~--~~~~~~~~~~~-----~~~~-----------------------~~~--~~~~~~~~~li~~~L~ 307 (879)
||++ |+.... ........+.. ..++ +.. ......+.++|.+||.
T Consensus 360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~ 439 (501)
T PHA03210 360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT 439 (501)
T ss_pred HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence 9998 332211 11111111110 0000 000 1123456788999999
Q ss_pred CCCCCCCCHHHHhhcccccCC
Q 002801 308 PEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 308 ~dP~~Rpt~~evl~hp~~~~~ 328 (879)
.||.+|||+.|+|.||||...
T Consensus 440 ~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 440 FDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred cCcccCcCHHHHhhChhhhcC
Confidence 999999999999999999753
No 276
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.95 E-value=5.5e-28 Score=257.48 Aligned_cols=197 Identities=17% Similarity=0.144 Sum_probs=152.8
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+...+|++++..++ .|.. ....|++|||+++++|.+++... ...+++..++.++.|++.||.|||++||+||||||
T Consensus 56 l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp 132 (263)
T cd05052 56 MKEIKHPNLVQLLG-VCTR--EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 132 (263)
T ss_pred HHhCCCCChhheEE-EEcC--CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCc
Confidence 34457788877776 4443 34679999999999999999543 34689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++........
T Consensus 133 ~nil~~~~~~~kl~df~~~~~~~~~~~~---------------------------------------------------- 160 (263)
T cd05052 133 RNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------------- 160 (263)
T ss_pred ceEEEcCCCcEEeCCCccccccccceee----------------------------------------------------
Confidence 9999999999999999998653211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 161 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~ 203 (263)
T cd05052 161 -------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 203 (263)
T ss_pred -------------------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCC
Confidence 0001133567999999988889999999999999999996
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||... ........+.....++.....++.+.+++.+||..+|++||++.++++
T Consensus 204 ~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 204 SPYPGI-DLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred CCCCCC-CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 55433 333333444444344444556788999999999999999999999976
No 277
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.95 E-value=3.7e-28 Score=257.70 Aligned_cols=195 Identities=15% Similarity=0.107 Sum_probs=149.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+....|++++..++ .+. +.....|++|||+++++|.+++++.. ..+++..++.++.||+.||+|||++||+|||||
T Consensus 52 ~l~~l~~~~i~~~~~-~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 129 (256)
T cd05082 52 VMTQLRHSNLVQLLG-VIV-EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLA 129 (256)
T ss_pred HHHhCCCCCeeeEEE-EEE-cCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccc
Confidence 344557777777665 322 23346799999999999999996543 347899999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++......
T Consensus 130 p~nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------------------- 156 (256)
T cd05082 130 ARNVLVSEDNVAKVSDFGLTKEASSTQ----------------------------------------------------- 156 (256)
T ss_pred hheEEEcCCCcEEecCCccceeccccC-----------------------------------------------------
Confidence 999999999999999999986431100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
....++..|+|||++.+..++.++|||||||++|||++
T Consensus 157 ----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g 196 (256)
T cd05082 157 ----------------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 196 (256)
T ss_pred ----------------------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCC
Confidence 01123557999999988889999999999999999986
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....+......++.+.+++.+||..+|++|||+.++++
T Consensus 197 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 197 RVPYPRIPL-KDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred CCCCCCCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 6644322 2233333333333333456678899999999999999999999975
No 278
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=2.8e-26 Score=238.86 Aligned_cols=290 Identities=18% Similarity=0.261 Sum_probs=232.5
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCccc--------c-cceEE--eccCCCeeEEEEeCCCCCeEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI--------H-YPVVE--MASRSKLSSICWNSYIKSQIA 634 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~--------~-~~~~~--~~~~~~i~~l~~~~~~~~~l~ 634 (879)
.|.-.|++++++||+++.++++.+++|.=|++.++....... + .+... -.|...+.+++.++ ++.+|+
T Consensus 140 ~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~-Dgkyla 218 (479)
T KOG0299|consen 140 KHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSS-DGKYLA 218 (479)
T ss_pred cccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcC-CCcEEE
Confidence 677899999999999999999999999999998754331111 1 11111 25778899999998 599999
Q ss_pred EeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCC
Q 002801 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLD 713 (879)
Q Consensus 635 s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~ 713 (879)
+|+.|..|.|||..+.+.+..+.+|.+.|.+++|-. ..+.+.+++.|.+|++|++.....+.++. |++.|..|.-..-
T Consensus 219 tgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~r 297 (479)
T KOG0299|consen 219 TGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRK-GTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSR 297 (479)
T ss_pred ecCCCceEEEecCcccchhhcccccccceeeeeeec-CccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcc
Confidence 999999999999999999999999999999999987 78899999999999999999887776665 5677988887766
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEe-C-
Q 002801 714 SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT-G- 791 (879)
Q Consensus 714 ~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~-~- 791 (879)
.+.+.+|+.|.++++|++.... ...|.+|.+.+-|++|.+...++|||.+|.|.+|++... +|+.+.. .
T Consensus 298 -eR~vtVGgrDrT~rlwKi~ees--qlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KK------kplf~~~~AH 368 (479)
T KOG0299|consen 298 -ERCVTVGGRDRTVRLWKIPEES--QLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKK------KPLFTSRLAH 368 (479)
T ss_pred -cceEEeccccceeEEEeccccc--eeeeeCCCCCeeeEEEecccceeeccCCceEEEeeeccc------CceeEeeccc
Confidence 7788888899999999995444 567889999999999999999999999999999999886 4444332 1
Q ss_pred ----------CCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCC
Q 002801 792 ----------HTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSS 861 (879)
Q Consensus 792 ----------h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 861 (879)
+..+|++|+..|...++|+||.+|.|++|-+..+-....+-+. -.-.++|++++|+++|.
T Consensus 369 gv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~----------ls~~GfVNsl~f~~sgk 438 (479)
T KOG0299|consen 369 GVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYS----------LSLVGFVNSLAFSNSGK 438 (479)
T ss_pred cccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeee----------cccccEEEEEEEccCCC
Confidence 2238999999999999999999999999999876321111100 11267899999999999
Q ss_pred cEEEEEeCCCcEEEE
Q 002801 862 NTLVAANSSGNIKIL 876 (879)
Q Consensus 862 ~~l~s~~~Dg~I~vw 876 (879)
..+|.+|....+--|
T Consensus 439 ~ivagiGkEhRlGRW 453 (479)
T KOG0299|consen 439 RIVAGIGKEHRLGRW 453 (479)
T ss_pred EEEEeccccccccee
Confidence 344444444433333
No 279
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=9.4e-28 Score=259.06 Aligned_cols=206 Identities=14% Similarity=0.137 Sum_probs=159.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC--CCCCChhHHHHHHHHHHHHHHhhhh-cCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrD 107 (879)
.+...+|++++..++ .+.. ....|++|||++|++|.+++... ...+++..++.++.||+.||.|||+ .||+|+|
T Consensus 52 ~l~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~d 128 (286)
T cd06622 52 ILHKAVSPYIVDFYG-AFFI--EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRD 128 (286)
T ss_pred HHHhcCCCcHHhhhh-heec--CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCC
Confidence 345567888877776 3332 45789999999999999998653 2368999999999999999999997 5999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.+|++|||++.......
T Consensus 129 l~p~nil~~~~~~~~l~dfg~~~~~~~~~--------------------------------------------------- 157 (286)
T cd06622 129 VKPTNVLVNGNGQVKLCDFGVSGNLVASL--------------------------------------------------- 157 (286)
T ss_pred CCHHHEEECCCCCEEEeecCCcccccCCc---------------------------------------------------
Confidence 99999999999999999999986531110
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC------CCCccCcchhHHHH
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------PVSCASDIYRLGVL 261 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~~~~sDIwSlGvi 261 (879)
.....|++.|+|||.+.+. .++.++|||||||+
T Consensus 158 -----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i 196 (286)
T cd06622 158 -----------------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLS 196 (286)
T ss_pred -----------------------------------------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHH
Confidence 0112567889999998653 35889999999999
Q ss_pred HHHhhc---CCCCChhhH--hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 262 LFELFC---PFSTGEEKT--RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 262 l~ell~---pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
+|||++ ||....... ..+..+.....+..+...++.+.+|+.+||..+|.+||++.++++||||......
T Consensus 197 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 197 ILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred HHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 999999 775433222 1222333333444444567889999999999999999999999999999765433
No 280
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.95 E-value=4.4e-28 Score=259.65 Aligned_cols=199 Identities=16% Similarity=0.150 Sum_probs=151.4
Q ss_pred ccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCC---CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 36 DHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
+|++++..++ .+.+.. ....|++|||+++++|.+++... +..+++..++.++.|++.||.|||++||+|+||
T Consensus 61 ~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l 139 (275)
T cd06608 61 NHPNIATFYG-AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDI 139 (275)
T ss_pred CCCChheEEE-EEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 6788877666 443322 44579999999999999998542 357899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
+|+||+++.++.+|++|||++........
T Consensus 140 ~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------------- 168 (275)
T cd06608 140 KGQNILLTKNAEVKLVDFGVSAQLDSTLG--------------------------------------------------- 168 (275)
T ss_pred CHHHEEEccCCeEEECCCccceecccchh---------------------------------------------------
Confidence 99999999999999999999865311100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHH
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLF 263 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~ 263 (879)
......|+..|+|||.+.. ..++.++|||||||+||
T Consensus 169 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~ 209 (275)
T cd06608 169 ---------------------------------------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAI 209 (275)
T ss_pred ---------------------------------------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHH
Confidence 0012367889999998854 23788999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhcccCCC-chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 264 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||++ ||................... ......+..+.+|+.+||..||.+|||+.++++|||+
T Consensus 210 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 210 ELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 9999 775443333333322221111 1112245678899999999999999999999999996
No 281
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.95 E-value=4.4e-28 Score=258.99 Aligned_cols=202 Identities=18% Similarity=0.174 Sum_probs=153.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCC--ChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV--DVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l--~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
.+....|++++..++ .+.+ ....|++|||+.|++|.+++......+ ++..++.++.||+.||+|||++||+||||
T Consensus 58 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl 134 (268)
T cd06624 58 LHSYLKHRNIVQYLG-SDSE--NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDI 134 (268)
T ss_pred HHHhcCCCCeeeeee-eecc--CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence 345567888877666 4433 346899999999999999996544455 88899999999999999999999999999
Q ss_pred CCcceeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 109 RPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 109 KP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||+||+++. .+.++++|||++........
T Consensus 135 ~p~nil~~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 164 (268)
T cd06624 135 KGDNVLVNTYSGVVKISDFGTSKRLAGINP-------------------------------------------------- 164 (268)
T ss_pred CHHHEEEcCCCCeEEEecchhheecccCCC--------------------------------------------------
Confidence 999999976 67999999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC--CCccCcchhHHHHHHHh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFEL 265 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvil~el 265 (879)
......|++.|+|||.+.+.. ++.++|||||||++|||
T Consensus 165 ----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l 204 (268)
T cd06624 165 ----------------------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEM 204 (268)
T ss_pred ----------------------------------------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHH
Confidence 001125688899999987654 78999999999999999
Q ss_pred hc---CCCCChhhHhHHhhh-cccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 266 FC---PFSTGEEKTRTMSSL-RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
++ ||.........+... .....+.......+.+.+|+.+||..+|.+|||+.++++||||
T Consensus 205 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 205 ATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 99 665433222222211 1122233334456788999999999999999999999999997
No 282
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.95 E-value=2.4e-28 Score=270.18 Aligned_cols=213 Identities=17% Similarity=0.219 Sum_probs=156.4
Q ss_pred CceeecccccccCCCCCCcccccc---cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
+...+...+|++++..++ ++... .....|++|||+. ++|.++++.. +.+++..+..++.||+.||.|||++||+
T Consensus 54 E~~~l~~l~h~ni~~~~~-~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~ 130 (337)
T cd07858 54 EIKLLRHLDHENVIAIKD-IMPPPHREAFNDVYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSANVL 130 (337)
T ss_pred HHHHHHhcCCCCccchHH-heecccccccCcEEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 333455567888877665 44322 1235799999995 6899998654 5799999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+||+++.++.+||+|||+++...... .
T Consensus 131 H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~---------------------------------------------- 163 (337)
T cd07858 131 HRDLKPSNLLLNANCDLKICDFGLARTTSEKG-D---------------------------------------------- 163 (337)
T ss_pred cCCCCHHHEEEcCCCCEEECcCccccccCCCc-c----------------------------------------------
Confidence 99999999999999999999999986532110 0
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ 263 (879)
......++.+|+|||.+.. ..++.++|||||||++|
T Consensus 164 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 200 (337)
T cd07858 164 -------------------------------------------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFA 200 (337)
T ss_pred -------------------------------------------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHH
Confidence 0012367889999998865 45899999999999999
Q ss_pred Hhhc---CCCCChhhHhH--Hhh------------------------hcccCC---CchhhccChhhHHHHHHhcCCCCC
Q 002801 264 ELFC---PFSTGEEKTRT--MSS------------------------LRHRVL---PPQLLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 264 ell~---pf~~~~~~~~~--~~~------------------------~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~ 311 (879)
+|++ ||......... ... +..... .......++.+.+|+.+||+.+|+
T Consensus 201 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 280 (337)
T cd07858 201 ELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPS 280 (337)
T ss_pred HHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChh
Confidence 9998 56432211000 000 000000 011234567788999999999999
Q ss_pred CCCCHHHHhhcccccCCcCchH
Q 002801 312 GRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 312 ~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
+|||+.++++||||.....+..
T Consensus 281 ~Rps~~ell~h~~~~~~~~~~~ 302 (337)
T cd07858 281 KRITVEEALAHPYLASLHDPSD 302 (337)
T ss_pred hccCHHHHHcCcchhhhcCccc
Confidence 9999999999999987654443
No 283
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=2.9e-28 Score=260.26 Aligned_cols=201 Identities=15% Similarity=0.181 Sum_probs=153.2
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+...+|++++..++ .+.+ ....|++|||+++++|.+++... ..+++..+..++.|++.||+|||+.||+|||||
T Consensus 58 ~~l~~~~h~~ii~~~~-~~~~--~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 133 (267)
T cd06646 58 FMVKECKHCNIVAYFG-SYLS--REKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIK 133 (267)
T ss_pred HHHHhcCCCCeeeeeE-EEEe--CCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence 3455668888887776 4433 34679999999999999998544 468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++.......
T Consensus 134 p~nill~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 161 (267)
T cd06646 134 GANILLTDNGDVKLADFGVAAKITATIA---------------------------------------------------- 161 (267)
T ss_pred HHHEEECCCCCEEECcCccceeeccccc----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhh
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell 266 (879)
......|+..|+|||.+. ...++.++|||||||++|||+
T Consensus 162 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~ 203 (267)
T cd06646 162 --------------------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELA 203 (267)
T ss_pred --------------------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHH
Confidence 001236788999999885 344788999999999999999
Q ss_pred c---CCCCChhhHhHHhhhcccCCCchh---hccChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 267 C---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
+ ||..................++.+ ...+..+.+|+.+||..+|++||+++++++|+|
T Consensus 204 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 204 ELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred hCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 8 664433222211111111122221 234578889999999999999999999999987
No 284
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.95 E-value=5.1e-28 Score=256.84 Aligned_cols=199 Identities=13% Similarity=0.098 Sum_probs=154.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ +|.. ...|++|||+++++|.+++......+++..++.++.||+.||.|||++||+||||||
T Consensus 48 ~l~~l~h~~ii~~~~-~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp 123 (257)
T cd05115 48 IMHQLDNPYIVRMIG-VCEA---EALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAA 123 (257)
T ss_pred HHHhcCCCCeEEEEE-EEcC---CCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccch
Confidence 344567788877665 5542 357999999999999999965556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++.........
T Consensus 124 ~nil~~~~~~~kl~dfg~~~~~~~~~~~~--------------------------------------------------- 152 (257)
T cd05115 124 RNVLLVNQHYAKISDFGLSKALGADDSYY--------------------------------------------------- 152 (257)
T ss_pred heEEEcCCCcEEeccCCccccccCCccce---------------------------------------------------
Confidence 99999999999999999986532110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
...+...++..|+|||.+.+..++.++|||||||++|||++
T Consensus 153 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~ 196 (257)
T cd05115 153 ------------------------------------KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQ 196 (257)
T ss_pred ------------------------------------eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCC
Confidence 00011133567999999988889999999999999999985
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+.....++.....++++.+++.+||..+|++||++.++++
T Consensus 197 ~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 197 KPYKKMK-GPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred CCcCcCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 665433 33344444444444444566788999999999999999999999865
No 285
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.95 E-value=5.5e-28 Score=256.39 Aligned_cols=200 Identities=21% Similarity=0.188 Sum_probs=158.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||++|++|.+++.+. ..+++..+..++.||+.||.|||+.||+|+||||
T Consensus 55 ~l~~~~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~ 130 (258)
T cd06632 55 LLSKLQHPNIVQYLG-TERE--EDNLYIFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKG 130 (258)
T ss_pred HHHhcCCCCchheee-eEec--CCeEEEEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 445567888887666 4433 34689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||++.......
T Consensus 131 ~ni~~~~~~~~kl~d~~~~~~~~~~~------------------------------------------------------ 156 (258)
T cd06632 131 ANILVDTNGVVKLADFGMAKQVVEFS------------------------------------------------------ 156 (258)
T ss_pred HHEEECCCCCEEEccCccceeccccc------------------------------------------------------
Confidence 99999999999999999986531110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.... ++.++|+|||||++|+|++
T Consensus 157 -------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~ 199 (258)
T cd06632 157 -------------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK 199 (258)
T ss_pred -------------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 001236788999999997766 8999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..................+.......+.+.+++.+||..+|.+||++.+++.|||+
T Consensus 200 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 200 PPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred CCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 7755443333333222233334444566888999999999999999999999999996
No 286
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.95 E-value=9.6e-28 Score=253.83 Aligned_cols=199 Identities=15% Similarity=0.156 Sum_probs=152.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ +|.+ ....|+||||+.+++|.+++......+++.+++.++.||+.||.|||++||+||||||
T Consensus 46 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p 122 (252)
T cd05084 46 ILKQYSHPNIVRLIG-VCTQ--KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAA 122 (252)
T ss_pred HHHhCCCCCcceEEE-EEcC--CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence 344567888877666 5544 3468999999999999999966555689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++........
T Consensus 123 ~nil~~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------------------- 150 (252)
T cd05084 123 RNCLVTEKNVLKISDFGMSREEEDGVYA---------------------------------------------------- 150 (252)
T ss_pred heEEEcCCCcEEECccccCccccccccc----------------------------------------------------
Confidence 9999999999999999998653110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 151 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~ 194 (252)
T cd05084 151 ------------------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGA 194 (252)
T ss_pred ------------------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence 00000122456999999988889999999999999999996
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....++.....+..+.+|+.+||.++|++|||+.++++
T Consensus 195 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 195 VPYANLSN-QQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred CCccccCH-HHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5543322 2233333333333344455678899999999999999999999975
No 287
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=3.4e-26 Score=226.67 Aligned_cols=309 Identities=16% Similarity=0.266 Sum_probs=255.1
Q ss_pred ceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEe
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 535 ~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
.+++.|.++++++ ++.+ .+.||.+.|+.++......++.|++.|.+-+||.++++.+ .+...
T Consensus 126 rivssFk~~t~~~------~lvr-----e~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~C-------L~~Y~ 187 (481)
T KOG0300|consen 126 RIVSSFKDGTVKF------RLVR-----ELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGAC-------LATYT 187 (481)
T ss_pred hheeeecCCceeE------eehh-----hhcccccceeeehhhcCCcceeecccccceeEEeeccccc-------eeeec
Confidence 3466777777553 2232 3459999999999988777999999999999999987533 34456
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEE------cCC----------------------------------CeEEE
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWD------VSR----------------------------------SQVLT 654 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd------~~~----------------------------------~~~~~ 654 (879)
+|.+.|+||.|++. +.++++++.|++..||. +.. ..++.
T Consensus 188 GH~GSVNsikfh~s-~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~ 266 (481)
T KOG0300|consen 188 GHTGSVNSIKFHNS-GLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLM 266 (481)
T ss_pred ccccceeeEEeccc-cceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeee
Confidence 79999999999985 99999999999999997 111 01255
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcC
Q 002801 655 EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLR 733 (879)
Q Consensus 655 ~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~ 733 (879)
.+.+|...|.+.+|-. .+..++++|.|.+..+||++++.++..+.. ....+-++-+|. .+++++.+.|.+.++||.|
T Consensus 267 ~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHpt-QrLVvTsSrDtTFRLWDFR 344 (481)
T KOG0300|consen 267 RLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPT-QRLVVTSSRDTTFRLWDFR 344 (481)
T ss_pred eeeccccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCcchhccccccCCc-ceEEEEeccCceeEeccch
Confidence 6778999999999987 899999999999999999999999998875 456888888999 8999999999999999999
Q ss_pred CCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeC
Q 002801 734 NSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSE 813 (879)
Q Consensus 734 ~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~ 813 (879)
..-..+..|+||...|+++.|..+..+++||.|.+|++||++++. .++.++.. ..+++.++.+..+..||.--.
T Consensus 345 eaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMR-----splATIRt-dS~~NRvavs~g~~iIAiPhD 418 (481)
T KOG0300|consen 345 EAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMR-----SPLATIRT-DSPANRVAVSKGHPIIAIPHD 418 (481)
T ss_pred hhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecccc-----Ccceeeec-CCccceeEeecCCceEEeccC
Confidence 776779999999999999999988889999999999999999984 57777763 567999999988888998888
Q ss_pred CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCC-cEEEEEeCCCcEEEEEeC
Q 002801 814 TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSS-NTLVAANSSGNIKILEMV 879 (879)
Q Consensus 814 Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~-~~l~s~~~Dg~I~vw~lv 879 (879)
+..|++||+.... +..+. .....+|...|+|++|..+-+ .-|.+||.|..+-=|.+.
T Consensus 419 NRqvRlfDlnG~R-laRlP--------rtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in 476 (481)
T KOG0300|consen 419 NRQVRLFDLNGNR-LARLP--------RTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKIN 476 (481)
T ss_pred CceEEEEecCCCc-cccCC--------cccccccceeeeeeeccccCcccccccccccceeeeeEec
Confidence 8999999998532 32221 111268899999999985532 038999999999999874
No 288
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.95 E-value=1.3e-27 Score=278.05 Aligned_cols=190 Identities=16% Similarity=0.177 Sum_probs=132.8
Q ss_pred cccCceEEEEeeCCcchhhhhcCCCCC-------------------CChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 52 AAIDPFVHAIEWGDVSLRQWLDKPKRS-------------------VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 52 ~~~~~~lv~e~~~g~sL~~~l~~~~~~-------------------l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
.....|++|||+.+++|.+++...... .....+..|+.||+.||.|||++|||||||||+|
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N 285 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN 285 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence 345689999999999999998543211 1233467899999999999999999999999999
Q ss_pred eeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 113 FVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 113 Ill~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||++. ++.+||+|||+++........
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~----------------------------------------------------- 312 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINY----------------------------------------------------- 312 (566)
T ss_pred EEEeCCCCcEEEEeCCCcccccccccc-----------------------------------------------------
Confidence 99985 579999999999753211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC----------------------C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----------------------V 249 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----------------------~ 249 (879)
.....+||+.|||||.+.... +
T Consensus 313 ------------------------------------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 313 ------------------------------------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred ------------------------------------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 012347889999999764322 3
Q ss_pred CccCcchhHHHHHHHhhcCCCC-ChhhHhHHhhhccc-------------CCCchhh-------ccChhhHHHHHHhcCC
Q 002801 250 SCASDIYRLGVLLFELFCPFST-GEEKTRTMSSLRHR-------------VLPPQLL-------LKFPKEASFCLWLLHP 308 (879)
Q Consensus 250 ~~~sDIwSlGvil~ell~pf~~-~~~~~~~~~~~~~~-------------~~~~~~~-------~~~~~~~~li~~~L~~ 308 (879)
+.++|||||||+||||++|... ..........+... ...+... .......+||.+||.+
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 4567999999999999994332 22221111111110 0000000 0112345899999999
Q ss_pred CCCCCCCHHHHhhcccccCCcC
Q 002801 309 EPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 309 dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
||++|||+.++|+||||+....
T Consensus 437 dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 437 KGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred CcccCCCHHHHhCCcCcCCCCc
Confidence 9999999999999999986543
No 289
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.95 E-value=5.1e-28 Score=260.88 Aligned_cols=205 Identities=18% Similarity=0.116 Sum_probs=154.4
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+....|++++..++ ++.+......|++|||++|++|.+++.+....+++.++..++.||+.||+|||++||+|||||
T Consensus 58 ~~l~~l~h~~i~~~~~-~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlk 136 (284)
T cd05079 58 EILRNLYHENIVKYKG-ICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLA 136 (284)
T ss_pred HHHHhCCCCCeeeeee-EEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 3455667888877665 665554567899999999999999996654568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||+++..........
T Consensus 137 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------------------------- 167 (284)
T cd05079 137 ARNVLVESEHQVKIGDFGLTKAIETDKEYYT------------------------------------------------- 167 (284)
T ss_pred hheEEEcCCCCEEECCCccccccccCcccee-------------------------------------------------
Confidence 9999999999999999999876421100000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 168 --------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~ 209 (284)
T cd05079 168 --------------------------------------VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYC 209 (284)
T ss_pred --------------------------------------ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCC
Confidence 0011345677999999988889999999999999999998
Q ss_pred -CCCCCh--------------hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 -PFSTGE--------------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|+.... ........+......+.....++.+.+|+.+||+.+|.+||++.+++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 210 DSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred CCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 221110 0011111122222233344567889999999999999999999999863
No 290
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=4.5e-26 Score=249.03 Aligned_cols=266 Identities=20% Similarity=0.272 Sum_probs=222.6
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
++-.....+.+|+..+.++...... +.+.|+++.|+++|.+||+|..+|.|.|||....... +.....|
T Consensus 191 laValg~~vylW~~~s~~v~~l~~~-----~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~------~~~~~~h 259 (484)
T KOG0305|consen 191 LAVALGQSVYLWSASSGSVTELCSF-----GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKT------RTLRGSH 259 (484)
T ss_pred EEEEecceEEEEecCCCceEEeEec-----CCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccc------ccccCCc
Confidence 4444555788899888775544332 2789999999999999999999999999998763221 1122237
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEE-eccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCce
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE-MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVS 695 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~-~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~ 695 (879)
...|.|++|+ ...+.+|+.||.|.++|+...+.... +.+|...|+.+.|++ ++.++|+|+.|+.+.|||..+..+
T Consensus 260 ~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~-d~~~lASGgnDN~~~Iwd~~~~~p 335 (484)
T KOG0305|consen 260 ASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSP-DGNQLASGGNDNVVFIWDGLSPEP 335 (484)
T ss_pred CceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECC-CCCeeccCCCccceEeccCCCccc
Confidence 8899999998 67899999999999999988776555 889999999999999 999999999999999999977777
Q ss_pred EEEEe-cCCceEEEEeeCCCCCEEEEEe--CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEE--EcCCcE
Q 002801 696 IGTIK-TKANVCCVQFPLDSGRSLAFGS--ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSA--STDNTL 769 (879)
Q Consensus 696 i~~~~-~~~~v~~v~~~p~~~~~l~tgs--~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~--s~D~~i 769 (879)
+.++. |.+.|-.++|+|....+||+|+ .|++|++||..++.. +... .-...|+.|.|+ ..+.|+++ -.++.|
T Consensus 336 ~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~-i~~v-dtgsQVcsL~Wsk~~kEi~sthG~s~n~i 413 (484)
T KOG0305|consen 336 KFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGAR-IDSV-DTGSQVCSLIWSKKYKELLSTHGYSENQI 413 (484)
T ss_pred cEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcE-eccc-ccCCceeeEEEcCCCCEEEEecCCCCCcE
Confidence 76665 6788999999999899999964 699999999998874 3333 345789999999 66666654 356889
Q ss_pred EEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCC
Q 002801 770 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFP 825 (879)
Q Consensus 770 ~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~ 825 (879)
.||++.+. ..+..+.+|...|..+++||||.+|++|+.|.++++|++-..
T Consensus 414 ~lw~~ps~------~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 414 TLWKYPSM------KLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEEecccc------ceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 99999986 788999999999999999999999999999999999998764
No 291
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.95 E-value=4.2e-28 Score=264.25 Aligned_cols=200 Identities=15% Similarity=0.084 Sum_probs=147.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC------------------CCCChhHHHHHHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK------------------RSVDVYECLHIFRQIV 92 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~------------------~~l~~~~~~~i~~qi~ 92 (879)
.+....|++++..++ .+.++ ...|++|||+.+++|.+++.... ..+++.+++.|+.||+
T Consensus 72 ~l~~l~h~niv~~~~-~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 148 (304)
T cd05096 72 ILSRLKDPNIIRLLG-VCVDE--DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIA 148 (304)
T ss_pred HHhhcCCCCeeEEEE-EEecC--CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 344557888877666 55443 35799999999999999984321 2367788999999999
Q ss_pred HHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccc
Q 002801 93 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 172 (879)
Q Consensus 93 ~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (879)
.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 149 ~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~---------------------------------- 194 (304)
T cd05096 149 SGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY---------------------------------- 194 (304)
T ss_pred HHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCcee----------------------------------
Confidence 9999999999999999999999999999999999998653111000
Q ss_pred cccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCcc
Q 002801 173 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 252 (879)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~ 252 (879)
.......++..|+|||++.+..++.+
T Consensus 195 ------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 220 (304)
T cd05096 195 ------------------------------------------------------RIQGRAVLPIRWMAWECILMGKFTTA 220 (304)
T ss_pred ------------------------------------------------------EecCcCCCCccccCHHHHhcCCCCch
Confidence 00011245778999999988889999
Q ss_pred CcchhHHHHHHHhhc-----CCCCChhhHhHH---hhhcc---cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 253 SDIYRLGVLLFELFC-----PFSTGEEKTRTM---SSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 253 sDIwSlGvil~ell~-----pf~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||||||++|||++ ||.......... ...+. ...+.....+++.+.+|+.+||..||.+|||+.+|.+
T Consensus 221 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 221 SDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred hhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 999999999999985 564432221111 11111 1112222345677899999999999999999999943
No 292
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.95 E-value=3.4e-28 Score=268.60 Aligned_cols=213 Identities=16% Similarity=0.189 Sum_probs=156.1
Q ss_pred eecccccccCCCCCCccccc--ccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 31 ELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
.+...+|++++..++ ++.. ......|++|||+. ++|.+++... ..+++.+++.++.||+.||.|||++||+||||
T Consensus 57 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dl 133 (334)
T cd07855 57 ILRHFKHDNIIAIRD-ILRPPGADFKDVYVVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDL 133 (334)
T ss_pred HHHhcCCCCccCHHH-hccccCCCCceEEEEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 444556888777555 3332 23346799999995 5899999654 45899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.+||+|||+++.........
T Consensus 134 kp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------------------- 164 (334)
T cd07855 134 KPSNLLVNEDCELRIGDFGMARGLSSSPTEH------------------------------------------------- 164 (334)
T ss_pred CHHHEEEcCCCcEEecccccceeecccCcCC-------------------------------------------------
Confidence 9999999999999999999986532110000
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~ 267 (879)
.......+|+.+|+|||.+.+ ..++.++|||||||++|||++
T Consensus 165 -------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~ 207 (334)
T cd07855 165 -------------------------------------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLG 207 (334)
T ss_pred -------------------------------------CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHc
Confidence 000122478999999999866 458999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcc-------------------------cCC-C----chhhccChhhHHHHHHhcCCCCCCCC
Q 002801 268 ---PFSTGEEKTRTMSSLRH-------------------------RVL-P----PQLLLKFPKEASFCLWLLHPEPSGRP 314 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~-------------------------~~~-~----~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (879)
||...... ..+..+.. ... + ......++.+.++|.+||+.+|.+||
T Consensus 208 g~~pf~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 286 (334)
T cd07855 208 RRQLFPGKNYV-HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERI 286 (334)
T ss_pred CCCccCCCChH-HHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCc
Confidence 66443221 11110000 000 0 01133567789999999999999999
Q ss_pred CHHHHhhcccccCCcCchH
Q 002801 315 KMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 315 t~~evl~hp~~~~~~~~~~ 333 (879)
++.++++||||.....+..
T Consensus 287 t~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 287 TVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred CHHHHHhChhhhhccCCcc
Confidence 9999999999987655544
No 293
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.95 E-value=1.2e-27 Score=254.65 Aligned_cols=203 Identities=17% Similarity=0.112 Sum_probs=152.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .|... +...|++|||+.+++|.+++.+....+++..++.++.||+.||+|||+.||+||||||
T Consensus 49 ~l~~l~h~~iv~~~~-~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~ 126 (262)
T cd05058 49 IMKDFSHPNVLSLLG-ICLPS-EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAA 126 (262)
T ss_pred HHccCCCCCcceEEE-EeecC-CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCc
Confidence 345567888887665 55432 3457999999999999999966555678888999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+|++|||+++..........
T Consensus 127 ~nili~~~~~~kl~dfg~~~~~~~~~~~~~-------------------------------------------------- 156 (262)
T cd05058 127 RNCMLDESFTVKVADFGLARDIYDKEYYSV-------------------------------------------------- 156 (262)
T ss_pred ceEEEcCCCcEEECCccccccccCCcceee--------------------------------------------------
Confidence 999999999999999999865321100000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~ 200 (262)
T cd05058 157 ------------------------------------HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 200 (262)
T ss_pred ------------------------------------cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCC
Confidence 00011245678999999988889999999999999999998
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|++...........+.....++.....++.+.+++.+||..+|++||++.++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 201 PPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred CCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 333333333333333333333333345577889999999999999999999986
No 294
>PTZ00421 coronin; Provisional
Probab=99.95 E-value=2.9e-25 Score=252.14 Aligned_cols=232 Identities=16% Similarity=0.206 Sum_probs=185.0
Q ss_pred ccCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCcccccce-EEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 564 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 564 l~~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
+.+|.+.|++++|+| ++.+||+|+.|++|+|||+........ ...++ ....|...|.+++|+|..+++|++++.|++
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~-~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQN-ISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccc-cCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 668999999999999 889999999999999999975321111 11122 234588999999999976689999999999
Q ss_pred EEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc--eEEEEeeCCCCCEEE
Q 002801 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN--VCCVQFPLDSGRSLA 719 (879)
Q Consensus 642 V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~--v~~v~~~p~~~~~l~ 719 (879)
|+|||+.+++.+..+..|...|.+++|+| ++.+|++|+.|++|+|||+++++.+.++..+.. +..+.|.++ +..++
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~-~~~iv 227 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKR-KDLII 227 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCC-CCeEE
Confidence 99999999999999999999999999999 999999999999999999999999888875543 557789988 45555
Q ss_pred EEe----CCCeEEEEEcCCCceeeEEEccCC-CCEEEEEEc-CCCEEEEEE-cCCcEEEEecCCCcccccCCceEEEeC-
Q 002801 720 FGS----ADHRIYYYDLRNSKIPLCTLIGHN-KTVSYVKFV-DATTLVSAS-TDNTLKLWDLSMCTSRVIDTPLHSFTG- 791 (879)
Q Consensus 720 tgs----~d~~I~iwDl~~~~~~~~~~~~h~-~~V~~v~fs-~~~~l~s~s-~D~~i~lwd~~~~~~~~~~~~~~~~~~- 791 (879)
+++ .|+.|++||+++...++.....+. ..+....|+ ++++|++++ .|+.|++||+.++ .++.....
T Consensus 228 t~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~------~~~~~~~~~ 301 (493)
T PTZ00421 228 TLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNE------RLTFCSSYS 301 (493)
T ss_pred EEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCC------ceEEEeecc
Confidence 543 478999999998876666655443 455566677 888888887 5999999999986 34443332
Q ss_pred CCCcEEEEEEecC
Q 002801 792 HTNVKNFVGLSVW 804 (879)
Q Consensus 792 h~~~v~~v~~sp~ 804 (879)
+..++..++|.|.
T Consensus 302 s~~~~~g~~~~pk 314 (493)
T PTZ00421 302 SVEPHKGLCMMPK 314 (493)
T ss_pred CCCCCcceEeccc
Confidence 3456777888874
No 295
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.95 E-value=6.1e-28 Score=268.71 Aligned_cols=202 Identities=20% Similarity=0.260 Sum_probs=149.7
Q ss_pred eeecccccccCCCCCCcccccc----cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 30 VELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
..+...+|++++..++ ++... ....+|+||||+. ++|.+++... +++..+..++.||+.||+|||++||+|
T Consensus 67 ~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H 141 (353)
T cd07850 67 VLMKLVNHKNIIGLLN-VFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIH 141 (353)
T ss_pred HHHHhcCCCCCcceee-eeccCCCccccCcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 3445567888877665 33222 2235799999995 5888888543 899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+||+++.++.+|++|||+++......
T Consensus 142 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------- 172 (353)
T cd07850 142 RDLKPSNIVVKSDCTLKILDFGLARTAGTSF------------------------------------------------- 172 (353)
T ss_pred CCCCHHHEEECCCCCEEEccCccceeCCCCC-------------------------------------------------
Confidence 9999999999999999999999986532110
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 173 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l 210 (353)
T cd07850 173 ------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 210 (353)
T ss_pred ------------------------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHH
Confidence 00123678899999999998999999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcc----------------------cC---------------CCch----hhccChhhHHH
Q 002801 266 FC---PFSTGEEKTRTMSSLRH----------------------RV---------------LPPQ----LLLKFPKEASF 301 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~----------------------~~---------------~~~~----~~~~~~~~~~l 301 (879)
++ ||............+.. .. .+.. .....+.+.+|
T Consensus 211 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (353)
T cd07850 211 IRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDL 290 (353)
T ss_pred HHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHH
Confidence 98 66543321111110000 00 0000 01123457899
Q ss_pred HHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 302 CLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 302 i~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|.+||+.||++|||+.|+|+||||+.
T Consensus 291 i~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 291 LSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred HHHHcCCChhhCcCHHHHhcChhHhh
Confidence 99999999999999999999999874
No 296
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.95 E-value=1.9e-27 Score=228.91 Aligned_cols=248 Identities=18% Similarity=0.286 Sum_probs=211.2
Q ss_pred cceEEeccCCCeeEEEEeC--CCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEE
Q 002801 609 YPVVEMASRSKLSSICWNS--YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686 (879)
Q Consensus 609 ~~~~~~~~~~~i~~l~~~~--~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~ 686 (879)
.|...-+|..+|-.++|+| .++-+|++++.||.-.+=+-+||..+.+|.+|.+.||+..++. +....|+++.|-+.+
T Consensus 6 ~pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~-na~~aasaaadftak 84 (334)
T KOG0278|consen 6 TPLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNK-NATRAASAAADFTAK 84 (334)
T ss_pred CceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCc-hhhhhhhhcccchhh
Confidence 3566677899999999987 3467899999999999988899999999999999999999998 888999999999999
Q ss_pred EEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEc
Q 002801 687 LWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSAST 765 (879)
Q Consensus 687 iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~ 765 (879)
+||.-+|..+.+|.++--|..++|+.+ .++|++|+.+..+++||+...+.|...+.+|.+.|..+.|. ..+.|+|++.
T Consensus 85 vw~a~tgdelhsf~hkhivk~~af~~d-s~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSad 163 (334)
T KOG0278|consen 85 VWDAVTGDELHSFEHKHIVKAVAFSQD-SNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSAD 163 (334)
T ss_pred hhhhhhhhhhhhhhhhheeeeEEeccc-chhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeecc
Confidence 999999999999999999999999999 89999999999999999999998899999999999999998 7888888899
Q ss_pred CCcEEEEecCCCcccccCCceEEEeCCCC----------------------------------------cEEEEEEecCC
Q 002801 766 DNTLKLWDLSMCTSRVIDTPLHSFTGHTN----------------------------------------VKNFVGLSVWD 805 (879)
Q Consensus 766 D~~i~lwd~~~~~~~~~~~~~~~~~~h~~----------------------------------------~v~~v~~sp~~ 805 (879)
|++||+||.+++. .++++.- .. .|.+..++|+.
T Consensus 164 d~tVRLWD~rTgt------~v~sL~~-~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k 236 (334)
T KOG0278|consen 164 DKTVRLWDHRTGT------EVQSLEF-NSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKK 236 (334)
T ss_pred CCceEEEEeccCc------EEEEEec-CCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCC
Confidence 9999999999984 2333221 11 23444556666
Q ss_pred CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 806 GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 806 ~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
.+++||++|..++.||..++..+..+. .+|-++|-||.|+|+|. ..++|+.||+|++|++
T Consensus 237 ~~fVaGged~~~~kfDy~TgeEi~~~n------------kgh~gpVhcVrFSPdGE-~yAsGSEDGTirlWQt 296 (334)
T KOG0278|consen 237 EFFVAGGEDFKVYKFDYNTGEEIGSYN------------KGHFGPVHCVRFSPDGE-LYASGSEDGTIRLWQT 296 (334)
T ss_pred ceEEecCcceEEEEEeccCCceeeecc------------cCCCCceEEEEECCCCc-eeeccCCCceEEEEEe
Confidence 666666666666666666665554421 57889999999999999 9999999999999986
No 297
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.95 E-value=1.4e-27 Score=255.64 Aligned_cols=203 Identities=19% Similarity=0.226 Sum_probs=155.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+ ....|++|||+.|++|.+++++. ..+++..++.++.||+.||.|||++|++|+||||
T Consensus 61 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~ 136 (272)
T cd06629 61 TLKDLDHLNIVQYLG-FETT--EEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKA 136 (272)
T ss_pred HHHhcCCCCcceEEE-Eecc--CCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCCh
Confidence 345567888877666 4443 45789999999999999999665 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||+++........
T Consensus 137 ~nil~~~~~~~~l~d~~~~~~~~~~~~~---------------------------------------------------- 164 (272)
T cd06629 137 DNLLVDADGICKISDFGISKKSDDIYDN---------------------------------------------------- 164 (272)
T ss_pred hhEEEcCCCeEEEeeccccccccccccc----------------------------------------------------
Confidence 9999999999999999998653111000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC--CCccCcchhHHHHHHHhhc-
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvil~ell~- 267 (879)
.......|+..|+|||.+.... ++.++|+|||||++|||++
T Consensus 165 ------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g 208 (272)
T cd06629 165 ------------------------------------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG 208 (272)
T ss_pred ------------------------------------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhC
Confidence 0001235788999999987654 8999999999999999999
Q ss_pred --CCCCChhhHhHHhhhccc---CCCc-hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHR---VLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||................ ..++ .....+..+.+++.+||.++|.+||++.++++||||
T Consensus 209 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 209 RRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred CCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 665443332222211111 1111 123446788999999999999999999999999997
No 298
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.95 E-value=9.9e-28 Score=261.70 Aligned_cols=201 Identities=16% Similarity=0.129 Sum_probs=154.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ +|.+ ....|++|||+. ++|.+++......+++.++..++.||+.||.|||++||+|+||+|
T Consensus 68 ~l~~l~h~niv~~~~-~~~~--~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p 143 (307)
T cd06607 68 FLQQLRHPNTIEYKG-CYLR--EHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKA 143 (307)
T ss_pred HHHhCCCCCEEEEEE-EEEe--CCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCc
Confidence 455667888877666 5544 345799999996 577777754445789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++......
T Consensus 144 ~nIl~~~~~~~kL~dfg~~~~~~~~------------------------------------------------------- 168 (307)
T cd06607 144 GNILLTEPGTVKLADFGSASLVSPA------------------------------------------------------- 168 (307)
T ss_pred ccEEECCCCCEEEeecCcceecCCC-------------------------------------------------------
Confidence 9999999999999999988542110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell~ 267 (879)
....|+..|+|||++. ...++.++|||||||++|||++
T Consensus 169 ---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~t 209 (307)
T cd06607 169 ---------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209 (307)
T ss_pred ---------------------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHc
Confidence 1135678899999885 3458899999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCc-hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
||........... +.....+. .....+..+.+++.+||..+|.+||++.+++.||||.....
T Consensus 210 g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 275 (307)
T cd06607 210 RKPPLFNMNAMSALYH-IAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERP 275 (307)
T ss_pred CCCCCCCccHHHHHHH-HhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCC
Confidence 6655443333222 22221211 12234567889999999999999999999999999986543
No 299
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.95 E-value=1.1e-27 Score=253.83 Aligned_cols=200 Identities=20% Similarity=0.235 Sum_probs=156.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ ... .....|++|||++|++|.+++.+. ...+++..++.++.|++.||+|||++||+|+|||
T Consensus 52 ~l~~~~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~ 128 (256)
T cd08220 52 VLKLLSHPNIIEYYE-NFL--EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLK 128 (256)
T ss_pred HHhhCCCCchhheee-eEe--cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 444557888877666 222 234689999999999999999553 3458999999999999999999999999999999
Q ss_pred CcceeeccCC-CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 110 PSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 110 P~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
|+||+++.++ .+|++|||.+........
T Consensus 129 ~~nil~~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------------- 157 (256)
T cd08220 129 TQNILLDKHKMVVKIGDFGISKILSSKSK--------------------------------------------------- 157 (256)
T ss_pred HHHEEEcCCCCEEEEccCCCceecCCCcc---------------------------------------------------
Confidence 9999998654 579999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.....|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 158 ----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~ 197 (256)
T cd08220 158 ----------------------------------------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASL 197 (256)
T ss_pred ----------------------------------------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhC
Confidence 011367888999999998889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||.............. ...++.....++.+.+++.+||..+|.+|||+.|+++||||
T Consensus 198 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 198 KRAFEAANLPALVLKIMS-GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred CCCcccCchHHHHHHHHh-cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 7755544433333333 22333334567889999999999999999999999999996
No 300
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.95 E-value=5.8e-28 Score=259.45 Aligned_cols=203 Identities=17% Similarity=0.164 Sum_probs=156.9
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
...+...+|++++..++ .+.+ ....|+||||+++++|.+++.. ..+++..++.++.||++||.|||++||+|+||
T Consensus 53 ~~~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl 127 (277)
T cd06642 53 ITVLSQCDSPYITRYYG-SYLK--GTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRDI 127 (277)
T ss_pred HHHHHcCCCCccHhhhc-cccc--CCceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCC
Confidence 33445567888877666 4433 4468999999999999999854 46899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||++........
T Consensus 128 ~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 156 (277)
T cd06642 128 KAANVLLSEQGDVKLADFGVAGQLTDTQI--------------------------------------------------- 156 (277)
T ss_pred ChheEEEeCCCCEEEccccccccccCcch---------------------------------------------------
Confidence 99999999999999999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg 197 (277)
T cd06642 157 ---------------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 197 (277)
T ss_pred ---------------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhC
Confidence 0012367889999999998889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
||....... ....+.....+......+..+.+++.+||..+|.+||++.++++||||..
T Consensus 198 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 198 EPPNSDLHPMR-VLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred CCCCcccchhh-HHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 554322221 11222222222222334567889999999999999999999999999864
No 301
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.95 E-value=1.3e-27 Score=253.55 Aligned_cols=198 Identities=16% Similarity=0.170 Sum_probs=152.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||++|++|.+++......+++..++.++.||+.||+|||++||+||||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p 128 (256)
T cd05114 52 VMMKLSHPKLVQLYG-VCTQ--QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAA 128 (256)
T ss_pred HHHHCCCCCceeEEE-EEcc--CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCc
Confidence 344567888887776 5543 3468999999999999999965545789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||.++........
T Consensus 129 ~ni~i~~~~~~kl~d~g~~~~~~~~~~~---------------------------------------------------- 156 (256)
T cd05114 129 RNCLVSSTGVVKVSDFGMTRYVLDDEYT---------------------------------------------------- 156 (256)
T ss_pred ceEEEcCCCeEEECCCCCccccCCCcee----------------------------------------------------
Confidence 9999999999999999998653111000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||+||||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~ 199 (256)
T cd05114 157 -------------------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGK 199 (256)
T ss_pred -------------------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCC
Confidence 0011134567999999988889999999999999999997
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||........ ...+.....+......+..+.+++.+||..+|.+||++.++++
T Consensus 200 ~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 200 MPFEKKSNYEV-VEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCCCCCCHHHH-HHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 6654433332 3333333233333345567899999999999999999999986
No 302
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.95 E-value=7.8e-28 Score=255.40 Aligned_cols=198 Identities=13% Similarity=0.073 Sum_probs=154.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+ ...+++|||+.+++|.+++... ..+++..+..++.||+.||+|||++||+||||||
T Consensus 49 ~l~~l~h~~i~~~~~-~~~~---~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp 123 (257)
T cd05116 49 VMQQLDNPYIVRMIG-ICEA---ESWMLVMELAELGPLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAA 123 (257)
T ss_pred HHHhCCCCCcceEEE-EEcC---CCcEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccch
Confidence 445567888877765 5543 3579999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++........
T Consensus 124 ~nill~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------------------- 151 (257)
T cd05116 124 RNVLLVTQHYAKISDFGLSKALGADENY---------------------------------------------------- 151 (257)
T ss_pred hhEEEcCCCeEEECCCccccccCCCCCe----------------------------------------------------
Confidence 9999999999999999998764221000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
........++..|+|||.+....++.++|||||||++|||++
T Consensus 152 -----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~ 196 (257)
T cd05116 152 -----------------------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQ 196 (257)
T ss_pred -----------------------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCC
Confidence 000011234678999999988889999999999999999986
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....++.+...++.+.++|.+||..||++||++.+|.+
T Consensus 197 ~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 197 KPYKGMKG-NEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred CCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 6654333 3344444444444455567789999999999999999999999865
No 303
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.95 E-value=8e-28 Score=255.18 Aligned_cols=198 Identities=15% Similarity=0.185 Sum_probs=153.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ +|.+ ....|++|||+.+++|.+++......+++..++.++.||+.||.|||+.||+|+||||+
T Consensus 53 l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ 129 (256)
T cd05113 53 MMKLSHEKLVQLYG-VCTK--QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAAR 129 (256)
T ss_pred HhcCCCCCeeeEEE-EEcc--CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcc
Confidence 44557888887766 5543 34579999999999999999665457899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||.++....+...
T Consensus 130 nili~~~~~~kl~d~g~~~~~~~~~~~----------------------------------------------------- 156 (256)
T cd05113 130 NCLVDDQGCVKVSDFGLSRYVLDDEYT----------------------------------------------------- 156 (256)
T ss_pred eEEEcCCCCEEECCCccceecCCCcee-----------------------------------------------------
Confidence 999999999999999998653111000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---- 267 (879)
......++..|+|||.+.+..++.++|||||||+||||++
T Consensus 157 ------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~ 200 (256)
T cd05113 157 ------------------------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKM 200 (256)
T ss_pred ------------------------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCC
Confidence 0011234677999999988889999999999999999996
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||....... ....+.....++.....++.+.+++.+||+.+|.+||++.+++.+
T Consensus 201 p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 201 PYERFNNSE-TVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred CcCcCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 664433322 223333333333333456788999999999999999999999864
No 304
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.95 E-value=1.1e-25 Score=232.39 Aligned_cols=282 Identities=17% Similarity=0.291 Sum_probs=239.2
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEc
Q 002801 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (879)
Q Consensus 568 ~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~ 647 (879)
...++++...|....++|||.|+.+.+||...... .....+|..+|+.+.+++. ...+++++.|..|+||..
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~-------l~~~~Gh~kki~~v~~~~~-~~~v~~aSad~~i~vws~ 290 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQI-------LATLKGHTKKITSVKFHKD-LDTVITASADEIIRVWSV 290 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecchhhh-------hhhccCcceEEEEEEeccc-hhheeecCCcceEEeecc
Confidence 35688888888778999999999999999876321 1223468889999999995 889999999999999999
Q ss_pred CCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC---CceEEEEeeCCCCCEEEEEeCC
Q 002801 648 SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK---ANVCCVQFPLDSGRSLAFGSAD 724 (879)
Q Consensus 648 ~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~---~~v~~v~~~p~~~~~l~tgs~d 724 (879)
...........|+.+|+.+..+| ++.+|+++|+|++.-..|++++..+....+. -.+++.+|||| |.+|.+|..|
T Consensus 291 ~~~s~~~~~~~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpD-gLifgtgt~d 368 (506)
T KOG0289|consen 291 PLSSEPTSSRPHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPD-GLIFGTGTPD 368 (506)
T ss_pred ccccCccccccccccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCC-ceEEeccCCC
Confidence 88888888889999999999999 9999999999999999999999998877764 34899999999 9999999999
Q ss_pred CeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCC-CcEEEEEEe
Q 002801 725 HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHT-NVKNFVGLS 802 (879)
Q Consensus 725 ~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~-~~v~~v~~s 802 (879)
+.|+|||+.+.. .+..|.+|.++|..|.|+ +|.+|++++.|+.|++||++.. +...++.-.. .+++.+.|.
T Consensus 369 ~~vkiwdlks~~-~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl------~n~kt~~l~~~~~v~s~~fD 441 (506)
T KOG0289|consen 369 GVVKIWDLKSQT-NVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKL------KNFKTIQLDEKKEVNSLSFD 441 (506)
T ss_pred ceEEEEEcCCcc-ccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhh------cccceeeccccccceeEEEc
Confidence 999999999988 489999999999999999 9999999999999999999986 4445554332 369999999
Q ss_pred cCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 803 VWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 803 p~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
+.|.||+.+|.|=.|++++..+.. +. .-..+.+|.+..+.|.|..... ++++++.|..++++.+
T Consensus 442 ~SGt~L~~~g~~l~Vy~~~k~~k~----W~-------~~~~~~~~sg~st~v~Fg~~aq-~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 442 QSGTYLGIAGSDLQVYICKKKTKS----WT-------EIKELADHSGLSTGVRFGEHAQ-YLASTSMDAILRLYAL 505 (506)
T ss_pred CCCCeEEeecceeEEEEEeccccc----ce-------eeehhhhcccccceeeecccce-EEeeccchhheEEeec
Confidence 999999999888777777654321 11 1122367788899999999888 9999999999998864
No 305
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.95 E-value=1.4e-27 Score=260.15 Aligned_cols=219 Identities=16% Similarity=0.128 Sum_probs=158.7
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+. ....+|++|||++|++|.++++.. +.+++..+..++.|++.||.|||+.||+||||||+
T Consensus 55 l~~~~~~~i~~~~~-~~~--~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ 130 (305)
T cd05609 55 LTFAENPFVVSMFC-SFE--TKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPD 130 (305)
T ss_pred HHhCCCCCeeeeEE-EEe--cCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchH
Confidence 34567788877665 333 334679999999999999999654 56899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++..+.+|++|||+++........ .+... .
T Consensus 131 NIll~~~~~~~l~dfg~~~~~~~~~~~-~~~~~---------------------------------------~------- 163 (305)
T cd05609 131 NLLITSMGHIKLTDFGLSKIGLMSLTT-NLYEG---------------------------------------H------- 163 (305)
T ss_pred HEEECCCCCEEEeeCCCccccCcCccc-ccccc---------------------------------------c-------
Confidence 999999999999999998642111000 00000 0
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
. .............|+..|+|||.+.+..++.++|||||||+||||++ |
T Consensus 164 ~----------------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~p 215 (305)
T cd05609 164 I----------------------------EKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVP 215 (305)
T ss_pred c----------------------------ccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 0 00000000112467889999999988889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhccc-CCCchhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccccCCc
Q 002801 269 FSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~~~~~ 329 (879)
|................ ..+......++.+.+++.+||+.+|.+||+ +.++++||||....
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 216 FFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred CCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 76543332222222221 122222245677899999999999999998 79999999997643
No 306
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.95 E-value=2.4e-28 Score=237.22 Aligned_cols=208 Identities=18% Similarity=0.187 Sum_probs=150.4
Q ss_pred cccccccCCCCCCcccccc---cccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcC--cc
Q 002801 33 THGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG--IV 104 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~---~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~g--iv 104 (879)
..-+|++++..+. .+..+ .....||+..|+..|||.+.+. ..+..+++.+++.||.+|++||.+||+.. .+
T Consensus 73 rkf~s~~vl~l~d-h~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yA 151 (302)
T KOG2345|consen 73 RKFNSPNVLRLVD-HQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYA 151 (302)
T ss_pred HhhCCcchHHHHH-HHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCccc
Confidence 3467788877666 33222 2345899999999999999883 33447999999999999999999999998 99
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||.|||++.++.++++|||.+....-.-.. ..+...
T Consensus 152 H~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~-----------------------~~~a~~----------------- 191 (302)
T KOG2345|consen 152 HRDIKPANILLSDSGLPVLMDLGSATQAPIQIEG-----------------------SRQALR----------------- 191 (302)
T ss_pred ccCCCcceeEecCCCceEEEeccCccccceEeec-----------------------hHHHHH-----------------
Confidence 9999999999999999999999999763111000 000000
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC---CCCCccCcchhHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVL 261 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvi 261 (879)
+.++ ....-|..|+|||.+.- ...+.++|||||||+
T Consensus 192 --------------lQe~---------------------------a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCt 230 (302)
T KOG2345|consen 192 --------------LQEW---------------------------AEERCTIPYRAPELFNVKSHCTITERTDIWSLGCT 230 (302)
T ss_pred --------------HHHH---------------------------HHHhCCCcccCchheecccCcccccccchhhhhHH
Confidence 0000 11234788999999863 347899999999999
Q ss_pred HHHhhc---CCCCChhh--HhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~---pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||+|+. ||...... ..+.+........|.....+..+..||.+||+.||.+||++.+++.+
T Consensus 231 LYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 231 LYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred HHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 999998 88543221 11222222233334444477888999999999999999999999864
No 307
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=2.3e-27 Score=259.37 Aligned_cols=201 Identities=16% Similarity=0.168 Sum_probs=155.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+. ++|.+++.....++++.+++.++.||+.||.|||++||+|+||||
T Consensus 74 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p 149 (313)
T cd06633 74 FLQQLKHPNTIEYKG-CYLK--EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKA 149 (313)
T ss_pred HHHhCCCCCCccEEE-EEEe--CCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCh
Confidence 445567888877666 4443 345799999995 578888765556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++.....
T Consensus 150 ~nili~~~~~~kL~dfg~~~~~~~-------------------------------------------------------- 173 (313)
T cd06633 150 GNILLTEPGQVKLADFGSASKSSP-------------------------------------------------------- 173 (313)
T ss_pred hhEEECCCCCEEEeecCCCcccCC--------------------------------------------------------
Confidence 999999999999999998743200
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell~ 267 (879)
.....|+..|+|||++. ...++.++|||||||++|||++
T Consensus 174 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~ 215 (313)
T cd06633 174 --------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 215 (313)
T ss_pred --------------------------------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHh
Confidence 01136788899999984 3558999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
||.........................+..+.+|+.+||+++|.+||++.+++.||||....
T Consensus 216 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 216 RKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred CCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 77655443333333222221112223445688999999999999999999999999998644
No 308
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=4.8e-25 Score=251.15 Aligned_cols=250 Identities=14% Similarity=0.178 Sum_probs=192.5
Q ss_pred EEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe--------EEEEe
Q 002801 585 AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ--------VLTEM 656 (879)
Q Consensus 585 t~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~--------~~~~~ 656 (879)
.||.++.|++|+..... .......|...|.+++|+|.++++|++|+.||+|+|||+.++. ++..+
T Consensus 49 gGG~~gvI~L~~~~r~~-------~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L 121 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKP-------PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCIL 121 (568)
T ss_pred CCCceeEEEeeecCCCc-------eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEe
Confidence 36778899999876420 1112346889999999999768899999999999999997542 34467
Q ss_pred ccCCCcEEEEEEecCCCC-EEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCC
Q 002801 657 REHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS 735 (879)
Q Consensus 657 ~~h~~~v~sv~~sp~~~~-~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~ 735 (879)
.+|...|++++|+| ++. +|++|+.|++|+|||+++++.+..+.++..|.+++|+|+ +.+|++++.|+.|++||++++
T Consensus 122 ~gH~~~V~sVaf~P-~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~Slswspd-G~lLat~s~D~~IrIwD~Rsg 199 (568)
T PTZ00420 122 KGHKKKISIIDWNP-MNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIK-GNLLSGTCVGKHMHIIDPRKQ 199 (568)
T ss_pred ecCCCcEEEEEECC-CCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCC-CCEEEEEecCCEEEEEECCCC
Confidence 78999999999999 555 568999999999999999988888887788999999999 889999999999999999998
Q ss_pred ceeeEEEccCCCCEEE-----EEEc-CCCEEEEEEcCC----cEEEEecCCCcccccCCceEEEeCC--CCcEEEEEEec
Q 002801 736 KIPLCTLIGHNKTVSY-----VKFV-DATTLVSASTDN----TLKLWDLSMCTSRVIDTPLHSFTGH--TNVKNFVGLSV 803 (879)
Q Consensus 736 ~~~~~~~~~h~~~V~~-----v~fs-~~~~l~s~s~D~----~i~lwd~~~~~~~~~~~~~~~~~~h--~~~v~~v~~sp 803 (879)
+. +..+.+|.+.+.. ..|+ ++.+|+|++.|+ +|+|||++.. ..++..+..+ .+.+......+
T Consensus 200 ~~-i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~-----~~pl~~~~ld~~~~~L~p~~D~~ 273 (568)
T PTZ00420 200 EI-ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNT-----TSALVTMSIDNASAPLIPHYDES 273 (568)
T ss_pred cE-EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCC-----CCceEEEEecCCccceEEeeeCC
Confidence 74 7788999876433 3344 778899888764 7999999975 2455555433 33333344455
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCC
Q 002801 804 WDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSS 861 (879)
Q Consensus 804 ~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 861 (879)
+|.++++|+.|+.|++|++..+. +..+. . ..+..++.+++|.|+..
T Consensus 274 tg~l~lsGkGD~tIr~~e~~~~~-~~~l~----------~-~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 274 TGLIYLIGKGDGNCRYYQHSLGS-IRKVN----------E-YKSCSPFRSFGFLPKQI 319 (568)
T ss_pred CCCEEEEEECCCeEEEEEccCCc-EEeec----------c-cccCCCccceEEccccc
Confidence 68899999999999999997653 11111 0 12456788899998743
No 309
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.95 E-value=1e-27 Score=258.42 Aligned_cols=202 Identities=17% Similarity=0.213 Sum_probs=152.6
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
..+.+.+|++++..++ .+.+ ....|++|||+. ++|..++.. ....+++..++.++.||+.||+|||++||+|+||
T Consensus 51 ~~l~~l~h~~i~~~~~-~~~~--~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l 126 (284)
T cd07860 51 SLLKELNHPNIVKLLD-VIHT--ENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 126 (284)
T ss_pred HHHHhcCCCCCcchhh-hccc--CCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 3455667888888777 4433 446899999995 689998843 3356899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.+|++|||+++..+....
T Consensus 127 ~p~nill~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 155 (284)
T cd07860 127 KPQNLLINTEGAIKLADFGLARAFGVPVR--------------------------------------------------- 155 (284)
T ss_pred CHHHEEECCCCCEEEeeccchhhcccCcc---------------------------------------------------
Confidence 99999999999999999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~ 267 (879)
......++.+|+|||.+.+.. ++.++|||||||++|||++
T Consensus 156 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t 196 (284)
T cd07860 156 ---------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 196 (284)
T ss_pred ---------------------------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHH
Confidence 001135688899999987755 6889999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCC---------------------------CchhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVL---------------------------PPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.................. .......++.+.++|.+||+.||.+|||++
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 276 (284)
T cd07860 197 RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAK 276 (284)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHH
Confidence 67554433222221111000 001123456778999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
+++.||||
T Consensus 277 ~~l~~~~f 284 (284)
T cd07860 277 AALAHPFF 284 (284)
T ss_pred HHhcCCCC
Confidence 99999998
No 310
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.95 E-value=1.3e-27 Score=257.08 Aligned_cols=198 Identities=15% Similarity=0.079 Sum_probs=152.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .|.. ...+++|||+++|+|.+++......+++.+++.++.||+.||.|||++||+||||||
T Consensus 62 ~l~~~~~~~i~~~~~-~~~~---~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp 137 (279)
T cd05109 62 VMAGVGSPYVCRLLG-ICLT---STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAA 137 (279)
T ss_pred HHHhcCCCCCceEEE-EEcC---CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 344566777776665 5543 357899999999999999976556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.........
T Consensus 138 ~Nil~~~~~~~kL~dfG~~~~~~~~~~~~--------------------------------------------------- 166 (279)
T cd05109 138 RNVLVKSPNHVKITDFGLARLLDIDETEY--------------------------------------------------- 166 (279)
T ss_pred ceEEEcCCCcEEECCCCceeeccccccee---------------------------------------------------
Confidence 99999999999999999987642110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 167 -------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~ 209 (279)
T cd05109 167 -------------------------------------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGA 209 (279)
T ss_pred -------------------------------------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCC
Confidence 0000133567999999988889999999999999999986
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+.....++.....++.+.+++.+||..||++||++.+++.
T Consensus 210 ~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 210 KPYDGIP-AREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CCCCCCC-HHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 554332 22233334444344444566788899999999999999999999985
No 311
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.95 E-value=1.1e-27 Score=255.69 Aligned_cols=207 Identities=15% Similarity=0.177 Sum_probs=157.2
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+.+..|++++..++ .+.+ ....+++|||+.|++|.+++++. .++++..+..+++||+.||.|||++||+|+|||
T Consensus 55 ~~l~~l~h~~iv~~~~-~~~~--~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~ 130 (268)
T cd06630 55 RLMARLNHPHIIRMLG-ATCE--DSHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVK 130 (268)
T ss_pred HHHHHcCCCceehhhc-eecc--CCeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 3445567888877776 4433 34689999999999999999654 478999999999999999999999999999999
Q ss_pred CcceeeccCC-CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 110 PSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 110 P~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
|+||+++..+ .+|++|||.+...........
T Consensus 131 ~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------------------------ 162 (268)
T cd06630 131 GANLLIDSTGQRLRIADFGAAARLAAKGTGAG------------------------------------------------ 162 (268)
T ss_pred HHHEEEcCCCCEEEEcccccccccccccccCC------------------------------------------------
Confidence 9999998776 599999999866422200000
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
. ......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 163 -----------------------------------~---~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g 204 (268)
T cd06630 163 -----------------------------------E---FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATA 204 (268)
T ss_pred -----------------------------------c---cccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhC
Confidence 0 0012367889999999988889999999999999999999
Q ss_pred --CCCCChh--hHhHHhhh-cccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 268 --PFSTGEE--KTRTMSSL-RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 268 --pf~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
||..... ........ .....+......++.+.+++.+||..+|.+||++.++++||||.
T Consensus 205 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 205 KPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred CCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 6643321 11112111 11222333344567889999999999999999999999999984
No 312
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=1.2e-25 Score=223.49 Aligned_cols=310 Identities=17% Similarity=0.215 Sum_probs=232.1
Q ss_pred EEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEE
Q 002801 546 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW 625 (879)
Q Consensus 546 ~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 625 (879)
+-|+-.+.....-|....|.+|.+.|++++|+.||++|||++.|+.|+||++..-.+.........++.. ..+.+.|
T Consensus 64 ~~~k~~q~~f~Hpl~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~d---hpT~V~F 140 (420)
T KOG2096|consen 64 DQWKAKQPTFVHPLNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYD---HPTRVVF 140 (420)
T ss_pred hhhcccCCCcccchhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCC---CceEEEE
Confidence 3455555555555666678899999999999999999999999999999999874443332222233333 4678999
Q ss_pred eCCCCCeEEEeeCCCcEEEEEcCCCe---EEE---------EeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 626 NSYIKSQIASSNFEGVVQVWDVSRSQ---VLT---------EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 626 ~~~~~~~l~s~~~dg~V~vwd~~~~~---~~~---------~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
.|.....++++-...++++|.+...+ ... .-+.|.-.|-++-..- ++.++++++.|..|.|||++ |
T Consensus 141 apDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-G 218 (420)
T KOG2096|consen 141 APDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLK-G 218 (420)
T ss_pred CCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecC-C
Confidence 99888899999888999999875322 111 1123555666666665 78899999999999999999 9
Q ss_pred ceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc-------eeeEEEccCCCCEEEEEEc-CCCEEEEEE
Q 002801 694 VSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-------IPLCTLIGHNKTVSYVKFV-DATTLVSAS 764 (879)
Q Consensus 694 ~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~-------~~~~~~~~h~~~V~~v~fs-~~~~l~s~s 764 (879)
+.+.++... ..-...+.+|+ |+++++++.---|++|.+--.+ ..+..++||+++|..++|+ +.+.++|.|
T Consensus 219 q~L~~idtnq~~n~~aavSP~-GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvS 297 (420)
T KOG2096|consen 219 QLLQSIDTNQSSNYDAAVSPD-GRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVS 297 (420)
T ss_pred ceeeeeccccccccceeeCCC-CcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEe
Confidence 999988863 45677889999 9999999999999999974322 2366789999999999999 999999999
Q ss_pred cCCcEEEEecCCCccc-ccCCceEEEe----CCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCC
Q 002801 765 TDNTLKLWDLSMCTSR-VIDTPLHSFT----GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPL 839 (879)
Q Consensus 765 ~D~~i~lwd~~~~~~~-~~~~~~~~~~----~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~ 839 (879)
.||+++|||+...-.. .-...+++.. .-.+.-..+.++|+|+.||... ...+.+|..+.++..-.++
T Consensus 298 kDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e------- 369 (420)
T KOG2096|consen 298 KDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELE------- 369 (420)
T ss_pred cCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHH-------
Confidence 9999999998753111 0012222221 1122333789999999887665 4469999888766544332
Q ss_pred CCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEE
Q 002801 840 SGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 840 ~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw 876 (879)
+.|.+.|++++|+++|. +++||| |..++|+
T Consensus 370 -----~~h~~~Is~is~~~~g~-~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 370 -----DIHSTTISSISYSSDGK-YIATCG-DRYVRVI 399 (420)
T ss_pred -----HhhcCceeeEEecCCCc-EEeeec-ceeeeee
Confidence 57888999999999999 899988 5666665
No 313
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.95 E-value=8e-28 Score=255.04 Aligned_cols=201 Identities=17% Similarity=0.207 Sum_probs=159.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+. .....|++|||+.+++|.+++... ...+++..++.++.||+.||.|||++||+|+||+
T Consensus 52 ~l~~l~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~ 128 (256)
T cd08218 52 VLSNMKHPNIVQYQE-SFE--ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIK 128 (256)
T ss_pred HHHhCCCCCeeeeEe-eec--CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence 345567777777665 333 345789999999999999998543 3467999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++........
T Consensus 129 ~~nil~~~~~~~~l~d~~~~~~~~~~~~---------------------------------------------------- 156 (256)
T cd08218 129 SQNIFLTKDGTIKLGDFGIARVLNSTVE---------------------------------------------------- 156 (256)
T ss_pred HHHEEEcCCCCEEEeeccceeecCcchh----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~ 198 (256)
T cd08218 157 --------------------------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLK 198 (256)
T ss_pred --------------------------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCC
Confidence 0011357888999999988889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||............ ..+..++.....+..+.++|.+||+.+|.+||++.++++||||
T Consensus 199 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 199 HAFEAGNMKNLVLKI-IRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CCccCCCHHHHHHHH-hcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 77655444433333 3333444445567789999999999999999999999999997
No 314
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.95 E-value=7.6e-28 Score=256.25 Aligned_cols=204 Identities=22% Similarity=0.209 Sum_probs=161.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlK 109 (879)
.+...+|++++..+. .+.. ...+|++|||+++++|.+++... ..+++..++.++.||++||+|||+ +|++|+||+
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~ 127 (264)
T cd06623 52 TLRSCESPYVVKCYG-AFYK--EGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIK 127 (264)
T ss_pred HHHhcCCCCeeeEEE-EEcc--CCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCC
Confidence 344455777777666 3333 35689999999999999999654 578999999999999999999999 999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++.........
T Consensus 128 ~~ni~~~~~~~~~l~df~~~~~~~~~~~~--------------------------------------------------- 156 (264)
T cd06623 128 PSNLLINSKGEVKIADFGISKVLENTLDQ--------------------------------------------------- 156 (264)
T ss_pred HHHEEECCCCCEEEccCccceecccCCCc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....|+..|+|||.+.+..++.++||||||+++|||++
T Consensus 157 ---------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~ 197 (264)
T cd06623 157 ---------------------------------------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGK 197 (264)
T ss_pred ---------------------------------------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 012357888999999988889999999999999999999
Q ss_pred -CCCCCh--hhHhHHhhhcccCCCchhhc-cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 -PFSTGE--EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 -pf~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||.... ........+.....++.... .+..+.+++.+||.++|++||++.++++||||+..
T Consensus 198 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 198 FPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred CCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 775543 33333344444434444444 66789999999999999999999999999999753
No 315
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.95 E-value=1.2e-27 Score=254.80 Aligned_cols=192 Identities=12% Similarity=0.122 Sum_probs=145.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ +|.++ ...|++|||+++++|..++......+++..++.++.||+.||+|||++||+||||||
T Consensus 57 ~l~~l~hp~iv~~~~-~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp 133 (262)
T cd05077 57 MMRQVSHKHIVLLYG-VCVRD--VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCT 133 (262)
T ss_pred HHHhCCCCCEeeEEE-EEecC--CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCc
Confidence 344568888888776 55433 457999999999999999866556799999999999999999999999999999999
Q ss_pred cceeeccCCC-------eeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 111 SCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 111 ~NIll~~~~~-------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+|||++.++. ++++|||++......
T Consensus 134 ~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~------------------------------------------------ 165 (262)
T cd05077 134 KNILLAREGIDGECGPFIKLSDPGIPITVLSR------------------------------------------------ 165 (262)
T ss_pred ccEEEecCCccCCCCceeEeCCCCCCccccCc------------------------------------------------
Confidence 9999987664 899999987543110
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-CCCCCccCcchhHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLL 262 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDIwSlGvil 262 (879)
....|+..|+|||.+. +..++.++|||||||+|
T Consensus 166 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 199 (262)
T cd05077 166 ----------------------------------------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTL 199 (262)
T ss_pred ----------------------------------------------ccccccccccChhhhcCCCCCCchhHHHHHHHHH
Confidence 1135678899999987 45689999999999999
Q ss_pred HHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 263 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 263 ~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|||++ ||..... .... ....... .......+.+.+|+.+||+.||.+||++.+++++
T Consensus 200 ~el~~~~~~p~~~~~~-~~~~-~~~~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 200 WEICYNGEIPLKDKTL-AEKE-RFYEGQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHhCCCCCCCCcch-hHHH-HHHhcCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 99984 5543221 1111 1111111 1111223568899999999999999999999874
No 316
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.95 E-value=8.5e-28 Score=263.15 Aligned_cols=213 Identities=17% Similarity=0.174 Sum_probs=155.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+....|++++..++ ++.+ ....|++|||+.+++|.+++... ...+++..++.+++||+.||+|||++||+|||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk 128 (314)
T cd08216 52 TSRQLQHPNILPYVT-SFIV--DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVK 128 (314)
T ss_pred HHHhcCCcchhhhhh-eeec--CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 444557888877666 3332 34579999999999999999542 3468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||.+..........
T Consensus 129 ~~Nili~~~~~~kl~d~~~~~~~~~~~~~~-------------------------------------------------- 158 (314)
T cd08216 129 ASHILLSGDGKVVLSGLRYSVSMIKHGKRQ-------------------------------------------------- 158 (314)
T ss_pred cceEEEecCCceEEecCccceeeccccccc--------------------------------------------------
Confidence 999999999999999999886531110000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC--CCCccCcchhHHHHHHHhhc
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvil~ell~ 267 (879)
...........++..|+|||++.+. .++.++|||||||++|||++
T Consensus 159 ---------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~ 205 (314)
T cd08216 159 ---------------------------------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELAN 205 (314)
T ss_pred ---------------------------------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHh
Confidence 0000000223568889999998763 48999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccC--------CC------------------------chhhccChhhHHHHHHhcCCCCCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHRV--------LP------------------------PQLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~--------~~------------------------~~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
||............+.... .+ +.....++.+.+|+.+||..||++
T Consensus 206 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 285 (314)
T cd08216 206 GHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPES 285 (314)
T ss_pred CCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCc
Confidence 7765443333222221110 00 001112345779999999999999
Q ss_pred CCCHHHHhhcccccCCc
Q 002801 313 RPKMGELLQSEFLNEPR 329 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~~ 329 (879)
|||+.++++||||+...
T Consensus 286 Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 286 RPSASQLLNHSFFKQCK 302 (314)
T ss_pred CcCHHHHhcCchHhhhc
Confidence 99999999999998654
No 317
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.95 E-value=1.2e-27 Score=261.18 Aligned_cols=207 Identities=16% Similarity=0.231 Sum_probs=149.6
Q ss_pred eecccccccCCCCCCccccccc------ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
.+....|++++..++ +|.+.. ....|++|||+. ++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 64 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~ 141 (310)
T cd07865 64 ILQLLKHENVVNLIE-ICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKIL 141 (310)
T ss_pred HHHhCCCCCccceEE-EEecccccccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344556777776665 554322 234699999996 588888866555789999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
|+||||+||+++.++.+|++|||++..........
T Consensus 142 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~--------------------------------------------- 176 (310)
T cd07865 142 HRDMKAANILITKDGILKLADFGLARAFSLSKNSK--------------------------------------------- 176 (310)
T ss_pred ccCCCHHHEEECCCCcEEECcCCCcccccCCcccC---------------------------------------------
Confidence 99999999999999999999999987542210000
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ 263 (879)
+......+++..|+|||.+.+.. ++.++|||||||++|
T Consensus 177 -----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~ 215 (310)
T cd07865 177 -----------------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMA 215 (310)
T ss_pred -----------------------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHH
Confidence 00001236788999999987654 789999999999999
Q ss_pred Hhhc---CCCCChhhHhH--HhhhcccCCCch----------------------------hhccChhhHHHHHHhcCCCC
Q 002801 264 ELFC---PFSTGEEKTRT--MSSLRHRVLPPQ----------------------------LLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 264 ell~---pf~~~~~~~~~--~~~~~~~~~~~~----------------------------~~~~~~~~~~li~~~L~~dP 310 (879)
||++ ||......... ...+.....+.. .....+.+.+||.+||..||
T Consensus 216 el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P 295 (310)
T cd07865 216 EMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDP 295 (310)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCCh
Confidence 9998 55443322111 111111100000 00123556799999999999
Q ss_pred CCCCCHHHHhhcccc
Q 002801 311 SGRPKMGELLQSEFL 325 (879)
Q Consensus 311 ~~Rpt~~evl~hp~~ 325 (879)
.+|||++++++||||
T Consensus 296 ~~R~t~~e~l~h~~f 310 (310)
T cd07865 296 AKRIDADTALNHDFF 310 (310)
T ss_pred hhccCHHHHhcCCCC
Confidence 999999999999998
No 318
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.95 E-value=9.3e-28 Score=258.97 Aligned_cols=201 Identities=16% Similarity=0.214 Sum_probs=152.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||+++++|..++... ..+++..++.++.||+.||.|||++||+|+||||
T Consensus 53 ~l~~~~h~~i~~~~~-~~~~--~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p 128 (286)
T cd07847 53 MLKQLKHPNLVNLIE-VFRR--KRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKP 128 (286)
T ss_pred HHHhCCCCCEeeeee-EEee--CCEEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCh
Confidence 445567888877666 4433 34679999999999998887554 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||++........
T Consensus 129 ~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 155 (286)
T cd07847 129 ENILITKQGQIKLCDFGFARILTGPGD----------------------------------------------------- 155 (286)
T ss_pred hhEEEcCCCcEEECccccceecCCCcc-----------------------------------------------------
Confidence 999999999999999999865421100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++.+|+|||.+.+ ..++.++|||||||++|||++
T Consensus 156 -------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~ 198 (286)
T cd07847 156 -------------------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQ 198 (286)
T ss_pred -------------------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCC
Confidence 0011356889999999876 458999999999999999999
Q ss_pred -CCCCChhhHhHHhhhc---c-----------------cCCC---------chhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 -PFSTGEEKTRTMSSLR---H-----------------RVLP---------PQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~---~-----------------~~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.............. . ...+ ......+..+.+|+.+||.++|++||++.
T Consensus 199 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 278 (286)
T cd07847 199 PLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCE 278 (286)
T ss_pred CCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHH
Confidence 6654333222211100 0 0000 01223456788999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
|++.||||
T Consensus 279 eil~~~~f 286 (286)
T cd07847 279 ELLEHPYF 286 (286)
T ss_pred HHhcCCCC
Confidence 99999998
No 319
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95 E-value=3e-28 Score=224.50 Aligned_cols=204 Identities=17% Similarity=0.201 Sum_probs=160.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|+|++..+. +.. ....+.+|.||| ..+|..+...-.+.++.+.++.++.|+++||.|+|++++.||||||
T Consensus 54 llkelkhknivrl~d-vlh--sdkkltlvfe~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkp 129 (292)
T KOG0662|consen 54 LLKELKHKNIVRLHD-VLH--SDKKLTLVFEFC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKP 129 (292)
T ss_pred HHHHhhhcceeehhh-hhc--cCceeEEeHHHh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCc
Confidence 344456777777766 433 334678999999 6689999988788899999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
.|.||+.+|.+|++|||+++.++.+...
T Consensus 130 qnllin~ngelkladfglarafgipvrc---------------------------------------------------- 157 (292)
T KOG0662|consen 130 QNLLINRNGELKLADFGLARAFGIPVRC---------------------------------------------------- 157 (292)
T ss_pred ceEEeccCCcEEecccchhhhcCCceEe----------------------------------------------------
Confidence 9999999999999999999887554111
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~-- 267 (879)
....+-|.||++|.++.|.. |+++.|+||.|||+.||..
T Consensus 158 --------------------------------------ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanag 199 (292)
T KOG0662|consen 158 --------------------------------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199 (292)
T ss_pred --------------------------------------eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcC
Confidence 01236699999999999987 8999999999999999988
Q ss_pred -CCCCChhhHhHHhhhcc-------cCCC-----------c------hhh----ccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 -PFSTGEEKTRTMSSLRH-------RVLP-----------P------QLL----LKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~-------~~~~-----------~------~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
|.+++.+.......+-. ...| | .+. ......++|++++|.-+|.+|+++++
T Consensus 200 rplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaea 279 (292)
T KOG0662|consen 200 RPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEA 279 (292)
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHH
Confidence 77776655444333211 0000 0 111 12234579999999999999999999
Q ss_pred HhhcccccCC
Q 002801 319 LLQSEFLNEP 328 (879)
Q Consensus 319 vl~hp~~~~~ 328 (879)
+++||||...
T Consensus 280 alqhpyf~d~ 289 (292)
T KOG0662|consen 280 ALQHPYFSDF 289 (292)
T ss_pred HhcCcccccc
Confidence 9999999864
No 320
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.95 E-value=7.6e-28 Score=258.52 Aligned_cols=202 Identities=17% Similarity=0.189 Sum_probs=158.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .+.+ ....|+||||++|++|.+++.. .++++..+..++.|++.||+|||+.||+|+||+|
T Consensus 55 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p 129 (277)
T cd06640 55 VLSQCDSPYVTKYYG-SYLK--GTKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKA 129 (277)
T ss_pred HHHhCCCCCEeeEEE-EEEE--CCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCCh
Confidence 445567888877777 4433 3468999999999999999965 4589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 130 ~Nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 156 (277)
T cd06640 130 ANVLLSEQGDVKLADFGVAGQLTDTQI----------------------------------------------------- 156 (277)
T ss_pred hhEEEcCCCCEEEcccccceeccCCcc-----------------------------------------------------
Confidence 999999999999999999865321100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|+|||||++|||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~ 199 (277)
T cd06640 157 -------------------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP 199 (277)
T ss_pred -------------------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCC
Confidence 0011357888999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||...... .....+.....+......+..+.+++.+||..+|++||++.++++||||...
T Consensus 200 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 200 PNSDMHPM-RVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred CCCCcChH-hHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 66433322 2222222222333333455778899999999999999999999999999653
No 321
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.95 E-value=1.1e-27 Score=259.36 Aligned_cols=199 Identities=18% Similarity=0.147 Sum_probs=153.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------CCCCChhHHHHHHHHHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIV 95 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l 95 (879)
.+...+|++++..++ .+.+ ....|++|||+++++|.+++... ...+++..++.++.||+.||
T Consensus 60 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 136 (291)
T cd05094 60 LLTNLQHEHIVKFYG-VCGD--GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGM 136 (291)
T ss_pred HHhcCCCCCcceEEE-EEcc--CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHH
Confidence 445567888877666 5543 34689999999999999999542 23478999999999999999
Q ss_pred HhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcccccccccc
Q 002801 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (879)
Q Consensus 96 ~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (879)
.|||++||+||||||+|||++.++.++++|||++.........
T Consensus 137 ~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~------------------------------------- 179 (291)
T cd05094 137 VYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY------------------------------------- 179 (291)
T ss_pred HHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCcee-------------------------------------
Confidence 9999999999999999999999999999999998653211000
Q ss_pred CCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcc
Q 002801 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (879)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (879)
.......|+..|+|||.+.+..++.++||
T Consensus 180 ---------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 208 (291)
T cd05094 180 ---------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTESDV 208 (291)
T ss_pred ---------------------------------------------------ecCCCCCcceeecChHHhccCCCCchhhH
Confidence 00011356788999999998889999999
Q ss_pred hhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 256 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 256 wSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|||||++|||++ ||...... .....+.....+......+..+.+++.+||..+|.+||++.++++
T Consensus 209 ~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 209 WSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 999999999997 66444332 233334444343333445678899999999999999999999975
No 322
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.95 E-value=1.3e-27 Score=253.57 Aligned_cols=199 Identities=17% Similarity=0.181 Sum_probs=153.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+ ....|++|||++|++|.+++......+++..++.|+.||+.||.|||++||+||||||
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p 128 (256)
T cd05059 52 VMMKLSHPNLVQLYG-VCTK--QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAA 128 (256)
T ss_pred HHHhCCCCCEEEEEE-EEcC--CCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccH
Confidence 344567788777665 4432 3468999999999999999966555789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++........
T Consensus 129 ~ni~i~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------------------- 156 (256)
T cd05059 129 RNCLVGEDNVVKVSDFGLARYVLDDQYT---------------------------------------------------- 156 (256)
T ss_pred hhEEECCCCcEEECCcccceeccccccc----------------------------------------------------
Confidence 9999999999999999998653211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~ 199 (256)
T cd05059 157 -------------------------------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGK 199 (256)
T ss_pred -------------------------------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCC
Confidence 0000123457999999998889999999999999999997
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||..... ......+.....++.+...++.+.+++.+||..+|++|||+.++++.
T Consensus 200 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 200 MPYERFSN-SEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 6644333 23333333333334444567889999999999999999999999863
No 323
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.95 E-value=2.7e-27 Score=251.45 Aligned_cols=199 Identities=19% Similarity=0.202 Sum_probs=156.9
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC--------CCCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--------~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
+....|++++..+. ++.+ ....|++|||+++++|.++++.. ...+++.+++.++.||+.||+|||++||
T Consensus 50 l~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 126 (262)
T cd00192 50 MKKLGHPNVVRLLG-VCTE--EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF 126 (262)
T ss_pred HhhcCCCChheeee-eecC--CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 33445778777666 5544 55689999999999999999665 4678999999999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+|+||||+||+++.++.+|++|||.+.........
T Consensus 127 ~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 161 (262)
T cd00192 127 VHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYY--------------------------------------------- 161 (262)
T ss_pred ccCccCcceEEECCCCcEEEccccccccccccccc---------------------------------------------
Confidence 99999999999999999999999999764221000
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
.......++..|+|||.+.+..++.++|||||||++|
T Consensus 162 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 198 (262)
T cd00192 162 -------------------------------------------RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLW 198 (262)
T ss_pred -------------------------------------------ccccCCCcCccccCHHHhccCCcchhhccHHHHHHHH
Confidence 0001235678899999998888999999999999999
Q ss_pred Hhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 264 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 264 ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||++ ||.... .......+......+.....++.+.+++.+||..+|.+||++.+++.+
T Consensus 199 ~l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 199 EIFTLGATPYPGLS-NEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 9987 665443 333333444344444445567889999999999999999999999874
No 324
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.95 E-value=1.9e-27 Score=252.67 Aligned_cols=192 Identities=16% Similarity=0.192 Sum_probs=145.3
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ ++.+ ....|++|||+.+++|.+++......+++..++.++.||+.||+|||++||+||||||+
T Consensus 53 l~~~~h~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~ 129 (258)
T cd05078 53 MSQLSHKHLVLNYG-VCVC--GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAK 129 (258)
T ss_pred HHhCCCCChhheee-EEEe--CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccc
Confidence 44567888887776 4443 34679999999999999999766567899999999999999999999999999999999
Q ss_pred ceeeccCCC--------eeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 112 CFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 112 NIll~~~~~--------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
||+++.++. ++++|||++......
T Consensus 130 nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~------------------------------------------------ 161 (258)
T cd05078 130 NVLLIREEDRKTGNPPFIKLSDPGISITVLPK------------------------------------------------ 161 (258)
T ss_pred eEEEecccccccCCCceEEecccccccccCCc------------------------------------------------
Confidence 999987765 578888876432100
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil 262 (879)
....++..|+|||++.+. .++.++|||||||++
T Consensus 162 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 195 (258)
T cd05078 162 ----------------------------------------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTL 195 (258)
T ss_pred ----------------------------------------------hhccccCCccCchhccCCCCCCchhhHHHHHHHH
Confidence 113567889999999874 489999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|||++ +++............... ...+...++++.+|+.+||+.+|++|||++++++.
T Consensus 196 ~~l~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 196 WEIFSGGDKPLSALDSQKKLQFYEDR--HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHcCCCCChhhccHHHHHHHHHcc--ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 99999 232222222222211111 11222344678999999999999999999999863
No 325
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.95 E-value=1.1e-27 Score=258.89 Aligned_cols=199 Identities=18% Similarity=0.123 Sum_probs=152.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC------------CCCChhHHHHHHHHHHHHHHhh
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK------------RSVDVYECLHIFRQIVEIVYAA 98 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~------------~~l~~~~~~~i~~qi~~~l~~l 98 (879)
.+....|++++..++ .+.+ ...+|++|||+.+++|.+++.... ..+++..++.++.||+.||+||
T Consensus 60 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~l 136 (288)
T cd05093 60 LLTNLQHEHIVKFYG-VCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYL 136 (288)
T ss_pred HHHhCCCCCcceEEE-EEec--CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 445567888877666 5543 456899999999999999985321 2489999999999999999999
Q ss_pred hhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCC
Q 002801 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (879)
Q Consensus 99 Hs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (879)
|++||+||||||+|||++.++.+|++|||+++........
T Consensus 137 H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------- 176 (288)
T cd05093 137 ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY---------------------------------------- 176 (288)
T ss_pred HhCCeeecccCcceEEEccCCcEEeccCCccccccCCcee----------------------------------------
Confidence 9999999999999999999999999999998653211000
Q ss_pred cccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhH
Q 002801 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (879)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (879)
.......++..|+|||.+.+..++.++|||||
T Consensus 177 ------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwsl 208 (288)
T cd05093 177 ------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 208 (288)
T ss_pred ------------------------------------------------ecCCCCCccccccCHHHhccCCCCchhhHHHH
Confidence 00011245778999999988889999999999
Q ss_pred HHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 259 Gvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||++|||++ ||....... ....+.....++.....++.+.+|+.+||.++|.+|||+.+++.
T Consensus 209 G~il~~l~t~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 209 GVVLWEIFTYGKQPWYQLSNNE-VIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 999999996 564443333 33333333333333456678999999999999999999999854
No 326
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.95 E-value=4.3e-27 Score=256.76 Aligned_cols=205 Identities=16% Similarity=0.103 Sum_probs=156.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|+||||+. ++|.+++.....++++.+++.++.|++.||.|||++||+||||||
T Consensus 68 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p 143 (308)
T cd06634 68 FLQKLRHPNTIQYRG-CYLR--EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA 143 (308)
T ss_pred HHHhCCCCCcccEEE-EEEc--CCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 445567788777665 4443 346799999996 588887755446789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++......
T Consensus 144 ~nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------------- 168 (308)
T cd06634 144 GNILLSEPGLVKLGDFGSASIMAPA------------------------------------------------------- 168 (308)
T ss_pred HhEEECCCCcEEECCcccceeecCc-------------------------------------------------------
Confidence 9999999999999999988542110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell~ 267 (879)
....|+..|+|||.+. ...++.++|||||||++|||++
T Consensus 169 ---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~ 209 (308)
T cd06634 169 ---------------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209 (308)
T ss_pred ---------------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHc
Confidence 1135788899999985 3458899999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchH
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
||.........................+..+.+||.+||..+|.+||++.+++.|||+.....+..
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~~ 278 (308)
T cd06634 210 RKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTV 278 (308)
T ss_pred CCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCChhH
Confidence 765543333222222222222222345567889999999999999999999999999987554443
No 327
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.95 E-value=9.1e-28 Score=260.14 Aligned_cols=202 Identities=18% Similarity=0.200 Sum_probs=150.8
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ ++.+.....+|++|||+.+ +|.+++......+++.+++.++.||+.||+|||++||+|+||||+
T Consensus 58 l~~l~h~ni~~~~~-~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~ 135 (293)
T cd07843 58 LLKLQHPNIVTVKE-VVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTS 135 (293)
T ss_pred HHhcCCCCEEEEEE-EEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHH
Confidence 44456777776655 4444444679999999975 999998665457899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||+++.......
T Consensus 136 nili~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------------ 161 (293)
T cd07843 136 NLLLNNRGILKICDFGLAREYGSPLK------------------------------------------------------ 161 (293)
T ss_pred HEEECCCCcEEEeecCceeeccCCcc------------------------------------------------------
Confidence 99999999999999999866422100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc---
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~--- 267 (879)
......+++.|+|||.+.+.. ++.++|||||||++|||++
T Consensus 162 ------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 205 (293)
T cd07843 162 ------------------------------------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKP 205 (293)
T ss_pred ------------------------------------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCC
Confidence 001135688899999987654 6899999999999999999
Q ss_pred CCCCChhhHhHHhhhcc--------------------c--------CCCchhhc--cChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 PFSTGEEKTRTMSSLRH--------------------R--------VLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~--------------------~--------~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||............... . .....+.. .++.+.++|.+||+.+|++|||+.
T Consensus 206 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ 285 (293)
T cd07843 206 LFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAE 285 (293)
T ss_pred CCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHH
Confidence 55433221111110000 0 00011111 256678999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
|+++||||
T Consensus 286 ell~~~~f 293 (293)
T cd07843 286 DALKHPYF 293 (293)
T ss_pred HHhcCCCC
Confidence 99999998
No 328
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=1.4e-27 Score=257.41 Aligned_cols=200 Identities=18% Similarity=0.138 Sum_probs=153.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------CCCCChhHHHHHHHHHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIV 95 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l 95 (879)
.+...+|++++..++ .+.+. ...++++||+.+++|.+++... ...+++..++.++.|++.||
T Consensus 61 ~~~~l~h~~iv~~~~-~~~~~--~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL 137 (283)
T cd05091 61 MRSRLQHPNIVCLLG-VVTKE--QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGM 137 (283)
T ss_pred HHhcCCCCCcCeEEE-EEcCC--CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHH
Confidence 445567888887776 55433 3579999999999999998321 23578889999999999999
Q ss_pred HhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcccccccccc
Q 002801 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (879)
Q Consensus 96 ~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (879)
+|||++||+||||||+||+++.++.+|++|||+++.........
T Consensus 138 ~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------------ 181 (283)
T cd05091 138 EFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYK------------------------------------ 181 (283)
T ss_pred HHHHHcCccccccchhheEecCCCceEecccccccccccchhee------------------------------------
Confidence 99999999999999999999999999999999987542110000
Q ss_pred CCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcc
Q 002801 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (879)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (879)
......+++.|+|||.+.+..++.++||
T Consensus 182 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 209 (283)
T cd05091 182 ----------------------------------------------------LMGNSLLPIRWMSPEAIMYGKFSIDSDI 209 (283)
T ss_pred ----------------------------------------------------eccCccCCccccCHHHHhcCCCCcchhH
Confidence 0011245778999999988889999999
Q ss_pred hhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 256 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 256 wSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|||||++|||++ ||.... .......+......+.....+..+.+|+.+||+.+|.+||++.++++.
T Consensus 210 ~slG~~l~el~~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 210 WSYGVVLWEVFSYGLQPYCGYS-NQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 999999999997 554433 333444444444444445667778999999999999999999999863
No 329
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.95 E-value=9.5e-28 Score=269.66 Aligned_cols=156 Identities=15% Similarity=0.163 Sum_probs=122.5
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcc
Q 002801 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (879)
Q Consensus 78 ~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (879)
.+++.++..++.||+.||+|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~------------------- 293 (400)
T cd05105 233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY------------------- 293 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccc-------------------
Confidence 4778889999999999999999999999999999999999999999999998653211000
Q ss_pred hhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccc
Q 002801 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (879)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (879)
.......++..
T Consensus 294 ---------------------------------------------------------------------~~~~~~~~~~~ 304 (400)
T cd05105 294 ---------------------------------------------------------------------VSKGSTFLPVK 304 (400)
T ss_pred ---------------------------------------------------------------------cccCCcCCCcc
Confidence 00011356778
Q ss_pred eeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCC
Q 002801 238 YASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
|+|||.+.+..++.++|||||||+||||++ ||............+.....++.....++.+.+++.+||..||++|
T Consensus 305 y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 384 (400)
T cd05105 305 WMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKR 384 (400)
T ss_pred eEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHC
Confidence 999999998889999999999999999985 6654433333344444444444444566788999999999999999
Q ss_pred CCHHHHhh
Q 002801 314 PKMGELLQ 321 (879)
Q Consensus 314 pt~~evl~ 321 (879)
|++.++.+
T Consensus 385 Pt~~~l~~ 392 (400)
T cd05105 385 PSFLHLSD 392 (400)
T ss_pred cCHHHHHH
Confidence 99998875
No 330
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.95 E-value=9.6e-28 Score=257.73 Aligned_cols=200 Identities=14% Similarity=0.079 Sum_probs=151.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------CCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ .+. .....|++|||+.+++|.+++.+.. ..+++..+..++.|++.||+|||+.
T Consensus 62 ~l~~l~~~~iv~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 138 (277)
T cd05062 62 VMKEFNCHHVVRLLG-VVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN 138 (277)
T ss_pred HHHhCCCCCeeeEEE-EEc--CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 344567888877665 443 3346899999999999999985421 2356788999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+|+||||+||+++.++.++++|||+++........
T Consensus 139 ~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------- 175 (277)
T cd05062 139 KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY------------------------------------------- 175 (277)
T ss_pred CcccCCcchheEEEcCCCCEEECCCCCccccCCccee-------------------------------------------
Confidence 9999999999999999999999999998653211000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......++..|+|||.+.+..++.++|||||||+
T Consensus 176 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 210 (277)
T cd05062 176 ---------------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 210 (277)
T ss_pred ---------------------------------------------ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHH
Confidence 00011245778999999998889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+|||++ ||.... .............++.....++.+.+++.+||+.+|++|||+.|++++
T Consensus 211 l~el~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 211 LWEIATLAEQPYQGMS-NEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHHcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999996 664433 233333333333333344566778999999999999999999999864
No 331
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=9.7e-28 Score=240.82 Aligned_cols=207 Identities=17% Similarity=0.247 Sum_probs=163.2
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
..|||-.||.-. |. ..+..+|+|.||+.||+|--++.+. ++++++.++.+..+|+.||.|||++|||.||||..|+
T Consensus 307 asn~pflvglhs--cf-qtesrlffvieyv~ggdlmfhmqrq-rklpeeharfys~ei~lal~flh~rgiiyrdlkldnv 382 (593)
T KOG0695|consen 307 ASNNPFLVGLHS--CF-QTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNV 382 (593)
T ss_pred ccCCCeEEehhh--hh-cccceEEEEEEEecCcceeeehhhh-hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccce
Confidence 357777777665 43 3455789999999999998888554 6899999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
||+..|++|++|+|+|+.--.+ +
T Consensus 383 lldaeghikltdygmcke~l~~----g----------------------------------------------------- 405 (593)
T KOG0695|consen 383 LLDAEGHIKLTDYGMCKEGLGP----G----------------------------------------------------- 405 (593)
T ss_pred EEccCCceeecccchhhcCCCC----C-----------------------------------------------------
Confidence 9999999999999999862111 0
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
-....++|||-|.|||+++|..|++++|+|+|||++|||++ ||.
T Consensus 406 ---------------------------------d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 406 ---------------------------------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred ---------------------------------cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 01245799999999999999999999999999999999999 884
Q ss_pred C------ChhhHhHH--hhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC------HHHHhhcccccCCcCchHHHH
Q 002801 271 T------GEEKTRTM--SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEPRDSMEERE 336 (879)
Q Consensus 271 ~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~evl~hp~~~~~~~~~~e~~ 336 (879)
- .++.+.+. -++..++..|. ..+.++..++...|.+||.+|.. ++++..|+||+.+.....|++
T Consensus 453 ivgm~n~d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk 530 (593)
T KOG0695|consen 453 IVGMDNPDMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQK 530 (593)
T ss_pred eecCCCcccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhc
Confidence 2 12222222 22333333333 44567889999999999999953 689999999998776655543
No 332
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.95 E-value=8.5e-28 Score=255.19 Aligned_cols=200 Identities=17% Similarity=0.131 Sum_probs=158.8
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+.+.+|++++..+. .+. .....|++|||+.|++|.+++... .++++.++..++.||++||.|||++||+|+|||
T Consensus 52 ~~l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~ 127 (258)
T cd05578 52 RILQELNHPFLVNLWY-SFQ--DEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIK 127 (258)
T ss_pred HHHHhCCCCChHHHHH-hhc--CCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 3455678888877666 332 344689999999999999999665 578999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||.+........
T Consensus 128 ~~nil~~~~~~~~l~d~~~~~~~~~~~~---------------------------------------------------- 155 (258)
T cd05578 128 PDNILLDEQGHVHITDFNIATKVTPDTL---------------------------------------------------- 155 (258)
T ss_pred HHHeEEcCCCCEEEeecccccccCCCcc----------------------------------------------------
Confidence 9999999999999999999865321100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 156 ---------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~ 196 (258)
T cd05578 156 ---------------------------------------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGK 196 (258)
T ss_pred ---------------------------------------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCC
Confidence 011356888999999988889999999999999999998
Q ss_pred -CCCCChh--hHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH--HHHhhcccc
Q 002801 268 -PFSTGEE--KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM--GELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~--~evl~hp~~ 325 (879)
||..... .......... ..+..+...++.+.++|.+||..||.+||++ .|+++||||
T Consensus 197 ~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 197 RPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred CCCCCCCccHHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 7754432 2222222221 2233333456789999999999999999999 999999997
No 333
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.94 E-value=1.5e-27 Score=257.79 Aligned_cols=206 Identities=13% Similarity=0.086 Sum_probs=155.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------CCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ .+.+ ....|++|||+.+|+|.+++++.. ..++...+..++.||+.||.|||++
T Consensus 62 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 138 (288)
T cd05061 62 VMKGFTCHHVVRLLG-VVSK--GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 138 (288)
T ss_pred HHHhCCCCCeeeEEE-EEcC--CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 344556777777666 4433 346899999999999999995321 2346678899999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+||+++.++.++++|||+++........
T Consensus 139 ~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~------------------------------------------- 175 (288)
T cd05061 139 KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY------------------------------------------- 175 (288)
T ss_pred CCcCCCCChheEEEcCCCcEEECcCCccccccccccc-------------------------------------------
Confidence 9999999999999999999999999998753211000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......++..|+|||.+.+..++.++|||||||+
T Consensus 176 ---------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~ 210 (288)
T cd05061 176 ---------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 210 (288)
T ss_pred ---------------------------------------------cccCCCcccccccCHHHhccCCCChHhHHHHHHHH
Confidence 00011245677999999988889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh------cccccCC
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ------SEFLNEP 328 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~------hp~~~~~ 328 (879)
+|||++ ||..... ......+.....++.....++.+.+++.+||+.+|++|||+.++++ ||||.+.
T Consensus 211 l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 211 LWEITSLAEQPYQGLSN-EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 999997 6654332 2333333333333333455678999999999999999999999986 8998764
No 334
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.94 E-value=2.6e-27 Score=254.66 Aligned_cols=198 Identities=16% Similarity=0.134 Sum_probs=153.6
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-------------CCCCChhHHHHHHHHHHHHHHhh
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-------------KRSVDVYECLHIFRQIVEIVYAA 98 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-------------~~~l~~~~~~~i~~qi~~~l~~l 98 (879)
+....|++++..++ .+.+ ....|++|||++|++|.++|... ...+++.++..++.||+.||.||
T Consensus 62 l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l 138 (280)
T cd05049 62 LTNFQHENIVKFYG-VCTE--GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL 138 (280)
T ss_pred HHhcCCCCchheee-EEec--CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHH
Confidence 44557788777766 4443 35689999999999999999543 23578899999999999999999
Q ss_pred hhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCC
Q 002801 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (879)
Q Consensus 99 Hs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (879)
|++||+||||||+||+++.++.+|++|||+++........ .
T Consensus 139 H~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~-~-------------------------------------- 179 (280)
T cd05049 139 ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYY-R-------------------------------------- 179 (280)
T ss_pred hhCCeeccccccceEEEcCCCeEEECCcccceecccCcce-e--------------------------------------
Confidence 9999999999999999999999999999998653111000 0
Q ss_pred cccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhH
Q 002801 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (879)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (879)
......++..|+|||++.+..++.++|||||
T Consensus 180 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 210 (280)
T cd05049 180 -------------------------------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSF 210 (280)
T ss_pred -------------------------------------------------cCCCCcccceecChhhhccCCcchhhhHHHH
Confidence 0011245778999999999999999999999
Q ss_pred HHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 259 Gvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||++|||++ ||...... .....+.....++.....+..+.+++.+||..||.+||++.|+++
T Consensus 211 G~il~e~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 211 GVVLWEIFTYGKQPWYGLSNE-EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHHHHHhcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 999999996 76544333 333333444444444456788999999999999999999999975
No 335
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.94 E-value=2.4e-27 Score=256.90 Aligned_cols=195 Identities=16% Similarity=0.156 Sum_probs=151.8
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---------------CCCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---------------PKRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---------------~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
+|++++..++ ++.+ ...+|++|||+.+++|.+++.. ....+++..++.++.||+.||+|||+
T Consensus 74 ~h~~i~~~~~-~~~~--~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~ 150 (293)
T cd05053 74 KHKNIINLLG-VCTQ--EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS 150 (293)
T ss_pred CCCCeeeEEE-EEcC--CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 6888877666 5543 3468999999999999999842 23568999999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
.||+||||||+||+++.++.+|++|||+++.........
T Consensus 151 ~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------------- 189 (293)
T cd05053 151 KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYR----------------------------------------- 189 (293)
T ss_pred CCccccccceeeEEEcCCCeEEeCcccccccccccccee-----------------------------------------
Confidence 999999999999999999999999999997642110000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||.+.+..++.++|||||||
T Consensus 190 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 222 (293)
T cd05053 190 -----------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 222 (293)
T ss_pred -----------------------------------------------ccCCCCCCccccCHHHhccCCcCcccceeehhh
Confidence 001113356799999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
++|||++ ||.... .......+.....++.....+..+.+|+.+||..+|.+|||+.+++++
T Consensus 223 il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 223 LLWEIFTLGGSPYPGIP-VEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHhcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 9999986 664433 233334444444444445567889999999999999999999999874
No 336
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.94 E-value=1e-27 Score=265.09 Aligned_cols=212 Identities=16% Similarity=0.167 Sum_probs=153.3
Q ss_pred ceeecccccccCCCCCCcccccc---cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 29 GVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
...+...+|++++..++ ++... ....+|++|||+. ++|.++++. ..+++..++.++.||+.||+|||++||+|
T Consensus 54 ~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~ivH 129 (336)
T cd07849 54 IKILRRFKHENIIGILD-IIRPPSFESFNDVYIVQELME-TDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVLH 129 (336)
T ss_pred HHHHHhCCCCCcCchhh-eeecccccccceEEEEehhcc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 33445556788777665 43322 2235799999996 488888854 46899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+||+++..+.+|++|||+++.........
T Consensus 130 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~---------------------------------------------- 163 (336)
T cd07849 130 RDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT---------------------------------------------- 163 (336)
T ss_pred cCCCHHHEEECCCCCEEECcccceeecccccccc----------------------------------------------
Confidence 9999999999999999999999986532110000
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~e 264 (879)
.......||+.|+|||.+.+ ..++.++|||||||++||
T Consensus 164 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~e 202 (336)
T cd07849 164 -----------------------------------------GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAE 202 (336)
T ss_pred -----------------------------------------CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHH
Confidence 00022478999999998765 458999999999999999
Q ss_pred hhc---CCCCChhhHhHH--hhhcc------------------------cCC---CchhhccChhhHHHHHHhcCCCCCC
Q 002801 265 LFC---PFSTGEEKTRTM--SSLRH------------------------RVL---PPQLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~--~~~~~------------------------~~~---~~~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
|++ ||.......... ..+.. ... .......++.+.+|+.+||+.+|.+
T Consensus 203 l~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 282 (336)
T cd07849 203 MLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHK 282 (336)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhh
Confidence 999 664332111000 00000 000 0011234677889999999999999
Q ss_pred CCCHHHHhhcccccCCcCc
Q 002801 313 RPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~~~~ 331 (879)
|||+.++++||||.....+
T Consensus 283 Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 283 RITVEEALAHPYLEQYHDP 301 (336)
T ss_pred CcCHHHHhcCccccccCCC
Confidence 9999999999999876543
No 337
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.94 E-value=3.9e-27 Score=252.97 Aligned_cols=199 Identities=15% Similarity=0.176 Sum_probs=154.3
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
..|++++..++ .+.+ ....|++|||+.|++|.++++.. .+++..++.++.||+.||.|||+.||+|+||+|+||+
T Consensus 59 ~~~~~vi~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~ 133 (277)
T cd06917 59 SQPPNITKYYG-SYLK--GPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANIL 133 (277)
T ss_pred CCCCCeeeEee-eeee--CCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEE
Confidence 35788877665 4433 44689999999999999998553 6899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.++++|||++........
T Consensus 134 i~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------------- 156 (277)
T cd06917 134 VTNTGNVKLCDFGVAALLNQNSS--------------------------------------------------------- 156 (277)
T ss_pred EcCCCCEEEccCCceeecCCCcc---------------------------------------------------------
Confidence 99999999999999865421100
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc---CCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......|+..|+|||.+.+. .++.++|||||||++|+|++ ||.
T Consensus 157 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 203 (277)
T cd06917 157 ---------------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYS 203 (277)
T ss_pred ---------------------------------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCC
Confidence 00123678899999998754 47999999999999999999 775
Q ss_pred CChhhHhHHhhhcccCCCchhh-ccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 271 TGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
........ ..+.....+.... ..+..+.+++.+||..||.+||++.+++.||||....
T Consensus 204 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 204 DVDAFRAM-MLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred CCChhhhh-hccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 44332222 2222222222212 2567788999999999999999999999999997654
No 338
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.94 E-value=2.9e-27 Score=256.39 Aligned_cols=199 Identities=16% Similarity=0.222 Sum_probs=146.4
Q ss_pred ccccCCCCCCccccccc---ccCceEEEEeeCCcchhhhhcCC----CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 36 DHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~---~~~~~lv~e~~~g~sL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
+|++++..++ ++.... ....|++|||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||
T Consensus 59 ~~~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl 136 (295)
T cd07837 59 ESIYIVRLLD-VEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDL 136 (295)
T ss_pred CCCCccceee-eEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 4566666555 333221 2237999999986 898887432 245899999999999999999999999999999
Q ss_pred CCcceeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 109 RPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 109 KP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||+||+++. ++.+|++|||+++.......
T Consensus 137 ~~~nil~~~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------------- 166 (295)
T cd07837 137 KPQNLLVDKQKGLLKIADLGLGRAFSIPVK-------------------------------------------------- 166 (295)
T ss_pred ChHHEEEecCCCeEEEeecccceecCCCcc--------------------------------------------------
Confidence 999999998 88999999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell 266 (879)
..+...++++|+|||.+.+. .++.++|||||||++|||+
T Consensus 167 ----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 206 (295)
T cd07837 167 ----------------------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS 206 (295)
T ss_pred ----------------------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHH
Confidence 00112568889999988764 4799999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc---------------------C-CCc----hhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 267 C---PFSTGEEKTRTMSSLRHR---------------------V-LPP----QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~---------------------~-~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
+ ||................ . .+. .....++.+.+||.+||.+||.+||++.
T Consensus 207 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~ 286 (295)
T cd07837 207 RKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAK 286 (295)
T ss_pred cCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHH
Confidence 9 665543333222211100 0 000 1123567788999999999999999999
Q ss_pred HHhhccccc
Q 002801 318 ELLQSEFLN 326 (879)
Q Consensus 318 evl~hp~~~ 326 (879)
|++.||||+
T Consensus 287 eil~~~~~~ 295 (295)
T cd07837 287 AALTHPYFD 295 (295)
T ss_pred HHhcCCCcC
Confidence 999999985
No 339
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.94 E-value=1.9e-27 Score=253.10 Aligned_cols=212 Identities=17% Similarity=0.184 Sum_probs=159.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+..|++++..+. .+. .....|++|||+.|++|.+++.+. +.+++.+++.++.||+.||+|||++||+|+||+|
T Consensus 46 ~l~~~~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~ 121 (265)
T cd05579 46 ILSQAQSPYVVKLYY-SFQ--GKKNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKP 121 (265)
T ss_pred HHHhCCCcchhHHHH-hee--cCcEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCH
Confidence 344456777777655 332 345689999999999999999654 3789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++.......... .
T Consensus 122 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~------------------------------------------------- 151 (265)
T cd05579 122 DNILIDSNGHLKLTDFGLSKVGLVRRQIN-L------------------------------------------------- 151 (265)
T ss_pred HHeEEcCCCCEEEEecccchhcccCcccc-c-------------------------------------------------
Confidence 99999999999999999986532110000 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
...........++..|+|||.+.+..++.++|||||||++|||++
T Consensus 152 --------------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~ 199 (265)
T cd05579 152 --------------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIP 199 (265)
T ss_pred --------------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCC
Confidence 000000122467888999999988889999999999999999998
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH---HHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~evl~hp~~~~~ 328 (879)
||..................++.....++.+.+++.+||+.+|.+|||+ .+++.||||+..
T Consensus 200 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 200 PFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred CCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 7755443332222222222223322346788999999999999999999 999999999864
No 340
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.94 E-value=9.8e-27 Score=223.95 Aligned_cols=267 Identities=16% Similarity=0.236 Sum_probs=225.1
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
+++..|+.--+-+-.++.-+ |++.||.++|++..++.+...-|+++.|-+-+|||.-++.. +..+.|
T Consensus 33 isa~kd~~pmlr~g~tgdwi-----gtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgde--------lhsf~h 99 (334)
T KOG0278|consen 33 ISASKDGKPMLRNGDTGDWI-----GTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDE--------LHSFEH 99 (334)
T ss_pred EEeccCCCchhccCCCCCcE-----EeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhh--------hhhhhh
Confidence 66666766655555555444 45669999999999999999999999999999999876422 234568
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe-EEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCce
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVS 695 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~-~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~ 695 (879)
+..|..++|+. +.++|++|+.+..++|||++..+ +..++.+|.+.|..+-|-. ..+.++++++|++|++||.+++..
T Consensus 100 khivk~~af~~-ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~-eD~~iLSSadd~tVRLWD~rTgt~ 177 (334)
T KOG0278|consen 100 KHIVKAVAFSQ-DSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCH-EDKCILSSADDKTVRLWDHRTGTE 177 (334)
T ss_pred hheeeeEEecc-cchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEec-cCceEEeeccCCceEEEEeccCcE
Confidence 88999999997 58999999999999999998764 5678899999999999998 678888889999999999999999
Q ss_pred EEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEec
Q 002801 696 IGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDL 774 (879)
Q Consensus 696 i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~ 774 (879)
++++..+.+|+++-++++ |++|.+ ...+.|.+||..+... ++.+... ..|.+...+ +...+++|+.|..++.||.
T Consensus 178 v~sL~~~s~VtSlEvs~d-G~ilTi-a~gssV~Fwdaksf~~-lKs~k~P-~nV~SASL~P~k~~fVaGged~~~~kfDy 253 (334)
T KOG0278|consen 178 VQSLEFNSPVTSLEVSQD-GRILTI-AYGSSVKFWDAKSFGL-LKSYKMP-CNVESASLHPKKEFFVAGGEDFKVYKFDY 253 (334)
T ss_pred EEEEecCCCCcceeeccC-CCEEEE-ecCceeEEeccccccc-eeeccCc-cccccccccCCCceEEecCcceEEEEEec
Confidence 999999999999999999 766554 5567899999998773 6655432 357777777 7789999999999999999
Q ss_pred CCCcccccCCceEEE-eCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCc
Q 002801 775 SMCTSRVIDTPLHSF-TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 828 (879)
Q Consensus 775 ~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~ 828 (879)
.++ ..+..+ ++|.++|-||.|+|+|...|+||+||+|++|....++.-
T Consensus 254 ~Tg------eEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 254 NTG------EEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred cCC------ceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 998 556665 899999999999999999999999999999998766544
No 341
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.94 E-value=2.8e-27 Score=251.95 Aligned_cols=205 Identities=22% Similarity=0.265 Sum_probs=156.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .+. .....|+++||+++++|.+++.+. ..+++.+++.|+.||+.||.|||+.||+|+||||
T Consensus 52 ~~~~l~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~ 127 (264)
T cd06626 52 VLELLKHPNLVKYYG-VEV--HREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKP 127 (264)
T ss_pred HHHhCCCCChhheee-eEe--cCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 445567787777666 332 345689999999999999999654 4579999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++............
T Consensus 128 ~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~------------------------------------------------- 158 (264)
T cd06626 128 ANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE------------------------------------------------- 158 (264)
T ss_pred HHEEECCCCCEEEcccccccccCCCCCcccc-------------------------------------------------
Confidence 9999999999999999998764222100000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC---CCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvil~ell~ 267 (879)
......++..|+|||.+.+.. ++.++|||||||++|||++
T Consensus 159 -------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~ 201 (264)
T cd06626 159 -------------------------------------EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT 201 (264)
T ss_pred -------------------------------------cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHh
Confidence 001135688899999998766 8999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||............+.....+ |......+.+.+++.+||+.+|.+||++.+++.|||+
T Consensus 202 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 202 GKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred CCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 775543332222222222222 2222346788999999999999999999999999996
No 342
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.94 E-value=2.2e-27 Score=253.07 Aligned_cols=207 Identities=16% Similarity=0.113 Sum_probs=160.4
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
...+.+.+|++++..++ .+.+......|++|||+.|++|.+++... ..+++..++.++.||+.||.|||++||+|+||
T Consensus 55 i~~l~~l~h~~i~~~~~-~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl 132 (264)
T cd06653 55 IQLLKNLRHDRIVQYYG-CLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSNMIVHRDI 132 (264)
T ss_pred HHHHHHcCCCCcceEEE-EEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence 33455667888887666 44444445688999999999999998654 45899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||+++........ .
T Consensus 133 ~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-~------------------------------------------------ 163 (264)
T cd06653 133 KGANILRDSAGNVKLGDFGASKRIQTICMS-G------------------------------------------------ 163 (264)
T ss_pred CHHHEEEcCCCCEEECcccccccccccccc-C------------------------------------------------
Confidence 999999999999999999998763211000 0
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 205 (264)
T cd06653 164 --------------------------------------TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTE 205 (264)
T ss_pred --------------------------------------ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhC
Confidence 00012467889999999988889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..................+..+...++.+.+++.+||. +|..||++.+++.|||+
T Consensus 206 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 206 KPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred CCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 7755444444444333333333444566789999999999 57999999999999985
No 343
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.94 E-value=2.9e-27 Score=253.54 Aligned_cols=191 Identities=17% Similarity=0.193 Sum_probs=144.5
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|+|++..++ +|.+. ...|+||||+++++|..++.+....+++..++.++.||+.||+|||++||+||||||+
T Consensus 70 ~~~l~h~niv~~~~-~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~ 146 (274)
T cd05076 70 MSQVSHIHLAFVHG-VCVRG--SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAK 146 (274)
T ss_pred HhcCCCCCeeeEEE-EEEeC--CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcc
Confidence 44567888887776 66543 4679999999999999999765567899999999999999999999999999999999
Q ss_pred ceeeccCC-------CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 112 CFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 112 NIll~~~~-------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
|||++..+ .+|++|||++......
T Consensus 147 Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------------------------------------------------- 177 (274)
T cd05076 147 NILLARLGLAEGTSPFIKLSDPGVSFTALSR------------------------------------------------- 177 (274)
T ss_pred cEEEeccCcccCccceeeecCCccccccccc-------------------------------------------------
Confidence 99997644 3789999987432100
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ 263 (879)
....++..|+|||.+.+ ..++.++|||||||++|
T Consensus 178 ---------------------------------------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~ 212 (274)
T cd05076 178 ---------------------------------------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLL 212 (274)
T ss_pred ---------------------------------------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHH
Confidence 11245777999999876 45899999999999999
Q ss_pred Hhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 264 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 264 ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||++ ||........ ..........+ ....+.+.++|.+||..+|++||++.+++++
T Consensus 213 el~~~g~~p~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 213 EICFDGEVPLKERTPSEK-ERFYEKKHRLP--EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHhCCCCCccccChHHH-HHHHHhccCCC--CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 9963 6644322211 11111111111 1234678899999999999999999999874
No 344
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.94 E-value=2.2e-27 Score=254.88 Aligned_cols=200 Identities=14% Similarity=0.140 Sum_probs=150.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC------CCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~------~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
.+...+|++++..++ ++.+ ....|++|||+.|++|.+++.... ..+++..++.++.||+.||.|||++||+
T Consensus 62 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 138 (277)
T cd05036 62 IMSKFNHQNIVRLIG-VSFE--RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFI 138 (277)
T ss_pred HHHhCCCCCEeeEEE-EEcc--CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 344567888877666 4433 345799999999999999985432 2588999999999999999999999999
Q ss_pred cccCCCcceeeccCC---CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 105 VHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 105 HrDlKP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||||||+||+++..+ .+|++|||+++.........
T Consensus 139 H~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------------ 176 (277)
T cd05036 139 HRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYR------------------------------------------ 176 (277)
T ss_pred ecccchheEEEeccCCCcceEeccCccccccCCcccee------------------------------------------
Confidence 999999999998654 58999999997641110000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......+..|+|||++.+..++.++|||||||+
T Consensus 177 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i 210 (277)
T cd05036 177 ----------------------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVL 210 (277)
T ss_pred ----------------------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHH
Confidence 0001133567999999998889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+|||++ ||...... ..+..+.....++.+...++.+.+++.+||..+|++||++.++++|
T Consensus 211 l~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 211 LWEIFSLGYMPYPGRTNQ-EVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999996 77543332 2233332222233334556788999999999999999999999986
No 345
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.94 E-value=1.4e-27 Score=261.64 Aligned_cols=207 Identities=19% Similarity=0.181 Sum_probs=151.0
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC----CCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~----~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
..+...+|++++..++ .+.+......|+||||+++ +|.+++.. ....+++..++.|+.||+.||+|||++||+|
T Consensus 54 ~~l~~l~h~~i~~~~~-~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h 131 (316)
T cd07842 54 ALLRELKHENVVSLVE-VFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLH 131 (316)
T ss_pred HHHHhcCCCCccceEE-EEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 3455667888887776 5655545678999999965 67776632 2236899999999999999999999999999
Q ss_pred ccCCCcceeecc----CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 106 HNVRPSCFVMSS----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 106 rDlKP~NIll~~----~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
|||||+||+++. .+.+|++|||+++........
T Consensus 132 ~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------- 168 (316)
T cd07842 132 RDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP------------------------------------------- 168 (316)
T ss_pred CCCCHHHEEEcCCCCccceEEECCCccccccCCCccc-------------------------------------------
Confidence 999999999999 899999999998764221000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 260 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGv 260 (879)
........++.+|+|||++.+. .++.++|||||||
T Consensus 169 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 204 (316)
T cd07842 169 --------------------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGC 204 (316)
T ss_pred --------------------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHH
Confidence 0001224678999999988774 4899999999999
Q ss_pred HHHHhhc---CCCCChhhH--------hHH----hhh------------------------cccCCC-c-------hhhc
Q 002801 261 LLFELFC---PFSTGEEKT--------RTM----SSL------------------------RHRVLP-P-------QLLL 293 (879)
Q Consensus 261 il~ell~---pf~~~~~~~--------~~~----~~~------------------------~~~~~~-~-------~~~~ 293 (879)
+||||++ ||....... ..+ ..+ .....+ . ....
T Consensus 205 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (316)
T cd07842 205 IFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKK 284 (316)
T ss_pred HHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccC
Confidence 9999999 664332211 000 000 000000 0 0013
Q ss_pred cChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 294 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 294 ~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
....+.+++.+||..||++|||+.|+++||||
T Consensus 285 ~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 285 PDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 44568899999999999999999999999998
No 346
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=1.9e-27 Score=256.19 Aligned_cols=200 Identities=21% Similarity=0.170 Sum_probs=154.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC----------------CCCCChhHHHHHHHHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----------------KRSVDVYECLHIFRQIVEI 94 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----------------~~~l~~~~~~~i~~qi~~~ 94 (879)
.+....|++++..++ .+. .....|++|||+.+++|.+++... ...+++.+++.++.||+.|
T Consensus 60 ~l~~l~h~niv~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a 136 (283)
T cd05090 60 LMAELHHPNIVCLLG-VVT--QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAG 136 (283)
T ss_pred HHhhCCCCCeeeEEE-EEe--cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHH
Confidence 445567788877665 333 234679999999999999998421 1247888999999999999
Q ss_pred HHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccc
Q 002801 95 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (879)
Q Consensus 95 l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (879)
|.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 137 l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------------ 180 (283)
T cd05090 137 MEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYY------------------------------------ 180 (283)
T ss_pred HHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcce------------------------------------
Confidence 99999999999999999999999999999999998764211000
Q ss_pred cCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCc
Q 002801 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254 (879)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sD 254 (879)
.......++..|+|||.+.+..++.++|
T Consensus 181 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 208 (283)
T cd05090 181 ----------------------------------------------------RVQPKSLLPIRWMPPEAIMYGKFSSDSD 208 (283)
T ss_pred ----------------------------------------------------ecccCCCccceecChHHhccCCCCchhh
Confidence 0001124567799999998888999999
Q ss_pred chhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 255 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 255 IwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||||||+||||++ ||.... ....+..+.....++.....++.+.+++.+||..||.+||++.+++++
T Consensus 209 v~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 209 IWSFGVVLWEIFSFGLQPYYGFS-NQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred hHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 9999999999997 665443 334455555554555555677889999999999999999999999864
No 347
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.94 E-value=1.9e-27 Score=255.50 Aligned_cols=204 Identities=17% Similarity=0.159 Sum_probs=155.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..+. .+. .....|++|||++|++|.+++.+.. ..+++.+++.++.||+.||.|||++||+|+|||
T Consensus 46 ~l~~l~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~ 122 (277)
T cd05577 46 ILEKVSSRFIVSLAY-AFE--TKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLK 122 (277)
T ss_pred HHHhCCCCCEeeeee-EEe--cCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 344556777777655 333 2346899999999999999985432 368999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||.+.......
T Consensus 123 p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------------- 149 (277)
T cd05577 123 PENVLLDDHGNVRISDLGLAVELKGGK----------------------------------------------------- 149 (277)
T ss_pred HHHEEECCCCCEEEccCcchhhhccCC-----------------------------------------------------
Confidence 999999999999999999886531100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 150 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~ 191 (277)
T cd05577 150 --------------------------------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191 (277)
T ss_pred --------------------------------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCC
Confidence 0011256778999999988889999999999999999999
Q ss_pred -CCCCChhh---HhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 -PFSTGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||...... ........ ....+.....++.+.++|.+||+.+|.+|| ++.+++.||||....
T Consensus 192 ~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 192 SPFRQRKEKVEKEELKRRTL-EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred CCCCCCcccccHHHHHhccc-cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 77543321 11111111 111222234567899999999999999999 888899999998644
No 348
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=6.9e-28 Score=259.71 Aligned_cols=254 Identities=13% Similarity=0.124 Sum_probs=167.3
Q ss_pred ccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 22 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
+.+.||++ |+-.+..-+|.+|. .+.| ...+|+||+|+.||++-.+|-+- +-|++..++.|+.++.+|+++.|..
T Consensus 675 HVKAERDI--LAEADn~WVVrLyy-SFQD--kdnLYFVMdYIPGGDmMSLLIrm-gIFeE~LARFYIAEltcAiesVHkm 748 (1034)
T KOG0608|consen 675 HVKAERDI--LAEADNEWVVRLYY-SFQD--KDNLYFVMDYIPGGDMMSLLIRM-GIFEEDLARFYIAELTCAIESVHKM 748 (1034)
T ss_pred hhhhhhhh--HhhcCCcceEEEEE-Eecc--CCceEEEEeccCCccHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 44556664 34445556666666 3333 44689999999999999998554 5789999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
|+|||||||+||||+.+|++||+|||+|.-+.... + .| .+..
T Consensus 749 GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH-d----------------------sk--YYq~------------- 790 (1034)
T KOG0608|consen 749 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH-D----------------------SK--YYQE------------- 790 (1034)
T ss_pred cceecccCccceEEccCCceeeeeccccccceecc-c----------------------cc--cccC-------------
Confidence 99999999999999999999999999997642110 0 00 0000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.++....+.... -.+.+...+.|.+.++ ..++..-...-.++||+-|+|||++....|+..+|+||.|||
T Consensus 791 gdH~RqDSmep~---~e~~d~~~~lkvL~~r-------a~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 791 GDHHRQDSMEPS---PEWADISKCLKVLERR-------AMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred CCccccccCCCc---hhhccccccchHHHHH-------HHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 000000000000 0000011111222211 111111112235799999999999999999999999999999
Q ss_pred HHHhhc---CCCCChhhHhHHhhhcc--cCCCchhhccChhhHHHHHHhcCCCCCCCC---CHHHHhhcccccCCcC
Q 002801 262 LFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPRD 330 (879)
Q Consensus 262 l~ell~---pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~evl~hp~~~~~~~ 330 (879)
||||+. ||.........+..+.- ..-.+.-.+.++++.++|.+++ .+++.|. .+++|..||||+.+.-
T Consensus 861 l~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDF 936 (1034)
T ss_pred HHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccch
Confidence 999998 77554444433333222 2223344567788899998854 4567774 4678999999998653
No 349
>PTZ00420 coronin; Provisional
Probab=99.94 E-value=7.3e-25 Score=249.62 Aligned_cols=254 Identities=14% Similarity=0.178 Sum_probs=191.7
Q ss_pred ccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEecCcccCcCcccccce-EEecc
Q 002801 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMAS 616 (879)
Q Consensus 539 ~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspd-g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~-~~~~~ 616 (879)
|..++.+++|+..+...... +.+|.+.|.+++|+|+ +.+||||+.|++|+||++............++ ....|
T Consensus 50 GG~~gvI~L~~~~r~~~v~~-----L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH 124 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIK-----LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH 124 (568)
T ss_pred CCceeEEEeeecCCCceEEE-----EcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecC
Confidence 45678899998776554433 4589999999999996 78999999999999999975321111111122 23458
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceE
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i 696 (879)
...|.+++|+|.....|++++.||+|+|||+.+++.+..+. |...|.+++|+| ++.+|++++.|++|+|||+++++.+
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~Slswsp-dG~lLat~s~D~~IrIwD~Rsg~~i 202 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNI-KGNLLSGTCVGKHMHIIDPRKQEIA 202 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECC-CCCEEEEEecCCEEEEEECCCCcEE
Confidence 88999999999745567899999999999999998877775 667899999999 9999999999999999999999999
Q ss_pred EEEecCCc-e-----EEEEeeCCCCCEEEEEeCCC----eEEEEEcCCCceeeEEEccCC--CCEEEEEEc-CCCEEEEE
Q 002801 697 GTIKTKAN-V-----CCVQFPLDSGRSLAFGSADH----RIYYYDLRNSKIPLCTLIGHN--KTVSYVKFV-DATTLVSA 763 (879)
Q Consensus 697 ~~~~~~~~-v-----~~v~~~p~~~~~l~tgs~d~----~I~iwDl~~~~~~~~~~~~h~--~~V~~v~fs-~~~~l~s~ 763 (879)
.++..+.. + ....|+++ +.+|++++.|+ +|++||+++...++..+..+. ..+...-.. ++.++++|
T Consensus 203 ~tl~gH~g~~~s~~v~~~~fs~d-~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsG 281 (568)
T PTZ00420 203 SSFHIHDGGKNTKNIWIDGLGGD-DNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIG 281 (568)
T ss_pred EEEecccCCceeEEEEeeeEcCC-CCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEE
Confidence 88875432 2 23345577 67888877764 799999997665676654333 333333334 68899999
Q ss_pred EcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCC
Q 002801 764 STDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD 805 (879)
Q Consensus 764 s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 805 (879)
+.|++|++|++..+.. ..+..+. +..+...++|.|..
T Consensus 282 kGD~tIr~~e~~~~~~----~~l~~~~-s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 282 KGDGNCRYYQHSLGSI----RKVNEYK-SCSPFRSFGFLPKQ 318 (568)
T ss_pred ECCCeEEEEEccCCcE----Eeecccc-cCCCccceEEcccc
Confidence 9999999999986522 2333433 56678889999964
No 350
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.94 E-value=1.4e-27 Score=258.32 Aligned_cols=201 Identities=14% Similarity=0.221 Sum_probs=149.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++. .....|+||||+.+ +|.+++.+....+++..++.++.||+.||.|||++||+||||||
T Consensus 56 ~l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p 131 (291)
T cd07844 56 LLKDLKHANIVTLHD-IIH--TKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKP 131 (291)
T ss_pred HHhhCCCcceeeEEE-EEe--cCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCH
Confidence 445567888877666 443 33478999999975 99999966556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++....+..
T Consensus 132 ~nil~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------------- 158 (291)
T cd07844 132 QNLLISERGELKLADFGLARAKSVPSK----------------------------------------------------- 158 (291)
T ss_pred HHEEEcCCCCEEECccccccccCCCCc-----------------------------------------------------
Confidence 999999999999999999854211100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+ ..++.++|||||||++|||++
T Consensus 159 -------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~ 201 (291)
T cd07844 159 -------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGR 201 (291)
T ss_pred -------------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCC
Confidence 0011245778999999876 458999999999999999998
Q ss_pred -CCCCChhhHhHHhhh----cc--------------------cCC-Cch----hhccC--hhhHHHHHHhcCCCCCCCCC
Q 002801 268 -PFSTGEEKTRTMSSL----RH--------------------RVL-PPQ----LLLKF--PKEASFCLWLLHPEPSGRPK 315 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~----~~--------------------~~~-~~~----~~~~~--~~~~~li~~~L~~dP~~Rpt 315 (879)
||............+ .. ... +.. ..... ..+.+++.+||+++|.+|||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps 281 (291)
T cd07844 202 PLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS 281 (291)
T ss_pred CCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC
Confidence 664433111111100 00 000 000 01122 66779999999999999999
Q ss_pred HHHHhhcccc
Q 002801 316 MGELLQSEFL 325 (879)
Q Consensus 316 ~~evl~hp~~ 325 (879)
+.++++||||
T Consensus 282 ~~e~l~~~~f 291 (291)
T cd07844 282 AAEAMKHPYF 291 (291)
T ss_pred HHHHhcCCCC
Confidence 9999999998
No 351
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.94 E-value=3.2e-27 Score=250.60 Aligned_cols=203 Identities=15% Similarity=0.059 Sum_probs=154.3
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
+...+...+|++++..++ .+.+ ..+|++|||+++++|.+++.... ..+++..++.++.||+.||.|||++||+|+
T Consensus 46 e~~~l~~l~h~~iv~~~~-~~~~---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 121 (257)
T cd05040 46 EAAIMHSLDHENLIRLYG-VVLT---HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHR 121 (257)
T ss_pred HHHHHhhcCCCCccceeE-EEcC---CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 334456667888877666 4443 57899999999999999996544 568999999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||||+||+++.++.+|++|||+++..........
T Consensus 122 di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~---------------------------------------------- 155 (257)
T cd05040 122 DLAARNILLASDDKVKIGDFGLMRALPQNEDHYV---------------------------------------------- 155 (257)
T ss_pred ccCcccEEEecCCEEEecccccccccccccccee----------------------------------------------
Confidence 9999999999999999999999876422100000
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell 266 (879)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 156 -----------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~ 194 (257)
T cd05040 156 -----------------------------------------MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMF 194 (257)
T ss_pred -----------------------------------------cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHH
Confidence 000124577899999998888999999999999999998
Q ss_pred c----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+ ||...................+.....+..+.+++.+||..+|++||++.++++
T Consensus 195 t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 195 TYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred hCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 6 664433332222222122222233345678889999999999999999999976
No 352
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.94 E-value=4.8e-27 Score=257.43 Aligned_cols=200 Identities=16% Similarity=0.128 Sum_probs=155.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||+.| +|.+++.....++++.++..++.||+.||.|||++||+||||||
T Consensus 78 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p 153 (317)
T cd06635 78 FLQRIKHPNSIEYKG-CYLR--EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKA 153 (317)
T ss_pred HHHhCCCCCEEEEEE-EEee--CCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCc
Confidence 445567888877666 5543 3357999999975 78787755556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++......
T Consensus 154 ~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------------- 178 (317)
T cd06635 154 GNILLTEPGQVKLADFGSASIASPA------------------------------------------------------- 178 (317)
T ss_pred ccEEECCCCCEEEecCCCccccCCc-------------------------------------------------------
Confidence 9999999999999999987542110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell~ 267 (879)
....|+..|+|||.+. +..++.++|||||||++|||++
T Consensus 179 ---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~ 219 (317)
T cd06635 179 ---------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 219 (317)
T ss_pred ---------------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHh
Confidence 1136788899999974 3558999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||..................+......++.+.+++.+||+.+|.+||++.++++|+|+-..
T Consensus 220 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 220 RKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred CCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 7765543333333333332222333455678999999999999999999999999998653
No 353
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.94 E-value=2e-27 Score=252.37 Aligned_cols=190 Identities=16% Similarity=0.163 Sum_probs=145.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .|.. ...|++|||+.+++|.+++.+....+++..++.+++||+.||+|||++||+||||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp 129 (259)
T cd05037 54 LMSQLSHKHLVKLYG-VCVR---DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCG 129 (259)
T ss_pred HHHcCCCcchhheee-EEec---CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCcc
Confidence 345567888877666 4543 457999999999999999976555789999999999999999999999999999999
Q ss_pred cceeeccCC-------CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 111 SCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 111 ~NIll~~~~-------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+|||++..+ .+|++|||++......
T Consensus 130 ~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~------------------------------------------------ 161 (259)
T cd05037 130 KNILVARYGLNEGYVPFIKLSDPGIPITVLSR------------------------------------------------ 161 (259)
T ss_pred ceEEEecCccccCCceeEEeCCCCcccccccc------------------------------------------------
Confidence 999999887 7999999998653110
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC--CCCccCcchhHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVL 261 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvi 261 (879)
....++..|+|||.+.+. .++.++|||||||+
T Consensus 162 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~ 195 (259)
T cd05037 162 ----------------------------------------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTT 195 (259)
T ss_pred ----------------------------------------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence 012456679999999876 68999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||++ ||...... ............+. .....+.+++.+||..+|.+|||+.++++
T Consensus 196 ~~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 196 LLEICSNGEEPLSTLSSS-EKERFYQDQHRLPM--PDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHHhCCCCCcccCCch-hHHHHHhcCCCCCC--CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999987 44333211 11111111111111 12267889999999999999999999986
No 354
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.94 E-value=2.1e-27 Score=255.91 Aligned_cols=201 Identities=17% Similarity=0.081 Sum_probs=150.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .|........|++|||+.+++|.+++... .+++.+++.++.|++.||+|||++||+||||||
T Consensus 59 ~l~~l~h~~i~~~~~-~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp 135 (283)
T cd05080 59 ILKTLYHENIVKYKG-CCSEQGGKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAA 135 (283)
T ss_pred HHHhCCCCCEeeEEE-EEecCCCceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccCh
Confidence 445567888877666 55544455689999999999999999553 589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+|++|||+++..........
T Consensus 136 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~-------------------------------------------------- 165 (283)
T cd05080 136 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-------------------------------------------------- 165 (283)
T ss_pred heEEEcCCCcEEEeecccccccCCcchhhc--------------------------------------------------
Confidence 999999999999999999876421100000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 -------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~ 208 (283)
T cd05080 166 -------------------------------------VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCD 208 (283)
T ss_pred -------------------------------------cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCC
Confidence 0001134567999999988889999999999999999998
Q ss_pred CCCCChhhHhHH--------------hhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEKTRTM--------------SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.........+ ..+.....++.....+..+.+++.+||..+|++|||+.++++
T Consensus 209 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 209 SKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred CCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 653322111100 011111122223345678899999999999999999999985
No 355
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.94 E-value=2.8e-27 Score=253.29 Aligned_cols=202 Identities=15% Similarity=0.093 Sum_probs=152.4
Q ss_pred eecccccccCCCCCCccccc----ccccCceEEEEeeCCcchhhhhcC-----CCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~lv~e~~~g~sL~~~l~~-----~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ .|.. .....++++|||+.+++|.+++.. ....+++..++.++.||+.||+|||++
T Consensus 53 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 131 (272)
T cd05075 53 CMKEFDHPNVMRLIG-VCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK 131 (272)
T ss_pred HHHhCCCCCcceEEE-EEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345567888877665 4432 122357999999999999998721 224589999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+|||++.++.+|++|||+++........
T Consensus 132 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------- 168 (272)
T cd05075 132 SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY------------------------------------------- 168 (272)
T ss_pred CeeccccchhheEEcCCCCEEECCCCcccccCcccce-------------------------------------------
Confidence 9999999999999999999999999998764211000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......+++.|+|||.+.+..++.++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~i 203 (272)
T cd05075 169 ---------------------------------------------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVT 203 (272)
T ss_pred ---------------------------------------------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHH
Confidence 00011234667999999998889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+|||++ ||.... .......+.....++.....+..+.+++.+||..+|.+|||+.+++++
T Consensus 204 l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 204 MWEIATRGQTPYPGVE-NSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHHcCCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999987 664433 333334444443334444566778999999999999999999999863
No 356
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.94 E-value=4.4e-27 Score=255.31 Aligned_cols=192 Identities=13% Similarity=0.096 Sum_probs=148.2
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------CCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
+|++++..++ .+.+ ...+|++|||+++++|.+++.+.. ..+++..++.|+.||+.||+|||+
T Consensus 61 ~hp~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~ 137 (297)
T cd05089 61 HHPNIINLLG-ACEN--RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE 137 (297)
T ss_pred CCCchhheEE-EEcc--CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5788877666 4433 346899999999999999995421 257889999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+|||++.++.+|++|||++...... .
T Consensus 138 ~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-----~--------------------------------------- 173 (297)
T cd05089 138 KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY-----V--------------------------------------- 173 (297)
T ss_pred CCcccCcCCcceEEECCCCeEEECCcCCCccccce-----e---------------------------------------
Confidence 99999999999999999999999999998532100 0
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
.......+..|+|||.+.+..++.++|||||||
T Consensus 174 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~ 206 (297)
T cd05089 174 -----------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGV 206 (297)
T ss_pred -----------------------------------------------ccCCCCcCccccCchhhccCCCCchhhHHHHHH
Confidence 000012245699999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
++|||++ ||....... ....+.....++.....++.+.+|+.+||..+|.+||+++++++.
T Consensus 207 il~el~t~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 207 LLWEIVSLGGTPYCGMTCAE-LYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred HHHHHHcCCCCCCCCCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999985 775544333 333333333334444567789999999999999999999999753
No 357
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.94 E-value=1.9e-27 Score=262.01 Aligned_cols=211 Identities=17% Similarity=0.121 Sum_probs=152.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|+|++..++ ++.+ +...|++|||+.+++|.+++.+. ...+++..++.++.||+.||+|||++||+|||||
T Consensus 52 ~~~~l~h~niv~~~~-~~~~--~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlk 128 (328)
T cd08226 52 LSHFFRHPNIMTSWT-VFTT--GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIK 128 (328)
T ss_pred HHHhCCCCCcceEee-eEec--CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 344567888888777 5543 44679999999999999998543 2358999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.++++||+.+.......... ..
T Consensus 129 p~Nill~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~------------- 160 (328)
T cd08226 129 ASHILISGDGLVSLSGLSHLYSLVRNGQKA-----------------------------------KV------------- 160 (328)
T ss_pred HHHEEEeCCCcEEEechHHHhhhhccCccc-----------------------------------cc-------------
Confidence 999999999999999998653321100000 00
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC--CCCccCcchhHHHHHHHhhc
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvil~ell~ 267 (879)
... ......++..|+|||++.+. .++.++|||||||++|||++
T Consensus 161 --------------------------------~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~ 205 (328)
T cd08226 161 --------------------------------VYD---FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELAT 205 (328)
T ss_pred --------------------------------ccc---ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHh
Confidence 000 00011345679999999764 47899999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCC---------------------------------------------CchhhccChhhH
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVL---------------------------------------------PPQLLLKFPKEA 299 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~ 299 (879)
||............+..... .+......+.+.
T Consensus 206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (328)
T cd08226 206 GRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQ 285 (328)
T ss_pred CCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHH
Confidence 66544333332222211100 111223446688
Q ss_pred HHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 300 SFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
+|+.+||..||++|||+.|+++||||..
T Consensus 286 ~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 286 NLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred HHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 9999999999999999999999999964
No 358
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-27 Score=280.87 Aligned_cols=203 Identities=15% Similarity=0.189 Sum_probs=167.0
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC------CCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~------~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.+.+.+++-+|+|+|...+ +|-+ ...++|++|||+||+|..+|++. ...+...+.+.++.||+.|+.||++
T Consensus 744 ~Ea~~m~~f~HpNiv~liG-v~l~--~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~ 820 (1025)
T KOG1095|consen 744 KEALLMSKFDHPNIVSLIG-VCLD--SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES 820 (1025)
T ss_pred HHHHHHhcCCCcceeeEEE-eecC--CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh
Confidence 4555678899999998777 9987 55789999999999999999776 5678999999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+++|||||-..|+||+....|||+|||+|+++-..+.- ++
T Consensus 821 ~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yy----r~------------------------------------ 860 (1025)
T KOG1095|consen 821 KHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYY----RK------------------------------------ 860 (1025)
T ss_pred CCCcCcchhhhheeecccCcEEEcccchhHhhhhchhe----ec------------------------------------
Confidence 99999999999999999999999999999964211100 00
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
....+-...|||||.+..+.++.++|||||||
T Consensus 861 ------------------------------------------------~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGV 892 (1025)
T KOG1095|consen 861 ------------------------------------------------HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGV 892 (1025)
T ss_pred ------------------------------------------------cCccccceecCCHHHHhhcccccccchhhhHH
Confidence 00012234699999999999999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||+++ ||....+.......+..+ .-+.+..++..+.+++..||+.+|++||++..+++
T Consensus 893 llWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 893 LLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 9999999 886555544444455556 44555678888999999999999999999999987
No 359
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.94 E-value=3.7e-27 Score=253.92 Aligned_cols=202 Identities=17% Similarity=0.166 Sum_probs=152.8
Q ss_pred cccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhc-CcccccC
Q 002801 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNV 108 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~-givHrDl 108 (879)
...+|++++..++ .+.+ ....|++|||++ ++|.+++.. ....+++..++.++.||+.||+|||++ +|+||||
T Consensus 55 ~~~~~~~iv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dl 130 (283)
T cd06617 55 RSVDCPYTVTFYG-ALFR--EGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDV 130 (283)
T ss_pred HHcCCCCeeeeeE-EEec--CCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCC
Confidence 3457788877776 4432 346899999996 678777632 335689999999999999999999997 9999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.+||+|||++.......
T Consensus 131 kp~nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------- 158 (283)
T cd06617 131 KPSNVLINRNGQVKLCDFGISGYLVDSV---------------------------------------------------- 158 (283)
T ss_pred CHHHEEECCCCCEEEeeccccccccccc----------------------------------------------------
Confidence 9999999999999999999986531100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC----CCCCccCcchhHHHHHHH
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLLFE 264 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~~sDIwSlGvil~e 264 (879)
..+...|+..|+|||.+.+ ..++.++|||||||++||
T Consensus 159 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~ 199 (283)
T cd06617 159 ---------------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIE 199 (283)
T ss_pred ---------------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHH
Confidence 0012357888999998865 447899999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhcccCCCchh-hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
|++ ||..................+..+ ...+..+.++|.+||..+|.+||++.++++||||....
T Consensus 200 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 200 LATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred HHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 999 775433322222222222222221 23467789999999999999999999999999998654
No 360
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.94 E-value=3.7e-27 Score=252.36 Aligned_cols=202 Identities=15% Similarity=0.119 Sum_probs=153.2
Q ss_pred eecccccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcC-----CCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~-----~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ .+.+.. ...++++|||+.+++|..++.. ....+++..++.++.||+.||+|||++
T Consensus 54 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~ 132 (273)
T cd05035 54 CMKDFDHPNVMKLIG-VCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR 132 (273)
T ss_pred HHHhCCCCCeeeEEe-eeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 445567888877665 443222 2347999999999999998832 223689999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+||+++.++.+|++|||+++.........
T Consensus 133 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------------ 170 (273)
T cd05035 133 NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYR------------------------------------------ 170 (273)
T ss_pred CeeccccchheEEECCCCeEEECCccceeecccccccc------------------------------------------
Confidence 99999999999999999999999999987532110000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
......++..|+|||.+.+..++.++|||||||+
T Consensus 171 ----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~i 204 (273)
T cd05035 171 ----------------------------------------------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT 204 (273)
T ss_pred ----------------------------------------------ccccccCCccccCHhhcccCCCCcccchHHHHHH
Confidence 0001133567999999988889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+|||++ ||.... .......+.....++.+...++.+.+++.+||..||.+||++.+++++
T Consensus 205 l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 205 MWEIATRGQTPYPGVE-NHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999986 554433 333444444444444455677889999999999999999999999863
No 361
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.94 E-value=3.7e-27 Score=250.75 Aligned_cols=198 Identities=14% Similarity=0.111 Sum_probs=152.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+. .....|++|||+.+++|.+++++ ....+++..++.++.||+.||+|||+.||+|||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~ 130 (261)
T cd05072 54 LMKTLQHDKLVRLYA-VVT--KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLR 130 (261)
T ss_pred HHHhCCCCCeeeEEE-EEc--CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 344567888877666 333 23457999999999999999954 33568899999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++.........
T Consensus 131 p~nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------- 159 (261)
T cd05072 131 AANVLVSESLMCKIADFGLARVIEDNEYT--------------------------------------------------- 159 (261)
T ss_pred hhhEEecCCCcEEECCCccceecCCCcee---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 160 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g 201 (261)
T cd05072 160 --------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYG 201 (261)
T ss_pred --------------------------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccC
Confidence 0011234677999999988889999999999999999996
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||... ........+......+.....+..+.+++.+||..+|++||+++++++
T Consensus 202 ~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 202 KIPYPGM-SNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred CCCCCCC-CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 66433 233334444444344444456678899999999999999999999864
No 362
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.94 E-value=2e-27 Score=257.35 Aligned_cols=204 Identities=15% Similarity=0.164 Sum_probs=157.1
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ .+.+ ....|+|+||+++++|.+++.+. .+++.+++.++.||+.||.|||++||+|+||||+
T Consensus 70 l~~l~hp~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~ 144 (293)
T cd06647 70 MRENKHPNIVNYLD-SYLV--GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 144 (293)
T ss_pred HhhcCCCCeeehhh-eeee--CCcEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHH
Confidence 44556777777666 4433 34689999999999999999653 5789999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++++|||++........
T Consensus 145 Nili~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------------ 170 (293)
T cd06647 145 NILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------------ 170 (293)
T ss_pred HEEEcCCCCEEEccCcceeccccccc------------------------------------------------------
Confidence 99999999999999998865321100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
......|++.|+|||.+.+..++.++|||||||++|||++ |
T Consensus 171 ------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~p 214 (293)
T cd06647 171 ------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214 (293)
T ss_pred ------------------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 0012367889999999988889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccC-CCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 269 FSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
|................. ..+.....++.+.+++.+||..+|.+||++.+++.||||.....
T Consensus 215 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~ 277 (293)
T cd06647 215 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKP 277 (293)
T ss_pred CCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence 755433222211111111 11122234567889999999999999999999999999986553
No 363
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.94 E-value=5.5e-27 Score=250.21 Aligned_cols=200 Identities=12% Similarity=0.108 Sum_probs=155.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+. .....|++|||+.+++|.+++......+++.+++.++.|++.||+|||++||+|+||||
T Consensus 58 ~l~~l~h~~i~~~~~-~~~--~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p 134 (266)
T cd05033 58 IMGQFDHPNIIRLEG-VVT--KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAA 134 (266)
T ss_pred HHHhCCCCCcceEeE-EEe--cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCc
Confidence 445567888877666 333 24468999999999999999976656789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||+++........ .
T Consensus 135 ~nili~~~~~~~l~dfg~~~~~~~~~~~--~------------------------------------------------- 163 (266)
T cd05033 135 RNILVNSNLVCKVSDFGLSRRLEDSEAT--Y------------------------------------------------- 163 (266)
T ss_pred ceEEEcCCCCEEECccchhhcccccccc--e-------------------------------------------------
Confidence 9999999999999999999764211000 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 -------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~ 206 (266)
T cd05033 164 -------------------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGE 206 (266)
T ss_pred -------------------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCC
Confidence 0001133567999999988889999999999999999986
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||..... ......+......+.....++.+.+++.+||..+|++||++.+++++
T Consensus 207 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 207 RPYWDMSN-QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred CCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 6644332 23333344333334445667889999999999999999999999864
No 364
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94 E-value=2.8e-27 Score=256.10 Aligned_cols=201 Identities=18% Similarity=0.216 Sum_probs=148.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ ++.+ ....|++|||+. ++|.+++......+++.+++.++.||+.||.|||+.||+|+||||
T Consensus 56 ~l~~l~h~ni~~~~~-~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp 131 (291)
T cd07870 56 LLKGLKHANIVLLHD-IIHT--KETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKP 131 (291)
T ss_pred HHHhcCCCCEeEEEE-EEec--CCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence 344567888876665 4433 346899999995 677777755445678999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++.......
T Consensus 132 ~Nil~~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------------- 158 (291)
T cd07870 132 QNLLISYLGELKLADFGLARAKSIPSQ----------------------------------------------------- 158 (291)
T ss_pred HHEEEcCCCcEEEeccccccccCCCCC-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~-- 267 (879)
......+++.|+|||.+.+. .++.++|||||||+||||++
T Consensus 159 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~ 201 (291)
T cd07870 159 -------------------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQ 201 (291)
T ss_pred -------------------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 00113568899999998764 47899999999999999999
Q ss_pred -CCCCChhhHhHHhhhcc---------------------c----CCCchh------hccChhhHHHHHHhcCCCCCCCCC
Q 002801 268 -PFSTGEEKTRTMSSLRH---------------------R----VLPPQL------LLKFPKEASFCLWLLHPEPSGRPK 315 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~---------------------~----~~~~~~------~~~~~~~~~li~~~L~~dP~~Rpt 315 (879)
||............... . ..+... ....+.+.+++.+||..||.+|||
T Consensus 202 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t 281 (291)
T cd07870 202 PAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS 281 (291)
T ss_pred CCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC
Confidence 77544332221111100 0 000000 112456789999999999999999
Q ss_pred HHHHhhcccc
Q 002801 316 MGELLQSEFL 325 (879)
Q Consensus 316 ~~evl~hp~~ 325 (879)
+.|++.||||
T Consensus 282 ~~~~l~h~~~ 291 (291)
T cd07870 282 AQDALLHPYF 291 (291)
T ss_pred HHHHhcCCCC
Confidence 9999999997
No 365
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.94 E-value=3e-27 Score=251.32 Aligned_cols=197 Identities=12% Similarity=0.086 Sum_probs=151.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..+. .+. ....|++|||+.+++|.+++... ...+++..++.++.||+.||.|||+.||+|||||
T Consensus 54 ~l~~l~~~~i~~~~~-~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~ 129 (260)
T cd05070 54 IMKKLRHDKLVQLYA-VVS---EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLR 129 (260)
T ss_pred HHHhcCCCceEEEEe-EEC---CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCc
Confidence 344567777777665 332 23579999999999999999543 3468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++.........
T Consensus 130 p~Nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------- 158 (260)
T cd05070 130 SANILVGDGLVCKIADFGLARLIEDNEYT--------------------------------------------------- 158 (260)
T ss_pred cceEEEeCCceEEeCCceeeeeccCcccc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g 200 (260)
T cd05070 159 --------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred --------------------------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcC
Confidence 0011234667999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+.....++.....+..+.+|+.+||.++|.+|||+.++.+
T Consensus 201 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 201 RVPYPGMN-NREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred CCCCCCCC-HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 564433 33333444444344444556778999999999999999999998863
No 366
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.94 E-value=3.6e-27 Score=250.84 Aligned_cols=198 Identities=14% Similarity=0.106 Sum_probs=151.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..+. .+.. ....|++|||+.|++|.+++... ...+++..+..++.||+.||.|||++||+|||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 130 (261)
T cd05068 54 IMKKLRHPKLIQLYA-VCTL--EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLA 130 (261)
T ss_pred HHHHCCCCCccceeE-EEec--CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 344556888877666 4433 44689999999999999999553 2468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++........
T Consensus 131 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------- 159 (261)
T cd05068 131 ARNVLVGENNICKVADFGLARVIKEDIYE--------------------------------------------------- 159 (261)
T ss_pred cceEEEcCCCCEEECCcceEEEccCCccc---------------------------------------------------
Confidence 99999999999999999998764211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.......+..|+|||.+.+..++.++|||||||++|||++
T Consensus 160 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g 201 (261)
T cd05068 160 --------------------------------------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred --------------------------------------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcC
Confidence 0000122456999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+......+.....+..+.+++.+||..+|.+||++.++++
T Consensus 202 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 202 RMPYPGMTN-AEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred CCCCCCCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 6644332 2333333333333344456788999999999999999999999875
No 367
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.94 E-value=2.3e-27 Score=262.34 Aligned_cols=212 Identities=18% Similarity=0.181 Sum_probs=156.8
Q ss_pred eeccc-ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+... +|++++..++ ++..+....+|+||||+. ++|.++++.. .+++..++.++.||+.||.|||+.||+|||||
T Consensus 59 ~l~~l~~h~ni~~~~~-~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~ 134 (337)
T cd07852 59 FLQELGDHPNIVKLLN-VIKAENDKDIYLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLK 134 (337)
T ss_pred HHHHhcCCCCccceee-eeccCCCceEEEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 44455 8888888776 554444556899999996 5999998654 68999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++.........+
T Consensus 135 p~nill~~~~~~kl~d~g~~~~~~~~~~~~~------------------------------------------------- 165 (337)
T cd07852 135 PSNILLNSDCRVKLADFGLARSLSELEENPE------------------------------------------------- 165 (337)
T ss_pred HHHEEEcCCCcEEEeeccchhcccccccccc-------------------------------------------------
Confidence 9999999999999999999876421100000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~- 267 (879)
........||.+|+|||.+.+ ..++.++|||||||++|||++
T Consensus 166 ------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg 209 (337)
T cd07852 166 ------------------------------------NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLG 209 (337)
T ss_pred ------------------------------------CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhC
Confidence 000123478999999998865 448899999999999999999
Q ss_pred --CCCCChhhHhHHhh--------------------------hccc---CCCchhhccChhhHHHHHHhcCCCCCCCCCH
Q 002801 268 --PFSTGEEKTRTMSS--------------------------LRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 268 --pf~~~~~~~~~~~~--------------------------~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
||............ +... .........+..+.++|.+||+.+|++|||+
T Consensus 210 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~ 289 (337)
T cd07852 210 KPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTA 289 (337)
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCH
Confidence 66433221111000 0000 0011122346778899999999999999999
Q ss_pred HHHhhcccccCCcCc
Q 002801 317 GELLQSEFLNEPRDS 331 (879)
Q Consensus 317 ~evl~hp~~~~~~~~ 331 (879)
.++++||||+....+
T Consensus 290 ~~il~~~~~~~~~~~ 304 (337)
T cd07852 290 EEALEHPYVAQFHNP 304 (337)
T ss_pred HHHhhChhhhhhccC
Confidence 999999999875444
No 368
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.94 E-value=4.2e-27 Score=250.58 Aligned_cols=197 Identities=13% Similarity=0.079 Sum_probs=151.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+. ....|++|||+.+++|.+++.+. ...+++..++.++.|++.||+|||+.||+|||||
T Consensus 54 ~l~~l~~~~i~~~~~-~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~ 129 (262)
T cd05071 54 VMKKLRHEKLVQLYA-VVS---EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 129 (262)
T ss_pred HHHhCCCCCcceEEE-EEC---CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccC
Confidence 344556888877665 332 23579999999999999999643 3457899999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+||+|||.++........
T Consensus 130 p~Nill~~~~~~~L~dfg~~~~~~~~~~~--------------------------------------------------- 158 (262)
T cd05071 130 AANILVGENLVCKVADFGLARLIEDNEYT--------------------------------------------------- 158 (262)
T ss_pred cccEEEcCCCcEEeccCCceeeccccccc---------------------------------------------------
Confidence 99999999999999999998654211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||++.+..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g 200 (262)
T cd05071 159 --------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 200 (262)
T ss_pred --------------------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCC
Confidence 0001245678999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... .....+......+.....+..+.+++.+||+++|++||++.++++
T Consensus 201 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 201 RVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred CCCCCCCChH-HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 66544332 233333333233334456678899999999999999999999875
No 369
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.94 E-value=2e-27 Score=256.44 Aligned_cols=204 Identities=17% Similarity=0.201 Sum_probs=158.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. .+.. ....|+++||++|++|.+++......+++.++..++.||+.||.|||+.||+|+||||
T Consensus 68 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p 144 (286)
T cd06614 68 IMKDCKHPNIVDYYD-SYLV--GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKS 144 (286)
T ss_pred HHHHCCCCCeeEEEE-EEEE--CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCh
Confidence 445567888877666 4433 3568999999999999999966544799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 145 ~ni~i~~~~~~~l~d~~~~~~~~~~~~----------------------------------------------------- 171 (286)
T cd06614 145 DNILLSKDGSVKLADFGFAAQLTKEKS----------------------------------------------------- 171 (286)
T ss_pred hhEEEcCCCCEEECccchhhhhccchh-----------------------------------------------------
Confidence 999999999999999998754311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 172 -------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~ 214 (286)
T cd06614 172 -------------------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEP 214 (286)
T ss_pred -------------------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCC
Confidence 0012357888999999988889999999999999999998
Q ss_pred CCCCChhhHhHHhhhcccCCCc--hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||......... ..+.....++ .....+..+.++|.+||..+|.+||++.++++|+||...
T Consensus 215 p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 215 PYLREPPLRAL-FLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred CCCCCCHHHHH-HHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 66544332222 2222222221 122256778999999999999999999999999999873
No 370
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=2.2e-27 Score=255.98 Aligned_cols=201 Identities=17% Similarity=0.127 Sum_probs=155.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlK 109 (879)
.+...+|++++..++ .+.+. ..+|++|||+++++|.+++.+. +.+++..++.++.|++.||.|||+ .||+|||||
T Consensus 56 ~l~~l~h~~i~~~~~-~~~~~--~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~ 131 (284)
T cd06620 56 IMHECRSPYIVSFYG-AFLNE--NNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIK 131 (284)
T ss_pred HHHHcCCCCcceEee-eEecC--CEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCC
Confidence 345567888887776 44333 5689999999999999998654 468999999999999999999997 699999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++......
T Consensus 132 p~nil~~~~~~~~l~d~gl~~~~~~~------------------------------------------------------ 157 (284)
T cd06620 132 PSNILVNSRGQIKLCDFGVSGELINS------------------------------------------------------ 157 (284)
T ss_pred HHHEEECCCCcEEEccCCcccchhhh------------------------------------------------------
Confidence 99999999999999999998542100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 158 --------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~ 199 (284)
T cd06620 158 --------------------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199 (284)
T ss_pred --------------------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCC
Confidence 0011367889999999988889999999999999999998
Q ss_pred -CCCCChhh----------HhHHhhhcccCCCchh-hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 -PFSTGEEK----------TRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 -pf~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
||...... ......+.....+... ...+..+.+|+.+||.+||.+|||+.|+++|+||..
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 200 FPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred CCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 77543321 0111111111112111 125567889999999999999999999999999865
No 371
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.94 E-value=4e-27 Score=256.37 Aligned_cols=192 Identities=14% Similarity=0.126 Sum_probs=147.3
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------CCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
+|++++..++ .+.+ ...+|++|||+++++|.+++.+.. ..+++..++.++.||+.||+|||+
T Consensus 66 ~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~ 142 (303)
T cd05088 66 HHPNIINLLG-ACEH--RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 142 (303)
T ss_pred CCCCcceEEE-EECC--CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 6778777666 4443 346899999999999999995321 257899999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+|||++.++.+|++|||+++..... .
T Consensus 143 ~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~------------------------------------------ 178 (303)
T cd05088 143 KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--V------------------------------------------ 178 (303)
T ss_pred CCccccccchheEEecCCCcEEeCccccCcccchh--h------------------------------------------
Confidence 99999999999999999999999999998532100 0
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||.+.+..++.++|||||||
T Consensus 179 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 211 (303)
T cd05088 179 -----------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 211 (303)
T ss_pred -----------------------------------------------hcccCCCcccccCHHHHhccCCcccccchhhhh
Confidence 000112356799999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+||||++ ||...... .....+.....++.....++.+.+|+.+||..+|++||++.+++++
T Consensus 212 il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 212 LLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred HHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999985 66443322 2222233332233334456788999999999999999999999875
No 372
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.94 E-value=5e-27 Score=255.41 Aligned_cols=195 Identities=14% Similarity=0.141 Sum_probs=150.7
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
+|++++..++ .+.+ ...+|++|||+.+++|.+++.... ..+++.+++.|+.||+.||.|||++||+|+||||+|||
T Consensus 97 ~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil 173 (302)
T cd05055 97 NHENIVNLLG-ACTI--GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVL 173 (302)
T ss_pred CCCCcceEEE-EEec--CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEE
Confidence 6888887766 4433 346899999999999999995432 34899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.++++|||+++........
T Consensus 174 ~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------------------- 197 (302)
T cd05055 174 LTHGKIVKICDFGLARDIMNDSNY-------------------------------------------------------- 197 (302)
T ss_pred EcCCCeEEECCCcccccccCCCce--------------------------------------------------------
Confidence 999999999999998653211000
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFS 270 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~ 270 (879)
.......++..|+|||.+.+..++.++|||||||++|||++ ||.
T Consensus 198 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~ 245 (302)
T cd05055 198 --------------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYP 245 (302)
T ss_pred --------------------------------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcC
Confidence 00011245678999999998889999999999999999986 665
Q ss_pred CChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
...........+.....++.....++.+.+++.+||.++|++||++.++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 246 GMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 544433333333333333333345678899999999999999999999986
No 373
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=5.7e-27 Score=255.33 Aligned_cols=195 Identities=16% Similarity=0.145 Sum_probs=150.1
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------CCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ .+.+ ....|++|||+.+++|.++|.+. ...+++.+++.++.||+.||.|||+
T Consensus 79 ~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~ 155 (304)
T cd05101 79 KHKNIINLLG-ACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS 155 (304)
T ss_pred cCCCchheeE-EEec--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 6777777666 4433 34679999999999999999542 1247888999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+||+++.++.+|++|||+++.........
T Consensus 156 ~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~----------------------------------------- 194 (304)
T cd05101 156 QKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYK----------------------------------------- 194 (304)
T ss_pred CCeeecccccceEEEcCCCcEEECCCccceecccccccc-----------------------------------------
Confidence 999999999999999999999999999987642210000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||++.+..++.++|||||||
T Consensus 195 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 227 (304)
T cd05101 195 -----------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 227 (304)
T ss_pred -----------------------------------------------cccCCCCCceeeCchhhccCCCCchhhHHHHHH
Confidence 001124467799999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+||||++ ||.. .........+............+..+.+|+.+||..+|.+||++.++++.
T Consensus 228 ~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 228 LMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHcCCCCCccc-CCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 9999987 5533 23333333444433333344567789999999999999999999999873
No 374
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.94 E-value=3.1e-27 Score=254.73 Aligned_cols=203 Identities=20% Similarity=0.134 Sum_probs=150.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ ++........|++|||+++++|.+++.+....+++..++.++.||+.||+|||++||+||||||
T Consensus 58 ~l~~l~h~~iv~~~~-~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp 136 (284)
T cd05081 58 ILKSLQHDNIVKYKG-VCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLAT 136 (284)
T ss_pred HHHhCCCCCeeEEEE-EEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCH
Confidence 355567888777655 5544445568999999999999999966555789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||+++..........
T Consensus 137 ~nili~~~~~~~l~dfg~~~~~~~~~~~~~-------------------------------------------------- 166 (284)
T cd05081 137 RNILVESENRVKIGDFGLTKVLPQDKEYYK-------------------------------------------------- 166 (284)
T ss_pred hhEEECCCCeEEECCCcccccccCCCccee--------------------------------------------------
Confidence 999999999999999999876421100000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 167 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~ 209 (284)
T cd05081 167 -------------------------------------VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD 209 (284)
T ss_pred -------------------------------------ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCC
Confidence 0000123456999999988889999999999999999998
Q ss_pred CCCCChhh---------------HhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEK---------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|+...... ......+.....++.....+..+.+|+.+||..+|++|||+.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 210 KSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred cCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 22111100 0001111222223333455678899999999999999999999976
No 375
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.94 E-value=3.7e-27 Score=253.06 Aligned_cols=199 Identities=13% Similarity=0.066 Sum_probs=152.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------CCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ ++.+ ....|++|||+.+++|.+++... ...+++..++.++.||+.||.|||+.
T Consensus 62 ~l~~~~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 138 (277)
T cd05032 62 VMKEFNCHHVVRLLG-VVST--GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK 138 (277)
T ss_pred HHHhCCCCceeEEEE-EEcC--CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 345567888877666 4433 35689999999999999998432 12468889999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+||+++.++.+|++|||+++........
T Consensus 139 ~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------- 175 (277)
T cd05032 139 KFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY------------------------------------------- 175 (277)
T ss_pred CccccccChheEEEcCCCCEEECCcccchhhccCccc-------------------------------------------
Confidence 9999999999999999999999999998653211000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......++..|+|||.+.+..++.++|||||||+
T Consensus 176 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 210 (277)
T cd05032 176 ---------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVV 210 (277)
T ss_pred ---------------------------------------------ccCCCCCccccccCHHHHhcCCCCcccchHHHHHH
Confidence 00011256778999999988889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||++ ||... ........+.....++.+...+..+.+++.+||..+|++|||+.++++
T Consensus 211 l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 211 LWEMATLAEQPYQGL-SNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHhhccCCCCCccC-CHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 999996 66433 333334444443334444455778899999999999999999999976
No 376
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.94 E-value=4e-27 Score=249.45 Aligned_cols=193 Identities=17% Similarity=0.115 Sum_probs=150.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+.+ ...|++|||+.+++|.+++... ...+++..++.++.|++.||.|||+.|++|||||
T Consensus 52 ~l~~~~~~~i~~~~~-~~~~---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~ 127 (254)
T cd05083 52 VMTKLHHKNLVRLLG-VILH---NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLA 127 (254)
T ss_pred HHHhCCCCCcCeEEE-EEcC---CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccC
Confidence 455677888888776 4432 3479999999999999999543 3468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++..... .
T Consensus 128 p~nili~~~~~~kl~Dfg~~~~~~~~-~---------------------------------------------------- 154 (254)
T cd05083 128 ARNILVSEDGVAKVSDFGLARVGSMG-V---------------------------------------------------- 154 (254)
T ss_pred cceEEEcCCCcEEECCCccceecccc-C----------------------------------------------------
Confidence 99999999999999999998542100 0
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+..|+|||.+.+..++.++|||||||++|||++
T Consensus 155 ----------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g 194 (254)
T cd05083 155 ----------------------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYG 194 (254)
T ss_pred ----------------------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCC
Confidence 00122456999999988889999999999999999985
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||....... ....+.....++.....++.+.+++.+||..+|.+||++.++++
T Consensus 195 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 195 RAPYPKMSLKE-VKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred CCCCccCCHHH-HHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 665443332 22233333333333456678899999999999999999999875
No 377
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=4.2e-27 Score=256.77 Aligned_cols=194 Identities=16% Similarity=0.141 Sum_probs=149.7
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------CCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ +|.+ ....|++|||+.+++|.+++.... ..+++.+++.++.||+.||+|||+
T Consensus 82 ~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 158 (307)
T cd05098 82 KHKNIINLLG-ACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS 158 (307)
T ss_pred CCCCEeeEEE-EEec--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5777777666 5543 346899999999999999995421 247889999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+||+++.++.+|++|||.++.........
T Consensus 159 ~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~----------------------------------------- 197 (307)
T cd05098 159 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK----------------------------------------- 197 (307)
T ss_pred CCcccccccHHheEEcCCCcEEECCCcccccccccchhh-----------------------------------------
Confidence 999999999999999999999999999986532110000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||.+.+..++.++|||||||
T Consensus 198 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~ 230 (307)
T cd05098 198 -----------------------------------------------KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 230 (307)
T ss_pred -----------------------------------------------ccccCCCccceeChHHhccCCCCcHHHHHHHHH
Confidence 001113356799999999888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++|||++ ||.. .........+.....++.+...+..+.+|+.+||..+|.+||++.++++
T Consensus 231 ~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 231 LLWEIFTLGGSPYPG-VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHHHcCCCCCCCc-CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 9999986 5543 3333344444444444444456778899999999999999999999986
No 378
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.94 E-value=2.2e-27 Score=262.91 Aligned_cols=205 Identities=16% Similarity=0.231 Sum_probs=154.7
Q ss_pred eeecccccccCCCCCCcccccccc----cCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAA----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
..+...+|++++..++ ++..+.. ...|++|||+ |++|.+++.. ..+++..++.++.||+.||+|||++||+|
T Consensus 66 ~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi~H 141 (343)
T cd07880 66 RLLKHMKHENVIGLLD-VFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIH 141 (343)
T ss_pred HHHHhcCCCCccceee-eecCCccccccceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3455667888877666 4433221 2458999998 7899998854 46899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+||+++.++.++++|||++......
T Consensus 142 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-------------------------------------------------- 171 (343)
T cd07880 142 RDLKPGNLAVNEDCELKILDFGLARQTDSE-------------------------------------------------- 171 (343)
T ss_pred CCCCHHHEEEcCCCCEEEeecccccccccC--------------------------------------------------
Confidence 999999999999999999999998653111
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~e 264 (879)
.....++++|+|||.+.+ ..++.++|||||||++|+
T Consensus 172 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~ 208 (343)
T cd07880 172 -------------------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAE 208 (343)
T ss_pred -------------------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 011356889999999876 358999999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhccc-------------------------CC----CchhhccChhhHHHHHHhcCCCCCC
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHR-------------------------VL----PPQLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~-------------------------~~----~~~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
|++ ||............+... .. .......++.+.++|.+||+.||.+
T Consensus 209 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 288 (343)
T cd07880 209 MLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAES 288 (343)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhh
Confidence 999 775443322222111100 00 0111244567889999999999999
Q ss_pred CCCHHHHhhcccccCCcCc
Q 002801 313 RPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~~~~ 331 (879)
|||+.+++.||||+.....
T Consensus 289 R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 289 RITAAEALAHPYFEEFHDP 307 (343)
T ss_pred CCCHHHHhcCccHhhhcCc
Confidence 9999999999999876544
No 379
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.94 E-value=2.4e-27 Score=252.89 Aligned_cols=205 Identities=15% Similarity=0.195 Sum_probs=155.7
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC--CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
+....|++++..++ .+. .....|++||++.|++|.+++... ...+++..++.++.||+.||.|||++||+|+|||
T Consensus 53 l~~l~~~~i~~~~~-~~~--~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~ 129 (267)
T cd06610 53 MSQCNHPNVVKYYT-SFV--VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIK 129 (267)
T ss_pred HHhcCCCCEEEEEE-EEe--eCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 34456777766655 333 345689999999999999999543 2468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++..........
T Consensus 130 p~ni~~~~~~~~~l~df~~~~~~~~~~~~~-------------------------------------------------- 159 (267)
T cd06610 130 AGNILLGEDGSVKIADFGVSASLADGGDRT-------------------------------------------------- 159 (267)
T ss_pred HHhEEEcCCCCEEEcccchHHHhccCcccc--------------------------------------------------
Confidence 999999999999999999986642210000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~- 267 (879)
........|+..|+|||.+... .++.++|+|||||++|||++
T Consensus 160 ------------------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g 203 (267)
T cd06610 160 ------------------------------------RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATG 203 (267)
T ss_pred ------------------------------------ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhC
Confidence 0000224688999999998876 68999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccC--CCch--hhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHRV--LPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||............+.... .+.. ....++.+.+++.+||..||++||++.++++||||
T Consensus 204 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 204 AAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred CCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 7754443333333332211 1111 12445778899999999999999999999999997
No 380
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.94 E-value=3.8e-27 Score=249.84 Aligned_cols=201 Identities=17% Similarity=0.198 Sum_probs=157.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+.+ ...+|+++||+.+++|.+++.+. ...+++..++.++.||+.||.|||+.||+|+|||
T Consensus 52 ~l~~~~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~ 128 (257)
T cd08225 52 LLAKMKHPNIVTFFA-SFQE--NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIK 128 (257)
T ss_pred HHHhCCCCChhhhhh-eecc--CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Confidence 455667888888776 4443 34689999999999999999543 2357999999999999999999999999999999
Q ss_pred CcceeeccCC-CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 110 PSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 110 P~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
|+||+++.++ .+|++|||.+........
T Consensus 129 ~~nil~~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------------- 157 (257)
T cd08225 129 SQNIFLSKNGMVAKLGDFGIARQLNDSME--------------------------------------------------- 157 (257)
T ss_pred HHHEEEcCCCCeEEecccccchhccCCcc---------------------------------------------------
Confidence 9999998875 469999998865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
......|++.|+|||.+.+..++.++|+|||||++|||++
T Consensus 158 ---------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08225 158 ---------------------------------------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTL 198 (257)
T ss_pred ---------------------------------------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence 0011357888999999988889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||........... ......++.....+..+.+++.+||..+|++|||+.++++||||
T Consensus 199 ~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 199 KHPFEGNNLHQLVLK-ICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred CCCCCCccHHHHHHH-HhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 7754443333333 33333444444556789999999999999999999999999997
No 381
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.94 E-value=7.3e-27 Score=246.74 Aligned_cols=198 Identities=15% Similarity=0.136 Sum_probs=153.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .|.++ ...|++|||+++++|.+++......+++..++.++.||+.||.|||++|++|+||||
T Consensus 45 ~l~~l~h~~i~~~~~-~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p 121 (250)
T cd05085 45 ILKQYDHPNIVKLIG-VCTQR--QPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAA 121 (250)
T ss_pred HHHhCCCCCcCeEEE-EEecC--CccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCh
Confidence 344567888877766 55443 468999999999999999966556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++.........
T Consensus 122 ~nili~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------------- 149 (250)
T cd05085 122 RNCLVGENNVLKISDFGMSRQEDDGIYS---------------------------------------------------- 149 (250)
T ss_pred heEEEcCCCeEEECCCccceeccccccc----------------------------------------------------
Confidence 9999999999999999998542111000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||++.+..++.++|||||||++|||++
T Consensus 150 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~ 192 (250)
T cd05085 150 -------------------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGV 192 (250)
T ss_pred -------------------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCC
Confidence 0001123556999999988889999999999999999997
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... .....+............+..+.+++.+||..+|++||++.++++
T Consensus 193 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 193 CPYPGMTNQ-QAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred CCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 77544332 333333333333334456688999999999999999999999976
No 382
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.94 E-value=3.7e-27 Score=248.71 Aligned_cols=198 Identities=17% Similarity=0.225 Sum_probs=153.6
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+.+ ....|+++||++|++|.+++......+++.++..++.|++.||.|||++|++|+||+|+
T Consensus 51 l~~l~~~~i~~~~~-~~~~--~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ 127 (253)
T cd05122 51 LKKCKHPNIVKYYG-SYLK--KDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAA 127 (253)
T ss_pred HHhCCCCCEeEEEE-EEec--CCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHH
Confidence 34445777766555 3333 25689999999999999999665467899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++|+|||.+........
T Consensus 128 ni~i~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------------ 153 (253)
T cd05122 128 NILLTSDGEVKLIDFGLSAQLSDTKA------------------------------------------------------ 153 (253)
T ss_pred HEEEccCCeEEEeecccccccccccc------------------------------------------------------
Confidence 99999999999999999865421100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....|+..|+|||.+.+..++.++|||||||++|+|++ |
T Consensus 154 -------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p 196 (253)
T cd05122 154 -------------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPP 196 (253)
T ss_pred -------------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence 012367888999999988889999999999999999999 6
Q ss_pred CCCChhhHhHHhhhcccCCCchhhc--cChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
|.............. ...+..... .+..+.+++.+||..||++|||+.++++|||
T Consensus 197 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 197 YSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred CCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 654432222222221 212221112 2577899999999999999999999999998
No 383
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.94 E-value=6.8e-27 Score=259.07 Aligned_cols=197 Identities=18% Similarity=0.191 Sum_probs=148.0
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------------------------------
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------------------------------------- 76 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------------------------------------- 76 (879)
+|++++..++ .|.. .....|++||||++|+|.+++....
T Consensus 69 ~h~niv~~~~-~~~~-~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (343)
T cd05103 69 HHLNVVNLLG-ACTK-PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQS 146 (343)
T ss_pred CCccHhhhcc-eeec-CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccc
Confidence 5677777666 4443 2345799999999999999984321
Q ss_pred ---------------------------CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccc
Q 002801 77 ---------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 129 (879)
Q Consensus 77 ---------------------------~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~ 129 (879)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.+|++|||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~ 226 (343)
T cd05103 147 SASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLA 226 (343)
T ss_pred cccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccc
Confidence 23677888999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeecccccccccc
Q 002801 130 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 209 (879)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (879)
+........
T Consensus 227 ~~~~~~~~~----------------------------------------------------------------------- 235 (343)
T cd05103 227 RDIYKDPDY----------------------------------------------------------------------- 235 (343)
T ss_pred cccccCcch-----------------------------------------------------------------------
Confidence 653111000
Q ss_pred ccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhccc
Q 002801 210 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHR 285 (879)
Q Consensus 210 d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~ 285 (879)
.......++..|+|||.+.+..++.++|||||||++|||++ ||............+...
T Consensus 236 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 298 (343)
T cd05103 236 -----------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 298 (343)
T ss_pred -----------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhcc
Confidence 00011234667999999988889999999999999999985 665433333333333333
Q ss_pred CCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 286 VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 286 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
..++.+...++.+.+++.+||+.+|.+||++.++++|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 299 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 3333333455788999999999999999999999875
No 384
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=3.2e-25 Score=242.35 Aligned_cols=270 Identities=17% Similarity=0.311 Sum_probs=221.8
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEE
Q 002801 574 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVL 653 (879)
Q Consensus 574 l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~ 653 (879)
++|+. ...+|+|.. ..|++|+..++. ...+..+. ...|+++.|++. +.+|+.|..+|.|.|||..+.+.+
T Consensus 183 ldWss-~n~laValg-~~vylW~~~s~~------v~~l~~~~-~~~vtSv~ws~~-G~~LavG~~~g~v~iwD~~~~k~~ 252 (484)
T KOG0305|consen 183 LDWSS-ANVLAVALG-QSVYLWSASSGS------VTELCSFG-EELVTSVKWSPD-GSHLAVGTSDGTVQIWDVKEQKKT 252 (484)
T ss_pred hhccc-CCeEEEEec-ceEEEEecCCCc------eEEeEecC-CCceEEEEECCC-CCEEEEeecCCeEEEEehhhcccc
Confidence 44553 334555443 489999977632 11223333 688999999995 999999999999999999999999
Q ss_pred EEecc-CCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEE-Ee-cCCceEEEEeeCCCCCEEEEEeCCCeEEEE
Q 002801 654 TEMRE-HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGT-IK-TKANVCCVQFPLDSGRSLAFGSADHRIYYY 730 (879)
Q Consensus 654 ~~~~~-h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~-~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iw 730 (879)
..+.+ |..+|-+++|+ ...+.+|+.|+.|..+|++..+.... +. |...||.++|+++ ++++|+|+.|+.+.||
T Consensus 253 ~~~~~~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d-~~~lASGgnDN~~~Iw 328 (484)
T KOG0305|consen 253 RTLRGSHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPD-GNQLASGGNDNVVFIW 328 (484)
T ss_pred ccccCCcCceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCC-CCeeccCCCccceEec
Confidence 99988 99999999997 47899999999999999998876655 54 4567999999999 8999999999999999
Q ss_pred EcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEE--EcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCC
Q 002801 731 DLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSA--STDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG 806 (879)
Q Consensus 731 Dl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~--s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 806 (879)
|..... |...+..|..+|..++|+ ...+||+| +.|+.|++||+.++ ..+.... -.+.|..|.|++..+
T Consensus 329 d~~~~~-p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g------~~i~~vd-tgsQVcsL~Wsk~~k 400 (484)
T KOG0305|consen 329 DGLSPE-PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTG------ARIDSVD-TGSQVCSLIWSKKYK 400 (484)
T ss_pred cCCCcc-ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCC------cEecccc-cCCceeeEEEcCCCC
Confidence 996665 688899999999999998 88899986 47999999999987 4555543 356799999999986
Q ss_pred EEEEE--eCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 807 YVATG--SETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 807 ~lasg--s~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
-|+++ -.++.|.||...+.+++..+ .+|...|..++|+|||. .+++|+.|.++++|+++
T Consensus 401 Ei~sthG~s~n~i~lw~~ps~~~~~~l-------------~gH~~RVl~la~SPdg~-~i~t~a~DETlrfw~~f 461 (484)
T KOG0305|consen 401 ELLSTHGYSENQITLWKYPSMKLVAEL-------------LGHTSRVLYLALSPDGE-TIVTGAADETLRFWNLF 461 (484)
T ss_pred EEEEecCCCCCcEEEEeccccceeeee-------------cCCcceeEEEEECCCCC-EEEEecccCcEEecccc
Confidence 44443 34678999999875554433 57899999999999999 99999999999999874
No 385
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.94 E-value=5.3e-27 Score=258.89 Aligned_cols=209 Identities=15% Similarity=0.153 Sum_probs=151.2
Q ss_pred ccccCCCCCCcccc-c-ccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 36 DHLRNQGGLSGVCE-N-EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 36 ~~~~~~~~~~~~~~-~-~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
+|++++..+. .+. . ......|++|+|+. ++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+||
T Consensus 60 ~h~~iv~~~~-~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Ni 136 (332)
T cd07857 60 GHKNITCLYD-MDIVFPGNFNELYLYEELME-ADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNL 136 (332)
T ss_pred CCCChheeee-eeeeccccCCcEEEEEeccc-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHe
Confidence 5777777665 221 1 22245688888885 6899999554 5789999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
|++.++.+||+|||+++.........
T Consensus 137 li~~~~~~kl~Dfg~a~~~~~~~~~~------------------------------------------------------ 162 (332)
T cd07857 137 LVNADCELKICDFGLARGFSENPGEN------------------------------------------------------ 162 (332)
T ss_pred EEcCCCCEEeCcCCCceecccccccc------------------------------------------------------
Confidence 99999999999999997642110000
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc---CC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PF 269 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~---pf 269 (879)
........||..|+|||.+.+ ..++.++|||||||++|+|++ ||
T Consensus 163 --------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf 210 (332)
T cd07857 163 --------------------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVF 210 (332)
T ss_pred --------------------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCC
Confidence 000122478999999998866 458999999999999999998 55
Q ss_pred CCChhhHhHHhhh--------------------------cc---cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 270 STGEEKTRTMSSL--------------------------RH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 270 ~~~~~~~~~~~~~--------------------------~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
............+ .. ..++......++.+.+|+.+||+.||.+|||+.+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 211 KGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 4332111110000 00 000111123456788999999999999999999999
Q ss_pred hcccccCCcCchH
Q 002801 321 QSEFLNEPRDSME 333 (879)
Q Consensus 321 ~hp~~~~~~~~~~ 333 (879)
.||||.....+..
T Consensus 291 ~~~~~~~~~~~~~ 303 (332)
T cd07857 291 EHPYLAIWHDPDD 303 (332)
T ss_pred cChhhhhhcCccc
Confidence 9999986654433
No 386
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.94 E-value=7.1e-27 Score=249.95 Aligned_cols=197 Identities=18% Similarity=0.127 Sum_probs=154.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ +|.+ ...|++|||+.+++|.+++.+....+++..++.++.||+.||+|||+.|++|+||||
T Consensus 60 ~l~~~~h~~i~~~~~-~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p 135 (270)
T cd05056 60 IMRQFDHPHIVKLIG-VITE---NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAA 135 (270)
T ss_pred HHHhCCCCchhceeE-EEcC---CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCh
Confidence 445567888888766 6654 347899999999999999976555789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++..+.+|++|||+++........
T Consensus 136 ~nili~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------------- 163 (270)
T cd05056 136 RNVLVSSPDCVKLGDFGLSRYLEDESYY---------------------------------------------------- 163 (270)
T ss_pred heEEEecCCCeEEccCceeeecccccce----------------------------------------------------
Confidence 9999999999999999998653111000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
..+...++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~ 206 (270)
T cd05056 164 -------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGV 206 (270)
T ss_pred -------------------------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCC
Confidence 0011133567999999988889999999999999999885
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||......... ..+.....++.+...++.+.+++.+||..+|.+|||+.+++.
T Consensus 207 ~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 207 KPFQGVKNNDVI-GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred CCCCCCCHHHHH-HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 77554443333 333333333444566788999999999999999999999876
No 387
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=9.5e-25 Score=217.36 Aligned_cols=272 Identities=19% Similarity=0.293 Sum_probs=224.0
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEE
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (879)
Q Consensus 567 h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd 646 (879)
..+.|+++.|+|.+..|+++++||.+++|++... .....+.|..++.+++|.+ ...+++|+-||.|+.+|
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~--------~l~~~~~~~~plL~c~F~d--~~~~~~G~~dg~vr~~D 81 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN--------SLKLKFKHGAPLLDCAFAD--ESTIVTGGLDGQVRRYD 81 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccch--------hhhhheecCCceeeeeccC--CceEEEeccCceEEEEE
Confidence 3578999999999999999999999999999863 2234467899999999986 68899999999999999
Q ss_pred cCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCe
Q 002801 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHR 726 (879)
Q Consensus 647 ~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~ 726 (879)
+++++.. .+..|..+|.||.+++ ....+++||.|++|++||.+....+.++.....|.|+... ++.|++|..|..
T Consensus 82 ln~~~~~-~igth~~~i~ci~~~~-~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~---g~~LvVg~~~r~ 156 (323)
T KOG1036|consen 82 LNTGNED-QIGTHDEGIRCIEYSY-EVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVS---GNRLVVGTSDRK 156 (323)
T ss_pred ecCCcce-eeccCCCceEEEEeec-cCCeEEEcccCccEEEEeccccccccccccCceEEEEecc---CCEEEEeecCce
Confidence 9988754 4557999999999998 6789999999999999999998888888887889999886 678999999999
Q ss_pred EEEEEcCCCceeeEEEc-cCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCC---------c
Q 002801 727 IYYYDLRNSKIPLCTLI-GHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN---------V 795 (879)
Q Consensus 727 I~iwDl~~~~~~~~~~~-~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~---------~ 795 (879)
|.+||+|+...+..... .-+-.+.+|++. +++-++.+|.||.|.+=.+...... ......|+.|.. +
T Consensus 157 v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~--~skkyaFkCHr~~~~~~~~~yP 234 (323)
T KOG1036|consen 157 VLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEA--QSKKYAFKCHRLSEKDTEIIYP 234 (323)
T ss_pred EEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHH--hhhceeEEeeecccCCceEEEE
Confidence 99999999886553222 334568888887 7888999999999887655543110 133456667743 7
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeC
Q 002801 796 KNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANS 869 (879)
Q Consensus 796 v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~ 869 (879)
|++++|+|--+.|||||.||.|.+||....+.+..+.- -...|.+++|+.+|. .||.|++
T Consensus 235 VNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~-------------~~~SI~slsfs~dG~-~LAia~s 294 (323)
T KOG1036|consen 235 VNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAK-------------YETSISSLSFSMDGS-LLAIASS 294 (323)
T ss_pred eceeEeccccceEEecCCCceEEEccCcchhhhhhccC-------------CCCceEEEEeccCCC-eEEEEec
Confidence 89999999999999999999999999998887776531 133599999999999 9998875
No 388
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.94 E-value=7.6e-27 Score=247.76 Aligned_cols=198 Identities=17% Similarity=0.142 Sum_probs=152.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ ++. ....+++|||+.+++|.++|.+. ..+++..++.++.|++.||+|||++||+|+||||
T Consensus 49 ~l~~l~h~~iv~~~~-~~~---~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p 123 (257)
T cd05060 49 VMAQLDHPCIVRLIG-VCK---GEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAA 123 (257)
T ss_pred HHHhcCCCCeeeEEE-EEc---CCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCccc
Confidence 344567888877665 443 33579999999999999999655 3789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+|++|||+++........ .
T Consensus 124 ~nili~~~~~~kl~df~~~~~~~~~~~~--~------------------------------------------------- 152 (257)
T cd05060 124 RNVLLVNRHQAKISDFGMSRALGAGSDY--Y------------------------------------------------- 152 (257)
T ss_pred ceEEEcCCCcEEeccccccceeecCCcc--c-------------------------------------------------
Confidence 9999999999999999998654211000 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 153 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~ 196 (257)
T cd05060 153 ------------------------------------RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGA 196 (257)
T ss_pred ------------------------------------ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCC
Confidence 00001123567999999988889999999999999999996
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+......+.+...++.+.+++.+||..+|.+||++.++++
T Consensus 197 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 197 KPYGEMKG-AEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred CCcccCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 6544332 3333334333333444556678899999999999999999999875
No 389
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.94 E-value=3.7e-27 Score=255.07 Aligned_cols=207 Identities=16% Similarity=0.263 Sum_probs=160.0
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
...+...+|++++..+. .+. .....|++|||+++++|.+++.. ..+++..++.++.||+.||+|||++||+|+||
T Consensus 68 ~~~l~~l~h~~iv~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl 142 (292)
T cd06657 68 VVIMRDYQHENVVEMYN-SYL--VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDI 142 (292)
T ss_pred HHHHHhcCCcchhheee-EEE--eCCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 33455667888877776 333 24468999999999999998854 35799999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||++........
T Consensus 143 ~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 171 (292)
T cd06657 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVP--------------------------------------------------- 171 (292)
T ss_pred CHHHEEECCCCCEEEcccccceecccccc---------------------------------------------------
Confidence 99999999999999999998754311100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 172 ---------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg 212 (292)
T cd06657 172 ---------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212 (292)
T ss_pred ---------------------------------------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhC
Confidence 0012367889999999988889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcccCC--CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
||..... ......+..... .+.....++.+.+++.+||..+|.+||++.++++||||.....+
T Consensus 213 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 213 EPPYFNEPP-LKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred CCCCCCCCH-HHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 7654332 222222222211 11223456788999999999999999999999999999876543
No 390
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-27 Score=262.02 Aligned_cols=198 Identities=17% Similarity=0.156 Sum_probs=161.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.....+|+|+|.+|+ ++.++. -+|||||+|.||+|.++|++.+..++..+...++.+.+.||+|||++++|||||-.
T Consensus 214 vMr~l~H~NVVr~yG-Va~~~~--Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAA 290 (474)
T KOG0194|consen 214 VMRQLNHPNVVRFYG-VAVLEE--PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAA 290 (474)
T ss_pred HHHhCCCCCEEEEEE-EEcCCC--ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhH
Confidence 344589999999888 877643 57999999999999999988777899999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
.|+|++..+.+||+|||+++...........
T Consensus 291 RNcL~~~~~~vKISDFGLs~~~~~~~~~~~~------------------------------------------------- 321 (474)
T KOG0194|consen 291 RNCLYSKKGVVKISDFGLSRAGSQYVMKKFL------------------------------------------------- 321 (474)
T ss_pred HHheecCCCeEEeCccccccCCcceeecccc-------------------------------------------------
Confidence 9999999999999999998663211000000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.-=...|+|||.+....|++++|||||||++||+++
T Consensus 322 -----------------------------------------~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~ 360 (474)
T KOG0194|consen 322 -----------------------------------------KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGA 360 (474)
T ss_pred -----------------------------------------ccCcceecChhhhccCccccccchhheeeeEEeeeccCC
Confidence 001335999999999999999999999999999998
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.+..........+..+...+.+...+..+..++.+|+..+|++||+|.++.+
T Consensus 361 ~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 361 EPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred CCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 887666655544454655555555566677889999999999999999998865
No 391
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.94 E-value=4.1e-27 Score=253.71 Aligned_cols=201 Identities=15% Similarity=0.214 Sum_probs=150.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC--CCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
.+...+|++++..++ .+.+ ....|++|||+.+ +|.+++.... ..+++..++.++.||+.||+|||++||+||||
T Consensus 51 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl 126 (284)
T cd07836 51 LMKELKHENIVRLHD-VIHT--ENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDL 126 (284)
T ss_pred HHHhhcCCCEeeeee-eEee--CCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence 444557788777766 4433 3467999999975 8988885432 46899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||+++.......
T Consensus 127 ~p~ni~~~~~~~~~l~d~g~~~~~~~~~~--------------------------------------------------- 155 (284)
T cd07836 127 KPQNLLINKRGELKLADFGLARAFGIPVN--------------------------------------------------- 155 (284)
T ss_pred CHHHEEECCCCcEEEeecchhhhhcCCcc---------------------------------------------------
Confidence 99999999999999999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~ 267 (879)
......++.+|+|||.+.+.. ++.++|||||||++|||++
T Consensus 156 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~ 196 (284)
T cd07836 156 ---------------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMIT 196 (284)
T ss_pred ---------------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 001135688999999987654 7899999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcc-------------------cCCC--------chhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 ---PFSTGEEKTRTMSSLRH-------------------RVLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~-------------------~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||............... ...+ ......++.+.+++.+||+.||.+||++.
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 276 (284)
T cd07836 197 GRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAH 276 (284)
T ss_pred CCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHH
Confidence 66543322211111100 0000 01123456788999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
++++||||
T Consensus 277 ~~l~~~~f 284 (284)
T cd07836 277 DALQHPWF 284 (284)
T ss_pred HHhcCCCC
Confidence 99999998
No 392
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.94 E-value=2.1e-27 Score=263.13 Aligned_cols=211 Identities=15% Similarity=0.146 Sum_probs=150.8
Q ss_pred ecccccccCCCCCCcccccccc------------cCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhh
Q 002801 32 LTHGDHLRNQGGLSGVCENEAA------------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lH 99 (879)
+...+|++++..+. .+.+... ...|++|||+. ++|.+++.. ..+++..++.++.||+.||.|||
T Consensus 56 l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH 131 (342)
T cd07854 56 IRRLDHDNIVKVYE-VLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIH 131 (342)
T ss_pred HHhcCCCcchhhHh-hhcccccccccccccccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH
Confidence 44457777776665 2222211 24689999996 599998854 35899999999999999999999
Q ss_pred hcCcccccCCCcceeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCC
Q 002801 100 SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (879)
Q Consensus 100 s~givHrDlKP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (879)
++||+||||||+||+++. ++.+|++|||+++.........+
T Consensus 132 ~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~-------------------------------------- 173 (342)
T cd07854 132 SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKG-------------------------------------- 173 (342)
T ss_pred hCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccccc--------------------------------------
Confidence 999999999999999974 55789999999865311100000
Q ss_pred cccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchh
Q 002801 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYR 257 (879)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwS 257 (879)
......|+.+|+|||.+.+ ..++.++||||
T Consensus 174 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwS 204 (342)
T cd07854 174 -------------------------------------------------YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA 204 (342)
T ss_pred -------------------------------------------------ccccccccccccCHHHHhCccccCchhhHHH
Confidence 0011257889999998755 45889999999
Q ss_pred HHHHHHHhhc---CCCCChhhHhHHhhhccc----------------------C----CC--chhhccChhhHHHHHHhc
Q 002801 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHR----------------------V----LP--PQLLLKFPKEASFCLWLL 306 (879)
Q Consensus 258 lGvil~ell~---pf~~~~~~~~~~~~~~~~----------------------~----~~--~~~~~~~~~~~~li~~~L 306 (879)
|||++|||++ ||............+... . .+ .........+.+|+.+||
T Consensus 205 lGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 284 (342)
T cd07854 205 AGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQIL 284 (342)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHh
Confidence 9999999999 775443322222111100 0 00 111234567889999999
Q ss_pred CCCCCCCCCHHHHhhcccccCCcCchH
Q 002801 307 HPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 307 ~~dP~~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
..||.+|||+.+++.||||+....+..
T Consensus 285 ~~dP~~R~t~~ell~h~~~~~~~~~~~ 311 (342)
T cd07854 285 TFNPMDRLTAEEALMHPYMSCYSCPFD 311 (342)
T ss_pred CCCchhccCHHHHhCCCccccccCCcc
Confidence 999999999999999999986544433
No 393
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.94 E-value=6.9e-27 Score=247.68 Aligned_cols=205 Identities=21% Similarity=0.183 Sum_probs=160.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+......|++|||+.+++|.+++.... .+++.++..++.|++.||.|||+.|++|+||+|
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p 129 (260)
T cd06606 52 ILSSLQHPNIVRYYG-SERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKG 129 (260)
T ss_pred HHHHcCCCCEeeEEE-EEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence 344556888887666 444332356899999999999999996553 789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||.+.........
T Consensus 130 ~ni~i~~~~~~~l~d~~~~~~~~~~~~~---------------------------------------------------- 157 (260)
T cd06606 130 ANILVDSDGVVKLADFGCAKRLGDIETG---------------------------------------------------- 157 (260)
T ss_pred HHEEEcCCCCEEEcccccEEeccccccc----------------------------------------------------
Confidence 9999999999999999998664221000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 158 ------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~ 201 (260)
T cd06606 158 ------------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP 201 (260)
T ss_pred ------------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 00012367888999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc-cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||.........+..+.. ...+......+..+.+++.+||..+|.+||++.++++||||
T Consensus 202 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 202 PWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred CCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 77555433333333332 22333334456788999999999999999999999999997
No 394
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94 E-value=4.7e-27 Score=249.03 Aligned_cols=197 Identities=18% Similarity=0.180 Sum_probs=155.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+....|++++..++ .+. ....+|++|||+++++|.+++.. ....+++..++.++.||+.||.|||++||+|+||||
T Consensus 52 l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p 128 (255)
T cd08219 52 LAKMKHPNIVAFKE-SFE--ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKS 128 (255)
T ss_pred HHhCCCCCcceEEE-EEE--ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCc
Confidence 44556777777666 332 34578999999999999999854 334689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 129 ~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 155 (255)
T cd08219 129 KNIFLTQNGKVKLGDFGSARLLTSPGA----------------------------------------------------- 155 (255)
T ss_pred ceEEECCCCcEEEcccCcceeeccccc-----------------------------------------------------
Confidence 999999999999999999865321100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|++.|+|||++.+..++.++|||||||++|+|++
T Consensus 156 -------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~ 198 (255)
T cd08219 156 -------------------------------------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKH 198 (255)
T ss_pred -------------------------------------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccC
Confidence 0012467889999999988889999999999999999998
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||........ ...+.....++.....+..+.+|+.+||..||.+||++.+++.-
T Consensus 199 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 199 PFQANSWKNL-ILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCHHHH-HHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 7765443332 33334444444444566788999999999999999999999864
No 395
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.94 E-value=3e-27 Score=260.74 Aligned_cols=210 Identities=19% Similarity=0.230 Sum_probs=156.6
Q ss_pred eecccccccCCCCCCccccccc---ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+...+|++++..++ ++.+.. ....|++|||+. ++|.+++.+. ..+++..++.++.||+.||+|||++||+|+|
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~d 128 (330)
T cd07834 52 LLRHLRHENIIGLLD-ILRPPSPEDFNDVYIVTELME-TDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSANVIHRD 128 (330)
T ss_pred HHHhcCCcchhhhhh-hhcccCcccccceEEEecchh-hhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 344556777777665 444332 236799999997 5899999655 4799999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.++++|||++.........
T Consensus 129 lkp~nili~~~~~~~L~dfg~~~~~~~~~~~------------------------------------------------- 159 (330)
T cd07834 129 LKPSNILVNSNCDLKICDFGLARGVDPDEDE------------------------------------------------- 159 (330)
T ss_pred CCHHHEEEcCCCCEEEcccCceEeecccccc-------------------------------------------------
Confidence 9999999999999999999998654221000
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell 266 (879)
+.......++.+|+|||.+.+. .++.++|||||||++|+|+
T Consensus 160 --------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~ 201 (330)
T cd07834 160 --------------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL 201 (330)
T ss_pred --------------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHH
Confidence 0001224679999999999887 7999999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc--C----------------------------CCchhhccChhhHHHHHHhcCCCCCCC
Q 002801 267 C---PFSTGEEKTRTMSSLRHR--V----------------------------LPPQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~--~----------------------------~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
+ ||........ ...+... . ........++.+.+++.+||+.+|.+|
T Consensus 202 ~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 280 (330)
T cd07834 202 TRKPLFPGRDYIDQ-LNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKR 280 (330)
T ss_pred cCCCCcCCCCHHHH-HHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhC
Confidence 9 6644332111 1111100 0 000112245678899999999999999
Q ss_pred CCHHHHhhcccccCCcCc
Q 002801 314 PKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 314 pt~~evl~hp~~~~~~~~ 331 (879)
|+++++++||||.....+
T Consensus 281 pt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 281 ITADEALAHPYLAQLHDP 298 (330)
T ss_pred CCHHHHHhCccHHhhccc
Confidence 999999999999876544
No 396
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94 E-value=3.3e-27 Score=261.61 Aligned_cols=204 Identities=18% Similarity=0.235 Sum_probs=152.3
Q ss_pred ecccccccCCCCCCcccccc----cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 32 LTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~----~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+....|++++.... +...+ .....|+++||+ |++|.+++.. ..+++.+++.++.||+.||+|||+.||+|||
T Consensus 68 l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~d 143 (343)
T cd07851 68 LKHMDHENVIGLLD-VFTPASSLEDFQDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRD 143 (343)
T ss_pred HHhccCCCHHHHHH-HhhccccccccccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 34456777766544 22221 123579999998 7799999965 4689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.++|+|||++......
T Consensus 144 lkp~Nill~~~~~~kL~dfg~~~~~~~~---------------------------------------------------- 171 (343)
T cd07851 144 LKPSNIAVNEDCELKILDFGLARHTDDE---------------------------------------------------- 171 (343)
T ss_pred CCHHHeEECCCCCEEEcccccccccccc----------------------------------------------------
Confidence 9999999999999999999998653111
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell 266 (879)
.....++.+|+|||.+.+. .++.++|||||||++|||+
T Consensus 172 -----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell 210 (343)
T cd07851 172 -----------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 210 (343)
T ss_pred -----------------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHH
Confidence 0123668899999998663 5889999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc-C----------------------------CCchhhccChhhHHHHHHhcCCCCCCCC
Q 002801 267 C---PFSTGEEKTRTMSSLRHR-V----------------------------LPPQLLLKFPKEASFCLWLLHPEPSGRP 314 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~-~----------------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (879)
+ ||............+... . +.......++.+.+|+.+||..+|.+||
T Consensus 211 tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rp 290 (343)
T cd07851 211 TGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRI 290 (343)
T ss_pred hCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCC
Confidence 9 665443322111111000 0 0011123467788999999999999999
Q ss_pred CHHHHhhcccccCCcCch
Q 002801 315 KMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 315 t~~evl~hp~~~~~~~~~ 332 (879)
|+.++++||||.....+.
T Consensus 291 t~~ell~h~~~~~~~~~~ 308 (343)
T cd07851 291 TAAEALAHPYLAEYHDPE 308 (343)
T ss_pred CHHHHhcCCCccccCCCc
Confidence 999999999998765443
No 397
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.94 E-value=3.1e-27 Score=254.89 Aligned_cols=200 Identities=19% Similarity=0.242 Sum_probs=150.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ ++. .....|++|||+++++|.++.... ..+++.+++.++.||+.||+|||++||+|+||+|
T Consensus 53 ~l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p 128 (286)
T cd07846 53 MLKQLRHENLVNLIE-VFR--RKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKP 128 (286)
T ss_pred HHHhcCCcchhhHHH-hcc--cCCeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence 445567777777666 443 344689999999999999887544 4589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 129 ~ni~~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 155 (286)
T cd07846 129 ENILVSQSGVVKLCDFGFARTLAAPGE----------------------------------------------------- 155 (286)
T ss_pred HHEEECCCCcEEEEeeeeeeeccCCcc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~-- 267 (879)
......++.+|+|||.+.+. .++.++|||||||++|||++
T Consensus 156 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~ 198 (286)
T cd07846 156 -------------------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGE 198 (286)
T ss_pred -------------------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCC
Confidence 00123678899999998764 47899999999999999999
Q ss_pred -CCCCChhhHhHHhhhcc---------------------cCCC---------chhhccChhhHHHHHHhcCCCCCCCCCH
Q 002801 268 -PFSTGEEKTRTMSSLRH---------------------RVLP---------PQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~---------------------~~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
||....... ....+.. ...+ ......+..+.+|+.+||..+|.+||++
T Consensus 199 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~ 277 (286)
T cd07846 199 PLFPGDSDID-QLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSS 277 (286)
T ss_pred CCCCCCchHH-HHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhH
Confidence 453322211 1100000 0000 0122345678899999999999999999
Q ss_pred HHHhhcccc
Q 002801 317 GELLQSEFL 325 (879)
Q Consensus 317 ~evl~hp~~ 325 (879)
.++++||||
T Consensus 278 ~~il~~~~~ 286 (286)
T cd07846 278 SQLLHHEFF 286 (286)
T ss_pred HHHhcCCCC
Confidence 999999998
No 398
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.94 E-value=8.9e-27 Score=247.73 Aligned_cols=197 Identities=12% Similarity=0.087 Sum_probs=151.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+....|++++..++ .+. ....|++|||+.+++|.+++... ...+++..+..++.||+.||.|||+.||+|+|||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~ 129 (260)
T cd05069 54 IMKKLRHDKLVPLYA-VVS---EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLR 129 (260)
T ss_pred HHHhCCCCCeeeEEE-EEc---CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccC
Confidence 345567888777665 443 23579999999999999999543 3457899999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++|+|||+++........
T Consensus 130 ~~Nill~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------- 158 (260)
T cd05069 130 AANILVGDNLVCKIADFGLARLIEDNEYT--------------------------------------------------- 158 (260)
T ss_pred cceEEEcCCCeEEECCCccceEccCCccc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g 200 (260)
T cd05069 159 --------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred --------------------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCC
Confidence 0011234667999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....++.....+..+.+++.+||.+||.+||++.++++
T Consensus 201 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 201 RVPYPGMVN-REVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred CCCCCCCCH-HHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 6654333 3333334444334444456678899999999999999999999865
No 399
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=9.3e-27 Score=254.86 Aligned_cols=194 Identities=15% Similarity=0.137 Sum_probs=148.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------CCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ +|.+ ....|++|||+.+++|.+++... ...+++.++..++.||+.||.|||+
T Consensus 76 ~h~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 152 (314)
T cd05099 76 KHKNIINLLG-VCTQ--EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES 152 (314)
T ss_pred CCCCeeeEEE-EEcc--CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 5888877666 5543 34579999999999999999542 1357889999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+|||++.++.+|++|||+++.........
T Consensus 153 ~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------------- 191 (314)
T cd05099 153 RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYK----------------------------------------- 191 (314)
T ss_pred CCeeeccccceeEEEcCCCcEEEcccccccccccccccc-----------------------------------------
Confidence 999999999999999999999999999997642110000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||.+.+..++.++|||||||
T Consensus 192 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~ 224 (314)
T cd05099 192 -----------------------------------------------KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGI 224 (314)
T ss_pred -----------------------------------------------ccccCCCCccccCHHHHccCCcCccchhhHHHH
Confidence 000012345799999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++|||++ ||.... .......+.....++.....+..+.+++.+||..+|++||++.++++
T Consensus 225 ~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 225 LMWEIFTLGGSPYPGIP-VEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999997 564332 23333333333333333455678899999999999999999999875
No 400
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.94 E-value=9.7e-26 Score=236.84 Aligned_cols=280 Identities=19% Similarity=0.298 Sum_probs=219.0
Q ss_pred CCCceecccccCceEEEeecCcEE----EEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCccc-----C
Q 002801 532 RRSGWINPFLEGLCKYLSFSKLRV----KADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII-----N 602 (879)
Q Consensus 532 ~~~~~~~~~~d~~i~~w~~~~~~~----~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~-----~ 602 (879)
.+..|++|+.|..|++||+..+.. .+.|+. .....|+++.|++.|..|++.+..-.++|+|-+... .
T Consensus 178 ~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P----~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~K 253 (641)
T KOG0772|consen 178 SGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQP----CETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSK 253 (641)
T ss_pred CCceeeeccccceEEEEecccccccchhhhccCc----ccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeec
Confidence 367789999999999999986432 233322 345789999999999999988888899999977521 1
Q ss_pred cCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe-EEEEec-----cCCCcEEEEEEecCCCCEE
Q 002801 603 ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-VLTEMR-----EHERRVWSIDFSSADPTLL 676 (879)
Q Consensus 603 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~-~~~~~~-----~h~~~v~sv~~sp~~~~~l 676 (879)
....+.......+|...++|.+|+|.+++.++++++||+++|||++..+ ....++ +-.-++++++|++ +++.|
T Consensus 254 GDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nr-dg~~i 332 (641)
T KOG0772|consen 254 GDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNR-DGKLI 332 (641)
T ss_pred cchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCC-Ccchh
Confidence 1222222333456888999999999999999999999999999997653 222332 2334789999999 99999
Q ss_pred EEEeCCCcEEEEeCCCCce--EEEEe--c--CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccC--CCC
Q 002801 677 ASGSDDGSVKLWSINQGVS--IGTIK--T--KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH--NKT 748 (879)
Q Consensus 677 asgs~Dg~V~iwd~~~~~~--i~~~~--~--~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h--~~~ 748 (879)
|+|+.||+|.+||.+.... ...+. | ...|+||.|+++ |++|++-+.|+++++||||+.+.|+.+..+- ..+
T Consensus 333 Aagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~d-g~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~ 411 (641)
T KOG0772|consen 333 AAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYD-GNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFP 411 (641)
T ss_pred hhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccc-cchhhhccCCCceeeeeccccccchhhhcCCCccCC
Confidence 9999999999999865422 22222 2 236999999999 9999999999999999999999888877653 345
Q ss_pred EEEEEEc-CCCEEEEEE------cCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 749 VSYVKFV-DATTLVSAS------TDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 749 V~~v~fs-~~~~l~s~s------~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
-+.++|+ +.++|+||+ ..++|.+||..+. ..+..+.-.+..|..+.|+|.=+.|..|+.||.++||.
T Consensus 412 ~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~------d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 412 GTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTL------DTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred CCccccCCCceEEEecccccCCCCCceEEEEeccce------eeEEEecCCCceEEEEeecchhhheeeecCCCceEEEE
Confidence 6788999 888898875 3578999999886 55666666677888999999988888899999999997
Q ss_pred cC
Q 002801 822 KA 823 (879)
Q Consensus 822 ~~ 823 (879)
-.
T Consensus 486 dp 487 (641)
T KOG0772|consen 486 DP 487 (641)
T ss_pred Cc
Confidence 43
No 401
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.94 E-value=7.4e-27 Score=251.27 Aligned_cols=198 Identities=16% Similarity=0.092 Sum_probs=151.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC--------------CCCChhHHHHHHHHHHHHHHh
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------------RSVDVYECLHIFRQIVEIVYA 97 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------------~~l~~~~~~~i~~qi~~~l~~ 97 (879)
+....|++++..++ .+.+ ....|++|||+.+++|.+++.... ..+++..++.++.||+.||+|
T Consensus 61 l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~ 137 (280)
T cd05092 61 LTVLQHQHIVRFYG-VCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVY 137 (280)
T ss_pred HhcCCCCCCceEEE-EEec--CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHH
Confidence 34457788877665 4443 345799999999999999985432 247899999999999999999
Q ss_pred hhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCC
Q 002801 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (879)
Q Consensus 98 lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (879)
||++||+||||||+|||++.++.+|++|||+++........
T Consensus 138 LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~--------------------------------------- 178 (280)
T cd05092 138 LASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY--------------------------------------- 178 (280)
T ss_pred HHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCcee---------------------------------------
Confidence 99999999999999999999999999999998653111000
Q ss_pred CcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchh
Q 002801 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (879)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (879)
.......+++.|+|||.+.+..++.++||||
T Consensus 179 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 209 (280)
T cd05092 179 -------------------------------------------------RVGGRTMLPIRWMPPESILYRKFTTESDIWS 209 (280)
T ss_pred -------------------------------------------------ecCCCccccccccCHHHhccCCcCchhhHHH
Confidence 0001124467899999999888999999999
Q ss_pred HHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 258 lGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|||++|||++ ||......... ........++.....++.+.+++.+||+.||.+||++.++++
T Consensus 210 lG~il~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 210 FGVVLWEIFTYGKQPWYQLSNTEAI-ECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHHHHHHHcCCCCCCccCCHHHHH-HHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9999999986 66444333332 223333233334456788999999999999999999999875
No 402
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.94 E-value=4.7e-27 Score=250.85 Aligned_cols=200 Identities=21% Similarity=0.220 Sum_probs=154.1
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
...+...+|++++..++ .+.+ ....|++|||+++++|.+++. .....+++..++.++.||+.||+|||++||+|
T Consensus 53 ~~~l~~l~h~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 129 (267)
T cd08228 53 IDLLKQLNHPNVIKYLD-SFIE--DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMH 129 (267)
T ss_pred HHHHHhCCCcceeeeee-eEEE--CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeC
Confidence 33455667888887776 3332 346899999999999998883 23345899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
+||||+||+++.++.++++|||++........
T Consensus 130 ~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------ 161 (267)
T cd08228 130 RDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------------ 161 (267)
T ss_pred CCCCHHHEEEcCCCCEEECccccceeccchhH------------------------------------------------
Confidence 99999999999999999999999865321100
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
......|+..|+|||.+.+..++.++|||||||++|||
T Consensus 162 ------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el 199 (267)
T cd08228 162 ------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199 (267)
T ss_pred ------------------------------------------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHH
Confidence 00123678889999999888899999999999999999
Q ss_pred hc---CCCCChhh-HhHHhhhcccCCCchh-hccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 266 FC---PFSTGEEK-TRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 266 l~---pf~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++ ||...... ......+.....++.. ...+..+.+++.+||..+|++||++.++++
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 200 AALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred hcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 98 77544322 2233333333333332 245567899999999999999999999987
No 403
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.94 E-value=6.3e-27 Score=249.91 Aligned_cols=200 Identities=14% Similarity=0.131 Sum_probs=154.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .+. .....|++|||++|++|.+++.+....+++.+++.|+.||+.||+|||++||+||||||
T Consensus 58 ~l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp 134 (267)
T cd05066 58 IMGQFDHPNIIHLEG-VVT--KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAA 134 (267)
T ss_pred HHHhCCCCCcceEEE-EEe--cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhch
Confidence 445567888888766 443 23468999999999999999976656789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.++++|||+++........ .
T Consensus 135 ~nili~~~~~~~l~dfg~~~~~~~~~~~--~------------------------------------------------- 163 (267)
T cd05066 135 RNILVNSNLVCKVSDFGLSRVLEDDPEA--A------------------------------------------------- 163 (267)
T ss_pred hcEEECCCCeEEeCCCCcccccccccce--e-------------------------------------------------
Confidence 9999999999999999999764211000 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 ------------------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~ 207 (267)
T cd05066 164 ------------------------------------YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 207 (267)
T ss_pred ------------------------------------eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCC
Confidence 00011133567999999998889999999999999999875
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||....... ....+.....++.....++.+.+++.+||+++|.+||++.++++
T Consensus 208 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 208 RPYWEMSNQD-VIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CCcccCCHHH-HHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 665443322 22333333334444556778899999999999999999999875
No 404
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.94 E-value=9.7e-27 Score=248.93 Aligned_cols=191 Identities=14% Similarity=0.124 Sum_probs=145.9
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------CCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ .+.. ...+|++|||+.+++|.+++.... ..+++..++.++.||+.||+|||+
T Consensus 54 ~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~ 130 (270)
T cd05047 54 HHPNIINLLG-ACEH--RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 130 (270)
T ss_pred cCCCeeeEEE-EEec--CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6777777666 4443 345899999999999999985421 247899999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
.||+||||||+||+++.++.+|++|||+++..... .
T Consensus 131 ~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~--~------------------------------------------ 166 (270)
T cd05047 131 KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--V------------------------------------------ 166 (270)
T ss_pred CCEeecccccceEEEcCCCeEEECCCCCccccchh--h------------------------------------------
Confidence 99999999999999999999999999997531000 0
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
.......+..|+|||++.+..++.++|||||||
T Consensus 167 -----------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~ 199 (270)
T cd05047 167 -----------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 199 (270)
T ss_pred -----------------------------------------------hccCCCCccccCChHHHccCCCCchhhHHHHHH
Confidence 000012255699999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++|||++ ||..... ......+......+.....+..+.+++.+||..+|.+|||+.++++
T Consensus 200 il~el~~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 200 LLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred HHHHHHcCCCCCccccCH-HHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 9999995 7744332 2223333333233333445677889999999999999999999976
No 405
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.94 E-value=9.3e-27 Score=246.66 Aligned_cols=200 Identities=22% Similarity=0.249 Sum_probs=158.5
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
+...+|++++...+. ..+ ....+++|||++|++|.+++... ...+++.++..++.||+.||.|||++||+|+||
T Consensus 53 l~~l~~~~~~~~~~~-~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl 129 (258)
T cd08215 53 LKKLNHPNIIKYYES-FEE--KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDI 129 (258)
T ss_pred HHhcCCCChhheEEE-Eec--CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccC
Confidence 444567777776652 222 25789999999999999999553 367899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
+|+||+++.++.++++|||.+........
T Consensus 130 ~~~nil~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------------- 158 (258)
T cd08215 130 KPQNIFLTSNGLVKLGDFGISKVLSSTVD--------------------------------------------------- 158 (258)
T ss_pred ChHHeEEcCCCcEEECCccceeecccCcc---------------------------------------------------
Confidence 99999999999999999999865322100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
......|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 159 ---------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g 199 (258)
T cd08215 159 ---------------------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTL 199 (258)
T ss_pred ---------------------------------------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcC
Confidence 0012367888999999988889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..... ......+.....++.....+..+.+++.+||..+|++||++.++++||||
T Consensus 200 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 200 KHPFEGENL-LELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred CCCCCCCcH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 6654432 33333333333444444566788999999999999999999999999997
No 406
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.94 E-value=1.2e-26 Score=253.66 Aligned_cols=214 Identities=14% Similarity=0.161 Sum_probs=150.5
Q ss_pred eecccccccCCCCCCccccccc------ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
.+...+|++++..++ .+.+.. ...+|++|||+.+ +|..++......+++.+++.++.||++||+|||++||+
T Consensus 60 ~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~ 137 (311)
T cd07866 60 ILKKLKHPNVVPLID-MAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHIL 137 (311)
T ss_pred HHHhcCCCCccchhh-heecccccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 344557777777665 332222 2357999999865 67777755556799999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
|+||||+||+++.++.++++|||+++...........
T Consensus 138 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~------------------------------------------- 174 (311)
T cd07866 138 HRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG------------------------------------------- 174 (311)
T ss_pred cCCCCHHHEEECCCCCEEECcCccchhccCCCccccc-------------------------------------------
Confidence 9999999999999999999999999764221100000
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ 263 (879)
.........+...|++.|+|||.+.+. .++.++|||||||++|
T Consensus 175 ------------------------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~ 218 (311)
T cd07866 175 ------------------------------------GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFA 218 (311)
T ss_pred ------------------------------------CCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHH
Confidence 000000012345789999999988764 4899999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhh--ccc----------------------CCCc----hhhccChhhHHHHHHhcCCCCCC
Q 002801 264 ELFC---PFSTGEEKTRTMSSL--RHR----------------------VLPP----QLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~--~~~----------------------~~~~----~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
||++ ||............. ... ..++ .+....+.+.+||.+||..||.+
T Consensus 219 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 298 (311)
T cd07866 219 EMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYK 298 (311)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCccc
Confidence 9999 553332211111100 000 0011 11223456789999999999999
Q ss_pred CCCHHHHhhcccc
Q 002801 313 RPKMGELLQSEFL 325 (879)
Q Consensus 313 Rpt~~evl~hp~~ 325 (879)
|||+.+++.||||
T Consensus 299 R~t~~ell~~~~f 311 (311)
T cd07866 299 RLTASDALEHPYF 311 (311)
T ss_pred CcCHHHHhcCCCC
Confidence 9999999999998
No 407
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.94 E-value=8.5e-27 Score=250.39 Aligned_cols=202 Identities=18% Similarity=0.194 Sum_probs=157.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|+||||+.+++|.+++.. ..+++..+..++.||+.||.|||+.||+|+||||
T Consensus 55 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p 129 (277)
T cd06641 55 VLSQCDSPYVTKYYG-SYLK--DTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKA 129 (277)
T ss_pred HHHhcCCCCEeEEEE-EEEe--CCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCH
Confidence 445567888877766 3332 3468999999999999999954 3589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||+++.......
T Consensus 130 ~Ni~i~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 156 (277)
T cd06641 130 ANVLLSEHGEVKLADFGVAGQLTDTQI----------------------------------------------------- 156 (277)
T ss_pred HhEEECCCCCEEEeecccceecccchh-----------------------------------------------------
Confidence 999999999999999998865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|+.+|+|||.+.+..++.++|||||||++|||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 199 (277)
T cd06641 157 -------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEP 199 (277)
T ss_pred -------------------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 0012367889999999988888999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||..... ......+.....+......+..+.+++.+||..+|.+||++.++++||||...
T Consensus 200 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 200 PHSELHP-MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred CCCccch-HHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 6643332 22222222232333333456778999999999999999999999999999863
No 408
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.94 E-value=6.2e-27 Score=253.99 Aligned_cols=198 Identities=15% Similarity=0.117 Sum_probs=148.5
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC----------CCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~----------~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
+....|++++..++ .+.++ ...+++|||+.+++|.++|.+.. ..+++..++.++.||+.||+|||++
T Consensus 73 l~~l~~~~i~~~~~-~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~ 149 (296)
T cd05051 73 LSRLSDPNIARLLG-VCTVD--PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL 149 (296)
T ss_pred HHhcCCCCEeEEEE-EEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 44456777777665 44433 56899999999999999995432 2689999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+||+++.++.++++|||+++........
T Consensus 150 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------- 186 (296)
T cd05051 150 NFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYY------------------------------------------- 186 (296)
T ss_pred CccccccchhceeecCCCceEEccccceeecccCcce-------------------------------------------
Confidence 9999999999999999999999999998653111000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......++..|+|||.+.+..++.++|||||||+
T Consensus 187 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 221 (296)
T cd05051 187 ---------------------------------------------RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVT 221 (296)
T ss_pred ---------------------------------------------eecCcCCCCceecCHHHhhcCCCCccchhhhhHHH
Confidence 00012355778999999988889999999999999
Q ss_pred HHHhhc-----CCCCChhhHhHHhhhcc-------cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 262 LFELFC-----PFSTGEEKTRTMSSLRH-------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 262 l~ell~-----pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||++ ||....... ....+.. ....+.....++.+.+++.+||..||.+|||+.++++
T Consensus 222 l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 222 LWEILTLCREQPYEHLTDQQ-VIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHhcCCCCCCCCcChHH-HHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 999986 554332222 2222111 1112223344578899999999999999999999965
No 409
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.94 E-value=1.6e-26 Score=245.91 Aligned_cols=196 Identities=15% Similarity=0.138 Sum_probs=153.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+...+|++++..++ .+.+ ....|++|||+++++|.+++.+ ....+++..++.++.||+.||.|||++||+|+||||
T Consensus 56 l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~ 132 (261)
T cd05148 56 LKRLRHKHLISLFA-VCSV--GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAA 132 (261)
T ss_pred HhcCCCcchhheee-eEec--CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCc
Confidence 44557888877666 4433 3467999999999999999955 335689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||.+.........
T Consensus 133 ~nilv~~~~~~kl~d~g~~~~~~~~~~~---------------------------------------------------- 160 (261)
T cd05148 133 RNILVGEDLVCKVADFGLARLIKEDVYL---------------------------------------------------- 160 (261)
T ss_pred ceEEEcCCceEEEccccchhhcCCcccc----------------------------------------------------
Confidence 9999999999999999998654211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.....++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 161 --------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~ 202 (261)
T cd05148 161 --------------------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQ 202 (261)
T ss_pred --------------------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 001234667999999988889999999999999999996
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....++.....++.+.+++.+||..||.+|||+.++++
T Consensus 203 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 203 VPYPGMNN-HEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred CCCCcCCH-HHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 6644332 2233333333344445566788999999999999999999999875
No 410
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.94 E-value=5.8e-27 Score=259.60 Aligned_cols=205 Identities=16% Similarity=0.228 Sum_probs=151.9
Q ss_pred ceeecccccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
...+....|++++..++ ++.... ....|++|||+. .+|..++. ..+++.++..++.||+.||+|||++||+
T Consensus 65 ~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~ 139 (342)
T cd07879 65 LTLLKHMQHENVIGLLD-VFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGII 139 (342)
T ss_pred HHHHHhcCCCCccchhh-eecccccCCCCceEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 33455567888877666 443221 124589999985 47877763 3589999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+||+++.++.+|++|||+++.....
T Consensus 140 H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~------------------------------------------------- 170 (342)
T cd07879 140 HRDLKPGNLAVNEDCELKILDFGLARHADAE------------------------------------------------- 170 (342)
T ss_pred cCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-------------------------------------------------
Confidence 9999999999999999999999998652110
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ 263 (879)
.....|+++|+|||.+.+ ..++.++|||||||+||
T Consensus 171 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~ 206 (342)
T cd07879 171 --------------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMA 206 (342)
T ss_pred --------------------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHHHH
Confidence 012367889999999876 45899999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhcc------------------------cCCC-----chhhccChhhHHHHHHhcCCCCC
Q 002801 264 ELFC---PFSTGEEKTRTMSSLRH------------------------RVLP-----PQLLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~~------------------------~~~~-----~~~~~~~~~~~~li~~~L~~dP~ 311 (879)
||++ ||............+.. ...+ ..+...++.+.+||.+||+.||.
T Consensus 207 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 286 (342)
T cd07879 207 EMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVD 286 (342)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChh
Confidence 9999 77544322111111100 0000 11123456788999999999999
Q ss_pred CCCCHHHHhhcccccCCcCc
Q 002801 312 GRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 312 ~Rpt~~evl~hp~~~~~~~~ 331 (879)
+||++.+++.||||......
T Consensus 287 ~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 287 KRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hCcCHHHHhcCcchhhcccc
Confidence 99999999999999886543
No 411
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.94 E-value=1.1e-26 Score=251.01 Aligned_cols=202 Identities=16% Similarity=0.160 Sum_probs=149.7
Q ss_pred eccc-ccccCCCCCCcccccccccCceEEEEeeCCcchhhh---h-cCCCCCCChhHHHHHHHHHHHHHHhhhhc-Cccc
Q 002801 32 LTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQW---L-DKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 105 (879)
Q Consensus 32 ~~~~-~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~---l-~~~~~~l~~~~~~~i~~qi~~~l~~lHs~-givH 105 (879)
+.+. +|++++..++ .+.+ ....|++|||+.+ +|.++ + ......+++..+..++.|++.||+|||+. ||+|
T Consensus 56 l~~~~~~~~iv~~~~-~~~~--~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H 131 (288)
T cd06616 56 VMRSSDCPYIVKFYG-ALFR--EGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIH 131 (288)
T ss_pred HHHhcCCCCEeeeee-EEec--CCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeec
Confidence 3343 4788877776 4433 3467999999854 54443 3 12235789999999999999999999975 9999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+||+++.++.+|++|||+++......
T Consensus 132 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------- 162 (288)
T cd06616 132 RDVKPSNILLDRNGNIKLCDFGISGQLVDSI------------------------------------------------- 162 (288)
T ss_pred cCCCHHHEEEccCCcEEEeecchhHHhccCC-------------------------------------------------
Confidence 9999999999999999999999986531110
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC---CCCccCcchhHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 262 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvil 262 (879)
......|+..|+|||++.+. .++.++|||||||++
T Consensus 163 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il 200 (288)
T cd06616 163 ------------------------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITL 200 (288)
T ss_pred ------------------------------------------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHH
Confidence 00113578889999999876 589999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhcccCCCc----hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
|||++ ||.........+........+. .....++.+.+|+.+||..+|++|||+.+++.||||...
T Consensus 201 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 201 YEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred HHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 99998 7754432222222222221111 112356788999999999999999999999999999764
No 412
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.94 E-value=7.6e-27 Score=251.54 Aligned_cols=201 Identities=16% Similarity=0.209 Sum_probs=151.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+.+ ....|++|||+. ++|.+++.... ..+++..++.++.||+.||+|||++|++|+||+
T Consensus 51 ~l~~l~~~~iv~~~~-~~~~--~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~ 126 (283)
T cd07835 51 LLKELNHPNIVRLLD-VVHS--ENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLK 126 (283)
T ss_pred HHHhcCCCCccCHhh-eecc--CCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence 345567888877776 4443 356899999994 68999985543 368999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||+++.......
T Consensus 127 p~nil~~~~~~~~l~df~~~~~~~~~~~---------------------------------------------------- 154 (283)
T cd07835 127 PQNLLIDREGALKLADFGLARAFGVPVR---------------------------------------------------- 154 (283)
T ss_pred HHHEEEcCCCcEEEeecccccccCCCcc----------------------------------------------------
Confidence 9999999999999999999865321100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~- 267 (879)
......++..|+|||.+.+. .++.++|||||||++|||++
T Consensus 155 --------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 196 (283)
T cd07835 155 --------------------------------------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNR 196 (283)
T ss_pred --------------------------------------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhC
Confidence 00112557889999988765 47999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcc------------------------c---CCCchhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 --PFSTGEEKTRTMSSLRH------------------------R---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~------------------------~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||.............+. . .........++.+.++|.+||+.+|.+|||+.|
T Consensus 197 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 276 (283)
T cd07835 197 RPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKA 276 (283)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence 66544332222111110 0 000112234467889999999999999999999
Q ss_pred Hhhcccc
Q 002801 319 LLQSEFL 325 (879)
Q Consensus 319 vl~hp~~ 325 (879)
+++||||
T Consensus 277 il~~~~~ 283 (283)
T cd07835 277 ALQHPYF 283 (283)
T ss_pred HhcCCCC
Confidence 9999998
No 413
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.94 E-value=8.1e-27 Score=247.39 Aligned_cols=194 Identities=14% Similarity=0.109 Sum_probs=151.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+.+ ....|++|||+++++|.++++... ..+++..+..++.|++.||.|||++||+|+|||
T Consensus 53 ~l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~ 129 (256)
T cd05039 53 VMTTLRHPNLVQLLG-VVLQ--GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLA 129 (256)
T ss_pred HHHhcCCcceeeeEE-EEcC--CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcc
Confidence 344556778777666 4443 456899999999999999995443 368999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||.++......
T Consensus 130 p~Nili~~~~~~~l~d~g~~~~~~~~~----------------------------------------------------- 156 (256)
T cd05039 130 ARNVLVSEDLVAKVSDFGLAKEASQGQ----------------------------------------------------- 156 (256)
T ss_pred cceEEEeCCCCEEEccccccccccccc-----------------------------------------------------
Confidence 999999999999999999986531100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
....++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ----------------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g 196 (256)
T cd05039 157 ----------------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 196 (256)
T ss_pred ----------------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcC
Confidence 00123456999999988889999999999999999986
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||... ........+.....+......++.+.+++.+||..+|++||++.++++
T Consensus 197 ~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 197 RVPYPRI-PLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred CCCCCCC-CHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 66443 223333333333333333455678899999999999999999999875
No 414
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.94 E-value=7.2e-27 Score=254.39 Aligned_cols=198 Identities=17% Similarity=0.109 Sum_probs=152.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|+|++..++ .|... ..++++||+.+|+|.+++......+++..+..++.||+.||.|||++||+||||||
T Consensus 62 ~~~~l~h~niv~~~~-~~~~~---~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp 137 (303)
T cd05110 62 IMASMDHPHLVRLLG-VCLSP---TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAA 137 (303)
T ss_pred HHHhCCCCCcccEEE-EEcCC---CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeecccccc
Confidence 345567888888776 55432 46799999999999999976656789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++........
T Consensus 138 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~---------------------------------------------------- 165 (303)
T cd05110 138 RNVLVKSPNHVKITDFGLARLLEGDEKE---------------------------------------------------- 165 (303)
T ss_pred ceeeecCCCceEEccccccccccCcccc----------------------------------------------------
Confidence 9999999999999999999754211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 ------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~ 209 (303)
T cd05110 166 ------------------------------------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 209 (303)
T ss_pred ------------------------------------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCC
Confidence 00011244678999999998889999999999999999985
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+.....++........+.+++.+||..+|++||++.++++
T Consensus 210 ~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 210 KPYDGIP-TREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred CCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 664432 22222333333333334455678899999999999999999999876
No 415
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.94 E-value=1.3e-26 Score=244.94 Aligned_cols=198 Identities=17% Similarity=0.188 Sum_probs=150.5
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+.+ ....|++|||+.|++|.+++.+....+++..++.++.|++.||+|||++||+||||||+
T Consensus 46 l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~ 122 (251)
T cd05041 46 LKQYDHPNIVKLIG-VCVQ--KQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAAR 122 (251)
T ss_pred HHhCCCCCeEEEEE-EEec--CCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcc
Confidence 44557777766555 4433 34689999999999999999665567899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||+++........ .
T Consensus 123 nili~~~~~~~l~d~g~~~~~~~~~~~--~-------------------------------------------------- 150 (251)
T cd05041 123 NCLVGENNVLKISDFGMSREEEGGIYT--V-------------------------------------------------- 150 (251)
T ss_pred eEEEcCCCcEEEeeccccccccCCcce--e--------------------------------------------------
Confidence 999999999999999998653211000 0
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 151 ------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~ 194 (251)
T cd05041 151 ------------------------------------SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDT 194 (251)
T ss_pred ------------------------------------ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCC
Confidence 0000122456999999988889999999999999999997
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+......+.....+..+.+++.+||..+|.+||++.|+++
T Consensus 195 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 195 PYPGMSN-QQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred CCccCCH-HHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 5644332 2222233332222333455678899999999999999999999986
No 416
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=2.9e-27 Score=267.61 Aligned_cols=206 Identities=18% Similarity=0.194 Sum_probs=169.5
Q ss_pred cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-------------CCCCChhHHHHH
Q 002801 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-------------KRSVDVYECLHI 87 (879)
Q Consensus 21 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-------------~~~l~~~~~~~i 87 (879)
..||+|.+ .++..+|+|+|.+++ +|.+ +.-++||.|||..|+|.++|+.. +.+|+..+.++|
T Consensus 534 ~dF~REae--Lla~l~H~nIVrLlG-VC~~--~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~i 608 (774)
T KOG1026|consen 534 QDFRREAE--LLAELQHPNIVRLLG-VCRE--GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHI 608 (774)
T ss_pred HHHHHHHH--HHHhccCCCeEEEEE-EEcc--CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHH
Confidence 45776655 467789999999888 9975 34579999999999999999421 123888999999
Q ss_pred HHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcc
Q 002801 88 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 167 (879)
Q Consensus 88 ~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (879)
+.||+.|++||-++.+|||||-..|.|+.+.-.|||+|||++++.-+...- |..
T Consensus 609 A~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYY--------------------------k~~ 662 (774)
T KOG1026|consen 609 ATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYY--------------------------KVR 662 (774)
T ss_pred HHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhh--------------------------ccc
Confidence 999999999999999999999999999999999999999999885221110 000
Q ss_pred ccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC
Q 002801 168 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 247 (879)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 247 (879)
.. -+=...|||||.|..+
T Consensus 663 ~~--------------------------------------------------------------t~lPIRWMppEsIly~ 680 (774)
T KOG1026|consen 663 GN--------------------------------------------------------------TLLPIRWMPPESILYG 680 (774)
T ss_pred CC--------------------------------------------------------------ceeeeecCCHHHhhcC
Confidence 00 0114469999999999
Q ss_pred CCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 248 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 248 ~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
.|+++|||||+||+|||+++ ||+.. .+.+.+..++.+..-+.+..++.++..|+..||+.+|++||++.||-
T Consensus 681 kFTteSDVWs~GVvLWEIFsyG~QPy~gl-Sn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 681 KFTTESDVWSFGVVLWEIFSYGKQPYYGL-SNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred cccchhhhhhhhhhhhhhhccccCccccc-chHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 99999999999999999999 88654 45566777777777788888999999999999999999999999984
No 417
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.94 E-value=1.5e-26 Score=249.70 Aligned_cols=201 Identities=15% Similarity=0.173 Sum_probs=149.8
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ .+.+ ....|++|||++++.|..++++. ..+++.++..++.||+.||.|||++||+|+||||+
T Consensus 54 l~~l~~~~i~~~~~-~~~~--~~~~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ 129 (288)
T cd07833 54 LRQLRHENIVNLKE-AFRR--KGRLYLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPE 129 (288)
T ss_pred HHhcCCCCeeehhh-eEEE--CCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence 33445777766665 4433 44689999999987777666443 56899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+||+|||++.........
T Consensus 130 ni~~~~~~~~kl~d~g~~~~~~~~~~~----------------------------------------------------- 156 (288)
T cd07833 130 NILVSESGVLKLCDFGFARALRARPAS----------------------------------------------------- 156 (288)
T ss_pred HeEECCCCCEEEEeeecccccCCCccc-----------------------------------------------------
Confidence 999999999999999998664211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc---
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~--- 267 (879)
......++.+|+|||++.+. .++.++|||||||+||||++
T Consensus 157 ------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 200 (288)
T cd07833 157 ------------------------------------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEP 200 (288)
T ss_pred ------------------------------------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 00224678999999999888 78999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--c-----------------c-CCCc----------hhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 PFSTGEEKTRTMSSLR--H-----------------R-VLPP----------QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~-----------------~-~~~~----------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.............. . . ..++ .....++.+.+||.+||..+|++||+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 280 (288)
T cd07833 201 LFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCD 280 (288)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHH
Confidence 5543322221111000 0 0 0000 0011256788999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
++++||||
T Consensus 281 ~il~~~~f 288 (288)
T cd07833 281 ELLQHPYF 288 (288)
T ss_pred HHhcCCCC
Confidence 99999997
No 418
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.94 E-value=2e-26 Score=246.30 Aligned_cols=198 Identities=16% Similarity=0.125 Sum_probs=144.8
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
+...+|++++..++ .|.+ ....|++|||+.+++|.+++.+. ...+++..++.++.||+.||+|||++||+||||
T Consensus 49 ~~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~di 125 (268)
T cd05086 49 YRILQHPNILQCLG-QCVE--AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDL 125 (268)
T ss_pred HhccCCcchhheEE-EecC--CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 34467888888776 5543 34679999999999999999543 234677788999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+|||++.++.+|++|||++.........
T Consensus 126 kp~nil~~~~~~~~l~Dfg~~~~~~~~~~~-------------------------------------------------- 155 (268)
T cd05086 126 ALRNCFLTSDLTVKVGDYGIGPSRYKEDYI-------------------------------------------------- 155 (268)
T ss_pred ccceEEEcCCccEEecccccccccCcchhh--------------------------------------------------
Confidence 999999999999999999987532100000
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-------CCCCccCcchhHHHH
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDIYRLGVL 261 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~~~~sDIwSlGvi 261 (879)
.......|+..|+|||++.. ..++.++|||||||+
T Consensus 156 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~ 197 (268)
T cd05086 156 --------------------------------------ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVT 197 (268)
T ss_pred --------------------------------------hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHH
Confidence 00012367888999998853 235789999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccC---C-CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRV---L-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||++ ||............+.... . +.......+.+.+++..|| .+|.+||++.++++
T Consensus 198 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 198 LWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 999986 6654443333332222221 1 2222345567889999999 67999999999975
No 419
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94 E-value=6.6e-27 Score=251.81 Aligned_cols=201 Identities=19% Similarity=0.262 Sum_probs=152.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ...+|++|||+++ +|.+++......+++.+++.++.||+.||.|||++||+|+||||
T Consensus 51 ~l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p 126 (283)
T cd05118 51 LLKELNHPNIIKLLD-VFRH--KGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKP 126 (283)
T ss_pred HHHHhcCCCcchHHH-hhcc--CCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCH
Confidence 344556777777666 4443 3578999999975 88888866556899999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||.+........
T Consensus 127 ~nili~~~~~~~l~df~~~~~~~~~~~----------------------------------------------------- 153 (283)
T cd05118 127 ENLLINTEGVLKLADFGLARSFGSPVR----------------------------------------------------- 153 (283)
T ss_pred HHEEECCCCcEEEeeeeeeEecCCCcc-----------------------------------------------------
Confidence 999999999999999999865422100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~-- 267 (879)
......++.+|+|||.+.+. .++.++|||||||++|+|++
T Consensus 154 -------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~ 196 (283)
T cd05118 154 -------------------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR 196 (283)
T ss_pred -------------------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCC
Confidence 00113568899999999876 68999999999999999999
Q ss_pred -CCCCChhhHhHHhhhccc----------------------------CCCchhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 -PFSTGEEKTRTMSSLRHR----------------------------VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||................ .........+.++.+||.+||.+||.+||++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 276 (283)
T cd05118 197 PLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQ 276 (283)
T ss_pred CCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHH
Confidence 564433222111111000 000112235677889999999999999999999
Q ss_pred Hhhcccc
Q 002801 319 LLQSEFL 325 (879)
Q Consensus 319 vl~hp~~ 325 (879)
++.||||
T Consensus 277 ll~~~~~ 283 (283)
T cd05118 277 ALAHPYF 283 (283)
T ss_pred HhhCCCC
Confidence 9999997
No 420
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.94 E-value=2.1e-27 Score=252.41 Aligned_cols=199 Identities=23% Similarity=0.234 Sum_probs=150.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|+|++..++ +|.+ ....++||||+.+|+|.++|... ...+++..+..|+.||+.||.|||+++|+|+||+
T Consensus 54 ~l~~l~h~ni~~~~g-~~~~--~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~ 130 (259)
T PF07714_consen 54 ILRKLRHPNIVKLYG-FCIE--NEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLS 130 (259)
T ss_dssp HHHTHSBTTBE-EEE-EEES--SSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred ccccccccccccccc-cccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 444568888888776 6762 33489999999999999999654 5678999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+||+|||+++........
T Consensus 131 ~~nill~~~~~~Kl~~f~~~~~~~~~~~~--------------------------------------------------- 159 (259)
T PF07714_consen 131 PSNILLDSNGQVKLSDFGLSRPISEKSKY--------------------------------------------------- 159 (259)
T ss_dssp GGGEEEETTTEEEEESTTTGEETTTSSSE---------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccc---------------------------------------------------
Confidence 99999999999999999998653111000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.......+...|+|||.+.+..++.++||||||+++|||++
T Consensus 160 -------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~ 202 (259)
T PF07714_consen 160 -------------------------------------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLG 202 (259)
T ss_dssp -------------------------------------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTS
T ss_pred -------------------------------------ccccccccccccccccccccccccccccccccccccccccccc
Confidence 00011245677999999988889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||... ........+.....++.....+..+.+++..||..+|.+||++.++++
T Consensus 203 ~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 203 KFPFSDY-DNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp SGTTTTS-CHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccc-ccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 66554 333344444444444455556788999999999999999999999975
No 421
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.94 E-value=1.4e-26 Score=249.86 Aligned_cols=200 Identities=19% Similarity=0.213 Sum_probs=148.9
Q ss_pred cccccccCCCCCCcccccccc---cCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 33 THGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~---~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
...+|++++..++ .+.+... ...|++|||+.+ +|.+++.... ..+++..++.++.||+.||.|||+.||+|+||
T Consensus 56 ~~~~h~~i~~~~~-~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l 133 (287)
T cd07838 56 ESFEHPNIVRLLD-VCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDL 133 (287)
T ss_pred hccCCCCcceEEE-EEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence 3346888877766 4433221 248999999975 8999885432 36899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.+|++|||.+........
T Consensus 134 ~~~nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 162 (287)
T cd07838 134 KPQNILVTSDGQVKIADFGLARIYSFEMA--------------------------------------------------- 162 (287)
T ss_pred ChhhEEEccCCCEEEeccCcceeccCCcc---------------------------------------------------
Confidence 99999999999999999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.....++..|+|||.+.+..++.++|||||||++|||++
T Consensus 163 ----------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~ 202 (287)
T cd07838 163 ----------------------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRR 202 (287)
T ss_pred ----------------------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhC
Confidence 011246888999999999889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcc-----------------cCC----C----chhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 268 --PFSTGEEKTRTMSSLRH-----------------RVL----P----PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~-----------------~~~----~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
||............... ... + .......+.+.++|.+||..||.+||++.+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 203 RPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred CCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 55433222211111110 000 0 01122346678999999999999999999999
Q ss_pred hcccc
Q 002801 321 QSEFL 325 (879)
Q Consensus 321 ~hp~~ 325 (879)
+||||
T Consensus 283 ~~~~~ 287 (287)
T cd07838 283 QHPYF 287 (287)
T ss_pred cCcCC
Confidence 99997
No 422
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.94 E-value=1.5e-26 Score=247.01 Aligned_cols=200 Identities=12% Similarity=0.142 Sum_probs=153.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+..|++++..++ .+.+ ...+|++|||+.+++|.+++......+++.+++.++.|++.||+|||+.||+||||||
T Consensus 59 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp 135 (268)
T cd05063 59 IMGQFSHHNIIRLEG-VVTK--FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAA 135 (268)
T ss_pred HHhcCCCCCeeEEEE-EEcc--CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccch
Confidence 345567787777665 4433 3468999999999999999976556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++..........
T Consensus 136 ~Nili~~~~~~kl~dfg~~~~~~~~~~~~--------------------------------------------------- 164 (268)
T cd05063 136 RNILVNSNLECKVSDFGLSRVLEDDPEGT--------------------------------------------------- 164 (268)
T ss_pred hhEEEcCCCcEEECCCccceecccccccc---------------------------------------------------
Confidence 99999999999999999986532110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
+ .......+..|+|||++.+..++.++|||||||++|||++
T Consensus 165 ----------------------------------~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~ 208 (268)
T cd05063 165 ----------------------------------Y--TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGE 208 (268)
T ss_pred ----------------------------------e--eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCC
Confidence 0 0000122456999999988889999999999999999886
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+......+.....+..+.+++.+||..+|++||++.++++
T Consensus 209 ~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 209 RPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 7754333 3344444444344444556788899999999999999999999975
No 423
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.94 E-value=1e-27 Score=268.05 Aligned_cols=200 Identities=16% Similarity=0.232 Sum_probs=151.1
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCC--CC-ChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKR--SV-DVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~--~l-~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.-.|+|+|.+|| .+......||..|+| ..+|.++++.... .. ...+.+.++.|++.||++||+.+||||||||
T Consensus 559 SD~H~NviRyyc---~E~d~qF~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkP 634 (903)
T KOG1027|consen 559 SDEHPNVIRYYC---SEQDRQFLYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKP 634 (903)
T ss_pred ccCCCceEEEEe---eccCCceEEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCC
Confidence 458999999887 333455789999999 6799999966311 11 1145688999999999999999999999999
Q ss_pred cceeecc---C--CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 111 SCFVMSS---F--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 111 ~NIll~~---~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
.||||+. . ..++|.|||+|+.+......
T Consensus 635 QNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS----------------------------------------------- 667 (903)
T KOG1027|consen 635 QNILISVPSADGTLRAKISDFGLSKKLAGGKSS----------------------------------------------- 667 (903)
T ss_pred ceEEEEccCCCcceeEEecccccccccCCCcch-----------------------------------------------
Confidence 9999975 2 36899999999886433110
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
+. +.....||..|+|||++....-+.++||+||||++|+.
T Consensus 668 ---------------------------------------~~-r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYv 707 (903)
T KOG1027|consen 668 ---------------------------------------FS-RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYV 707 (903)
T ss_pred ---------------------------------------hh-cccCCCCcccccCHHHHhccccCcccchhhcCceEEEE
Confidence 00 11335789999999999999888899999999999999
Q ss_pred hc----CCCCChhhHhHHhhhcccCCCchhhccCh--hhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
++ ||........ .+..+...-......+ .+.+||.+|++++|..||+|.+||.||||-.
T Consensus 708 ltgG~HpFGd~~~R~~---NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 708 LTGGSHPFGDSLERQA---NILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred ecCCccCCCchHHhhh---hhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence 99 8865443322 2222211111111112 7889999999999999999999999999975
No 424
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.94 E-value=1.7e-26 Score=250.58 Aligned_cols=200 Identities=18% Similarity=0.214 Sum_probs=151.2
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCCCcce
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCF 113 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlKP~NI 113 (879)
..|++++..++ .|.+ ....|++|||+. ++|..++......+++..+..++.||+.||.|||+ .||+||||||+||
T Consensus 71 ~~~~~i~~~~~-~~~~--~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~ni 146 (296)
T cd06618 71 HDCPYIVKCYG-YFIT--DSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNI 146 (296)
T ss_pred cCCCchHhhhe-eeec--CCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHE
Confidence 35788887776 5543 346899999984 57777775544578999999999999999999997 5999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
+++.++.+||+|||++.......
T Consensus 147 ll~~~~~~kL~dfg~~~~~~~~~--------------------------------------------------------- 169 (296)
T cd06618 147 LLDASGNVKLCDFGISGRLVDSK--------------------------------------------------------- 169 (296)
T ss_pred EEcCCCCEEECccccchhccCCC---------------------------------------------------------
Confidence 99999999999999986531110
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC----CCccCcchhHHHHHHHhhc--
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+.. ++.++|||||||++|||++
T Consensus 170 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 215 (296)
T cd06618 170 ----------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215 (296)
T ss_pred ----------------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCC
Confidence 001124677899999987553 8899999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
||..................+ +........+.+|+.+||..||.+||++.++++||||....
T Consensus 216 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 216 FPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred CCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 775533322222222222111 12223567789999999999999999999999999998644
No 425
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=1.6e-26 Score=255.31 Aligned_cols=195 Identities=16% Similarity=0.142 Sum_probs=149.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------CCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ .|.+ ....|++|||+.+++|.++|.+. ...+++.+++.++.||+.||+|||+
T Consensus 76 ~h~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~ 152 (334)
T cd05100 76 KHKNIINLLG-ACTQ--DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS 152 (334)
T ss_pred CCCCeeeeeE-EEcc--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 6788877666 5543 33679999999999999998542 1247888999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+|||++.++.+||+|||+++.........
T Consensus 153 ~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------------- 191 (334)
T cd05100 153 QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYK----------------------------------------- 191 (334)
T ss_pred CCeeccccccceEEEcCCCcEEECCcccceecccccccc-----------------------------------------
Confidence 999999999999999999999999999986532110000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||++.+..++.++|||||||
T Consensus 192 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 224 (334)
T cd05100 192 -----------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 224 (334)
T ss_pred -----------------------------------------------cccCCCcCceEcCHHHhccCCcCchhhhHHHHH
Confidence 001113356799999999988999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+||||++ ||... ........+.....++.....+..+.+++.+||+.+|.+||++.+++++
T Consensus 225 il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 225 LLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 9999986 56433 3333333333333334444566788999999999999999999999763
No 426
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.94 E-value=1.3e-26 Score=245.87 Aligned_cols=198 Identities=14% Similarity=0.141 Sum_probs=151.1
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+.+ ....|++|||+.+++|.+++......+++..++.++.|++.||+|||+.||+|+||||+
T Consensus 53 l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ 129 (256)
T cd05112 53 MMKLSHPKLVQLYG-VCTE--RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAAR 129 (256)
T ss_pred HHhCCCCCeeeEEE-EEcc--CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccc
Confidence 34457778777666 4433 34679999999999999999665567899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||+++........
T Consensus 130 ni~i~~~~~~~l~d~g~~~~~~~~~~~----------------------------------------------------- 156 (256)
T cd05112 130 NCLVGENQVVKVSDFGMTRFVLDDQYT----------------------------------------------------- 156 (256)
T ss_pred eEEEcCCCeEEECCCcceeecccCccc-----------------------------------------------------
Confidence 999999999999999998653211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ------------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~ 200 (256)
T cd05112 157 ------------------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKT 200 (256)
T ss_pred ------------------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCC
Confidence 0001134567999999988889999999999999999997
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||..... ......+.....+......+..+.+|+.+||..+|++||++.++++.
T Consensus 201 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 201 PYENRSN-SEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCCcCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 6644332 23333333322222222345778899999999999999999999863
No 427
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=9e-25 Score=217.52 Aligned_cols=242 Identities=17% Similarity=0.309 Sum_probs=205.0
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCC-CCCeEEEeeCCCcE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQIASSNFEGVV 642 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~l~s~~~dg~V 642 (879)
+..|.+.|++++.+ |.++|+||.|-+|+|||+....... ....|.+.|+++.|.+. ..++|++|+.||.|
T Consensus 39 ~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg-------~ll~HagsitaL~F~~~~S~shLlS~sdDG~i 109 (362)
T KOG0294|consen 39 FSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLG-------ILLSHAGSITALKFYPPLSKSHLLSGSDDGHI 109 (362)
T ss_pred ccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhc-------ceeccccceEEEEecCCcchhheeeecCCCcE
Confidence 45799999999996 8899999999999999998632211 22458899999999763 24599999999999
Q ss_pred EEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEe
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs 722 (879)
.+|+.....++..++.|.+.|+.++.+| .+++.++.+.|+.+++||+-.|+.-.....+...+.|.|+|. |.+++.++
T Consensus 110 ~iw~~~~W~~~~slK~H~~~Vt~lsiHP-S~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~-Gd~F~v~~ 187 (362)
T KOG0294|consen 110 IIWRVGSWELLKSLKAHKGQVTDLSIHP-SGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQ-GDHFVVSG 187 (362)
T ss_pred EEEEcCCeEEeeeecccccccceeEecC-CCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCC-CCEEEEEe
Confidence 9999999999999999999999999999 999999999999999999999987776666666677999999 77777766
Q ss_pred CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEE-
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGL- 801 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~- 801 (879)
.+ .|-+|.+.+... .........+.++.|.++.+|++|..|+.|++||..+. .+...+.+|.+.|-.+.+
T Consensus 188 ~~-~i~i~q~d~A~v--~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~------~~~~~~~AH~~RVK~i~~~ 258 (362)
T KOG0294|consen 188 RN-KIDIYQLDNASV--FREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSD------TPLTEFLAHENRVKDIASY 258 (362)
T ss_pred cc-EEEEEecccHhH--hhhhhccccceeeeecCCceEEEecCCceEEEeccCCC------ccceeeecchhheeeeEEE
Confidence 54 588999887762 22222336688999999999999999999999999985 789999999999998874
Q ss_pred -ecCCCEEEEEeCCCcEEEEecCCC
Q 002801 802 -SVWDGYVATGSETNEVFVYHKAFP 825 (879)
Q Consensus 802 -sp~~~~lasgs~Dg~v~vw~~~~~ 825 (879)
.|++.||+|+|.||.|+|||++..
T Consensus 259 ~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 259 TNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred ecCCceEEEEeccCceEEEEEcccc
Confidence 455779999999999999999865
No 428
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=4.8e-27 Score=227.85 Aligned_cols=192 Identities=15% Similarity=0.215 Sum_probs=150.3
Q ss_pred cCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCC
Q 002801 54 IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (879)
Q Consensus 54 ~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~ 133 (879)
..+|+|+.+| ..+|.-+|.....+++..++..++.+++.||.|+|...|+|||+||+|+||+.+|.+||+|||+++.+.
T Consensus 97 ~t~ylVf~~c-ehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 97 ATFYLVFDFC-EHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred ceeeeeHHHh-hhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 3589999999 458999997766789999999999999999999999999999999999999999999999999997753
Q ss_pred CCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeecccccccccccccc
Q 002801 134 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 213 (879)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (879)
...-.
T Consensus 176 ~~~n~--------------------------------------------------------------------------- 180 (376)
T KOG0669|consen 176 TSKNV--------------------------------------------------------------------------- 180 (376)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 22110
Q ss_pred chhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--CCCCChhhHhHHhh---hcccCC
Q 002801 214 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSS---LRHRVL 287 (879)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~---~~~~~~ 287 (879)
.+.+.+..+-|.||++||.+.|.. |+++.|||..|||+.||.+ |...+......... +....-
T Consensus 181 -----------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 181 -----------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred -----------CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 000224457799999999999866 9999999999999999999 77665544433322 222211
Q ss_pred Cchh-------------------------------hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCch
Q 002801 288 PPQL-------------------------------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 288 ~~~~-------------------------------~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~ 332 (879)
+..| ....+.+.+|+.++|..||.+||.+.+++.|.||..-..+.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~pq 325 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMPQ 325 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcch
Confidence 1110 01123578999999999999999999999999998755553
No 429
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.94 E-value=8.1e-27 Score=247.98 Aligned_cols=200 Identities=18% Similarity=0.186 Sum_probs=155.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+.+.+|++++..++ .+.+ ....+++|||+.+++|..++. .....+++.+++.++.|++.||.|||++||+|+|
T Consensus 55 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~ 131 (260)
T cd08222 55 LLSKLDHPAIVKFHA-SFLE--RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRD 131 (260)
T ss_pred HHHhCCCCcHHHHHH-HHhc--CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccC
Confidence 445667888887776 3433 335799999999999998884 2345789999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++. +.++++|||+++.......
T Consensus 132 l~~~nili~~-~~~~l~d~g~~~~~~~~~~-------------------------------------------------- 160 (260)
T cd08222 132 LKAKNIFLKN-NLLKIGDFGVSRLLMGSCD-------------------------------------------------- 160 (260)
T ss_pred CChhheEeec-CCEeecccCceeecCCCcc--------------------------------------------------
Confidence 9999999974 6799999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......|++.|+|||.+.+..++.++|+||||+++|+|++
T Consensus 161 ----------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~ 200 (260)
T cd08222 161 ----------------------------------------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC 200 (260)
T ss_pred ----------------------------------------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence 0011356888999999988889999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..... ......+.....+......+..+.+++.+||..+|++||++.++++||||
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 201 LAHAFEGQNF-LSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred CCCCCCCccH-HHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 6644333 23333333333444444566788999999999999999999999999997
No 430
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.94 E-value=1.5e-26 Score=244.69 Aligned_cols=199 Identities=18% Similarity=0.226 Sum_probs=157.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+.+..|++++..+. .+.+ ....|++|||+++++|.+++... ..+++..+..++.|++.||.|||+.||+|+||||+
T Consensus 53 l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ 128 (254)
T cd06627 53 LKNLKHPNIVKYIG-SIET--SDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAA 128 (254)
T ss_pred HHhCCCCCccEEEE-EEEe--CCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHH
Confidence 34456777666555 3333 35689999999999999999655 57899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++|+|||.+.........
T Consensus 129 ni~i~~~~~~~l~d~~~~~~~~~~~~~----------------------------------------------------- 155 (254)
T cd06627 129 NILTTKDGVVKLADFGVATKLNDVSKD----------------------------------------------------- 155 (254)
T ss_pred HEEECCCCCEEEeccccceecCCCccc-----------------------------------------------------
Confidence 999999999999999998664211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....|+..|+|||.+.+..++.++||||||+++|+|++ |
T Consensus 156 -------------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p 198 (254)
T cd06627 156 -------------------------------------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPP 198 (254)
T ss_pred -------------------------------------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCC
Confidence 011356888999999988889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
|........ +........++......+.+.+++.+||..+|++||++.+++.||||
T Consensus 199 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 199 YYDLNPMAA-LFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred CCCccHHHH-HHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 755443222 22222333344444566788999999999999999999999999997
No 431
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.94 E-value=1.9e-26 Score=246.44 Aligned_cols=201 Identities=13% Similarity=0.147 Sum_probs=152.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|+|++..++ .+. .....|++|||+++++|.++++...+.+++.+++.++.|++.||+|||++||+|+||||+
T Consensus 59 l~~l~h~ni~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~ 135 (269)
T cd05065 59 MGQFDHPNIIHLEG-VVT--KSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAAR 135 (269)
T ss_pred HHhCCCcCcceEEE-EEC--CCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChh
Confidence 44567888877666 443 234579999999999999999766567899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||+++...........
T Consensus 136 nili~~~~~~kl~dfg~~~~~~~~~~~~~~-------------------------------------------------- 165 (269)
T cd05065 136 NILVNSNLVCKVSDFGLSRFLEDDTSDPTY-------------------------------------------------- 165 (269)
T ss_pred eEEEcCCCcEEECCCccccccccCcccccc--------------------------------------------------
Confidence 999999999999999998653211000000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---- 267 (879)
. .......+..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 ----------------------------------~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~ 210 (269)
T cd05065 166 ----------------------------------T-SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 210 (269)
T ss_pred ----------------------------------c-cccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCC
Confidence 0 0000112457999999998889999999999999999875
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... .....+......+.....++.+.+++.+||..+|.+||++.+++.
T Consensus 211 p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 211 PYWDMSNQ-DVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred CCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 77544333 222233333333334456678899999999999999999999975
No 432
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.94 E-value=1.2e-26 Score=251.62 Aligned_cols=200 Identities=16% Similarity=0.133 Sum_probs=148.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-----------CCCChhHHHHHHHHHHHHHHhhh
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-----------RSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-----------~~l~~~~~~~i~~qi~~~l~~lH 99 (879)
.+...+|++++..++ .+.. ....|++|||+.+++|.+++.... ..+++..++.++.||+.||.|||
T Consensus 70 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 146 (295)
T cd05097 70 IMSRLKNPNIIRLLG-VCVS--DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA 146 (295)
T ss_pred HHHhCCCCCcCeEEE-EEcC--CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence 345567888877776 4432 346899999999999999984321 23688899999999999999999
Q ss_pred hcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCc
Q 002801 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (879)
Q Consensus 100 s~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (879)
++||+||||||+||+++.++.+|++|||++.........
T Consensus 147 ~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------- 185 (295)
T cd05097 147 SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY----------------------------------------- 185 (295)
T ss_pred hcCeeccccChhhEEEcCCCcEEecccccccccccCcce-----------------------------------------
Confidence 999999999999999999999999999998653111000
Q ss_pred ccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHH
Q 002801 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (879)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (879)
.......++..|+|||++.+..++.++||||||
T Consensus 186 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG 218 (295)
T cd05097 186 -----------------------------------------------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFG 218 (295)
T ss_pred -----------------------------------------------eccCcCcCceeecChhhhccCCcCchhhHHHHH
Confidence 000112456789999999888899999999999
Q ss_pred HHHHHhhc-----CCCCChhhHhHHhh---hc---ccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 260 VLLFELFC-----PFSTGEEKTRTMSS---LR---HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 260 vil~ell~-----pf~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|++|||++ ||............ .. ...........++.+.+|+.+||..+|.+||++.+|++
T Consensus 219 ~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 219 VTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99999987 66443322211111 01 11112223345678999999999999999999999965
No 433
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.94 E-value=1.2e-26 Score=249.87 Aligned_cols=200 Identities=19% Similarity=0.226 Sum_probs=150.1
Q ss_pred eecccc-cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 31 ELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 31 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
.+.... |++++..++ .+.+ ....|++|||+ +++|.+++.... ..+++.+++.++.||+.+|.|||++||+|+||
T Consensus 50 ~l~~~~~h~~i~~~~~-~~~~--~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl 125 (283)
T cd07830 50 SLRKLNEHPNIVKLKE-VFRE--NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDL 125 (283)
T ss_pred HHHhccCCCCchhHHH-Hhhc--CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 344445 788777666 4544 55789999999 889999885543 47899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||+++......
T Consensus 126 ~~~ni~i~~~~~~~l~d~~~~~~~~~~~---------------------------------------------------- 153 (283)
T cd07830 126 KPENLLVSGPEVVKIADFGLAREIRSRP---------------------------------------------------- 153 (283)
T ss_pred ChhhEEEcCCCCEEEeecccceeccCCC----------------------------------------------------
Confidence 9999999999999999999986531110
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~ 267 (879)
......|+..|+|||++.+ ..++.++|||||||++|||++
T Consensus 154 ---------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~ 194 (283)
T cd07830 154 ---------------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYT 194 (283)
T ss_pred ---------------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHh
Confidence 0012367889999998865 448999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhc--c------------------cCC--------CchhhccChhhHHHHHHhcCCCCCCCCCH
Q 002801 268 ---PFSTGEEKTRTMSSLR--H------------------RVL--------PPQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~--~------------------~~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
||.............. . ... ........+.+.++|.+||..+|++|||+
T Consensus 195 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~ 274 (283)
T cd07830 195 LRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTA 274 (283)
T ss_pred CCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCH
Confidence 5543322221111100 0 000 01111234678899999999999999999
Q ss_pred HHHhhcccc
Q 002801 317 GELLQSEFL 325 (879)
Q Consensus 317 ~evl~hp~~ 325 (879)
.|++.||||
T Consensus 275 ~ei~~~~~~ 283 (283)
T cd07830 275 SQALQHPYF 283 (283)
T ss_pred HHHhhCCCC
Confidence 999999997
No 434
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.94 E-value=1.4e-26 Score=246.08 Aligned_cols=197 Identities=13% Similarity=0.116 Sum_probs=151.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ +.. ....|++|||+.+++|.+++.. ....+++.+++.++.||+.||+|||+.||+|||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~ 129 (260)
T cd05067 54 LMKQLQHPRLVRLYA-VVT---QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLR 129 (260)
T ss_pred HHHhcCCcCeeeEEE-EEc---cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeeccccc
Confidence 344557888877666 332 2358999999999999999854 33568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++.........
T Consensus 130 p~ni~i~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------- 158 (260)
T cd05067 130 AANILVSETLCCKIADFGLARLIEDNEYT--------------------------------------------------- 158 (260)
T ss_pred HHhEEEcCCCCEEEccCcceeecCCCCcc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g 200 (260)
T cd05067 159 --------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYG 200 (260)
T ss_pred --------------------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCC
Confidence 0011244677999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+.....++.....+..+.+++.+||..+|++||++++++.
T Consensus 201 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 201 RIPYPGMT-NPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred CCCCCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 664433 23333333333333444455678999999999999999999999875
No 435
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.94 E-value=1.8e-26 Score=249.53 Aligned_cols=199 Identities=15% Similarity=0.129 Sum_probs=152.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-----------------------CCCCChhHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----------------------KRSVDVYECLHI 87 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-----------------------~~~l~~~~~~~i 87 (879)
.+...+|++++..++ .|.. ....|++|||+.+++|.+++... ...+++..++.+
T Consensus 56 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 132 (290)
T cd05045 56 LLKQVNHPHVIKLYG-ACSQ--DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISF 132 (290)
T ss_pred HHhhCCCCCEeeEEE-EEec--CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHH
Confidence 345567888887666 4433 34589999999999999987431 135788999999
Q ss_pred HHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcc
Q 002801 88 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 167 (879)
Q Consensus 88 ~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (879)
+.||+.||.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 133 ~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~----------------------------- 183 (290)
T cd05045 133 AWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY----------------------------- 183 (290)
T ss_pred HHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccch-----------------------------
Confidence 999999999999999999999999999999999999999998653111000
Q ss_pred ccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC
Q 002801 168 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 247 (879)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 247 (879)
.......++..|+|||.+.+.
T Consensus 184 -----------------------------------------------------------~~~~~~~~~~~y~apE~~~~~ 204 (290)
T cd05045 184 -----------------------------------------------------------VKRSKGRIPVKWMAIESLFDH 204 (290)
T ss_pred -----------------------------------------------------------hcccCCCCCccccCHHHHccC
Confidence 000112446679999999888
Q ss_pred CCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 248 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 248 ~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
.++.++|||||||++|||++ ||... ........+.....++.....+..+.+++.+||+.+|.+||++.++++
T Consensus 205 ~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 205 IYTTQSDVWSFGVLLWEIVTLGGNPYPGI-APERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CcchHhHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 89999999999999999997 66433 333334444443333444556678999999999999999999999975
No 436
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.94 E-value=1.2e-26 Score=257.42 Aligned_cols=206 Identities=17% Similarity=0.227 Sum_probs=152.4
Q ss_pred eecccccccCCCCCCcccccc----cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
.+.+.+|++++..++ ++... .....|++++++ |++|.++++.. .+++..++.++.||+.||+|||++||+||
T Consensus 69 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~ 144 (345)
T cd07877 69 LLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHR 144 (345)
T ss_pred HHHHcCCCcccceee-eeeecccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 445567888877666 44321 123467788776 88999988543 58999999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||||+||+++.++.+|++|||+++.....
T Consensus 145 dlkp~NIll~~~~~~kl~dfg~~~~~~~~--------------------------------------------------- 173 (345)
T cd07877 145 DLKPSNLAVNEDCELKILDFGLARHTDDE--------------------------------------------------- 173 (345)
T ss_pred CCChHHEEEcCCCCEEEeccccccccccc---------------------------------------------------
Confidence 99999999999999999999998642110
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~el 265 (879)
.....|+.+|+|||.+.+ ..++.++|||||||++|||
T Consensus 174 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el 211 (345)
T cd07877 174 ------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 211 (345)
T ss_pred ------------------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHH
Confidence 012367889999999876 4589999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhc--cc----------------------CCC-----chhhccChhhHHHHHHhcCCCCCCC
Q 002801 266 FC---PFSTGEEKTRTMSSLR--HR----------------------VLP-----PQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~~----------------------~~~-----~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
++ ||............+. .. ..+ ......++.+.+||.+||++||.+|
T Consensus 212 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 291 (345)
T cd07877 212 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 291 (345)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhc
Confidence 98 6643322111111100 00 000 0112345678899999999999999
Q ss_pred CCHHHHhhcccccCCcCchH
Q 002801 314 PKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 314 pt~~evl~hp~~~~~~~~~~ 333 (879)
|++.+++.||||.....+..
T Consensus 292 ~t~~e~l~h~~f~~~~~~~~ 311 (345)
T cd07877 292 ITAAQALAHAYFAQYHDPDD 311 (345)
T ss_pred CCHHHHhcChhhhhcCCCCc
Confidence 99999999999987554443
No 437
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.94 E-value=1.2e-26 Score=260.66 Aligned_cols=157 Identities=13% Similarity=0.138 Sum_probs=121.8
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcc
Q 002801 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (879)
Q Consensus 78 ~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (879)
.+++..++.|+.||+.||+|||++||+||||||+|||++..+.+|++|||+++........
T Consensus 235 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~------------------- 295 (401)
T cd05107 235 ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY------------------- 295 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccccc-------------------
Confidence 3567788999999999999999999999999999999999999999999998653111000
Q ss_pred hhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccc
Q 002801 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (879)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (879)
.......++..
T Consensus 296 ---------------------------------------------------------------------~~~~~~~~~~~ 306 (401)
T cd05107 296 ---------------------------------------------------------------------ISKGSTFLPLK 306 (401)
T ss_pred ---------------------------------------------------------------------ccCCCcCCCCc
Confidence 00011256788
Q ss_pred eeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCC
Q 002801 238 YASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
|+|||.+.+..++.++|||||||+||||++ ||............+.....++.+...+..+.+|+.+||..+|.+|
T Consensus 307 y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~R 386 (401)
T cd05107 307 WMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIR 386 (401)
T ss_pred eeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHC
Confidence 999999988889999999999999999996 6654433333333333333333444567889999999999999999
Q ss_pred CCHHHHhhc
Q 002801 314 PKMGELLQS 322 (879)
Q Consensus 314 pt~~evl~h 322 (879)
|++.++++.
T Consensus 387 Ps~~ell~~ 395 (401)
T cd05107 387 PDFSQLVHL 395 (401)
T ss_pred cCHHHHHHH
Confidence 999999863
No 438
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.94 E-value=1.2e-26 Score=250.76 Aligned_cols=200 Identities=15% Similarity=0.088 Sum_probs=152.4
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------------CCCCChhHHHHHH
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------------KRSVDVYECLHIF 88 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------------~~~l~~~~~~~i~ 88 (879)
..+...+|++++..++ +|.+ ....|++|||+.+++|.+++... ...+++.+++.++
T Consensus 60 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (288)
T cd05050 60 ALMAEFDHPNIVKLLG-VCAV--GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIA 136 (288)
T ss_pred HHHHhcCCCchheEEE-EEcC--CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHH
Confidence 3455667888887766 5544 34679999999999999998532 1247888999999
Q ss_pred HHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccc
Q 002801 89 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 168 (879)
Q Consensus 89 ~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (879)
.||+.||+|||++||+||||||+||+++.++.++++|||+++.........
T Consensus 137 ~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~----------------------------- 187 (288)
T cd05050 137 KQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK----------------------------- 187 (288)
T ss_pred HHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcccc-----------------------------
Confidence 999999999999999999999999999999999999999986532110000
Q ss_pred cccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC
Q 002801 169 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 248 (879)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 248 (879)
.......+..|+|||.+.+..
T Consensus 188 -----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 208 (288)
T cd05050 188 -----------------------------------------------------------ASENDAIPIRWMPPESIFYNR 208 (288)
T ss_pred -----------------------------------------------------------ccCCCccChhhcCHHHHhcCC
Confidence 000113356699999998888
Q ss_pred CCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 249 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 249 ~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++.++|||||||++|||++ ||...... .....+.....++.....+..+.+|+.+||..+|.+|||+.|+++
T Consensus 209 ~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 209 YTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 9999999999999999986 66544332 333334444333334456678999999999999999999999875
No 439
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=1e-23 Score=199.92 Aligned_cols=293 Identities=17% Similarity=0.272 Sum_probs=230.2
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCc---Cccccc-ceE----EeccCCCeeEEEEeCCCCCeEEEee
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE---NRDIHY-PVV----EMASRSKLSSICWNSYIKSQIASSN 637 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~---~~~~~~-~~~----~~~~~~~i~~l~~~~~~~~~l~s~~ 637 (879)
..+..|.+++|+|.|.+.|.|+..++++|-.+...... .....+ |.+ ...|++.|.|.+|+|. +++|++|+
T Consensus 30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~-geliatgs 108 (350)
T KOG0641|consen 30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC-GELIATGS 108 (350)
T ss_pred cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc-cCeEEecC
Confidence 44678999999999999999999999999877653322 111112 222 2358899999999995 99999999
Q ss_pred CCCcEEEEEcCCCeE-----EEEeccCCCcEEEEEEec---CCCCEEEEEe-CCCcEEEEeCCCCceEEEEecCC-ceEE
Q 002801 638 FEGVVQVWDVSRSQV-----LTEMREHERRVWSIDFSS---ADPTLLASGS-DDGSVKLWSINQGVSIGTIKTKA-NVCC 707 (879)
Q Consensus 638 ~dg~V~vwd~~~~~~-----~~~~~~h~~~v~sv~~sp---~~~~~lasgs-~Dg~V~iwd~~~~~~i~~~~~~~-~v~~ 707 (879)
.|.+|++.-.+...+ -.++.-|.+.|..++|-. ..+.+|++++ .|+.|++-|...|+...-+..+. .|.+
T Consensus 109 ndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghila 188 (350)
T KOG0641|consen 109 NDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILA 188 (350)
T ss_pred CCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEE
Confidence 999999986654322 245677999999999964 1245677754 57889999999999988887554 4544
Q ss_pred EEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEcc--C-----CCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcc
Q 002801 708 VQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG--H-----NKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTS 779 (879)
Q Consensus 708 v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~--h-----~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~ 779 (879)
+ ++ +++..+++|+.|.+|++||+|-... +.++.. | .++|.+|+.. .|.+|++|-.|....+||++.+
T Consensus 189 l-ys-wn~~m~~sgsqdktirfwdlrv~~~-v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~-- 263 (350)
T KOG0641|consen 189 L-YS-WNGAMFASGSQDKTIRFWDLRVNSC-VNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG-- 263 (350)
T ss_pred E-EE-ecCcEEEccCCCceEEEEeeeccce-eeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCC--
Confidence 4 22 2378999999999999999998763 655532 2 3679999998 9999999999999999999987
Q ss_pred cccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCC
Q 002801 780 RVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQ 859 (879)
Q Consensus 780 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~ 859 (879)
++++.|-.|+..|.+|.|||...|+.+||.|..|++-|+...- ...+ +......|...+-.+.|+|+
T Consensus 264 ----r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdl-a~el--------~~~vv~ehkdk~i~~rwh~~ 330 (350)
T KOG0641|consen 264 ----RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDL-AHEL--------PIMVVAEHKDKAIQCRWHPQ 330 (350)
T ss_pred ----ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccch-hhcC--------ceEEEEeccCceEEEEecCc
Confidence 8899999999999999999999999999999999999986421 1000 01112568888999999999
Q ss_pred CCcEEEEEeCCCcEEEEEe
Q 002801 860 SSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 860 ~~~~l~s~~~Dg~I~vw~l 878 (879)
.- .+++.+.|.++.+|-+
T Consensus 331 d~-sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 331 DF-SFISSSADKTATLWAL 348 (350)
T ss_pred cc-eeeeccCcceEEEecc
Confidence 87 8999999999999965
No 440
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94 E-value=1.3e-26 Score=247.79 Aligned_cols=199 Identities=13% Similarity=0.117 Sum_probs=144.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC----CCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK----RSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~----~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
.+...+|+|++..++ .|.+ ....|++|||+.+++|.++|.... ...++..++.++.||+.||+|||++||+||
T Consensus 48 ~~~~l~h~nii~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 124 (269)
T cd05042 48 PYRELNHPNVLQCLG-QCIE--SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHS 124 (269)
T ss_pred HHHhCCCCCcceEEE-EECC--CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecc
Confidence 344567888888776 5543 346899999999999999995432 234677889999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||||+|||++.++.+|++|||+++........
T Consensus 125 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------------ 156 (269)
T cd05042 125 DLALRNCQLTADLSVKIGDYGLALEQYPEDYY------------------------------------------------ 156 (269)
T ss_pred cccHhheEecCCCcEEEeccccccccccchhe------------------------------------------------
Confidence 99999999999999999999998652111000
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-------CCCCccCcchhHH
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDIYRLG 259 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~~~~sDIwSlG 259 (879)
.......++..|+|||++.. ..++.++||||||
T Consensus 157 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05042 157 ----------------------------------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLG 196 (269)
T ss_pred ----------------------------------------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHH
Confidence 00011245677999998743 3478899999999
Q ss_pred HHHHHhhc----CCCCChhhHhHHhhhcccCC----CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVL----PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 260 vil~ell~----pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|++|||++ ||............+..... +......++....++..|+ .||++|||+++|++
T Consensus 197 ~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 197 VTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 99999997 56544433333332322211 1122234566778888888 59999999999875
No 441
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.94 E-value=1.8e-24 Score=236.58 Aligned_cols=264 Identities=17% Similarity=0.239 Sum_probs=227.6
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
+.+...+.+++|+.+++++.+++.. +.+.+..|-|.++++++|...|.+.+||+.+...-... ..|
T Consensus 388 ~~Sga~~SikiWn~~t~kciRTi~~-------~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti-------~AH 453 (888)
T KOG0306|consen 388 LASGAGESIKIWNRDTLKCIRTITC-------GYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETI-------RAH 453 (888)
T ss_pred eeecCCCcEEEEEccCcceeEEecc-------ccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhh-------hcc
Confidence 4445577999999999999998764 37889999999999999999999999999874332211 258
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCC-----Ce--EEEEec-----cCCCcEEEEEEecCCCCEEEEEeCCCc
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR-----SQ--VLTEMR-----EHERRVWSIDFSSADPTLLASGSDDGS 684 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~-----~~--~~~~~~-----~h~~~v~sv~~sp~~~~~lasgs~Dg~ 684 (879)
.+.|++++..|. +..+++|+.|.+|++||..- +. .+..+. +-+..|.|+.+|| |+.+||.+--|.+
T Consensus 454 dgaIWsi~~~pD-~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp-dgk~LaVsLLdnT 531 (888)
T KOG0306|consen 454 DGAIWSISLSPD-NKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP-DGKLLAVSLLDNT 531 (888)
T ss_pred ccceeeeeecCC-CCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC-CCcEEEEEeccCe
Confidence 999999999995 88999999999999999631 11 111111 2356899999999 9999999999999
Q ss_pred EEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEE
Q 002801 685 VKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVS 762 (879)
Q Consensus 685 V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s 762 (879)
|+||-+.+-+-..++. |+-+|.|+..+|+ +++++|||+|.+|++|-+.-+.+ ...+.+|...|.+|.|. ....+.|
T Consensus 532 VkVyflDtlKFflsLYGHkLPV~smDIS~D-SklivTgSADKnVKiWGLdFGDC-HKS~fAHdDSvm~V~F~P~~~~FFt 609 (888)
T KOG0306|consen 532 VKVYFLDTLKFFLSLYGHKLPVLSMDISPD-SKLIVTGSADKNVKIWGLDFGDC-HKSFFAHDDSVMSVQFLPKTHLFFT 609 (888)
T ss_pred EEEEEecceeeeeeecccccceeEEeccCC-cCeEEeccCCCceEEeccccchh-hhhhhcccCceeEEEEcccceeEEE
Confidence 9999999988766665 5678999999999 89999999999999999998884 78888999999999998 7788999
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCC
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF 824 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~ 824 (879)
+|.|+.|+-||-... ..+..+.+|...|++++.+|+|.|++++|.|.+|++|....
T Consensus 610 ~gKD~kvKqWDg~kF------e~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 610 CGKDGKVKQWDGEKF------EEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred ecCcceEEeechhhh------hhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence 999999999999886 78999999999999999999999999999999999998764
No 442
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.93 E-value=1.7e-26 Score=244.96 Aligned_cols=195 Identities=19% Similarity=0.222 Sum_probs=152.4
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCC-CChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~-l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
..+|++++..+. .+.+. ...|++|||+.+++|.+++...... +++..++.++.||+.||+|||+.||+|+||||+|
T Consensus 57 ~l~~~~i~~~~~-~~~~~--~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~n 133 (258)
T smart00219 57 KLDHPNIVKLLG-VCTEE--EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARN 133 (258)
T ss_pred hcCCCchheEEE-EEcCC--CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccce
Confidence 347778877776 44433 4689999999999999999654333 8999999999999999999999999999999999
Q ss_pred eeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccc
Q 002801 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (879)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (879)
|+++.++.++++|||+++........
T Consensus 134 il~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------------ 159 (258)
T smart00219 134 CLVGENLVVKISDFGLSRDLYDDDYY------------------------------------------------------ 159 (258)
T ss_pred EEEccCCeEEEcccCCceeccccccc------------------------------------------------------
Confidence 99999999999999998664211000
Q ss_pred cCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----C
Q 002801 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----P 268 (879)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----p 268 (879)
......+++.|+|||.+.+..++.++|||||||++|||++ |
T Consensus 160 -----------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p 204 (258)
T smart00219 160 -----------------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESP 204 (258)
T ss_pred -----------------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCC
Confidence 0000125778999999988889999999999999999987 5
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|.. .........+.....++.....+..+.+++.+||..+|.+|||+.++++
T Consensus 205 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 205 YPG-MSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred CCC-CCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 533 3333334444444444444456788999999999999999999999976
No 443
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93 E-value=2.3e-26 Score=248.14 Aligned_cols=203 Identities=18% Similarity=0.197 Sum_probs=151.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ ++.+......|++|||+++ +|.+++......+++.+++.++.||+.||+|||++|++|+||||+
T Consensus 52 l~~l~~~~i~~~~~-~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~ 129 (287)
T cd07840 52 LQKLRHPNIVRLKE-IVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGS 129 (287)
T ss_pred HHhccCCCeeehee-eEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHH
Confidence 34445777777666 4544324578999999975 899998665567999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||++.........
T Consensus 130 nil~~~~~~~~l~d~g~~~~~~~~~~~----------------------------------------------------- 156 (287)
T cd07840 130 NILINNDGVLKLADFGLARPYTKRNSA----------------------------------------------------- 156 (287)
T ss_pred HeEEcCCCCEEEccccceeeccCCCcc-----------------------------------------------------
Confidence 999999999999999998654211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc---
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~--- 267 (879)
..+...++..|+|||.+.+. .++.++|||||||++|||++
T Consensus 157 ------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~ 200 (287)
T cd07840 157 ------------------------------------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKP 200 (287)
T ss_pred ------------------------------------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCC
Confidence 00113567889999987754 58999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc--c----------------------CCC----chhhc-cChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 PFSTGEEKTRTMSSLRH--R----------------------VLP----PQLLL-KFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~--~----------------------~~~----~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||............... . ..+ ..... .++.+.+++.+||..+|.+||++.+
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 280 (287)
T cd07840 201 IFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQ 280 (287)
T ss_pred CCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 66544322211111000 0 000 01112 2667889999999999999999999
Q ss_pred Hhhcccc
Q 002801 319 LLQSEFL 325 (879)
Q Consensus 319 vl~hp~~ 325 (879)
+++||||
T Consensus 281 ~l~~~~~ 287 (287)
T cd07840 281 ALQHEYF 287 (287)
T ss_pred HhhCcCC
Confidence 9999997
No 444
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.93 E-value=2.5e-26 Score=245.09 Aligned_cols=198 Identities=20% Similarity=0.228 Sum_probs=153.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+...+|++++..+. .+.+ ....|++|||++|++|.+++.. ....+++..++.++.||+.||.|||+.||+|+|
T Consensus 55 ~l~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d 131 (267)
T cd08224 55 LLKQLDHPNVIKYLA-SFIE--NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRD 131 (267)
T ss_pred HHHhCCCCCeeeeee-eeec--CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 345567777777766 3333 3467999999999999998842 345689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.++++|||+++.......
T Consensus 132 l~p~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------------- 161 (267)
T cd08224 132 IKPANVFITATGVVKLGDLGLGRFFSSKTT-------------------------------------------------- 161 (267)
T ss_pred cChhhEEECCCCcEEEeccceeeeccCCCc--------------------------------------------------
Confidence 999999999999999999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 162 ----------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~ 201 (267)
T cd08224 162 ----------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred ----------------------------------------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHH
Confidence 0011357888999999998889999999999999999999
Q ss_pred ---CCCCChh-hHhHHhhhcccCCCchhh-ccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 ---PFSTGEE-KTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 ---pf~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... .......+.....++.+. ..+..+.++|.+||..+|++||++.++++
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 202 LQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred CCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 7744332 222333444444444433 45567889999999999999999999875
No 445
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.93 E-value=2e-26 Score=247.76 Aligned_cols=201 Identities=14% Similarity=0.097 Sum_probs=154.6
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+...+|++++..++ .|.. ...+++|||+.+++|.+++......+++..+..++.||+.||+|||++||+|||
T Consensus 59 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~d 134 (279)
T cd05057 59 EAYVMASVDHPHVVRLLG-ICLS---SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRD 134 (279)
T ss_pred HHHHHHhCCCCCcceEEE-EEec---CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecc
Confidence 333455567888877776 5554 578999999999999999977666799999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.+|++|||+++........ .
T Consensus 135 i~p~nil~~~~~~~kL~dfg~~~~~~~~~~~--~---------------------------------------------- 166 (279)
T cd05057 135 LAARNVLVKTPQHVKITDFGLAKLLDVDEKE--Y---------------------------------------------- 166 (279)
T ss_pred cCcceEEEcCCCeEEECCCcccccccCcccc--e----------------------------------------------
Confidence 9999999999999999999999764211000 0
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......++..|+|||.+....++.++|||||||++|||++
T Consensus 167 ----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~ 206 (279)
T cd05057 167 ----------------------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMT 206 (279)
T ss_pred ----------------------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhc
Confidence 0000123557999999988889999999999999999986
Q ss_pred ----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 ----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 ----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... .....+......+.+......+.+++.+||..+|.+||++.++++
T Consensus 207 ~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 207 FGAKPYEGIPAV-EIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CCCCCCCCCCHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 66544332 223333333333334445678889999999999999999999864
No 446
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.93 E-value=2.7e-26 Score=244.00 Aligned_cols=197 Identities=12% Similarity=0.105 Sum_probs=152.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+.+ ...|++|||+.+++|.+++.+ ....+++..++.++.||+.||.|||+.||+|+|||
T Consensus 54 ~l~~l~~~~i~~~~~-~~~~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~ 129 (260)
T cd05073 54 VMKTLQHDKLVKLHA-VVTK---EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 129 (260)
T ss_pred HHHhcCCCCcceEEE-EEcC---CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence 345567888877766 3333 467999999999999999954 33467889999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++..+.+|++|||.+.........
T Consensus 130 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--------------------------------------------------- 158 (260)
T cd05073 130 AANILVSASLVCKIADFGLARVIEDNEYT--------------------------------------------------- 158 (260)
T ss_pred cceEEEcCCCcEEECCCcceeeccCCCcc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||++.+..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g 200 (260)
T cd05073 159 --------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 200 (260)
T ss_pred --------------------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcC
Confidence 0011234567999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+......+.....+..+.+++.+||+.+|++||++.+++.
T Consensus 201 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 201 RIPYPGMS-NPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred CCCCCCCC-HHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 665433 23333334444333444556678899999999999999999998864
No 447
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.93 E-value=2e-26 Score=250.77 Aligned_cols=204 Identities=17% Similarity=0.179 Sum_probs=150.4
Q ss_pred eecccccccCCCCCCccccccc--------ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA--------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
.+.+.+|++++..++ ++.++. ....|++|||+++ +|..++......+++.+++.++.||+.||.|||+.|
T Consensus 59 ~~~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 136 (302)
T cd07864 59 ILRQLNHRNIVNLKE-IVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN 136 (302)
T ss_pred HHHhCCCCCeeeeeh-eecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 344567888877666 444332 3368999999976 777777555557899999999999999999999999
Q ss_pred cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccc
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+|+||||+||+++.++.+||+|||++.........
T Consensus 137 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------- 172 (302)
T cd07864 137 FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR-------------------------------------------- 172 (302)
T ss_pred eecCCCCHHHEEECCCCcEEeCcccccccccCCccc--------------------------------------------
Confidence 999999999999999999999999998654211000
Q ss_pred cccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHH
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 261 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvi 261 (879)
......++..|+|||.+.+. .++.++|||||||+
T Consensus 173 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~ 207 (302)
T cd07864 173 ---------------------------------------------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 207 (302)
T ss_pred ---------------------------------------------ccccceeccCccChHHhcCCCCCCchhHHHHHHHH
Confidence 00112457789999988754 47899999999999
Q ss_pred HHHhhc---CCCCChhhHhHHh--hhcccCCC--------------------------chhhccChhhHHHHHHhcCCCC
Q 002801 262 LFELFC---PFSTGEEKTRTMS--SLRHRVLP--------------------------PQLLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 262 l~ell~---pf~~~~~~~~~~~--~~~~~~~~--------------------------~~~~~~~~~~~~li~~~L~~dP 310 (879)
+|||++ ||........... .......+ ..+...++.+.+++.+||..+|
T Consensus 208 ~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 287 (302)
T cd07864 208 LGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDP 287 (302)
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCCh
Confidence 999999 5644332221111 11111000 1122346778899999999999
Q ss_pred CCCCCHHHHhhcccc
Q 002801 311 SGRPKMGELLQSEFL 325 (879)
Q Consensus 311 ~~Rpt~~evl~hp~~ 325 (879)
.+||++.+++.||||
T Consensus 288 ~~Rp~~~~il~~~~~ 302 (302)
T cd07864 288 SKRCTAEEALNSPWL 302 (302)
T ss_pred hhCCCHHHHhcCCCC
Confidence 999999999999997
No 448
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93 E-value=2.8e-26 Score=242.95 Aligned_cols=199 Identities=20% Similarity=0.215 Sum_probs=157.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+...+|++++..++ .+.+ ....|++|||+++++|.+++.+ ....+++..++.++.|++.||+|||+.||+|+|
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~ 128 (256)
T cd08530 52 ILASVNHPNIISYKE-AFLD--GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRD 128 (256)
T ss_pred HHHhCCCCCchhhhh-hhcc--CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 445556777777665 3332 2568999999999999999844 235689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|+|+||+++.++.+|++|||++...... .
T Consensus 129 l~~~ni~~~~~~~~kl~d~g~~~~~~~~-~-------------------------------------------------- 157 (256)
T cd08530 129 LKSANILLVANDLVKIGDLGISKVLKKN-M-------------------------------------------------- 157 (256)
T ss_pred CCcceEEEecCCcEEEeeccchhhhccC-C--------------------------------------------------
Confidence 9999999999999999999998653211 0
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
.....|+..|+|||.+.+..++.++|+||||+++|||++
T Consensus 158 -----------------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~ 196 (256)
T cd08530 158 -----------------------------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMAT 196 (256)
T ss_pred -----------------------------------------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHh
Confidence 011256888999999998889999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..... ............++.....+..+.+++.+||..+|.+||++.++++||++
T Consensus 197 g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 197 FAPPFEARSM-QDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred CCCCCCCCCH-HHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 7754433 22333334444444444667889999999999999999999999999985
No 449
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.93 E-value=3.3e-26 Score=244.27 Aligned_cols=198 Identities=17% Similarity=0.205 Sum_probs=151.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+...+|++++..+. .+.+ ...+|++|||++|++|.++++. ....+++..++.++.||+.||.|||++||+|+|
T Consensus 55 ~l~~~~h~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d 131 (267)
T cd08229 55 LLKQLNHPNVIKYYA-SFIE--DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRD 131 (267)
T ss_pred HHHHccCCchhhhhh-eeEe--CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 445567888877776 3332 3468999999999999998842 234689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.++++|||++........
T Consensus 132 l~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 161 (267)
T cd08229 132 IKPANVFITATGVVKLGDLGLGRFFSSKTT-------------------------------------------------- 161 (267)
T ss_pred CCHHHEEEcCCCCEEECcchhhhccccCCc--------------------------------------------------
Confidence 999999999999999999999865321100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 162 ----------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~ 201 (267)
T cd08229 162 ----------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred ----------------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHh
Confidence 0011367889999999988889999999999999999999
Q ss_pred ---CCCCChhh-HhHHhhhcccCCCchh-hccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 ---PFSTGEEK-TRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 ---pf~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... ......+.....++.. ...++.+.+++.+||..+|.+|||+.+|++
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 202 LQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred CCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 77543322 2222223222223222 245678899999999999999999998875
No 450
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.93 E-value=2.5e-26 Score=246.44 Aligned_cols=199 Identities=18% Similarity=0.178 Sum_probs=151.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC--------CCCChhHHHHHHHHHHHHHHhhhhcC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------RSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
.+....|++++..+. .+.+ ....|++|||+++++|.+++.... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~ 137 (275)
T cd05046 61 MFRKLSHKNVVRLLG-LCRE--AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR 137 (275)
T ss_pred HHHhcCCcceeeeEE-EECC--CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC
Confidence 345567778777666 5543 346799999999999999995432 15899999999999999999999999
Q ss_pred cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccc
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+||||||+||+++..+.++++|||+++........
T Consensus 138 i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~-------------------------------------------- 173 (275)
T cd05046 138 FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY-------------------------------------------- 173 (275)
T ss_pred cccCcCccceEEEeCCCcEEEcccccccccCccccc--------------------------------------------
Confidence 999999999999999999999999998643111000
Q ss_pred cccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHH
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil 262 (879)
......++..|+|||.+.+..++.++|||||||++
T Consensus 174 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 208 (275)
T cd05046 174 ---------------------------------------------KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLM 208 (275)
T ss_pred ---------------------------------------------ccCCceeEEeecChhhhccCCCCchhhHHHHHHHH
Confidence 00112456779999999888899999999999999
Q ss_pred HHhhc----CCCCChhhHhHHhhhcccCC-CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 263 FELFC----PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 263 ~ell~----pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|||++ ||...... ........... .+.....+..+.+++.+||..+|.+||++.+++..
T Consensus 209 ~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 209 WEVFTQGELPFYGLSDE-EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred HHHHhCCCCCccccchH-HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 99996 66443332 22333332221 22233456778899999999999999999999863
No 451
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.3e-27 Score=247.67 Aligned_cols=186 Identities=17% Similarity=0.184 Sum_probs=155.5
Q ss_pred ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCC
Q 002801 53 AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (879)
Q Consensus 53 ~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~ 132 (879)
....||.||-|-||.|...|++. +.|+...++.|+.-+++|++|||++|||.|||||+|.||+..|-+||.|||.|+.+
T Consensus 492 ~kyvYmLmEaClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki 570 (732)
T KOG0614|consen 492 SKYVYMLMEACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKI 570 (732)
T ss_pred chhhhhhHHhhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHh
Confidence 44689999999999999999665 68999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccc
Q 002801 133 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 212 (879)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (879)
+...
T Consensus 571 ~~g~---------------------------------------------------------------------------- 574 (732)
T KOG0614|consen 571 GSGR---------------------------------------------------------------------------- 574 (732)
T ss_pred ccCC----------------------------------------------------------------------------
Confidence 3321
Q ss_pred cchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCc
Q 002801 213 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289 (879)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~ 289 (879)
+.-.+||||.|.|||++....-+.++|+||||+++||||+ ||........+-.++..-....
T Consensus 575 ---------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~ 639 (732)
T KOG0614|consen 575 ---------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE 639 (732)
T ss_pred ---------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh
Confidence 2245799999999999999999999999999999999999 7765555444444444332222
Q ss_pred hhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCcC
Q 002801 290 QLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (879)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~~ 330 (879)
.+......+.+||.+++..+|.+|.. +.+|..|-||.+...
T Consensus 640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 640 FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 33344566789999999999999966 799999999987654
No 452
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.93 E-value=3.6e-26 Score=244.25 Aligned_cols=199 Identities=14% Similarity=0.123 Sum_probs=150.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC------CCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK------PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~------~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
.+...+|++++..++ +|.+ ....|++|||++|++|.+++.+ ....+++.+++.++.||+.||.|||++||+
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~ 128 (269)
T cd05044 52 LMSNFNHPNIVKLLG-VCLL--NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFI 128 (269)
T ss_pred HHHhcCCCCeeeEee-eecC--CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 345567888877666 5543 3468999999999999999943 223478899999999999999999999999
Q ss_pred cccCCCcceeeccCC-----CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCc
Q 002801 105 VHNVRPSCFVMSSFN-----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (879)
Q Consensus 105 HrDlKP~NIll~~~~-----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (879)
|+||||+||+++..+ .++++|||+++.........
T Consensus 129 H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~---------------------------------------- 168 (269)
T cd05044 129 HRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYR---------------------------------------- 168 (269)
T ss_pred cCCCChheEEEecCCCCCCcceEECCcccccccccccccc----------------------------------------
Confidence 999999999999877 89999999986532110000
Q ss_pred ccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHH
Q 002801 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (879)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (879)
......++..|+|||.+.+..++.++||||||
T Consensus 169 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 200 (269)
T cd05044 169 ------------------------------------------------KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFG 200 (269)
T ss_pred ------------------------------------------------cCcccCCCccccCHHHHccCCcccchhHHHHH
Confidence 00112446779999999988899999999999
Q ss_pred HHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 260 vil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|++|||++ ||..... ......+.....+......++.+.+++.+||..+|.+||++.++++
T Consensus 201 ~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 201 VLMWEILTLGQQPYPALNN-QEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHHHHHHcCCCCCcccCH-HHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999986 6644333 2233333333233333445677889999999999999999999875
No 453
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.93 E-value=3.4e-26 Score=247.41 Aligned_cols=200 Identities=18% Similarity=0.185 Sum_probs=151.6
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..+. .+. .....|++|||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 63 ~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~ 138 (290)
T cd05613 63 QSPFLVTLHY-AFQ--TDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL 138 (290)
T ss_pred cCCChhceee-Eee--cCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE
Confidence 4666666554 332 234679999999999999999654 468999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+|++|||+++........
T Consensus 139 ~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------------------- 161 (290)
T cd05613 139 DSNGHVVLTDFGLSKEFHEDEVE--------------------------------------------------------- 161 (290)
T ss_pred CCCCCEEEeeCccceeccccccc---------------------------------------------------------
Confidence 99999999999998653211000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC--CCCccCcchhHHHHHHHhhc---CCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......|+..|+|||.+.+. .++.++|||||||++|+|++ ||.
T Consensus 162 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 162 --------------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred --------------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 00123678899999998753 47889999999999999999 664
Q ss_pred CChh---hHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 271 TGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
.... .......+.. ..++......+.+.+++.+||..+|.+|| ++.+++.||||....
T Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 210 VDGEKNSQAEISRRILK-SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred cCCccccHHHHHHHhhc-cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 2211 1111111111 12233334567788999999999999997 889999999998764
No 454
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.93 E-value=1.2e-26 Score=274.33 Aligned_cols=218 Identities=17% Similarity=0.201 Sum_probs=151.5
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC----------CCCCChhHHHHHHHHHHHHHHhh
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----------KRSVDVYECLHIFRQIVEIVYAA 98 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----------~~~l~~~~~~~i~~qi~~~l~~l 98 (879)
...+...+|++++..++ ++.+ ....|++|||++|++|.+++... ...++...++.++.||+.||+||
T Consensus 53 i~ILs~L~HPNIVkl~~-v~~d--~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yL 129 (932)
T PRK13184 53 AKIAADLIHPGIVPVYS-ICSD--GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYV 129 (932)
T ss_pred HHHHHhCCCcCcCeEEE-EEee--CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHH
Confidence 34456678888888776 5543 34679999999999999988431 12356678899999999999999
Q ss_pred hhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCC
Q 002801 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (879)
Q Consensus 99 Hs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (879)
|++||+||||||+|||++.++.+|++|||+++............ ..
T Consensus 130 Hs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l--------------------------------~~-- 175 (932)
T PRK13184 130 HSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDI--------------------------------DV-- 175 (932)
T ss_pred HHCCccccCCchheEEEcCCCCEEEEecCcceeccccccccccc--------------------------------cc--
Confidence 99999999999999999999999999999997642110000000 00
Q ss_pred cccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhH
Q 002801 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (879)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (879)
..... ...........+||+.|||||++.+..++.++|||||
T Consensus 176 -------~~~~s-------------------------------~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSL 217 (932)
T PRK13184 176 -------DERNI-------------------------------CYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYAL 217 (932)
T ss_pred -------ccccc-------------------------------cccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHH
Confidence 00000 0000001123579999999999999999999999999
Q ss_pred HHHHHHhhc---CCCCChhhHhHHhhhc-ccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 259 GVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 259 Gvil~ell~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||++|||++ ||.............. ...........++.+.+++.+||..||++||+..+.+.
T Consensus 218 GVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 218 GVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred HHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999 7755332222111111 11111112345677889999999999999987666554
No 455
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=4.5e-25 Score=229.02 Aligned_cols=255 Identities=22% Similarity=0.349 Sum_probs=204.5
Q ss_pred EEEEEEcC-------CCCEEEEEeCCCcEEEEecCcccCcCc--------------ccccceEEeccCCCeeEEEEeCCC
Q 002801 571 VCSLSFDR-------DGELFAAAGVNKKIKVFECDAIINENR--------------DIHYPVVEMASRSKLSSICWNSYI 629 (879)
Q Consensus 571 V~~l~fsp-------dg~~lat~~~dg~I~iwd~~~~~~~~~--------------~~~~~~~~~~~~~~i~~l~~~~~~ 629 (879)
..|++|.. -|.++|.|+.|..|.|||+.-...... ..........|+..|..++|+...
T Consensus 176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~ 255 (463)
T KOG0270|consen 176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF 255 (463)
T ss_pred chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence 35666643 367999999999999999864211000 000111122477788899999988
Q ss_pred CCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC-ceEEEEecCCceEEE
Q 002801 630 KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG-VSIGTIKTKANVCCV 708 (879)
Q Consensus 630 ~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~-~~i~~~~~~~~v~~v 708 (879)
.+.||||+.|.+|++||+.++++...+..|.+.|.++.|+|..+..|++||.|++|.+.|++.. ..-..++..+.|..+
T Consensus 256 ~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv 335 (463)
T KOG0270|consen 256 RNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKV 335 (463)
T ss_pred ceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEE
Confidence 9999999999999999999999999999999999999999989999999999999999999953 334566778999999
Q ss_pred EeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCce
Q 002801 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPL 786 (879)
Q Consensus 709 ~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 786 (879)
+|+|.+.+.++++..||+|+.+|+|+...|+.++++|...|++|+++ ...+|+|+|.|+.+++|++..........
T Consensus 336 ~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~-- 413 (463)
T KOG0270|consen 336 AWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKE-- 413 (463)
T ss_pred EecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccc--
Confidence 99999889999999999999999999988999999999999999998 77899999999999999998764321111
Q ss_pred EEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecCCCCCce
Q 002801 787 HSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPMPAL 829 (879)
Q Consensus 787 ~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~~~~~~~ 829 (879)
+.+. -+...|.++.|+-. .+|.||..+.++|||+.+..++.
T Consensus 414 ~~~~--~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 414 HSFK--LGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred cccc--ccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence 1111 12245667777654 67888888899999998766554
No 456
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.93 E-value=2.8e-26 Score=248.92 Aligned_cols=200 Identities=15% Similarity=0.111 Sum_probs=147.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC----------CCCChhHHHHHHHHHHHHHHhhhh
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~----------~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.+....|++++..++ .+.+ ....|++|||+.+++|.+++.... ..+++..+..++.||+.||+|||+
T Consensus 72 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~ 148 (296)
T cd05095 72 IMSRLKDPNIIRLLA-VCIT--SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS 148 (296)
T ss_pred HHHhCCCCCcceEEE-EEec--CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 344567788877666 4433 345799999999999999985421 236778999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+|||++.++.++++|||+++........
T Consensus 149 ~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------ 186 (296)
T cd05095 149 LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY------------------------------------------ 186 (296)
T ss_pred CCeecccCChheEEEcCCCCEEeccCcccccccCCcce------------------------------------------
Confidence 99999999999999999999999999998653211000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
.......++..|+|||+..+..++.++|||||||
T Consensus 187 ----------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~ 220 (296)
T cd05095 187 ----------------------------------------------RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGV 220 (296)
T ss_pred ----------------------------------------------eccCcCcCccccCCHHHHhcCCccchhhhhHHHH
Confidence 0001123466799999988888999999999999
Q ss_pred HHHHhhc-----CCCCChhhHhHHhh------hcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 261 LLFELFC-----PFSTGEEKTRTMSS------LRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 261 il~ell~-----pf~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++|||++ ||............ .......+....+++.+.+|+.+||+.||.+||++.++++
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 221 TLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999986 66433222211110 0111122333345678889999999999999999999875
No 457
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.93 E-value=3.3e-26 Score=273.30 Aligned_cols=97 Identities=10% Similarity=0.074 Sum_probs=84.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..+. ++. .....||||||+.|++|.+++... +.+++..++.|+.||+.||+|||++|||||||||+
T Consensus 58 l~~l~hp~Iv~~~~-~~~--~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~ 133 (669)
T cd05610 58 LALSKSPFIVHLYY-SLQ--SANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPD 133 (669)
T ss_pred HHhcCCCCcCeEEE-EEE--ECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHH
Confidence 44567888887775 333 234689999999999999999654 46899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCC
Q 002801 112 CFVMSSFNHVSFIESASCSDS 132 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~ 132 (879)
||||+.++.+||+|||+++..
T Consensus 134 NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 134 NMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred HEEEcCCCCEEEEeCCCCccc
Confidence 999999999999999999854
No 458
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.93 E-value=3.1e-26 Score=248.23 Aligned_cols=205 Identities=18% Similarity=0.222 Sum_probs=150.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+.+ ....|+||||++ ++|.+++.. ....+++..+..++.||+.||+|||++||+|||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~ 129 (294)
T PLN00009 54 LLKEMQHGNIVRLQD-VVHS--EKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLK 129 (294)
T ss_pred HHHhccCCCEeeEEE-EEec--CCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence 444557788877776 4433 347899999995 578887743 33346888999999999999999999999999999
Q ss_pred Ccceeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 110 PSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 110 P~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
|+||+++. .+.+|++|||++...+....
T Consensus 130 p~nill~~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------------- 158 (294)
T PLN00009 130 PQNLLIDRRTNALKLADFGLARAFGIPVR--------------------------------------------------- 158 (294)
T ss_pred cceEEEECCCCEEEEcccccccccCCCcc---------------------------------------------------
Confidence 99999985 45799999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~ 267 (879)
..+...|++.|+|||.+.+. .++.++|||||||++|+|++
T Consensus 159 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~t 199 (294)
T PLN00009 159 ---------------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVN 199 (294)
T ss_pred ---------------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 00123568899999998764 47999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhc--ccC---------------------CCc----hhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 ---PFSTGEEKTRTMSSLR--HRV---------------------LPP----QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~--~~~---------------------~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.............. ... .+. .....++.+.+++.+||..+|++||++.
T Consensus 200 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ 279 (294)
T PLN00009 200 QKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITAR 279 (294)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHH
Confidence 6654433322222111 000 000 1123456788999999999999999999
Q ss_pred HHhhcccccCCc
Q 002801 318 ELLQSEFLNEPR 329 (879)
Q Consensus 318 evl~hp~~~~~~ 329 (879)
++++||||....
T Consensus 280 ~~l~~~~~~~~~ 291 (294)
T PLN00009 280 AALEHEYFKDLG 291 (294)
T ss_pred HHhcCchHhHHh
Confidence 999999998653
No 459
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.93 E-value=4.1e-26 Score=242.66 Aligned_cols=198 Identities=13% Similarity=0.121 Sum_probs=152.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+. .....|++|||+++++|.+++.... ..+++..++.++.||+.||.|||++||+|+|||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~--~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~ 130 (261)
T cd05034 54 IMKKLRHDKLVQLYA-VCS--EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLA 130 (261)
T ss_pred HHhhCCCCCEeeeee-eee--cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence 344567888877766 333 2346899999999999999995533 468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||++.........
T Consensus 131 p~nili~~~~~~~l~d~g~~~~~~~~~~~--------------------------------------------------- 159 (261)
T cd05034 131 ARNILVGENLVCKIADFGLARLIEDDEYT--------------------------------------------------- 159 (261)
T ss_pred hheEEEcCCCCEEECccccceeccchhhh---------------------------------------------------
Confidence 99999999999999999998654211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 160 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g 201 (261)
T cd05034 160 --------------------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred --------------------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCC
Confidence 0000123557999999998889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+......+.....+..+.+++.+||..+|.+||++.++++
T Consensus 202 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 202 RVPYPGMTN-REVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred CCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 6644333 3333333333333344455678899999999999999999999864
No 460
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=2.4e-23 Score=197.54 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=206.5
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE-eccCCCeeEEEEeC--CC-CCeEEEee-C
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNS--YI-KSQIASSN-F 638 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~~~--~~-~~~l~s~~-~ 638 (879)
-.+|.+.|+|.+|+|+|++||||+.|++|++.-++...+.... +-.+ .-|.+.|..++|-. .. +.+|++++ .
T Consensus 85 ~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g---~dle~nmhdgtirdl~fld~~~s~~~il~s~gag 161 (350)
T KOG0641|consen 85 NKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATG---HDLEFNMHDGTIRDLAFLDDPESGGAILASAGAG 161 (350)
T ss_pred ccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccC---cceeeeecCCceeeeEEecCCCcCceEEEecCCC
Confidence 3589999999999999999999999999999888764332221 1222 23789999999943 22 34566554 3
Q ss_pred CCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec--------CCceEEEEe
Q 002801 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT--------KANVCCVQF 710 (879)
Q Consensus 639 dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~--------~~~v~~v~~ 710 (879)
|-.|++-|..+++....+.+|++-|.++--- ++-+|++||.|.+|+.||++-..++.++.. .+.|.+|+.
T Consensus 162 dc~iy~tdc~~g~~~~a~sghtghilalysw--n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v 239 (350)
T KOG0641|consen 162 DCKIYITDCGRGQGFHALSGHTGHILALYSW--NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV 239 (350)
T ss_pred cceEEEeecCCCCcceeecCCcccEEEEEEe--cCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE
Confidence 5566666888999999999999999887432 688999999999999999999999988863 245999999
Q ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEE
Q 002801 711 PLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF 789 (879)
Q Consensus 711 ~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~ 789 (879)
.|. |++|++|..|....+||+|.++ ++..|..|...|.+|.|+ .-.+++++|.|.+|++-|+...-.. ..++...
T Consensus 240 dps-grll~sg~~dssc~lydirg~r-~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~--el~~~vv 315 (350)
T KOG0641|consen 240 DPS-GRLLASGHADSSCMLYDIRGGR-MIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAH--ELPIMVV 315 (350)
T ss_pred CCC-cceeeeccCCCceEEEEeeCCc-eeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhh--cCceEEE
Confidence 999 9999999999999999999988 589999999999999999 6788999999999999998764211 1345566
Q ss_pred eCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecC
Q 002801 790 TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 790 ~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~ 823 (879)
..|...+..+.|+|.+--+++.|.|.++.+|-+.
T Consensus 316 ~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 316 AEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 6788889999999999889999999999999653
No 461
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.93 E-value=2.7e-26 Score=246.83 Aligned_cols=200 Identities=20% Similarity=0.179 Sum_probs=153.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-------CCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-------RSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-------~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
.+...+|++++..++ .+.++ ....|+++||+.+++|.++|.... ..+++..++.++.||+.||+|||++||
T Consensus 61 ~l~~l~h~ni~~~~~-~~~~~-~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i 138 (280)
T cd05043 61 LLYGLSHQNILPILH-VCIED-GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGV 138 (280)
T ss_pred HHHhCCCCCCCeEEE-EEecC-CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 344568888888766 44433 456899999999999999985421 458999999999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+||||||+||+++.++.+|++|||+++.+.......
T Consensus 139 ~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~-------------------------------------------- 174 (280)
T cd05043 139 IHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHC-------------------------------------------- 174 (280)
T ss_pred eecccCHhhEEEcCCCcEEECCCCCcccccCCceEE--------------------------------------------
Confidence 999999999999999999999999997642110000
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
......++..|+|||++.+..++.++|||||||++|
T Consensus 175 --------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~ 210 (280)
T cd05043 175 --------------------------------------------LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLW 210 (280)
T ss_pred --------------------------------------------eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHH
Confidence 000113466799999998888999999999999999
Q ss_pred Hhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 264 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 264 ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|+++ ||..... ......+.....++.....++.+.+++.+||..||++|||+.++++
T Consensus 211 el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 211 ELMTLGQTPYVEIDP-FEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHhcCCCCCcCcCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9996 6654332 2333333333333334455678899999999999999999999975
No 462
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=1e-24 Score=216.13 Aligned_cols=279 Identities=18% Similarity=0.287 Sum_probs=230.6
Q ss_pred eecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecC------cc---------
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD------AI--------- 600 (879)
Q Consensus 536 ~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~------~~--------- 600 (879)
+-+++.|.+..+|.+.++++...+. ||.+.|++|+|++.+.+++|++.|++-.||... ..
T Consensus 163 ~gtASADhTA~iWs~Esg~CL~~Y~-----GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsE 237 (481)
T KOG0300|consen 163 CGTASADHTARIWSLESGACLATYT-----GHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSE 237 (481)
T ss_pred eeecccccceeEEeeccccceeeec-----ccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCch
Confidence 3577889999999999999987764 999999999999999999999999999999731 10
Q ss_pred -----------------cCcCcccccceEEe-ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCc
Q 002801 601 -----------------INENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERR 662 (879)
Q Consensus 601 -----------------~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~ 662 (879)
..+...+..|+..+ +|.+.|.+..|.. .+..+++++.|.+..+||+++++.+..+.+|...
T Consensus 238 eE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~E 316 (481)
T KOG0300|consen 238 EEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGHDSE 316 (481)
T ss_pred hhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCcchh
Confidence 00001122344443 5888999999987 4899999999999999999999999999999999
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEeCCCC-ceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeE
Q 002801 663 VWSIDFSSADPTLLASGSDDGSVKLWSINQG-VSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLC 740 (879)
Q Consensus 663 v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~-~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~ 740 (879)
.+.++-+| +..++++.|.|.+.++||++.. ..+..|+.+ ..|+++.|..+ ..+++|+.|.+|++||+++++.|+.
T Consensus 317 LtHcstHp-tQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~d--d~vVSgSDDrTvKvWdLrNMRsplA 393 (481)
T KOG0300|consen 317 LTHCSTHP-TQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTD--DRVVSGSDDRTVKVWDLRNMRSPLA 393 (481)
T ss_pred ccccccCC-cceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecC--CceeecCCCceEEEeeeccccCcce
Confidence 99999999 8899999999999999999844 456667754 56999999987 5689999999999999999999999
Q ss_pred EEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCC--CEEEEEeCCCcE
Q 002801 741 TLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD--GYVATGSETNEV 817 (879)
Q Consensus 741 ~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~--~~lasgs~Dg~v 817 (879)
++.. .++++.+..+ .+.+|+.-.....|++||++..... ..|...-+||...|.|++|..+- .-|.+||-|..+
T Consensus 394 TIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~Rla--RlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v 470 (481)
T KOG0300|consen 394 TIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLA--RLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMV 470 (481)
T ss_pred eeec-CCccceeEeecCCceEEeccCCceEEEEecCCCccc--cCCcccccccceeeeeeeccccCccccccccccccee
Confidence 8864 5688999999 5557777777889999999875321 23444667999999999998653 368899999999
Q ss_pred EEEecCCCC
Q 002801 818 FVYHKAFPM 826 (879)
Q Consensus 818 ~vw~~~~~~ 826 (879)
.-|.+..++
T Consensus 471 ~gW~in~p~ 479 (481)
T KOG0300|consen 471 AGWKINTPT 479 (481)
T ss_pred eeeEecccC
Confidence 999988654
No 463
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.93 E-value=3.8e-26 Score=245.81 Aligned_cols=200 Identities=19% Similarity=0.249 Sum_probs=150.2
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ ++.+ ....|++|||+. ++|.+++.+....+++..++.++.||+.||.|||++||+|+||+|+
T Consensus 52 l~~~~~~~i~~~~~-~~~~--~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ 127 (282)
T cd07829 52 LKELKHPNIVKLLD-VIHT--ERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQ 127 (282)
T ss_pred HHhcCCCCHHHHHh-hhhc--CCceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChh
Confidence 34445777776665 3433 357899999997 5999999765457999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++|+|||.++.......
T Consensus 128 ni~~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------------ 153 (282)
T cd07829 128 NILINRDGVLKLADFGLARAFGIPLR------------------------------------------------------ 153 (282)
T ss_pred eEEEcCCCCEEEecCCcccccCCCcc------------------------------------------------------
Confidence 99999999999999999865421100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc---
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~--- 267 (879)
......++.+|+|||.+.+. .++.++|||||||++|||++
T Consensus 154 ------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~ 197 (282)
T cd07829 154 ------------------------------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKP 197 (282)
T ss_pred ------------------------------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCC
Confidence 00112457789999999776 68999999999999999999
Q ss_pred CCCCChhhHhHHhhhc-------------------ccCCC--------chhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 268 PFSTGEEKTRTMSSLR-------------------HRVLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~-------------------~~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
||.............. ....+ ......+..+.+++.+||..+|++||++.+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 277 (282)
T cd07829 198 LFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEAL 277 (282)
T ss_pred CCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHh
Confidence 5544322211111000 00000 11122356788999999999999999999999
Q ss_pred hcccc
Q 002801 321 QSEFL 325 (879)
Q Consensus 321 ~hp~~ 325 (879)
.||||
T Consensus 278 ~~p~~ 282 (282)
T cd07829 278 KHPYF 282 (282)
T ss_pred hCcCC
Confidence 99997
No 464
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.93 E-value=2.8e-26 Score=247.12 Aligned_cols=203 Identities=20% Similarity=0.180 Sum_probs=152.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ ++.+......|++|||+++++|.+++......+++..++.++.||+.||.|||++||+|+||||
T Consensus 59 ~l~~l~~~~i~~~~~-~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p 137 (284)
T cd05038 59 ILRTLDHENIVKYKG-VCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAA 137 (284)
T ss_pred HHHhCCCCChheEEe-eeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 344567777777655 6666556678999999999999999966555689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||.+...........
T Consensus 138 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-------------------------------------------------- 167 (284)
T cd05038 138 RNILVESEDLVKISDFGLAKVLPEDKDYYY-------------------------------------------------- 167 (284)
T ss_pred HhEEEcCCCCEEEcccccccccccCCccee--------------------------------------------------
Confidence 999999999999999999876421100000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 168 -------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~ 210 (284)
T cd05038 168 -------------------------------------VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD 210 (284)
T ss_pred -------------------------------------ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC
Confidence 0001133556999999988889999999999999999999
Q ss_pred CCCCChhhH--------------hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEKT--------------RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|+....... .....+......+.....+..+.+++.+||..+|.+|||+.|+++
T Consensus 211 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 211 PSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred CcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 554322111 111111222222233345577889999999999999999999976
No 465
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.93 E-value=1.6e-24 Score=210.37 Aligned_cols=237 Identities=22% Similarity=0.348 Sum_probs=205.6
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEE--eccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE--MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~--~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~ 692 (879)
.|..++.+|+|+. ++..|++|+.|+++.+|+++..+.... +.+|.+.|-.++|+|..+.+|++++.|.+|++||+++
T Consensus 18 ~~~~~v~Sv~wn~-~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~ 96 (313)
T KOG1407|consen 18 GHVQKVHSVAWNC-DGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRS 96 (313)
T ss_pred hhhhcceEEEEcc-cCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEecc
Confidence 4678999999998 499999999999999999987754433 4689999999999998899999999999999999999
Q ss_pred CceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEE
Q 002801 693 GVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKL 771 (879)
Q Consensus 693 ~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~l 771 (879)
++++..+.....-.-+.|+|+ +.++++|+.|..|.+.|.|+.+. +... .....+.-+.|+ ++++++....-|+|.|
T Consensus 97 ~k~~~~i~~~~eni~i~wsp~-g~~~~~~~kdD~it~id~r~~~~-~~~~-~~~~e~ne~~w~~~nd~Fflt~GlG~v~I 173 (313)
T KOG1407|consen 97 GKCTARIETKGENINITWSPD-GEYIAVGNKDDRITFIDARTYKI-VNEE-QFKFEVNEISWNNSNDLFFLTNGLGCVEI 173 (313)
T ss_pred CcEEEEeeccCcceEEEEcCC-CCEEEEecCcccEEEEEecccce-eehh-cccceeeeeeecCCCCEEEEecCCceEEE
Confidence 999999998888778999999 89999999999999999999873 4333 234567888998 7777777777799999
Q ss_pred EecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCE
Q 002801 772 WDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFI 851 (879)
Q Consensus 772 wd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 851 (879)
-..... +++.+++.|.....||.|+|+|+|+|+||.|-.+.+||+..--.+.. +.-+.-+|
T Consensus 174 LsypsL------kpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~-------------isRldwpV 234 (313)
T KOG1407|consen 174 LSYPSL------KPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERC-------------ISRLDWPV 234 (313)
T ss_pred Eecccc------ccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhhee-------------eccccCce
Confidence 998876 89999999999999999999999999999999999999875333322 24457789
Q ss_pred EEEEEeCCCCcEEEEEeCCCcEEE
Q 002801 852 SSVCWRGQSSNTLVAANSSGNIKI 875 (879)
Q Consensus 852 ~~v~~~p~~~~~l~s~~~Dg~I~v 875 (879)
+.+.|+-+|. +||+|+.|..|-|
T Consensus 235 RTlSFS~dg~-~lASaSEDh~IDI 257 (313)
T KOG1407|consen 235 RTLSFSHDGR-MLASASEDHFIDI 257 (313)
T ss_pred EEEEeccCcc-eeeccCccceEEe
Confidence 9999999999 9999999999865
No 466
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.93 E-value=3e-26 Score=253.34 Aligned_cols=219 Identities=16% Similarity=0.157 Sum_probs=156.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.. ....|++|||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|+||||
T Consensus 73 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~ 147 (335)
T PTZ00024 73 IMNEIKHENIMGLVD-VYVE--GDFINLVMDIMA-SDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSP 147 (335)
T ss_pred HHHhCCCcceeeeeE-EEec--CCcEEEEEeccc-cCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccH
Confidence 455567888877666 4433 346799999996 5899999554 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++..+.++++|||+++....+......... . .
T Consensus 148 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~--------------------------~----~-------------- 183 (335)
T PTZ00024 148 ANIFINSKGICKIADFGLARRYGYPPYSDTLSKD--------------------------E----T-------------- 183 (335)
T ss_pred HHeEECCCCCEEECCccceeeccccccccccccc--------------------------c----c--------------
Confidence 9999999999999999999765432111000000 0 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~-- 267 (879)
. ..........++..|+|||.+.+.. ++.++|||||||++|||++
T Consensus 184 ---------------------------~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 184 ---------------------------M-----QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ---------------------------c-----cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 0 0000012235688999999997654 7999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcc---cC--------------------CCc----hhhccChhhHHHHHHhcCCCCCCCCCHHHH
Q 002801 268 -PFSTGEEKTRTMSSLRH---RV--------------------LPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~---~~--------------------~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ev 319 (879)
||....... .+..+.. .. .++ .....+..+.++|.+||..+|++||+++++
T Consensus 232 ~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 310 (335)
T PTZ00024 232 PLFPGENEID-QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEA 310 (335)
T ss_pred CCCCCCCHHH-HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHH
Confidence 554433322 1111100 00 000 112235668899999999999999999999
Q ss_pred hhcccccCCcCc
Q 002801 320 LQSEFLNEPRDS 331 (879)
Q Consensus 320 l~hp~~~~~~~~ 331 (879)
+.||||+.....
T Consensus 311 l~~~~~~~~~~~ 322 (335)
T PTZ00024 311 LKHEYFKSDPLP 322 (335)
T ss_pred hcCcccCCCCCC
Confidence 999999875443
No 467
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.93 E-value=5.3e-26 Score=240.03 Aligned_cols=198 Identities=19% Similarity=0.209 Sum_probs=155.7
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+. ....+|++|||+.+++|.+++... ..+++.++..++.||+.||.|||++|++|+||||+
T Consensus 47 l~~l~h~~i~~~~~-~~~--~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ 122 (250)
T cd05123 47 LSRINHPFIVKLHY-AFQ--TEEKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPE 122 (250)
T ss_pred HHHcCCCcHHHHHH-Hee--cCCeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcc
Confidence 34456777777665 332 355789999999999999999655 46899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++++|||++........
T Consensus 123 ni~~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------------ 148 (250)
T cd05123 123 NILLDADGHIKLTDFGLAKELSSEGS------------------------------------------------------ 148 (250)
T ss_pred eEEEcCCCcEEEeecCcceecccCCC------------------------------------------------------
Confidence 99999999999999999865311100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
......|+..|+|||.+.+...+.++|+||||+++|||++ |
T Consensus 149 ------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p 192 (250)
T cd05123 149 ------------------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPP 192 (250)
T ss_pred ------------------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 0012367888999999988889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH---HHHhhcccc
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFL 325 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~evl~hp~~ 325 (879)
|........ ...+... ..+.....+..+.+++.+||..||.+||++ +++++||||
T Consensus 193 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 193 FYAEDRKEI-YEKILKD-PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCCCCHHHH-HHHHhcC-CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 755443222 2222221 222333346788999999999999999999 999999998
No 468
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.93 E-value=3.8e-26 Score=245.43 Aligned_cols=213 Identities=18% Similarity=0.178 Sum_probs=155.6
Q ss_pred cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeec
Q 002801 37 HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 116 (879)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~ 116 (879)
|++++..++ ++.+ ....|++||++.+++|.+++.+. +.+++..++.|+.||+.||.|||+.|++|+||||+||+++
T Consensus 61 ~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~ 136 (280)
T cd05581 61 HPGIIKLYY-TFQD--EENLYFVLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD 136 (280)
T ss_pred CCCchhHHH-HhcC--CceEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC
Confidence 888877666 4433 34689999999999999999665 4799999999999999999999999999999999999999
Q ss_pred cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcc
Q 002801 117 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 196 (879)
Q Consensus 117 ~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (879)
.++.++++|||++............... .. .
T Consensus 137 ~~~~~~l~df~~~~~~~~~~~~~~~~~~-------------~~---------------------------~--------- 167 (280)
T cd05581 137 KDMHIKITDFGTAKVLDPNSSPESNKGD-------------AT---------------------------N--------- 167 (280)
T ss_pred CCCCEEecCCccccccCCccccccCCCC-------------Cc---------------------------c---------
Confidence 9999999999999765332111000000 00 0
Q ss_pred eeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCCh
Q 002801 197 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE 273 (879)
Q Consensus 197 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~ 273 (879)
++. .............|+..|+|||.+.+..++.++|||||||++|+|++ ||....
T Consensus 168 -------------~~~--------~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 168 -------------IDS--------QIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred -------------ccc--------cccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 000 00000001123478899999999988889999999999999999999 665443
Q ss_pred hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH----HHHhhcccc
Q 002801 274 EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFL 325 (879)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~evl~hp~~ 325 (879)
......... .. ........++.+.+|+.+||..+|.+||++ +++++||||
T Consensus 227 ~~~~~~~~~-~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 227 EYLTFQKIL-KL-EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHHHH-hc-CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 322222222 11 111222346788999999999999999999 999999997
No 469
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.93 E-value=5.1e-26 Score=243.21 Aligned_cols=200 Identities=14% Similarity=0.109 Sum_probs=144.4
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC----CCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
..+.+..|++++..++ .+.+ ....|++|||+++++|.++|... ...+++..++.++.||+.||+|||+.||+|
T Consensus 47 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H 123 (269)
T cd05087 47 QPYRSLQHSNLLQCLG-QCTE--VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIH 123 (269)
T ss_pred HHHHhCCCCCEeeEEE-EEcC--CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 3445667888877665 4443 34579999999999999999532 124567788899999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+||+++.++.+|++|||+++........
T Consensus 124 ~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~----------------------------------------------- 156 (269)
T cd05087 124 SDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY----------------------------------------------- 156 (269)
T ss_pred cccCcceEEEcCCCcEEECCccccccccCccee-----------------------------------------------
Confidence 999999999999999999999998642111000
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-------CCCccCcchhH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-------PVSCASDIYRL 258 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~~~~sDIwSl 258 (879)
.......|+..|+|||++.+. .++.++|||||
T Consensus 157 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl 195 (269)
T cd05087 157 -----------------------------------------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSL 195 (269)
T ss_pred -----------------------------------------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHH
Confidence 000123567889999998642 35889999999
Q ss_pred HHHHHHhhc----CCCCChhhHhHHhhhccc---CC-CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 259 GVLLFELFC----PFSTGEEKTRTMSSLRHR---VL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 259 Gvil~ell~----pf~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||++|||++ ||................ .. +......++.+.+++..|+ .+|++|||+++++.
T Consensus 196 G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 196 GVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred HHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 999999985 775443333222222211 11 1112234566789999998 68999999999974
No 470
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.93 E-value=3.5e-24 Score=212.20 Aligned_cols=249 Identities=20% Similarity=0.303 Sum_probs=198.2
Q ss_pred cCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCC-CeE-EEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR-SQV-LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 616 ~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~-~~~-~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
....|++|+|+|.....+++|+.||+|++|+++. ++. .+....|.++|.+++|+. +|+.+++|+.|+.+++||+.++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEEEEccCC
Confidence 5678999999997788899999999999999976 332 244567999999999998 9999999999999999999999
Q ss_pred ceEEEEecCCceEEEEeeCCCCC--EEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEE
Q 002801 694 VSIGTIKTKANVCCVQFPLDSGR--SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKL 771 (879)
Q Consensus 694 ~~i~~~~~~~~v~~v~~~p~~~~--~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~l 771 (879)
+....-.|.++|.++.|-+. .. .|+|||.|.+|++||+|... ++.++.-. ..|+++.. -...++.+..++.|.+
T Consensus 105 Q~~~v~~Hd~pvkt~~wv~~-~~~~cl~TGSWDKTlKfWD~R~~~-pv~t~~LP-eRvYa~Dv-~~pm~vVata~r~i~v 180 (347)
T KOG0647|consen 105 QVSQVAAHDAPVKTCHWVPG-MNYQCLVTGSWDKTLKFWDTRSSN-PVATLQLP-ERVYAADV-LYPMAVVATAERHIAV 180 (347)
T ss_pred CeeeeeecccceeEEEEecC-CCcceeEecccccceeecccCCCC-eeeeeecc-ceeeehhc-cCceeEEEecCCcEEE
Confidence 88777778889999999876 44 79999999999999999877 57776543 34454433 3457888889999999
Q ss_pred EecCCCcccccCCceEEE-eCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002801 772 WDLSMCTSRVIDTPLHSF-TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF 850 (879)
Q Consensus 772 wd~~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 850 (879)
|++.++.. ..+.. ..-.-.+.+|+..++....|.||-.|.+.|.++..+.+...+.|.......+ ..+.-..
T Consensus 181 ynL~n~~t-----e~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~--~~~~VYa 253 (347)
T KOG0647|consen 181 YNLENPPT-----EFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNS--VNDDVYA 253 (347)
T ss_pred EEcCCCcc-----hhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCC--CCCceEE
Confidence 99987631 11111 1122357899999998888999999999999999987766666554332111 2233578
Q ss_pred EEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 851 ISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 851 V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|++|+|+|.-. +|+|+|+||++.+||
T Consensus 254 VNsi~FhP~hg-tlvTaGsDGtf~FWD 279 (347)
T KOG0647|consen 254 VNSIAFHPVHG-TLVTAGSDGTFSFWD 279 (347)
T ss_pred ecceEeecccc-eEEEecCCceEEEec
Confidence 99999999888 999999999999998
No 471
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.93 E-value=7.8e-26 Score=244.36 Aligned_cols=201 Identities=19% Similarity=0.183 Sum_probs=151.3
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ ... .....|+||||+.|++|.+++.+. ..+++.+++.++.|++.||+|||+.|++||||||+||++
T Consensus 63 ~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~ 138 (288)
T cd05583 63 RCPFLVTLHY-AFQ--TDTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL 138 (288)
T ss_pred CCcchhhhhe-eee--cCCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE
Confidence 5667766555 222 234679999999999999999654 468999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.++++|||+++........
T Consensus 139 ~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------------- 161 (288)
T cd05583 139 DSEGHVVLTDFGLSKEFLAEEEE--------------------------------------------------------- 161 (288)
T ss_pred CCCCCEEEEECcccccccccccc---------------------------------------------------------
Confidence 99999999999998653211000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC--CCccCcchhHHHHHHHhhc---CCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......|+..|+|||.+.+.. .+.++||||||+++|||++ ||.
T Consensus 162 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 162 --------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred --------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence 001135788999999987765 7889999999999999999 664
Q ss_pred CChhh---HhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccccCCcC
Q 002801 271 TGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPRD 330 (879)
Q Consensus 271 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~~~~~~ 330 (879)
..... .......... .++......+.+.+++.+||..+|++||| +.++|+||||+....
T Consensus 210 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 210 VDGEQNSQSEISRRILKS-KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred cCcccchHHHHHHHHHcc-CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 32111 1111111111 22333345678899999999999999998 467799999987654
No 472
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=8.3e-24 Score=220.24 Aligned_cols=292 Identities=16% Similarity=0.265 Sum_probs=237.3
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEE
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (879)
Q Consensus 567 h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd 646 (879)
..++|++|.|+|...++++||.||+++||.++...+...... .-...+|.+.+|.|...+.+++++.-...+.||
T Consensus 212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~-----~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyD 286 (514)
T KOG2055|consen 212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSI-----HLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYD 286 (514)
T ss_pred CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheee-----eeccCccceeeecCCCceEEEecccceEEEEee
Confidence 457899999999999999999999999999987444311110 113568999999997555999999999999999
Q ss_pred cCCCeEE--EEeccCC-CcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeC
Q 002801 647 VSRSQVL--TEMREHE-RRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 647 ~~~~~~~--~~~~~h~-~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~ 723 (879)
+.+.+.. ....++. ..+.....+| ++++++..+..|.|.|....+++.+.+++..+.|..++|+.+ +..|++++.
T Consensus 287 le~ak~~k~~~~~g~e~~~~e~FeVSh-d~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSd-sk~l~~~~~ 364 (514)
T KOG2055|consen 287 LETAKVTKLKPPYGVEEKSMERFEVSH-DSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSD-SKELLASGG 364 (514)
T ss_pred ccccccccccCCCCcccchhheeEecC-CCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecC-CcEEEEEcC
Confidence 9988753 3344444 4577778888 899999999999999999999999999999999999999988 688888888
Q ss_pred CCeEEEEEcCCCceeeEEEccCCCCE--EEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEE
Q 002801 724 DHRIYYYDLRNSKIPLCTLIGHNKTV--SYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800 (879)
Q Consensus 724 d~~I~iwDl~~~~~~~~~~~~h~~~V--~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~ 800 (879)
+|.|++||++.... ++.+.. .+.| ++++-+ ++.+||+||..|.|.|||.++.......+|+..+..-+..|+++.
T Consensus 365 ~GeV~v~nl~~~~~-~~rf~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~ 442 (514)
T KOG2055|consen 365 TGEVYVWNLRQNSC-LHRFVD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQ 442 (514)
T ss_pred CceEEEEecCCcce-EEEEee-cCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeee
Confidence 99999999999864 776653 3344 455556 999999999999999999887654445688888888888999999
Q ss_pred EecCCCEEEEEeC--CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 801 LSVWDGYVATGSE--TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 801 ~sp~~~~lasgs~--Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
|+++++.||.+|. ++.+++-++.+-..-. .|+... ..-+.|+|++|+|.|. +||.|+.+|.+.+|.|
T Consensus 443 Fn~d~qiLAiaS~~~knalrLVHvPS~TVFs--NfP~~n--------~~vg~vtc~aFSP~sG-~lAvGNe~grv~l~kL 511 (514)
T KOG2055|consen 443 FNHDAQILAIASRVKKNALRLVHVPSCTVFS--NFPTSN--------TKVGHVTCMAFSPNSG-YLAVGNEAGRVHLFKL 511 (514)
T ss_pred eCcchhhhhhhhhccccceEEEeccceeeec--cCCCCC--------CcccceEEEEecCCCc-eEEeecCCCceeeEee
Confidence 9999998888775 6889999987543322 232222 2356799999999999 9999999999999986
No 473
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.93 E-value=6.9e-25 Score=229.30 Aligned_cols=263 Identities=21% Similarity=0.303 Sum_probs=223.5
Q ss_pred cCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc-CCCe
Q 002801 542 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKL 620 (879)
Q Consensus 542 d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~-~~~i 620 (879)
-|-|||||++.-.-..-..+-++..-.+-|.++.+.|||+.|++||.-.++.|||+......-. .++.. .-.+
T Consensus 439 kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprik------aeltssapaC 512 (705)
T KOG0639|consen 439 KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIK------AELTSSAPAC 512 (705)
T ss_pred CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchh------hhcCCcchhh
Confidence 7899999998754443344456667788999999999999999999999999999986322111 11112 2346
Q ss_pred eEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 002801 621 SSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 700 (879)
Q Consensus 621 ~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~ 700 (879)
..++.+|. .+..+++..||.|.|||+.+...++.|.+|+..+.||++++ +|..|.||+-|.+|+.||++++..+....
T Consensus 513 yALa~spD-akvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~-dGtklWTGGlDntvRcWDlregrqlqqhd 590 (705)
T KOG0639|consen 513 YALAISPD-AKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISK-DGTKLWTGGLDNTVRCWDLREGRQLQQHD 590 (705)
T ss_pred hhhhcCCc-cceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecC-CCceeecCCCccceeehhhhhhhhhhhhh
Confidence 67888884 78888888899999999999999999999999999999999 99999999999999999999999998888
Q ss_pred cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcc
Q 002801 701 TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTS 779 (879)
Q Consensus 701 ~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~ 779 (879)
..+.|.++.+.|. +.++++|-.++.|.+....... ...+..|.+.|.+++|. -|+++++.+.|+.+..|.+..+
T Consensus 591 F~SQIfSLg~cP~-~dWlavGMens~vevlh~skp~--kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyG-- 665 (705)
T KOG0639|consen 591 FSSQIFSLGYCPT-GDWLAVGMENSNVEVLHTSKPE--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG-- 665 (705)
T ss_pred hhhhheecccCCC-ccceeeecccCcEEEEecCCcc--ceeecccccEEEEEEecccCceeeecCchhhhhhccCccc--
Confidence 8999999999999 8999999999999888877665 45666799999999999 9999999999999999999887
Q ss_pred cccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEec
Q 002801 780 RVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 780 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~ 822 (879)
..+...+ ....|.++..|.|++||+|||.|....||.+
T Consensus 666 ----asiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 666 ----ASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ----cceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 3333333 4567999999999999999999999999975
No 474
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.93 E-value=9.6e-24 Score=205.57 Aligned_cols=239 Identities=18% Similarity=0.265 Sum_probs=211.6
Q ss_pred cceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEE
Q 002801 609 YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (879)
Q Consensus 609 ~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iw 688 (879)
.|+...+|..+|+-|.+|.. +++|.+++.|.++.||-..+|+.+.++.+|++.|||++.+. +..++++|+.|.+++||
T Consensus 2 rpi~l~GHERplTqiKyN~e-GDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~-~s~~liTGSAD~t~kLW 79 (327)
T KOG0643|consen 2 RPILLQGHERPLTQIKYNRE-GDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDW-DSKHLITGSADQTAKLW 79 (327)
T ss_pred CccccccCccccceEEecCC-CcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecC-CcceeeeccccceeEEE
Confidence 35667789999999999984 99999999999999999989999999999999999999998 88999999999999999
Q ss_pred eCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeC-----CCeEEEEEcCCC------ceeeEEEccCCCCEEEEEEc-C
Q 002801 689 SINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSA-----DHRIYYYDLRNS------KIPLCTLIGHNKTVSYVKFV-D 756 (879)
Q Consensus 689 d~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~-----d~~I~iwDl~~~------~~~~~~~~~h~~~V~~v~fs-~ 756 (879)
|+.+|+++.+++.+..|..+.|+++ +++++.... .+.|.++|++.. +.|+..+..+.+.++.+.|. -
T Consensus 80 Dv~tGk~la~~k~~~~Vk~~~F~~~-gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l 158 (327)
T KOG0643|consen 80 DVETGKQLATWKTNSPVKRVDFSFG-GNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL 158 (327)
T ss_pred EcCCCcEEEEeecCCeeEEEeeccC-CcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc
Confidence 9999999999999999999999999 777766643 458999999943 34688888889999999998 9
Q ss_pred CCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCC
Q 002801 757 ATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHA 836 (879)
Q Consensus 757 ~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~ 836 (879)
++.|++|..||.|.+||++++. ..+.+-.-|...|+.+.++++..|++|||.|.+.++||+.+-+.+.++..
T Consensus 159 ~~~ii~Ghe~G~is~~da~~g~-----~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t--- 230 (327)
T KOG0643|consen 159 GETIIAGHEDGSISIYDARTGK-----ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT--- 230 (327)
T ss_pred CCEEEEecCCCcEEEEEcccCc-----eeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeee---
Confidence 9999999999999999999973 45666678999999999999999999999999999999998887777652
Q ss_pred CCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCC
Q 002801 837 DPLSGPETDDAAQFISSVCWRGQSSNTLVAANSS 870 (879)
Q Consensus 837 ~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~D 870 (879)
..+|++.+++|... .++.+|..
T Consensus 231 -----------e~PvN~aaisP~~d-~VilgGGq 252 (327)
T KOG0643|consen 231 -----------ERPVNTAAISPLLD-HVILGGGQ 252 (327)
T ss_pred -----------cccccceecccccc-eEEecCCc
Confidence 34699999999887 66655543
No 475
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.93 E-value=4.6e-23 Score=228.38 Aligned_cols=310 Identities=16% Similarity=0.210 Sum_probs=243.7
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
+.|+..|-+++|++.+++++.+++ ++.+.|+++.=+|-=+.+|.|..+|+|.||++... ..+..+.+
T Consensus 176 vvGs~~G~lql~Nvrt~K~v~~f~-----~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~d--------kil~sFk~ 242 (910)
T KOG1539|consen 176 VVGSSQGRLQLWNVRTGKVVYTFQ-----EFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFD--------KILMSFKQ 242 (910)
T ss_pred EEeecCCcEEEEEeccCcEEEEec-----ccccceeEeccCCcceEEEEeccCceEEEEEcccC--------cEEEEEEc
Confidence 678999999999999999998887 56689999999998889999999999999998753 23455666
Q ss_pred C-CCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEec-cCCCcEEEEEEecCCCCEEEEEeCCCcEEEE------
Q 002801 617 R-SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLW------ 688 (879)
Q Consensus 617 ~-~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~-~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iw------ 688 (879)
. +.|++++|.......+++|+..|.+.+||++..+.+..+. .|.+.|....|-| ....+++.+.|.++++|
T Consensus 243 d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~-~epVl~ta~~DnSlk~~vfD~~d 321 (910)
T KOG1539|consen 243 DWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLP-GEPVLVTAGADNSLKVWVFDSGD 321 (910)
T ss_pred cccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecC-CCceEeeccCCCceeEEEeeCCC
Confidence 5 9999999988766788888889999999998776654443 4555555555555 44455555555555444
Q ss_pred -----------------------------------------eCCC-----------------------------------
Q 002801 689 -----------------------------------------SINQ----------------------------------- 692 (879)
Q Consensus 689 -----------------------------------------d~~~----------------------------------- 692 (879)
++.+
T Consensus 322 g~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~f 401 (910)
T KOG1539|consen 322 GVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEF 401 (910)
T ss_pred CcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceee
Confidence 2210
Q ss_pred ------------------C-ceEEEE------------ecC------CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCC
Q 002801 693 ------------------G-VSIGTI------------KTK------ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS 735 (879)
Q Consensus 693 ------------------~-~~i~~~------------~~~------~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~ 735 (879)
+ ....++ .+. ..+.+|+.++- |++.+.|+..|.|-+|++.++
T Consensus 402 a~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~C-GNF~~IG~S~G~Id~fNmQSG 480 (910)
T KOG1539|consen 402 AFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFC-GNFVFIGYSKGTIDRFNMQSG 480 (910)
T ss_pred ecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEecc-CceEEEeccCCeEEEEEcccC
Confidence 0 000111 111 34788888887 899999999999999999988
Q ss_pred ceeeEEE---ccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCccc-------------------------------
Q 002801 736 KIPLCTL---IGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSR------------------------------- 780 (879)
Q Consensus 736 ~~~~~~~---~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~------------------------------- 780 (879)
-. ...| ..|.++|+.++.. -++.++|++.+|.+++||.+.....
T Consensus 481 i~-r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~ 559 (910)
T KOG1539|consen 481 IH-RKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIR 559 (910)
T ss_pred ee-ecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEE
Confidence 64 5566 5899999999997 8889999999999999999875310
Q ss_pred ----ccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEE
Q 002801 781 ----VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCW 856 (879)
Q Consensus 781 ----~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 856 (879)
...+.++.|.||++.|+.++|||||++|++++.|++|++||+.++..+-.+.+ ..++.++.|
T Consensus 560 vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~v--------------d~~~~sls~ 625 (910)
T KOG1539|consen 560 VVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLV--------------DSPCTSLSF 625 (910)
T ss_pred EEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEec--------------CCcceeeEE
Confidence 11235677889999999999999999999999999999999999988876653 345889999
Q ss_pred eCCCCcEEEEEeCC-CcEEEEE
Q 002801 857 RGQSSNTLVAANSS-GNIKILE 877 (879)
Q Consensus 857 ~p~~~~~l~s~~~D-g~I~vw~ 877 (879)
+|+|+ +|||+..| .-|++|-
T Consensus 626 SPngD-~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 626 SPNGD-FLATVHVDQNGIYLWS 646 (910)
T ss_pred CCCCC-EEEEEEecCceEEEEE
Confidence 99999 99999999 4599994
No 476
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.93 E-value=7.7e-26 Score=248.90 Aligned_cols=206 Identities=18% Similarity=0.214 Sum_probs=152.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ ++.. .....|++|||+ +++|.++++. ..+++..+..++.||+.||+|||++||+||||||
T Consensus 62 ~l~~l~hpniv~~~~-~~~~-~~~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p 136 (328)
T cd07856 62 LLKHLRHENIISLSD-IFIS-PLEDIYFVTELL-GTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKP 136 (328)
T ss_pred HHHhcCCCCeeeEee-eEec-CCCcEEEEeehh-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 344557788877665 3332 234679999998 6789998854 3578899999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||.+......
T Consensus 137 ~Nili~~~~~~~l~dfg~~~~~~~~------------------------------------------------------- 161 (328)
T cd07856 137 SNILINENCDLKICDFGLARIQDPQ------------------------------------------------------- 161 (328)
T ss_pred HHEeECCCCCEEeCccccccccCCC-------------------------------------------------------
Confidence 9999999999999999988542100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....++..|+|||.+.+ ..++.++|||||||++|||++
T Consensus 162 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~ 203 (328)
T cd07856 162 --------------------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203 (328)
T ss_pred --------------------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCC
Confidence 011356888999999876 558999999999999999999
Q ss_pred -CCCCChhhHhHH--------------------------hhhccc-CCC--chhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 -PFSTGEEKTRTM--------------------------SSLRHR-VLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 -pf~~~~~~~~~~--------------------------~~~~~~-~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.......... ..+... ..+ .......+.+.++|.+||..+|++||++.
T Consensus 204 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ 283 (328)
T cd07856 204 PLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAA 283 (328)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 664332211000 000000 001 01123456788999999999999999999
Q ss_pred HHhhcccccCCcCchHH
Q 002801 318 ELLQSEFLNEPRDSMEE 334 (879)
Q Consensus 318 evl~hp~~~~~~~~~~e 334 (879)
+++.||||.....+..+
T Consensus 284 ell~~~~~~~~~~~~~~ 300 (328)
T cd07856 284 EALAHPYLAPYHDPTDE 300 (328)
T ss_pred HHhcCCccccccCCccc
Confidence 99999999876666544
No 477
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.93 E-value=1.4e-23 Score=206.77 Aligned_cols=295 Identities=22% Similarity=0.293 Sum_probs=221.9
Q ss_pred CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccC--cCcccccce------EEeccCCCeeEEEEeCCCCCeEEEe
Q 002801 566 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIIN--ENRDIHYPV------VEMASRSKLSSICWNSYIKSQIASS 636 (879)
Q Consensus 566 ~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~--~~~~~~~~~------~~~~~~~~i~~l~~~~~~~~~l~s~ 636 (879)
.|.+.|+++..++ .|+++++|+.||.|.+||++.... ........+ .+..|+..|+++-|-|.+..++.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 6789999999998 799999999999999999986321 111111111 1235778899999999999999999
Q ss_pred eCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCC--CCEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCC
Q 002801 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD--PTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLD 713 (879)
Q Consensus 637 ~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~--~~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~ 713 (879)
+.|.+++|||.+|.|..-.|+ .++.|.+-+++|.. ..++|+|..|-.|++.|+.+|..-.++.. ..+|.+|.|+|.
T Consensus 121 SFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~ 199 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPS 199 (397)
T ss_pred cccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccC
Confidence 999999999999999887775 56788888888842 45889999999999999999999999985 567999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceeeEEE--------------ccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCc
Q 002801 714 SGRSLAFGSADHRIYYYDLRNSKIPLCTL--------------IGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCT 778 (879)
Q Consensus 714 ~~~~l~tgs~d~~I~iwDl~~~~~~~~~~--------------~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~ 778 (879)
....|++|+.||.|++||+|...-+...+ ..|.+.|..++|. ++.++++.+.|..+++|+..++.
T Consensus 200 ~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 200 SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 88889999999999999999864333333 3566789999998 99999999999999999999885
Q ss_pred ccc--cCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEE
Q 002801 779 SRV--IDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCW 856 (879)
Q Consensus 779 ~~~--~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 856 (879)
... ..+.++.-..|- ...+. +-+...++---.++.+.++.+-.+..+.-++ .|...|.+.++
T Consensus 280 ntl~~~g~~~~n~~~~~--~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~-------------~h~k~i~c~~~ 343 (397)
T KOG4283|consen 280 NTLREFGPIIHNQTTSF--AVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLS-------------THLKRINCAAY 343 (397)
T ss_pred ccccccccccccccccc--eEEEe-ecccceEEEEecCCeEEEEEccCceEEEeee-------------cccceeeEEee
Confidence 421 001111111110 00111 2222333333345667777766665554432 45566899999
Q ss_pred eCCCCcEEEEEeCCCcEEEEEe
Q 002801 857 RGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 857 ~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
.|+-. .+.++..||.|..|-.
T Consensus 344 ~~~fq-~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 344 RPDFE-QCFTGDMNGNIYMWSP 364 (397)
T ss_pred cCchh-hhhccccCCccccccc
Confidence 99988 8999999999999853
No 478
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=9.8e-25 Score=235.46 Aligned_cols=287 Identities=20% Similarity=0.317 Sum_probs=227.3
Q ss_pred CCCCCEE---EEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 566 NSSNLVC---SLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 566 ~h~~~V~---~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
.|.+.|. ++..+. ++++|.|||.||.|++|++........ ..+....-.|...|+.+..... ++.|+|++.|-+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s-~~~~asme~HsDWVNDiiL~~~-~~tlIS~SsDtT 96 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPS-TPYIASMEHHSDWVNDIILCGN-GKTLISASSDTT 96 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcc-cchhhhhhhhHhHHhhHHhhcC-CCceEEecCCce
Confidence 4566666 666664 677899999999999999876433211 1122233347778888888763 789999999999
Q ss_pred EEEEEcCCC--eEEEEeccCCCcEEEEEE-ecCCCCEEEEEeCCCcEEEEeCCCC--ceEEEEe----------cCCceE
Q 002801 642 VQVWDVSRS--QVLTEMREHERRVWSIDF-SSADPTLLASGSDDGSVKLWSINQG--VSIGTIK----------TKANVC 706 (879)
Q Consensus 642 V~vwd~~~~--~~~~~~~~h~~~v~sv~~-sp~~~~~lasgs~Dg~V~iwd~~~~--~~i~~~~----------~~~~v~ 706 (879)
|++|+...+ -++.++..|..-|.|+++ -+ +..++|||+-|+.|+|||++++ ..+.++. ++..|.
T Consensus 97 VK~W~~~~~~~~c~stir~H~DYVkcla~~ak-~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siY 175 (735)
T KOG0308|consen 97 VKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAK-NNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIY 175 (735)
T ss_pred EEEeecccCcchhHhhhhcccchheeeeeccc-CceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCcccee
Confidence 999999877 578888999999999999 55 8889999999999999999987 2333332 245699
Q ss_pred EEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCc
Q 002801 707 CVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTP 785 (879)
Q Consensus 707 ~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 785 (879)
+++.++. +..|++|+..+.+++||.++.+. +..++||+..|..+..+ ||..++|+|.||+|++||+... +|
T Consensus 176 SLA~N~t-~t~ivsGgtek~lr~wDprt~~k-imkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ------rC 247 (735)
T KOG0308|consen 176 SLAMNQT-GTIIVSGGTEKDLRLWDPRTCKK-IMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ------RC 247 (735)
T ss_pred eeecCCc-ceEEEecCcccceEEeccccccc-eeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc------ce
Confidence 9999998 78999999999999999999986 88899999999999999 9999999999999999999976 89
Q ss_pred eEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEE
Q 002801 786 LHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLV 865 (879)
Q Consensus 786 ~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~ 865 (879)
+.++..|...|+++..+|+=.++.+|+.||.|+.=|+..... ...-|... .+|..+..+.+.. -+-
T Consensus 248 l~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~-~tlick~d------------aPv~~l~~~~~~~-~~W 313 (735)
T KOG0308|consen 248 LATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAK-STLICKED------------APVLKLHLHEHDN-SVW 313 (735)
T ss_pred eeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchh-heEeecCC------------CchhhhhhccccC-Cce
Confidence 999999999999999999989999999999999999987521 11222222 2344444443333 345
Q ss_pred EEeCCCcEEEEE
Q 002801 866 AANSSGNIKILE 877 (879)
Q Consensus 866 s~~~Dg~I~vw~ 877 (879)
++..|+.|+-|.
T Consensus 314 vtTtds~I~rW~ 325 (735)
T KOG0308|consen 314 VTTTDSSIKRWK 325 (735)
T ss_pred eeeccccceecC
Confidence 556666777664
No 479
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.93 E-value=1.8e-25 Score=238.96 Aligned_cols=194 Identities=15% Similarity=0.212 Sum_probs=150.0
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCC
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlK 109 (879)
..+|++++..++ .+.+ ....|++|||++|++|.+++. .....+++..++.++.|++.||.|||+ .||+|+|||
T Consensus 65 ~~~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~ 141 (269)
T cd08528 65 QLRHPNIVRYYK-TFLE--NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLT 141 (269)
T ss_pred cCCCCCeeeEEe-eEcc--CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCC
Confidence 356777777666 4432 446899999999999998872 344568999999999999999999996 789999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||.+.......
T Consensus 142 ~~nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------------- 168 (269)
T cd08528 142 PNNIMLGEDDKVTITDFGLAKQKQPES----------------------------------------------------- 168 (269)
T ss_pred HHHEEECCCCcEEEecccceeeccccc-----------------------------------------------------
Confidence 999999999999999999986532110
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 169 --------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~ 210 (269)
T cd08528 169 --------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQ 210 (269)
T ss_pred --------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCC
Confidence 0012367888999999998889999999999999999998
Q ss_pred -CCCCChhhHhHHhhhcccCCCch-hhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||........ ...+......+. ....++.+.+++.+||..||++||++.|+..+
T Consensus 211 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 211 PPFYSTNMLSL-ATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred CcccccCHHHH-HHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 7654433322 222222322222 22456789999999999999999999998753
No 480
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.93 E-value=6.9e-26 Score=244.18 Aligned_cols=221 Identities=19% Similarity=0.178 Sum_probs=176.7
Q ss_pred ccccccc-----ccCCCCCcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCCh
Q 002801 7 RGERFGV-----RGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 81 (879)
Q Consensus 7 ~~~~~~~-----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~ 81 (879)
-|++++| +.|..++..-....+......-+|++++...+ +|.++ ..+||||+++-|.|++||+.+...|+.
T Consensus 415 kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIG-v~~e~---P~WivmEL~~~GELr~yLq~nk~sL~l 490 (974)
T KOG4257|consen 415 KGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIG-VCVEQ---PMWIVMELAPLGELREYLQQNKDSLPL 490 (974)
T ss_pred cCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheee-eeecc---ceeEEEecccchhHHHHHHhccccchH
Confidence 4666655 34444444222223444555678888888777 88754 479999999999999999888888999
Q ss_pred hHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhh
Q 002801 82 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (879)
Q Consensus 82 ~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (879)
.....++.||+.||.||||..+|||||-..|||+....-||++|||+++-.+.+..-..
T Consensus 491 ~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYka--------------------- 549 (974)
T KOG4257|consen 491 RTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKA--------------------- 549 (974)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhc---------------------
Confidence 99999999999999999999999999999999999999999999999987644322100
Q ss_pred hhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecc
Q 002801 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (879)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (879)
+..-=..-||||
T Consensus 550 --------------------------------------------------------------------S~~kLPIKWmaP 561 (974)
T KOG4257|consen 550 --------------------------------------------------------------------SRGKLPIKWMAP 561 (974)
T ss_pred --------------------------------------------------------------------cccccceeecCc
Confidence 000002349999
Q ss_pred ccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 242 EELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 242 E~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
|.+.-..++.+||||-|||.+||+|. ||..-.+. ..+..+..+...|.+..++|.+..|+.+||.++|.+||.+.
T Consensus 562 ESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs-DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrft 640 (974)
T KOG4257|consen 562 ESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS-DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFT 640 (974)
T ss_pred cccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc-ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHH
Confidence 99999999999999999999999998 99766554 45556677778888889999999999999999999999999
Q ss_pred HHhh
Q 002801 318 ELLQ 321 (879)
Q Consensus 318 evl~ 321 (879)
|+..
T Consensus 641 ei~~ 644 (974)
T KOG4257|consen 641 EIKA 644 (974)
T ss_pred HHHH
Confidence 8754
No 481
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.92 E-value=1.6e-23 Score=227.07 Aligned_cols=320 Identities=16% Similarity=0.257 Sum_probs=252.4
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCC----------C---------CCEEEEEEcCCCCEEEEEeCCCcEEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNS----------S---------NLVCSLSFDRDGELFAAAGVNKKIKV 594 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h----------~---------~~V~~l~fspdg~~lat~~~dg~I~i 594 (879)
+.++.|..+|+|++++..++....++...+..+. . -..-++.|++..+.+.+.-.|..|+|
T Consensus 271 r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYv 350 (1080)
T KOG1408|consen 271 RLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYV 350 (1080)
T ss_pred ceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEE
Confidence 4558889999999999998887777654332221 1 12346789998889998999999999
Q ss_pred EecCcccCcCcccccceEEeccCCCeeEEEEeCCC----------CCeEEEeeCCCcEEEEEcCCC---eEEEE------
Q 002801 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYI----------KSQIASSNFEGVVQVWDVSRS---QVLTE------ 655 (879)
Q Consensus 595 wd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----------~~~l~s~~~dg~V~vwd~~~~---~~~~~------ 655 (879)
||+........ .-..+.|...|+.+.--|++ ...+++++.||+|++||+..+ +..+.
T Consensus 351 WDvrD~~kvgk----~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~ 426 (1080)
T KOG1408|consen 351 WDVRDVNKVGK----CSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSAN 426 (1080)
T ss_pred Eeccccccccc----eeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhh
Confidence 99987432221 12234566777777655521 356899999999999998642 11000
Q ss_pred -----ec-----------------------cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceE
Q 002801 656 -----MR-----------------------EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVC 706 (879)
Q Consensus 656 -----~~-----------------------~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~ 706 (879)
+. ...-.+.+++.+| ++.+||+|..-|.++|||+..-.....+. |.+.|.
T Consensus 427 l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp-~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEil 505 (1080)
T KOG1408|consen 427 LSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSP-DGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEIL 505 (1080)
T ss_pred hhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECC-CcceecccCccCceEEEEehhhhhhhheecccceeE
Confidence 00 0223589999999 99999999999999999999887777776 567799
Q ss_pred EEEeeCC--CCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CC--------------------------
Q 002801 707 CVQFPLD--SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DA-------------------------- 757 (879)
Q Consensus 707 ~v~~~p~--~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~-------------------------- 757 (879)
|+.|+-. ..++||+++.|..|++||+...-.++.++.+|...|++|+|. +|
T Consensus 506 cLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~ 585 (1080)
T KOG1408|consen 506 CLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGR 585 (1080)
T ss_pred EEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCce
Confidence 9999743 246899999999999999988776788999999999999996 33
Q ss_pred -----------------------CEEEEEEcCCcEEEEecCCCcccccCCceEEEeC---CCCcEEEEEEecCCCEEEEE
Q 002801 758 -----------------------TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTG---HTNVKNFVGLSVWDGYVATG 811 (879)
Q Consensus 758 -----------------------~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~---h~~~v~~v~~sp~~~~lasg 811 (879)
+++++++.|..|+|||+.++ +..++|+| |.+....|.+.|.|-||||.
T Consensus 586 ~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sg------Kq~k~FKgs~~~eG~lIKv~lDPSgiY~atS 659 (1080)
T KOG1408|consen 586 LFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESG------KQVKSFKGSRDHEGDLIKVILDPSGIYLATS 659 (1080)
T ss_pred eccccccccccceEEEeeeCCCcceEEEEecccceEEEecccc------ceeeeecccccCCCceEEEEECCCccEEEEe
Confidence 14688999999999999998 56677764 55667788999999999999
Q ss_pred eCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 812 SETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 812 s~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
..|.++.+||..+++.+... .+|+..|+.+.|.+|.. .|++++.||.|-||.+
T Consensus 660 csdktl~~~Df~sgEcvA~m-------------~GHsE~VTG~kF~nDCk-HlISvsgDgCIFvW~l 712 (1080)
T KOG1408|consen 660 CSDKTLCFVDFVSGECVAQM-------------TGHSEAVTGVKFLNDCK-HLISVSGDGCIFVWKL 712 (1080)
T ss_pred ecCCceEEEEeccchhhhhh-------------cCcchheeeeeecccch-hheeecCCceEEEEEC
Confidence 99999999999998877654 47899999999999999 9999999999999986
No 482
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.92 E-value=1e-25 Score=244.13 Aligned_cols=199 Identities=14% Similarity=0.117 Sum_probs=141.0
Q ss_pred cccccCCCCCCccccccc--ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 35 GDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~--~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
..|++++..++ .+.... ....|++|+++ ..++.+.++.. ...++..++.|+.||+.||+|||++||+||||||+|
T Consensus 80 ~~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~N 156 (294)
T PHA02882 80 IDHLGIPKYYG-CGSFKRCRMYYRFILLEKL-VENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPEN 156 (294)
T ss_pred CCCCCCCcEEE-eeeEecCCceEEEEEEehh-ccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 45666666554 222221 12347778877 34666666443 346888999999999999999999999999999999
Q ss_pred eeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccc
Q 002801 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (879)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (879)
||++..+.++|+|||+++.+.........
T Consensus 157 ill~~~~~~~l~DFGla~~~~~~~~~~~~--------------------------------------------------- 185 (294)
T PHA02882 157 IMVDGNNRGYIIDYGIASHFIIHGKHIEY--------------------------------------------------- 185 (294)
T ss_pred EEEcCCCcEEEEEcCCceeeccCCccccc---------------------------------------------------
Confidence 99999999999999999764221000000
Q ss_pred cCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CC
Q 002801 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (879)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf 269 (879)
.........||+.|+|||+..+..++.++|||||||+||||++ ||
T Consensus 186 --------------------------------~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~ 233 (294)
T PHA02882 186 --------------------------------SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPW 233 (294)
T ss_pred --------------------------------ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 0000122468999999999999999999999999999999998 88
Q ss_pred CCChhhHhHH--------hhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 270 STGEEKTRTM--------SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 270 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
.......... ..+..... .....++.+.+++..|+..+|.+||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 234 KGFGHNGNLIHAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CccccchHHHHHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 6542222111 12221111 12334567889999999999999999999875
No 483
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=6.2e-24 Score=243.07 Aligned_cols=279 Identities=19% Similarity=0.237 Sum_probs=221.6
Q ss_pred eeccc--ccCceEEEeecCcE-EE---EE-ec--cccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcc----cC
Q 002801 536 WINPF--LEGLCKYLSFSKLR-VK---AD-LN--QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI----IN 602 (879)
Q Consensus 536 ~~~~~--~d~~i~~w~~~~~~-~~---~~-l~--~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~----~~ 602 (879)
+++|. .|+.+.+|+....- .. .. +. -..+..|.+.|+|+.|+|||++||+|+.|+.|.||+.... ..
T Consensus 28 ~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~f 107 (942)
T KOG0973|consen 28 FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVF 107 (942)
T ss_pred EecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccc
Confidence 36666 78899999765421 11 01 11 1345689999999999999999999999999999998830 00
Q ss_pred -------cCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCE
Q 002801 603 -------ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675 (879)
Q Consensus 603 -------~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~ 675 (879)
.............|.+.|..++|+| ++.++++++.|++|.||+..+.+.+..+++|...|-.+.|.| -|++
T Consensus 108 gs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP-~Gky 185 (942)
T KOG0973|consen 108 GSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDP-IGKY 185 (942)
T ss_pred cccccccccceeeEEEEEecCCCccceeccCC-CccEEEEecccceEEEEccccceeeeeeecccccccceEECC-ccCe
Confidence 0111112333456999999999999 599999999999999999999999999999999999999999 8999
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEec-------CCceEEEEeeCCCCCEEEEEeC----CCeEEEEEcCCCceeeEEEcc
Q 002801 676 LASGSDDGSVKLWSINQGVSIGTIKT-------KANVCCVQFPLDSGRSLAFGSA----DHRIYYYDLRNSKIPLCTLIG 744 (879)
Q Consensus 676 lasgs~Dg~V~iwd~~~~~~i~~~~~-------~~~v~~v~~~p~~~~~l~tgs~----d~~I~iwDl~~~~~~~~~~~~ 744 (879)
||+=++|++|+||.+......+++.. ..-...+.|+|+ |++|++..+ -.++.|.+-.+.+. -..+.|
T Consensus 186 ~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPD-G~~las~nA~n~~~~~~~IieR~tWk~-~~~LvG 263 (942)
T KOG0973|consen 186 FASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPD-GHHLASPNAVNGGKSTIAIIERGTWKV-DKDLVG 263 (942)
T ss_pred eeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCC-cCeecchhhccCCcceeEEEecCCcee-eeeeec
Confidence 99999999999999887666666652 223888999999 899998754 33788888876663 677889
Q ss_pred CCCCEEEEEEc------CCC------------EEEEEEcCCcEEEEecCCCcccccCCceEEEe-CCCCcEEEEEEecCC
Q 002801 745 HNKTVSYVKFV------DAT------------TLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT-GHTNVKNFVGLSVWD 805 (879)
Q Consensus 745 h~~~V~~v~fs------~~~------------~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~ 805 (879)
|.+++.+++|+ +.. .+|+||.|++|-||..... +|+.... --...|..++|+|||
T Consensus 264 H~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~------RPl~vi~~lf~~SI~DmsWspdG 337 (942)
T KOG0973|consen 264 HSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP------RPLFVIHNLFNKSIVDMSWSPDG 337 (942)
T ss_pred CCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC------CchhhhhhhhcCceeeeeEcCCC
Confidence 99999999994 122 6789999999999999765 4443322 123469999999999
Q ss_pred CEEEEEeCCCcEEEEecCC
Q 002801 806 GYVATGSETNEVFVYHKAF 824 (879)
Q Consensus 806 ~~lasgs~Dg~v~vw~~~~ 824 (879)
-.|..||.||+|.+.+++.
T Consensus 338 ~~LfacS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 338 FSLFACSLDGTVALIHFEE 356 (942)
T ss_pred CeEEEEecCCeEEEEEcch
Confidence 9999999999999999863
No 484
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-27 Score=232.88 Aligned_cols=211 Identities=18% Similarity=0.186 Sum_probs=163.1
Q ss_pred ccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC----CCCCCChhHHHHHHHHHHHHHHh
Q 002801 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYA 97 (879)
Q Consensus 22 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~----~~~~l~~~~~~~i~~qi~~~l~~ 97 (879)
+|+.|.+.+ ....+-+++|.+|+ ++.. +.+.+|.||++ ..||..+.+. ....+++.-.-+|..-.++||+|
T Consensus 108 rll~e~d~~-mks~~cp~IVkfyG-a~F~--EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~y 182 (361)
T KOG1006|consen 108 RLLMEHDTV-MKSSNCPNIVKFYG-ALFS--EGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDY 182 (361)
T ss_pred HHHHHHHHH-HhhcCCcHHHHHhh-hhhc--CCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHH
Confidence 344454433 33457888888888 5543 34679999999 6788765421 23468999999999999999999
Q ss_pred hhh-cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccC
Q 002801 98 AHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (879)
Q Consensus 98 lHs-~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (879)
|-. ..|||||+||+||||+..|.||+||||+|-++...
T Consensus 183 LK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S----------------------------------------- 221 (361)
T KOG1006|consen 183 LKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS----------------------------------------- 221 (361)
T ss_pred HHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH-----------------------------------------
Confidence 986 48999999999999999999999999999664111
Q ss_pred CCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC--CCCCccCc
Q 002801 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASD 254 (879)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sD 254 (879)
...+.-.|-..|||||.+.. ..|+.+||
T Consensus 222 --------------------------------------------------iAkT~daGCrpYmAPERi~p~~~gyDiRSD 251 (361)
T KOG1006|consen 222 --------------------------------------------------IAKTVDAGCRPYMAPERIDPSDKGYDIRSD 251 (361)
T ss_pred --------------------------------------------------HHhhhccCCccccChhccCCccCCcchhhh
Confidence 01234578889999999964 34999999
Q ss_pred chhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchh-----hccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 255 IwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
+||||++|||+.| ||..+.........+..+..|... ...+..+..+|.-||.+|-+.||...+++.+||++
T Consensus 252 vWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr 331 (361)
T KOG1006|consen 252 VWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYR 331 (361)
T ss_pred hhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhh
Confidence 9999999999999 887777665555555554443222 23567889999999999999999999999999997
Q ss_pred CC
Q 002801 327 EP 328 (879)
Q Consensus 327 ~~ 328 (879)
..
T Consensus 332 ~y 333 (361)
T KOG1006|consen 332 MY 333 (361)
T ss_pred hh
Confidence 54
No 485
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=4.1e-26 Score=218.50 Aligned_cols=197 Identities=15% Similarity=0.228 Sum_probs=155.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
.++|++..+. +..|.....+-++.||+.+.+.+++. ..|+..+++.++.|++.||+|+||+||+|||+||.|+||
T Consensus 91 gg~NIi~L~D-iV~Dp~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmI 165 (338)
T KOG0668|consen 91 GGPNIIKLLD-IVKDPESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMI 165 (338)
T ss_pred CCCCeeehhh-hhcCccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeee
Confidence 5889999888 66677777889999999999998876 457899999999999999999999999999999999999
Q ss_pred ccC-CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 116 SSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 116 ~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
+.. ..++++|+|+|-..-..
T Consensus 166 dh~~rkLrlIDWGLAEFYHp~----------------------------------------------------------- 186 (338)
T KOG0668|consen 166 DHELRKLRLIDWGLAEFYHPG----------------------------------------------------------- 186 (338)
T ss_pred chhhceeeeeecchHhhcCCC-----------------------------------------------------------
Confidence 954 56999999999654111
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc---CCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~---pf~ 270 (879)
. .....+-+..|.-||.+..-+ |+.+-|+|||||+|.+|+. ||+
T Consensus 187 --------~------------------------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFF 234 (338)
T KOG0668|consen 187 --------K------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 234 (338)
T ss_pred --------c------------------------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCccc
Confidence 0 012235577899999998755 8999999999999999998 998
Q ss_pred CChhhHhHHhhhcc---------------cCCCchh---------------------hccChhhHHHHHHhcCCCCCCCC
Q 002801 271 TGEEKTRTMSSLRH---------------RVLPPQL---------------------LLKFPKEASFCLWLLHPEPSGRP 314 (879)
Q Consensus 271 ~~~~~~~~~~~~~~---------------~~~~~~~---------------------~~~~~~~~~li~~~L~~dP~~Rp 314 (879)
.+.......-.+.. -.++|.+ .-.+|++.+|+.++|..|..+|+
T Consensus 235 hG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRl 314 (338)
T KOG0668|consen 235 HGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERL 314 (338)
T ss_pred CCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhcccccc
Confidence 77544433211110 0111111 11357889999999999999999
Q ss_pred CHHHHhhcccccCC
Q 002801 315 KMGELLQSEFLNEP 328 (879)
Q Consensus 315 t~~evl~hp~~~~~ 328 (879)
|+.|++.||||...
T Consensus 315 TakEam~HpyF~~~ 328 (338)
T KOG0668|consen 315 TAKEAMAHPYFAPV 328 (338)
T ss_pred chHHHhcCchHHHH
Confidence 99999999999754
No 486
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=2.7e-24 Score=206.96 Aligned_cols=247 Identities=20% Similarity=0.328 Sum_probs=197.3
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCC---eEEEEeccCCCcEEEEEEe-cCCCCEEEEEeCCCcEEEEeC
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDFS-SADPTLLASGSDDGSVKLWSI 690 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~---~~~~~~~~h~~~v~sv~~s-p~~~~~lasgs~Dg~V~iwd~ 690 (879)
.|...|.++...-+ +..|++++.|++|+|+.++.. +.+.++.+|.++||.++|. |.-|++||+++.||.|.||.-
T Consensus 9 ~H~D~IHda~lDyy-gkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 9 QHEDMIHDAQLDYY-GKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhHhhhhhh-cceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 46667777766655 899999999999999999654 5678899999999999994 556899999999999999998
Q ss_pred CCCceEEEE---ecCCceEEEEeeCCC-CCEEEEEeCCCeEEEEEcCCCc--eeeEEEccCCCCEEEEEEc----CC---
Q 002801 691 NQGVSIGTI---KTKANVCCVQFPLDS-GRSLAFGSADHRIYYYDLRNSK--IPLCTLIGHNKTVSYVKFV----DA--- 757 (879)
Q Consensus 691 ~~~~~i~~~---~~~~~v~~v~~~p~~-~~~l~tgs~d~~I~iwDl~~~~--~~~~~~~~h~~~V~~v~fs----~~--- 757 (879)
.++.--+.. .+.+.|++|+|-|.. |-.|++++.||.|.+.+.+... ..-.....|.-.|++++|. +|
T Consensus 88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~ 167 (299)
T KOG1332|consen 88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLV 167 (299)
T ss_pred CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcccc
Confidence 877322222 246789999999873 5678999999999999988752 2234566899999999996 34
Q ss_pred --------CEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCC----CEEEEEeCCCcEEEEecCCC
Q 002801 758 --------TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD----GYVATGSETNEVFVYHKAFP 825 (879)
Q Consensus 758 --------~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~----~~lasgs~Dg~v~vw~~~~~ 825 (879)
..|+||+-|+.|+||+..+... ..-+++.+|+..|..|+|.|.- .+||+||.||+|.||-....
T Consensus 168 ~~~~~~~~krlvSgGcDn~VkiW~~~~~~w----~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e 243 (299)
T KOG1332|consen 168 DQGPAAKVKRLVSGGCDNLVKIWKFDSDSW----KLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEE 243 (299)
T ss_pred ccCcccccceeeccCCccceeeeecCCcch----hhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCc
Confidence 5699999999999999998632 3445689999999999999974 38999999999999987622
Q ss_pred CCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 826 MPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
. . +........-...|..+.|+..|. +|+.++.|..|.+|.
T Consensus 244 ~--e--------~wk~tll~~f~~~~w~vSWS~sGn-~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 244 Y--E--------PWKKTLLEEFPDVVWRVSWSLSGN-ILAVSGGDNKVTLWK 284 (299)
T ss_pred c--C--------cccccccccCCcceEEEEEecccc-EEEEecCCcEEEEEE
Confidence 1 1 111222223356799999999999 999999999999995
No 487
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=9.4e-26 Score=224.71 Aligned_cols=158 Identities=18% Similarity=0.204 Sum_probs=124.3
Q ss_pred cchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCccccccccc
Q 002801 66 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQN 145 (879)
Q Consensus 66 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~ 145 (879)
|+|.++++..+..+++.+++.|++||+.||.|||+++ ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 6899999765667999999999999999999999999 999999999999999 998865311
Q ss_pred ccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCC
Q 002801 146 METKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPF 225 (879)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 225 (879)
T Consensus 62 -------------------------------------------------------------------------------- 61 (176)
T smart00750 62 -------------------------------------------------------------------------------- 61 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCC------chhhccCh
Q 002801 226 PMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP------PQLLLKFP 296 (879)
Q Consensus 226 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 296 (879)
....||+.|||||++.+..++.++|||||||++|||++ ||............+.....+ +.......
T Consensus 62 ----~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (176)
T smart00750 62 ----EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSA 137 (176)
T ss_pred ----ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHh
Confidence 01157899999999999999999999999999999999 775443322222222221111 11112222
Q ss_pred --hhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 297 --KEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 297 --~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
.+.+++.+||..+|.+||++.|+++|+|+.
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 588999999999999999999999999875
No 488
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.92 E-value=9.3e-26 Score=253.67 Aligned_cols=206 Identities=15% Similarity=0.159 Sum_probs=161.3
Q ss_pred ecccccccCCCCCCcccc---cccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 32 LTHGDHLRNQGGLSGVCE---NEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~---~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
....+|+|++.+|+ ++. ......++||||||.|||.-++++. .+..+.|..+..|++.++.||.+||...+||||
T Consensus 70 ~~~~~hpnv~~fyg-~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRD 148 (953)
T KOG0587|consen 70 KKYSHHPNVATFYG-AFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRD 148 (953)
T ss_pred HhccCCCCcceEEE-EEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeec
Confidence 34567777777666 332 2345679999999999999999853 256799999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||-.||||+.++.||++|||++.++.....
T Consensus 149 ikG~NiLLT~e~~VKLvDFGvSaQldsT~g-------------------------------------------------- 178 (953)
T KOG0587|consen 149 IKGQNVLLTENAEVKLVDFGVSAQLDSTVG-------------------------------------------------- 178 (953)
T ss_pred ccCceEEEeccCcEEEeeeeeeeeeecccc--------------------------------------------------
Confidence 999999999999999999999977532200
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-----CCCccCcchhHHHHH
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCASDIYRLGVLL 262 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~sDIwSlGvil 262 (879)
+....+||+.|||||++.-. .|+..+|+||||++.
T Consensus 179 ----------------------------------------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITa 218 (953)
T KOG0587|consen 179 ----------------------------------------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITA 218 (953)
T ss_pred ----------------------------------------cccCcCCCcccccceeeecccCCCCCcccccchhhcccee
Confidence 22446999999999999632 378899999999999
Q ss_pred HHhhc--CCCCChhhHhHHhhhcccCCCc--hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 263 FELFC--PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 263 ~ell~--pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
.||-. |....+....++..+...+.|. .+...+.++.+||..||.+|-.+||++.++|+|||+...
T Consensus 219 IEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 219 IEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred ehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 99998 3334444444444333332221 123445678899999999999999999999999999843
No 489
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-25 Score=232.27 Aligned_cols=206 Identities=17% Similarity=0.219 Sum_probs=161.2
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc--CcccccCCCc
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--GIVVHNVRPS 111 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~--givHrDlKP~ 111 (879)
..+|+++|..|+....| ....+-|+|||+|.+|.-||+.. +.+++.+++.|+.||+.||.||.+. -|||-||||.
T Consensus 523 eLDHpRIVKlYDyfslD--tdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPg 599 (775)
T KOG1151|consen 523 ELDHPRIVKLYDYFSLD--TDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPG 599 (775)
T ss_pred ccCcceeeeeeeeeeec--cccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCc
Confidence 36899999988844333 33567899999999999999766 5789999999999999999999986 5999999999
Q ss_pred ceeec---cCCCeeeeecccccCCCCCCcc--cccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 112 CFVMS---SFNHVSFIESASCSDSGSDSHE--EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 112 NIll~---~~~~vkl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||||. ..|.+||+|||+++..+.++.. +++.
T Consensus 600 NILLv~GtacGeIKITDFGLSKIMdddSy~~vdGme-------------------------------------------- 635 (775)
T KOG1151|consen 600 NILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGME-------------------------------------------- 635 (775)
T ss_pred cEEEecCcccceeEeeecchhhhccCCccCccccee--------------------------------------------
Confidence 99994 5688999999999987665443 1110
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC--C--CCccCcchhHHHHH
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--P--VSCASDIYRLGVLL 262 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~--~~~~sDIwSlGvil 262 (879)
......||.||.+||++.-+ + .+.++||||+|||+
T Consensus 636 -----------------------------------------LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF 674 (775)
T KOG1151|consen 636 -----------------------------------------LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF 674 (775)
T ss_pred -----------------------------------------eecccCceeeecCcceeecCCCCCccccceeeEeeehhh
Confidence 01234899999999998643 2 79999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhh---hcc-cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 263 FELFC---PFSTGEEKTRTMSS---LRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|.++. ||.........+.. +.. .+-.|.-+-.++++.+||++||.+.-++|....++..||||..
T Consensus 675 yQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 675 YQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 99998 99655443333221 111 1222333456788999999999999999999999999999964
No 490
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.92 E-value=2.2e-24 Score=221.69 Aligned_cols=264 Identities=16% Similarity=0.238 Sum_probs=220.2
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
+-+.+|..|..|++|+..-.+ .+ ..+.|.|..++|++++|+++++++++++.|+.+++|+++...... ..
T Consensus 188 dtlatgg~Dr~Ik~W~v~~~k--~~-~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~-------TL 257 (459)
T KOG0288|consen 188 DTLATGGSDRIIKLWNVLGEK--SE-LISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRH-------TL 257 (459)
T ss_pred chhhhcchhhhhhhhhcccch--hh-hhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhh-------hh
Confidence 456888999999999877655 12 236677888999999999999999999999999999998632211 11
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
-+|..+|+++.|... ...+++|++|.+|++||+....+.+++- ....++.|..+ +..+++|-.|++|++||+++.
T Consensus 258 sGHtdkVt~ak~~~~-~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~---~~~~~SgH~DkkvRfwD~Rs~ 332 (459)
T KOG0288|consen 258 SGHTDKVTAAKFKLS-HSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS---ISDVISGHFDKKVRFWDIRSA 332 (459)
T ss_pred cccccceeeehhhcc-ccceeeccccchhhhhhhhhhheecccc-ccccccceEec---ceeeeecccccceEEEeccCC
Confidence 248999999999764 4449999999999999999988877763 44567777765 467999999999999999999
Q ss_pred ceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccC----CCCEEEEEEc-CCCEEEEEEcCCc
Q 002801 694 VSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH----NKTVSYVKFV-DATTLVSASTDNT 768 (879)
Q Consensus 694 ~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h----~~~V~~v~fs-~~~~l~s~s~D~~ 768 (879)
.+......++.|+++..+++ +..+++++.|.++.+.|+|+... ...+.+. ..-++.+.|+ ++.|+++||.||.
T Consensus 333 ~~~~sv~~gg~vtSl~ls~~-g~~lLsssRDdtl~viDlRt~eI-~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgs 410 (459)
T KOG0288|consen 333 DKTRSVPLGGRVTSLDLSMD-GLELLSSSRDDTLKVIDLRTKEI-RQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGS 410 (459)
T ss_pred ceeeEeecCcceeeEeeccC-CeEEeeecCCCceeeeecccccE-EEEeeccccccccccceeEECCCCceeeeccCCCc
Confidence 99999999999999999999 88888999999999999999873 4444321 2348999999 9999999999999
Q ss_pred EEEEecCCCcccccCCceEEEeCCCC--cEEEEEEecCCCEEEEEeCCCcEEEE
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTN--VKNFVGLSVWDGYVATGSETNEVFVY 820 (879)
Q Consensus 769 i~lwd~~~~~~~~~~~~~~~~~~h~~--~v~~v~~sp~~~~lasgs~Dg~v~vw 820 (879)
|+||++.++ ++...++..+. .|++++|+|.|.++++++.++.+.+|
T Consensus 411 v~iW~v~tg------KlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 411 VYIWSVFTG------KLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred EEEEEccCc------eEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 999999998 55555554433 59999999999999999999999999
No 491
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.92 E-value=3.2e-25 Score=237.48 Aligned_cols=202 Identities=14% Similarity=0.088 Sum_probs=148.0
Q ss_pred eecccccccCCCCCCccccccc-c---cCceEEEEeeCCcchhhhhcC-----CCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA-A---IDPFVHAIEWGDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~-~---~~~~lv~e~~~g~sL~~~l~~-----~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ ++.... . ..++++++|+.+++|..++.. ....+++..++.++.||+.||+|||+.
T Consensus 54 ~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~ 132 (273)
T cd05074 54 CMKEFDHPNVIKLIG-VSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK 132 (273)
T ss_pred HHhcCCCCCcceEEE-EEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 455567888877766 443221 1 234788999999999887621 223578999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+||+++.++.+|++|||.++.........
T Consensus 133 ~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------------ 170 (273)
T cd05074 133 NFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYR------------------------------------------ 170 (273)
T ss_pred CEeecccchhhEEEcCCCCEEECcccccccccCCccee------------------------------------------
Confidence 99999999999999999999999999987532110000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
......+++.|++||.+.+..++.++|||||||+
T Consensus 171 ----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~i 204 (273)
T cd05074 171 ----------------------------------------------QGCASKLPVKWLALESLADNVYTTHSDVWAFGVT 204 (273)
T ss_pred ----------------------------------------------cCCCccCchhhcCHhHHhcCccchhhhhHHHHHH
Confidence 0001133567999999988889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+|||++ ||.... .......+............+..+.+++.+||..+|.+||++.++++.
T Consensus 205 l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 205 MWEIMTRGQTPYAGVE-NSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred HHHHhhCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999987 554332 222233232222222233456788999999999999999999999863
No 492
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.92 E-value=2.1e-23 Score=215.47 Aligned_cols=269 Identities=19% Similarity=0.250 Sum_probs=230.7
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
+-.++|..|..+-++|....++...++ ||.-.|+++.|+|+...+++++.|..|+||...... .+...
T Consensus 232 ~~ilTGG~d~~av~~d~~s~q~l~~~~-----Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s-------~~~~~ 299 (506)
T KOG0289|consen 232 SKILTGGEDKTAVLFDKPSNQILATLK-----GHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS-------EPTSS 299 (506)
T ss_pred CcceecCCCCceEEEecchhhhhhhcc-----CcceEEEEEEeccchhheeecCCcceEEeecccccc-------Ccccc
Confidence 455889999999999999988886654 899999999999999999999999999999876421 34455
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEecc--CCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE--HERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~--h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~ 691 (879)
..|.++|+.+..+|. +.+|++++.||+....|++++.++..... ..-.+++..|+| ||.+|++|..|+.|+|||+.
T Consensus 300 ~~h~~~V~~ls~h~t-geYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdlk 377 (506)
T KOG0289|consen 300 RPHEEPVTGLSLHPT-GEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDLK 377 (506)
T ss_pred ccccccceeeeeccC-CcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCCCceEEEEEcC
Confidence 679999999999995 99999999999999999999987765532 234599999999 99999999999999999999
Q ss_pred CCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEcc-CCCCEEEEEEc-CCCEEEEEEcCCc
Q 002801 692 QGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG-HNKTVSYVKFV-DATTLVSASTDNT 768 (879)
Q Consensus 692 ~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~-h~~~V~~v~fs-~~~~l~s~s~D~~ 768 (879)
++..+..|.. .++|..|+|+-+ |.+|+++..|+.|++||+|..+. +.++.. ....|.++.|. .|.+|+.++.|=+
T Consensus 378 s~~~~a~Fpght~~vk~i~FsEN-GY~Lat~add~~V~lwDLRKl~n-~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~ 455 (506)
T KOG0289|consen 378 SQTNVAKFPGHTGPVKAISFSEN-GYWLATAADDGSVKLWDLRKLKN-FKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQ 455 (506)
T ss_pred CccccccCCCCCCceeEEEeccC-ceEEEEEecCCeEEEEEehhhcc-cceeeccccccceeEEEcCCCCeEEeecceeE
Confidence 9998888875 577999999998 99999999999999999999874 555553 34579999998 9999999988877
Q ss_pred EEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEec
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 769 i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~ 822 (879)
|++++-.+... .++..+..|.+..+.|.|....+++++||.|..++++.+
T Consensus 456 Vy~~~k~~k~W----~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 456 VYICKKKTKSW----TEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred EEEEecccccc----eeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 77777555433 677888889989999999999999999999999988854
No 493
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.92 E-value=2.4e-25 Score=233.10 Aligned_cols=221 Identities=20% Similarity=0.238 Sum_probs=165.3
Q ss_pred ccccccccCCCC-----CcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChh
Q 002801 8 GERFGVRGDDSN-----DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 8 ~~~~~~~~~~~~-----~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~ 82 (879)
|+.++++-.... ...|+.|... +...+|++++..++ .+.. ....+++|||+.+++|.+++.... .+++.
T Consensus 14 ~~~~~~k~~~~~~~~~~~~~~~~e~~~--~~~l~~~~i~~~~~-~~~~--~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~ 87 (244)
T smart00220 14 GKLVAIKVIKKEKIKKKRERILREISI--LKKLKHPNIVRLYD-VFED--EDKLYLVMEYCDGGDLFDLLKKRG-RLSED 87 (244)
T ss_pred CcEEEEEEecccccccHHHHHHHHHHH--HHhCCCCcHHHHHh-heee--CCEEEEEEeCCCCCCHHHHHHhcc-CCCHH
Confidence 455555543322 2344444332 23336777766555 3433 246799999999999999996543 38999
Q ss_pred HHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhh
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
.+..++.+++.+|.|||+.||+|+||+|+||+++.++.++++|||.+.......
T Consensus 88 ~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-------------------------- 141 (244)
T smart00220 88 EARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-------------------------- 141 (244)
T ss_pred HHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--------------------------
Confidence 999999999999999999999999999999999999999999999986532110
Q ss_pred hhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccc
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
......++..|+|||
T Consensus 142 -----------------------------------------------------------------~~~~~~~~~~~~~pE 156 (244)
T smart00220 142 -----------------------------------------------------------------LLTTFVGTPEYMAPE 156 (244)
T ss_pred -----------------------------------------------------------------ccccccCCcCCCCHH
Confidence 001236688899999
Q ss_pred cccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhc--cChhhHHHHHHhcCCCCCCCCCHH
Q 002801 243 ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
.+.+..++.++||||||+++|+|++ ||............+........... ....+.+++.+||..+|++||++.
T Consensus 157 ~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~ 236 (244)
T smart00220 157 VLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAE 236 (244)
T ss_pred HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHH
Confidence 9988889999999999999999999 77553444444444444333322222 567889999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
++++||||
T Consensus 237 ~~~~~~~~ 244 (244)
T smart00220 237 EALQHPFF 244 (244)
T ss_pred HHhhCCCC
Confidence 99999997
No 494
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-25 Score=248.79 Aligned_cols=177 Identities=19% Similarity=0.215 Sum_probs=138.4
Q ss_pred cccccccccCCCCC---cccccccCceeecccccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCCC--C
Q 002801 7 RGERFGVRGDDSND---FELRKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPK--R 77 (879)
Q Consensus 7 ~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~--~ 77 (879)
.|+.++++--..-. .+-|-.++...+...+|+|+|..++ +.++.. ...+.++||||.||||+..|+++. .
T Consensus 37 tG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~-iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~ 115 (732)
T KOG4250|consen 37 TGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFD-IEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAY 115 (732)
T ss_pred cccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcc-cCCccccCcccccceEEEeecCCCcHHHHhcCccccc
Confidence 35556665432211 1112235555667788999999888 665555 567899999999999999996543 4
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeec--cCCC--eeeeecccccCCCCCCcccccccccccccCCCC
Q 002801 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS--SFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 153 (879)
Q Consensus 78 ~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~--~~~~--vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (879)
.|++.+.+.++..++.||.|||++|||||||||.||++- .+|+ -||+|||.|+..+..+
T Consensus 116 GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s----------------- 178 (732)
T KOG4250|consen 116 GLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS----------------- 178 (732)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC-----------------
Confidence 699999999999999999999999999999999999994 3343 6999999999864331
Q ss_pred CCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccc
Q 002801 154 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLM 233 (879)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 233 (879)
..++++
T Consensus 179 --------------------------------------------------------------------------~~~S~v 184 (732)
T KOG4250|consen 179 --------------------------------------------------------------------------LFTSLV 184 (732)
T ss_pred --------------------------------------------------------------------------eeeeec
Confidence 125579
Q ss_pred cccceeccccccC-CCCCccCcchhHHHHHHHhhc---CCCCChhh
Q 002801 234 ETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGEEK 275 (879)
Q Consensus 234 gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~---pf~~~~~~ 275 (879)
||..|.+||++.. ..|+..+|.|||||++||+.| ||.+....
T Consensus 185 GT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 185 GTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred CchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 9999999999984 779999999999999999999 77655443
No 495
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.92 E-value=1.3e-23 Score=226.45 Aligned_cols=287 Identities=21% Similarity=0.326 Sum_probs=214.9
Q ss_pred EEEEEcC---CCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcC
Q 002801 572 CSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648 (879)
Q Consensus 572 ~~l~fsp---dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~ 648 (879)
.++.|++ ...+||.+..||.|.+||....... .........+.|...|..+.|-| ....|++.+.|.++++||+.
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr-~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk 130 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFR-LEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVK 130 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcc-hhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeec
Confidence 4467765 3458999999999999998763322 11112234567999999999999 58899999999999999999
Q ss_pred CCeEEEE--eccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc--------------------eEE-------EE
Q 002801 649 RSQVLTE--MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV--------------------SIG-------TI 699 (879)
Q Consensus 649 ~~~~~~~--~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~--------------------~i~-------~~ 699 (879)
+++++.. +.+|+..|-+++|.|.+...|++|+.||.|.|||++-.. +.. ..
T Consensus 131 ~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~ 210 (720)
T KOG0321|consen 131 TSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKW 210 (720)
T ss_pred cceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccc
Confidence 9988766 889999999999999999999999999999999986321 110 11
Q ss_pred ecC-----CceEEEEeeCCCCCEEEEEeC-CCeEEEEEcCCCcee-----eE--EEccC---CCCEEEEEEc-CCCEEEE
Q 002801 700 KTK-----ANVCCVQFPLDSGRSLAFGSA-DHRIYYYDLRNSKIP-----LC--TLIGH---NKTVSYVKFV-DATTLVS 762 (879)
Q Consensus 700 ~~~-----~~v~~v~~~p~~~~~l~tgs~-d~~I~iwDl~~~~~~-----~~--~~~~h---~~~V~~v~fs-~~~~l~s 762 (879)
..+ +.|+.+.| .| ...||+++. |+.|++||+|+...+ .. .+.-| .-.++++... .|.+|..
T Consensus 211 kA~s~ti~ssvTvv~f-kD-e~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~A 288 (720)
T KOG0321|consen 211 KAASNTIFSSVTVVLF-KD-ESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFA 288 (720)
T ss_pred ccccCceeeeeEEEEE-ec-cceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEE
Confidence 111 12444444 45 578888887 999999999986521 22 22223 1234444443 7788888
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEE--EEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCC
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFV--GLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLS 840 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v--~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~ 840 (879)
.+.|+.|.+|++..... .++..+.++.+.-..+ ..+|++.+|++|+.|..+++|.+.....-...
T Consensus 289 sCtD~sIy~ynm~s~s~----sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~--------- 355 (720)
T KOG0321|consen 289 SCTDNSIYFYNMRSLSI----SPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPAL--------- 355 (720)
T ss_pred EecCCcEEEEeccccCc----CchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhh---------
Confidence 88899999999998754 6778888776644443 58999999999999999999999875432221
Q ss_pred CCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 841 GPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 841 ~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
..+|...|.+|+|.|....-++||+.|-.++||++
T Consensus 356 ---l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l 390 (720)
T KOG0321|consen 356 ---LLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRL 390 (720)
T ss_pred ---hhCcceEEEEEeeccccCCCceeeccCcceEEEec
Confidence 25778889999999864334888899999999986
No 496
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1e-23 Score=227.74 Aligned_cols=339 Identities=14% Similarity=0.193 Sum_probs=253.5
Q ss_pred cccccCCCCceecccccCceEEEeecCcEEEEEec-cccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcC
Q 002801 526 EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN 604 (879)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~i~~w~~~~~~~~~~l~-~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~ 604 (879)
+.++-..+.++++|..||.|+.|+.....-..+-. ...+..|++.|+++...-+|+.|++|+.|.+|++|+......
T Consensus 30 Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~-- 107 (735)
T KOG0308|consen 30 LQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNT-- 107 (735)
T ss_pred ccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcc--
Confidence 33343345578999999999999877644332222 355678999999999999999999999999999999876420
Q ss_pred cccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCC--eEEEE--------ec-cCCCcEEEEEEecCCC
Q 002801 605 RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS--QVLTE--------MR-EHERRVWSIDFSSADP 673 (879)
Q Consensus 605 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~--~~~~~--------~~-~h~~~v~sv~~sp~~~ 673 (879)
.+....-.|..-|.|+++-..+...+|||+-|+.|.+||++++ +.+.. +. ++...|.+++.++ ++
T Consensus 108 ---~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~-t~ 183 (735)
T KOG0308|consen 108 ---FCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQ-TG 183 (735)
T ss_pred ---hhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCC-cc
Confidence 1111223488899999994446889999999999999999977 23322 22 6888999999999 89
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEE
Q 002801 674 TLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYV 752 (879)
Q Consensus 674 ~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v 752 (879)
..+++|+..+.+++||.++.+.+..+.. ..+|.++-.+++ |..++++|.||+|++||++..++ +.++..|+..|.++
T Consensus 184 t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dD-Gt~~ls~sSDgtIrlWdLgqQrC-l~T~~vH~e~VWaL 261 (735)
T KOG0308|consen 184 TIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDD-GTRLLSASSDGTIRLWDLGQQRC-LATYIVHKEGVWAL 261 (735)
T ss_pred eEEEecCcccceEEeccccccceeeeeccccceEEEEEcCC-CCeEeecCCCceEEeeeccccce-eeeEEeccCceEEE
Confidence 9999999999999999999988888874 577999999999 89999999999999999998884 89999999999999
Q ss_pred EEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceec
Q 002801 753 KFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSF 831 (879)
Q Consensus 753 ~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~ 831 (879)
.-+ +=..+.+|+.|+.|..=|+++.. .+...+ ....+|..+..+.+.+-+-.++.|+.|+-|-......+...
T Consensus 262 ~~~~sf~~vYsG~rd~~i~~Tdl~n~~-----~~tlic-k~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s 335 (735)
T KOG0308|consen 262 QSSPSFTHVYSGGRDGNIYRTDLRNPA-----KSTLIC-KEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVS 335 (735)
T ss_pred eeCCCcceEEecCCCCcEEecccCCch-----hheEee-cCCCchhhhhhccccCCceeeeccccceecCCccccccccC
Confidence 888 77899999999999999999862 222322 34556777777766665677888999999976543322211
Q ss_pred ---ccCCCCC---CCC----CCC-CCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 832 ---NFNHADP---LSG----PET-DDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 832 ---~~~~~~~---~~~----~~~-~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
.+...+. ... +.. ...+..+..-+.-.|.+ .++|=..+|.+.+||++
T Consensus 336 ~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkR-hVlTkDa~gnv~lwDIl 393 (735)
T KOG0308|consen 336 GDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKR-HVLTKDAKGNVALWDIL 393 (735)
T ss_pred CCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcc-eEeeecCCCCEEEEEee
Confidence 0000000 000 000 11122233333445666 89999999999999985
No 497
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=3.9e-24 Score=205.87 Aligned_cols=252 Identities=20% Similarity=0.301 Sum_probs=201.0
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEE-eCCCCCeEEEeeCCCcEEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW-NSYIKSQIASSNFEGVVQV 644 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~~l~s~~~dg~V~v 644 (879)
.|.+.|.++..+--|+.||||+.|++||||....... ........+|.+++..++| +|.-+++|||+++||.|.|
T Consensus 9 ~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~----s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIi 84 (299)
T KOG1332|consen 9 QHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQ----SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVII 84 (299)
T ss_pred hhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCC----ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEE
Confidence 7889999999999999999999999999999876322 1112223469999999999 5666999999999999999
Q ss_pred EEcCCCeE--EEEeccCCCcEEEEEEecCC-CCEEEEEeCCCcEEEEeCCCC-c-eEEE--EecCCceEEEEeeCCC--C
Q 002801 645 WDVSRSQV--LTEMREHERRVWSIDFSSAD-PTLLASGSDDGSVKLWSINQG-V-SIGT--IKTKANVCCVQFPLDS--G 715 (879)
Q Consensus 645 wd~~~~~~--~~~~~~h~~~v~sv~~sp~~-~~~lasgs~Dg~V~iwd~~~~-~-~i~~--~~~~~~v~~v~~~p~~--~ 715 (879)
|.-++++- ...+..|...|++|+|.|.+ +-+|++++.||.|.|.+.+.. . .... .-|.-.|++|+|.|.. |
T Consensus 85 Wke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g 164 (299)
T KOG1332|consen 85 WKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPG 164 (299)
T ss_pred EecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCc
Confidence 99888753 34456799999999999843 568999999999999998765 1 1112 2245679999999862 1
Q ss_pred -----------CEEEEEeCCCeEEEEEcCCCce-eeEEEccCCCCEEEEEEc-----CCCEEEEEEcCCcEEEEecCCCc
Q 002801 716 -----------RSLAFGSADHRIYYYDLRNSKI-PLCTLIGHNKTVSYVKFV-----DATTLVSASTDNTLKLWDLSMCT 778 (879)
Q Consensus 716 -----------~~l~tgs~d~~I~iwDl~~~~~-~~~~~~~h~~~V~~v~fs-----~~~~l~s~s~D~~i~lwd~~~~~ 778 (879)
+.|++|+.|..|+||+..+..- .-+++.+|...|..++|. .-.+|+|+|.||++.||-.+...
T Consensus 165 ~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~ 244 (299)
T KOG1332|consen 165 SLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEY 244 (299)
T ss_pred cccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCcc
Confidence 4599999999999999988652 234588999999999996 34689999999999999988543
Q ss_pred ccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCC
Q 002801 779 SRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF 824 (879)
Q Consensus 779 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~ 824 (879)
..+..+.+..| ...++.+.||+.|..|+.++.|+.|.+|.-..
T Consensus 245 e~wk~tll~~f---~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 245 EPWKKTLLEEF---PDVVWRVSWSLSGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred CcccccccccC---CcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence 43444455543 46799999999999999999999999996543
No 498
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1.9e-23 Score=233.57 Aligned_cols=245 Identities=16% Similarity=0.210 Sum_probs=199.7
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCC--------------------------------C------------
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR--------------------------------S------------ 650 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~--------------------------------~------------ 650 (879)
.|.+.|.++.|++ +|.+||+|+.||.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 5899999999999 599999999999999998744 0
Q ss_pred ----------------eEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCC
Q 002801 651 ----------------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDS 714 (879)
Q Consensus 651 ----------------~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~ 714 (879)
+++..|.+|.+.|.++.||. .++|+++|-|.+|+||++....|+++|.|..-|+||+|+|.+
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvD 421 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVD 421 (712)
T ss_pred CCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccC
Confidence 11344667999999999995 579999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEE----
Q 002801 715 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF---- 789 (879)
Q Consensus 715 ~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~---- 789 (879)
.+||++|+-|+.|+||++...+ +.....-..-|++++|. ||+..+.|+.+|.+++|++........ ..+..-
T Consensus 422 DryFiSGSLD~KvRiWsI~d~~--Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~-~~I~~~~~Kk 498 (712)
T KOG0283|consen 422 DRYFISGSLDGKVRLWSISDKK--VVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSD-FHIRLHNKKK 498 (712)
T ss_pred CCcEeecccccceEEeecCcCe--eEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEe-eeEeeccCcc
Confidence 9999999999999999998877 33343444889999999 999999999999999999988643210 011110
Q ss_pred eCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEe
Q 002801 790 TGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAAN 868 (879)
Q Consensus 790 ~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~ 868 (879)
..|. .|+.+.|.|... -|+..|.|..|+|||......+..++-.+. ...=....|+.||. .|++++
T Consensus 499 ~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n-----------~~SQ~~Asfs~Dgk-~IVs~s 565 (712)
T KOG0283|consen 499 KQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRN-----------TSSQISASFSSDGK-HIVSAS 565 (712)
T ss_pred ccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhccccc-----------CCcceeeeEccCCC-EEEEee
Confidence 0122 699999998644 577778899999999988888887762211 11234567889999 999999
Q ss_pred CCCcEEEEEe
Q 002801 869 SSGNIKILEM 878 (879)
Q Consensus 869 ~Dg~I~vw~l 878 (879)
.|..|+||++
T Consensus 566 eDs~VYiW~~ 575 (712)
T KOG0283|consen 566 EDSWVYIWKN 575 (712)
T ss_pred cCceEEEEeC
Confidence 9999999985
No 499
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.6e-26 Score=223.85 Aligned_cols=182 Identities=21% Similarity=0.279 Sum_probs=140.4
Q ss_pred CceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCC
Q 002801 55 DPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 134 (879)
Q Consensus 55 ~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~ 134 (879)
.+|++.|++ ..+|...|-.+ ..++.+.++-+++||++||.|||+.||.||||||.|.|++.+..+||||||+++..+.
T Consensus 131 EiYV~TELm-QSDLHKIIVSP-Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 131 ELYVLTELM-QSDLHKIIVSP-QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHHH-HhhhhheeccC-CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccch
Confidence 468888888 66888888555 6799999999999999999999999999999999999999999999999999987432
Q ss_pred CCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccc
Q 002801 135 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 214 (879)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 214 (879)
+...
T Consensus 209 d~~~---------------------------------------------------------------------------- 212 (449)
T KOG0664|consen 209 RDRL---------------------------------------------------------------------------- 212 (449)
T ss_pred hhhh----------------------------------------------------------------------------
Confidence 2110
Q ss_pred hhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc---CCCCChhh--------------H
Q 002801 215 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEK--------------T 276 (879)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~---pf~~~~~~--------------~ 276 (879)
.++..+-|.+|+|||+++|.. |+.+.||||.|||+.||+. -|...... .
T Consensus 213 -------------hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~ 279 (449)
T KOG0664|consen 213 -------------NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQ 279 (449)
T ss_pred -------------hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcH
Confidence 234457799999999999976 9999999999999999998 33222111 1
Q ss_pred hHH---------hhhcccCCCchhhc---------cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 277 RTM---------SSLRHRVLPPQLLL---------KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 277 ~~~---------~~~~~~~~~~~~~~---------~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
+.| ..++....+|.+.. .......++.++|..||.+|.+.++++.|+++.+
T Consensus 280 EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 280 EAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 111 22333333333321 1234568899999999999999999999999764
No 500
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=1.6e-22 Score=201.61 Aligned_cols=266 Identities=14% Similarity=0.225 Sum_probs=203.6
Q ss_pred EEEEeCCCcEEEEecCcccCcCccccc-----ceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEec
Q 002801 583 FAAAGVNKKIKVFECDAIINENRDIHY-----PVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR 657 (879)
Q Consensus 583 lat~~~dg~I~iwd~~~~~~~~~~~~~-----~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~ 657 (879)
|++|++...|.-|++........+... ......|.+.|++++.+ +.+++||+.|-+|+|||+.+...+..+-
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs---~~~~aSGssDetI~IYDm~k~~qlg~ll 80 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS---GPYVASGSSDETIHIYDMRKRKQLGILL 80 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec---ceeEeccCCCCcEEEEeccchhhhccee
Confidence 556777666666666542211111111 12234589999999986 7899999999999999999998888888
Q ss_pred cCCCcEEEEEEecCCCC--EEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCC
Q 002801 658 EHERRVWSIDFSSADPT--LLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRN 734 (879)
Q Consensus 658 ~h~~~v~sv~~sp~~~~--~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~ 734 (879)
.|.+.|+++.|.+ .-. .|++|++||.|.+|+......+.+++. .+.|+.++.||. +++.++.+.|+.++.||+-+
T Consensus 81 ~HagsitaL~F~~-~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS-~KLALsVg~D~~lr~WNLV~ 158 (362)
T KOG0294|consen 81 SHAGSITALKFYP-PLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPS-GKLALSVGGDQVLRTWNLVR 158 (362)
T ss_pred ccccceEEEEecC-CcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCC-CceEEEEcCCceeeeehhhc
Confidence 9999999999987 443 899999999999999999999999985 556999999999 89999999999999999988
Q ss_pred CceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeC
Q 002801 735 SKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSE 813 (879)
Q Consensus 735 ~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~ 813 (879)
++.....-..+ .-+.|.|+ .|.+++.++.+ .|-+|.+.+.. ....+. ....+.++-|- ++.+|++|++
T Consensus 159 Gr~a~v~~L~~--~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~------v~~~i~-~~~r~l~~~~l-~~~~L~vG~d 227 (362)
T KOG0294|consen 159 GRVAFVLNLKN--KATLVSWSPQGDHFVVSGRN-KIDIYQLDNAS------VFREIE-NPKRILCATFL-DGSELLVGGD 227 (362)
T ss_pred CccceeeccCC--cceeeEEcCCCCEEEEEecc-EEEEEecccHh------Hhhhhh-ccccceeeeec-CCceEEEecC
Confidence 87422221122 23459999 88888877765 58899988752 222221 11335555554 5779999999
Q ss_pred CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEE--eCCCCcEEEEEeCCCcEEEEEe
Q 002801 814 TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCW--RGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 814 Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~--~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
|+.|.+||-....+...+ .+|...|-++.+ +|++. +|+|+++||.|+|||+
T Consensus 228 ~~~i~~~D~ds~~~~~~~-------------~AH~~RVK~i~~~~~~~~~-~lvTaSSDG~I~vWd~ 280 (362)
T KOG0294|consen 228 NEWISLKDTDSDTPLTEF-------------LAHENRVKDIASYTNPEHE-YLVTASSDGFIKVWDI 280 (362)
T ss_pred CceEEEeccCCCccceee-------------ecchhheeeeEEEecCCce-EEEEeccCceEEEEEc
Confidence 999999999876655443 578888999984 46677 9999999999999996
Done!