BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002805
(879 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255563196|ref|XP_002522601.1| conserved hypothetical protein [Ricinus communis]
gi|223538077|gb|EEF39688.1| conserved hypothetical protein [Ricinus communis]
Length = 932
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 366/924 (39%), Positives = 523/924 (56%), Gaps = 86/924 (9%)
Query: 4 MERSQV--ETTSFCFSPHR---HLKSETYRALVQILSHCYDHSQI-----SAAQDSRPG- 52
M++ Q+ + T F PHR HLKS+TY LV+I+S CY+H + S +Q+ P
Sbjct: 1 MDKPQILPQKTPIHF-PHRPKPHLKSQTYTNLVRIISECYNHPHLCKIPPSISQELIPAY 59
Query: 53 ------------MCGSGELVGP-----NAAVVDNSLA--EKDKA-GDEDRWFGDAQIVLD 92
+ ELV P N +V N+L+ E KA G +D F D Q V+
Sbjct: 60 DSNEPREASARQVLEQSELVTPDGTDHNYSVAQNNLSTDENVKAIGLQDGGFSDTQAVIY 119
Query: 93 EIQDILQVEENGNLLKQ-ELAVCDGDYETGNFDEGLGQ-QRMLMDELEHILKGDVIFVHE 150
EI++I+ +EE+ N K+ + + DG +G D+ GQ Q++LMDELEH++KG VH+
Sbjct: 120 EIENIMGIEEDENTFKEKDTSDNDGSGGSGVDDKEFGQLQQVLMDELEHVMKGSEDVVHD 179
Query: 151 EDALVNDRQEHVDIQQIVNVESRSEAELQVDKGDSNLDVPKSFDSSVDRNMDSHASKPAE 210
+ + + E+R A DK ++ + + + SVD++MD +E
Sbjct: 180 NNC---------NFSTFLLDENRCGA----DKERASQNTCELIELSVDKSMDCKVLHISE 226
Query: 211 DSEERNSKLRTNSLEFENEMQQKEMEEEKLVHTNGIIGAHDHRAEDVEVEEGEISGHFEV 270
++EE+N RTN LE +EMQQKEME K V N + + ED ++EEGEI+G FEV
Sbjct: 227 NNEEKNPSPRTNLLEVSHEMQQKEMESGKSVCANDAADSSN-MIEDGKMEEGEIAGEFEV 285
Query: 271 DEVSIDMIIDNAVVSNEKKEDEEQVSKDVTDKTDFPCNEKCGGTEKFSDSTSVCLNAVDH 330
DE DM + ++ + E+ + Q+S++ DK FP N+K K D S+C+
Sbjct: 286 DERLDDMPLKDSALPLEQNK---QLSEEFVDKNKFPSNDKRKSDRK--DPGSLCMTVDMM 340
Query: 331 NASGGTVELQETVRNETQCKTKIFADGTATMAIDPDRYNSMP----------GVG-RNKR 379
N + + VRN+ CK K+ + +A +P+ Y G G + K+
Sbjct: 341 NVTDKKGIEAKDVRNQMACKRKVVVYEDSILAQEPNEYKKQKKGHETKERNKGSGDKEKK 400
Query: 380 KASRGEEGISSFSASLDDSTVQKEVVKQRVTQEQGITTKDKLDSGACNKRKRSALSKEKK 439
K + G I S ++S + + + Q T QGIT K+K DSG CNK+KR S+EKK
Sbjct: 401 KGNIGCPMICS-----NNSALSSKKLDQGATGSQGITCKEKQDSGLCNKKKRGPPSEEKK 455
Query: 440 AKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPL 499
KKK+K+RKKRA+KNR+LGV+RLKL KPK V +C HY++GRCQEG+KCKFSHDT+PL
Sbjct: 456 EKKKEKKRKKRAQKNRELGVKRLKLRPVEKPKPVVFCRHYIRGRCQEGEKCKFSHDTIPL 515
Query: 500 TKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDP 559
TKS K CCHFARNSC+KGD+CPFDH+LSKYPC N+ + G C+RGD+C+FSHKLP KE P
Sbjct: 516 TKS-KPCCHFARNSCLKGDDCPFDHELSKYPCTNYASTGSCSRGDDCMFSHKLPLKEDLP 574
Query: 560 PTPSTCTPEL-KPSPPLYASNLLKPLNNNKVSHQNVDALSNHGKVSSFKNIEQSVAKSIL 618
+ CTP+L PS P +ASN K L++ +SH A + G S K+ E++V K +L
Sbjct: 575 SASNVCTPDLNSPSLP-HASNSKKQLDSGGISHHTAKASPDTGGGLSRKDTERNVPKGVL 633
Query: 619 KPPALAPKGISYLFLGKSSFLEASNLGQGISSPKKSDSSKFANQTAQIASDSVQSRDETP 678
P L PKGIS+L GKSS +E+S+ SS +S+ K NQ Q A+ S ++ +E P
Sbjct: 634 GPHVLVPKGISFLSAGKSSVVESSHSTPRSSSLSRSEGFKVGNQRDQSAAGSNENSNEIP 693
Query: 679 RRIPVAT--KGVNFLSFGNRSLEDSSGKKLANLFLNRENGAKTSLSNNFGLHETSSSSSC 736
+RIP A G+NFLSFG LE S + L + ++GAK+SLS+NF H+ SS
Sbjct: 694 KRIPAALIPNGINFLSFGRAPLEFSGTRNLTS-----DSGAKSSLSSNFDAHKQSSFPG- 747
Query: 737 GENDAEVGNATTQIFSNSVQKSNDMPKKTQPAITPRGLNFLSTGKALANNTISNNQARLR 796
ND +VG T++ SNS M +KT+ A + N LS ++ N +I N Q +
Sbjct: 748 --NDVQVGKETSESVSNSKPWLKRMLQKTEFAASSLKSNSLSFNESSINASIGNAQDSMP 805
Query: 797 SSAGDVINRSLEESPNTPNMSQNSSANPWSLPGSSFTLGHSLDHSAQGYYRSTSNSAQRA 856
SS+ +++R+L+ES P+ Q+ P S G S D +S NSAQ+A
Sbjct: 806 SSSATLVDRTLQESEILPDRRQDFRTISHGQPASPLGSGQSADCLGHARLKSAPNSAQKA 865
Query: 857 ----LEFATKIEPKVKTNQSTVGT 876
L FA K+E ++K+ Q T+ T
Sbjct: 866 LISTLAFAAKVESQMKSKQPTIST 889
>gi|224091270|ref|XP_002309215.1| predicted protein [Populus trichocarpa]
gi|222855191|gb|EEE92738.1| predicted protein [Populus trichocarpa]
Length = 928
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 365/938 (38%), Positives = 498/938 (53%), Gaps = 128/938 (13%)
Query: 10 ETTSFCFSPHR--HLKSETYRALVQILSH---CYDHSQISAAQDSRPGMCGSGELVGPNA 64
ET F FSP R HLKS+TYR LV+ILSH C ++ +
Sbjct: 3 ETPLFTFSPLRKSHLKSQTYRTLVRILSHPQLCQFVPPPPGNGGDGGPHVLGNQVCSRHV 62
Query: 65 AVVDNSLAEKDKAGDEDRWFGDAQIVLDEIQDILQVEENGNLLKQELAVCDGDYETGNFD 124
+ SL +K+ ++R F D Q V++E+++I+ +EE+ NL+ + A TG D
Sbjct: 63 ELCHESLLDKN---GQERGFSDTQAVINEVENIMGIEEDENLVIDQTAC-----GTGLQD 114
Query: 125 EGLGQ-QRMLMDELEHILKGDVIFVHEED----------------ALVNDRQEHVDIQQI 167
L Q Q +L+DELEH++KG+V V + A+ N++ EH + +
Sbjct: 115 RDLIQAQHLLIDELEHLMKGNVELVCHNNSGPVTKRNRNAAGDVVAVSNNQDEHFERHPV 174
Query: 168 VNVESRSEAELQVDKGDSNLDVPKSFDSSVDRN--MDSHASKPAEDSEERNSKLRTNSLE 225
V E R +LQ+D + ++ +N + S SKP ++ EE +S RTN LE
Sbjct: 175 VIKECRGVGQLQLD------------EETLCQNNKISSEVSKPVDNCEE-SSLSRTNGLE 221
Query: 226 FENEMQQKEMEEEKLVHTNGIIGAHDHRAEDVEVEEGEISGHFEVDEVSIDMIIDNAVVS 285
NEMQQKE++ +K V + +G + ED E+EE E+SG FEVD+ S+DM ++AV
Sbjct: 222 VNNEMQQKEIQSDKSVCADATMG---YPPEDGEIEEREVSGEFEVDDGSVDMFSEDAVAP 278
Query: 286 NEKKEDEEQVSKDVTDKTDFPCNEKCGGTEKFSDSTSVCLNAVDHNASGGTVELQETVRN 345
EKK DE+Q S+ + DK P NEK +K S +S V++ VE Q+ +
Sbjct: 279 QEKKVDEKQASEAIIDKNRLPINEKNEANKKHSWFSSSMAYTVENAKDRREVEAQQRFSS 338
Query: 346 ETQCKTKIFADGTATMAIDPDRYNSMPGVGRNKRKASRGEEGISSFSASLD---DSTVQK 402
E CK K+ +A + GV K+K G + SA+ D DS V++
Sbjct: 339 EMACKRKVVTYEDPILAEE--------GVWCKKQKKCHGVREQNDGSAAKDQKRDSRVKE 390
Query: 403 E-------------VV------------KQRVTQEQGITTKDKLDSGACNKRKRSALSKE 437
+ VV Q + QGI +K+K D+G CNK+KR SKE
Sbjct: 391 QKKGNVANDGVGCPVVCPNNLASFTENSDQTASANQGIVSKEK-DAGLCNKKKRGPPSKE 449
Query: 438 KKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTV 497
KKAKKK+KERKKRAEKNRQLGV+R+KL L K V C H+LKGRC+EG KCKFSHD +
Sbjct: 450 KKAKKKEKERKKRAEKNRQLGVKRMKLLPVLNQKPVSPCRHFLKGRCREGQKCKFSHDAI 509
Query: 498 PLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
PLTKS + C HFAR+ CMKGDNCP+DH LSKYPC N+V+KG+C RGD+C+FSHK +
Sbjct: 510 PLTKS-EPCHHFARHKCMKGDNCPYDHQLSKYPCTNYVSKGYCIRGDSCMFSHK-----E 563
Query: 558 DPPTPS----TCTPELKPSPPLYASNLLKPLNNNKVSHQNVDALSNH-GKVSSFKNIEQS 612
D + S CTP++KP SN + L+ + S+Q AL + G +S + +
Sbjct: 564 DLASTSNVSNVCTPKVKPPSLPSTSNSKRQLDISGTSNQTAKALPDSTGVISDDRRAALN 623
Query: 613 VAKSILKPPALAPKGISYLFLGKSSFLEASNLGQGISSPKKSDSS-------KFANQTAQ 665
VAK++ PAL PKG+S+L GK S +E SSPK S S K NQ Q
Sbjct: 624 VAKTVQNLPALVPKGLSFLSGGKKSMVE--------SSPKTSSPSLKSNVFVKVGNQIDQ 675
Query: 666 IASDSVQSRDETPRRIP--VATKGVNFLSFGNRSLED-SSGKKLANLFLNRENGAKTSLS 722
AS +VQS +E PR+IP VA KG+NFLSFG L+ SS KL +L N+ NG S
Sbjct: 676 CASVTVQSCNEIPRKIPSVVAPKGINFLSFGKAPLDKCSSTMKLKSLAFNQGNGVNLFSS 735
Query: 723 NNFGLHETSSSSSCGENDAEVGNATTQIFSN-SVQKSNDMPKKTQPAITPRGLNFLSTGK 781
NF +HE + SSS +N VG T Q SN + N M +KT+P +
Sbjct: 736 KNFAVHEEACSSSNKDNSVLVGKETHQSVSNMAAHGLNKMLQKTEPT---------AFQD 786
Query: 782 ALANNTISNNQARLRSSAGDVINRSLEESPNTPNMSQNSSANPWSLPGSSFTLGHSLDHS 841
A A++ N QA L S+G ++ S++ES N SA LP S G S D
Sbjct: 787 ASADSFRRNQQASLPLSSGSGVHASVQESKIASNKHVELSALQGRLPASPLGSGQSSDQL 846
Query: 842 AQGYYRSTSNSAQRA----LEFATKIEPKVKTNQSTVG 875
A ++ SAQ+A L FATK+E +K NQST G
Sbjct: 847 AHACLKNKPISAQKALMSTLAFATKVESLMKMNQSTGG 884
>gi|297738650|emb|CBI27895.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 266/631 (42%), Positives = 369/631 (58%), Gaps = 24/631 (3%)
Query: 256 DVEVEEGEISGHFEVDEVSIDMIIDNAVVSNEKKEDEEQVSKDVTDKTDFPCNEKCGGTE 315
D ++EEGEISG F D D+ I++ V S KK +EE +S+++ +K +F CNE+ +
Sbjct: 21 DGDIEEGEISGDFMGD----DLSIEDDVASEMKKGEEESISENIINKEEFTCNEQKRVND 76
Query: 316 KFSDSTSVCLNAVDHNASGGTVELQETVRNETQCKTKIFADG-TATMAIDPDRYNSMPGV 374
K S+STS +++VD G VE+ E+ RN+ +CK+++ G T A D + M
Sbjct: 77 KDSESTSKIVSSVDKGDHG--VEVTESNRNQMRCKSQMGQGGRTINGAKKTDGSDCMREA 134
Query: 375 GRNKRKASRGEEGISSFSASLDDSTVQKEVVKQRVTQEQGITTKDKLDSGA-CNKRKRSA 433
K K SR + + + LDD E + + IT+ + GA K+++
Sbjct: 135 ETTKMKGSRAKVDFDNPANFLDDLVFHGESLADNAAENLSITS---VKEGARVTKKRKRV 191
Query: 434 LSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFS 493
LSKEKK KKKQKERKKRAEKN++LGV+RL+L KPKTV YC HYLKGRC EGD C+FS
Sbjct: 192 LSKEKKVKKKQKERKKRAEKNKELGVKRLRLLPVSKPKTVTYCRHYLKGRCHEGDHCRFS 251
Query: 494 HDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLP 553
HDT+PLTKS+ CCHFAR +CMKGD+CPFDH LS YPC N+V+KGFC+RGD+CLFSHK+P
Sbjct: 252 HDTIPLTKSS-PCCHFARGTCMKGDDCPFDHQLSNYPCNNYVSKGFCSRGDDCLFSHKMP 310
Query: 554 PKEQDPPTPSTCTPELKPSPPLYASNLLKPLNNNKVSHQNVDALSNHGKVSSFKNIEQSV 613
KE P + C P +P P L + + K L+ N SHQN ++LS+ + N+E+ V
Sbjct: 311 LKESSPTAVNVCKPVSEP-PSLPSKSYSKKLDMNGTSHQNGNSLSHSVGIFPQSNMEKKV 369
Query: 614 AKSILKPPALAPKGISYLFLGKSSFLEASNLGQGISSPKKSDSSKFANQTAQIASDSVQS 673
A+ +LKPP A +GI+ L GKS + L Q SSP + + Q Q VQ+
Sbjct: 370 AEIVLKPPEQASRGINSLSFGKSPMDYSGKLKQIGSSPTMDEGVEVDKQKNQ---GEVQN 426
Query: 674 RDETPRRIPVAT--KGVNFLSFGNRSLEDSSGKKLANLFLNRENGAKTSLSNNFGLHETS 731
+E +R PV +G+NFLSFG L DSS K+LA NRE+G K + ++
Sbjct: 427 MNEKAKRTPVTVPPRGINFLSFGKAPLNDSSVKELAGSPSNREDGNKILPLGDSNKYKQV 486
Query: 732 SSSSCGENDAEVGNATTQIFSNSVQKSNDMPKKTQPAITPRGLNFLSTGKALANNTISNN 791
SSS + + V + Q + ++ K N+M QPA P G+NFLS GKA ++ S
Sbjct: 487 GSSSARDGNINVSSQLNQSATETIHKLNEMSNGRQPAAAPPGINFLSFGKAPLDDLSSKR 546
Query: 792 QARLRSSAGDVINRSLEESPNTPNMSQNSSANPWSLPGSSFTLGHSLDHSAQGYYRSTSN 851
Q++ S + +VI ++E + QNSSA PW LP S T D G+ + TS+
Sbjct: 547 QSKSPSQSNNVIEIPIQERQRASSGFQNSSAVPWGLPASPIT--SVSDQLVHGHNKDTSS 604
Query: 852 SAQRA----LEFATKIEPKVKTNQSTVGTAV 878
SAQ+A L FA K E +K ++S V +V
Sbjct: 605 SAQKALLSTLAFAAKYESALKIDRSIVAPSV 635
>gi|225444885|ref|XP_002279436.1| PREDICTED: uncharacterized protein LOC100268102 [Vitis vinifera]
Length = 787
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 235/829 (28%), Positives = 377/829 (45%), Gaps = 141/829 (17%)
Query: 78 GDEDRWFGDAQIVLDEIQDILQVEENGNLLKQELAVCDGDYETGNFDEGLGQQRMLMDEL 137
G ++ + Q+V+DE++ I++ +EN +++ + +FD+ Q EL
Sbjct: 32 GFQEVGLSNVQVVMDELEQIMRGKENKDVVVGK----SNSSSILSFDK---DQNNTSREL 84
Query: 138 EHIL-----KGDVI---------------FVHEEDALVNDRQEHVDIQQIVNVESRSEAE 177
EH++ KGDV+ DA +N+ ++ ++Q ++ E +
Sbjct: 85 EHLMEKKEDKGDVVGKSINLLTLALNKNQSADHVDACINNHEDRFNLQHVIMEEDEDGEQ 144
Query: 178 LQVDKGDSNLDVPKSFDSSVDRNMDSHASKPAEDSEERNSKLRTNSLEFEN-EMQQKEME 236
++ +N+ + + S+D N++ SK E++ +++S + +LE ++QQKEME
Sbjct: 145 VKASDEQNNVVNLEGLNLSIDDNLNGEDSKADENNNKKSSPFKGIALEDPGLKVQQKEME 204
Query: 237 EEKLVHTNGIIGAHDHRAEDVEVEEGEISGHFEVDEVSIDMIIDNAVVSNEKKEDEEQVS 296
EK V + + D ++EEGEISG F D++SI+ + V S KK +EE +S
Sbjct: 205 LEKSVSPR-TASSPFYVTVDGDIEEGEISGDFMGDDLSIE----DDVASEMKKGEEESIS 259
Query: 297 KDVTDKTDFPCNEKCGGTEKFSDSTSVCLNAVDHNASGGTVELQETVRNETQCKTKIFAD 356
+++ +K +F CNE+ +K S+STS +++VD G VE+ E+ RN+ +CK+++
Sbjct: 260 ENIINKEEFTCNEQKRVNDKDSESTSKIVSSVDKGDHG--VEVTESNRNQMRCKSQMGQG 317
Query: 357 G-TATMAIDPDRYNSMPGVGRNKRKASRGEEGISSFSASLDDSTVQKEVVKQRVTQEQGI 415
G T A D + M K K SR + + + LDD E + + I
Sbjct: 318 GRTINGAKKTDGSDCMREAETTKMKGSRAKVDFDNPANFLDDLVFHGESLADNAAENLSI 377
Query: 416 TTKDKLDSGACNKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKY 475
T+ + GA +KR K
Sbjct: 378 TS---VKEGARVTKKR------------------------------------------KR 392
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
K ++GD C+FSHDT+PLTKS+
Sbjct: 393 VLSKEKKVKKKGDHCRFSHDTIPLTKSS-------------------------------- 420
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPLNNNKVSHQNVD 595
+P KE P + C P +P P L + + K L+ N SHQN +
Sbjct: 421 ----------------MPLKESSPTAVNVCKPVSEP-PSLPSKSYSKKLDMNGTSHQNGN 463
Query: 596 ALSNHGKVSSFKNIEQSVAKSILKPPALAPKGISYLFLGKSSFLEASNLGQGISSPKKSD 655
+LS+ + N+E+ VA+ +LKPP A +GI+ L GKS + L Q SSP +
Sbjct: 464 SLSHSVGIFPQSNMEKKVAEIVLKPPEQASRGINSLSFGKSPMDYSGKLKQIGSSPTMDE 523
Query: 656 SSKFANQTAQIASDSVQSRDETPRRIPVAT--KGVNFLSFGNRSLEDSSGKKLANLFLNR 713
+ Q Q VQ+ +E +R PV +G+NFLSFG L DSS K+LA NR
Sbjct: 524 GVEVDKQKNQ---GEVQNMNEKAKRTPVTVPPRGINFLSFGKAPLNDSSVKELAGSPSNR 580
Query: 714 ENGAKTSLSNNFGLHETSSSSSCGENDAEVGNATTQIFSNSVQKSNDMPKKTQPAITPRG 773
E+G K + ++ SSS + + V + Q + ++ K N+M QPA P G
Sbjct: 581 EDGNKILPLGDSNKYKQVGSSSARDGNINVSSQLNQSATETIHKLNEMSNGRQPAAAPPG 640
Query: 774 LNFLSTGKALANNTISNNQARLRSSAGDVINRSLEESPNTPNMSQNSSANPWSLPGSSFT 833
+NFLS GKA ++ S Q++ S + +VI ++E + QNSSA PW LP S T
Sbjct: 641 INFLSFGKAPLDDLSSKRQSKSPSQSNNVIEIPIQERQRASSGFQNSSAVPWGLPASPIT 700
Query: 834 LGHSLDHSAQGYYRSTSNSAQRA----LEFATKIEPKVKTNQSTVGTAV 878
D G+ + TS+SAQ+A L FA K E +K ++S V +V
Sbjct: 701 --SVSDQLVHGHNKDTSSSAQKALLSTLAFAAKYESALKIDRSIVAPSV 747
>gi|357495183|ref|XP_003617880.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355519215|gb|AET00839.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 928
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 218/446 (48%), Gaps = 36/446 (8%)
Query: 430 KRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDK 489
KR S+EKK +K++K RK +AEKNR+ G +R K KPK K C HY+KGRC EGD+
Sbjct: 460 KRGPGSQEKKTRKRKKYRKNKAEKNREPGGKRPKFIPEQKPKP-KQCRHYMKGRCHEGDQ 518
Query: 490 CKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFS 549
C FSHD +PLTKS C H+A SCMKG++CP+DH LSKYPC NFV+KG C RG C+FS
Sbjct: 519 CNFSHDAIPLTKSV-PCAHYACGSCMKGNDCPYDHQLSKYPCSNFVSKGSCYRG-RCMFS 576
Query: 550 HKLPPKEQDPPTPS-TCTPELKPSPPLYASNLLKPLNNNKV-SHQNVDALSNHGKVSSFK 607
H++ QD PTP+ C PELK +N PLNN+ S Q + SN + S
Sbjct: 577 HQV-QTSQDIPTPTNACKPELKSPLSSGNTNFSTPLNNHGTGSVQQTN--SNSKGIYSHT 633
Query: 608 NIEQSVAKSILKPPALAPKGISYLFLGKSSFLEASNLGQGISSPKKSDSSKFANQTAQIA 667
N+E V P APKGI ++ + L + Q P K +
Sbjct: 634 NVEHKVTDVSQTKPTSAPKGIRFINVAN---LSPTTPKQDTVQPNKGNLVH-----GGTC 685
Query: 668 SDSVQSRDETPRRIP-VATKGVNFLSFGNRSLEDSSGKKLANLFLNRENGAKTSLSNNFG 726
+D Q+ E ++IP V KGVNFLSFG S+ KL+ +E K S NFG
Sbjct: 686 ADKGQNTVEISKKIPAVMPKGVNFLSFGKGSV---CSFKLSIQSTAQEMILKLPQSVNFG 742
Query: 727 LHETSSSSSCGENDAEVGNATTQIFSNSVQKSNDMPKKTQPAITPRGLNFLSTGKALANN 786
L E S S ++ + + T Q + S+++ K Q FL
Sbjct: 743 LSEHSVSLLNKDDHGKAIDITAQNLPQTALFSHEISDKNQSMAERMKSRFLEKDS----- 797
Query: 787 TISNNQARLRSSAGDVINRSLEESPNTPNMSQNSSANPWSLPGSSFTLGHSLDHSAQGYY 846
+++ R S +S +E + SQ S+ +L S F S + G
Sbjct: 798 --TDDSVRDHSHC-----KSAQEVNKASDNSQASTVTSATLLASPFVSLQSSEGLVSGCP 850
Query: 847 RSTSNSAQRA----LEFATKIEPKVK 868
+ SN QRA L FA + E +K
Sbjct: 851 KQASNIGQRALISTLAFAAEHESNIK 876
>gi|297796577|ref|XP_002866173.1| EMB1789 [Arabidopsis lyrata subsp. lyrata]
gi|297312008|gb|EFH42432.1| EMB1789 [Arabidopsis lyrata subsp. lyrata]
Length = 666
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 183/309 (59%), Gaps = 57/309 (18%)
Query: 420 KLDSGACNKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKL-PQNLKPKTVKYCHH 478
++D G K KRSA SK+ KA+K+ K RKKRA++ LGV++LKL P KPK +KYC H
Sbjct: 290 EMDPGTSIK-KRSAPSKDAKARKRAKARKKRAKERIALGVKKLKLKPVAPKPKPIKYCRH 348
Query: 479 YLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKG 538
YLKGRC EGDKCKFSHDT P TKS+ ACC+FA SCMKGD+CPFDHDLSKYPC NF+ KG
Sbjct: 349 YLKGRCHEGDKCKFSHDTTPETKSS-ACCYFATQSCMKGDDCPFDHDLSKYPCNNFIIKG 407
Query: 539 FCNRGDNCLFSHK-LPPKEQDPP-----------TPSTCTPE----------LKPSPPLY 576
FC+RGD+CLFSHK P D P T ++ +P+ + P +
Sbjct: 408 FCHRGDSCLFSHKGTPQSASDTPSANVTASSTNITAASFSPQKTNKQSVREAIAKLPGIQ 467
Query: 577 AS-----NLLKPLNNNKVSHQNV-DALSNHGKVSSFKNIEQSVAKSILKPPALAPKGISY 630
A LKPL+ + +H+N DALS K++ Q + L+ P++APKG+S+
Sbjct: 468 ARVSSSVGFLKPLSQS--NHRNPSDALS--PKINEPVTHPQVLP---LRKPSVAPKGMSF 520
Query: 631 LFLGKSSFLEASNLGQGISSPKKSDSSKFANQT---AQIASDSVQSRDETPRRIP-VATK 686
L L K+ + + +S + +D+S NQT +Q+ S +P V K
Sbjct: 521 LSLDKT--FQEDTVKVSPASKRNTDNSD--NQTLKQSQLGSS-----------LPLVPPK 565
Query: 687 GVNFLSFGN 695
G++FLSF +
Sbjct: 566 GISFLSFAS 574
>gi|15241989|ref|NP_200503.1| zinc finger CCCH domain-containing protein 65 [Arabidopsis
thaliana]
gi|75264233|sp|Q9LTS7.1|C3H65_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 65;
Short=AtC3H65; AltName: Full=Protein EMBRYO DEFECTIVE
1789
gi|8777433|dbj|BAA97023.1| unnamed protein product [Arabidopsis thaliana]
gi|332009441|gb|AED96824.1| zinc finger CCCH domain-containing protein 65 [Arabidopsis
thaliana]
Length = 675
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/293 (45%), Positives = 166/293 (56%), Gaps = 46/293 (15%)
Query: 412 EQGITTKDKLDSGACNKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKL-PQNLKP 470
+Q + + K+D G K KRSA SK+ KA+K+ K R KRA++ LGV++LKL P KP
Sbjct: 292 DQTFSNEAKMDPGTSIK-KRSAPSKDAKARKRAKARIKRAQERIALGVKKLKLKPVAPKP 350
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K +KYC HYLKGRC EGDKCKFSHDT+P TK + CC+FA SCMKGD+CPFDHDLSKYP
Sbjct: 351 KPIKYCRHYLKGRCHEGDKCKFSHDTIPETKCS-PCCYFATQSCMKGDDCPFDHDLSKYP 409
Query: 531 CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPLNNNKVS 590
C NF+ KGFC RGD+CLFSHK P+ AS+ P N VS
Sbjct: 410 CNNFITKGFCYRGDSCLFSHKGTPQS--------------------ASD--TPSANVTVS 447
Query: 591 HQNVDALSNHGKVSSFKNIEQSVAKSILKPPALAPK-GISYLFLGKSSFLEASNLGQGIS 649
+ A S S K +QSV +I K PA+ + S FL SS N
Sbjct: 448 STKITAAS----FSPQKTKKQSVRDAIAKLPAIQARVSSSVAFLKPSSHSNQRN------ 497
Query: 650 SPKKSDSSKFANQTAQIASDSVQSRDETPRRIP-VATKGVNFLSFGNRSLEDS 701
SD+S +++I ++ V P R P VA KG++FLS S ED+
Sbjct: 498 ---SSDAS-----SSKI-NEHVTPPQVPPLRKPSVAPKGMSFLSLDKTSQEDT 541
>gi|357135268|ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containing protein 7-like
[Brachypodium distachyon]
Length = 685
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 124/214 (57%), Gaps = 13/214 (6%)
Query: 427 NKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQE 486
KRKR ++E+KAKK + +R KRA + GV+RLKL +KPK V+YCH YL G+CQ+
Sbjct: 385 GKRKR-IFTEERKAKKTKNKRVKRALQREADGVKRLKLAPIIKPKVVRYCHFYLHGKCQQ 443
Query: 487 GDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNC 546
G+ CKFSHDT PLTKS K C HFAR SC+KGD+CP+DH+LSKYPC NF+ G C RGD C
Sbjct: 444 GNVCKFSHDTTPLTKS-KPCTHFARGSCLKGDDCPYDHELSKYPCHNFLGNGMCLRGDKC 502
Query: 547 LFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPLNNN---KVS--HQNVDALSNHG 601
FSH P + + T + K S S L N K+S H S
Sbjct: 503 KFSHVAPTADD------SSTKDAKKSDASLVSEKLTSKEQNSSQKISTVHDGEPVASAPT 556
Query: 602 KVSSFKNIEQSVAKSILKPPALAPKGISYLFLGK 635
K S S++K+ K A PKG+ +L K
Sbjct: 557 KHYSILKTLGSISKNAQKASAHMPKGVQFLAFSK 590
>gi|326524087|dbj|BAJ97054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 95/126 (75%), Gaps = 2/126 (1%)
Query: 428 KRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEG 487
KRKR L++E+KAKK + +R KRA++ GV++LKL +KPK VK+CH Y+ G+CQ G
Sbjct: 368 KRKR-LLTEERKAKKTKNKRVKRAQQRIADGVKKLKLAPVIKPKPVKFCHFYMHGKCQLG 426
Query: 488 DKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCL 547
+ CKFSHDT PLTKS K C HFAR SC+KGD CP+DH+LSKYPC NFV G C RGD C
Sbjct: 427 NACKFSHDTTPLTKS-KPCTHFARGSCLKGDECPYDHELSKYPCHNFVENGMCFRGDKCK 485
Query: 548 FSHKLP 553
FSH +P
Sbjct: 486 FSHVVP 491
>gi|75275745|sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 7;
Short=OsC3H7
gi|52076312|dbj|BAD45097.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 132/218 (60%), Gaps = 19/218 (8%)
Query: 427 NKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQE 486
N RKR+ L++E+KAKK + +R KRA + GV+RLKL +KPK VK CH YL G+CQ+
Sbjct: 387 NTRKRT-LTEERKAKKTKTKRIKRALQREAEGVKRLKLQPVIKPKVVKVCHFYLHGKCQQ 445
Query: 487 GDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNC 546
G+ CKFSHDT PLTKS K C H+AR SC+KGD+CP+DH+LSKYPC NF+ G C RGD C
Sbjct: 446 GNLCKFSHDTTPLTKS-KPCTHYARGSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKC 504
Query: 547 LFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPLN-NNKVSHQNVDALSNHGKVSS 605
FSH +P E PS TP+ K S AS++ + N + S Q + + +S
Sbjct: 505 KFSHVIPTAE----GPS--TPDAKKS---NASSVPEKANCQEQTSRQKTSTVYSGEPATS 555
Query: 606 FKNIEQSVAKSIL-------KPPALAPKGISYLFLGKS 636
S+ K++ K P P+GI +L K+
Sbjct: 556 VPIKHHSILKNLAGISGNAQKVPVRIPRGIQFLPFNKA 593
>gi|222618708|gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japonica Group]
Length = 698
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 132/218 (60%), Gaps = 19/218 (8%)
Query: 427 NKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQE 486
N RKR+ L++E+KAKK + +R KRA + GV+RLKL +KPK VK CH YL G+CQ+
Sbjct: 387 NTRKRT-LTEERKAKKTKTKRIKRALQREAEGVKRLKLQPVIKPKVVKVCHFYLHGKCQQ 445
Query: 487 GDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNC 546
G+ CKFSHDT PLTKS K C H+AR SC+KGD+CP+DH+LSKYPC NF+ G C RGD C
Sbjct: 446 GNLCKFSHDTTPLTKS-KPCTHYARGSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKC 504
Query: 547 LFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPLN-NNKVSHQNVDALSNHGKVSS 605
FSH +P E PS TP+ K S AS++ + N + S Q + + +S
Sbjct: 505 KFSHVIPTAE----GPS--TPDAKKS---NASSVPEKANCQEQTSRQKTSTVYSGEPATS 555
Query: 606 FKNIEQSVAKSIL-------KPPALAPKGISYLFLGKS 636
S+ K++ K P P+GI +L K+
Sbjct: 556 VPIKHHSILKNLAGISGNAQKVPVRIPRGIQFLPFNKA 593
>gi|218188502|gb|EEC70929.1| hypothetical protein OsI_02512 [Oryza sativa Indica Group]
Length = 698
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 132/218 (60%), Gaps = 19/218 (8%)
Query: 427 NKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQE 486
N RKR+ L++E+KAKK + +R KRA + GV+RLKL +KPK VK CH YL G+CQ+
Sbjct: 387 NTRKRT-LTEERKAKKTKTKRIKRALQREAEGVKRLKLQPVIKPKVVKVCHFYLHGKCQQ 445
Query: 487 GDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNC 546
G+ CKFSHDT PLTKS K C H+AR SC+KGD+CP+DH+LSKYPC NF+ G C RGD C
Sbjct: 446 GNLCKFSHDTTPLTKS-KPCTHYARGSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKC 504
Query: 547 LFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPLN-NNKVSHQNVDALSNHGKVSS 605
FSH +P E PS TP+ K S AS++ + N + S Q + + +S
Sbjct: 505 KFSHVIPTAE----GPS--TPDAKKS---NASSVPEKANCQEQTSRQKTSTVYSGEPATS 555
Query: 606 FKNIEQSVAKSIL-------KPPALAPKGISYLFLGKS 636
S+ K++ K P P+GI +L K+
Sbjct: 556 VPIKHHSILKNLAGISGNAQKVPIRIPRGIQFLPFNKA 593
>gi|168063820|ref|XP_001783866.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664598|gb|EDQ51311.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 930
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 90/138 (65%), Gaps = 4/138 (2%)
Query: 415 ITTKDKLDSGACNKRK-RSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQN-LKPKT 472
IT + K+DS K+K R+ +S E+K KKK R+KRAEK ++LG+RR +LP N KPK
Sbjct: 508 ITRRIKIDSDEDGKKKTRAPISAERKLKKKIAFRRKRAEKEKELGIRRPRLPVNTFKPK- 566
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCE 532
V C Y+KGRC G KC FSHD VP+TKS C F N C+KGD+CPF H L +PC+
Sbjct: 567 VPLCKFYIKGRCTLGGKCTFSHDVVPVTKS-DPCKFFMVNRCLKGDDCPFSHTLDTFPCK 625
Query: 533 NFVAKGFCNRGDNCLFSH 550
+ +G C G NC FSH
Sbjct: 626 FWHTRGHCLDGSNCRFSH 643
>gi|242053355|ref|XP_002455823.1| hypothetical protein SORBIDRAFT_03g025780 [Sorghum bicolor]
gi|241927798|gb|EES00943.1| hypothetical protein SORBIDRAFT_03g025780 [Sorghum bicolor]
Length = 689
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 96/162 (59%), Gaps = 15/162 (9%)
Query: 409 VTQEQGITTKDKLD-----------SGACNKRKRSALSKEKKAKKKQKERKKRAEKNRQL 457
VT+ Q +T D +D KRKR+ ++++KAKK + +R RA +
Sbjct: 359 VTRAQAVTYDDVVDWNENPLPDNEAPNPGKKRKRTQ-TEQRKAKKTKNKRINRALQQIAD 417
Query: 458 GVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKG 517
GVRR KL + +KPK K C+ Y G+CQ+G+ CK+SHD P TKS K C HFA SC+KG
Sbjct: 418 GVRRPKLTRVIKPK--KPCYFYDHGKCQQGNNCKYSHDFTPSTKS-KPCTHFACGSCLKG 474
Query: 518 DNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDP 559
+ CP+DH+LSKY C N+ G C RGD C FSH + E P
Sbjct: 475 EGCPYDHELSKYECHNYKNNGMCARGDKCKFSHVMRTTEGTP 516
>gi|414881499|tpg|DAA58630.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414881500|tpg|DAA58631.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 691
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 88/132 (66%), Gaps = 3/132 (2%)
Query: 428 KRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEG 487
K+++ L++E+KAKK + +RK RA + GV+R KL KPK K CH Y G+C++G
Sbjct: 390 KKRKRILTEERKAKKTKNKRKNRALQRIADGVKRPKLTPVTKPK--KPCHFYDHGKCRQG 447
Query: 488 DKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCL 547
+ CKFSHD P TKS K C HFA SC+KG+ CP+DH+LSKY C N+ G C RGDNC
Sbjct: 448 NNCKFSHDFTPSTKS-KPCTHFACGSCLKGEECPYDHELSKYECHNYKNNGTCARGDNCK 506
Query: 548 FSHKLPPKEQDP 559
FSH +P E P
Sbjct: 507 FSHVMPTTEGTP 518
>gi|408690392|gb|AFU81656.1| C3H-type transcription factor, partial [Zea mays subsp. mays]
Length = 691
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 87/132 (65%), Gaps = 3/132 (2%)
Query: 428 KRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEG 487
K+++ L++E+KAKK + +RK RA + GV+R KL KPK K CH Y G+C++G
Sbjct: 390 KKRKRILTEERKAKKTKNKRKNRALQRIADGVKRPKLTPVTKPK--KPCHFYDHGKCRQG 447
Query: 488 DKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCL 547
+ CKFSHD P TKS K C HFA SC+ G+ CP+DH+LSKY C N+ G C RGDNC
Sbjct: 448 NNCKFSHDFTPSTKS-KPCTHFACGSCLXGEECPYDHELSKYECHNYKNNGTCARGDNCK 506
Query: 548 FSHKLPPKEQDP 559
FSH +P E P
Sbjct: 507 FSHVMPTTEGTP 518
>gi|209875837|ref|XP_002139361.1| zinc finger, CCCH type domain-containing protein [Cryptosporidium
muris RN66]
gi|209554967|gb|EEA05012.1| zinc finger, CCCH type domain-containing protein [Cryptosporidium
muris RN66]
Length = 297
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 465 PQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
P NL+ ++ +C +LKGRC G C+F H P+TK K C +F SC KG C + H
Sbjct: 51 PANLRTRS--FCTFFLKGRCDRGSTCQFLHTAEPITKQ-KPCWYFLGGSCTKGAECLYSH 107
Query: 525 DLSKYPCENFVAKGFCNRGDNCLFSHKLP 553
DLS++PC GFC NC FSH+LP
Sbjct: 108 DLSQFPCRYIHTIGFCRNLQNCRFSHRLP 136
>gi|302812797|ref|XP_002988085.1| hypothetical protein SELMODRAFT_127258 [Selaginella moellendorffii]
gi|300144191|gb|EFJ10877.1| hypothetical protein SELMODRAFT_127258 [Selaginella moellendorffii]
Length = 88
Score = 87.4 bits (215), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 480 LKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGF 539
+KGRC +G C FSH+ VP TK C +F C+KGD CPF HD +K+PC+ F++ GF
Sbjct: 1 MKGRCSKGKSCTFSHEEVPDTK-LYLCKYFLTRCCLKGDECPFSHDTAKFPCKFFISLGF 59
Query: 540 CNRGDNCLFSHKLPPKEQ 557
C G+ C FSH KE+
Sbjct: 60 CKDGEKCKFSHAPVSKEE 77
>gi|356552011|ref|XP_003544365.1| PREDICTED: uncharacterized protein LOC100816509 [Glycine max]
Length = 445
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 44/62 (70%)
Query: 452 EKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR 511
EKN+QLGV+RL+L KPK V +C HYL GRC EGDKC+FSHD VPLTKS H
Sbjct: 314 EKNKQLGVKRLQLQHVQKPKVVSHCRHYLNGRCHEGDKCQFSHDVVPLTKSKGMIAHLIT 373
Query: 512 NS 513
+S
Sbjct: 374 SS 375
>gi|67624361|ref|XP_668463.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54659656|gb|EAL38223.1| hypothetical protein Chro.50279 [Cryptosporidium hominis]
Length = 253
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
KP ++ C +++KGRC+ G C+F H T+P+TK K C +F C K D C + H++SK
Sbjct: 34 KPNRLQLCTYFIKGRCKNGSSCQFKHSTIPITKK-KLCWYFISGKCSKSD-CQYSHEISK 91
Query: 529 YPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
+PC GFC +C FSH+L EQ
Sbjct: 92 FPCRYLNTVGFCRNLKDCRFSHELIKTEQ 120
>gi|302781875|ref|XP_002972711.1| hypothetical protein SELMODRAFT_98217 [Selaginella moellendorffii]
gi|300159312|gb|EFJ25932.1| hypothetical protein SELMODRAFT_98217 [Selaginella moellendorffii]
Length = 104
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 480 LKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGF 539
+KGRC +G C FSH+ VP TK C +F C+KGD CPF HD +K+PC+ F++ GF
Sbjct: 1 MKGRCSKGKSCTFSHEEVPDTK-LYLCKYFLTRCCLKGDECPFSHDTAKFPCKFFISLGF 59
Query: 540 CNRGDNCLFSHKLPPKEQ 557
C G+ C FSH KE+
Sbjct: 60 CKDGERCKFSHASVSKEE 77
>gi|66357760|ref|XP_626058.1| CCCH RNA binding domain involved in RNA metabolism [Cryptosporidium
parvum Iowa II]
gi|46227182|gb|EAK88132.1| CCCH RNA binding domain involved in RNA metabolism [Cryptosporidium
parvum Iowa II]
gi|323509343|dbj|BAJ77564.1| cgd5_1070 [Cryptosporidium parvum]
Length = 253
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD 525
Q+ K ++ C +++KGRC+ G C+F H +P+TK K C +F C K D C + H+
Sbjct: 31 QSNKSNRLQLCTYFIKGRCKNGSSCQFKHSAIPITKK-KLCWYFISGKCSKSD-CQYSHE 88
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
+SK+PC GFC +C FSH+L EQ
Sbjct: 89 ISKFPCRYLNTVGFCRNLKDCRFSHELIKTEQ 120
>gi|154323822|ref|XP_001561225.1| hypothetical protein BC1G_00310 [Botryotinia fuckeliana B05.10]
Length = 913
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Query: 464 LPQNLKPKTVKY--CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA-----CCHFARNSCMK 516
L QNL+P K C KG CQ+G+ C FSH T P S K+ C FAR C +
Sbjct: 47 LGQNLRPIATKLIACRFLAKGHCQKGEDCPFSHGTEPAAPSQKSSVTPLCSFFARGRCQR 106
Query: 517 GDNCPFDHDL-----SKYPCE---NFVAKGFCNRGDNCLFSH 550
GDNCPF H++ S+ P +F ++G C RG NCL+ H
Sbjct: 107 GDNCPFSHEIEVETSSETPFRTTCSFFSRGKCTRGSNCLYLH 148
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 37/128 (28%)
Query: 476 CHHYLKGR-CQEGDKCKFSHDTV--------------------------PLTKSTKACCH 508
C +++ C G+ C++SHDT P+ AC
Sbjct: 4 CKYFITSTGCGRGNTCQYSHDTTITTNTPDPILLLMFGNENQPLGQNLRPIATKLIACRF 63
Query: 509 FARNSCMKGDNCPFDHDL---------SKYPCENFVAKGFCNRGDNCLFSHKLPPK-EQD 558
A+ C KG++CPF H S P +F A+G C RGDNC FSH++ + +
Sbjct: 64 LAKGHCQKGEDCPFSHGTEPAAPSQKSSVTPLCSFFARGRCQRGDNCPFSHEIEVETSSE 123
Query: 559 PPTPSTCT 566
P +TC+
Sbjct: 124 TPFRTTCS 131
>gi|347829984|emb|CCD45681.1| similar to transcription factor Zn, C2H2 [Botryotinia fuckeliana]
Length = 914
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Query: 464 LPQNLKPKTVKY--CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA-----CCHFARNSCMK 516
L QNL+P K C KG CQ+G+ C FSH T P S K+ C FAR C +
Sbjct: 48 LGQNLRPIATKLIACRFLAKGHCQKGEDCPFSHGTEPAAPSQKSSVTPLCSFFARGRCQR 107
Query: 517 GDNCPFDHDL-----SKYPCE---NFVAKGFCNRGDNCLFSH 550
GDNCPF H++ S+ P +F ++G C RG NCL+ H
Sbjct: 108 GDNCPFSHEIEVETSSETPFRTTCSFFSRGKCTRGSNCLYLH 149
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 37/128 (28%)
Query: 476 CHHYLKGR-CQEGDKCKFSHDTV--------------------------PLTKSTKACCH 508
C +++ C G+ C++SHDT P+ AC
Sbjct: 5 CKYFITSTGCGRGNTCQYSHDTTITTNTPDPILLLMFGNENQPLGQNLRPIATKLIACRF 64
Query: 509 FARNSCMKGDNCPFDHDL---------SKYPCENFVAKGFCNRGDNCLFSHKLPPK-EQD 558
A+ C KG++CPF H S P +F A+G C RGDNC FSH++ + +
Sbjct: 65 LAKGHCQKGEDCPFSHGTEPAAPSQKSSVTPLCSFFARGRCQRGDNCPFSHEIEVETSSE 124
Query: 559 PPTPSTCT 566
P +TC+
Sbjct: 125 TPFRTTCS 132
>gi|410901545|ref|XP_003964256.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6-like [Takifugu rubripes]
Length = 1131
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL---SKYPCE 532
C ++L+GRC +GD+CKF H+ V K + C + + C KGDNC + H++ +YPC+
Sbjct: 296 CKYFLEGRCIKGDQCKFEHEHVVPDKKKELCKFYLQGYCSKGDNCIYMHNILQXYEYPCK 355
Query: 533 NFVAKGFCNRGDNCLFSH 550
F C +GDNC FSH
Sbjct: 356 FFHTGAKCYQGDNCKFSH 373
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 506 CCHFARNSCMKGDNCPFDH-----DLSKYPCENFVAKGFCNRGDNCLFSHKL 552
C +F C+KGD C F+H D K C+ F +G+C++GDNC++ H +
Sbjct: 296 CKYFLEGRCIKGDQCKFEHEHVVPDKKKELCK-FYLQGYCSKGDNCIYMHNI 346
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHD 525
K + C YL+G C +GD C + H+ L C F + C +GDNC F HD
Sbjct: 321 KKKELCKFYLQGYCSKGDNCIYMHNI--LQXYEYPCKFFHTGAKCYQGDNCKFSHD 374
>gi|47228963|emb|CAG09478.1| unnamed protein product [Tetraodon nigroviridis]
Length = 855
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+GRC +GD+CKF H+ V K + C + + C KGDNC + H++ YPC+ F
Sbjct: 5 CKYFLEGRCIKGDQCKFEHEHVVPDKKKELCKFYLQGYCSKGDNCIYMHNIL-YPCKFFH 63
Query: 536 AKGFCNRGDNCLFSH 550
C +GDNC FSH
Sbjct: 64 TGAKCYQGDNCKFSH 78
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 506 CCHFARNSCMKGDNCPFDH-----DLSKYPCENFVAKGFCNRGDNCLFSHKL 552
C +F C+KGD C F+H D K C+ F +G+C++GDNC++ H +
Sbjct: 5 CKYFLEGRCIKGDQCKFEHEHVVPDKKKELCK-FYLQGYCSKGDNCIYMHNI 55
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHD 525
K + C YL+G C +GD C + H+ + C F + C +GDNC F HD
Sbjct: 30 KKKELCKFYLQGYCSKGDNCIYMHNIL------YPCKFFHTGAKCYQGDNCKFSHD 79
>gi|348507314|ref|XP_003441201.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Oreochromis niloticus]
Length = 1133
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+GRC +G++CKF H+ V K + C + + C KGDNC + H+ +YPC+ F
Sbjct: 300 CKYFLEGRCIKGEQCKFEHELVVPDKKKELCKFYLQGYCSKGDNCIYMHN--EYPCKFFH 357
Query: 536 AKGFCNRGDNCLFSHK 551
C +GDNC FSH+
Sbjct: 358 TGAKCYQGDNCKFSHE 373
>gi|348537930|ref|XP_003456445.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Oreochromis niloticus]
Length = 1289
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++GRC GD C FSHD + L K + C + C + D+CP+ H ++PC+ F
Sbjct: 360 CKYYIEGRCTWGDHCNFSHD-IELPKKKELCKFYITGFCARADHCPYMH--GEFPCKLFH 416
Query: 536 AKGFCNRGDNCLFSHK 551
G C GD C+FSH+
Sbjct: 417 TTGKCVNGDECMFSHE 432
>gi|403223962|dbj|BAM42092.1| uncharacterized protein TOT_040000468 [Theileria orientalis strain
Shintoku]
Length = 252
Score = 76.3 bits (186), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 427 NKRKRSALSKEKKAKKKQK-----ERKK-----RAEKNRQLGVRRLKLPQNLKPKTVKYC 476
N +KR S E A+ KQ+ ER+K R+E++R K K++ C
Sbjct: 17 NYQKRKTRSSEGYARHKQRYDQILERRKQIEAVRSERDRYAHTETRYNRNQYKDKSMIIC 76
Query: 477 HHYLK-GRCQEGDKCKFSHDTVPL-TKSTKACCHFARNS-CMK-GDNCPFDHDLSKYPCE 532
++ + G+C +GD C FSHD PL +K K C +F ++ C K + C + H++ K+ C
Sbjct: 77 RYFYRYGKCTKGDACLFSHDCTPLNSKDLKLCHYFVKSEGCKKSAEECKYSHEIHKFLCR 136
Query: 533 NFVAKGFCNRGDNCLFSH 550
V GFCN+G C F+H
Sbjct: 137 QNVIAGFCNQGGKCQFNH 154
>gi|354471279|ref|XP_003497870.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Cricetulus
griseus]
Length = 1168
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD CKF HD L K + C ++ + C KG+NC + H S++P
Sbjct: 261 KGKQICKYFLEGRCIKGDHCKFDHDAE-LEKKKEICKYYLQGYCTKGENCIYMH--SEFP 317
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 318 CKFYHSGAKCYQGDNCKFSH 337
>gi|432906538|ref|XP_004077579.1| PREDICTED: uncharacterized protein LOC101161746 [Oryzias latipes]
Length = 1072
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+GRC +G++CKF H+ V K + C + + C KGD+C + H+ +YPC+ F
Sbjct: 290 CKYFLEGRCIKGEQCKFEHELVVPDKKKELCKFYLQGYCSKGDHCIYMHN--EYPCKFFH 347
Query: 536 AKGFCNRGDNCLFSH 550
C +GDNC FSH
Sbjct: 348 TGAKCYQGDNCKFSH 362
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS--CMKGDNCPFDHD 525
K + C YL+G C +GD C + H+ P C F C +GDNC F HD
Sbjct: 315 KKKELCKFYLQGYCSKGDHCIYMHNEYP--------CKFFHTGAKCYQGDNCKFSHD 363
>gi|428185523|gb|EKX54375.1| hypothetical protein GUITHDRAFT_99857 [Guillardia theta CCMP2712]
Length = 934
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +LKG C +GD C FSH P C R C +GD C F HDLS+ PC+ F
Sbjct: 779 CTFWLKGCCNKGDACPFSHQAEP---PMIVCKFLLRGDCSRGDACSFSHDLSRIPCKFFH 835
Query: 536 AKGFCNRGDNCLFSH 550
G C++G C F H
Sbjct: 836 VGGNCSKGAACPFGH 850
>gi|432891076|ref|XP_004075536.1| PREDICTED: uncharacterized protein LOC101162773 [Oryzias latipes]
Length = 879
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++GRC GD C FSHD V L K + C + C + D+CP+ H ++PC+ F
Sbjct: 376 CKYYIEGRCTWGDHCNFSHD-VELPKKKELCKFYITGFCARADHCPYMH--GEFPCKLFH 432
Query: 536 AKGFCNRGDNCLFSHK 551
G C GD C+FSH+
Sbjct: 433 TTGNCVNGDECMFSHE 448
>gi|351705068|gb|EHB07987.1| Zinc finger CCCH domain-containing protein 6 [Heterocephalus
glaber]
Length = 1143
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H S++P
Sbjct: 232 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMH--SEFP 288
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 289 CKFYHSGAKCYQGDNCKFSH 308
>gi|71028878|ref|XP_764082.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351036|gb|EAN31799.1| hypothetical protein, conserved [Theileria parva]
Length = 250
Score = 74.7 bits (182), Expect = 2e-10, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 427 NKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLP--------QNLKPKTVKYCHH 478
+ R+R S E A+ KQ+ + E+ + + RR +P K K++ C +
Sbjct: 18 DDRRRKTRSGEAFARHKQR-YNEILERRKMMDDRRNDIPPPPVRYGRNEYKDKSMIICRY 76
Query: 479 YLK-GRCQEGDKCKFSHDTVPL-TKSTKACCHFARNS-CMK-GDNCPFDHDLSKYPCENF 534
+ + G C +G+ C FSHD PL +K K C F +N C K + C + H++ K+ C
Sbjct: 77 FYRFGTCTKGEACIFSHDCTPLNSKDLKLCHFFVKNEGCKKTAEECKYSHEIHKFLCRQN 136
Query: 535 VAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELK---PSPPLYASNLLKPL-NNNKVS 590
V GFCN G NC F+H +P QD T +LK + +L+ L N+N ++
Sbjct: 137 VINGFCNLGGNCQFNH-MP---QDSIQRMDDTEKLKFCYNNKKFLVKSLINFLINDNWIN 192
Query: 591 HQNV----DALSNHGKVSSFKNIEQSVAKSI 617
Q++ D V+S+ NI + + K+I
Sbjct: 193 PQHIGVCDDVKGLTAIVTSYNNIPEKIIKTI 223
>gi|326674230|ref|XP_686060.4| PREDICTED: hypothetical protein LOC557823 [Danio rerio]
Length = 1323
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ F
Sbjct: 364 CKYYIEGRCTWGDHCNFSHD-IELPKKKELCKFYITGFCARAENCPYMH--GDFPCKLFH 420
Query: 536 AKGFCNRGDNCLFSH 550
G C G+ C+FSH
Sbjct: 421 TTGNCVNGEECMFSH 435
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 498 PLTKSTKACCHFARNSCMKGDNCPFDHDLS----KYPCENFVAKGFCNRGDNCLFSH 550
P K C ++ C GD+C F HD+ K C+ F GFC R +NC + H
Sbjct: 356 PEKKGKAICKYYIEGRCTWGDHCNFSHDIELPKKKELCK-FYITGFCARAENCPYMH 411
>gi|281350492|gb|EFB26076.1| hypothetical protein PANDA_013671 [Ailuropoda melanoleuca]
Length = 1161
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ +++P
Sbjct: 254 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN-NEFP 311
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 312 CKFYHSGAKCYQGDNCKFSH 331
>gi|395853711|ref|XP_003799347.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Otolemur
garnettii]
Length = 1260
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 345 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 401
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 402 CKFYHSGAKCYQGDNCKFSH 421
>gi|402891928|ref|XP_003909180.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6, partial [Papio anubis]
Length = 1177
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 261 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 317
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 318 CKFYHSGAKCYQGDNCKFSH 337
>gi|27696591|gb|AAH43311.1| Zinc finger CCCH type containing 6 [Mus musculus]
Length = 936
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD CKF+HD L K + C ++ + C KG+NC + H S++P
Sbjct: 30 KGKQICKYFLEGRCIKGDHCKFNHDAE-LEKKKEVCKYYLQGYCTKGENCIYMH--SEFP 86
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GD C FSH
Sbjct: 87 CKFYHSGAKCYQGDKCKFSH 106
>gi|426336831|ref|XP_004031658.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Gorilla
gorilla gorilla]
Length = 1189
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 273 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 329
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 330 CKFYHSGAKCYQGDNCKFSH 349
>gi|355565992|gb|EHH22421.1| hypothetical protein EGK_05682 [Macaca mulatta]
Length = 1188
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 272 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 328
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 329 CKFYHSGAKCYQGDNCKFSH 348
>gi|397466171|ref|XP_003804842.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Pan
paniscus]
Length = 1207
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 291 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 347
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 348 CKFYHSGAKCYQGDNCKFSH 367
>gi|355751579|gb|EHH55834.1| hypothetical protein EGM_05117 [Macaca fascicularis]
Length = 1188
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 272 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 328
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 329 CKFYHSGAKCYQGDNCKFSH 348
>gi|410258180|gb|JAA17057.1| zinc finger CCCH-type containing 6 [Pan troglodytes]
gi|410303266|gb|JAA30233.1| zinc finger CCCH-type containing 6 [Pan troglodytes]
Length = 1189
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 273 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 329
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 330 CKFYHSGAKCYQGDNCKFSH 349
>gi|410334299|gb|JAA36096.1| zinc finger CCCH-type containing 6 [Pan troglodytes]
Length = 1189
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 273 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 329
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 330 CKFYHSGAKCYQGDNCKFSH 349
>gi|109104224|ref|XP_001087547.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Macaca
mulatta]
Length = 1188
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 272 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 328
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 329 CKFYHSGAKCYQGDNCKFSH 348
>gi|355729873|gb|AES10012.1| zinc finger CCCH-type containing 6 [Mustela putorius furo]
Length = 1170
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 265 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 321
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 322 CKFYHSGAKCYQGDNCKFSH 341
>gi|426226562|ref|XP_004007410.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Ovis
aries]
Length = 1203
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 298 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 354
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 355 CKFYHSGAKCYQGDNCKFSH 374
>gi|156717216|ref|NP_848491.2| zinc finger CCCH domain-containing protein 6 [Mus musculus]
gi|148696278|gb|EDL28225.1| zinc finger CCCH type containing 6 [Mus musculus]
Length = 1177
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD CKF+HD L K + C ++ + C KG+NC + H S++P
Sbjct: 271 KGKQICKYFLEGRCIKGDHCKFNHDAE-LEKKKEVCKYYLQGYCTKGENCIYMH--SEFP 327
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GD C FSH
Sbjct: 328 CKFYHSGAKCYQGDKCKFSH 347
>gi|410035577|ref|XP_525863.4| PREDICTED: zinc finger CCCH domain-containing protein 6 [Pan
troglodytes]
Length = 1247
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 331 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 387
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 388 CKFYHSGAKCYQGDNCKFSH 407
>gi|332257254|ref|XP_003277724.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Nomascus
leucogenys]
Length = 1188
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 273 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 329
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 330 CKFYHSGAKCYQGDNCKFSH 349
>gi|403303869|ref|XP_003942541.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Saimiri
boliviensis boliviensis]
Length = 1190
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 274 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 330
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 331 CKFYHSGAKCYQGDNCKFSH 350
>gi|47117559|sp|Q8BYK8.2|ZC3H6_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 6
Length = 1177
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD CKF+HD L K + C ++ + C KG+NC + H S++P
Sbjct: 271 KGKQICKYFLEGRCIKGDHCKFNHDAE-LEKKKEVCKYYLQGYCTKGENCIYMH--SEFP 327
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GD C FSH
Sbjct: 328 CKFYHSGAKCYQGDKCKFSH 347
>gi|118766347|ref|NP_940983.2| zinc finger CCCH domain-containing protein 6 [Homo sapiens]
gi|332278115|sp|P61129.2|ZC3H6_HUMAN RecName: Full=Zinc finger CCCH domain-containing protein 6
Length = 1189
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 273 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 329
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 330 CKFYHSGAKCYQGDNCKFSH 349
>gi|358414296|ref|XP_582657.5| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6 [Bos taurus]
Length = 1213
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 308 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 364
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 365 CKFYHSGAKCYQGDNCKFSH 384
>gi|301777876|ref|XP_002924358.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Ailuropoda melanoleuca]
Length = 1220
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 314 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 370
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 371 CKFYHSGAKCYQGDNCKFSH 390
>gi|440909449|gb|ELR59358.1| Zinc finger CCCH domain-containing protein 6, partial [Bos
grunniens mutus]
Length = 1171
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ +++P
Sbjct: 265 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN-NEFP 322
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 323 CKFYHSGAKCYQGDNCKFSH 342
>gi|410955328|ref|XP_003984307.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6 [Felis catus]
Length = 1169
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 263 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 319
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 320 CKFYHSGAKCYQGDNCKFSH 339
>gi|359321589|ref|XP_532959.4| PREDICTED: zinc finger CCCH domain-containing protein 6 [Canis
lupus familiaris]
Length = 1180
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 277 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 333
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 334 CKFYHSGAKCYQGDNCKFSH 353
>gi|296223267|ref|XP_002757547.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Callithrix
jacchus]
Length = 1190
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 274 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 330
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 331 CKFYHSGAKCYQGDNCKFSH 350
>gi|157821021|ref|NP_001101242.1| zinc finger CCCH domain-containing protein 6 [Rattus norvegicus]
gi|149023250|gb|EDL80144.1| zinc finger CCCH type containing 6 (predicted) [Rattus norvegicus]
Length = 1180
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD CKF+HD L K + C ++ + C KG+NC + H S++P
Sbjct: 270 KGKQICKYFLEGRCIKGDHCKFNHDAE-LEKKKEVCKYYLQGYCTKGENCIYMH--SEFP 326
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GD C FSH
Sbjct: 327 CKFYHSGAKCYQGDKCKFSH 346
>gi|37360932|dbj|BAC98375.1| KIAA2035 protein [Homo sapiens]
gi|161612054|gb|AAI55541.1| ZC3H6 protein [Homo sapiens]
gi|187468976|gb|AAI67154.1| ZC3H6 protein [Homo sapiens]
Length = 1135
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 219 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 275
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 276 CKFYHSGAKCYQGDNCKFSH 295
>gi|338713923|ref|XP_001495641.2| PREDICTED: zinc finger CCCH domain-containing protein 6 [Equus
caballus]
Length = 1114
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 204 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 260
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 261 CKFYHSGAKCYQGDNCKFSH 280
>gi|34534836|dbj|BAC87128.1| unnamed protein product [Homo sapiens]
Length = 938
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 75 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 131
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 132 CKFYHSGAKCYQGDNCKFSH 151
>gi|297597051|ref|NP_001043380.2| Os01g0572100 [Oryza sativa Japonica Group]
gi|255673381|dbj|BAF05294.2| Os01g0572100, partial [Oryza sativa Japonica Group]
Length = 227
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 514 CMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSP 573
C+KGD+CP+DH+LSKYPC NF+ G C RGD C FSH +P E PS TP+ K S
Sbjct: 1 CLKGDDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAE----GPS--TPDAKKS- 53
Query: 574 PLYASNLLKPLN-NNKVSHQNVDALSNHGKVSSFKNIEQSVAKSIL-------KPPALAP 625
AS++ + N + S Q + + +S S+ K++ K P P
Sbjct: 54 --NASSVPEKANCQEQTSRQKTSTVYSGEPATSVPIKHHSILKNLAGISGNAQKVPVRIP 111
Query: 626 KGISYLFLGKS 636
+GI +L K+
Sbjct: 112 RGIQFLPFNKA 122
>gi|350581990|ref|XP_003124854.3| PREDICTED: zinc finger CCCH domain-containing protein 6 [Sus
scrofa]
Length = 1101
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 191 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 247
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 248 CKFYHSGAKCYQGDNCKFSH 267
>gi|47207919|emb|CAG05196.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1216
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK------- 528
C +Y++GRC GD C FSHD V L K + C + C + D+CP+ HD+ K
Sbjct: 198 CKYYIEGRCTWGDHCNFSHD-VDLPKKKELCKFYITGFCARADHCPYMHDILKCFSLIQI 256
Query: 529 ---YPCENFVAKGFCNRGDNCLFSHK 551
+PC+ F G C D C+FSH+
Sbjct: 257 QREFPCKLFHTTGNCVNNDECMFSHE 282
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 501 KSTKACC-HFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKL 552
K KA C ++ C GD+C F HD+ K C+ F GFC R D+C + H +
Sbjct: 192 KKGKAICKYYIEGRCTWGDHCNFSHDVDLPKKKELCK-FYITGFCARADHCPYMHDI 247
>gi|297480025|ref|XP_002707758.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6 [Bos taurus]
gi|296482845|tpg|DAA24960.1| TPA: suppressor of sable-like [Bos taurus]
Length = 1282
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 377 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 433
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GDNC FSH
Sbjct: 434 CKFYHSGAKCYQGDNCKFSH 453
>gi|410910570|ref|XP_003968763.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like
[Takifugu rubripes]
Length = 1378
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++GRC GD C FSHD V L K + C + C + D+CP+ H ++PC+ F
Sbjct: 385 CKYYIEGRCTWGDHCNFSHD-VDLPKKKELCKFYITGFCARADHCPYMH--GEFPCKLFH 441
Query: 536 AKGFCNRGDNCLFSHK 551
G C D C+FSH+
Sbjct: 442 TTGNCVNNDECMFSHE 457
>gi|47077349|dbj|BAD18563.1| unnamed protein product [Homo sapiens]
Length = 892
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++PC+ +
Sbjct: 256 CKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFPCKFYH 312
Query: 536 AKGFCNRGDNCLFSH 550
+ C +GDNC FSH
Sbjct: 313 SGAKCYQGDNCKFSH 327
>gi|344269381|ref|XP_003406531.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4-like [Loxodonta africana]
Length = 1363
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 452 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 508
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 509 TTGNCINGDDCMFSH 523
>gi|392346719|ref|XP_003749617.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Rattus
norvegicus]
Length = 1256
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD CKF+HD L K + C ++ + C KG+NC + H+ ++P
Sbjct: 346 KGKQICKYFLEGRCIKGDHCKFNHDAE-LEKKKEVCKYYLQGYCTKGENCIYMHN--EFP 402
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GD C FSH
Sbjct: 403 CKFYHSGAKCYQGDKCKFSH 422
>gi|441656346|ref|XP_003277707.2| PREDICTED: zinc finger CCCH domain-containing protein 4 [Nomascus
leucogenys]
Length = 1197
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 361 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 417
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 418 TTGNCINGDDCMFSH 432
>gi|148710148|gb|EDL42094.1| mCG2069 [Mus musculus]
Length = 1038
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H+ +PC+ +
Sbjct: 211 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYIHE-RDFPCKLYH 268
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 269 TTGNCINGDDCMFSH 283
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS---KYPCENFVAKGFCNRGDNCLFSHK 551
C +F C GD+C F HD+ K F GFC R +NC + H+
Sbjct: 211 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYIHE 259
>gi|345785598|ref|XP_854983.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4 [Canis lupus familiaris]
Length = 1251
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 368 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 424
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 425 TTGNCINGDDCMFSH 439
>gi|26333093|dbj|BAC30264.1| unnamed protein product [Mus musculus]
Length = 810
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+GRC +GD CKF+HD L K + C ++ + C KG+NC + H S++PC+ +
Sbjct: 276 CKYFLEGRCIKGDHCKFNHDAE-LEKKKEVCKYYLQGYCTKGENCIYMH--SEFPCKFYH 332
Query: 536 AKGFCNRGDNCLFSH 550
+ C +GD C FSH
Sbjct: 333 SGAKCYQGDKCKFSH 347
>gi|84996775|ref|XP_953109.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304105|emb|CAI76484.1| hypothetical protein, conserved [Theileria annulata]
Length = 250
Score = 72.8 bits (177), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 25/209 (11%)
Query: 429 RKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLP--------QNLKPKTVKYCHHYL 480
R+R S E A+ KQ+ + E+ + + RR +P K K+ C ++
Sbjct: 20 RRRKTRSNEAFARHKQR-YNEILERRKMIDDRRNDIPPPPVRYGRNEYKDKSKIICRYFY 78
Query: 481 K-GRCQEGDKCKFSHDTVPL-TKSTKACCHFARNS-CMK-GDNCPFDHDLSKYPCENFVA 536
+ G C +G+ C FSHD PL +K K C +F +N C K + C + H++ K+ C V
Sbjct: 79 RFGTCTKGESCIFSHDCTPLNSKDLKLCHYFVKNEGCKKTAEECKYSHEVHKFLCRQNVI 138
Query: 537 KGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELK---PSPPLYASNLLKPL-NNNKVSHQ 592
GFCN G NC F+H +P QD T +LK + L+ L N N ++ Q
Sbjct: 139 NGFCNLGGNCQFNH-MP---QDSIKRMDDTEKLKFCYNNKKFLVKALINFLINENWINPQ 194
Query: 593 NV----DALSNHGKVSSFKNIEQSVAKSI 617
++ D V+S+ NI + + K+I
Sbjct: 195 HIGVCDDVKGLTAIVTSYNNIPEKIIKTI 223
>gi|301775348|ref|XP_002923106.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4-like [Ailuropoda melanoleuca]
Length = 1228
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 357 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 413
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 414 TTGNCINGDDCMFSH 428
>gi|395751434|ref|XP_002829502.2| PREDICTED: zinc finger CCCH domain-containing protein 4 [Pongo
abelii]
Length = 1233
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 355 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 411
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 412 TTGNCINGDDCMFSH 426
>gi|348557694|ref|XP_003464654.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4-like [Cavia porcellus]
Length = 1306
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 396 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 452
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 453 TTGNCINGDDCMFSH 467
>gi|20521750|dbj|BAA83016.2| KIAA1064 protein [Homo sapiens]
Length = 1315
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 408 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 464
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 465 TTGNCINGDDCMFSH 479
>gi|397493264|ref|XP_003817530.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4 [Pan paniscus]
Length = 1262
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 355 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 411
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 412 TTGNCINGDDCMFSH 426
>gi|332856348|ref|XP_524315.3| PREDICTED: zinc finger CCCH domain-containing protein 4 [Pan
troglodytes]
Length = 1262
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 355 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 411
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 412 TTGNCINGDDCMFSH 426
>gi|392337471|ref|XP_002725579.2| PREDICTED: zinc finger CCCH domain-containing protein 4-like
[Rattus norvegicus]
Length = 1263
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 354 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 410
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 411 TTGNCINGDDCMFSH 425
>gi|291413326|ref|XP_002722929.1| PREDICTED: zinc finger CCCH-type containing 4 [Oryctolagus
cuniculus]
Length = 1277
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 370 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 426
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 427 TTGNCINGDDCMFSH 441
>gi|161169020|ref|NP_941033.2| zinc finger CCCH domain-containing protein 4 [Mus musculus]
Length = 1255
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 346 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 402
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 403 TTGNCINGDDCMFSH 417
>gi|37360214|dbj|BAC98085.1| mKIAA1064 protein [Mus musculus]
Length = 912
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 86 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 142
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 143 TTGNCINGDDCMFSH 157
>gi|410982740|ref|XP_003997706.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Felis
catus]
Length = 1278
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 368 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 424
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 425 TTGNCINGDDCMFSH 439
>gi|335289860|ref|XP_003127290.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4-like [Sus scrofa]
Length = 1254
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 349 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 405
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 406 TTGNCINGDDCMFSH 420
>gi|402906061|ref|XP_003915825.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Papio
anubis]
Length = 1303
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 396 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 452
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 453 TTGNCINGDDCMFSH 467
>gi|392343941|ref|XP_001053214.2| PREDICTED: zinc finger CCCH domain-containing protein 4-like
[Rattus norvegicus]
Length = 1255
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 346 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 402
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 403 TTGNCINGDDCMFSH 417
>gi|109125346|ref|XP_001109916.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like
[Macaca mulatta]
Length = 1303
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 396 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 452
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 453 TTGNCINGDDCMFSH 467
>gi|329663751|ref|NP_001192818.1| zinc finger CCCH domain-containing protein 4 [Bos taurus]
gi|296477578|tpg|DAA19693.1| TPA: zinc finger CCCH-type containing 4 [Bos taurus]
Length = 1303
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 394 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 450
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 451 TTGNCINGDDCMFSH 465
>gi|126723060|ref|NP_055983.1| zinc finger CCCH domain-containing protein 4 [Homo sapiens]
gi|94707996|sp|Q9UPT8.3|ZC3H4_HUMAN RecName: Full=Zinc finger CCCH domain-containing protein 4
gi|168269654|dbj|BAG09954.1| zinc finger CCCH domain-containing protein C19orf7 [synthetic
construct]
Length = 1303
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 396 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 452
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 453 TTGNCINGDDCMFSH 467
>gi|403299444|ref|XP_003940496.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Saimiri
boliviensis boliviensis]
Length = 1179
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 355 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 411
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 412 TTGNCINGDDCMFSH 426
>gi|94708083|sp|Q6ZPZ3.2|ZC3H4_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 4
Length = 1304
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 395 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 451
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 452 TTGNCINGDDCMFSH 466
>gi|426389358|ref|XP_004061090.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Gorilla
gorilla gorilla]
Length = 1303
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 396 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 452
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 453 TTGNCINGDDCMFSH 467
>gi|395854222|ref|XP_003799597.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Otolemur
garnettii]
Length = 1305
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 396 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 452
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 453 TTGNCINGDDCMFSH 467
>gi|354493805|ref|XP_003509030.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4-like [Cricetulus griseus]
Length = 1126
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 354 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 410
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 411 TTGNCINGDDCMFSH 425
>gi|426243994|ref|XP_004015822.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Ovis
aries]
Length = 1092
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 307 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 363
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 364 TTGNCINGDDCMFSH 378
>gi|432090579|gb|ELK23995.1| Zinc finger CCCH domain-containing protein 4 [Myotis davidii]
Length = 1258
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS------KY 529
C ++++GRC GD C FSHD + L K + C + C K +NCP+ H + +
Sbjct: 373 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCAKAENCPYMHAFALICRERDF 431
Query: 530 PCENFVAKGFCNRGDNCLFSH 550
PC+ + G C GD+C+FSH
Sbjct: 432 PCKLYHTTGNCINGDDCMFSH 452
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS---KYPCENFVAKGFCNRGDNCLFSHKL 552
C +F C GD+C F HD+ K F GFC + +NC + H
Sbjct: 373 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCAKAENCPYMHAF 422
>gi|338710212|ref|XP_001917161.2| PREDICTED: zinc finger CCCH domain-containing protein 4 [Equus
caballus]
Length = 1147
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 366 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 422
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 423 TTGNCINGDDCMFSH 437
>gi|334328711|ref|XP_001373157.2| PREDICTED: zinc finger CCCH domain-containing protein 4
[Monodelphis domestica]
Length = 1297
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC G+ C FSHD + L K + C + C + +NCP+ H +PC+ F
Sbjct: 370 CKYFVEGRCTWGEHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLFH 426
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 427 TTGNCINGDDCMFSH 441
>gi|395507706|ref|XP_003758162.1| PREDICTED: zinc finger CCCH domain-containing protein 6
[Sarcophilus harrisii]
Length = 1208
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 287 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKKKEICKFYIQGYCTKGENCIYMHN--EFP 343
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + C +GD C FSH
Sbjct: 344 CKFYHTGAKCYQGDKCKFSH 363
>gi|307203834|gb|EFN82770.1| Protein suppressor of sable [Harpegnathos saltator]
Length = 1213
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKY 529
P+T+ C +Y++G+C GD C FSH+ +P K + C + + C K + C + H +
Sbjct: 250 PETI--CLYYMQGKCHRGDDCPFSHNALPPRK-MELCKFYLMDCCAKREKCLYMH--QDF 304
Query: 530 PCENFVAKGFCNRGDNCLFSHK 551
PC+ F CN+GDNC FSH+
Sbjct: 305 PCKFFHTGLKCNQGDNCKFSHQ 326
>gi|417413604|gb|JAA53122.1| Putative polyadenylation factor i complex subunit yth1 cpsf
subunit, partial [Desmodus rotundus]
Length = 1177
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 265 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKKKEICKFYLQGYCTKGENCIYMHN--EFP 321
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GD C FSH
Sbjct: 322 CKFYHSGAKCYQGDKCKFSH 341
>gi|417413590|gb|JAA53115.1| Putative polyadenylation factor i complex subunit yth1 cpsf
subunit, partial [Desmodus rotundus]
Length = 1169
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 257 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKKKEICKFYLQGYCTKGENCIYMHN--EFP 313
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GD C FSH
Sbjct: 314 CKFYHSGAKCYQGDKCKFSH 333
>gi|350529443|ref|NP_001096202.2| zinc finger CCCH domain-containing protein 6 [Xenopus (Silurana)
tropicalis]
Length = 1023
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+ RC +GD+CKF HD + K + C + + C KGDNC + H+ ++P
Sbjct: 267 KGKQICKYFLEKRCIKGDQCKFDHDAE-IGKKREICKFYIQGYCTKGDNCLYMHN--EFP 323
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + C +GDNC FSH
Sbjct: 324 CKFYHTGAKCYQGDNCKFSH 343
>gi|432103062|gb|ELK30396.1| Zinc finger CCCH domain-containing protein 6 [Myotis davidii]
Length = 1248
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 346 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICRFYLQGYCTKGENCIYMHN--EFP 402
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GD C FSH
Sbjct: 403 CKFYHSGAKCYQGDKCKFSH 422
>gi|291386315|ref|XP_002709610.1| PREDICTED: zinc finger CCCH-type domain containing 6 [Oryctolagus
cuniculus]
Length = 1189
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 273 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHN--EFP 329
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + C +GD C FSH
Sbjct: 330 CKFYHTGAKCYQGDKCKFSH 349
>gi|134024349|gb|AAI35563.1| zc3h6 protein [Xenopus (Silurana) tropicalis]
Length = 1005
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+ RC +GD+CKF HD + K + C + + C KGDNC + H+ ++P
Sbjct: 249 KGKQICKYFLEKRCIKGDQCKFDHDAE-IGKKREICKFYIQGYCTKGDNCLYMHN--EFP 305
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + C +GDNC FSH
Sbjct: 306 CKFYHTGAKCYQGDNCKFSH 325
>gi|417413486|gb|JAA53067.1| Putative polyadenylation factor i complex subunit yth1 cpsf
subunit, partial [Desmodus rotundus]
Length = 1110
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 198 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKKKEICKFYLQGYCTKGENCIYMHN--EFP 254
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C +GD C FSH
Sbjct: 255 CKFYHSGAKCYQGDKCKFSH 274
>gi|383847983|ref|XP_003699632.1| PREDICTED: uncharacterized protein LOC100879098 [Megachile
rotundata]
Length = 1236
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 427 NKRKRSALSKEKKAKKKQKERKKRAE---KNRQLGVRRLKLPQNLKPKTVKYCHHYLKGR 483
NKR + ++ K ++ K +A +N + G R N P + C +Y++G+
Sbjct: 204 NKRSNTRGGVGRRGGKNERGGKNKARGQMRNDRNGRRNQNNDHNQDPDAI--CVYYMQGK 261
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRG 543
C GD C FSH+ +P K + C + + C K D C + H +PC+ F CN+G
Sbjct: 262 CHRGDDCPFSHNALPPRK-MELCKFYLMDCCAKRDKCLYMH--HDFPCKFFHTGLKCNQG 318
Query: 544 DNCLFSHK 551
+NC FSH+
Sbjct: 319 ENCKFSHQ 326
>gi|307174074|gb|EFN64761.1| Protein suppressor of sable [Camponotus floridanus]
Length = 1189
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++G+C GD C +SH+ +P K + C + + C K D C + H +PC+ F
Sbjct: 261 CVYYMQGKCHRGDDCPYSHNALPPRK-MELCKFYLMDCCAKRDKCLYMH--HDFPCKFFH 317
Query: 536 AKGFCNRGDNCLFSHK 551
CN+GDNC FSH+
Sbjct: 318 TGLRCNQGDNCKFSHQ 333
>gi|358335246|dbj|GAA31229.2| zinc finger CCCH domain-containing protein 6 [Clonorchis sinensis]
Length = 622
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 460 RRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN 519
+R K+ + KP C ++++GRC +GD C F+HD P TK + C +A C KG
Sbjct: 58 KRRKMERFTKPPMQAKCRYFMEGRCNKGDSCPFAHDFQP-TKKQELCKFYAVGVCSKGPT 116
Query: 520 CPFDHDLSKYPCENFVAKGFCNRGDNCLFSHK 551
C + H+ + PC+ + G C+ GD+C FSH+
Sbjct: 117 CLYLHE--EVPCKFYHFFGKCSHGDSCKFSHE 146
>gi|335892835|ref|NP_001229447.1| uncharacterized protein LOC100578262 [Apis mellifera]
Length = 1229
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 448 KKRAE-KNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKAC 506
K RA+ +N + G R N P + C +Y++G+C GD C FSH+ +P K + C
Sbjct: 227 KSRAQMRNDRNGRRNQNNDHNQDPDAI--CVYYMQGKCHRGDDCPFSHNALPPRK-MELC 283
Query: 507 CHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHK 551
+ + C K D C + H +PC+ F CN+G+NC FSH+
Sbjct: 284 KFYLMDCCAKRDKCLYMH--HDFPCKFFHTGLKCNQGENCKFSHQ 326
>gi|187607595|ref|NP_001120502.1| uncharacterized protein LOC100145628 [Xenopus (Silurana)
tropicalis]
gi|170284827|gb|AAI61391.1| LOC100145628 protein [Xenopus (Silurana) tropicalis]
Length = 1053
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC G+ C FSHD V + + C + C + +NCPF H+ +PC+ +
Sbjct: 48 CKYFVEGRCTWGEHCNFSHD-VEVPRRRGLCKFYVSGYCARAENCPFMHN--DFPCKLYH 104
Query: 536 AKGFCNRGDNCLFSHK 551
G C G++C+FSH+
Sbjct: 105 TTGNCINGEDCMFSHE 120
>gi|334312710|ref|XP_001382082.2| PREDICTED: zinc finger CCCH domain-containing protein 6
[Monodelphis domestica]
Length = 1201
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H+ ++P
Sbjct: 278 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKKKEICKFYIQGYCTKGENCIYMHN--EFP 334
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + C GD C FSH
Sbjct: 335 CKFYHTGAKCYLGDKCKFSH 354
>gi|224047526|ref|XP_002197235.1| PREDICTED: zinc finger CCCH domain-containing protein 6
[Taeniopygia guttata]
Length = 1204
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +G++CKF HD + K + C + + C KGDNC + H+ ++P
Sbjct: 283 KGKQICKYFLEGRCIKGEQCKFDHDAE-IEKKKEICKFYIQGYCTKGDNCIYLHN--EFP 339
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + C +GD C FSH
Sbjct: 340 CKFYHTGAKCYQGDKCKFSH 359
>gi|322784362|gb|EFZ11333.1| hypothetical protein SINV_01065 [Solenopsis invicta]
Length = 1182
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++G+C GD C FSH+ +P K + C + + C K D C + H +PC+ F
Sbjct: 254 CVYYMQGKCHRGDDCPFSHNALPPRK-MELCKFYLMDCCAKRDKCLYMH--HDFPCKFFH 310
Query: 536 AKGFCNRGDNCLFSHK 551
CN GDNC FSH+
Sbjct: 311 TGLKCNNGDNCKFSHQ 326
>gi|195540171|gb|AAI68044.1| LOC100145628 protein [Xenopus (Silurana) tropicalis]
Length = 1365
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC G+ C FSHD V + + C + C + +NCPF H+ +PC+ +
Sbjct: 360 CKYFVEGRCTWGEHCNFSHD-VEVPRRRGLCKFYVSGYCARAENCPFMHN--DFPCKLYH 416
Query: 536 AKGFCNRGDNCLFSHK 551
G C G++C+FSH+
Sbjct: 417 TTGNCINGEDCMFSHE 432
>gi|440901771|gb|ELR52657.1| Zinc finger CCCH domain-containing protein 4, partial [Bos
grunniens mutus]
Length = 1209
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 17/91 (18%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL--------- 526
C ++++GRC GD C FSHD + L K + C + C + +NCP+ HD+
Sbjct: 342 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMHDILWCPPLSEA 400
Query: 527 -------SKYPCENFVAKGFCNRGDNCLFSH 550
+PC+ + G C GD+C+FSH
Sbjct: 401 FALTCHVRDFPCKLYHTTGNCINGDDCMFSH 431
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS---KYPCENFVAKGFCNRGDNCLFSHKL 552
C +F C GD+C F HD+ K F GFC R +NC + H +
Sbjct: 342 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHDI 391
>gi|380024331|ref|XP_003695954.1| PREDICTED: uncharacterized protein LOC100868016 [Apis florea]
Length = 1230
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++G+C GD C FSH+ +P K + C + + C K D C + H +PC+ F
Sbjct: 255 CVYYMQGKCHRGDDCPFSHNALPPRK-MELCKFYLMDCCAKRDKCLYMH--HDFPCKFFH 311
Query: 536 AKGFCNRGDNCLFSHK 551
CN+G+NC FSH+
Sbjct: 312 TGLKCNQGENCKFSHQ 327
>gi|189409089|ref|NP_001121591.1| ziinc finger protein Ci-ZF(C3H)-7 [Ciona intestinalis]
gi|93003058|tpd|FAA00112.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 977
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 476 CHHYLKGRCQEGDKCKFSH---------DTVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
C + +G C +GDKC FSH + K + C ++A C+ GDNC + HD+
Sbjct: 224 CKFFREGHCTKGDKCGFSHHKASHRSRREYSKPKKVMELCQYYASGVCVHGDNCNYMHDI 283
Query: 527 SKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
+PC+ F + C GD+C FSH +P TP+T
Sbjct: 284 LFFPCKYFHSGTQCYNGDSCKFSH-------EPATPAT 314
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 469 KPKTV-KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDL 526
KPK V + C +Y G C GD C + HD + C +F + C GD+C F H+
Sbjct: 255 KPKKVMELCQYYASGVCVHGDNCNYMHDILFF-----PCKYFHSGTQCYNGDSCKFSHEP 309
Query: 527 SKYPCENFVAK 537
+ E + K
Sbjct: 310 ATPATEEIIKK 320
>gi|443708907|gb|ELU03826.1| hypothetical protein CAPTEDRAFT_223326 [Capitella teleta]
Length = 477
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 357 GTATMAIDPDRYNSMPGVGRNKRKASRGEEG-ISSFSASLDDSTVQKEVVKQRVTQEQGI 415
G DPD Y K R EEG I S+ S V +E + V +
Sbjct: 187 GVYDSPSDPDEYGP-------PHKMKRNEEGNIGQQHRSMM-SMVDEEYMDPNVAANE-- 236
Query: 416 TTKDKLDSGACNKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKY 475
++ D N S L K +K++ +++++ R R+L K +++ +
Sbjct: 237 -REEMFDRRKKNPPTASKLRKMEKSRHYREQQQMR----RELTKGEKKALKSMAEQQRPA 291
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C Y++G+C +G C+F+H P K + C + +SC KG +C + H S++PC
Sbjct: 292 CRFYMEGKCNKGYDCQFNHGFDP-PKKFEVCKFYISDSCTKGRDCLYVH--SEFPCRFHH 348
Query: 536 AKGFCNRGDNCLFSH 550
G+C RGDNC FSH
Sbjct: 349 KHGYCERGDNCKFSH 363
>gi|145481211|ref|XP_001426628.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393704|emb|CAK59230.1| unnamed protein product [Paramecium tetraurelia]
Length = 505
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCE 532
K C H+ KG C +G+KC + H L T+ C ++ C C + HDLSKY C+
Sbjct: 29 TKVCEHFKKGSCIKGNKCSYLHPKE-LQNVTRICKYYLGQGCQNSQQCQYSHDLSKYQCK 87
Query: 533 NFVAKGFCNRGDNCLFSHKL 552
F A C +G NC FSH L
Sbjct: 88 FFFAMSNC-KGQNCRFSHDL 106
>gi|326914753|ref|XP_003203687.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Meleagris gallopavo]
Length = 1206
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +G++CKF HD + K + C + + C KG+NC + H+ ++P
Sbjct: 282 KGKQICKYFLEGRCIKGEQCKFDHDAE-IEKKKEICKFYIQGYCTKGENCIYLHN--EFP 338
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + C +GD C FSH
Sbjct: 339 CKFYHTGAKCYQGDKCKFSH 358
>gi|313661358|ref|NP_001186379.1| zinc finger CCCH domain-containing protein 6 [Gallus gallus]
Length = 1206
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +G++CKF HD + K + C + + C KG+NC + H+ ++P
Sbjct: 282 KGKQICKYFLEGRCIKGEQCKFDHDAE-IEKKKEICKFYIQGYCTKGENCIYLHN--EFP 338
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + C +GD C FSH
Sbjct: 339 CKFYHTGAKCYQGDKCKFSH 358
>gi|146182371|ref|XP_001024479.2| MatE family protein [Tetrahymena thermophila]
gi|146143832|gb|EAS04234.2| MatE family protein [Tetrahymena thermophila SB210]
Length = 1361
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
KTV C KG C +G C FSHD + K C F NSC KGD+C F H L YP
Sbjct: 117 KTVP-CEFLKKGSCAKGADCTFSHD-FEVKKQNTICRFFLGNSCEKGDSCQFSHQLENYP 174
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + + C++ C FSH
Sbjct: 175 CKFYFTRE-CDKHTMCPFSH 193
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 503 TKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGF----CNRGDNCLFSHKL 552
T C + SC KG +C F HD + +N + + F C +GD+C FSH+L
Sbjct: 118 TVPCEFLKKGSCAKGADCTFSHDF-EVKKQNTICRFFLGNSCEKGDSCQFSHQL 170
>gi|332024910|gb|EGI65098.1| Protein suppressor of sable [Acromyrmex echinatior]
Length = 1195
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++G+C GD C +SH+ +P K + C + + C K D C + H +PC+ F
Sbjct: 270 CVYYMQGKCHRGDDCPYSHNALPPRK-MELCKFYLMDCCAKRDKCLYMH--HDFPCKFFH 326
Query: 536 AKGFCNRGDNCLFSHK 551
C++GDNC FSH+
Sbjct: 327 TGLKCSQGDNCKFSHQ 342
>gi|327284661|ref|XP_003227055.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Anolis carolinensis]
Length = 1179
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+ RC +GD+CKF HD + K + C + + C KG+NC + H+ ++P
Sbjct: 274 KGKQICKYFLEARCIKGDQCKFDHDAE-IEKKKEICKFYIQGYCTKGENCIYMHN--EFP 330
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + C GD C FSH
Sbjct: 331 CKFYHTGAKCYHGDKCKFSH 350
>gi|330792475|ref|XP_003284314.1| hypothetical protein DICPUDRAFT_75248 [Dictyostelium purpureum]
gi|325085767|gb|EGC39168.1| hypothetical protein DICPUDRAFT_75248 [Dictyostelium purpureum]
Length = 1273
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHD-TVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
C Y G C++G +C F H+ V + K T+ C F +C++G NC F HDL+ PC+ +
Sbjct: 1118 CSFYKIGMCKKGTECTFLHEGPVEIRKPTELCKFFKTGNCVRGANCTFSHDLTMEPCKFY 1177
Query: 535 VAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNL 580
+ C + C + H+L P PST +L SP L ++NL
Sbjct: 1178 NSPSGCTNTE-CQYGHRL---ITPPLNPSTSPVQLSNSPVLLSTNL 1219
>gi|350423962|ref|XP_003493646.1| PREDICTED: hypothetical protein LOC100744710 [Bombus impatiens]
Length = 1237
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++G+C GD C FSH+ +P K + C + + C K D C + H +PC+ F
Sbjct: 257 CVYYMQGKCHRGDDCPFSHNALPPRK-MELCKFYLMDCCAKRDKCLYMH--HDFPCKFFH 313
Query: 536 AKGFCNRGDNCLFSHK 551
C++G+NC FSH+
Sbjct: 314 TGLKCSQGENCKFSHQ 329
>gi|380805265|gb|AFE74508.1| zinc finger CCCH domain-containing protein 4, partial [Macaca
mulatta]
Length = 459
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 356 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 412
Query: 536 AKGFCNRGDNCLFSH 550
G C GD+C+FSH
Sbjct: 413 TTGNCINGDDCMFSH 427
>gi|340726374|ref|XP_003401534.1| PREDICTED: hypothetical protein LOC100649901 [Bombus terrestris]
Length = 1234
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++G+C GD C FSH+ +P K + C + + C K D C + H +PC+ F
Sbjct: 257 CVYYMQGKCHRGDDCPFSHNALPPRK-MELCKFYLMDCCAKRDKCLYMH--HDFPCKFFH 313
Query: 536 AKGFCNRGDNCLFSHK 551
C++G+NC FSH+
Sbjct: 314 TGLKCSQGENCKFSHQ 329
>gi|85719326|ref|NP_065619.2| zinc finger CCCH domain-containing protein 8 [Mus musculus]
gi|47117633|sp|Q9JJ48.2|ZC3H8_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 8;
AltName: Full=Fetal liver zinc finger protein 1
gi|29144956|gb|AAH48687.1| Zinc finger CCCH type containing 8 [Mus musculus]
gi|148696275|gb|EDL28222.1| zinc finger CCCH type containing 8 [Mus musculus]
Length = 305
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C ++ + C KG+NC + H S+YPC+ +
Sbjct: 211 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKYYVQGYCTKGENCLYLH--SEYPCKFYH 267
Query: 536 AKGFCNRGDNCLFSH 550
C +GD+C FSH
Sbjct: 268 TGTKCYQGDHCNFSH 282
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ +V +G+C +G+NCL+ H P
Sbjct: 206 KGKQVCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYV-QGYCTKGENCLYLHSEYP 262
>gi|449269255|gb|EMC80049.1| Zinc finger CCCH domain-containing protein 6, partial [Columba
livia]
Length = 1029
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +G++CKF HD + K + C + + C KG+NC + H +P
Sbjct: 253 KGKQICKYFLEGRCIKGEQCKFDHDAE-IEKKKEICKFYIQGYCTKGENCIYLH----FP 307
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C+ + C +GD C FSH
Sbjct: 308 CKFYHTGAKCYQGDKCKFSH 327
>gi|91087903|ref|XP_970676.1| PREDICTED: similar to AGAP011127-PA [Tribolium castaneum]
gi|270011940|gb|EFA08388.1| hypothetical protein TcasGA2_TC006035 [Tribolium castaneum]
Length = 962
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +L+G+CQ+ D C +SH+ VP K + C + ++ C KG+ C + H S++PC+ +
Sbjct: 249 CVFFLQGKCQKND-CPYSHEAVPPMK-LELCKFYLKDCCAKGEKCSYMH--SEFPCKLYH 304
Query: 536 AKGFCNRGDNCLFSHKLP 553
C +GDNC F+H P
Sbjct: 305 TGLVCVQGDNCKFAHGKP 322
>gi|8347090|gb|AAF74513.1|AF061961_1 putative zinc finger protein FLIZ1 [Mus musculus]
Length = 305
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C ++ + C KG+NC + H S+YPC+ +
Sbjct: 211 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKYYVQGYCTKGENCLYLH--SEYPCKFYH 267
Query: 536 AKGFCNRGDNCLFSH 550
C +GD+C FSH
Sbjct: 268 TGTKCYQGDHCNFSH 282
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ +V +G+C +G+NCL+ H P
Sbjct: 206 KGKQVCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYV-QGYCTKGENCLYLHSEYP 262
>gi|345489996|ref|XP_003426278.1| PREDICTED: hypothetical protein LOC100678781 [Nasonia vitripennis]
Length = 1364
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 448 KKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACC 507
K RA+ RR N P + C +Y++G+C GD C FSH+ +P K + C
Sbjct: 244 KNRAQMRNDRNGRRQGNDHNQDPDAI--CVYYMQGKCHRGDDCPFSHNALPPRK-MELCK 300
Query: 508 HFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHK 551
+ + C K D C + H +PC+ F C G+NC FSH+
Sbjct: 301 FYLMDCCAKRDKCLYMH--HDFPCKFFHTGLKCQAGENCKFSHQ 342
>gi|390369232|ref|XP_001187951.2| PREDICTED: uncharacterized protein LOC755007, partial
[Strongylocentrotus purpuratus]
Length = 962
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K+ YC Y + GRC GDKC + HD + C F R +C K D +CPF H S
Sbjct: 861 KSQPYCKFYNRYGRCHRGDKCPYIHD----PEKVAVCTQFLRGTCKKTDGSCPFSHKASK 916
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P + KG CNR D+C +SH
Sbjct: 917 DKMPVCVYFLKGVCNR-DDCPYSH 939
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 16/89 (17%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGD-KCKFSH----DTVPLTKSTKACCHFARNSCMKG 517
K P P+ V C +L+G C++ D C FSH D +P+ C +F + C +
Sbjct: 880 KCPYIHDPEKVAVCTQFLRGTCKKTDGSCPFSHKASKDKMPV------CVYFLKGVCNR- 932
Query: 518 DNCPFDH-DLSKYP--CENFVAKGFCNRG 543
D+CP+ H +SK C+ F+ G+C RG
Sbjct: 933 DDCPYSHVKVSKKAEVCQEFL-HGYCPRG 960
>gi|348558541|ref|XP_003465076.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like [Cavia
porcellus]
Length = 343
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
K C ++L+ +C +GD+CKF HDT + K + C + + C +G+NC + H+ +YPC+
Sbjct: 247 KVCKYFLERKCIKGDQCKFDHDT-EMEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKF 303
Query: 534 FVAKGFCNRGDNCLFSH 550
+ C +G++C FSH
Sbjct: 304 YHTGTKCYQGEHCRFSH 320
>gi|66817518|ref|XP_642612.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|60470760|gb|EAL68734.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 1657
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHD-TVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
C+ Y G C++G C F H+ V + K T+ C +F +SC KGD+C + HDL PC+ +
Sbjct: 1383 CNFYKIGMCKKGKDCTFIHEGPVEIRKPTEVCKYFKTSSCAKGDSCTYSHDLKIEPCKYY 1442
Query: 535 VAKGFCNRGDNCLFSHKL--PP 554
+ C NC + H+L PP
Sbjct: 1443 NSPTGCTNV-NCQYDHRLITPP 1463
>gi|115689577|ref|XP_785788.2| PREDICTED: uncharacterized protein LOC580648 [Strongylocentrotus
purpuratus]
Length = 1142
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K+ YC Y + GRC GDKC + HD + C F R +C K D +CPF H S
Sbjct: 858 KSQPYCKFYNRYGRCHRGDKCPYIHD----PEKVAVCTQFLRGTCKKTDGSCPFSHKASK 913
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P + KG CNR D+C +SH
Sbjct: 914 DKMPVCVYFLKGVCNR-DDCPYSH 936
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGD-KCKFSH----DTVPLTKSTKACCHFARNSCMKG 517
K P P+ V C +L+G C++ D C FSH D +P+ C +F + C +
Sbjct: 877 KCPYIHDPEKVAVCTQFLRGTCKKTDGSCPFSHKASKDKMPV------CVYFLKGVCNR- 929
Query: 518 DNCPFDH-DLSKYP--CENFVAKGFCNRGDNCLFSHKL 552
D+CP+ H +SK C+ F+ G+C RG C H L
Sbjct: 930 DDCPYSHVKVSKKAEVCQEFL-HGYCPRGAKCKNKHTL 966
>gi|255081837|ref|XP_002508137.1| predicted protein [Micromonas sp. RCC299]
gi|226523413|gb|ACO69395.1| predicted protein [Micromonas sp. RCC299]
Length = 314
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 14/88 (15%)
Query: 476 CHHYLKGRCQEGDKCKFSH------DTVPLTKSTKACCHFARNSCMKGDNCPFDHDL--- 526
C+ Y +G C GD C+F+H D+ P ++ C F R C +GD+C F HD
Sbjct: 194 CYAYQRGECTRGDACRFAHEEGGGGDSRPPSRGAPICYAFQRGECDRGDSCRFSHDANAS 253
Query: 527 ----SKYPCENFVAKGFCNRGDNCLFSH 550
S PC F KG C RGD C FSH
Sbjct: 254 TPQKSSAPCYAF-QKGECTRGDACRFSH 280
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLT--KSTKACCHFARNSCMKGDNCPFDHD-------L 526
C+ + +G C GD C+FSHD T KS+ C F + C +GD C F HD
Sbjct: 230 CYAFQRGECDRGDSCRFSHDANASTPQKSSAPCYAFQKGECTRGDACRFSHDPNAEAPQR 289
Query: 527 SKYPCENFVAKGFCNRGDNCLFSHK 551
S PC F +G C+RGD C FSH+
Sbjct: 290 SSAPCYAF-QRGECDRGDACRFSHE 313
>gi|390356014|ref|XP_003728683.1| PREDICTED: uncharacterized protein LOC100892284 [Strongylocentrotus
purpuratus]
Length = 1384
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 440 AKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKY--CHHYLKGRCQEGDKCKFSHDTV 497
AK K K R + A +G + K P+ + K + + C YL+GRC++G+ C +SHD
Sbjct: 297 AKLKGKGRGRGA-----IGPKPPKEPRGGEQKMMLHLICKFYLEGRCKKGENCTYSHD-- 349
Query: 498 PLTKSTKA--CCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
LT+ K C + C KGD C + H ++PC+ + + C +GD C FSH
Sbjct: 350 -LTQQRKQELCKFYVSGFCNKGDTCLYMH--GEFPCKYYHSGSECFQGDKCRFSH 401
>gi|401880929|gb|EJT45238.1| hypothetical protein A1Q1_06376 [Trichosporon asahii var. asahii
CBS 2479]
Length = 510
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 427 NKRKRSALSKEKKAKKKQKERKKR-AEKNRQLGV--RRLKLPQNLKPKTVKYCHHYLKGR 483
N ++ A++ +A ++ E+ KR + G R L P P + CH +LKG
Sbjct: 236 NLPEQQAVTDHPRASARRAEQAKRPCRYYTKTGRCERALTCPYQHIPDRLAICHQFLKGT 295
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGDNCPFDH------------------ 524
CQ GD C SH P +T +C F A +SC KGD C + H
Sbjct: 296 CQLGDNCPLSH--TPSAHNTPSCSRFQATSSCYKGDKCLYPHVRVADDAPVCEAFAREGW 353
Query: 525 ---------DLSKYPCENFVAKGFCNRGDNCLFSHKL 552
+L + C + AKG C+RG C H L
Sbjct: 354 CDTPAGTCPELHIWECPEWHAKGTCSRGRKCGLRHVL 390
>gi|406697187|gb|EKD00453.1| hypothetical protein A1Q2_05290 [Trichosporon asahii var. asahii
CBS 8904]
Length = 570
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 57/146 (39%), Gaps = 30/146 (20%)
Query: 435 SKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSH 494
S+ + +Q +R R R L P P + CH +LKG CQ GD C SH
Sbjct: 309 SRASARRAEQAKRPCRYYTKTGRCERALTCPYQHIPDRLAICHQFLKGTCQLGDNCPLSH 368
Query: 495 DTVPLTKSTKACCHF-ARNSCMKGDNCPFDH---------------------------DL 526
P +T +C F A +SC KGD C + H +L
Sbjct: 369 --TPSAHNTPSCSRFQATSSCYKGDKCIYPHVRVADDAPVCEAFAREGWCDKPAGTCPEL 426
Query: 527 SKYPCENFVAKGFCNRGDNCLFSHKL 552
+ C + AKG C+RG C H L
Sbjct: 427 HFWECPEWHAKGTCSRGRKCGLRHVL 452
>gi|354471220|ref|XP_003497841.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like
[Cricetulus griseus]
gi|344248840|gb|EGW04944.1| Zinc finger CCCH domain-containing protein 8 [Cricetulus griseus]
Length = 306
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C ++ + C KG+NC + H+ +YPC+ +
Sbjct: 212 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKYYVQGYCTKGENCLYLHN--EYPCKFYH 268
Query: 536 AKGFCNRGDNCLFSH 550
C +GD+C FSH
Sbjct: 269 TGTKCYQGDHCNFSH 283
>gi|328773616|gb|EGF83653.1| hypothetical protein BATDEDRAFT_86049 [Batrachochytrium
dendrobatidis JAM81]
Length = 303
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPL-TKSTKACCHFARNSCMKGDNCPFDHDLS 527
KPK K C + +C++G +C FSHD +S + C HF NSC+ G CPF H L
Sbjct: 195 KPK--KPCVFWANNKCKQGSQCTFSHDGPGSDARSKQVCRHFKTNSCINGSQCPFSHTLK 252
Query: 528 KYPCENFVAK---GFCNRGDNCLFSH 550
PC F K G C +G+ C +SH
Sbjct: 253 DAPCVFFHFKQLNGGCLQGEQCPYSH 278
>gi|431909212|gb|ELK12802.1| Zinc finger CCCH domain-containing protein 4 [Pteropus alecto]
Length = 1291
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 14/88 (15%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP----- 530
C ++++GRC GD C FSHD + L K + C + C + +NCP+ HD+ +P
Sbjct: 389 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMHDILWHPRLTRG 447
Query: 531 --------CENFVAKGFCNRGDNCLFSH 550
+ G C GD+C+FSH
Sbjct: 448 GPELLSPVGHLYHTTGNCINGDDCMFSH 475
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS---KYPCENFVAKGFCNRGDNCLFSHKL 552
C +F C GD+C F HD+ K F GFC R +NC + H +
Sbjct: 389 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHDI 438
>gi|58865750|ref|NP_001012090.1| zinc finger CCCH domain-containing protein 8 [Rattus norvegicus]
gi|50927709|gb|AAH79122.1| Zinc finger CCCH type containing 8 [Rattus norvegicus]
gi|149023249|gb|EDL80143.1| rCG27247 [Rattus norvegicus]
Length = 305
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C ++ + C KG+NC + H+ +YPC+ +
Sbjct: 211 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKYYVQGYCTKGENCLYLHN--EYPCKFYH 267
Query: 536 AKGFCNRGDNCLFSH 550
C +GD+C FSH
Sbjct: 268 TGTKCYQGDHCNFSH 282
>gi|328876721|gb|EGG25084.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 925
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
K KTV C++Y +G C +GD+C F H+ K + C F SC KG +CPF HD
Sbjct: 634 KEKTV-LCNYYKQGACTKGDECTFIHEGPVHDKKMELCKFFKGGSCFKGTDCPFSHDPKV 692
Query: 529 YPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C+ F + C + C + H + PP ST
Sbjct: 693 VACKYFNSPSGCTNTE-CPYGHFFSQQSTTPPQQST 727
>gi|410955330|ref|XP_003984308.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Felis
catus]
Length = 304
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 211 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 267
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +GD C FSH P TP T
Sbjct: 268 TGTKCYQGDYCKFSH-------APLTPET 289
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 206 KGKQVCKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 262
>gi|159487086|ref|XP_001701566.1| hypothetical zinc finger protein [Chlamydomonas reinhardtii]
gi|158271507|gb|EDO97324.1| hypothetical zinc finger protein [Chlamydomonas reinhardtii]
Length = 519
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 45/106 (42%), Gaps = 27/106 (25%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPL----TKSTKACCHFARNSCMKGDNCPFDHDLSK 528
+ C + KG C GDKCK+SHD + +K C + RN C +G C F HDLS
Sbjct: 110 AQICFDFTKGVCSRGDKCKYSHDLATIVHFNSKEKGICFDYLRNQCHRGLLCRFSHDLSN 169
Query: 529 YP----------------------CENFVAKGFCNRGDNCLFSHKL 552
C +FV KG C RG C +SH L
Sbjct: 170 IAQQCQVNNGVARGPAQGAKPNAICYDFV-KGVCQRGAECRYSHDL 214
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 33/109 (30%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLT-----------------KSTKACCHFARNSCMKGD 518
C YL+ +C G C+FSHD + K C F + C +G
Sbjct: 147 CFDYLRNQCHRGLLCRFSHDLSNIAQQCQVNNGVARGPAQGAKPNAICYDFVKGVCQRGA 206
Query: 519 NCPFDHDLSKYP---------------CENFVAKGFCNRGDNCLFSHKL 552
C + HDLS C +++ +G CNRG C +SH +
Sbjct: 207 ECRYSHDLSLIARMARGGSAQPKAGEVCYDYL-RGRCNRGATCKYSHNI 254
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 20/104 (19%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLT----------KSTKACCHFARNSCM 515
Q KP + C+ ++KG CQ G +C++SHD + K+ + C + R C
Sbjct: 186 QGAKPNAI--CYDFVKGVCQRGAECRYSHDLSLIARMARGGSAQPKAGEVCYDYLRGRCN 243
Query: 516 KGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDP 559
+G C + H+++ A GF N + S +P Q P
Sbjct: 244 RGATCKYSHNIAF-----LAAPGFLG---NAMSSDGVPMAAQAP 279
>gi|226482472|emb|CAX73835.1| Zinc finger CCCH domain-containing protein [Schistosoma japonicum]
Length = 686
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
+P + C +Y+ GRC +G C F HD VP K + C +A C K C + H +
Sbjct: 130 RPNSQSRCRYYMDGRCSKGSSCPFLHDFVP-AKKHELCKFYAVGMCSKESACSYLH--GE 186
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+PC+ F C+ GD+C FSH
Sbjct: 187 FPCKFFHLTNDCHHGDDCKFSH 208
>gi|338713971|ref|XP_001495266.3| PREDICTED: zinc finger CCCH domain-containing protein 8-like [Equus
caballus]
Length = 306
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 444 QKERKKRAEKNRQLGVRRLKLPQN-LKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKS 502
Q++ K EK +Q+ + + + Q+ ++ K + C ++L+ +C +GD+CKF HD + K
Sbjct: 180 QEQDGKPKEKQQQVRMSQAFINQHTVERKGKQICKYFLERKCIKGDQCKFDHD-AEIEKK 238
Query: 503 TKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
+ C + + C +G+NC + H+ +YPC+ + C +G+ C FSH
Sbjct: 239 KEMCKFYVQGYCTRGENCLYLHN--EYPCKFYHTGAKCYQGEYCKFSH 284
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 208 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 264
>gi|349603441|gb|AEP99279.1| Zinc finger CCCH domain-containing protein 8-like protein [Equus
caballus]
Length = 305
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 444 QKERKKRAEKNRQLGVRRLKLPQN-LKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKS 502
Q++ K EK +Q+ + + + Q+ ++ K + C ++L+ +C +GD+CKF HD + K
Sbjct: 179 QEQDGKPKEKQQQVRMSQAFINQHTVERKGKQICKYFLERKCIKGDQCKFDHD-AEIEKK 237
Query: 503 TKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
+ C + + C +G+NC + H+ +YPC+ + C +G+ C FSH
Sbjct: 238 KEMCKFYVQGYCTRGENCLYLHN--EYPCKFYHTGAKCYQGEYCKFSH 283
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 207 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 263
>gi|118371099|ref|XP_001018749.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila]
gi|89300516|gb|EAR98504.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila SB210]
Length = 1823
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 461 RLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDT-----VPLTKSTKACCHFARNSCM 515
+L+L N KT K C ++L C +GDKC ++H P K TK C FA+ C
Sbjct: 57 KLQLSNNAFHKT-KICPYFLNANCTKGDKCVYAHSQEELKEAPNLKKTKLCQMFAKGKCN 115
Query: 516 KGDNCPFDHDLSKYPCEN-F--------VAKGFCNRGDNCLFSH 550
G++C F H L + N F KG C GD+C ++H
Sbjct: 116 LGNHCSFAHGLEQLRSTNSFFKTTICVGFTKGSCQNGDSCRYAH 159
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 11/60 (18%)
Query: 503 TKACCHFARNSCMKGDNCPFDH---DLSKYP-------CENFVAKGFCNRGDNCLFSHKL 552
TK C +F +C KGD C + H +L + P C+ F AKG CN G++C F+H L
Sbjct: 68 TKICPYFLNANCTKGDKCVYAHSQEELKEAPNLKKTKLCQMF-AKGKCNLGNHCSFAHGL 126
>gi|345782013|ref|XP_540178.3| PREDICTED: zinc finger CCCH domain-containing protein 8 [Canis
lupus familiaris]
Length = 305
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 212 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 268
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 269 TGTKCYQGEYCKFSH-------SPLTPET 290
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 207 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 263
>gi|301777878|ref|XP_002924362.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like
[Ailuropoda melanoleuca]
Length = 305
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 212 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 268
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 269 TGTKCYQGEYCKFSH-------SPLTPET 290
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 207 KGKQVCKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 263
>gi|344291452|ref|XP_003417449.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like
[Loxodonta africana]
Length = 303
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD L K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 208 CKYFLERKCIKGDQCKFDHD-AELEKKKEMCKFYVQGYCNRGENCLYLHN--EYPCKFYH 264
Query: 536 AKGFCNRGDNCLFSH 550
C +G++C FSH
Sbjct: 265 TGAKCYQGEHCKFSH 279
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+CNRG+NCL+ H P
Sbjct: 203 KGKQICKYFLERKCIKGDQCKFDHDAELEKKKEMCK-FYVQGYCNRGENCLYLHNEYP 259
>gi|384495837|gb|EIE86328.1| hypothetical protein RO3G_11039 [Rhizopus delemar RA 99-880]
Length = 243
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++KG+C+ D C+F H+ + K C + SC KGD CPF H+L+ PC F
Sbjct: 69 CPLWIKGKCKNDDLCRFKHEG---PRDIKICQFYKAQSCTKGDQCPFSHELNLEPCRFFH 125
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
+ C +G+ C +SH DP TP +
Sbjct: 126 LQKTCEQGELCPYSH-------DPLTPES 147
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGDNCPFDHD--- 525
P+ +K C Y C +GD+C FSH+ + + C F + +C +G+ CP+ HD
Sbjct: 90 PRDIKICQFYKAQSCTKGDQCPFSHEL-----NLEPCRFFHLQKTCEQGELCPYSHDPLT 144
Query: 526 ------LSKY--PCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTP 567
L K PC + KG+C GD CLF+H +E+ ST TP
Sbjct: 145 PESLERLRKLTGPCRFWQFKGYCVTGDACLFAHDEISEEERKKLESTITP 194
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 479 YLKGRCQEGDKCKFSHDTVPLT-------KSTKACCHFA--RNSCMKGDNCPFDHD---- 525
+L+ C++G+ C +SHD PLT + C F + C+ GD C F HD
Sbjct: 125 HLQKTCEQGELCPYSHD--PLTPESLERLRKLTGPCRFWQFKGYCVTGDACLFAHDEISE 182
Query: 526 -------LSKYPCENFVAKGFCNRGDNCLFSH 550
+ PC + KG C GD+C + H
Sbjct: 183 EERKKLESTITPCIYYHLKGGCRSGDDCFYLH 214
>gi|115497070|ref|NP_001068759.1| zinc finger CCCH domain-containing protein 8 [Bos taurus]
gi|109658411|gb|AAI18121.1| Zinc finger CCCH-type containing 8 [Bos taurus]
gi|296482793|tpg|DAA24908.1| TPA: zinc finger CCCH-type containing 8 [Bos taurus]
Length = 303
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 210 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 266
Query: 536 AKGFCNRGDNCLFSH 550
C +G++C FSH
Sbjct: 267 TGAKCYQGEHCKFSH 281
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 506 CCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 210 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 261
>gi|402074044|gb|EJT69596.1| hypothetical protein GGTG_13212 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 930
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 47/103 (45%), Gaps = 21/103 (20%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSH--DTV----PLTKSTKACCHFARNSCMKGDNCPFD 523
PK +K CH++ G C G+ C+F+H D V L T+ C +FA C KG+ C F
Sbjct: 38 PKPIKPCHYFAAGHCAHGNSCRFAHSRDRVVAAEALPPKTEVCRYFAAGRCTKGEECRFA 97
Query: 524 H--------------DLSKYPCENFVAKGFCNRGDNCLFSHKL 552
H + PC +F A G C GD C F H L
Sbjct: 98 HVNRAGAQNKPTPEDPRKRVPC-HFFAVGGCRNGDACPFLHDL 139
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKY------ 529
C + +GRC G C F H+ P K K C +FA C G++C F H +
Sbjct: 14 CTFFARGRCTRGASCPFVHEVGPAPKPIKPCHYFAAGHCAHGNSCRFAHSRDRVVAAEAL 73
Query: 530 -----PCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
C F A G C +G+ C F+H Q+ PTP
Sbjct: 74 PPKTEVCRYFAA-GRCTKGEECRFAHVNRAGAQNKPTP 110
>gi|313222163|emb|CBY39153.1| unnamed protein product [Oikopleura dioica]
Length = 454
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 63/139 (45%), Gaps = 25/139 (17%)
Query: 459 VRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHD---------TVPLTKSTKACCHF 509
+R L P++ K KT + + G C G +C F HD +VP T+ C F
Sbjct: 251 LRPLVRPRHNKYKTEQCITFHTLGFCPYGVRCNFVHDKDEHRQAKHSVPSLYKTRLCRTF 310
Query: 510 A-RNSCMKGDNCPFDH-------DLSKYP------CENFVAKGFCNRGDNCLFSH-KLPP 554
R +C GD C F H D++K+P C +F G C GD C FSH + P
Sbjct: 311 IERGTCPYGDKCDFAHGTKDLSYDITKHPKYRTKLCRSFQDTGICVYGDRCCFSHVQSPH 370
Query: 555 KEQDPPTP-STCTPELKPS 572
+ PTP S TPE PS
Sbjct: 371 SKPHTPTPQSGATPEAPPS 389
>gi|402595017|gb|EJW88943.1| hypothetical protein WUBG_00143 [Wuchereria bancrofti]
Length = 817
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
+ C + +G C++GD C +SHD + + C + + C KG CP H +YPC+
Sbjct: 230 QICKFFREGYCRDGDSCSYSHDAADSGRKAELCKFYQQGFCKKGLQCPLLH--GEYPCKA 287
Query: 534 FVAKGFCNRGDNCLFSHKLP 553
F KG C++ D C FSH LP
Sbjct: 288 F-HKGECSK-DPCQFSH-LP 304
>gi|351697947|gb|EHB00866.1| Zinc finger CCCH domain-containing protein 4 [Heterocephalus
glaber]
Length = 1364
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL------SKY 529
C ++++GRC GD C FSHD + L K + C + C + ++CP+ HD+
Sbjct: 477 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAEHCPYMHDILCHWRQLLL 535
Query: 530 PCENFVAKGFCNRGDNCLFSH 550
+ G C GD+C+FSH
Sbjct: 536 LLWLYHTTGNCINGDDCMFSH 556
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS---KYPCENFVAKGFCNRGDNCLFSHKL 552
C +F C GD+C F HD+ K F GFC R ++C + H +
Sbjct: 477 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAEHCPYMHDI 526
>gi|344255600|gb|EGW11704.1| Zinc finger CCCH domain-containing protein 3 [Cricetulus griseus]
Length = 964
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 469 KPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDL 526
K K +YC +Y + GRC G++C + HD + C F R +C K D +CPF H +
Sbjct: 673 KEKKREYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGSCPFSHHV 728
Query: 527 S--KYPCENFVAKGFCNRGDNCLFSH 550
S K P ++ KG C+ NC +SH
Sbjct: 729 SKEKMPVCSYFLKGICS-NSNCPYSH 753
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C + C +SH V +++ + C F + C G C H L C +F
Sbjct: 736 CSYFLKGICSNSN-CPYSH--VYVSRKAEVCSDFLKGYCPLGAKCKKKHTLL---CPDFA 789
Query: 536 AKGFCNRGDNCLFSHK 551
+G C RG C H+
Sbjct: 790 RRGICPRGAQCQLLHR 805
>gi|281200485|gb|EFA74704.1| CCCH-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 1448
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C Y G C +GD+C F H+ K + C F SC+KG C F HDL PC+ F
Sbjct: 1161 CQFYKLGMCNKGDECTFKHEGPVPEKKIELCKFFKMGSCLKGSECTFSHDLKLDPCKFFN 1220
Query: 536 AKGFCNRGDNCLFSH 550
C D C + H
Sbjct: 1221 GPAGCTNKD-CPYGH 1234
>gi|397497396|ref|XP_003819497.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Pan
paniscus]
Length = 952
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC+ G++C + HD + C F R +C K D CPF H +S
Sbjct: 668 KRKEYCMYYNRFGRCKRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 724 EKMPVCSYFLKGICS-NSNCPYSH 746
>gi|354496742|ref|XP_003510484.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Cricetulus
griseus]
Length = 950
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 469 KPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDL 526
K K +YC +Y + GRC G++C + HD + C F R +C K D +CPF H +
Sbjct: 659 KEKKREYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGSCPFSHHV 714
Query: 527 S--KYPCENFVAKGFCNRGDNCLFSH 550
S K P ++ KG C+ NC +SH
Sbjct: 715 SKEKMPVCSYFLKGICS-NSNCPYSH 739
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C + C +SH V +++ + C F + C G C H L C +F
Sbjct: 722 CSYFLKGICSNSN-CPYSH--VYVSRKAEVCSDFLKGYCPLGAKCKKKHTLL---CPDFA 775
Query: 536 AKGFCNRGDNCLFSHK 551
+G C RG C H+
Sbjct: 776 RRGICPRGAQCQLLHR 791
>gi|197097906|ref|NP_001125487.1| zinc finger CCCH domain-containing protein 8 [Pongo abelii]
gi|55728208|emb|CAH90852.1| hypothetical protein [Pongo abelii]
Length = 291
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 197 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 253
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 254 TGTKCYQGEYCKFSHA-------PLTPET 275
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 192 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 248
>gi|335284940|ref|XP_003354736.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like [Sus
scrofa]
Length = 308
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 215 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 271
Query: 536 AKGFCNRGDNCLFSH 550
C +G+ C FSH
Sbjct: 272 TGAKCYQGEYCKFSH 286
>gi|355698264|gb|EHH28812.1| Zinc finger CCCH domain-containing protein 3 [Macaca mulatta]
gi|383416845|gb|AFH31636.1| zinc finger CCCH domain-containing protein 3 [Macaca mulatta]
Length = 950
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 668 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 724 EKMPVCSYFLKGICS-NSNCPYSH 746
>gi|395853713|ref|XP_003799348.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Otolemur
garnettii]
Length = 306
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 472 TVKY-----CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
TV+Y C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+
Sbjct: 203 TVEYKGKQICKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN- 260
Query: 527 SKYPCENFVAKGFCNRGDNCLFSH 550
+YPC+ + C +G+ C FSH
Sbjct: 261 -EYPCKFYHTGTKCYQGEYCKFSH 283
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 207 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 263
>gi|402879317|ref|XP_003903291.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Papio
anubis]
Length = 950
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 668 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 724 EKMPVCSYFLKGICS-NSNCPYSH 746
>gi|355729882|gb|AES10015.1| zinc finger CCCH-type containing 8 [Mustela putorius furo]
Length = 239
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 156 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 212
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 213 TGTKCYQGEYCKFSH-------SPLTPET 234
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 151 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 207
>gi|313235823|emb|CBY19807.1| unnamed protein product [Oikopleura dioica]
Length = 454
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 60/139 (43%), Gaps = 25/139 (17%)
Query: 459 VRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHD---------TVPLTKSTKACCHF 509
+R L P++ K KT + + G C G +C F HD +VP T+ C F
Sbjct: 251 LRPLVRPRHNKYKTEQCITFHTLGFCPYGVRCNFVHDKDEHRQAKHSVPSLYKTRLCRTF 310
Query: 510 A-RNSCMKGDNCPFDH-------DLSKYP------CENFVAKGFCNRGDNCLFSHKLPP- 554
R +C GD C F H D++K+P C +F G C GD C FSH P
Sbjct: 311 IERGTCPYGDKCDFAHGTKDLSYDITKHPKYRTKLCRSFQDTGICVYGDRCCFSHVQSPH 370
Query: 555 -KEQDPPTPSTCTPELKPS 572
K P S TPE PS
Sbjct: 371 SKPHTPSPQSGATPEAPPS 389
>gi|391330051|ref|XP_003739478.1| PREDICTED: uncharacterized protein LOC100900245 [Metaseiulus
occidentalis]
Length = 898
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++G+CQ+ D C FSH + TK T C + C+K NCPF H+ +PC+ +
Sbjct: 129 CKYYMEGKCQKSDDCPFSH-AIEQTKRTDLCRFYVSGHCIKR-NCPFMHE--DFPCKFYH 184
Query: 536 AKGFCNRGDNCLFSH 550
C +C +SH
Sbjct: 185 TGAPCFADKSCRYSH 199
>gi|297300217|ref|XP_001097060.2| PREDICTED: zinc finger CCCH domain-containing protein 3 [Macaca
mulatta]
Length = 940
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 668 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 724 EKMPVCSYFLKGICS-NSNCPYSH 746
>gi|426336829|ref|XP_004031657.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Gorilla
gorilla gorilla]
Length = 291
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 197 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 253
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 254 TGTKCYQGEYCKFSHA-------PLTPET 275
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 192 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 248
>gi|340372239|ref|XP_003384652.1| PREDICTED: hypothetical protein LOC100641586 [Amphimedon
queenslandica]
Length = 619
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 474 KYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KY 529
+YC +Y + GRC GD+C++ HD K C F R C D +CPF H++S K
Sbjct: 402 QYCLYYNRFGRCNRGDQCQYIHD----PKRIAICSKFLRGKCENIDGSCPFSHNISKEKM 457
Query: 530 PCENFVAKGFCNRGDNCLFSH 550
P +F +G C R DNC + H
Sbjct: 458 PVCSFFLRGVCTR-DNCPYLH 477
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD 525
N+ + + C +L+G C D C + H V + + + C F + C G++C H
Sbjct: 450 HNISKEKMPVCSFFLRGVCTR-DNCPYLH--VSVGPNAELCMDFIKGYCPLGEDCKKQHT 506
Query: 526 LSKYPCENFVAKGFCNRGD-NCLFSHKLPPKEQ 557
L+ C ++ G C RG +C H P +Q
Sbjct: 507 LT---CPDYSRTGTCPRGKRHCPLKHWRNPLKQ 536
>gi|296223265|ref|XP_002757546.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Callithrix
jacchus]
Length = 288
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 194 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 250
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 251 TGTKCYQGEYCKFSHA-------PLTPET 272
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 189 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 245
>gi|62822306|gb|AAY14855.1| unknown [Homo sapiens]
Length = 266
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 172 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 228
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 229 TGTKCYQGEYCKFSHA-------PLTPET 250
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 167 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 223
>gi|355779993|gb|EHH64469.1| Zinc finger CCCH domain-containing protein 3, partial [Macaca
fascicularis]
Length = 938
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 656 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 711
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 712 EKMPVCSYFLKGICS-NSNCPYSH 734
>gi|170588533|ref|XP_001899028.1| Zinc finger CCCH type domain containing protein 6. [Brugia malayi]
gi|158593241|gb|EDP31836.1| Zinc finger CCCH type domain containing protein 6., putative
[Brugia malayi]
Length = 755
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
+ C + +G C++GD C +SHD + + C + + C KG CP H +YPC+
Sbjct: 157 QICKFFREGYCRDGDSCSYSHDAADSGRKAELCKFYQQGFCKKGLQCPLLH--GEYPCKA 214
Query: 534 FVAKGFCNRGDNCLFSH 550
F KG C++ D C FSH
Sbjct: 215 F-HKGECSK-DPCQFSH 229
>gi|426224153|ref|XP_004006238.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Ovis
aries]
Length = 303
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 210 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 266
Query: 536 AKGFCNRGDNCLFSH 550
C +G+ C FSH
Sbjct: 267 TGAKCYQGEYCKFSH 281
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 506 CCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 210 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 261
>gi|402891922|ref|XP_003909177.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Papio
anubis]
Length = 295
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 201 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 257
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 258 TGTKCYQGEYCKFSHA-------PLTPET 279
>gi|217416362|ref|NP_115883.2| zinc finger CCCH domain-containing protein 8 [Homo sapiens]
gi|47117585|sp|Q8N5P1.2|ZC3H8_HUMAN RecName: Full=Zinc finger CCCH domain-containing protein 8
gi|119572488|gb|EAW52103.1| zinc finger CCCH-type containing 8 [Homo sapiens]
Length = 291
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 197 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 253
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 254 TGTKCYQGEYCKFSHA-------PLTPET 275
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 192 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 248
>gi|194215161|ref|XP_001917098.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Equus
caballus]
Length = 972
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + GRC+ G+ C + HD + C F R +C K D CPF H +S K P
Sbjct: 674 YCMYYNRFGRCKRGEGCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMP 729
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ NC +SH
Sbjct: 730 VCSYFLKGICS-NSNCPYSH 748
>gi|406865146|gb|EKD18189.1| Zinc finger CCCH type domain containing protein [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 358
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTV--PLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYPC 531
C YL+G C G KC H P + C H+ R C KG++C F H+ L K P
Sbjct: 142 CKAYLQGHCPLGPKCPDRHTAANNPSNYNNLVCKHWLRGLCKKGESCEFLHEYNLRKMPE 201
Query: 532 ENFVAK-GFCNRGDNCLFSHKLPPKEQDPPTP 562
NF AK G+C+ GD CL+ H L P + PP P
Sbjct: 202 CNFFAKNGYCSNGDECLYLH-LDPSSKLPPCP 232
>gi|119602655|gb|EAW82249.1| zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 962
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 682 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 737
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 738 EKMPVCSYFLKGICS-NSNCPYSH 760
>gi|114579567|ref|XP_515691.2| PREDICTED: zinc finger CCCH domain-containing protein 8 [Pan
troglodytes]
gi|397466167|ref|XP_003804840.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Pan
paniscus]
gi|410225688|gb|JAA10063.1| zinc finger CCCH-type containing 8 [Pan troglodytes]
gi|410252574|gb|JAA14254.1| zinc finger CCCH-type containing 8 [Pan troglodytes]
gi|410303494|gb|JAA30347.1| zinc finger CCCH-type containing 8 [Pan troglodytes]
gi|410329365|gb|JAA33629.1| zinc finger CCCH-type containing 8 [Pan troglodytes]
Length = 291
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 197 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 253
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 254 TGTKCYQGEYCKFSHA-------PLTPET 275
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 192 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 248
>gi|380817250|gb|AFE80499.1| zinc finger CCCH domain-containing protein 8 [Macaca mulatta]
Length = 295
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 201 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 257
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 258 TGTKCYQGEYCKFSHA-------PLTPET 279
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 196 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 252
>gi|109104222|ref|XP_001087431.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Macaca
mulatta]
gi|90080377|dbj|BAE89670.1| unnamed protein product [Macaca fascicularis]
Length = 295
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 201 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 257
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 258 TGTKCYQGEYCKFSHA-------PLTPET 279
>gi|155722994|ref|NP_055932.2| zinc finger CCCH domain-containing protein 3 [Homo sapiens]
gi|308153538|sp|Q8IXZ2.3|ZC3H3_HUMAN RecName: Full=Zinc finger CCCH domain-containing protein 3
Length = 948
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 668 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 724 EKMPVCSYFLKGICS-NSNCPYSH 746
>gi|168274410|dbj|BAG09625.1| zinc finger CCCH-type containing protein 3 [synthetic construct]
Length = 948
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 668 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 724 EKMPVCSYFLKGICS-NSNCPYSH 746
>gi|195995875|ref|XP_002107806.1| predicted protein [Trichoplax adhaerens]
gi|190588582|gb|EDV28604.1| predicted protein [Trichoplax adhaerens]
Length = 1110
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 444 QKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKST 503
Q+ RK++AE + ++ +KP C ++ +GRC +GD+C F+HD +P K
Sbjct: 368 QQSRKRQAEHEVKPRFQKRHKDNKMKPIPKVVCKYFQEGRCSKGDECTFAHDGIPSIKKR 427
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
+ C K C + + +PC+ F C GD C FSH
Sbjct: 428 QELC--------KSSVC-LNFFIQNFPCKFFHTNSTCYSGDKCKFSH 465
>gi|1469882|dbj|BAA09771.1| KIAA0150 [Homo sapiens]
Length = 944
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 664 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 719
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 720 EKMPVCSYFLKGICS-NSNCPYSH 742
>gi|410295430|gb|JAA26315.1| zinc finger CCCH-type containing 3 [Pan troglodytes]
Length = 952
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 668 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 724 EKMPVCSYFLKGICS-NSNCPYSH 746
>gi|410212978|gb|JAA03708.1| zinc finger CCCH-type containing 3 [Pan troglodytes]
gi|410265676|gb|JAA20804.1| zinc finger CCCH-type containing 3 [Pan troglodytes]
gi|410339641|gb|JAA38767.1| zinc finger CCCH-type containing 3 [Pan troglodytes]
Length = 952
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 668 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 724 EKMPVCSYFLKGICS-NSNCPYSH 746
>gi|332257252|ref|XP_003277723.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Nomascus
leucogenys]
Length = 294
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 200 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHN--EYPCKFYH 256
Query: 536 AKGFCNRGDNCLFSH 550
C +G+ C FSH
Sbjct: 257 TGTKCYQGEYCKFSH 271
>gi|403303867|ref|XP_003942540.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Saimiri
boliviensis boliviensis]
Length = 288
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 194 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGFCTRGENCLYLHN--EYPCKFYH 250
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 251 TGTKCYQGEYCKFSHA-------PLTPET 272
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +GFC RG+NCL+ H P
Sbjct: 189 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGFCTRGENCLYLHNEYP 245
>gi|332831304|ref|XP_519998.3| PREDICTED: zinc finger CCCH domain-containing protein 3 [Pan
troglodytes]
Length = 952
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 668 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 724 EKMPVCSYFLKGICS-NSNCPYSH 746
>gi|332263529|ref|XP_003280804.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Nomascus
leucogenys]
Length = 961
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + T+ C F R +C K D CPF H +S
Sbjct: 682 KRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTR-CLPFVRGTCKKTDETCPFSHHVSA 740
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
+ P ++ KG C+ NC +SH
Sbjct: 741 DRMPVCSYFLKGICS-NSNCPYSH 763
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C + C +SH V ++ + C F + C G C D+ C
Sbjct: 746 CSYFLKGICSNSN-CPYSHVYV--SRKAEVCSDFLKGYCPLGAKCEQGPDIL---CPMIC 799
Query: 536 AKGFCNRGDNCLFSHK 551
A+G C RG C H+
Sbjct: 800 ARGSCPRGPPCQLLHR 815
>gi|355565991|gb|EHH22420.1| hypothetical protein EGK_05681 [Macaca mulatta]
Length = 292
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 198 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYLQGYCTRGENCLYLHN--EYPCKFYH 254
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 255 TGTKCYQGEYCKFSHA-------PLTPET 276
>gi|324503865|gb|ADY41672.1| Zinc finger CCCH domain-containing protein 4 [Ascaris suum]
Length = 826
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
+ C + +G C++G+ C +SHD + + C + + C KG CP H +YPC+
Sbjct: 228 QICKFFREGYCRDGENCSYSHDAADSGRKPELCKFYQQGFCKKGLQCPLLH--GEYPCKA 285
Query: 534 FVAKGFCNRGDNCLFSH 550
F KG C+R D C FSH
Sbjct: 286 F-HKGECSR-DPCQFSH 300
>gi|13161145|gb|AAK13496.1|AF334161_1 zinc finger protein [Homo sapiens]
Length = 291
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H+ +YPC+ +
Sbjct: 197 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGFCSRGENCLYLHN--EYPCKFYH 253
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
C +G+ C FSH P TP T
Sbjct: 254 TGTKCYQGEYCQFSHA-------PLTPET 275
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +GFC+RG+NCL+ H P
Sbjct: 192 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGFCSRGENCLYLHNEYP 248
>gi|303285404|ref|XP_003061992.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456403|gb|EEH53704.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 418
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLT--KSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
C+ + KG C GD C+FSHD T +S+ C F + C +GD C F HD +
Sbjct: 333 CYAFQKGECTRGDSCRFSHDPNAQTPQRSSAPCYAFQKGECSRGDACRFSHDPNAVSGGG 392
Query: 534 FVA--------KGFCNRGDNCLFSHK 551
F A KG C RGD C FSH+
Sbjct: 393 FKASGTCYAFQKGECTRGDACRFSHE 418
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 19/99 (19%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKA-----------CCHFARNSCMKGD 518
P C+ + KG C GD C+FSH C F + C +GD
Sbjct: 286 PSAGPVCYAFQKGECTRGDSCRFSHGDAGGGGGGGGSWGGGGGGGAPCYAFQKGECTRGD 345
Query: 519 NCPFDHD-------LSKYPCENFVAKGFCNRGDNCLFSH 550
+C F HD S PC F KG C+RGD C FSH
Sbjct: 346 SCRFSHDPNAQTPQRSSAPCYAFQ-KGECSRGDACRFSH 383
>gi|440909450|gb|ELR59359.1| Zinc finger CCCH domain-containing protein 8 [Bos grunniens mutus]
Length = 318
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH----------- 524
C ++L+ +C +GD+CKF HD + K + C + + C +G+NC + H
Sbjct: 210 CKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKFYVQGYCTRGENCLYLHNRLKIFSSLTL 268
Query: 525 DLSKYPCENFVAKGFCNRGDNCLFSH 550
+L +YPC+ + C +G++C FSH
Sbjct: 269 ELHEYPCKFYHTGAKCYQGEHCKFSH 294
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 504 KACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSH 550
+ C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H
Sbjct: 208 QICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLH 257
>gi|426360955|ref|XP_004047693.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Gorilla
gorilla gorilla]
Length = 939
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 790 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 845
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 846 EKMPVCSYFLKGICS-NSNCPYSH 868
>gi|348555814|ref|XP_003463718.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cavia
porcellus]
Length = 957
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 469 KPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDL 526
K K +YC +Y + GRC G+ C + HD + C F R +C K D CPF H +
Sbjct: 669 KEKRKEYCMYYNRFGRCNRGELCPYIHD----PEKVAVCTRFLRGTCKKTDGTCPFSHHV 724
Query: 527 S--KYPCENFVAKGFCNRGDNCLFSH 550
S K P ++ KG CN NC +SH
Sbjct: 725 SKDKMPVCSYFLKGICN-NSNCPYSH 749
>gi|351698445|gb|EHB01364.1| Zinc finger CCCH domain-containing protein 3 [Heterocephalus
glaber]
Length = 934
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G+ C + HD + C F R +C K D CPF H +S
Sbjct: 655 KKKEYCMYYNRFGRCNRGEHCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 710
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG CN NC +SH
Sbjct: 711 DKMPVCSYFLKGICN-NSNCPYSH 733
>gi|431908098|gb|ELK11701.1| Zinc finger CCCH domain-containing protein 3 [Pteropus alecto]
Length = 966
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLS--KYP 530
YC +Y + GRC G++C + HD + C F R +C K D CPF H +S K P
Sbjct: 684 YCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMP 739
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ NC +SH
Sbjct: 740 VCSYFLKGICS-NSNCPYSH 758
>gi|403302962|ref|XP_003942117.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Saimiri
boliviensis boliviensis]
Length = 954
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K ++C +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 668 KKKEFCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 724 EKMPVCSYFLKGICS-NSNCPYSH 746
>gi|358415261|ref|XP_593664.4| PREDICTED: zinc finger CCCH domain-containing protein 3, partial
[Bos taurus]
Length = 885
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + GRC G++C + HD + C F R +C K D CPF H +S K P
Sbjct: 695 YCMYYNRFGRCNRGERCPYVHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMP 750
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ +C +SH
Sbjct: 751 VCSYFLKGICS-NSSCPYSH 769
>gi|359072164|ref|XP_002692636.2| PREDICTED: zinc finger CCCH domain-containing protein 3 [Bos
taurus]
Length = 947
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + GRC G++C + HD + C F R +C K D CPF H +S K P
Sbjct: 695 YCMYYNRFGRCNRGERCPYVHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMP 750
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ +C +SH
Sbjct: 751 VCSYFLKGICS-NSSCPYSH 769
>gi|296480814|tpg|DAA22929.1| TPA: hypothetical protein BOS_13733 [Bos taurus]
Length = 933
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + GRC G++C + HD + C F R +C K D CPF H +S K P
Sbjct: 681 YCMYYNRFGRCNRGERCPYVHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMP 736
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ +C +SH
Sbjct: 737 VCSYFLKGICS-NSSCPYSH 755
>gi|393906226|gb|EJD74222.1| hypothetical protein LOAG_18433 [Loa loa]
Length = 836
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
+ C + +G C++G+ C +SHD + + C + + C KG CP H +YPC+
Sbjct: 246 QICKFFREGYCRDGESCSYSHDAADSGRKAELCKFYQQGFCKKGLQCPLLH--GEYPCKA 303
Query: 534 FVAKGFCNRGDNCLFSHKLP 553
F KG C++ D C FSH LP
Sbjct: 304 F-HKGECSK-DPCQFSH-LP 320
>gi|417413187|gb|JAA52939.1| Putative zinc finger ccch domain-containing protein 3, partial
[Desmodus rotundus]
Length = 940
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLS--KYP 530
YC +Y + GRC G+ C + HD + C F R +C K D CPF H +S K P
Sbjct: 651 YCMYYNRFGRCNRGEHCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHQVSKEKMP 706
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ NC +SH
Sbjct: 707 VCSYFLKGICS-NSNCPYSH 725
>gi|149028482|gb|EDL83867.1| rCG64172 [Rattus norvegicus]
Length = 196
Score = 59.7 bits (143), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
KTV C H+L+G C++GD+C+F H +TK + C+F N C G C + H +
Sbjct: 46 KTV-VCQHWLRGLCKKGDQCEFLH-KYDITKMLE--CYFYSNFCKHGPLCRYQHT-RRVL 100
Query: 531 CENFVAKGFCNRGDNCLFSH---KLPPKEQDP-PTPSTCTPELKPSP 573
C N++ GFC G +C F H +LP +P P P P K P
Sbjct: 101 CVNYLV-GFCPGGASCKFIHPRFELPMGTIEPSPLPQQTQPRTKGVP 146
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG ++L P ++ C ++K C +G C F H + + T C H+ R C
Sbjct: 3 QQLGAQQLSFP-SMDKSGAAVCEFFVKAACGKGGMCPFCHIS---GEKTVVCQHWLRGLC 58
Query: 515 MKGDNCPFDH--DLSKYPCENFVAKGFCNRGDNCLFSH 550
KGD C F H D++K E + FC G C + H
Sbjct: 59 KKGDQCEFLHKYDITKM-LECYFYSNFCKHGPLCRYQH 95
>gi|395860130|ref|XP_003802368.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Otolemur
garnettii]
Length = 963
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + GRC G+ C + HD + C F R +C K D CPF H +S K P
Sbjct: 684 YCMYYNRFGRCNRGELCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMP 739
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ NC +SH
Sbjct: 740 VCSYFLKGICS-NSNCPYSH 758
>gi|312073087|ref|XP_003139362.1| zinc finger CCCH type domain-containing protein 6 [Loa loa]
Length = 628
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
+ C + +G C++G+ C +SHD + + C + + C KG CP H +YPC+
Sbjct: 38 QICKFFREGYCRDGESCSYSHDAADSGRKAELCKFYQQGFCKKGLQCPLLH--GEYPCKA 95
Query: 534 FVAKGFCNRGDNCLFSH 550
F KG C++ D C FSH
Sbjct: 96 F-HKGECSK-DPCQFSH 110
>gi|367052203|ref|XP_003656480.1| hypothetical protein THITE_2057738 [Thielavia terrestris NRRL 8126]
gi|347003745|gb|AEO70144.1| hypothetical protein THITE_2057738 [Thielavia terrestris NRRL 8126]
Length = 281
Score = 59.7 bits (143), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 14/110 (12%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLT----------KSTKACCHFARNSCM 515
Q+ P C YL G C +C H T T + C H+ R C
Sbjct: 44 QHSLPPDRPICKAYLAGNCPLKSRCPDRHATSAATAPGGGGGGGGFGSLVCKHWLRGLCK 103
Query: 516 KGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
KG+ C F H+ L K P C FV G+C+ GD CL+ H + P + PP P
Sbjct: 104 KGETCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLH-IDPSSRLPPCP 152
>gi|426235999|ref|XP_004011962.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 3 [Ovis aries]
Length = 924
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLS--KYP 530
YC +Y + GRC G++C + HD + C F R +C K D CPF H +S K P
Sbjct: 691 YCMYYNRFGRCNRGERCPYVHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMP 746
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ +C +SH
Sbjct: 747 VCSYFLKGICS-NSSCPYSH 765
>gi|26006471|ref|NP_742119.1| zinc finger CCCH domain-containing protein 3 [Mus musculus]
gi|47117561|sp|Q8CHP0.1|ZC3H3_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 3
gi|25137105|emb|CAD56773.1| hypothetical KIAA0150 protein [Mus musculus]
gi|38511401|gb|AAH60682.1| Zinc finger CCCH type containing 3 [Mus musculus]
gi|74209796|dbj|BAE23611.1| unnamed protein product [Mus musculus]
Length = 950
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 469 KPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDL 526
K K +YC +Y + GRC G+ C + HD + C F R +C K D +CPF H +
Sbjct: 661 KEKKREYCMYYNRFGRCNRGECCPYIHD----PEKVAVCTRFVRGTCKKTDGSCPFSHHV 716
Query: 527 S--KYPCENFVAKGFCNRGDNCLFSH 550
S K P ++ KG C+ NC +SH
Sbjct: 717 SKEKMPVCSYFLKGICS-NSNCPYSH 741
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C + C +SH V +++ + C F + C G C H L C +F
Sbjct: 724 CSYFLKGICSNSN-CPYSH--VYVSRKAEVCSDFLKGYCPLGAKCKKKHTLL---CPDFA 777
Query: 536 AKGFCNRGDNCLFSHK 551
+G C RG C H+
Sbjct: 778 RRGICPRGSQCQLLHR 793
>gi|198442899|ref|NP_001128337.1| zinc finger CCCH domain-containing protein 3 [Rattus norvegicus]
Length = 952
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 469 KPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDL 526
K K +YC +Y + GRC G+ C + HD + C F R +C K D +CPF H +
Sbjct: 662 KEKKREYCMYYNRFGRCNRGECCPYIHD----PEKVAVCTRFVRGTCKKTDGSCPFSHHV 717
Query: 527 S--KYPCENFVAKGFCNRGDNCLFSH 550
S K P ++ KG C+ NC +SH
Sbjct: 718 SKEKMPVCSYFLKGICS-NSNCPYSH 742
>gi|328871096|gb|EGG19467.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 286
Score = 59.3 bits (142), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYP-CE 532
C +LKG C +G C F H T+ C H+ R C KGD C F H DL+K P C
Sbjct: 59 CRFFLKGNCTKGPDCPFKHTK---TEHAVVCKHWLRGLCKKGDLCEFLHEYDLAKMPECY 115
Query: 533 NFVAKGFCNRGDNCLFSHKLPPKEQDP 559
F GFC G C + H PK + P
Sbjct: 116 FFSKYGFCPEGPKCKYGH---PKWEVP 139
Score = 40.4 bits (93), Expect = 4.2, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 499 LTKSTKACCHFARNSCMKGDNCPFDHDLSKYP--CENFVAKGFCNRGDNCLFSHK 551
+ S + C F + +C KG +CPF H +++ C++++ +G C +GD C F H+
Sbjct: 52 IDNSGEICRFFLKGNCTKGPDCPFKHTKTEHAVVCKHWL-RGLCKKGDLCEFLHE 105
>gi|357619357|gb|EHJ71967.1| hypothetical protein KGM_20353 [Danaus plexippus]
Length = 1174
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y++G+C +GD C +SHD P K + C + C K D C + H + +PC+ +
Sbjct: 224 CLYYMQGKCHKGDDCVYSHDAQPPRK-MELCKFYLMECCAKRDKCLYMH--ADFPCKYYH 280
Query: 536 AKGFCNRGDNCLFSHKLP 553
C D C F+H P
Sbjct: 281 TGLPCIYKDECKFAHGKP 298
>gi|308800704|ref|XP_003075133.1| Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit)
(ISS) [Ostreococcus tauri]
gi|116061687|emb|CAL52405.1| Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit)
(ISS) [Ostreococcus tauri]
Length = 401
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 466 QNLKPK--TVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
Q KP +VK C +L+G C++GD C F H+ P S + C FAR C G CPF
Sbjct: 216 QEKKPSGDSVKVCRFWLQGGCRKGDACDFKHEAGP--NSDQRCRFFARGRCKAGKRCPFR 273
Query: 524 HDL 526
HD+
Sbjct: 274 HDI 276
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 498 PLTKSTKACCHFARNSCMKGDNCPFDHDL---SKYPCENFVAKGFCNRGDNCLFSHKL 552
P S K C + + C KGD C F H+ S C F A+G C G C F H +
Sbjct: 220 PSGDSVKVCRFWLQGGCRKGDACDFKHEAGPNSDQRC-RFFARGRCKAGKRCPFRHDI 276
>gi|270002662|gb|EEZ99109.1| hypothetical protein TcasGA2_TC005002 [Tribolium castaneum]
Length = 258
Score = 58.9 bits (141), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPL-----TKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
C H+L+G C++GD+C+F + P K C + R C G +C H + +
Sbjct: 69 CKHWLRGLCKKGDQCEF-YTKCPFLHIDPESKIKDCPWYDRGFCRHGPHCRHRH-VRRVL 126
Query: 531 CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYA----SNLLKPLNN 586
C N++A GFC G NC + H P+ + P P + K +P + + K ++
Sbjct: 127 CTNYLA-GFCPEGPNCKYVH---PRFELPAPPDQVQKDKKATPVIICHFCNEHGHKAIHC 182
Query: 587 NKVSHQNVDALSNHGK 602
NK++ N DAL++ +
Sbjct: 183 NKMNSDNRDALNDENR 198
>gi|449679922|ref|XP_004209452.1| PREDICTED: uncharacterized protein LOC101235045 [Hydra
magnipapillata]
Length = 1104
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 16/145 (11%)
Query: 415 ITTKDKLDSGACNKRKRSALSKEKKAKKKQKERKKRAEKNR-----QLGVRRLKLPQNLK 469
+T+ D+L NKR ++ + K + K +K+++EK + L R++++ + +
Sbjct: 877 MTSTDQLR----NKRMGDSIDGNQSLKDRTKPKKRKSEKQKVASRAYLDKRKVEIQREAE 932
Query: 470 PKTVKY---CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD 525
K C + K G C GD+C+FSH + + K + C + +C K +NC F H+
Sbjct: 933 KKAHDASLPCPFFKKKGFCDYGDQCRFSHK-IEIDKRIELCKFYVVGACRKENNCLFMHE 991
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
++PC + CN+G +C +SH
Sbjct: 992 --QWPCRFYHVLKSCNKGSSCKYSH 1014
>gi|326437098|gb|EGD82668.1| mRNA 3'-end-processing protein yth1 [Salpingoeca sp. ATCC 50818]
Length = 398
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDH--DLSKYP- 530
C +L+G C G C F H TK T+ C H+ C KGDNC F H DLSK P
Sbjct: 41 CKAFLQGTCTRGSLCPFRH-----TKPTRNVVCKHWINGLCRKGDNCDFLHIYDLSKMPE 95
Query: 531 CENFVAKGFCNRGDNCLFSHKLP 553
C F G C +G +CLF H P
Sbjct: 96 CHFFRNDGHCEKGKDCLFLHITP 118
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN--SCMKGDNCPFD 523
++ KP C H++ G C++GD C F H L+K + CHF RN C KG +C F
Sbjct: 58 RHTKPTRNVVCKHWINGLCRKGDNCDFLH-IYDLSKMPE--CHFFRNDGHCEKGKDCLFL 114
Query: 524 H--------DLSKYPCENFVAKGFCNRGDNCLFSHK 551
H D + Y +GFC G NC H+
Sbjct: 115 HITPEQRRRDCAWY------WRGFCKNGANCRLRHR 144
>gi|312377105|gb|EFR24020.1| hypothetical protein AND_11711 [Anopheles darlingi]
Length = 251
Score = 58.9 bits (141), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 37/124 (29%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------STKACCH 508
C H+L+G C++GD+C+F H+ +TK K C
Sbjct: 95 CKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSRFNACHNKECPFLHIDPESKIKDCPW 153
Query: 509 FARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLPP----KEQDPPT 561
+ R C G NC H + + C N++A GFC G C + H +LPP K+Q P
Sbjct: 154 YDRGFCRHGPNCRHRH-VRRVLCNNYLA-GFCPDGSECKYMHPRFELPPPPEIKDQTPKR 211
Query: 562 PSTC 565
P+TC
Sbjct: 212 PTTC 215
>gi|148699221|gb|EDL31168.1| mCG22112 [Mus musculus]
Length = 966
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 469 KPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDL 526
K K +YC +Y + GRC G+ C + HD + C F R +C K D +CPF H +
Sbjct: 677 KEKKREYCMYYNRFGRCNRGECCPYIHD----PEKVAVCTRFVRGTCKKTDGSCPFSHHV 732
Query: 527 S--KYPCENFVAKGFCNRGDNCLFSH 550
S K P ++ KG C+ NC +SH
Sbjct: 733 SKEKMPVCSYFLKGICS-NSNCPYSH 757
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C + C +SH V +++ + C F + C G C H L C +F
Sbjct: 740 CSYFLKGICSNSN-CPYSH--VYVSRKAEVCSDFLKGYCPLGAKCKKKHTLL---CPDFA 793
Query: 536 AKGFCNRGDNCLFSHK 551
+G C RG C H+
Sbjct: 794 RRGICPRGSQCQLLHR 809
>gi|256070836|ref|XP_002571748.1| hypothetical protein [Schistosoma mansoni]
gi|353232995|emb|CCD80350.1| hypothetical protein Smp_002820.3 [Schistosoma mansoni]
Length = 699
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y+ GRC +G C F HD P K + C +A C K C F H ++PC+ F
Sbjct: 148 CKYYMDGRCSKGGSCPFLHDFTP-AKKNELCKFYAVGMCSKESACSFLH--GEFPCKFFH 204
Query: 536 AKGFCNRGDNCLFSH 550
C+ G +C FSH
Sbjct: 205 LTNDCHHGSDCKFSH 219
>gi|451853678|gb|EMD66971.1| hypothetical protein COCSADRAFT_283486 [Cochliobolus sativus
ND90Pr]
Length = 255
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CE 532
C YL+G C +G KC H+ V + + C H+ R C KG+ C F H+ L + P C
Sbjct: 48 CKAYLQGHCPDGSKCPNKHN-VSSSYNNLVCKHWLRGLCKKGETCEFLHEYNLRRMPECS 106
Query: 533 NFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
+ C+ GD+CL+ H L P + P P
Sbjct: 107 YYARTQTCSNGDDCLYLH-LDPDAKRPSCP 135
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDH---DLSKYPC 531
C H+L+G C++G+ C+F H+ + C ++AR +C GD+C + H D + C
Sbjct: 77 CKHWLRGLCKKGETCEFLHEYN--LRRMPECSYYARTQTCSNGDDCLYLHLDPDAKRPSC 134
Query: 532 ENFVAKGFCNRGDNCLFSH 550
++ +GFC G +C H
Sbjct: 135 PHY-DRGFCPLGPHCALKH 152
>gi|295663621|ref|XP_002792363.1| mRNA 3'-end-processing protein yth1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279033|gb|EEH34599.1| mRNA 3'-end-processing protein yth1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 250
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-----------VPL-TKSTKACCHFARNSCMKGDNC 520
V C Y +G C G C H T +P T T C HF + C KG C
Sbjct: 43 VPVCKAYREGHCPLGPTCPDRHPTPSRISSATSPAIPASTHGTLVCKHFLKGLCKKGIKC 102
Query: 521 PFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
+ H+ L + P C+NF G+C GD CL+ H +P + + PP
Sbjct: 103 EYLHEYNLRRMPECQNFARTGYCPNGDECLYQH-VPEEAKVPP 144
>gi|355729867|gb|AES10010.1| zinc finger CCCH-type containing 3 [Mustela putorius furo]
Length = 858
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLS--KYP 530
YC +Y + GRC G +C + HD C F R +C K D CPF H +S K P
Sbjct: 644 YCMYYNRFGRCHHGQRCPYIHD----PDKVAVCTRFLRGTCKKTDGTCPFSHHVSKEKMP 699
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ NC +SH
Sbjct: 700 VCSYFLKGICS-NSNCPYSH 718
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCE 532
+ C ++LKG C + C +SH V ++ + C F + C G C H L C
Sbjct: 698 MPVCSYFLKGICSNSN-CPYSHVYV--SRKAEVCTDFLKGYCPLGAKCKKKHTLL---CP 751
Query: 533 NFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPP 574
+F +G C RG C H+ + PTP TPE +PP
Sbjct: 752 DFSRRGLCPRGAQCQLLHRSQKRLGRRPTP---TPEPGSAPP 790
>gi|225677852|gb|EEH16136.1| mRNA 3'-end-processing protein yth1 [Paracoccidioides brasiliensis
Pb03]
gi|226287412|gb|EEH42925.1| mRNA 3'-end-processing protein yth1 [Paracoccidioides brasiliensis
Pb18]
Length = 250
Score = 58.5 bits (140), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 46/105 (43%), Gaps = 20/105 (19%)
Query: 473 VKYCHHYLKGRCQEGDKC--------KFSHDTVPL----TKSTKACCHFARNSCMKGDNC 520
V C Y +G C G C + S T P T T C HF + C KG C
Sbjct: 43 VPVCKAYREGHCPLGPTCPDRHPTPSRISSATSPAISASTHGTLVCKHFLKGLCKKGIKC 102
Query: 521 PFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
+ H+ L + P C+NF G+C GD CL+ H KLPP E
Sbjct: 103 EYLHEYNLRRMPECQNFARTGYCPNGDECLYQHVPEEAKLPPCEH 147
>gi|24217449|gb|AAH38670.1| Zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 948
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLSK 528
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +SK
Sbjct: 668 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 723
Query: 529 ---YPCENFVAKGFCNRGDNCLFSH 550
C F+ KG C+ NC +SH
Sbjct: 724 EKMRVCSYFL-KGICS-NSNCPYSH 746
>gi|326434883|gb|EGD80453.1| hypothetical protein PTSG_11097 [Salpingoeca sp. ATCC 50818]
Length = 273
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 480 LKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGF 539
+ G C D C FSHD V + T+ C +F N+C KGD C + HDL + PC F G
Sbjct: 1 MHGACHR-DDCAFSHD-VEQERKTEVCKYFLANTCRKGDACLYSHDLKQLPCRYFFTVG- 57
Query: 540 CNRGDNCLFSHKLPPKEQ 557
C D C FSH EQ
Sbjct: 58 CTV-DACRFSHDPLTTEQ 74
>gi|229595569|ref|XP_001016748.3| hypothetical protein TTHERM_00191720 [Tetrahymena thermophila]
gi|225565829|gb|EAR96503.3| hypothetical protein TTHERM_00191720 [Tetrahymena thermophila
SB210]
Length = 396
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 15/83 (18%)
Query: 483 RCQEGDKCKFSHDTV-----PLTKSTKACCHFARNSCMKGDNCPFDH---DLSKYP---- 530
+C++GDKC ++H V P K TK C F C KGD+C F H +L Y
Sbjct: 167 QCKKGDKCGYAHTQVELREPPNLKKTKLCQLFKTTRCNKGDSCDFAHGTEELKSYVDRYK 226
Query: 531 ---CENFVAKGFCNRGDNCLFSH 550
C+ F KG C GD C ++H
Sbjct: 227 TQICQQFTQKGSCQNGDKCHYAH 249
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 462 LKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK-----STKACCHFA-RNSCM 515
L+ P NLK K C + RC +GD C F+H T L T+ C F + SC
Sbjct: 183 LREPPNLK--KTKLCQLFKTTRCNKGDSCDFAHGTEELKSYVDRYKTQICQQFTQKGSCQ 240
Query: 516 KGDNCPFDH 524
GD C + H
Sbjct: 241 NGDKCHYAH 249
>gi|424513562|emb|CCO66184.1| predicted protein [Bathycoccus prasinos]
Length = 841
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHD-TVPLTKSTK------ACCHFARNSCMKGDNCPFDHDLSK 528
C+ Y KG C GD+CK+ HD ++P +K C FA+ C +GD+C F HD S
Sbjct: 567 CYAYAKGECFRGDRCKYWHDPSIPAPDRSKQIGEGGPCWAFAQGRCFRGDSCRFSHDPSI 626
Query: 529 YP 530
P
Sbjct: 627 LP 628
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 13/59 (22%)
Query: 504 KACCHFARNSCMKGDNCPFDHDLS------------KYPCENFVAKGFCNRGDNCLFSH 550
+ C +A+ C +GD C + HD S PC F A+G C RGD+C FSH
Sbjct: 565 RPCYAYAKGECFRGDRCKYWHDPSIPAPDRSKQIGEGGPCWAF-AQGRCFRGDSCRFSH 622
>gi|432855626|ref|XP_004068278.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Oryzias latipes]
Length = 862
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + G+C G C F HD C F R +C + D CPF H +S K P
Sbjct: 643 YCMYYNRFGKCNRGTSCTFIHD----PDKVAVCTRFLRGTCKREDGTCPFSHKVSKEKMP 698
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG CN D C +SH
Sbjct: 699 VCSYFLKGICNNSD-CPYSH 717
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C D C +SH V ++ + C F + C +G+ C H L C +F
Sbjct: 700 CSYFLKGICNNSD-CPYSH--VYVSSKAEVCEDFVKGYCPEGEKCKKKHTLV---CSDFF 753
Query: 536 AKGFCNRGDNCLFSHK 551
G C+RG C H+
Sbjct: 754 KTGSCSRGSRCKLQHR 769
>gi|167516060|ref|XP_001742371.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778995|gb|EDQ92609.1| predicted protein [Monosiga brevicollis MX1]
Length = 193
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C + GRCQ+G+ C FSH P C F N C KGD C + HD S +PC F
Sbjct: 118 CQFHQHGRCQKGEACPFSH-AEPQVHKQDLCKFFLSNDCKKGDACLYSHDPSLFPCR-FY 175
Query: 536 AKGFCNRGDNCLFSH 550
G C+R D C FSH
Sbjct: 176 HTGGCDRTD-CRFSH 189
>gi|405971141|gb|EKC35995.1| Zinc finger CCCH domain-containing protein 3 [Crassostrea gigas]
Length = 728
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 469 KPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--D 525
K + +YC Y + G+C GDKCK+ HD + C F R +C D CPF H D
Sbjct: 127 KKRAEQYCMFYNRFGKCNRGDKCKYRHD----PEKVAVCTRFLRGTCSIVD-CPFSHKVD 181
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
K P ++ +G C+R +NC + H
Sbjct: 182 KEKMPVCSYFLRGVCSR-ENCPYLH 205
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+G C + C + H V + K+ + C F + C KG C H L C+ F
Sbjct: 188 CSYFLRGVCSR-ENCPYLH--VKVNKNAEVCQDFLQGFCSKGAKCTKSHTLV---CQMFA 241
Query: 536 AKGFCNRGDNCLFSHK 551
A G C G C H+
Sbjct: 242 ATGSCPDGAKCKLQHR 257
>gi|350276194|ref|NP_001037949.3| zinc finger CCCH domain-containing protein 3 [Xenopus (Silurana)
tropicalis]
gi|62467681|gb|AAX84027.1| Smad-interacting and CPSF-like protein [Xenopus (Silurana)
tropicalis]
Length = 827
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + G+C G C F HD + C F R +C K D CPF H +S K P
Sbjct: 613 YCMYYNRFGKCNRGQNCPFIHD----PEKVAVCTRFLRGTCKKTDGTCPFSHKVSKDKMP 668
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ D C +SH
Sbjct: 669 VCSYFLKGICHNND-CPYSH 687
>gi|112419061|gb|AAI21895.1| zinc finger CCCH-type containing 3 [Xenopus (Silurana) tropicalis]
Length = 827
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + G+C G C F HD + C F R +C K D CPF H +S K P
Sbjct: 613 YCMYYNRFGKCNRGQNCPFIHD----PEKVAVCTRFLRGTCKKTDGTCPFSHKVSKDKMP 668
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ D C +SH
Sbjct: 669 VCSYFLKGICHNND-CPYSH 687
>gi|456753122|gb|JAA74103.1| zinc finger CCCH-type containing 3, partial [Sus scrofa]
Length = 843
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLS--KYP 530
YC +Y + GRC G C + HD + C F R +C K D CPF H +S K P
Sbjct: 663 YCMYYNRFGRCNRGQHCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMP 718
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ NC +SH
Sbjct: 719 VCSYFLKGICS-NSNCPYSH 737
>gi|345779548|ref|XP_539198.3| PREDICTED: zinc finger CCCH domain-containing protein 3 [Canis
lupus familiaris]
Length = 1024
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + GRC G+ C + HD C F R +C K D CPF H +S K P
Sbjct: 736 YCMYYNRFGRCNHGEHCPYIHD----PDKVAVCTRFLRGTCKKTDGTCPFSHHVSKEKMP 791
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ NC +SH
Sbjct: 792 VCSYFLKGICS-NSNCPYSH 810
>gi|134055063|emb|CAK43704.1| unnamed protein product [Aspergillus niger]
Length = 264
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTK----ACCHFARNSCMKGDNCPFDHD--L 526
V C Y +G C G C H T P ST C HF + C KG C + H+ L
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPT-PSPPSTTHGSLVCKHFLKGLCKKGLKCEYLHEYNL 102
Query: 527 SKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
+ P C++F G+C GD+CL+ H +LPP E
Sbjct: 103 RRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCEH 139
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLSKY---PC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 80 CKHFLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPC 137
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ +GFC G C H
Sbjct: 138 EHY-DRGFCELGPLCAKRH 155
>gi|171684565|ref|XP_001907224.1| hypothetical protein [Podospora anserina S mat+]
gi|170942243|emb|CAP67895.1| unnamed protein product [Podospora anserina S mat+]
Length = 428
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---DL 526
P V C +L G C GD C SHD P + T AC H+AR+SC K D C + H
Sbjct: 261 PHKVAICKDFLLGGCPNGDDCDLSHDPTP--ERTPACLHYARDSCTKSD-CKYAHVKVST 317
Query: 527 SKYPCENFVAKGFCNRGDNCLFSH 550
+ C +F G+C G C H
Sbjct: 318 AAPVCRSFGFYGYCEGGAECPERH 341
>gi|148697541|gb|EDL29488.1| mCG141533 [Mus musculus]
Length = 662
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + GRC G+ C + HD + C F R +C K D +CPF H +S K P
Sbjct: 379 YCMYYNRFGRCNRGECCPYIHD----PEKVAVCTRFVRGTCKKTDGSCPFSHHVSKEKMP 434
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ NC +SH
Sbjct: 435 VCSYFLKGICS-NSNCPYSH 453
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C + C +SH V +++ + C F + C G C H L C +F
Sbjct: 436 CSYFLKGICSNSN-CPYSH--VYVSRKAEVCSDFLKGYCPLGAKCKKKHTLL---CPDFA 489
Query: 536 AKGFCNRGDNCLFSHK 551
+G C RG C H+
Sbjct: 490 RRGICPRGSQCQLLHR 505
>gi|256070838|ref|XP_002571749.1| hypothetical protein [Schistosoma mansoni]
gi|353232996|emb|CCD80351.1| hypothetical protein Smp_002820.1 [Schistosoma mansoni]
Length = 586
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +Y+ GRC +G C F HD P K + C +A C K C F H ++PC+ F
Sbjct: 35 CKYYMDGRCSKGGSCPFLHDFTP-AKKNELCKFYAVGMCSKESACSFLH--GEFPCKFFH 91
Query: 536 AKGFCNRGDNCLFSH 550
C+ G +C FSH
Sbjct: 92 LTNDCHHGSDCKFSH 106
>gi|449495327|ref|XP_002187164.2| PREDICTED: zinc finger CCCH domain-containing protein 3
[Taeniopygia guttata]
Length = 1136
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + G+C G+ C + HD + C F R +C K D CPF H +S K P
Sbjct: 782 YCMYYNRFGKCNRGESCPYIHD----PEKVAVCTRFLRGTCKKTDGTCPFSHKVSKDKMP 837
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ NC +SH
Sbjct: 838 VCSYYLKGICS-NSNCPYSH 856
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +YLKG C + C +SH V +++ + C F + C G+ C H L C +F
Sbjct: 839 CSYYLKGICSNSN-CPYSH--VYVSRKAEVCQDFLKGYCPMGEKCKKKHTLV---CPDFA 892
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDP 559
KG C +G C H P K + P
Sbjct: 893 KKGVCPKGAQCKLLH--PQKRRHP 914
>gi|170085227|ref|XP_001873837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651389|gb|EDR15629.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 292
Score = 57.8 bits (138), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 34/163 (20%)
Query: 460 RRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHD------------------------ 495
R+L + + C H+L+G C++GD C+F H+
Sbjct: 79 RQLPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPECWWFAKYGYCSAGDEC 138
Query: 496 --TVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH--- 550
P + + C + R C G +CP H + K C+ ++ GFC G CL H
Sbjct: 139 LYAHPKERRVE-CPDYNRGFCKLGPSCPRKH-VRKVACQLYLT-GFCPLGPECLRGHPKP 195
Query: 551 KLPPKEQDPPTPSTCTPELKPSPPLYA--SNLLKPLNNNKVSH 591
LPP + P T +L P PP Y ++ + +N+ V+H
Sbjct: 196 DLPPAKAYEPLEPPSTRDLGPPPPGYGRYADFDRGMNSGPVAH 238
>gi|389745733|gb|EIM86914.1| hypothetical protein STEHIDRAFT_97798 [Stereum hirsutum FP-91666
SS1]
Length = 427
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 460 RRLKLPQNLKPKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD 518
R L P + C +L+G C D C SH+ P ++T C HFA N D
Sbjct: 197 RGLTCPYQHDESKIAICWPFLQGTCPHSADNCPLSHNPTP--ENTPLCVHFANNGRCNRD 254
Query: 519 NCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSH 550
NCPF H + P C +F GFC +G +C H
Sbjct: 255 NCPFPH-IRVGPRTGVCRDFAVLGFCGKGVDCEHQH 289
>gi|330934206|ref|XP_003304457.1| hypothetical protein PTT_17055 [Pyrenophora teres f. teres 0-1]
gi|311318917|gb|EFQ87453.1| hypothetical protein PTT_17055 [Pyrenophora teres f. teres 0-1]
Length = 256
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CE 532
C YL+G C +G++C H+ V + + C H+ R C KG+ C F H+ L + P C
Sbjct: 48 CKAYLQGHCPDGNRCPNKHN-VTSSYNNLVCKHWLRGLCKKGETCEFLHEYNLRRMPECS 106
Query: 533 NFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
+ C+ GD+CL+ H + P+ + P P
Sbjct: 107 YYARTQTCSNGDDCLYLH-IDPEAKRPSCP 135
Score = 48.1 bits (113), Expect = 0.020, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDH--DLSKYPCE 532
C H+L+G C++G+ C+F H+ + C ++AR +C GD+C + H +K P
Sbjct: 77 CKHWLRGLCKKGETCEFLHEYN--LRRMPECSYYARTQTCSNGDDCLYLHIDPEAKRPSC 134
Query: 533 NFVAKGFCNRGDNCLFSH 550
+GFC G +C H
Sbjct: 135 PHYDRGFCPLGPHCSLKH 152
>gi|357620390|gb|EHJ72601.1| hypothetical protein KGM_18449 [Danaus plexippus]
Length = 720
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---DLS 527
K V C ++KG C +G+ C SH+ TK C + R C K NCP+ H +
Sbjct: 552 KHVSLCRKFIKGICHDGN-CTLSHELS--TKKMPTCYFYLRGMCTK-QNCPYLHVKLNEK 607
Query: 528 KYPCENFVAKGFCNRGDNCLFSH 550
C++FV KG+C +GDNC F H
Sbjct: 608 TKICQDFV-KGYCEKGDNCPFRH 629
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 464 LPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
L L K + C+ YL+G C + + C + H V L + TK C F + C KGDNCPF
Sbjct: 572 LSHELSTKKMPTCYFYLRGMCTKQN-CPYLH--VKLNEKTKICQDFVKGYCEKGDNCPFR 628
Query: 524 H 524
H
Sbjct: 629 H 629
>gi|261196458|ref|XP_002624632.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Ajellomyces dermatitidis SLH14081]
gi|239595877|gb|EEQ78458.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Ajellomyces dermatitidis SLH14081]
gi|239609451|gb|EEQ86438.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Ajellomyces dermatitidis ER-3]
gi|327356997|gb|EGE85854.1| mRNA 3'-end-processing protein yth1 [Ajellomyces dermatitidis ATCC
18188]
Length = 251
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 473 VKYCHHYLKGRCQEGDKC--------KFSHDTVPL-----TKSTKACCHFARNSCMKGDN 519
V C Y +G C G C + S T P T T C HF + C KG
Sbjct: 43 VPVCKAYREGHCPLGPTCPDRHPTPSRLSSATSPAIAPSSTHGTLVCKHFLKGLCKKGIK 102
Query: 520 CPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C+NF G+C GD CL+ H K+PP E
Sbjct: 103 CEYLHEYNLRRMPECQNFARTGYCPNGDECLYQHVPEDAKIPPCEH 148
>gi|322708844|gb|EFZ00421.1| CCCH zinc finger protein [Metarhizium anisopliae ARSEF 23]
Length = 383
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS- 527
P V C +LK G+C G+ C SHD P + C H+A+ C K D CP+ H +
Sbjct: 220 PTRVAVCKDFLKDGKCPNGESCDLSHDVSP--ERVPNCLHYAKGHCTKAD-CPYTHSRAA 276
Query: 528 --KYPCENFVAKGFCNRGDNCLFSH 550
CE F G+C++G +C H
Sbjct: 277 PGALVCEAFGFYGYCDKGASCTERH 301
>gi|328718990|ref|XP_001945480.2| PREDICTED: hypothetical protein LOC100163799 isoform 1
[Acyrthosiphon pisum]
Length = 846
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
K C ++L+G+C + + C +SH P + + C + + C K D C F H S++PC+
Sbjct: 253 KVCQYFLQGKCLKENNCTYSHQQ-PNGRKMELCKFYLMDCCSKEDRCTFMH--SEFPCKY 309
Query: 534 FVAKGFCNRGDNCLFSH 550
+ C G NC FSH
Sbjct: 310 YHTGMKCYSGVNCRFSH 326
>gi|328718988|ref|XP_003246634.1| PREDICTED: hypothetical protein LOC100163799 isoform 3
[Acyrthosiphon pisum]
Length = 862
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
K C ++L+G+C + + C +SH P + + C + + C K D C F H S++PC+
Sbjct: 247 KVCQYFLQGKCLKENNCTYSHQQ-PNGRKMELCKFYLMDCCSKEDRCTFMH--SEFPCKY 303
Query: 534 FVAKGFCNRGDNCLFSH 550
+ C G NC FSH
Sbjct: 304 YHTGMKCYSGVNCRFSH 320
>gi|328718986|ref|XP_003246633.1| PREDICTED: hypothetical protein LOC100163799 isoform 2
[Acyrthosiphon pisum]
Length = 868
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
K C ++L+G+C + + C +SH P + + C + + C K D C F H S++PC+
Sbjct: 253 KVCQYFLQGKCLKENNCTYSHQQ-PNGRKMELCKFYLMDCCSKEDRCTFMH--SEFPCKY 309
Query: 534 FVAKGFCNRGDNCLFSH 550
+ C G NC FSH
Sbjct: 310 YHTGMKCYSGVNCRFSH 326
>gi|302926493|ref|XP_003054305.1| hypothetical protein NECHADRAFT_98820 [Nectria haematococca mpVI
77-13-4]
gi|256735246|gb|EEU48592.1| hypothetical protein NECHADRAFT_98820 [Nectria haematococca mpVI
77-13-4]
Length = 470
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +LK GRC G+ C SHD + T C HFA+ C K D CP+ H +
Sbjct: 307 PNKVALCKDFLKEGRCINGESCDLSHDMT--AERTPNCLHFAKGHCAKAD-CPYTHSKAS 363
Query: 529 YP---CENFVAKGFCNRGDNCLFSH 550
C +F G+C++G C H
Sbjct: 364 PAAPVCRDFGFNGYCSKGAECAERH 388
>gi|46107258|ref|XP_380688.1| hypothetical protein FG00512.1 [Gibberella zeae PH-1]
Length = 435
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C + LK G+C G+ C SHD P + T C HFA+ C K D+CP+ H S+
Sbjct: 272 PSKVALCKNILKDGQCVNGELCDLSHDMTP--ERTPNCLHFAKGHCAK-DDCPYTH--SR 326
Query: 529 YP-----CENFVAKGFCNRGDNCLFSH 550
P C +F G+C +G +C H
Sbjct: 327 APPAALVCRSFGFNGYCEKGADCTERH 353
>gi|221485441|gb|EEE23722.1| hypothetical protein TGGT1_026850 [Toxoplasma gondii GT1]
Length = 1565
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHD-----TVPLTKSTKACCHFARNSCMKGD-NCPFDH-- 524
+++C L GRC+ G C F+H PL K TK C + + +C D +C F H
Sbjct: 26 IQFCRFALAGRCRRGSSCTFAHSLEDLRVRPLMKKTKICAAWRKKACPFDDESCKFAHGA 85
Query: 525 -DLSK-YP--CENFVAKGFCNRGDNCLFSHKL 552
DL K P CE F A G C++G C F+H +
Sbjct: 86 GDLQKGKPALCELFRA-GKCHKGSQCRFAHHV 116
>gi|29612684|gb|AAH49953.1| Zc3h3 protein, partial [Mus musculus]
Length = 573
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 469 KPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDL 526
K K +YC +Y + GRC G+ C + HD + C F R +C K D +CPF H +
Sbjct: 284 KEKKREYCMYYNRFGRCNRGECCPYIHD----PEKVAVCTRFVRGTCKKTDGSCPFSHHV 339
Query: 527 S--KYPCENFVAKGFCNRGDNCLFSH 550
S K P ++ KG C+ NC +SH
Sbjct: 340 SKEKMPVCSYFLKGICS-NSNCPYSH 364
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C + C +SH V +++ + C F + C G C H L C +F
Sbjct: 347 CSYFLKGICSNSN-CPYSH--VYVSRKAEVCSDFLKGYCPLGAKCKKKHTLL---CPDFA 400
Query: 536 AKGFCNRGDNCLFSHK 551
+G C RG C H+
Sbjct: 401 RRGICPRGSQCQLLHR 416
>gi|390479178|ref|XP_002762352.2| PREDICTED: zinc finger CCCH domain-containing protein 4 [Callithrix
jacchus]
Length = 1293
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ +
Sbjct: 395 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYH 451
Query: 536 AKGFC 540
G C
Sbjct: 452 TTGNC 456
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS---KYPCENFVAKGFCNRGDNCLFSH 550
C +F C GD+C F HD+ K F GFC R +NC + H
Sbjct: 395 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMH 442
>gi|290973230|ref|XP_002669352.1| predicted protein [Naegleria gruberi]
gi|284082898|gb|EFC36608.1| predicted protein [Naegleria gruberi]
Length = 404
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 498 PLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLP 553
PL K C F +C KGD+CPF HD +PC+ F C +GD+C FSH P
Sbjct: 226 PLVKD--FCKFFLHGNCHKGDSCPFSHDKKTFPCKFFHLYNSCKKGDSCEFSHHTP 279
>gi|291238825|ref|XP_002739326.1| PREDICTED: Smad-interacting and CPSF-like protein-like
[Saccoglossus kowalevskii]
Length = 858
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSH----DTVPLTKSTKACCHFARNSCMKGD 518
K P P V C +L+G C++G C+FSH D +P+ C F R C + D
Sbjct: 643 KCPYIHDPDKVAVCTRFLRGTCKDGASCQFSHKVSKDKMPV------CSFFLRGVCNR-D 695
Query: 519 NCPFDH-DLSKYP--CENFVAKGFCNRGDNCLFSHKL 552
+CP+ H ++S+ C++F+ KG+C +G C H L
Sbjct: 696 DCPYLHVNVSRKAAVCQDFL-KGYCPQGQKCKERHIL 731
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 506 CCHFAR-NSCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKL 552
C + R C +G+ CP+ HD K C F+ +G C G +C FSHK+
Sbjct: 629 CMFYNRFGKCNRGNKCPYIHDPDKVAVCTRFL-RGTCKDGASCQFSHKV 676
>gi|367042830|ref|XP_003651795.1| hypothetical protein THITE_2112476 [Thielavia terrestris NRRL 8126]
gi|346999057|gb|AEO65459.1| hypothetical protein THITE_2112476 [Thielavia terrestris NRRL 8126]
Length = 437
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLKGR-CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L+G CQ G+ C SH+ +P + T C HFAR+SC K D C + H
Sbjct: 263 PHKVAICREFLQGGGCQSGEHCDLSHEPIP--ERTPTCLHFARDSCTKPD-CKYAHVKVS 319
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C +F G+C +G +C H
Sbjct: 320 PAAPVCRDFGFYGYCEKGASCPDRH 344
>gi|408396236|gb|EKJ75398.1| hypothetical protein FPSE_04417 [Fusarium pseudograminearum CS3096]
Length = 435
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C + LK G+C G+ C SHD P + T C HFA+ C K D+CP+ H S+
Sbjct: 272 PSKVALCKNILKDGQCVNGELCDLSHDMTP--ERTPNCLHFAKGHCAK-DDCPYTH--SR 326
Query: 529 YP-----CENFVAKGFCNRGDNCLFSH 550
P C +F G+C +G C H
Sbjct: 327 APPAALVCRSFGFNGYCEKGAGCTERH 353
>gi|221506298|gb|EEE31933.1| zinc finger (CCCH type) protein [Toxoplasma gondii VEG]
Length = 1570
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHD-----TVPLTKSTKACCHFARNSCMKGD-NCPFDH-- 524
+++C L GRC+ G C F+H PL K TK C + + +C D +C F H
Sbjct: 26 IQFCRFALAGRCRRGSSCTFAHSLEDLRVRPLMKKTKICAAWRKKACPFDDESCKFAHGA 85
Query: 525 -DLSK-YP--CENFVAKGFCNRGDNCLFSHKL 552
DL K P CE F A G C++G C F+H +
Sbjct: 86 GDLQKGKPALCELFRA-GKCHKGSQCRFAHHV 116
>gi|124810157|ref|XP_001348784.1| zinc finger protein, putative [Plasmodium falciparum 3D7]
gi|23497684|gb|AAN37223.1| zinc finger protein, putative [Plasmodium falciparum 3D7]
Length = 337
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
K +T K+ + KG+C DKC +SHD +P+ K +K C + +C K NC F HD
Sbjct: 70 KKETCKF--FFKKGKCIHNDKCTYSHDVIPIYKISKLCKFLVKGTCHKQ-NCIFSHDYQL 126
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ C N V C C F H
Sbjct: 127 FYCRNNVIYNSC-HNPACKFKH 147
>gi|351708776|gb|EHB11695.1| Zinc finger CCCH domain-containing protein 8, partial
[Heterocephalus glaber]
Length = 175
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD----- 525
K K C ++L+ +C +G++CKF HD + K + C + + C +G+NC + H+
Sbjct: 71 KGKKVCKYFLERKCIKGEQCKFDHD-AEMEKKKEMCKFYVQGYCTRGENCLYLHNIGLKL 129
Query: 526 -------LSKYPCENFVAKGFCNRGDNCLFSH 550
L +YPC+ + C +G++C FSH
Sbjct: 130 YSSLTFVLHEYPCKFYHTGTKCYQGEHCRFSH 161
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKL 552
K K C +F C+KG+ C FDHD K C+ F +G+C RG+NCL+ H +
Sbjct: 71 KGKKVCKYFLERKCIKGEQCKFDHDAEMEKKKEMCK-FYVQGYCTRGENCLYLHNI 125
>gi|237835461|ref|XP_002367028.1| zinc finger (CCCH type) protein, putative [Toxoplasma gondii ME49]
gi|211964692|gb|EEA99887.1| zinc finger (CCCH type) protein, putative [Toxoplasma gondii ME49]
Length = 1570
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHD-----TVPLTKSTKACCHFARNSCMKGD-NCPFDH-- 524
+++C L GRC+ G C F+H PL K TK C + + +C D +C F H
Sbjct: 26 IQFCRFALAGRCRRGSSCTFAHSLEDLRVRPLMKKTKICAAWRKKACPFDDESCKFAHGA 85
Query: 525 -DLSK-YP--CENFVAKGFCNRGDNCLFSHKL 552
DL K P CE F A G C++G C F+H +
Sbjct: 86 GDLQKGKPALCELFRA-GKCHKGSQCRFAHHV 116
>gi|116205852|ref|XP_001228735.1| hypothetical protein CHGG_02219 [Chaetomium globosum CBS 148.51]
gi|88182816|gb|EAQ90284.1| hypothetical protein CHGG_02219 [Chaetomium globosum CBS 148.51]
Length = 916
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 20/82 (24%)
Query: 507 CHF-ARNSCMKGDNCPFDHDLSKYP------------CENFVAKGFCNRGDNCLFSHKLP 553
CHF AR C+KG C F H+ P C+ F A G+C RGD+C ++H
Sbjct: 18 CHFYARGLCLKGSGCQFTHEGQDAPSPAQPSSSGKVRCQYFAA-GYCARGDSCFYAH--- 73
Query: 554 PKEQDPPTPSTCTPELKPSPPL 575
+ PPTP+T L P P+
Sbjct: 74 ---EAPPTPTTWRDPLPPPLPM 92
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHD-------TVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
CH Y +G C +G C+F+H+ P + C +FA C +GD+C + H+
Sbjct: 18 CHFYARGLCLKGSGCQFTHEGQDAPSPAQPSSSGKVRCQYFAAGYCARGDSCFYAHEAPP 77
Query: 529 YP 530
P
Sbjct: 78 TP 79
>gi|308805450|ref|XP_003080037.1| putative PMS2 postmeiotic segregation incre (ISS) [Ostreococcus
tauri]
gi|116058496|emb|CAL53685.1| putative PMS2 postmeiotic segregation incre (ISS) [Ostreococcus
tauri]
Length = 1013
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 22/100 (22%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSH----------DTVPLTKSTKACCHFARNSCMKGDNCPF 522
V C+ + +G C GD C+FSH C F +C GD+C F
Sbjct: 915 VPKCYAFERGECNRGDSCRFSHGPGSAAGRGGGGGGGGGGGGVCYAFQNGNCSYGDSCRF 974
Query: 523 DHDLSKYP-----------CENFVAKGFCNRGDNCLFSHK 551
HD + P C + A+G C RGD+C FSH+
Sbjct: 975 SHDPNAPPSRPGSRGPPGKCYAW-AEGNCTRGDSCRFSHE 1013
>gi|396472497|ref|XP_003839131.1| hypothetical protein LEMA_P028040.1 [Leptosphaeria maculans JN3]
gi|312215700|emb|CBX95652.1| hypothetical protein LEMA_P028040.1 [Leptosphaeria maculans JN3]
Length = 254
Score = 56.2 bits (134), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CE 532
C +++G C +G++C H V + + C H+ R C KGD C F H+ L + P C
Sbjct: 48 CKAFMQGHCPDGNRCPNKHH-VTSSYNNLVCKHWLRGLCKKGDTCEFLHEYNLRRMPECS 106
Query: 533 NFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
+ C+ GD+CL+ H + P+ + P P
Sbjct: 107 YYARTQTCSNGDDCLYLH-IDPEAKRPACP 135
Score = 50.8 bits (120), Expect = 0.003, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDH--DLSKYPCE 532
C H+L+G C++GD C+F H+ + C ++AR +C GD+C + H +K P
Sbjct: 77 CKHWLRGLCKKGDTCEFLHEYN--LRRMPECSYYARTQTCSNGDDCLYLHIDPEAKRPAC 134
Query: 533 NFVAKGFCNRGDNCLFSH 550
+GFC G +C H
Sbjct: 135 PHYDRGFCPLGPHCALKH 152
>gi|392589980|gb|EIW79310.1| hypothetical protein CONPUDRAFT_138447 [Coniophora puteana
RWD-64-598 SS2]
Length = 393
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 460 RRLKLPQNLKPKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD 518
R L P P V C +L+G C + C SHD +P + T C HFA N
Sbjct: 195 RGLTCPYQHDPNKVAICWPFLQGNCPNSAETCHLSHDPIP--ERTPLCVHFANNGRCTRQ 252
Query: 519 NCPFDH---DLSKYPCENFVAKGFCNRGDNCLFSH 550
+CPF H K C +F G+C +G +C H
Sbjct: 253 SCPFPHVRVGQRKGVCRDFAVLGYCAKGLDCEMQH 287
>gi|149066179|gb|EDM16052.1| zinc finger CCCH type domain containing 3 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 449
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 469 KPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDL 526
K K +YC +Y + GRC G+ C + HD + C F R +C K D +CPF H +
Sbjct: 159 KEKKREYCMYYNRFGRCNRGECCPYIHD----PEKVAVCTRFVRGTCKKTDGSCPFSHHV 214
Query: 527 S--KYPCENFVAKGFCNRGDNCLFSH 550
S K P ++ KG C+ NC +SH
Sbjct: 215 SKEKMPVCSYFLKGICS-NSNCPYSH 239
>gi|426196583|gb|EKV46511.1| hypothetical protein AGABI2DRAFT_205796 [Agaricus bisporus var.
bisporus H97]
Length = 417
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 460 RRLKLPQNLKPKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFA-RNSCMKG 517
R L P PK V C +++G C D C SHD P + T C HF R C K
Sbjct: 221 RGLTCPYQHDPKKVAICWKFMQGDCPHNADSCNLSHDPTP--ERTPLCVHFLNRGRCTK- 277
Query: 518 DNCPFDH-DLSKYP--CENFVAKGFCNRGDNCLFSH 550
+ CPF H ++ K C++F G+C RG +C +H
Sbjct: 278 EKCPFPHVNVGKKEGVCKDFAVLGYCVRGVSCDKNH 313
>gi|303391202|ref|XP_003073831.1| putative zinc finger domain-containing protein [Encephalitozoon
intestinalis ATCC 50506]
gi|303302979|gb|ADM12471.1| putative zinc finger domain-containing protein [Encephalitozoon
intestinalis ATCC 50506]
Length = 118
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 503 TKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQD 558
T C F NSC GDNC + HD SK+PC+ F KG C R D C FSH+ PP +++
Sbjct: 44 TILCKFFLMNSCKHGDNCTYSHDTSKFPCKAFHIKGNCTRKD-CPFSHE-PPTDKE 97
>gi|378754989|gb|EHY65017.1| hypothetical protein NERG_02073 [Nematocida sp. 1 ERTm2]
Length = 132
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 496 TVPLTKSTKACC-HFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
++P K C +F +N+C++G NC F HDLSK+PC+ F K C R NC FSH
Sbjct: 46 SMPFKPEKKHLCKYFVKNACIRGSNCTFSHDLSKFPCKLFHIKKNCRR-KNCQFSH 100
>gi|407929427|gb|EKG22257.1| Zinc finger CCCH-type protein [Macrophomina phaseolina MS6]
Length = 447
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C YL +G C GD C SH+ P AC HF R +C DNC + H +
Sbjct: 274 PNKVAICKDYLLRGNCALGDGCDLSHEPTP--NRVPACLHFLRGNCTN-DNCRYAHIRVN 330
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
S C F A G+C +G +C H
Sbjct: 331 PSGPVCHAFGALGYCEKGSDCTERH 355
>gi|255083106|ref|XP_002504539.1| superfamily I helicase [Micromonas sp. RCC299]
gi|226519807|gb|ACO65797.1| superfamily I helicase [Micromonas sp. RCC299]
Length = 1155
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 455 RQLGVRRLKL--PQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN 512
R +G + LK P+N +P + C +L G+C G C+F+H+ KS K C F
Sbjct: 1042 RGVGFKPLKPRHPENPQPDNQRVCREWLAGKCLYGSDCRFAHEKRYDAKSKKLCRDFMMG 1101
Query: 513 SCMKGDNCPFDHD 525
C +G C F HD
Sbjct: 1102 KCHRGAECVFSHD 1114
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 494 HDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL-----SKYPCENFVAKGFCNRGDNCLF 548
H P + + C + C+ G +C F H+ SK C +F+ G C+RG C+F
Sbjct: 1053 HPENPQPDNQRVCREWLAGKCLYGSDCRFAHEKRYDAKSKKLCRDFMM-GKCHRGAECVF 1111
Query: 549 SH 550
SH
Sbjct: 1112 SH 1113
>gi|387592747|gb|EIJ87771.1| hypothetical protein NEQG_01843 [Nematocida parisii ERTm3]
gi|387595373|gb|EIJ92997.1| hypothetical protein NEPG_01952 [Nematocida parisii ERTm1]
Length = 132
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
C +F +N+C++G NC F HDLSK+PC+ F K C R NC FSH
Sbjct: 57 CKYFVKNACIRGSNCTFSHDLSKFPCKLFHIKKNCRR-KNCQFSH 100
>gi|326673163|ref|XP_687737.5| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Danio
rerio]
Length = 1116
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 20/76 (26%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L+GRC +GD+CKF HD V K + L +YPC+ F
Sbjct: 305 CKYFLEGRCIKGDQCKFEHDNVVPEKKKEL--------------------LREYPCKFFH 344
Query: 536 AKGFCNRGDNCLFSHK 551
C +GDNC FSH+
Sbjct: 345 TGAKCYQGDNCKFSHE 360
>gi|393218484|gb|EJD03972.1| hypothetical protein FOMMEDRAFT_133331 [Fomitiporia mediterranea
MF3/22]
Length = 292
Score = 55.8 bits (133), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 46/155 (29%)
Query: 465 PQNLKP------------KTVKYCHHYLKGRCQEGDKCKFSHD----------------- 495
PQN +P + C H+L+G C++GD C+F H+
Sbjct: 70 PQNFQPPKQVSMHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKFGY 129
Query: 496 ---------TVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNC 546
P K + C + R C G +CP H + + C+N++ G+C G C
Sbjct: 130 CQAGDECLYAHPKEKKIE-CPDYKRGFCKLGPHCPRKH-VRRVACQNYLT-GYCPLGPEC 186
Query: 547 LFSHKLP----PKEQDPPTPSTCTPELKPSPPLYA 577
H P PK+ +PP + +L P PP Y
Sbjct: 187 TRGHPKPDLPTPKDYEPPEAPS-QRDLGPPPPGYG 220
>gi|302837955|ref|XP_002950536.1| hypothetical protein VOLCADRAFT_91027 [Volvox carteri f.
nagariensis]
gi|300264085|gb|EFJ48282.1| hypothetical protein VOLCADRAFT_91027 [Volvox carteri f.
nagariensis]
Length = 941
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLS-KYPCEN 533
C + GRC +G C F+H P+T+ C F R C +G+ C F HD PC
Sbjct: 753 CKFWRLGRCAKGADCAFAHVGRPVTRLLP--CRFWRQGRCQRGEVCSFSHDPQLPEPCGG 810
Query: 534 FVAKGFCNRGDNCLFSHKLP 553
+ G C ++C H P
Sbjct: 811 LLENGACPDPEHCRLGHYTP 830
>gi|395334665|gb|EJF67041.1| hypothetical protein DICSQDRAFT_96073 [Dichomitus squalens LYAD-421
SS1]
Length = 283
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 34/132 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSHD--------------------------TVPLTKSTKACCHF 509
C H+L+G C++GD C+F H+ P + + C +
Sbjct: 92 CKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLYAHPKERKVE-CPDY 150
Query: 510 ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKL----PPKEQDPPTPSTC 565
R C G NCP H + + C+ ++ GFC G +C H PPK +PP P +
Sbjct: 151 NRGFCRLGPNCPRKH-VRRVACQLYLT-GFCPLGPDCPRGHPKPGIPPPKAYEPPEPPSV 208
Query: 566 TPELKPSPPLYA 577
+L P PP Y
Sbjct: 209 R-DLGPPPPGYG 219
>gi|154321443|ref|XP_001560037.1| hypothetical protein BC1G_01596 [Botryotinia fuckeliana B05.10]
Length = 260
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK---ACCHFARNSCMKGDNCPFDHD--LSKYP 530
C YL+G C G C H P C H+ R C KG+ C F H+ L K P
Sbjct: 55 CKAYLQGHCPLGTNCPDKHAANPNNSWNFNNMVCKHWLRGLCKKGETCEFLHEFNLRKMP 114
Query: 531 -CENFVAKGFCNRGDNCLFSHKLP 553
C FV G+C+ GD CL+ H P
Sbjct: 115 ECNFFVKNGYCSNGDECLYLHVDP 138
Score = 42.7 bits (99), Expect = 0.80, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYPCE 532
C H+L+G C++G+ C+F H+ + C F +N C GD C + H SK
Sbjct: 88 CKHWLRGLCKKGETCEFLHEFN--LRKMPECNFFVKNGYCSNGDECLYLHVDPASKMGNC 145
Query: 533 NFVAKGFCNRGDNCLFSH 550
KGFC G C H
Sbjct: 146 PHYDKGFCPLGPRCSKKH 163
Score = 42.7 bits (99), Expect = 0.81, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
C+ ++K G C GD+C + H V C H+ + C G C H + K CE +
Sbjct: 116 CNFFVKNGYCSNGDECLYLH--VDPASKMGNCPHYDKGFCPLGPRCSKKH-IRKALCEFY 172
Query: 535 VAKGFCNRGDNCLFSHKLPPKEQDPPT 561
+A GFC G C +H P + PT
Sbjct: 173 LA-GFCPDGPKCKKAHPRWPSDLPKPT 198
>gi|426346925|ref|XP_004041119.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Gorilla gorilla gorilla]
Length = 179
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 464 LP-QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
LP Q + C+ + KG C++G C F HD + C H+ R C KGD+C F
Sbjct: 28 LPFQGMDKSASAVCNFFTKGLCEKGKLCPFRHDR---GEKMVVCKHWLRGLCKKGDHCKF 84
Query: 523 DH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
H DL++ P F +K G C+ + C F H P K QD P
Sbjct: 85 LHQYDLTRMPECYFYSKFGDCSNKE-CPFLHVKPAFKSQDCP 125
Score = 48.1 bits (113), Expect = 0.021, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 28/103 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK-------------STKACCHFARNSCMKGDNCPF 522
C H+L+G C++GD CKF H LT+ S K C K +CP+
Sbjct: 68 CKHWLRGLCKKGDHCKFLHQ-YDLTRMPECYFYSKFGDCSNKECPFLHVKPAFKSQDCPW 126
Query: 523 -------DHDLSKYP------CENFVAKGFCNRGDNCLFSHKL 552
D L KY C N++ GFC G C F+ K+
Sbjct: 127 YDQGFCKDGPLCKYRHVPRIMCLNYLV-GFCPEGPKCQFAQKI 168
>gi|344291043|ref|XP_003417246.1| PREDICTED: LOW QUALITY PROTEIN: putative cleavage and
polyadenylation specificity factor subunit 4-like
protein-like [Loxodonta africana]
Length = 185
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C + KG C +G +C F HD+ T C H+ R C KGD C F H D+++ P
Sbjct: 41 CTFFTKGLCGKGKRCPFRHDS---GGRTVVCKHWLRGLCKKGDQCHFLHQYDVARMPECY 97
Query: 534 FVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
F +K G CN + C F H P K QD P
Sbjct: 98 FYSKFGDCNNKE-CSFLHVKPASKTQDCP 125
Score = 44.3 bits (103), Expect = 0.33, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 28/101 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSHDT--------------------------VPLTKSTKACCHF 509
C H+L+G C++GD+C F H V T+ C +
Sbjct: 68 CKHWLRGLCKKGDQCHFLHQYDVARMPECYFYSKFGDCNNKECSFLHVKPASKTQDCPWY 127
Query: 510 ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
+ C G C + H + + C N++A GFC G C F+
Sbjct: 128 DQGFCKNGPLCKYRH-IHRVMCINYLA-GFCPEGPKCQFTQ 166
>gi|148687046|gb|EDL18993.1| cleavage and polyadenylation specific factor 4, isoform CRA_b [Mus
musculus]
Length = 251
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 28/119 (23%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 45 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 100
Query: 515 MKGDNCPFDH--DLSKYP---------------------CENFVAKGFCNRGDNCLFSH 550
KGD C F H D++K P C N++ GFC G +C F H
Sbjct: 101 KKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNYLV-GFCPEGPSCKFMH 158
>gi|341895197|gb|EGT51132.1| hypothetical protein CAEBREN_30953 [Caenorhabditis brenneri]
Length = 589
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
+ C + +G C++GD+C +SH + C +A + C KG C H ++PC+
Sbjct: 185 QICKFFREGYCRDGDQCSYSHQAEDSLRRPVLCNFYANSFCKKGLQCLMLH--GEFPCKQ 242
Query: 534 FVAKGFCNRGDNCLFSH 550
F KG CN D C FSH
Sbjct: 243 F-HKGLCN-NDQCRFSH 257
>gi|341886227|gb|EGT42162.1| hypothetical protein CAEBREN_22772 [Caenorhabditis brenneri]
Length = 589
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
+ C + +G C++GD+C +SH + C +A + C KG C H ++PC+
Sbjct: 185 QICKFFREGYCRDGDQCSYSHQAEDSLRRPVLCNFYANSFCKKGLQCLMLH--GEFPCKQ 242
Query: 534 FVAKGFCNRGDNCLFSH 550
F KG CN D C FSH
Sbjct: 243 F-HKGLCN-NDQCRFSH 257
>gi|297790246|ref|XP_002863025.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308825|gb|EFH39284.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 627
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 187/433 (43%), Gaps = 90/433 (20%)
Query: 281 NAVVSNEKKEDEEQVSKDVTDKTDFPCNEKCGGT-------EKFSDSTSVCLNAVDHNAS 333
N ++KK +E S + + E C T EK DST V +++V
Sbjct: 175 NISTESDKKVEEVPKSAESNEVKSSGFLEACDETVQREMELEKPVDSTPVLVDSVSRIVE 234
Query: 334 GGTVELQETVRNETQCKTKIFADGTATMAIDPDRYNSMPGVGRNKRKASRGEEGISSFSA 393
VE E I D M ++ D P + + SR G S ++
Sbjct: 235 DDDVEEGE-----------ISGDDNDDMLVEDDE----PVERHEECQVSRDGIGNSHLTS 279
Query: 394 SLDDSTVQKEVVKQRVTQEQGITTKDKLDSGACNKRKRSALSKEKKAKKKQKERKKRAEK 453
+ KE+ + +T +T+ ++D G K KRSA SK+ KA+K+ K RKKRA++
Sbjct: 280 ---HESFGKELGVENLT--CILTSYLQMDPGTSIK-KRSAPSKDAKARKRAKARKKRAKE 333
Query: 454 NRQLGVRRLKL-PQNLKPKTVKYCHHYLKGRCQE-----GDKCKFSHDTVPLTKSTKACC 507
LGV++LKL P KPK +KYC HYLK RC E GD C FSH P + S
Sbjct: 334 RIALGVKKLKLKPVAPKPKPIKYCRHYLKERCHESFCHRGDICLFSHKGTPQSASDTPSA 393
Query: 508 HFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTP 567
+ +S N A F + N K +E P
Sbjct: 394 NVTASST------------------NITAASFSPQKTN-----KQSVREAIAKLPGI--- 427
Query: 568 ELKPSPPLYASNLLKPLNNNKVSHQNV-DALSNHGKVSSFKNIEQSVAKSILKPPALAPK 626
+ + S + LKPL+ + +H+N DALS K++ Q + L+ P++APK
Sbjct: 428 QARVS---SSVGFLKPLSQS--NHRNPSDALS--PKINEPVTHPQVLP---LRKPSVAPK 477
Query: 627 GISYLFLGKSSFLEASNLGQGISSPKKSDSSKFANQT---AQIASDSVQSRDETPRRIP- 682
G+S+L L K+ + + +S + +D+S NQT +Q+ S +P
Sbjct: 478 GMSFLSLDKT--FQEDTVKVSPASKRNTDNSD--NQTLKQSQLGSS-----------LPL 522
Query: 683 VATKGVNFLSFGN 695
V KG++FLSF +
Sbjct: 523 VPPKGISFLSFAS 535
>gi|440639939|gb|ELR09858.1| hypothetical protein GMDG_04338 [Geomyces destructans 20631-21]
Length = 251
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDHD--LSKYP- 530
C Y+ G C G C H P + C H+ R C KG++C F H+ L + P
Sbjct: 41 CKAYVAGHCPLGASCPDRHIAAPTGSNYNNLVCKHWLRGLCKKGEHCEFLHEYNLRRMPE 100
Query: 531 CENFVAKGFCNRGDNCLFSHKLP 553
C F G+C+ G+ CL+ H P
Sbjct: 101 CSFFARNGYCSNGEECLYLHVDP 123
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYPCE 532
C H+L+G C++G+ C+F H+ + C FARN C G+ C + H S+ P
Sbjct: 73 CKHWLRGLCKKGEHCEFLHEYN--LRRMPECSFFARNGYCSNGEECLYLHVDPESRLPAC 130
Query: 533 NFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 131 GWYERGFCPLGPRCARRH 148
>gi|440634688|gb|ELR04607.1| hypothetical protein GMDG_06889 [Geomyces destructans 20631-21]
Length = 442
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L+ G C D C SH+ P + T AC HFAR +C +NC + H
Sbjct: 277 PTKVAICKDFLQTGTCAASDSCDLSHEATP--ERTPACLHFARGNCAN-ENCRYAHVRVS 333
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
S C F G+C RG C
Sbjct: 334 ASAPVCRAFAVYGYCERGAEC 354
>gi|193788659|ref|NP_001123357.1| putative cleavage and polyadenylation specificity factor subunit
4-like protein [Homo sapiens]
gi|332848949|ref|XP_001149545.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pan troglodytes]
gi|206729925|sp|A6NMK7.3|CPS4L_HUMAN RecName: Full=Putative cleavage and polyadenylation specificity
factor subunit 4-like protein
gi|187957320|gb|AAI57871.1| CPSF4L protein [Homo sapiens]
Length = 179
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 464 LP-QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
LP Q + C+ + KG C++G C F HD + C H+ R C KGD+C F
Sbjct: 28 LPFQGMDKSASAVCNFFTKGLCEKGKLCPFRHDR---GEKMVVCKHWLRGLCKKGDHCKF 84
Query: 523 DH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
H DL++ P F +K G C+ + C F H P K QD P
Sbjct: 85 LHQYDLTRMPECYFYSKFGDCSNKE-CSFLHVKPAFKSQDCP 125
Score = 48.5 bits (114), Expect = 0.017, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 28/103 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK-------------STKACCHFARNSCMKGDNCPF 522
C H+L+G C++GD CKF H LT+ S K C K +CP+
Sbjct: 68 CKHWLRGLCKKGDHCKFLHQ-YDLTRMPECYFYSKFGDCSNKECSFLHVKPAFKSQDCPW 126
Query: 523 -------DHDLSKYP------CENFVAKGFCNRGDNCLFSHKL 552
D L KY C N++ GFC G C F+ K+
Sbjct: 127 YDQGFCKDGPLCKYRHVPRIMCLNYLV-GFCPEGPKCQFAQKI 168
>gi|395533099|ref|XP_003768601.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Sarcophilus harrisii]
Length = 170
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 456 QLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCM 515
Q G+ L P + V C +LKG C++G C F HD + T C H+ R C
Sbjct: 22 QRGIGFLPFP-GMDKSGVAVCTFFLKGLCEKGKLCPFRHDD---GEKTVVCKHWLRGLCK 77
Query: 516 KGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSH 550
K D C F H D++K P F +K G C+ + CLF H
Sbjct: 78 KSDCCKFLHQYDVTKMPECYFYSKFGECSNKE-CLFLH 114
Score = 46.2 bits (108), Expect = 0.079, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 27/109 (24%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSH--DTVPLTK----------STKACCHFARNSCMKGD 518
KTV C H+L+G C++ D CKF H D + + S K C +S K
Sbjct: 64 KTV-VCKHWLRGLCKKSDCCKFLHQYDVTKMPECYFYSKFGECSNKECLFLHTDSASKIR 122
Query: 519 NCP-FDHDLSKYP------------CENFVAKGFCNRGDNCLFSHKLPP 554
+CP +D KY C N++ GFC G C F+ + P
Sbjct: 123 DCPWYDQGFCKYGPLCKFHHVRRVLCVNYLV-GFCPEGPGCRFTQYVLP 170
>gi|391332409|ref|XP_003740627.1| PREDICTED: uncharacterized protein LOC100904311 [Metaseiulus
occidentalis]
Length = 623
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 474 KYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS--KYP 530
K C +++ G+C +GD CKF HD K C F R +C K + CPF H++ K P
Sbjct: 454 KDCIFFIRFGKCHKGDNCKFQHDL----KKVSICTKFLRGTC-KAEKCPFSHEVEKDKMP 508
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ +G C D C + H
Sbjct: 509 LCSYFQRGLCKASD-CPYRH 527
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 370 SMPGVGRNKR----KASRGEEGISSFSASLDDSTVQKEVVKQRVTQEQGITTKDKLDSGA 425
SM G+G ++ + SR E GISS +S ++ + + R +G++ K S
Sbjct: 312 SMDGIGPTRKSEQKRMSRIEYGISS-----SESCFKRVLKRTRFKLLKGVSVTKKAASSH 366
Query: 426 CNKRKRSALSKEKKAKKKQ-------------KERKKRAEKNRQLGVRRLKLPQNLKPKT 472
K+S K KK + Q K+ K N L V+ ++K +
Sbjct: 367 NKIAKKSVALKAKKKQHTQTLLMLRGVPFQSSKDGKALKRINTSLTVKLAAAKNSMKSRF 426
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLSKYP- 530
H+ + C S +V + K C F R C KGDNC F HDL K
Sbjct: 427 ----HNTGTVINRVARLCSESSKSVSNLEQRKDCIFFIRFGKCHKGDNCKFQHDLKKVSI 482
Query: 531 CENFVAKGFCNRGDNCLFSHKL 552
C F+ +G C + + C FSH++
Sbjct: 483 CTKFL-RGTC-KAEKCPFSHEV 502
>gi|297701675|ref|XP_002827828.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pongo abelii]
Length = 179
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 464 LP-QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
LP Q + C+ + KG C++G C F HD + C H+ R C KGD+C F
Sbjct: 28 LPFQGMNKSASAVCNFFTKGLCEKGKLCPFRHDR---GEKMVVCKHWLRGLCKKGDHCKF 84
Query: 523 DH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
H DL++ P F +K G C+ + C F H P K QD P
Sbjct: 85 LHQYDLTRMPECYFYSKFGDCSNKE-CPFLHVKPAFKSQDCP 125
Score = 47.4 bits (111), Expect = 0.040, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C H+L+G C++GD CKF H LT+ + C +++ CPF H + ++
Sbjct: 68 CKHWLRGLCKKGDHCKFLHQ-YDLTRMPE-CYFYSKFGDCSNKECPFLHVKPAFKSQDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G C + H
Sbjct: 126 WYDQGFCKDGPLCKYRH 142
>gi|452001978|gb|EMD94437.1| hypothetical protein COCHEDRAFT_1222928 [Cochliobolus
heterostrophus C5]
Length = 255
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CE 532
C YL+G C +G KC H+ V + + C H+ R C KG+ C F H+ L + P C
Sbjct: 48 CKAYLQGHCPDGSKCPNKHN-VSSSYNNLVCKHWLRGLCKKGETCEFLHEYNLRRMPECS 106
Query: 533 NFVAKGFCNRGDNCLFSHKLP 553
+ C+ GD+CL+ H P
Sbjct: 107 YYARTQTCSNGDDCLYLHLDP 127
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDH---DLSKYPC 531
C H+L+G C++G+ C+F H+ + C ++AR +C GD+C + H D + C
Sbjct: 77 CKHWLRGLCKKGETCEFLHEYN--LRRMPECSYYARTQTCSNGDDCLYLHLDPDAKRASC 134
Query: 532 ENFVAKGFCNRGDNCLFSH 550
++ +GFC G +C H
Sbjct: 135 PHY-DRGFCPLGPHCALKH 152
>gi|367018548|ref|XP_003658559.1| hypothetical protein MYCTH_16224, partial [Myceliophthora
thermophila ATCC 42464]
gi|347005826|gb|AEO53314.1| hypothetical protein MYCTH_16224, partial [Myceliophthora
thermophila ATCC 42464]
Length = 253
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 48/117 (41%), Gaps = 21/117 (17%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTK-----------------ACCH 508
Q+ P C YL G C C H T +++ C H
Sbjct: 25 QHSLPPDRPVCKAYLSGSCPLKSHCPERHTTPAGHPASQRDGGGGGGGGGGGFGSLVCKH 84
Query: 509 FARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
+ R C KG+ C F H+ L K P C FV G+C+ GD CL+ H + P + PP P
Sbjct: 85 WLRGLCKKGEACEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLH-IDPSSRLPPCP 140
>gi|388579009|gb|EIM19339.1| hypothetical protein WALSEDRAFT_61516 [Wallemia sebi CBS 633.66]
Length = 285
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 36/144 (25%)
Query: 464 LPQNLKPK--TVKYCHHYLKGRCQEGDKCKFSHDT------------------------- 496
LP NL+ + V C H+L+G C++GD C+F H+
Sbjct: 27 LPTNLRERERAVTVCKHWLRGLCKKGDACEFLHEYDLRKMPECWWFVKWGWCANGEECLY 86
Query: 497 --VPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---K 551
L C + R C +G CPF H + + C ++A G+C G C H +
Sbjct: 87 RHTSLEGRKNECPEYLRGFCRRGPYCPFKH-IRRAACPAYLA-GYCPDGPYCARGHPKSR 144
Query: 552 LPPKE--QDPPTPSTCTPELKPSP 573
LP + +D P EL P P
Sbjct: 145 LPERYTLEDADPPPVPDEELGPPP 168
>gi|30466247|ref|NP_848671.1| cleavage and polyadenylation specificity factor subunit 4 [Mus
musculus]
gi|348568560|ref|XP_003470066.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 3 [Cavia porcellus]
gi|37999672|sp|Q8BQZ5.1|CPSF4_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=Clipper homolog; AltName:
Full=Clipper/CPSF 30K
gi|26337803|dbj|BAC32587.1| unnamed protein product [Mus musculus]
Length = 211
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 28/119 (23%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP---------------------CENFVAKGFCNRGDNCLFSH 550
KGD C F H D++K P C N++ GFC G +C F H
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNYLV-GFCPEGPSCKFMH 134
>gi|340924394|gb|EGS19297.1| putative mRNA 3'-end processing protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 265
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 49/123 (39%), Gaps = 23/123 (18%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTK------------------ 504
K Q+ P C Y G C C H +P T +
Sbjct: 37 KTYQHSLPADRPVCKAYQTGSCPLKSHCPERHTLLPSTANANNGKDPQTGTGGGGGGFGS 96
Query: 505 -ACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
C H+ R C KG+ C F H+ L K P C FV G+C+ GD CL+ H + P + PP
Sbjct: 97 LVCKHWLRALCKKGETCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLH-IDPSSRVPP 155
Query: 561 TPS 563
P+
Sbjct: 156 CPA 158
>gi|332261216|ref|XP_003279670.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Nomascus leucogenys]
Length = 179
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 464 LP-QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
LP Q + C+ + KG C++G C F HD + C H+ R C KGD+C F
Sbjct: 28 LPFQGMDKSASAVCNFFTKGLCEKGKLCPFRHDR---GEKMVVCKHWLRGLCKKGDHCKF 84
Query: 523 DH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
H DL++ P F +K G C+ + C F H P K QD P
Sbjct: 85 LHQYDLTRMPECYFYSKFGDCSNKE-CPFLHVKPAFKSQDCP 125
Score = 47.8 bits (112), Expect = 0.029, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 28/103 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK-------------STKACCHFARNSCMKGDNCPF 522
C H+L+G C++GD CKF H LT+ S K C K +CP+
Sbjct: 68 CKHWLRGLCKKGDHCKFLHQ-YDLTRMPECYFYSKFGDCSNKECPFLHVKPAFKSQDCPW 126
Query: 523 -------DHDLSKYP------CENFVAKGFCNRGDNCLFSHKL 552
D L KY C N++ GFC G C F+ K+
Sbjct: 127 YDQGFCKDGPLCKYRHVPRIMCLNYLV-GFCPEGPKCQFAQKI 168
>gi|395514832|ref|XP_003761616.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Sarcophilus harrisii]
Length = 211
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 28/119 (23%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP---------------------CENFVAKGFCNRGDNCLFSH 550
KGD C F H D++K P C N++ GFC G +C F H
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNYLV-GFCPEGPSCKFMH 134
>gi|401412948|ref|XP_003885921.1| putative zinc finger (CCCH type) protein [Neospora caninum
Liverpool]
gi|325120341|emb|CBZ55895.1| putative zinc finger (CCCH type) protein [Neospora caninum
Liverpool]
Length = 1546
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHD-----TVPLTKSTKACCHFARNSCMKGD-NCPFDH-- 524
+++C L GRC+ G C F+H PL K TK C + + +C D +C F H
Sbjct: 26 IQFCRFALAGRCRRGSSCTFAHSLEDLRVRPLMKKTKICAAWRKKACPFDDESCKFAHGA 85
Query: 525 -DLSK-YP--CENFVAKGFCNRGDNCLFSHKL 552
DL K P CE F A G C++G C F+H +
Sbjct: 86 GDLQKGKPALCELFRA-GKCHKGAQCRFAHHV 116
>gi|301773468|ref|XP_002922153.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Ailuropoda melanoleuca]
Length = 895
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLS--KYP 530
YC +Y + GRC G C + HD C F R +C K D CPF H +S K P
Sbjct: 669 YCMYYNRFGRCNHGQHCPYIHD----PDKVAVCTRFLRGTCKKTDGTCPFSHHVSKEKMP 724
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ +C +SH
Sbjct: 725 VCSYFLKGICS-NSSCPYSH 743
>gi|21707915|gb|AAH34435.1| ZC3H3 protein [Homo sapiens]
Length = 335
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS- 527
K +YC +Y + GRC G++C + HD + C F R +C K D CPF H +S
Sbjct: 55 KRKEYCMYYNRFGRCNRGERCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 110
Query: 528 -KYPCENFVAKGFCNRGDNCLFSH 550
K P ++ KG C+ NC +SH
Sbjct: 111 EKMPVCSYFLKGICS-NSNCPYSH 133
>gi|380476569|emb|CCF44644.1| hypothetical protein CH063_13974 [Colletotrichum higginsianum]
Length = 431
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 26/133 (19%)
Query: 436 KEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKT-----------------VKYCHH 478
K ++K R E RQ V++L +P ++ T V C
Sbjct: 218 KFHRSKTGNLYRAGVLEAQRQTSVKKLDVPCSMFSLTGSCAKGPACRYMHDASRVAVCRE 277
Query: 479 YL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP----CEN 533
L KG C G+ C SHD P + T C HF + +C NCP+ H S P C +
Sbjct: 278 LLHKGNCANGESCDLSHDLTP--QRTPTCVHFIKGNCAN-PNCPYAHS-SVSPGALVCRS 333
Query: 534 FVAKGFCNRGDNC 546
F G+C++GD C
Sbjct: 334 FGMYGYCDKGDKC 346
>gi|389585211|dbj|GAB67942.1| zinc finger protein [Plasmodium cynomolgi strain B]
Length = 348
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 445 KERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKST 503
+E+K+ + N + + + + K + + C + K G+C +KC +SHD P+ K +
Sbjct: 44 QEKKQNSGANNKKAKKVTGMFDDYKIQKREICKFFFKKGKCMHNEKCTYSHDVTPIYKIS 103
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
K C + +C K +NC F HD + C N V C C F H
Sbjct: 104 KLCKFLVKGTC-KKENCIFSHDYKLFFCRNNVIYNSC-CNPQCKFKH 148
>gi|242008095|ref|XP_002424848.1| hypothetical protein Phum_PHUM156690 [Pediculus humanus corporis]
gi|212508398|gb|EEB12110.1| hypothetical protein Phum_PHUM156690 [Pediculus humanus corporis]
Length = 1341
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +++KG C +G +C +SH P K + C + + C K D C + H+ ++PC+ F
Sbjct: 262 CINFMKGNCNKGSECFYSHAVCP-PKKMELCKFYLMDCCAKRDKCLYLHE--EFPCKFFH 318
Query: 536 AKGFCNRGDNCLFSH 550
C G C FSH
Sbjct: 319 TGLKCYSGKKCKFSH 333
>gi|342873918|gb|EGU76012.1| hypothetical protein FOXB_13484 [Fusarium oxysporum Fo5176]
Length = 458
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C LK G+C G+ C SHD P + T C H+A+ C K D CP+ H +
Sbjct: 295 PNKVALCKDILKDGQCVNGESCDLSHDMTP--ERTPNCLHYAKGHCAKAD-CPYTHSKAS 351
Query: 529 YP---CENFVAKGFCNRGDNCLFSH 550
C NF G+C G C H
Sbjct: 352 PAAPVCRNFGFNGYCEMGAECTDRH 376
>gi|449551266|gb|EMD42230.1| hypothetical protein CERSUDRAFT_110762 [Ceriporiopsis subvermispora
B]
Length = 282
Score = 55.1 bits (131), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 34/132 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSHD--------------------------TVPLTKSTKACCHF 509
C H+L+G C++GD C+F H+ P + + C +
Sbjct: 95 CKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLYAHPKERRIE-CPDY 153
Query: 510 ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKL----PPKEQDPPTPSTC 565
R C G CP H + + C+ ++ GFC G C H PPK DPP P +
Sbjct: 154 KRGFCKLGPTCPRKH-VRRVACQLYLT-GFCPLGPECPRGHPKPDIPPPKAYDPPEPPSV 211
Query: 566 TPELKPSPPLYA 577
+L P PP Y
Sbjct: 212 R-DLGPPPPGYG 222
>gi|189520842|ref|XP_689680.3| PREDICTED: zinc finger CCCH domain-containing protein 3 [Danio
rerio]
Length = 929
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + G+C G+ C + HD C F R +C K D CPF H ++ K P
Sbjct: 698 YCMYYNRFGKCNHGNTCPYIHD----PDKVAVCTRFLRGTCKKTDGTCPFSHKVAKEKMP 753
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG CN +C +SH
Sbjct: 754 VCSYFLKGICN-NSSCPYSH 772
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C C +SH V +++ + C F R C +GD C H L C +F
Sbjct: 755 CSYFLKGICNNSS-CPYSH--VYVSRKAEVCEDFVRGYCPQGDKCKKKHTLV---CPDFS 808
Query: 536 AKGFCNRGDNCLFSHK 551
+ G C RG C H+
Sbjct: 809 STGVCPRGSKCKLHHR 824
>gi|302805284|ref|XP_002984393.1| hypothetical protein SELMODRAFT_445909 [Selaginella moellendorffii]
gi|300147781|gb|EFJ14443.1| hypothetical protein SELMODRAFT_445909 [Selaginella moellendorffii]
Length = 624
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 22/103 (21%)
Query: 476 CHHYL-KGRCQEGDKCKFSH---DTVPLTKSTKACCHF-ARNSCMKGDNCPFDHD----- 525
C ++ KG C GD+CKF H + V + K ++C F + SC +G C + H
Sbjct: 311 CFDFVTKGSCARGDRCKFKHTFENGVLIPK--RSCYDFITKGSCERGSECRYLHSSDENA 368
Query: 526 ----------LSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQD 558
L C NF KG C +GD+C FSH L K+Q+
Sbjct: 369 SSAAADNEQQLPPGSCFNFFKKGSCEKGDDCRFSHSLERKQQE 411
>gi|156100035|ref|XP_001615745.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804619|gb|EDL46018.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 350
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
C ++ K G+C +KC +SHD P+ K +K C + +C K +NC F HD + C N
Sbjct: 77 CKYFFKRGKCIHNEKCTYSHDVTPIYKISKLCKFLVKGTCEK-ENCIFSHDYKLFFCRNN 135
Query: 535 VAKGFCNRGDNCLFSH 550
V C C F H
Sbjct: 136 VIYNSC-YNPLCKFKH 150
>gi|348572439|ref|XP_003472000.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like [Cavia
porcellus]
Length = 193
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
K C ++ + +C +GD+C F HDT + K + C + + +G+NC + H+ +YPC+
Sbjct: 97 KVCKYFFERKCIKGDQCTFDHDT-EMEKKKEMCKFYVQGYFTRGENCLYLHN--EYPCKF 153
Query: 534 FVAKGFCNRGDNCLFSH 550
+ C +G++C FSH
Sbjct: 154 YHTGTKCYQGEHCRFSH 170
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K K C +F C+KGD C FDHD K C+ F +G+ RG+NCL+ H P
Sbjct: 94 KGKKVCKYFFERKCIKGDQCTFDHDTEMEKKKEMCK-FYVQGYFTRGENCLYLHNEYP 150
>gi|397478491|ref|XP_003810578.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pan paniscus]
Length = 147
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C+ + KG C++G C F HD + C H+ R C KGD+C F H DL++ P
Sbjct: 9 CNFFTKGLCEKGKLCPFRHDR---GEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECY 65
Query: 534 FVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
F +K G C+ + C F H P K QD P
Sbjct: 66 FYSKFGDCSNKE-CSFLHVKPAFKSQDCP 93
Score = 48.1 bits (113), Expect = 0.021, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 28/103 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK-------------STKACCHFARNSCMKGDNCPF 522
C H+L+G C++GD CKF H LT+ S K C K +CP+
Sbjct: 36 CKHWLRGLCKKGDHCKFLHQ-YDLTRMPECYFYSKFGDCSNKECSFLHVKPAFKSQDCPW 94
Query: 523 -------DHDLSKYP------CENFVAKGFCNRGDNCLFSHKL 552
D L KY C N++ GFC G C F+ K+
Sbjct: 95 YDQGFCKDGPLCKYRHVPRIMCLNYLV-GFCPEGPKCQFAQKI 136
Score = 43.5 bits (101), Expect = 0.47, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 499 LTKSTKACCHF-ARNSCMKGDNCPFDHDLSK--YPCENFVAKGFCNRGDNCLFSHK 551
+ KS A C+F + C KG CPF HD + C++++ +G C +GD+C F H+
Sbjct: 1 MDKSASAVCNFFTKGLCEKGKLCPFRHDRGEKMVVCKHWL-RGLCKKGDHCKFLHQ 55
>gi|402226360|gb|EJU06420.1| hypothetical protein DACRYDRAFT_113130 [Dacryopinax sp. DJM-731
SS1]
Length = 410
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDH---D 525
P+ V C +LKG C GD C SH P + C HFA C GD+C + H
Sbjct: 192 PEKVAMCPKWLKGDCPNGDSCPLSHQPTP--QRMPFCVHFANAGRCKNGDSCMYPHVHLG 249
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
+ C +F G+C +G +C
Sbjct: 250 ATAGICRDFAVLGYCEKGADC 270
>gi|297667091|ref|XP_002811827.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6 [Pongo abelii]
Length = 1169
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H++
Sbjct: 273 KGKQICKYFLEGRCIKGDQCKFDHDAE-LEKRKEICKFYLQGYCTKGENCIYMHNILY-- 329
Query: 531 CENFVAKGFCNRGDNCLFSH 550
NC FSH
Sbjct: 330 ---LKXXXXXXXXXNCKFSH 346
>gi|345316516|ref|XP_001518934.2| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Ornithorhynchus anatinus]
Length = 1116
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 49/251 (19%)
Query: 314 TEKFSDSTSVCLNAVDHNASGG-TVELQETVRNE-TQCKTKIFADGTATMAIDPDRYNSM 371
T + S S+ LN + H+ GG + + Q+ R+ +C I +A + S+
Sbjct: 848 TRRLSSPRSLVLNQIRHSPFGGKSQQAQQRWRSRGYRCIGGIMYRVSANKL---SKTYSI 904
Query: 372 PGVGRNKRKASRGEEGISSFSASLDDSTVQKEVVKQRVTQEQGITTKDKLDSGACNKRKR 431
P KAS G S + LD T + R Q
Sbjct: 905 P------LKASDGSTRYLSRTGHLDPLTATSRSIASRAVQR------------------- 939
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGV--RRLKLPQNLKPKTVKYCHHYLKGRCQEGD- 488
+L+ ++A+++++++K + G R L P P V C +L+G C++ D
Sbjct: 940 -SLAIIRQARQRKEKKKDYCMYYNRFGRCNRGLSCPYIHDPDKVAVCTRFLRGTCKKTDG 998
Query: 489 KCKFSH----DTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP---CENFVAKGFCN 541
C FSH D +P+ C +F + C NCP+ H C++F+ KG+C
Sbjct: 999 SCPFSHKVSKDKMPV------CSYFLKGICSN-SNCPYSHVYVSRKAEVCQDFL-KGYCP 1050
Query: 542 RGDNCLFSHKL 552
G+ C H L
Sbjct: 1051 MGEKCKKKHTL 1061
>gi|449277686|gb|EMC85778.1| Zinc finger CCCH domain-containing protein 4 [Columba livia]
Length = 759
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
C ++++GRC GD C FSHD + L K + C + C + +NCP+ HD+
Sbjct: 260 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGYCARAENCPYMHDI 309
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDL---SKYPCENFVAKGFCNRGDNCLFSHKL 552
C +F C GD+C F HD+ K F G+C R +NC + H +
Sbjct: 260 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGYCARAENCPYMHDI 309
>gi|154280180|ref|XP_001540903.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412846|gb|EDN08233.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|225562900|gb|EEH11179.1| mRNA 3'-end-processing protein yth1 [Ajellomyces capsulatus G186AR]
gi|240279725|gb|EER43230.1| mRNA 3'-end-processing protein yth1 [Ajellomyces capsulatus H143]
gi|325092854|gb|EGC46164.1| mRNA 3'-end-processing protein yth1 [Ajellomyces capsulatus H88]
Length = 251
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-------------VPLTKSTKACCHFARNSCMKGDN 519
V C Y +G C G C H T T T C HF + C KG
Sbjct: 43 VPVCKAYREGHCPLGPTCPDRHPTPSRISTATSPAMPAASTHGTLVCKHFLKGLCKKGIK 102
Query: 520 CPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
C + H+ L + P C+NF G+C GD CL+ H P+E P
Sbjct: 103 CEYLHEYNLRRMPECQNFSRTGYCPNGDECLYQHV--PEEAKIP 144
Score = 47.0 bits (110), Expect = 0.052, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+LKG C++G KC++ H+ + C +F+R C GD C + H + +K P C
Sbjct: 89 CKHFLKGLCKKGIKCEYLHEYN--LRRMPECQNFSRTGYCPNGDECLYQHVPEEAKIPLC 146
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ +G C G C H
Sbjct: 147 EHY-ERGLCALGPLCAKKH 164
>gi|164659544|ref|XP_001730896.1| hypothetical protein MGL_1895 [Malassezia globosa CBS 7966]
gi|159104794|gb|EDP43682.1| hypothetical protein MGL_1895 [Malassezia globosa CBS 7966]
Length = 197
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 476 CHHYLKGRCQEGDKCKFSH-----DTVPLTKST-----KACCHFARNSCMKGDNCPFDH- 524
C + +GRC+ G +C H +P ++S C H+ R C KGD C + H
Sbjct: 87 CPRFKRGRCELGSQCTLRHCITPSPAIPTSQSRDVSRRTVCKHWLRGLCKKGDLCDYLHE 146
Query: 525 -DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
DL + P C + GFCN D CL+ H P
Sbjct: 147 YDLRRMPECRFYATFGFCNSSDECLYIHIDP 177
>gi|237681208|ref|NP_001153741.1| cleavage and polyadenylation specific factor 4, 30kDa [Tribolium
castaneum]
gi|270004678|gb|EFA01126.1| hypothetical protein TcasGA2_TC010339 [Tribolium castaneum]
Length = 280
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 37/158 (23%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------STKACCH 508
C H+L+G C++GD+C+F H+ +TK K C
Sbjct: 69 CKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSRFNACHNKECPFLHIDPESKIKDCPW 127
Query: 509 FARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPE 568
+ R C G +C H + + C N++A GFC G NC + H P+ + P P +
Sbjct: 128 YDRGFCRHGPHCRHRH-VRRVLCTNYLA-GFCPEGPNCKYMH---PRFELPAPPDQVQKD 182
Query: 569 LKPSPPLYA----SNLLKPLNNNKVSHQNVDALSNHGK 602
K +P + + K ++ NK++ N DAL++ +
Sbjct: 183 KKATPVIICHFCNEHGHKAIHCNKMNSDNRDALNDENR 220
>gi|449547958|gb|EMD38925.1| hypothetical protein CERSUDRAFT_92961 [Ceriporiopsis subvermispora
B]
Length = 415
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 460 RRLKLPQNLKPKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD 518
R L P P + C ++L+G C + C SHD P + T C HFA N
Sbjct: 195 RGLTCPYQHDPAKIAICWNFLQGNCPNTAETCPLSHDPTP--ERTPLCVHFANNGRCTRA 252
Query: 519 NCPFDH---DLSKYPCENFVAKGFCNRGDNC 546
NCPF H C +F G+C +G +C
Sbjct: 253 NCPFPHVRVGQRDGVCRDFAVLGYCEKGLDC 283
>gi|344246545|gb|EGW02649.1| Zinc finger CCCH domain-containing protein 4 [Cricetulus griseus]
Length = 877
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
C ++++GRC GD C FSHD + L K + C + C + +NCP+ HD+
Sbjct: 342 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMHDI 391
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDL---SKYPCENFVAKGFCNRGDNCLFSHKL 552
C +F C GD+C F HD+ K F GFC R +NC + H +
Sbjct: 342 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHDI 391
>gi|281341450|gb|EFB17034.1| hypothetical protein PANDA_011111 [Ailuropoda melanoleuca]
Length = 809
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLS--KYP 530
YC +Y + GRC G C + HD C F R +C K D CPF H +S K P
Sbjct: 654 YCMYYNRFGRCNHGQHCPYIHD----PDKVAVCTRFLRGTCKKTDGTCPFSHHVSKEKMP 709
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ +C +SH
Sbjct: 710 VCSYFLKGICS-NSSCPYSH 728
>gi|167377692|ref|XP_001734501.1| mRNA 3'-end-processing protein YTH1 [Entamoeba dispar SAW760]
gi|165903960|gb|EDR29338.1| mRNA 3'-end-processing protein YTH1, putative [Entamoeba dispar
SAW760]
Length = 166
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 470 PKTVK------YCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
P+T+K C H+L+G C++G C F H + T AC HF + + CPF
Sbjct: 16 PRTIKSNEKTIVCQHWLRGMCRKGANCDFLHRLD--EERTPACHHFVKYGKCEKPECPFK 73
Query: 524 HD--LSKYPCENFVAKGFCNRGDNCLFSH 550
H+ PCE + +GFC G C H
Sbjct: 74 HEDPQKAIPCE-WYKRGFCKHGKKCKHGH 101
Score = 40.4 bits (93), Expect = 4.3, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 496 TVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKL 552
T+ + T C H+ R C KG NC F H D + P C +FV G C + + C F H+
Sbjct: 18 TIKSNEKTIVCQHWLRGMCRKGANCDFLHRLDEERTPACHHFVKYGKCEKPE-CPFKHED 76
Query: 553 PPK 555
P K
Sbjct: 77 PQK 79
>gi|355568881|gb|EHH25162.1| hypothetical protein EGK_08934 [Macaca mulatta]
gi|355754343|gb|EHH58308.1| hypothetical protein EGM_08126 [Macaca fascicularis]
Length = 179
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C+ + KG C++G C F HD + C H+ R C KGD+C F H D+++ P
Sbjct: 41 CNFFAKGLCEKGKLCPFRHDR---GEKMVVCKHWLRGLCKKGDHCKFLHQYDITRMPECY 97
Query: 534 FVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
F +K G C+ + C F H P K QD P
Sbjct: 98 FYSKFGDCSNKE-CPFLHVKPAFKSQDCP 125
Score = 48.9 bits (115), Expect = 0.013, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 26/102 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSH--DTVPLTK----------STKACCHFARNSCMKGDNCPF- 522
C H+L+G C++GD CKF H D + + S K C K +CP+
Sbjct: 68 CKHWLRGLCKKGDHCKFLHQYDITRMPECYFYSKFGDCSNKECPFLHVKPAFKSQDCPWY 127
Query: 523 ------DHDLSKYP------CENFVAKGFCNRGDNCLFSHKL 552
D L KY C N++ GFC G C FS K+
Sbjct: 128 DQGFCKDGPLCKYRHVPRIMCLNYLV-GFCPEGPKCRFSQKI 168
Score = 45.8 bits (107), Expect = 0.10, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 499 LTKSTKACCHF-ARNSCMKGDNCPFDHDLSK--YPCENFVAKGFCNRGDNCLFSHK 551
+ KS A C+F A+ C KG CPF HD + C++++ +G C +GD+C F H+
Sbjct: 33 MDKSASAVCNFFAKGLCEKGKLCPFRHDRGEKMVVCKHWL-RGLCKKGDHCKFLHQ 87
>gi|407034648|gb|EKE37314.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 178
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 470 PKTVK------YCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
P+T+K C H+L+G C++G C F H + T AC HF + + CPF
Sbjct: 28 PRTIKSNEKTIVCQHWLRGMCRKGANCDFLHRLD--EERTPACHHFVKYGKCEKPECPFK 85
Query: 524 HD--LSKYPCENFVAKGFCNRGDNCLFSH 550
H+ PCE + +GFC G C H
Sbjct: 86 HEDPQKAIPCE-WYKRGFCKHGKKCKHGH 113
Score = 40.4 bits (93), Expect = 4.3, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 496 TVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKY---PCENFVAKGFCNRGDNCLFSHKL 552
T+ + T C H+ R C KG NC F H L + C +FV G C + + C F H+
Sbjct: 30 TIKSNEKTIVCQHWLRGMCRKGANCDFLHRLDEERTPACHHFVKYGKCEKPE-CPFKHED 88
Query: 553 PPK 555
P K
Sbjct: 89 PQK 91
>gi|300706101|ref|XP_002995357.1| hypothetical protein NCER_101790 [Nosema ceranae BRL01]
gi|239604401|gb|EEQ81686.1| hypothetical protein NCER_101790 [Nosema ceranae BRL01]
Length = 145
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 498 PLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
P T C F N+C +GDNC + HD +++PC+ F + C R NC+FSH
Sbjct: 69 PFNYRTLLCKFFLVNACTRGDNCAYSHDTTQFPCKAFFLRQNCKRK-NCMFSH 120
>gi|154308824|ref|XP_001553747.1| hypothetical protein BC1G_07940 [Botryotinia fuckeliana B05.10]
gi|347838641|emb|CCD53213.1| hypothetical protein [Botryotinia fuckeliana]
Length = 487
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L KG C GD C SHD P + T C HFA+ +C D C + H
Sbjct: 315 PSKVGVCKAFLLKGECPNGDSCDLSHDLTP--ERTPNCLHFAKGNCSNSD-CRYTHVRVS 371
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C +F G+C++G C H
Sbjct: 372 PTAMVCRSFGIYGYCDKGTTCTERH 396
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 513 SCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDP 559
+C KG C + HD SK C+ F+ KG C GD+C SH L P E+ P
Sbjct: 302 TCNKGPKCRYIHDPSKVGVCKAFLLKGECPNGDSCDLSHDLTP-ERTP 348
>gi|67483862|ref|XP_657151.1| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|56474390|gb|EAL51762.1| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449708917|gb|EMD48290.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 178
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 470 PKTVK------YCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
P+T+K C H+L+G C++G C F H + T AC HF + + CPF
Sbjct: 28 PRTIKSNEKTIVCQHWLRGMCRKGANCDFLHRLD--EERTPACHHFVKYGKCEKPECPFK 85
Query: 524 HD--LSKYPCENFVAKGFCNRGDNCLFSH 550
H+ PCE + +GFC G C H
Sbjct: 86 HEDPQKAIPCE-WYKRGFCKHGKKCKHGH 113
Score = 40.4 bits (93), Expect = 4.5, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 496 TVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKY---PCENFVAKGFCNRGDNCLFSHKL 552
T+ + T C H+ R C KG NC F H L + C +FV G C + + C F H+
Sbjct: 30 TIKSNEKTIVCQHWLRGMCRKGANCDFLHRLDEERTPACHHFVKYGKCEKPE-CPFKHED 88
Query: 553 PPK 555
P K
Sbjct: 89 PQK 91
>gi|294894906|ref|XP_002775011.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239880794|gb|EER06827.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 332
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 421 LDSGACNKRKRSALSKEKKAKKKQKERKKRA--EKNRQLGVRRLKLPQNLKPKTVKYCHH 478
L+S + + +RSA + K R E N +R + L ++L K C
Sbjct: 18 LNSPSATQMRRSATEPSSRPSPAHGSNKGRGHGEGNDNKKLRPVDLSKHLL--KTKVCSL 75
Query: 479 YLKGRCQEGDKCKFSHDTV-----PLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
YL+GRC G KC F+H T P K T C + + C KG C + H ++
Sbjct: 76 YLEGRCHYGSKCFFAHSTSELQQQPNLKKTSLCRLYRQGKCNKGAACTYAHSAAELRATE 135
Query: 534 ------FVAKGFCNRGDNCLFSH-----KLPPK 555
+ G C+ G C F+H + PPK
Sbjct: 136 KTVMCIWWLSGHCSHGSKCRFAHGEAELRSPPK 168
>gi|310790674|gb|EFQ26207.1| hypothetical protein GLRG_01351 [Glomerella graminicola M1.001]
Length = 432
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query: 436 KEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKT-----------------VKYCHH 478
K ++K R + RQ GV+++ +P ++ T V C
Sbjct: 219 KFHRSKTGNLYRAGVLKAQRQNGVKKVDVPCSMFSLTGSCAKGPACRYVHDASRVAVCRE 278
Query: 479 YL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP----CEN 533
L KG C G+ C SHD P + T C HF + +C NCP+ H S P C +
Sbjct: 279 LLHKGNCANGESCDLSHDLTP--QRTPTCVHFIKGNCAN-PNCPYAHS-SVSPGALVCRS 334
Query: 534 FVAKGFCNRGDNC 546
F G+C++GD C
Sbjct: 335 FGMYGYCDKGDEC 347
>gi|119609527|gb|EAW89121.1| hCG1641439 [Homo sapiens]
Length = 143
Score = 53.9 bits (128), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH- 524
Q + C+ + KG C++G C F HD + C H+ R C KGD+C F H
Sbjct: 31 QGMDKSASAVCNFFTKGLCEKGKLCPFRHDR---GEKMVVCKHWLRGLCKKGDHCKFLHQ 87
Query: 525 -DLSKYPCENFVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
DL++ P F +K G C+ + C F H P K QD P
Sbjct: 88 YDLTRMPECYFYSKFGDCSNKE-CSFLHVKPAFKSQDCP 125
>gi|67516033|ref|XP_657902.1| hypothetical protein AN0298.2 [Aspergillus nidulans FGSC A4]
gi|74599076|sp|Q5BGN2.1|YTH1_EMENI RecName: Full=mRNA 3'-end-processing protein yth1
gi|40746548|gb|EAA65704.1| hypothetical protein AN0298.2 [Aspergillus nidulans FGSC A4]
gi|259489475|tpe|CBF89777.1| TPA: mRNA 3'-end-processing protein yth1
[Source:UniProtKB/Swiss-Prot;Acc:Q5BGN2] [Aspergillus
nidulans FGSC A4]
Length = 254
Score = 53.9 bits (128), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP-LTKSTKA--------------CCHFARNSCMKG 517
V C Y +G C G C H T +T ST C HF + C KG
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKG 103
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 104 MKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCEH 151
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLSKY---PC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 92 CKHFLKGLCKKGMKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPC 149
Query: 532 ENFVAKGFCNRGDNCLFSH---KLPPKEQDPPTPSTCTPELKPSPPLYASNLLKP 583
E++ +GFC G C H +L P P P + P ++ NL KP
Sbjct: 150 EHY-DQGFCPLGPLCAKRHVRRRLCPYYVAGFCPE--GPNCANAHPRWSENLPKP 201
>gi|345561432|gb|EGX44521.1| hypothetical protein AOL_s00188g189 [Arthrobotrys oligospora ATCC
24927]
Length = 332
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CE 532
C +L G C G+ C H + C H+ R C KGD C F H+ L + P C
Sbjct: 122 CRLFLAGHCPNGNACPDRHTVGTAGLNNLVCKHWLRGLCKKGDACDFLHEYNLRRMPECS 181
Query: 533 NFVAKGFCNRGDNCLFSHKLP 553
+ G+C GD+CL+ H P
Sbjct: 182 FLIRYGYCQNGDDCLYFHPDP 202
>gi|320165321|gb|EFW42220.1| zinc finger protein [Capsaspora owczarzaki ATCC 30864]
Length = 184
Score = 53.9 bits (128), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYP-CE 532
C +L+G+C++G+ C F H T C H+ R C KG++C F H D+SK P C
Sbjct: 42 CKLFLRGQCKKGNSCAFRHTR---TDKKVVCKHWLRGLCKKGEHCEFLHEYDMSKMPECY 98
Query: 533 NFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
F G C + C + H P K++D P
Sbjct: 99 FFQKYGQCTNTE-CQYRHIDPETKKKDCP 126
Score = 46.6 bits (109), Expect = 0.058, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 33/113 (29%)
Query: 476 CHHYLKGRCQEGDKCKFSHD---------------------------TVPLTKSTKACCH 508
C H+L+G C++G+ C+F H+ P TK K C
Sbjct: 69 CKHWLRGLCKKGEHCEFLHEYDMSKMPECYFFQKYGQCTNTECQYRHIDPETKK-KDCPW 127
Query: 509 FARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLPPKEQD 558
+AR C G C H + C N++ GFC G C F+H +P ++ D
Sbjct: 128 YARGFCRHGAQCKLRHR-KRVICTNYLT-GFCPDGPTCQFAHPSWDIPMRDND 178
>gi|429964108|gb|ELA46106.1| hypothetical protein VCUG_02414 [Vavraia culicis 'floridensis']
Length = 239
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 503 TKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHK 551
++ C F +SC KGD C + HD+ ++PC+ F K C R NC+FSH+
Sbjct: 167 SQVCKFFLTHSCTKGDACSYSHDVKRFPCKAFHVKRNCTRK-NCMFSHE 214
>gi|326520181|dbj|BAK04015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 461 RLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
R + PQN K ++ C+ + KG C GD C+FSHD + C F + C +G +C
Sbjct: 177 RHRGPQN-KGESRGVCYAFQKGECSRGDSCRFSHDEQVAAQGRGVCYAFQKGECSRGASC 235
Query: 521 PFDHD 525
F HD
Sbjct: 236 RFSHD 240
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 43/105 (40%), Gaps = 31/105 (29%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTV-----------------------PLTK--STKACCHFA 510
C+ + KG C GD CK+SHD P K S C F
Sbjct: 136 CYAFQKGECNRGDACKYSHDEQRNANTGWGSKEDDPKWEHDRHRGPQNKGESRGVCYAFQ 195
Query: 511 RNSCMKGDNCPFDHD-----LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C +GD+C F HD + C F KG C+RG +C FSH
Sbjct: 196 KGECSRGDSCRFSHDEQVAAQGRGVCYAF-QKGECSRGASCRFSH 239
>gi|444722737|gb|ELW63414.1| Zinc finger CCCH domain-containing protein 3 [Tupaia chinensis]
Length = 438
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLS--KYP 530
YC +Y + GRC G +C + HD C F R +C K D CPF H +S K P
Sbjct: 156 YCTYYNRFGRCHRGQRCPYIHD----PDKVAVCTRFVRGTCKKTDGTCPFSHQVSKEKMP 211
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG C+ D C +SH
Sbjct: 212 VCSYFLKGVCSSSD-CPYSH 230
>gi|357123042|ref|XP_003563222.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Brachypodium distachyon]
Length = 385
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 32/106 (30%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTV-------------------------PLTKSTKACCH-F 509
C+ + KG C GD C++SHD P + C+ F
Sbjct: 136 CYAFQKGECNRGDACRYSHDEQRNANTGWGSKEDINPKWEHDRHRDPPNKGEFRGVCYAF 195
Query: 510 ARNSCMKGDNCPFDHD-----LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C +GD+C F HD ++ C F KG CNRG +C FSH
Sbjct: 196 QKGECSRGDSCRFSHDEQVAVQARGICYAF-QKGECNRGASCRFSH 240
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD 525
C+ + KG C GD C+FSHD ++ C F + C +G +C F HD
Sbjct: 192 CYAFQKGECSRGDSCRFSHDEQVAVQARGICYAFQKGECNRGASCRFSHD 241
>gi|389632125|ref|XP_003713715.1| CCCH zinc finger protein [Magnaporthe oryzae 70-15]
gi|351646048|gb|EHA53908.1| CCCH zinc finger protein [Magnaporthe oryzae 70-15]
Length = 452
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 470 PKTVKYCHHYL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L KG C GD C SH+ P + T AC HFA+ +C C + H
Sbjct: 283 PLKVAICKDFLLKGDCIGGDSCDLSHEPTP--ERTPACLHFAKGNC-NNPQCRYTHVQVT 339
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
C +F G+CN+G NC
Sbjct: 340 PGSLVCRDFGIYGYCNKGSNC 360
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 498 PLTKSTKACCHFAR-NSCMKGDNCPFDHD-LSKYPCENFVAKGFCNRGDNCLFSHKLPPK 555
P+ K C F+ SC KG C + HD L C++F+ KG C GD+C SH+ P
Sbjct: 254 PVRKVQTPCRMFSTTGSCTKGPLCRYQHDPLKVAICKDFLLKGDCIGGDSCDLSHE-PTP 312
Query: 556 EQDP 559
E+ P
Sbjct: 313 ERTP 316
>gi|281350493|gb|EFB26077.1| hypothetical protein PANDA_013673 [Ailuropoda melanoleuca]
Length = 236
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKL 552
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H +
Sbjct: 146 KGKQVCKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNI 200
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 43/118 (36%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPL-------TKSTKA----------------CCHFARN 512
C +Y KG+C+ G C+F H P +S KA C +F R
Sbjct: 344 CENYQKGKCKRGAACRFRHVAAPAEGYQEPEEESWKAPARVALPVAAVAEVAVCRNFQRG 403
Query: 513 SCMKGDNCPFDH--------------DLSKYP------CENFVAKGFCNRGDNCLFSH 550
SCM+G +C F H ++S+Y C N+ + G C RG+NC F H
Sbjct: 404 SCMRGASCRFAHTGQAPQAAPATAVEEVSEYQKRFQSVCYNWQSTGSCARGENCPFQH 461
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 52/167 (31%), Gaps = 76/167 (45%)
Query: 476 CHHYLKGRCQEGDKCKFSH----------------------------------DTVPLTK 501
CH + +G+C GD CKF+H T P+T+
Sbjct: 216 CHKFQQGQCTRGDACKFAHVMQDQDAEELVQPAERPVSGIATPGASLGAVESESTGPMTE 275
Query: 502 STKA------CCHFARNSCMKGDNCPFDH------------------------------- 524
T+A C +F + C +G C F H
Sbjct: 276 QTQATSDAPVCINFQKGKCKRGAACKFQHLHGNGNDEMSLEENVKMETVRQDAAPEEEET 335
Query: 525 --DLSKYPCENFVAKGFCNRGDNCLFSHKLPPKE--QDPPTPSTCTP 567
D CEN+ KG C RG C F H P E Q+P S P
Sbjct: 336 QADEGAPVCENY-QKGKCKRGAACRFRHVAAPAEGYQEPEEESWKAP 381
>gi|402900921|ref|XP_003913409.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Papio anubis]
Length = 179
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C+ + KG C++G C F HD + C H+ R C KGD+C F H D+++ P
Sbjct: 41 CNFFAKGLCEKGKLCPFRHDR---GEKMVVCKHWLRGLCKKGDHCKFLHQYDITRMPECY 97
Query: 534 FVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
F +K G C+ + C F H P K QD P
Sbjct: 98 FYSKFGDCSNKE-CPFLHVKPAFKSQDCP 125
Score = 48.5 bits (114), Expect = 0.018, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 26/102 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSH--DTVPLTK----------STKACCHFARNSCMKGDNCPF- 522
C H+L+G C++GD CKF H D + + S K C K +CP+
Sbjct: 68 CKHWLRGLCKKGDHCKFLHQYDITRMPECYFYSKFGDCSNKECPFLHVKPAFKSQDCPWY 127
Query: 523 ------DHDLSKYP------CENFVAKGFCNRGDNCLFSHKL 552
D L KY C N++ GFC G C FS K+
Sbjct: 128 DQGFCKDGPLCKYRHVPRIMCLNYLV-GFCPEGPKCRFSQKI 168
Score = 45.4 bits (106), Expect = 0.13, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 499 LTKSTKACCHF-ARNSCMKGDNCPFDHDLSK--YPCENFVAKGFCNRGDNCLFSHK 551
+ KS A C+F A+ C KG CPF HD + C++++ +G C +GD+C F H+
Sbjct: 33 MDKSASAVCNFFAKGLCEKGKLCPFRHDRGEKMVVCKHWL-RGLCKKGDHCKFLHQ 87
>gi|440300652|gb|ELP93099.1| mRNA 3'-end-processing protein YTH1, putative [Entamoeba invadens
IP1]
Length = 160
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 465 PQNLKP--KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
P+ +KP KTV C H+L+G C+ G+ C + H+ L K T C HF + CPF
Sbjct: 29 PKTIKPNEKTV-VCSHWLRGSCKLGNNCGYLHE-YDLDK-TPMCNHFEKYGKCDKPECPF 85
Query: 523 DHDL-SKYPCENFVAKGFCNRGDNCLFSHKLPPKE 556
H+ S P + +GFC+RG C H L PK+
Sbjct: 86 RHEAPSNSPKCEWYIRGFCSRGKKC---HNLHPKK 117
Score = 41.2 bits (95), Expect = 2.8, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 485 QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYP-CENFVAKGFCN 541
E ++ K T+ + T C H+ R SC G+NC + H DL K P C +F G C+
Sbjct: 20 HETEQPKRDPKTIKPNEKTVVCSHWLRGSCKLGNNCGYLHEYDLDKTPMCNHFEKYGKCD 79
Query: 542 RGDNCLFSHKLP 553
+ + C F H+ P
Sbjct: 80 KPE-CPFRHEAP 90
>gi|19074760|ref|NP_586266.1| putative zinc finger protein [Encephalitozoon cuniculi GB-M1]
gi|19069402|emb|CAD25870.1| putative zinc finger protein [Encephalitozoon cuniculi GB-M1]
gi|449329926|gb|AGE96194.1| putative zinc finger protein [Encephalitozoon cuniculi]
Length = 118
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 503 TKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHK 551
T C F NSC GD+C + HD SK+PC+ F KG C R D C FSH+
Sbjct: 44 TILCKFFLMNSCKHGDSCTYSHDTSKFPCKAFHLKGNCTRKD-CPFSHE 91
>gi|330932150|ref|XP_003303670.1| hypothetical protein PTT_15981 [Pyrenophora teres f. teres 0-1]
gi|311320199|gb|EFQ88253.1| hypothetical protein PTT_15981 [Pyrenophora teres f. teres 0-1]
Length = 340
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 39/182 (21%)
Query: 409 VTQEQGITTKDKLDSGACNKRKRSALSKEKKAKKK---QKERKKRAEKNRQLGVRRLKLP 465
Q+Q K SG KR A K ++ K+K ++ RK+ AE + + V+ K+P
Sbjct: 30 AAQKQIAQIKATAASGGSPDEKRKAAEKLQREKEKLAAEQARKETAELFKPVQVQ--KVP 87
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCH--------FARNSCMKG 517
PKTV C + KG C++G KCKFSHD K+ K + K
Sbjct: 88 FGTDPKTV-LCQFFKKGNCEKGKKCKFSHDLAIERKTEKRSLYTDSRDQEKEEEEERRKK 146
Query: 518 DNCP-FDHD------LSKY---------PCENFVAK---------GFCNRGDNCLFSHKL 552
DN +D D LSK+ C+ F+A C GD C++ H L
Sbjct: 147 DNMDNWDEDKLRQVVLSKHGNPKTTTDKVCKYFIAAIEDQKYGWFWICPNGDKCMYKHSL 206
Query: 553 PP 554
PP
Sbjct: 207 PP 208
>gi|255951282|ref|XP_002566408.1| Pc22g25210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593425|emb|CAP99809.1| Pc22g25210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 256
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP-LTKSTKA--------------CCHFARNSCMKG 517
V C Y +G C G C H T +T ST C HF + C KG
Sbjct: 46 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGMAPSTTHGSLVCKHFLKGLCKKG 105
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 106 LKCEYLHEYNLRRMPECQSFSRSGYCTNGDDCLYQHVREEARLPPCEH 153
Score = 48.9 bits (115), Expect = 0.013, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH---DLSKYPC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 94 CKHFLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRSGYCTNGDDCLYQHVREEARLPPC 151
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ +G+C G C H
Sbjct: 152 EHY-DRGYCELGPLCAKRH 169
>gi|307104178|gb|EFN52433.1| hypothetical protein CHLNCDRAFT_138954 [Chlorella variabilis]
Length = 233
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 467 NLKPKTVKY----CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
N +PK Y C ++L+G C +GD C F H P + C + K +CP+
Sbjct: 33 NAEPKPRNYRQTVCTYWLRGLCMKGDTCGFLHQFDP--ERMPVCRSLLKFGVCKEPDCPY 90
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH--KLPPKEQDPPTPST 564
H L N GFC G C F H +L P PP P T
Sbjct: 91 KHTLEAIKECNMYKLGFCIYGPACRFKHTRQLAP----PPDPET 130
>gi|321261896|ref|XP_003195667.1| hypothetical protein CGB_H2160W [Cryptococcus gattii WM276]
gi|317462141|gb|ADV23880.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 496
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 462 LKLPQNLKPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
L LP++ P+ + C ++ K GRC++G CK HD AC +F R C G C
Sbjct: 235 LTLPKSNVPRKGQLCPYFSKTGRCRKGHICKAIHD----PDRVAACPNFLRGRCELGPIC 290
Query: 521 PFDHDLSKY---PCENFVAKGFCNRGDNCLFSH 550
P H+ S + C F A +C R NC + H
Sbjct: 291 PLSHNPSAHNTPSCTRFQALSYCTR-PNCPYPH 322
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 40/110 (36%), Gaps = 29/110 (26%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH----- 524
P V C ++L+GRC+ G C SH+ P +T +C F S NCP+ H
Sbjct: 270 PDRVAACPNFLRGRCELGPICPLSHN--PSAHNTPSCTRFQALSYCTRPNCPYPHVKVSN 327
Query: 525 ----------------------DLSKYPCENFVAKGFCNRGDNCLFSHKL 552
L Y C F + G C RG C H L
Sbjct: 328 DAPICEDFAFTGWCDTAEGECPYLHSYDCPEFWSTGKCPRGAKCKLRHTL 377
>gi|348533173|ref|XP_003454080.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Oreochromis niloticus]
Length = 425
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 474 KYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KY 529
+YC +Y + G+C G C F HD C F R +C + D CPF H ++ K
Sbjct: 131 QYCMYYNRFGKCNRGTSCPFIHD----PDKVAVCTRFLRGTCKQADGTCPFSHKVAKEKM 186
Query: 530 PCENFVAKGFCNRGDNCLFSH 550
P ++ KG CN D C +SH
Sbjct: 187 PVCSYFLKGICNNSD-CPYSH 206
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C D C +SH V +++ + C F + C +G+ C H L C +F
Sbjct: 189 CSYFLKGICNNSD-CPYSH--VYVSRKAEVCQDFVKGYCPEGEKCKKKHTLV---CPDFS 242
Query: 536 AKGFCNRGDNCLFSHK 551
G C G C H+
Sbjct: 243 KTGSCPHGSRCKLQHR 258
>gi|367020802|ref|XP_003659686.1| hypothetical protein MYCTH_2297028 [Myceliophthora thermophila ATCC
42464]
gi|347006953|gb|AEO54441.1| hypothetical protein MYCTH_2297028 [Myceliophthora thermophila ATCC
42464]
Length = 485
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L+ G C GD C SH+ P + T C HFAR++C K D C + H
Sbjct: 313 PHKVAICKDFLQQGECPSGDNCDLSHEPTP--ERTPTCLHFARDNCTKPD-CKYAHVKVS 369
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C +F G+C +G C H
Sbjct: 370 PAAPVCRDFGFYGYCQKGAGCSDRH 394
>gi|334322934|ref|XP_001378504.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Monodelphis domestica]
Length = 312
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 456 QLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCM 515
Q GV L P + V C +LKG C++G C F HD + T C H+ R C
Sbjct: 22 QRGVGYLPFP-GMDKSGVAVCTFFLKGFCEKGQLCPFRHDD---GEKTVVCKHWLRGLCK 77
Query: 516 KGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
K D+C F H D++K P C + G C+ + CLF H P
Sbjct: 78 KSDHCKFLHQYDITKMPECYFYSKFGECSNKE-CLFLHADP 117
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 29/105 (27%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK-------------STKACCHFARNSCMKG 517
KTV C H+L+G C++ D CKF H +TK S K C + K
Sbjct: 64 KTV-VCKHWLRGLCKKSDHCKFLHQ-YDITKMPECYFYSKFGECSNKECLFLHADPAFKI 121
Query: 518 DNCP-FDHDLSKYP------------CENFVAKGFCNRGDNCLFS 549
+CP +D KY C N++ GFC G +C F+
Sbjct: 122 RDCPWYDQGFCKYGLLCKFRHTRRVLCTNYLV-GFCPEGPDCKFT 165
>gi|320591618|gb|EFX04057.1| ccch zinc finger DNA-binding protein [Grosmannia clavigera kw1407]
Length = 410
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L KG C GD C SH+ + T C H+A+ SC NCP+ H
Sbjct: 238 PVKVAVCKEFLQKGHCASGDDCDLSHELT--AERTPFCLHYAKGSCTN-PNCPYTHSEVS 294
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
C F G+C +G +CL H
Sbjct: 295 TGALVCRPFGLYGYCEKGADCLERH 319
>gi|449016115|dbj|BAM79517.1| similar to cleavage and polyadenylation specific factor 4, 30kD
subunit [Cyanidioschyzon merolae strain 10D]
Length = 188
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 34/138 (24%)
Query: 444 QKERKKRAEKNRQLGVRRLKLPQNLKP-KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKS 502
Q E++ E + G+ + + P K C +L+ RC+ GD C++ H +KS
Sbjct: 5 QNEQEIIYEFEKYTGLAQQEYDDQTAPGKDTDICQAWLENRCERGDLCQYRHSR---SKS 61
Query: 503 TKACCHFARNSCMKGDNCPFDH--DLSKYP----------CEN----------------- 533
C H+ R C KG C F H +L K P C N
Sbjct: 62 LIVCKHWLRGLCKKGIECEFVHRFELDKMPECFFFSRYGECTNDECMYRHVVADSRRMEC 121
Query: 534 -FVAKGFCNRGDNCLFSH 550
F A+GFC G C + H
Sbjct: 122 PFYARGFCKHGPRCRYKH 139
Score = 49.3 bits (116), Expect = 0.008, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 28/108 (25%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSH----DTVP---------------------LTKST 503
+ K++ C H+L+G C++G +C+F H D +P + S
Sbjct: 58 RSKSLIVCKHWLRGLCKKGIECEFVHRFELDKMPECFFFSRYGECTNDECMYRHVVADSR 117
Query: 504 KACCHF-ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
+ C F AR C G C + H + K C N++ GFC +G C F H
Sbjct: 118 RMECPFYARGFCKHGPRCRYKH-VQKVACANYLG-GFCPKGPACRFGH 163
>gi|300121444|emb|CBK21963.2| unnamed protein product [Blastocystis hominis]
Length = 291
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 435 SKEKKAKKKQKERKKRAEKNRQLGV----RRLKLPQNLKPKTVKYCHHYLKGRCQEGDKC 490
+K+KK++K + + KK RQ + +R+K+ C + +GRC D C
Sbjct: 83 TKQKKSEKTKNQTKKPTRLERQAELVETQKRMKM--------ATECKFFKRGRCHRKD-C 133
Query: 491 KFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
+F HD P C + +N NC + HD K C F C RGD C FSH
Sbjct: 134 EFLHDGPP-----PLCYNILKNGVCTEPNCIYSHDPKKVGCMFFHITHNCTRGDKCKFSH 188
>gi|440792875|gb|ELR14083.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 215
Score = 53.1 bits (126), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 476 CHHY-LKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH----DLSKYP 530
C Y + GRC G +C + H + + C F+R C +GD CP+ H D +
Sbjct: 19 CRDYRMTGRCSRGSRCIYIHAMEEPLEKRELCRDFSRGYCARGDLCPYSHRMVDDAPRDV 78
Query: 531 CENFVAKGFCNRGDNCLFSH 550
C +F+ +G C RG C + H
Sbjct: 79 CRDFM-RGLCTRGSRCPYMH 97
>gi|406866037|gb|EKD19077.1| ccch zinc finger DNA-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 415
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V CH ++K G C GD C SH+ P + AC HF R +C K NC + H
Sbjct: 246 PLKVAVCHTFVKTGECPSGDSCDLSHELTP--QRMPACMHFLRGNCNKA-NCRYSHVRVS 302
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C+ F G+C +G +C H
Sbjct: 303 PTALVCKPFGNYGYCEKGLSCSERH 327
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 504 KACCHFA-RNSCMKGDNCPFDHD-LSKYPCENFVAKGFCNRGDNCLFSHKLPPK 555
K C F+ SC KG +CPF HD L C FV G C GD+C SH+L P+
Sbjct: 223 KPCRQFSITGSCSKGPDCPFIHDPLKVAVCHTFVKTGECPSGDSCDLSHELTPQ 276
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 473 VKYCHHY-LKGRCQEGDKCKFSHDTVPLTKSTKACCH-FARNS-CMKGDNCPFDHDLS-- 527
K C + + G C +G C F HD + + A CH F + C GD+C H+L+
Sbjct: 222 AKPCRQFSITGSCSKGPDCPFIHDPLKV-----AVCHTFVKTGECPSGDSCDLSHELTPQ 276
Query: 528 KYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTP 567
+ P C +F+ +G CN+ NC +SH + PT C P
Sbjct: 277 RMPACMHFL-RGNCNKA-NCRYSHV-----RVSPTALVCKP 310
>gi|300122914|emb|CBK23921.2| unnamed protein product [Blastocystis hominis]
Length = 291
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 435 SKEKKAKKKQKERKKRAEKNRQLGV----RRLKLPQNLKPKTVKYCHHYLKGRCQEGDKC 490
+K+KK++K + + KK RQ + +R+K+ C + +GRC D C
Sbjct: 83 TKQKKSEKTKNQTKKPTRLERQAELVETQKRMKM--------ATECKFFKRGRCHRKD-C 133
Query: 491 KFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
+F HD P C + +N NC + HD K C F C RGD C FSH
Sbjct: 134 EFLHDGPP-----PLCYNILKNGVCTEPNCIYSHDPKKVGCMFFHITHNCTRGDKCKFSH 188
>gi|440473977|gb|ELQ42746.1| CCCH zinc finger protein [Magnaporthe oryzae Y34]
gi|440485019|gb|ELQ65018.1| CCCH zinc finger protein [Magnaporthe oryzae P131]
Length = 492
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 470 PKTVKYCHHYL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L KG C GD C SH+ P + T AC HFA+ +C C + H
Sbjct: 323 PLKVAICKDFLLKGDCIGGDSCDLSHEPTP--ERTPACLHFAKGNC-NNPQCRYTHVQVT 379
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
C +F G+CN+G NC
Sbjct: 380 PGSLVCRDFGIYGYCNKGSNC 400
>gi|395512797|ref|XP_003760620.1| PREDICTED: zinc finger CCCH domain-containing protein 3
[Sarcophilus harrisii]
Length = 385
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + G+C G C + HD + C F R +C K D CPF H +S K P
Sbjct: 132 YCMYYNRFGKCNRGQHCPYIHD----PEKVAVCTRFLRGTCKKTDGTCPFSHHVSKEKMP 187
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG CN NC +SH
Sbjct: 188 VCSYFLKGICN-NSNCPYSH 206
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 470 PKTVKYCHHYLKGRCQEGD-KCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH-DLS 527
P+ V C +L+G C++ D C FSH + C +F + C NCP+ H +S
Sbjct: 154 PEKVAVCTRFLRGTCKKTDGTCPFSHHVS--KEKMPVCSYFLKGIC-NNSNCPYSHVYVS 210
Query: 528 KYP--CENFVAKGFCNRGDNCLFSHKL 552
K C +F+ KG+C G+ C H L
Sbjct: 211 KKAEVCVDFL-KGYCPMGEKCKKKHML 236
>gi|156054094|ref|XP_001592973.1| hypothetical protein SS1G_05895 [Sclerotinia sclerotiorum 1980]
gi|154703675|gb|EDO03414.1| hypothetical protein SS1G_05895 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 310
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK---ACCHFARNSCMKGDNCPFDHD--LSKYP 530
C YL+G C G C H T P C H+ R C KG+ C F H+ L K P
Sbjct: 105 CKAYLQGHCPLGSNCPDKHATNPNNTWNFNNMVCKHWLRGLCKKGETCEFLHEFNLRKMP 164
Query: 531 -CENFVAKGFCNRGDNCLFSHKLP 553
C FV G+C+ GD CL+ H P
Sbjct: 165 ECNFFVKNGYCSNGDECLYLHVDP 188
>gi|403167342|ref|XP_003327145.2| hypothetical protein PGTG_08922 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166970|gb|EFP82726.2| hypothetical protein PGTG_08922 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 331
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 33/156 (21%)
Query: 431 RSALSKEK----KAKKKQKERKKRAEKNRQLGVRRL--KLPQNLKPKTVKYCHHYLKGRC 484
+ A+SKEK K ++K++ERK+R E N ++ K+P PKTV C ++ G C
Sbjct: 27 KEAMSKEKARMDKEREKEQERKRREELNDIFKPVQVAQKVPFGTDPKTV-LCQYFKTGTC 85
Query: 485 QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD-------LSKYP------- 530
++G+KCKFSHD K+TK + + D D +SK+
Sbjct: 86 EKGNKCKFSHDLNVDRKTTKKDLYTDGRDTKETDTMDTWDDAKLQSVVISKHGNPKTTTE 145
Query: 531 --CENFVAK------GF---CNRGD-NCLFSHKLPP 554
C+NF+ G+ C G NC + H LPP
Sbjct: 146 IVCKNFIEAIESGKYGWFWECPSGGVNCKYRHALPP 181
>gi|119189407|ref|XP_001245310.1| hypothetical protein CIMG_04751 [Coccidioides immitis RS]
gi|392868216|gb|EAS33965.2| mRNA 3'-end-processing protein yth1 [Coccidioides immitis RS]
Length = 251
Score = 53.1 bits (126), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 21/106 (19%)
Query: 473 VKYCHHYLKGRCQEGDKC--------KFSHDTVPL-----TKSTKACCHFARNSCMKGDN 519
V C Y +G C G C + S T P T + C H+ + C KG
Sbjct: 43 VPVCKAYREGHCPLGPMCPDRHPTPSRISTATSPAIAPSSTHGSLVCKHYLKGLCKKGIK 102
Query: 520 CPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F G+C GD+CL+ H KLPP E
Sbjct: 103 CEYLHEYNLRRMPECQSFARSGYCANGDDCLYQHVSEEAKLPPCEH 148
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH---DLSKYPC 531
C HYLKG C++G KC++ H+ + C FAR+ C GD+C + H + PC
Sbjct: 89 CKHYLKGLCKKGIKCEYLHEYN--LRRMPECQSFARSGYCANGDDCLYQHVSEEAKLPPC 146
Query: 532 ENFVAKGFCNRGDNCLFSH---KLPPKEQDP--PTPSTCTPELKPSPPLYASNLLKP 583
E++ KGFC G C H K+ P P CT P P NL KP
Sbjct: 147 EHY-DKGFCPLGPLCAKKHVRRKICPFYLAGFCPEGRACTTGAHPRWP---ENLPKP 199
>gi|302829769|ref|XP_002946451.1| hypothetical protein VOLCADRAFT_86752 [Volvox carteri f.
nagariensis]
gi|300268197|gb|EFJ52378.1| hypothetical protein VOLCADRAFT_86752 [Volvox carteri f.
nagariensis]
Length = 544
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 45/132 (34%), Gaps = 53/132 (40%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPL----TKSTKACCHFARNSCMKGDNCPFDHDLSK 528
+ C + KG C GDKCK+SHD + +K C + RN C +G C F HDLS
Sbjct: 97 AQICFDFTKGVCSRGDKCKYSHDLATIVHFNSKEKGICFDYLRNQCHRGLLCRFSHDLSN 156
Query: 529 YP------------------------------------------------CENFVAKGFC 540
C +FV KG C
Sbjct: 157 IAQQCQVSWQFGNWQSIRFGRRFANSLNTNRLQVYSNGAKENKGAKPNAICYDFV-KGVC 215
Query: 541 NRGDNCLFSHKL 552
RG C +SH L
Sbjct: 216 QRGAECRYSHDL 227
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLT----------KSTKACCHFARNSCMKGD 518
KP + C+ ++KG CQ G +C++SHD + K+ + C + R C +G
Sbjct: 202 KPNAI--CYDFVKGVCQRGAECRYSHDLSLIARMARGGSAQPKAGEVCYDYLRGRCNRGA 259
Query: 519 NCPFDHDLSKYPCENFVAKGFCNRG 543
C + H+++ F+ + G
Sbjct: 260 TCKYSHNIAFLAAPGFLGSALSSDG 284
>gi|9711035|dbj|BAB07796.1| no arches [Danio rerio]
Length = 190
Score = 53.1 bits (126), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C ++++ C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEYFMRAACMKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P C + G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYTKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 47.8 bits (112), Expect = 0.029, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 35/131 (26%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------ST 503
KTV C H+L+G C++GD+C+F H+ +TK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYTKFGECSNKECPFLHIDPESKI 121
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQDP 559
K C + R C G +C H + C N++ GFC G +C F H +LP + P
Sbjct: 122 KDCPWYDRGFCKHGPDCRHRHT-RRVICVNYLV-GFCPEGKSCKFMHPRFELPMGATEQP 179
Query: 560 PTPSTCTPELK 570
P P + K
Sbjct: 180 PLPQQVQTQQK 190
>gi|340501726|gb|EGR28473.1| hypothetical protein IMG5_174580 [Ichthyophthirius multifiliis]
Length = 222
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 468 LKPKTVKYCHHYLKGRCQEGDKCKFSHDTV-PLTKSTKACCHFARNSCMKGDNCPFDHDL 526
+ + K C Y G C GD C+FSH T + C F R C G+NC + H+
Sbjct: 45 YETRQQKVCFDYQNGNCSYGDNCRFSHRTKNTYNQQRNECRAFQRGECKYGENCKYSHEK 104
Query: 527 SKYPCENFVAKGFCNRGDNCLFSHKLPPK 555
+ C +F G C G+NC +SH++ K
Sbjct: 105 RR-TCNDF-QNGNCKYGENCKYSHEIQQK 131
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 14/88 (15%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKY------ 529
C + +G C+ G+ CK+SH+ + C F +C G+NC + H++ +
Sbjct: 84 CRAFQRGECKYGENCKYSHE------KRRTCNDFQNGNCKYGENCKYSHEIQQKRTTQQT 137
Query: 530 -PCENFVAKGFCNRGDNCLFSHKLPPKE 556
PC +F+ G C G+NC FSH +E
Sbjct: 138 KPCRDFL-NGECKYGENCRFSHSQQAEE 164
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPL------------TKSTKACCHFARNSCMK 516
+ ++V+YC + C G+ CK++H P T+ K C + +C
Sbjct: 4 QQQSVRYCRAFQNDNCTYGENCKYAHQIQPKRQNENNEERRYETRQQKVCFDYQNGNCSY 63
Query: 517 GDNCPFDH------DLSKYPCENFVAKGFCNRGDNCLFSH 550
GDNC F H + + C F +G C G+NC +SH
Sbjct: 64 GDNCRFSHRTKNTYNQQRNECRAF-QRGECKYGENCKYSH 102
>gi|320591873|gb|EFX04312.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Grosmannia clavigera kw1407]
Length = 702
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTV-------------PLTKSTKACCHFARNSCMKGDNCPF 522
C Y G C G +C H + ++ C H+ R C KG+ C F
Sbjct: 420 CKAYSAGHCPLGPRCPDRHVSASSGHAGGGGGRDREGGFNSLVCKHWLRGLCKKGEGCEF 479
Query: 523 DHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
H+ L K P C F+ GFC+ GD CL+ H + P+ + PP P
Sbjct: 480 LHEYNLRKMPECNFFLRNGFCSNGDECLYLH-IDPRSKLPPCP 521
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++G+ C+F H+ + C F RN C GD C + H SK P C
Sbjct: 463 CKHWLRGLCKKGEGCEFLHEYN--LRKMPECNFFLRNGFCSNGDECLYLHIDPRSKLPPC 520
Query: 532 ENFVAKGFCNRGDNC 546
++ +GFC G C
Sbjct: 521 PDYDDRGFCALGPRC 535
>gi|2687591|gb|AAC53567.1| clipper/cleavage and polyadenylation specificity factor 30 kDa
subunit homolog [Mus musculus]
Length = 208
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 450 RAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF 509
R +QLG + L P + C +LK C +G C F H + + T C H+
Sbjct: 3 RIAVEQQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHW 58
Query: 510 ARNSCMKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
R C KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 59 LRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 112
Score = 44.7 bits (104), Expect = 0.22, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 51 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 107
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 108 IKDCPWYDRGFCKHGPLCRHRH 129
>gi|392571211|gb|EIW64383.1| hypothetical protein TRAVEDRAFT_158581 [Trametes versicolor
FP-101664 SS1]
Length = 280
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 34/132 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSHD--------------------------TVPLTKSTKACCHF 509
C H+L+G C++GD C+F H+ P + + C +
Sbjct: 91 CKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLYAHPKERRVE-CPDY 149
Query: 510 ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHK---LPP-KEQDPPTPSTC 565
R C G CP H + + C+ ++ GFC G +C H +PP K DPP P +
Sbjct: 150 NRGFCKLGPTCPRKH-VRRVACQLYLT-GFCPLGPDCPRGHPKPGIPPAKAYDPPEPPSV 207
Query: 566 TPELKPSPPLYA 577
+L P PP Y
Sbjct: 208 R-DLGPPPPGYG 218
>gi|148687045|gb|EDL18992.1| cleavage and polyadenylation specific factor 4, isoform CRA_a [Mus
musculus]
Length = 292
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 45 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 100
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 101 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 149
Score = 45.1 bits (105), Expect = 0.19, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 88 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 144
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 145 IKDCPWYDRGFCKHGPLCRHRH 166
>gi|429858684|gb|ELA33497.1| zinc finger ccch type domain containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 257
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK----------ACCHFARNSCMKGDNCPFDHD 525
C +L G C G C H + P + + C H+ R C KG++C F H+
Sbjct: 43 CKPFLAGHCPLGASCPDRHASSPSSSNNNSGGGGGGPSLVCKHWLRGLCKKGESCEFLHE 102
Query: 526 --LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
L K P C F+ G+C+ G+ CL+ H + P+ + PP P
Sbjct: 103 YNLRKMPECNFFMRNGYCSNGEECLYLH-IDPQSKLPPCP 141
>gi|46108144|ref|XP_381130.1| hypothetical protein FG00954.1 [Gibberella zeae PH-1]
Length = 411
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK------STKACCHFARNSCMKGDNCPFDHD--LS 527
C + G C G +C H + T ++ C H+ R C KG++C F H+ L
Sbjct: 199 CKAFQSGHCPNGTRCPERHVSDSKTSQPTGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLR 258
Query: 528 KYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
K P C F+ G+C+ GD CL+ H + P+ + PP P
Sbjct: 259 KMPECNFFMRNGYCSNGDECLYLH-IDPQSRLPPCP 293
>gi|294892295|ref|XP_002773992.1| hypothetical protein Pmar_PMAR011857 [Perkinsus marinus ATCC 50983]
gi|239879196|gb|EER05808.1| hypothetical protein Pmar_PMAR011857 [Perkinsus marinus ATCC 50983]
Length = 274
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCH-FARNSCMKGDNCPFDH 524
CH Y +GRC+ GD CKFSH + K CH F + C GD C F H
Sbjct: 30 CHFYARGRCRNGDTCKFSH--AEEVVAAKPVCHFFVKGECKNGDTCRFLH 77
Score = 45.8 bits (107), Expect = 0.12, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 505 ACCHFARNSCMKGDNCPFDHD---LSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQ-DPP 560
AC +AR C GD C F H ++ P +F KG C GD C F H+ +E D P
Sbjct: 29 ACHFYARGRCRNGDTCKFSHAEEVVAAKPVCHFFVKGECKNGDTCRFLHQQQEEETIDSP 88
>gi|195996743|ref|XP_002108240.1| hypothetical protein TRIADDRAFT_52522 [Trichoplax adhaerens]
gi|190589016|gb|EDV29038.1| hypothetical protein TRIADDRAFT_52522 [Trichoplax adhaerens]
Length = 602
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 481 KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS--KYPCENFVAKG 538
KG+C G++C + HD + C F R C ++CPF H +S K P +F +G
Sbjct: 383 KGKCNRGNECPYVHDPSKVA----VCTRFLRGMCH-AEDCPFSHQISTDKMPVCSFFLRG 437
Query: 539 FCNRGDNCLFSH 550
C + DNC FSH
Sbjct: 438 NCTK-DNCPFSH 448
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 43/111 (38%), Gaps = 37/111 (33%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSH----DTVPLTKSTKACCHFARNSCMKGDNCPFDH- 524
P V C +L+G C D C FSH D +P+ C F R +C K DNCPF H
Sbjct: 398 PSKVAVCTRFLRGMCHAED-CPFSHQISTDKMPV------CSFFLRGNCTK-DNCPFSHV 449
Query: 525 ------DLSK------------------YPCENFVAKGFCNRGDNCLFSHK 551
DL K C + G C++G NC H+
Sbjct: 450 RVAKNADLCKSFLLGYCPDGVKCKMRHVIICPEYSRNGQCSKGQNCRLLHR 500
>gi|358366860|dbj|GAA83480.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Aspergillus kawachii IFO 4308]
Length = 254
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP-LTKSTKA--------------CCHFARNSCMKG 517
V C Y +G C G C H T +T ST C HF + C KG
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKG 103
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 104 LKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCEH 151
Score = 49.7 bits (117), Expect = 0.008, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLSKY---PC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 92 CKHFLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPC 149
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ +GFC G C H
Sbjct: 150 EHY-DRGFCELGPLCAKRH 167
>gi|170046237|ref|XP_001850680.1| cleavage and polyadenylation specificity factor subunit 4 [Culex
quinquefasciatus]
gi|167869066|gb|EDS32449.1| cleavage and polyadenylation specificity factor subunit 4 [Culex
quinquefasciatus]
Length = 291
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 52/124 (41%), Gaps = 37/124 (29%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------STKACCH 508
C H+L+ C++GD+C+F H+ +TK K C
Sbjct: 71 CKHWLRALCKKGDQCEFLHE-YDMTKMPECYFYSRFNACHNKECPFLHIDPESKIKDCPW 129
Query: 509 FARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLPP----KEQDPPT 561
+ R C G NC H + + C NF GFC G +C F H +LPP K+Q P
Sbjct: 130 YDRGFCRHGPNCRHRH-VRRVLC-NFYLAGFCPDGPSCKFMHPRFELPPPPETKDQMPKR 187
Query: 562 PSTC 565
P TC
Sbjct: 188 PPTC 191
>gi|301120666|ref|XP_002908060.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103091|gb|EEY61143.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 596
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKY 529
C HYL+G C+ D C F HDT +T C + R +C++ D+C F HD Y
Sbjct: 251 CRHYLQGECRRAD-CMFLHDTDAIT-----CRFWLRGTCLQADHCVFAHDFCDY 298
>gi|303323107|ref|XP_003071545.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111247|gb|EER29400.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320033369|gb|EFW15317.1| mRNA 3'-end-processing protein yth1 [Coccidioides posadasii str.
Silveira]
Length = 251
Score = 52.8 bits (125), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH---DLSKYPC 531
C HYLKG C++G KC++ H+ + C FAR+ C GD+C + H + PC
Sbjct: 89 CKHYLKGLCKKGIKCEYLHEYN--LRRMPECQAFARSGYCANGDDCLYQHVSEEAKLPPC 146
Query: 532 ENFVAKGFCNRGDNCLFSH---KLPPKEQDP--PTPSTCTPELKPSPPLYASNLLKP 583
E++ KGFC G C H K+ P P CT P P NL KP
Sbjct: 147 EHY-DKGFCPLGPLCAKKHVRRKICPFYLAGFCPEGRVCTTGAHPRWP---ENLPKP 199
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 473 VKYCHHYLKGRCQEGDKC--------KFSHDTVPL-----TKSTKACCHFARNSCMKGDN 519
V C Y +G C G C + S T P T + C H+ + C KG
Sbjct: 43 VPVCKAYREGHCPLGPMCPDRHPTPSRISTATSPAIAPSSTHGSLVCKHYLKGLCKKGIK 102
Query: 520 CPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C+ F G+C GD+CL+ H KLPP E
Sbjct: 103 CEYLHEYNLRRMPECQAFARSGYCANGDDCLYQHVSEEAKLPPCEH 148
>gi|225710568|gb|ACO11130.1| Zinc finger CCCH domain-containing protein 15 homolog [Caligus
rogercresseyi]
Length = 385
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 30/149 (20%)
Query: 434 LSKEKKAKKKQKERKKRAEKNRQLGVRRL---KLPQNLKPKTVKYCHHYLKGRCQEGDKC 490
L KE+ +KK+KE KR E+ ++ R + K+ + PK+V +C + +G C++G+KC
Sbjct: 61 LEKERLDEKKRKEEAKRIEEEQKALYRPVTTQKVDAGVDPKSV-FCAFFKQGLCKKGEKC 119
Query: 491 KFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP----------------CENF 534
KFSHD KS K + + +D D+ Y C+ F
Sbjct: 120 KFSHDPSVENKSAKKSIYSDGKEEEEKGMEDWDEDMLAYVVNKKHSAEASNKTAIICKYF 179
Query: 535 V------AKGF---C-NRGDNCLFSHKLP 553
+ G+ C N G +C++ H LP
Sbjct: 180 LDALENNKYGWFWACPNNGKDCIYKHALP 208
>gi|294952825|ref|XP_002787468.1| hypothetical protein Pmar_PMAR015824 [Perkinsus marinus ATCC 50983]
gi|239902470|gb|EER19264.1| hypothetical protein Pmar_PMAR015824 [Perkinsus marinus ATCC 50983]
Length = 598
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-----VPLTKSTKACCHFARNSCMKGDNCPFDH--- 524
+ C YL+G+C+ G KC F+H+ P + T C +A+ C GD+C + H
Sbjct: 207 TRVCKLYLEGKCRYGKKCYFAHNADELREPPNLRKTTLCRLYAQGKCTLGDDCKYAHGPK 266
Query: 525 ------DLSKYPCENFVAKGFCNRGDNCLFSH 550
+ K N+ +G C G C F+H
Sbjct: 267 ELRATEGVYKSVVCNWWKQGHCQYGSRCRFAH 298
>gi|402469166|gb|EJW04214.1| hypothetical protein EDEG_01495 [Edhazardia aedis USNM 41457]
Length = 746
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 498 PLTKS--TKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
P KS T+ C F +C KGD C + H+L+++PC+ + K C R NC FSH
Sbjct: 654 PYAKSYRTQLCKFFLNKTCTKGDECTYSHNLAQFPCKAYFVKKNCTRP-NCQFSH 707
>gi|294938800|ref|XP_002782205.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239893703|gb|EER14000.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 354
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 17/94 (18%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHD-----TVPLTKSTKACCHFARNSC-MKGDNCPFDH-- 524
K C H+L+G C GDKC ++HD P + T+ C C + ++C F H
Sbjct: 79 TKLCKHFLRGCCLYGDKCTYAHDYSQIQVRPDLRKTRMCQANLEGRCPYRAEDCQFAHST 138
Query: 525 -DLSKYP-------CENFVAKGFCNRGDNCLFSH 550
DL P C ++ KG C+ GD C F+H
Sbjct: 139 EDLKATPGLFKTVLC-SWWQKGKCDMGDKCRFAH 171
>gi|443924052|gb|ELU43129.1| no arches protein [Rhizoctonia solani AG-1 IA]
Length = 287
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 22/117 (18%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN-SCMKGDNCPFDHDLS-KYPCEN 533
C H+L+G C++GD C+F H+ + C FAR+ +C GD C + H K C +
Sbjct: 96 CKHWLRGLCKKGDGCEFLHEYN--LRRMPECWWFARHGTCTAGDECLYAHPKERKIECPD 153
Query: 534 FVAKGFCNRG------DNCLFSHKL----------PPKEQDPPTPSTCTPELKPSPP 574
+ +GFC G C S L PP+ PP+P + +L P PP
Sbjct: 154 Y-QRGFCKTGLSSKTCQACCVSVILKRIFPKPGIPPPEAYRPPSPPS-QRDLGPPPP 208
>gi|169766720|ref|XP_001817831.1| mRNA 3'-end-processing protein yth1 [Aspergillus oryzae RIB40]
gi|238483485|ref|XP_002372981.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Aspergillus flavus NRRL3357]
gi|110283026|sp|Q2URI6.1|YTH1_ASPOR RecName: Full=mRNA 3'-end-processing protein yth1
gi|83765686|dbj|BAE55829.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701031|gb|EED57369.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Aspergillus flavus NRRL3357]
Length = 255
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP-LTKSTKA--------------CCHFARNSCMKG 517
V C Y +G C G C H T +T ST C HF + C KG
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKG 103
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 104 LKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCEH 151
Score = 48.5 bits (114), Expect = 0.014, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLSKY---PC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 92 CKHFLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPC 149
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ +GFC G C H
Sbjct: 150 EHY-DRGFCPLGPLCAKRH 167
>gi|391870897|gb|EIT80066.1| polyadenylation factor I complex, subunit, Yth1 [Aspergillus oryzae
3.042]
Length = 255
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP-LTKSTKA--------------CCHFARNSCMKG 517
V C Y +G C G C H T +T ST C HF + C KG
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKG 103
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 104 LKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCEH 151
Score = 48.5 bits (114), Expect = 0.014, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLSKY---PC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 92 CKHFLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPC 149
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ +GFC G C H
Sbjct: 150 EHY-DRGFCPLGPLCAKRH 167
>gi|317026097|ref|XP_001388960.2| mRNA 3'-end-processing protein yth1 [Aspergillus niger CBS 513.88]
Length = 255
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP-LTKSTKA--------------CCHFARNSCMKG 517
V C Y +G C G C H T +T ST C HF + C KG
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKG 103
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 104 LKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCEH 151
Score = 49.3 bits (116), Expect = 0.009, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLSKY---PC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 92 CKHFLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPC 149
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ +GFC G C H
Sbjct: 150 EHY-DRGFCELGPLCAKRH 167
>gi|115387235|ref|XP_001211123.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195207|gb|EAU36907.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 259
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP-LTKSTKA--------------CCHFARNSCMKG 517
V C Y +G C G C H T +T ST C HF + C KG
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKG 103
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 104 LKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCEH 151
Score = 48.5 bits (114), Expect = 0.014, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLSKY---PC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 92 CKHFLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPC 149
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ +GFC G C H
Sbjct: 150 EHY-DRGFCPLGPLCAKRH 167
>gi|321469733|gb|EFX80712.1| hypothetical protein DAPPUDRAFT_51128 [Daphnia pulex]
Length = 242
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + T C + KG+CQ C + H T C H+ R C
Sbjct: 21 QQLGAQNLPFP-GMDKSTAMVCTLFTKGQCQRASFCPYRHLR---ADRTIVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F A+ C F H P K +D P
Sbjct: 77 KKGDQCEFLHEFDMAKMPECYFYARFSACHNKECPFLHIDPETKIKDCP 125
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 33/135 (24%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH- 524
++L+ C H+L+G C++GD+C+F H+ + K + C +AR S CPF H
Sbjct: 58 RHLRADRTIVCKHWLRGLCKKGDQCEFLHE-FDMAKMPE-CYFYARFSACHNKECPFLHI 115
Query: 525 --------------------------DLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQD 558
+ + C N+ A GFC G C F H P+ +
Sbjct: 116 DPETKIKDCPWYDRGFCRHGPTCRHRHVRRVLCMNYTA-GFCPDGPECKFVH---PRFEL 171
Query: 559 PPTPSTCTPELKPSP 573
PP P + + P
Sbjct: 172 PPLPDDIKGDKRKMP 186
>gi|21618936|gb|AAH32001.1| ZC3H8 protein [Homo sapiens]
gi|312153288|gb|ADQ33156.1| zinc finger CCCH-type containing 8 [synthetic construct]
Length = 297
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
K + C +F C+KGD C FDHD K C+ F +G+C RG+NCL+ H P
Sbjct: 192 KGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK-FYVQGYCTRGENCLYLHNEYP 248
>gi|449299260|gb|EMC95274.1| hypothetical protein BAUCODRAFT_42995, partial [Baudoinia
compniacensis UAMH 10762]
Length = 133
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA---CCHFARNSCMKGDNCPFDHDLS---KY 529
C Y G C G C H P +S + C H+ R C KGD C F H + +
Sbjct: 4 CPDYKTGTCPRGPLCPNRHYIPPSERSGISNLICKHYQRGLCKKGDACEFAHTFNLRDER 63
Query: 530 PCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
C+ F G C +G++C + H +PP +
Sbjct: 64 ECKEFSRYGICPQGEDCTYLH-IPPTSR 90
Score = 48.9 bits (115), Expect = 0.013, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH-----DLSKY 529
C HY +G C++GD C+F+H T L + + C F+R C +G++C + H L
Sbjct: 37 CKHYQRGLCKKGDACEFAH-TFNL-RDERECKEFSRYGICPQGEDCTYLHIPPTSRLRDA 94
Query: 530 PCENFVAKGFCNRGDNCLFSH 550
C ++ +GFC G C H
Sbjct: 95 ACPHY-TRGFCPLGPYCRLRH 114
Score = 41.6 bits (96), Expect = 2.0, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 482 GRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGF 539
G C +G+ C + H +P T + AC H+ R C G C H + PC ++A GF
Sbjct: 72 GICPQGEDCTYLH--IPPTSRLRDAACPHYTRGFCPLGPYCRLRHIKHRVPCPYYLA-GF 128
Query: 540 CNRG 543
C G
Sbjct: 129 CPNG 132
>gi|417398298|gb|JAA46182.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 279
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 44.7 bits (104), Expect = 0.22, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|440802647|gb|ELR23576.1| CCCHtype Zn finger-containing protein [Acanthamoeba castellanii
str. Neff]
Length = 284
Score = 52.8 bits (125), Expect = 9e-04, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 464 LPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
P +P + C Y+KG C G C F H + + C H+ R C KG++C +
Sbjct: 34 FPDLNRPSPSEPCKFYMKGNCVLGQTCPFRH----VYGDKEVCKHWLRGLCKKGESCEYL 89
Query: 524 HD--LSKYP-CENFVAKGFC-NRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASN 579
H+ L K P C F G C N C+F H + P+E+ P K P +
Sbjct: 90 HEYRLDKMPICYFFSKFGECSNPSGECMFRH-VSPEEKMRECPWYARGFCKHGPRCRHKH 148
Query: 580 LLKPL 584
+ KPL
Sbjct: 149 VRKPL 153
Score = 40.8 bits (94), Expect = 3.0, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 49/129 (37%), Gaps = 41/129 (31%)
Query: 476 CHHYLKGRCQEGDKCKFSH----DTVPL------------------------TKSTKACC 507
C H+L+G C++G+ C++ H D +P+ + + C
Sbjct: 72 CKHWLRGLCKKGESCEYLHEYRLDKMPICYFFSKFGECSNPSGECMFRHVSPEEKMRECP 131
Query: 508 HFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLPPKEQDPP---- 560
+AR C G C H + K CE ++ GFC G C H +LP D P
Sbjct: 132 WYARGFCKHGPRCRHKH-VRKPLCEAYMI-GFCPDGPLCKLGHPKYELPRLSGDDPNSQR 189
Query: 561 ----TPSTC 565
TP C
Sbjct: 190 LRTRTPVVC 198
>gi|405122367|gb|AFR97134.1| CCCH zinc finger protein [Cryptococcus neoformans var. grubii H99]
Length = 478
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 462 LKLPQNLKPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
L LP++ P+ + C ++ K GRC++G CK HD AC +F R C G C
Sbjct: 232 LTLPKSNVPRKGQLCPYFSKTGRCRKGHICKAIHD----PDRVAACPNFLRGRCELGPIC 287
Query: 521 PFDHDLSKY---PCENFVAKGFCNRGDNCLFSH 550
P H+ + + C F A +C R NC + H
Sbjct: 288 PLSHNPTAHNTPSCTRFQALSYCTR-PNCPYPH 319
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 29/110 (26%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH----- 524
P V C ++L+GRC+ G C SH+ P +T +C F S NCP+ H
Sbjct: 267 PDRVAACPNFLRGRCELGPICPLSHN--PTAHNTPSCTRFQALSYCTRPNCPYPHVKVSN 324
Query: 525 ----------------------DLSKYPCENFVAKGFCNRGDNCLFSHKL 552
+L Y C F + G C RG C H L
Sbjct: 325 DAPICEDFAFTGWCDTAEGECPNLHSYDCPEFWSTGKCPRGAKCKLRHTL 374
>gi|294925662|ref|XP_002778975.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
gi|239887821|gb|EER10770.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
Length = 424
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-----VPLTKSTKACCHFARNSCMKGDNCPFDH--- 524
+ C +L+G+C+ G C ++HD P + TK C + + C G +C + H
Sbjct: 74 TRMCKFFLRGQCKHGSDCGYAHDWSELRQAPDLRKTKMCQLYRKGQCPNGADCAYAHSRD 133
Query: 525 ------DLSKYPCENFVAKGFCNRGDNCLFSH 550
D+ K F G CN G C +H
Sbjct: 134 ELRATADVYKTSLCRFWMNGSCNAGSKCRHAH 165
>gi|403420376|emb|CCM07076.1| predicted protein [Fibroporia radiculosa]
Length = 743
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 470 PKTVKYCHHYLKGRCQE-GDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P + C ++L G C + C SHD P + T C HFA N ++CPF H
Sbjct: 118 PSKIAICWNFLHGNCSNTAESCGLSHDPTP--ERTPPCLHFANNGRCTREDCPFPHVRLG 175
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C +F G+C +G +C H
Sbjct: 176 QRQGVCRDFAVFGYCGKGLDCERQH 200
>gi|294891186|ref|XP_002773463.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
gi|239878616|gb|EER05279.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
Length = 423
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-----VPLTKSTKACCHFARNSCMKGDNCPFDH--- 524
+ C +L+G+C+ G C ++HD P + TK C + + C G +C + H
Sbjct: 73 TRMCKFFLRGQCKHGSDCGYAHDWSELRQAPDLRKTKMCQLYRKGQCPNGADCAYAHSRD 132
Query: 525 ------DLSKYPCENFVAKGFCNRGDNCLFSH 550
D+ K F G CN G C +H
Sbjct: 133 ELRATADVYKTSLCRFWMNGSCNAGSKCRHAH 164
>gi|189189038|ref|XP_001930858.1| zinc finger containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972464|gb|EDU39963.1| zinc finger containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 339
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 77/184 (41%), Gaps = 43/184 (23%)
Query: 409 VTQEQGITTKDKLDSGACNKRKRSALSKEKKAKKK---QKERKKRAEKNRQLGVRRLKLP 465
Q+Q K SG KR A K ++ K+K ++ RK+ AE + + V+ K+P
Sbjct: 30 AAQKQIAQIKATAASGGSPDEKRKAAEKLQREKEKLAAEQARKETAELFKPVQVQ--KVP 87
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCH-----------FARNSC 514
PKTV C + KG C++G KCKFSHD K+ K + R
Sbjct: 88 FGTDPKTV-LCQFFKKGNCEKGKKCKFSHDLAIERKTEKRSLYTDSRDKEKEEEEERRKK 146
Query: 515 MKGDNCPFDHD------LSKY---------PCENFVAK---------GFCNRGDNCLFSH 550
DN +D D LSK+ C+ F+A C GD C++ H
Sbjct: 147 DNMDN--WDEDKLRQVVLSKHGNPKTTTDKVCKYFIAAIEDQKYGWFWICPNGDKCMYKH 204
Query: 551 KLPP 554
LPP
Sbjct: 205 SLPP 208
>gi|119597069|gb|EAW76663.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_b [Homo sapiens]
Length = 255
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 44.7 bits (104), Expect = 0.26, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|429857498|gb|ELA32362.1| ccch zinc finger protein [Colletotrichum gloeosporioides Nara gc5]
Length = 432
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query: 436 KEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKT-----------------VKYCHH 478
K ++K+ R +R GV+++ +P ++ T V C
Sbjct: 219 KFHRSKRGNLYRAGVLRAHRHHGVKKVDVPCSMFSLTGSCAKGPACRYQHDASKVAVCRE 278
Query: 479 YL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP----CEN 533
L KG C + C SHD P + T C HF + +C NCP+ H S P C +
Sbjct: 279 LLHKGTCAHEESCDLSHDLTP--QRTPTCVHFIKGNCAN-PNCPYAHS-SVSPGALVCRS 334
Query: 534 FVAKGFCNRGDNC 546
F G+C++GDNC
Sbjct: 335 FGMYGYCDKGDNC 347
>gi|412989291|emb|CCO15882.1| predicted protein [Bathycoccus prasinos]
Length = 218
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 465 PQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
P+ K C H+L+ C +GDKC F H + C +FA+ K +CP+ H
Sbjct: 34 PRAQKNYRQTVCRHWLRNLCMKGDKCGFLHQFD--KERMPTCRYFAKYGECKEPDCPYKH 91
Query: 525 DLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
N GFC G NC + H P PP
Sbjct: 92 SNDDVKECNMYKLGFCIHGPNCRYKHIRLPGPAPPP 127
>gi|403418466|emb|CCM05166.1| predicted protein [Fibroporia radiculosa]
Length = 281
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 34/132 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSHD--------------------------TVPLTKSTKACCHF 509
C H+L+G C++GD C+F H+ P + + C +
Sbjct: 99 CKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLYAHPKERRIE-CPDY 157
Query: 510 ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLP----PKEQDPPTPSTC 565
R C G CP H + + C+ ++ GFC G +C H P P+ +PP P
Sbjct: 158 NRGFCQLGPTCPRKH-VRRVACQLYLT-GFCPMGPDCARGHPKPGVPLPEAYEPP-PQPS 214
Query: 566 TPELKPSPPLYA 577
+L P PP Y
Sbjct: 215 IRDLGPPPPGYG 226
>gi|350638104|gb|EHA26460.1| hypothetical protein ASPNIDRAFT_170141 [Aspergillus niger ATCC
1015]
Length = 206
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP-LTKSTKA--------------CCHFARNSCMKG 517
V C Y +G C G C H T +T ST C HF + C KG
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKG 103
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 104 LKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCEH 151
Score = 49.3 bits (116), Expect = 0.011, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLSKY---PC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 92 CKHFLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPC 149
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ +GFC G C H
Sbjct: 150 EHY-DRGFCELGPLCAKRH 167
>gi|403365658|gb|EJY82617.1| Zinc finger, CCCH type domain-containing protein [Oxytricha
trifallax]
Length = 914
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 502 STKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKL 552
S C + N+C +G +C F H ++PC+ GFC +G C F H+L
Sbjct: 280 SQSLCKYVLTNTCHRGADCNFSHATIEFPCKYLHGTGFCEKGQQCKFGHRL 330
>gi|198430431|ref|XP_002129809.1| PREDICTED: similar to Cleavage and polyadenylation specificity
factor subunit 4 (Cleavage and polyadenylation
specificity factor 30 kDa subunit) (CPSF 30 kDa subunit)
(NS1 effector domain-binding protein 1) (Neb-1) (No
arches homolog) [Ciona intestinalis]
Length = 286
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 454 NRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS 513
++QLGV+ L + CH + CQ G C F H L C H+ R
Sbjct: 20 DQQLGVQPLPF-TGMDKSGAPVCHFFKLSICQRGANCPFRH---VLGDKAIVCKHWLRGL 75
Query: 514 CMKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
C KGD C F H D+SK P C + G C+ D C + H P K +D P
Sbjct: 76 CKKGDQCEFLHEYDMSKMPECYFYARFGRCDNKD-CQYQHIDPASKIKDCP 125
Score = 47.0 bits (110), Expect = 0.050, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 31/111 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSHDT--------------------------VPLTKSTKACCHF 509
C H+L+G C++GD+C+F H+ + K C +
Sbjct: 68 CKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFGRCDNKDCQYQHIDPASKIKDCPWY 127
Query: 510 ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLPPKEQ 557
R C G C H K C N++ GFC G C F H +LP EQ
Sbjct: 128 DRGFCKHGATCKHRHR-RKIMCMNYLV-GFCPEGGKCKFVHPLWELPVSEQ 176
>gi|255071081|ref|XP_002507622.1| predicted protein [Micromonas sp. RCC299]
gi|226522897|gb|ACO68880.1| predicted protein [Micromonas sp. RCC299]
Length = 210
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 20/144 (13%)
Query: 427 NKRKRSALSKEKKAKKKQKERKK------RAEKNRQLGVRRLKLPQNLKPKTVKYCHHYL 480
+++KR ++ + K ++ K RA + L L PQ + C H+L
Sbjct: 4 SRQKRRPRCQQAQEKTTARQAAKLCSLTPRASQPTVLTTTTLHQPQTV-------CRHWL 56
Query: 481 KGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLSKYPCENFVAKGF 539
+G C +G+ C F H + C FA+ N C + D CPF H L N GF
Sbjct: 57 RGLCMKGNGCGFLHQFD--KRRMPTCRFFAKYNECREPD-CPFKHSLEDVKDCNMFKLGF 113
Query: 540 CNRGDNCLFSHKLPPKEQDPPTPS 563
C G C + H + PP P+
Sbjct: 114 CIHGKLCRYRHA---SLKAPPMPT 134
>gi|219114573|ref|XP_002176455.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402559|gb|EEC42552.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 334
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 23/105 (21%)
Query: 476 CHHYLKGRCQEGDKCKFSHD---------TVPLTKSTKACCHFARNSCMKGDNCPFDHD- 525
C ++ RC G+ CKF H V + C F + C GD CPF H+
Sbjct: 126 CFLWIHKRCPYGENCKFVHHGNGGVLDQRAVSAFPKPRKCWDFKKGKCKMGDTCPFSHEG 185
Query: 526 -------------LSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
S+ C N+ KG C +G+ C + H + +EQ
Sbjct: 186 IEPISIKEKIDRPSSEKDCINWKTKGKCRKGETCPYRHSVSLREQ 230
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTV-PLT--------KSTKACCHF-ARNSCMKGDNCPFDHD 525
C + KG+C+ GD C FSH+ + P++ S K C ++ + C KG+ CP+ H
Sbjct: 165 CWDFKKGKCKMGDTCPFSHEGIEPISIKEKIDRPSSEKDCINWKTKGKCRKGETCPYRHS 224
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
+S E +AK NR F P K P
Sbjct: 225 VSLR--EQAIAKLATNRPGESAFQTVAPGKRTSEP 257
>gi|294873840|ref|XP_002766763.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
gi|239867926|gb|EEQ99480.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
Length = 411
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-----VPLTKSTKACCHFARNSCMKGDNCPFDH--- 524
+ C +L+G+C+ G C ++HD P + TK C + + C G +C + H
Sbjct: 65 TRMCKFFLRGQCKHGSDCGYAHDWSELRQAPDLRKTKMCQLYRKGQCPNGADCAYAHSRD 124
Query: 525 ------DLSKYPCENFVAKGFCNRGDNCLFSH 550
D+ K F G CN G C +H
Sbjct: 125 ELRATADVYKTSLCRFWMNGSCNAGSKCRHAH 156
>gi|119497215|ref|XP_001265370.1| mRNA cleavage and polyadenylation specificity factor complex
subunit, putative [Neosartorya fischeri NRRL 181]
gi|119413532|gb|EAW23473.1| mRNA cleavage and polyadenylation specificity factor complex
subunit, putative [Neosartorya fischeri NRRL 181]
Length = 254
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP-LTKSTKA--------------CCHFARNSCMKG 517
V C Y +G C G C H T +T ST C HF + C KG
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKG 103
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKE 556
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 104 LKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLSKY---PC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 92 CKHFLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPC 149
Query: 532 ENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSP---PLYASNLLKPL 584
EN+ +GFC G C H + + C PE K P P ++ NL KP+
Sbjct: 150 ENY-DQGFCELGPLCAKRH-VRRRLCKYYLAGFC-PEGKACPDAHPHWSENLPKPM 202
>gi|432870757|ref|XP_004071833.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Oryzias latipes]
Length = 240
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P K + C ++KG C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFPGMDKSGSA-VCEFFMKGTCMKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 48.1 bits (113), Expect = 0.019, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 48/154 (31%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------ST 503
KTV C H+L+G C++GD+C+F H+ +TK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPESKI 121
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQDP 559
K C + R C G +C H + C N++ GFC G +C F H +LP + P
Sbjct: 122 KDCPWYDRGFCKHGPDCRHRHT-RRVICVNYLV-GFCPEGKSCKFMHPRFELPMGTSEQP 179
Query: 560 PTPSTCTPELKPSPPLYASNLLKPLNNNKVSHQN 593
P P + K N N +SHQN
Sbjct: 180 PLPQQIQNQGKN-------------NTNIISHQN 200
>gi|443684202|gb|ELT88206.1| hypothetical protein CAPTEDRAFT_70214, partial [Capitella teleta]
gi|443706759|gb|ELU02673.1| hypothetical protein CAPTEDRAFT_77329, partial [Capitella teleta]
Length = 109
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
K P PK V C +L+G C+ D C FSH V + C HF R +C + D+CP+
Sbjct: 22 KCPNTHDPKRVAVCTRFLRGTCKITD-CAFSH--VVAAEKMPTCEHFLRGACSR-DHCPY 77
Query: 523 DH---DLSKYPCENFVAKGFCNRGDNCLFSHKL 552
H + C F A GFC D C H L
Sbjct: 78 LHVKVSENAEVCPAF-AIGFCPLADKCKKKHIL 109
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 469 KPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS 527
+ ++KYC +Y + GRC G+KC +HD K C F R +C K +C F H ++
Sbjct: 1 RKSSLKYCIYYNRFGRCYRGNKCPNTHD----PKRVAVCTRFLRGTC-KITDCAFSHVVA 55
Query: 528 --KYP-CENFVAKGFCNRGDNCLFSH 550
K P CE+F+ +G C+R D+C + H
Sbjct: 56 AEKMPTCEHFL-RGACSR-DHCPYLH 79
>gi|298706277|emb|CBJ29302.1| zinc finger protein [Ectocarpus siliculosus]
Length = 598
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD 525
+ C YLKGRC +G+ C FSHD K C +F C +G C F HD
Sbjct: 303 RLCTFYLKGRCDKGEACTFSHDV-----ERKNCSYFMSGRCHRGKGCLFMHD 349
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
C + + C KG+ C F HD+ + C F++ G C+RG CLF H +E+
Sbjct: 305 CTFYLKGRCDKGEACTFSHDVERKNCSYFMS-GRCHRGKGCLFMHDHEAREK 355
>gi|156033111|ref|XP_001585392.1| hypothetical protein SS1G_13631 [Sclerotinia sclerotiorum 1980]
gi|154699034|gb|EDN98772.1| hypothetical protein SS1G_13631 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 829
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFA-RNSCMKGDNCPFDH---------D 525
C +YL GRC G KC H T P + C +F N+C G C + H D
Sbjct: 4 CVYYLVGRCLAGIKCHHKH-TGPAFPT--PCKNFVLHNTCTWGARCRYAHPTPVAAEDPD 60
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDP 559
S+ C+NF+++ C G CL H K+ DP
Sbjct: 61 PSRSSCKNFLSRRGCKFGSKCLNYHPGAVKKADP 94
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP--CENFVAKGFCNRGDNCLFSHKLPPKEQDP-PTP 562
C ++ C+ G C H +P C+NFV C G C ++H P +DP P+
Sbjct: 4 CVYYLVGRCLAGIKCHHKHTGPAFPTPCKNFVLHNTCTWGARCRYAHPTPVAAEDPDPSR 63
Query: 563 STC 565
S+C
Sbjct: 64 SSC 66
>gi|82541043|ref|XP_724793.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479562|gb|EAA16358.1| Zinc finger C-x8-C-x5-C-x3-H type, putative [Plasmodium yoelii
yoelii]
Length = 349
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
C ++ K G+C + C +SHD P+ K +K C + +C K +NC F HD + + C N
Sbjct: 74 CKYFFKKGKCLHNENCNYSHDVTPIYKISKLCKFLIKGNCHK-ENCMFSHDYNFFFCRNN 132
Query: 535 VAKGFCNRGDNCLFSH 550
+ C +C F H
Sbjct: 133 LINNSC-TNPSCKFKH 147
>gi|346975251|gb|EGY18703.1| translation machinery-associated protein [Verticillium dahliae
VdLs.17]
Length = 343
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 44/148 (29%)
Query: 436 KEKKAKKKQKERKKRA--EKNRQLG------VRRLKLPQNLKPKTVKYCHHYLKGRCQEG 487
K K+A+K Q+E++KRA E R+L + K+P + PKTV C + KG C++G
Sbjct: 54 KRKQAEKAQREKEKRAAEEAKRELADLVNKPAQIQKVPFGVDPKTV-VCIFFKKGNCEKG 112
Query: 488 DKCKFSH---------------------DTVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
KCKFSH D +++ C F + +G F
Sbjct: 113 KKCKFSHNVEDERKVNKKSLYTDTRAEEDEQKKVETSAGVCKFFVEAIEEGKYGWF---- 168
Query: 527 SKYPCENFVAKGFCNRGDNCLFSHKLPP 554
+ C N GD C++ H LPP
Sbjct: 169 --WVCP--------NGGDKCMYKHALPP 186
>gi|145343958|ref|XP_001416510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576735|gb|ABO94803.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 291
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS 527
K C +L+G C++G C F H++ P + C FAR C G CPF H+++
Sbjct: 114 KVCRFWLQGGCRKGSACDFKHESAP--NKDQKCRFFARGRCKAGARCPFKHEVT 165
>gi|390596590|gb|EIN05991.1| hypothetical protein PUNSTDRAFT_145382 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 374
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 470 PKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P + C +L+G C + + C SHD +P + T C HFA NCPF H
Sbjct: 179 PDKIAICWPFLQGNCAKTAETCALSHDPIP--QRTPLCVHFANAGRCTRTNCPFPHVRVG 236
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C +F G+C++G +C H
Sbjct: 237 PKQGVCRDFAVLGYCDKGLDCEHQH 261
>gi|74210010|dbj|BAE21298.1| unnamed protein product [Mus musculus]
gi|74218790|dbj|BAE37808.1| unnamed protein product [Mus musculus]
Length = 298
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKL 552
K + C +F C+KGD C FDHD K C+ +V +G+C +G+NCL+ H +
Sbjct: 206 KGKQVCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYV-QGYCTKGENCLYLHNI 260
>gi|358398723|gb|EHK48074.1| hypothetical protein TRIATDRAFT_290555 [Trichoderma atroviride IMI
206040]
Length = 431
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +LK G+C G+ C SH+ P + C HFA+ C + D CPF H
Sbjct: 269 PDKVALCKDFLKDGKCPNGESCDLSHELTP--ERVPNCLHFAKGQCSRPD-CPFTHSKAS 325
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
S C F G+C++G +C H
Sbjct: 326 PSAPVCAAFGFCGYCDKGADCTDRH 350
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 464 LPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPF 522
L L P+ V C H+ KG+C D C F+H + S C F C KG +C
Sbjct: 292 LSHELTPERVPNCLHFAKGQCSRPD-CPFTHSKA--SPSAPVCAAFGFCGYCDKGADCT- 347
Query: 523 DHDLSKYPCENFVAKGFC-NRGDNCLFSHK 551
D + C +F GFC RG C H+
Sbjct: 348 --DRHVFECPDFSNTGFCKTRG--CKLLHR 373
>gi|59891425|ref|NP_001012351.1| cleavage and polyadenylation specificity factor subunit 4 [Rattus
norvegicus]
gi|81882852|sp|Q5FVR7.1|CPSF4_RAT RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|58476448|gb|AAH89824.1| Cleavage and polyadenylation specific factor 4 [Rattus norvegicus]
gi|183229546|gb|ACC60271.1| cleavage and polyadenylation specific factor 4 isoform 1 [Mus
musculus]
Length = 243
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 44.3 bits (103), Expect = 0.33, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|27806837|ref|NP_776367.1| cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
gi|75057446|sp|O19137.1|CPSF4_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|2327052|gb|AAC48759.1| cleavage and polyadenylation specificity factor 30 kDa subunit [Bos
taurus]
gi|296472897|tpg|DAA15012.1| TPA: cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
Length = 243
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 44.3 bits (103), Expect = 0.33, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|395514830|ref|XP_003761615.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Sarcophilus harrisii]
Length = 244
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 44.3 bits (103), Expect = 0.34, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|344289702|ref|XP_003416580.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Loxodonta africana]
Length = 244
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 44.3 bits (103), Expect = 0.34, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|302695329|ref|XP_003037343.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
gi|300111040|gb|EFJ02441.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
Length = 287
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 37/133 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSHD--------------------------TVPLTKSTKACCHF 509
C H+L+G C++GD C+F H+ P + + C +
Sbjct: 95 CKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLYAHPKERKVE-CPDY 153
Query: 510 ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHK---LPPKE--QDPPTPST 564
R C G +CP H + + C+ ++ GFC G +C H LPP E + PP P+
Sbjct: 154 KRGFCKLGPSCPRKH-IRRIACQLYLT-GFCPMGPDCPRGHPKPGLPPPEAYELPPPPAR 211
Query: 565 CTPELKPSPPLYA 577
+L P PP Y
Sbjct: 212 ---DLGPPPPGYG 221
>gi|171695376|ref|XP_001912612.1| hypothetical protein [Podospora anserina S mat+]
gi|170947930|emb|CAP60094.1| unnamed protein product [Podospora anserina S mat+]
Length = 235
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
C H+ R C KG C F H+ L K P C FV G+C+ GD CL+ H + P + PP P
Sbjct: 65 CKHWLRGLCKKGLTCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLH-IDPSSKLPPCP 123
>gi|149755352|ref|XP_001494983.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Equus caballus]
gi|301777648|ref|XP_002924238.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Ailuropoda melanoleuca]
gi|348568556|ref|XP_003470064.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Cavia porcellus]
gi|354495217|ref|XP_003509727.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Cricetulus griseus]
gi|410984389|ref|XP_003998511.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Felis catus]
gi|183229548|gb|ACC60272.1| cleavage and polyadenylation specific factor 4 isoform 2 [Mus
musculus]
Length = 244
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 44.3 bits (103), Expect = 0.34, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|29792109|gb|AAH50738.1| CPSF4 protein [Homo sapiens]
gi|119597071|gb|EAW76665.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_d [Homo sapiens]
gi|312153176|gb|ADQ33100.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
Length = 243
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 44.3 bits (103), Expect = 0.34, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|395852820|ref|XP_003798928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Otolemur garnettii]
Length = 244
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 44.3 bits (103), Expect = 0.34, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|332867112|ref|XP_001137776.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 6 [Pan troglodytes]
gi|397489492|ref|XP_003815760.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Pan paniscus]
gi|410214166|gb|JAA04302.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249440|gb|JAA12687.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289412|gb|JAA23306.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353007|gb|JAA43107.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 244
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 44.3 bits (103), Expect = 0.34, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|340521957|gb|EGR52190.1| predicted protein [Trichoderma reesei QM6a]
Length = 410
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C ++K G+C G+ C SH+ P + C H+A+ C + D CPF H
Sbjct: 244 PNKVALCKDFMKDGKCPNGEACDLSHELTP--ERVPNCLHYAKGQCSRPD-CPFTHSKAS 300
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
S CE F G+C++G C H
Sbjct: 301 PSAPVCEAFGFCGYCDKGAECTNRH 325
>gi|73957938|ref|XP_860761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Canis lupus familiaris]
Length = 244
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 43.9 bits (102), Expect = 0.35, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|417397723|gb|JAA45895.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 243
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 43.9 bits (102), Expect = 0.35, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|335284056|ref|XP_003354505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Sus scrofa]
Length = 244
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 40.8 bits (94), Expect = 3.3, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 29/106 (27%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK-------------STKACCHFARNSCMKG 517
KTV C H+L+G C++GD+C+F H+ +TK S K C + K
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPESKI 121
Query: 518 DNCP-FDHDLSKYP------------CENFVAKGFCNRGDNCLFSH 550
+CP +D K+ C N++ GFC G +C F H
Sbjct: 122 KDCPWYDARFCKHGPLCRHRHTRRVICVNYLV-GFCPEGPSCKFMH 166
>gi|125987603|ref|NP_001075028.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Homo sapiens]
gi|383872422|ref|NP_001244547.1| cleavage and polyadenylation specificity factor subunit 4 [Macaca
mulatta]
gi|332258048|ref|XP_003278115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Nomascus leucogenys]
gi|402862922|ref|XP_003895787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Papio anubis]
gi|403285963|ref|XP_003934278.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Saimiri boliviensis boliviensis]
gi|426357074|ref|XP_004045873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Gorilla gorilla gorilla]
gi|13111867|gb|AAH03101.1| Cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597070|gb|EAW76664.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_c [Homo sapiens]
gi|380809014|gb|AFE76382.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|383413435|gb|AFH29931.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|384940112|gb|AFI33661.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
Length = 244
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 43.9 bits (102), Expect = 0.35, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|291411293|ref|XP_002721910.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Oryctolagus cuniculus]
Length = 244
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 43.9 bits (102), Expect = 0.36, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|327288274|ref|XP_003228853.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Anolis carolinensis]
Length = 278
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCDFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P C + G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKYGECSNKE-CPFLHIDPESKIKDCP 125
>gi|62857541|ref|NP_001016803.1| cleavage and polyadenylation specific factor 4-like [Xenopus
(Silurana) tropicalis]
gi|89273947|emb|CAJ82303.1| novel protein similar to cpsf4 [Xenopus (Silurana) tropicalis]
Length = 269
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 462 LKLP-QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
L LP Q + C Y+KG C++G C F H + T C H+ R C KGD C
Sbjct: 26 LLLPFQGMDKSGAAVCDFYVKGICRKGSTCPFRHLN---GEKTVVCKHWLRGLCKKGDQC 82
Query: 521 PFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
F H D+ + P F +K G C+ D C F H P K +D P
Sbjct: 83 EFLHEYDMGRMPECYFYSKFGECSNKD-CPFLHIDPASKVKDCP 125
Score = 43.1 bits (100), Expect = 0.60, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ C +++ +CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHEYD--MGRMPECYFYSKFGECSNKDCPFLHIDPASK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 VKDCPWYDRGFCKHGPACKHRH 142
>gi|70990364|ref|XP_750031.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Aspergillus fumigatus Af293]
gi|74669991|sp|Q4WKD9.1|YTH1_ASPFU RecName: Full=mRNA 3'-end-processing protein yth1
gi|66847663|gb|EAL87993.1| mRNA cleavage and polyadenylation specificity factor complex
subunit, putative [Aspergillus fumigatus Af293]
gi|159130509|gb|EDP55622.1| mRNA cleavage and polyadenylation specificity factor complex
subunit, putative [Aspergillus fumigatus A1163]
Length = 254
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP-LTKSTKA--------------CCHFARNSCMKG 517
V C Y +G C G C H T +T ST C HF + C KG
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKG 103
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKE 556
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 104 LKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLSKY---PC 531
C H+LKG C++G KC++ H+ + C F+R+ C GD+C + H + PC
Sbjct: 92 CKHFLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPC 149
Query: 532 ENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSP---PLYASNLLKP 583
EN+ +GFC G C S + + + PE K P P ++ NL KP
Sbjct: 150 ENY-DQGFCELGPLC--SKRHVRRRLCKYYLAGFCPEGKACPDAHPRWSENLPKP 201
>gi|294898600|ref|XP_002776295.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239883205|gb|EER08111.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 332
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 24/155 (15%)
Query: 421 LDSGACNKRKRSALSKEKKAKKKQKERKKRAE----KNRQLGVRRLKLPQNLKPKTVKYC 476
L+S + +RSA + + K R N++L R + L ++L K C
Sbjct: 18 LNSPSATLMRRSATEPSSRPSRAHGSNKGRGRVGGSDNKKL--RPVDLSKHLL--KTKVC 73
Query: 477 HHYLKGRCQEGDKCKFSHDTV-----PLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPC 531
YL+GRC G KC F+H T P K T C + + C KG C + H ++
Sbjct: 74 SLYLEGRCHYGSKCFFAHSTSELQQQPNLKKTSLCRLYRQGKCNKGAACTYAHSAAELRA 133
Query: 532 EN------FVAKGFCNRGDNCLFSH-----KLPPK 555
+ G C+ G C F+H + PPK
Sbjct: 134 TEKTVMCIWWLSGHCSHGSKCRFAHGEAELRSPPK 168
>gi|58271608|ref|XP_572960.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134114766|ref|XP_773681.1| hypothetical protein CNBH1360 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256309|gb|EAL19034.1| hypothetical protein CNBH1360 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229219|gb|AAW45653.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 483
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 462 LKLPQNLKPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
L LP++ P+ + C ++ K GRC++G CK HD AC +F R C G C
Sbjct: 232 LTLPKSNVPRRGQLCPYFSKTGRCRKGHICKAIHD----PDRVAACPNFLRGRCELGPIC 287
Query: 521 PFDHDLSKY---PCENFVAKGFCNRGDNCLFSH 550
P H + + C F A +C R NC + H
Sbjct: 288 PLSHRTTAHNTPSCTRFQALSYCTR-PNCPYPH 319
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 40/110 (36%), Gaps = 29/110 (26%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH----- 524
P V C ++L+GRC+ G C SH T +T +C F S NCP+ H
Sbjct: 267 PDRVAACPNFLRGRCELGPICPLSHRTT--AHNTPSCTRFQALSYCTRPNCPYPHVKVSN 324
Query: 525 ----------------------DLSKYPCENFVAKGFCNRGDNCLFSHKL 552
+L Y C F + G C RG C H L
Sbjct: 325 DAPICEDFAFTGWCDTAEGECPNLHSYDCPEFWSTGKCPRGAKCKLRHTL 374
>gi|89266751|emb|CAJ83570.1| novel protein similar to cpsf4 [Xenopus (Silurana) tropicalis]
Length = 279
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKSACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
>gi|294878940|ref|XP_002768519.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239871084|gb|EER01237.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 408
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 17/94 (18%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHD-----TVPLTKSTKACCHFARNSC-MKGDNCPFDH-- 524
K C H+L+G C GDKC ++HD P + TK C C + + C F H
Sbjct: 108 TKLCKHFLRGCCLYGDKCTYAHDYSQIQVRPDLRKTKMCQANLEGRCPYRAEECQFAHST 167
Query: 525 -DLSKYP-------CENFVAKGFCNRGDNCLFSH 550
DL P C ++ KG C+ GD C F+H
Sbjct: 168 EDLKATPGLFKTVLC-SWWQKGKCDMGDKCRFAH 200
>gi|409081350|gb|EKM81709.1| hypothetical protein AGABI1DRAFT_111973 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 250
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 460 RRLKLPQNLKPKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFA-RNSCMKG 517
R L P PK V C +++G C D C SHD P + T C HF R C K
Sbjct: 52 RGLTCPYEHDPKKVAICWKFMQGDCPHNADSCNLSHDPTP--ERTPLCVHFLNRGRCTK- 108
Query: 518 DNCPFDH-DLSKYP--CENFVAKGFCNRGDNCLFSH 550
+ CPF H ++ K C++F G+C RG +C +H
Sbjct: 109 EKCPFPHVNVGKKEGVCKDFAVLGYCVRGVSCDKNH 144
>gi|323455692|gb|EGB11560.1| hypothetical protein AURANDRAFT_61826 [Aureococcus anophagefferens]
Length = 484
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVP-------------LTKS---------TKACCHFARNS 513
C Y +G C++G++CK+ H P LT+ K C F R
Sbjct: 137 CVPYNRGNCRKGERCKYDHRFTPAAMAVANYVEPRTLTREELARGRPARRKPCFDFVRKG 196
Query: 514 -CMKGDNCPFDH-------DLSKYPCENFVAKGFCNRGDNCLFSHK----LPPKEQDP 559
C +GD+CP+ H D K PC + + G C +GD C+++H LP K + P
Sbjct: 197 KCDRGDHCPYSHEDPAMLKDEDKKPCFDLLRHGRCLKGDACVYAHTGHEGLPAKPRRP 254
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 469 KPKTVKYCHHYL-KGRCQEGDKCKFSHDTVPLTKS--TKACCHFARNS-CMKGDNCPFDH 524
+P K C ++ KG+C GD C +SH+ + K K C R+ C+KGD C + H
Sbjct: 182 RPARRKPCFDFVRKGKCDRGDHCPYSHEDPAMLKDEDKKPCFDLLRHGRCLKGDACVYAH 241
Query: 525 D-------LSKYPCENFVAKGFCNRGDNCLFSHKLP 553
+ PC +G C++G C F+H +P
Sbjct: 242 TGHEGLPAKPRRPCFRMQREGRCDKGAACPFAHDVP 277
>gi|148231564|ref|NP_001086337.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
laevis]
gi|82183649|sp|Q6DJP7.1|CPSF4_XENLA RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|49522087|gb|AAH75128.1| MGC81862 protein [Xenopus laevis]
Length = 269
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKSACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 45.8 bits (107), Expect = 0.093, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 35/123 (28%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------ST 503
KTV C H+L+G C++GD+C+F H+ +TK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPESKI 121
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQDP 559
K C + R C G C H + C N++ GFC G NC F H +LP + P
Sbjct: 122 KDCPWYDRGFCKHGPLCRHRHT-RRVICVNYLV-GFCIEGPNCKFMHPRFELPMGTAEQP 179
Query: 560 PTP 562
P P
Sbjct: 180 PLP 182
>gi|326521084|dbj|BAJ96745.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN--SCMKGDNCPFDHDLSKYPCEN 533
C H+L+G C +GD C F H K+ C F R+ C + D C + H N
Sbjct: 61 CRHWLRGLCMKGDACGFLHQ---FDKARMPVCRFFRDYGECREPD-CAYKHSYDDVKECN 116
Query: 534 FVAKGFCNRGDNCLFSH 550
GFC G NC + H
Sbjct: 117 MYKMGFCPNGPNCRYKH 133
>gi|328770159|gb|EGF80201.1| hypothetical protein BATDEDRAFT_5960, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 147
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 33/113 (29%)
Query: 468 LKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD-- 525
+KP C H+++G C++G C F H P C H+ R C KG+ C F H+
Sbjct: 16 VKPPIKPICTHFIRGACRQGSSCPFQH---PQKMRAVVCKHWLRGLCKKGEVCEFLHEYN 72
Query: 526 LSKYP----------CEN------------------FVAKGFCNRGDNCLFSH 550
+ + P C N + A+GFC G C H
Sbjct: 73 MKRMPECWFFAKLGECTNPECQYLHIDPDSKIRECPWYARGFCKHGAECRHKH 125
Score = 44.3 bits (103), Expect = 0.34, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 506 CCHFARNSCMKGDNCPFDH--DLSKYPCENFVAKGFCNRGDNCLFSHK 551
C HF R +C +G +CPF H + C++++ +G C +G+ C F H+
Sbjct: 24 CTHFIRGACRQGSSCPFQHPQKMRAVVCKHWL-RGLCKKGEVCEFLHE 70
>gi|307211396|gb|EFN87523.1| Zinc finger CCCH domain-containing protein 3 [Harpegnathos
saltator]
Length = 200
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L G C D C + H V ++ +T C F + C+KG+ C H+ Y C F
Sbjct: 4 CKYFLDGCCTR-DACPYLH--VKVSSNTSICIDFLQGYCVKGNECQRRHE---YLCPEFD 57
Query: 536 AKGFCNRGDNCLFSHK 551
+G C++G+ C++ HK
Sbjct: 58 KRGICSKGEYCVYPHK 73
>gi|348673356|gb|EGZ13175.1| hypothetical protein PHYSODRAFT_316572 [Phytophthora sojae]
Length = 634
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 460 RRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLT--------KSTKACCHFAR 511
+ LK+ + KT + C ++ G C+ GD CK+ H P+ S++ C HF+R
Sbjct: 72 KTLKVSLQRRFKTTEPCRGFIAGICRYGDLCKYYHPAGPVVVPPEIQAIPSSRLCRHFSR 131
Query: 512 NSCMKGDNCPFDHDL 526
SC +G C F H L
Sbjct: 132 GSCAQGSECKFAHVL 146
>gi|449476092|ref|XP_002192710.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Taeniopygia guttata]
Length = 243
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 47.8 bits (112), Expect = 0.027, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 37/148 (25%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------ST 503
KTV C H+L+G C++GD+C+F H+ +TK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPESKI 121
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQDP 559
K C + R C G C H + C N++ GFC G C F H +LP + P
Sbjct: 122 KDCPWYDRGFCKHGPLCRHRHT-RRVICVNYLV-GFCPEGPACKFMHPRFELPMGTTEQP 179
Query: 560 PTPSTCTPELKPSPPLYASNLLKPLNNN 587
P P + K +P + +++ NNN
Sbjct: 180 PLPQPTQTQQKRTPQVIG--VMQSQNNN 205
>gi|50755569|ref|XP_414800.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Gallus gallus]
Length = 243
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 48.5 bits (114), Expect = 0.016, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 37/148 (25%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------ST 503
KTV C H+L+G C++GD+C+F H+ +TK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPESKI 121
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQDP 559
K C + R C G C H + C N++ GFC G C F H +LP + P
Sbjct: 122 KDCPWYDRGFCKHGPLCRHRHT-RRVICVNYLV-GFCPEGPTCKFMHPRFELPMGTTEQP 179
Query: 560 PTPSTCTPELKPSPPLYASNLLKPLNNN 587
P P + K +P + +++ NNN
Sbjct: 180 PLPQPAQTQQKRTPQVIG--VMQSQNNN 205
>gi|353239497|emb|CCA71406.1| hypothetical protein PIIN_05346 [Piriformospora indica DSM 11827]
Length = 926
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 499 LTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQD 558
+++ + C +F C++ D C F HDL + C F + C +G+NC F H+LPP
Sbjct: 521 MSRPGRVCRYFLAGECLRAD-CRFSHDLDRALCR-FWLRNACAKGENCEFMHRLPPNMVS 578
Query: 559 P 559
P
Sbjct: 579 P 579
>gi|346322469|gb|EGX92068.1| CCCH zinc finger protein [Cordyceps militaris CM01]
Length = 435
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--L 526
P V C +LK GRC G+ C SH+ + C HFA+ +C NC + H L
Sbjct: 271 PHKVAICKDFLKDGRCINGEHCDLSHELT--LERVPNCLHFAKGNCSNA-NCQYSHSAAL 327
Query: 527 SKYP-CENFVAKGFCNRGDNCLFSH 550
P CENF +G+C++ C H
Sbjct: 328 PSAPVCENFGYRGYCDKAATCTERH 352
>gi|18859059|ref|NP_571084.1| cleavage and polyadenylation specificity factor subunit 4 [Danio
rerio]
gi|1575709|gb|AAC60040.1| no arches [Danio rerio]
gi|28277462|gb|AAH45289.1| No arches [Danio rerio]
gi|182888966|gb|AAI64456.1| Nar protein [Danio rerio]
Length = 271
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C ++++ C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEYFMRAACMKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 46.6 bits (109), Expect = 0.069, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------ST 503
KTV C H+L+G C++GD+C+F H+ +TK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPESKI 121
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQDP 559
K C + R C G +C H + C N++ GFC G +C F H +LP + P
Sbjct: 122 KDCPWYDRGFCKHGPDCRHRHT-RRVICVNYLV-GFCPEGKSCKFMHPRFELPMGATEQP 179
Query: 560 PTP---STCTPELKPSPPLYASNLLKPLNNNKVSHQNVDALSN 599
P P T + P +S L L N +S+ N + N
Sbjct: 180 PLPQQVQTQQKQQNMQPINRSSQSLIQLTNPNISNNNHQRIPN 222
>gi|348677189|gb|EGZ17006.1| hypothetical protein PHYSODRAFT_314545 [Phytophthora sojae]
Length = 602
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKY 529
C HYL+G C+ D C F HDT +T C + R +C++ ++C F HD +Y
Sbjct: 252 CRHYLQGECRRAD-CMFLHDTDKIT-----CRFWLRGTCLQAEHCVFAHDFCEY 299
>gi|390596664|gb|EIN06065.1| hypothetical protein PUNSTDRAFT_145429 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 927
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPK 555
+ C +F C++ D C F HDL + C F +G C +G+NC F H LPP+
Sbjct: 530 RVCRYFLAGECLRAD-CRFSHDLERAMC-RFWLRGTCAKGENCEFLHHLPPE 579
>gi|432942710|ref|XP_004083045.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
isoform 1 [Oryzias latipes]
Length = 429
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD +T C F + +C+ GD C F+H
Sbjct: 22 CRYFMHGLCKEGDNCRYSHDLTSSKPATMICKFFQKGNCVYGDRCRFEH 70
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDL-SKYPCE---NFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C +F C +GDNC + HDL S P F KG C GD C F H ++++ PT
Sbjct: 22 CRYFMHGLCKEGDNCRYSHDLTSSKPATMICKFFQKGNCVYGDRCRFEHSKVARKEELPT 81
Query: 562 PSTCTP 567
T P
Sbjct: 82 SQTLLP 87
>gi|294940394|ref|XP_002782776.1| hypothetical protein Pmar_PMAR027433 [Perkinsus marinus ATCC 50983]
gi|239894726|gb|EER14571.1| hypothetical protein Pmar_PMAR027433 [Perkinsus marinus ATCC 50983]
Length = 231
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--------CCHF---ARNSCMKGDNCPFDH 524
C +Y +GRC +GD C +SHD V K KA C F C +GD C + H
Sbjct: 64 CRYYAQGRCAKGDACSYSHDEVAAGKLRKAHRDAMASVPCKFYIVLGRGCREGDACRYSH 123
Query: 525 DLSKYPCENFVAKGFCNR 542
+++ +PC G C +
Sbjct: 124 EVASFPCVRESISGRCGQ 141
>gi|310795354|gb|EFQ30815.1| hypothetical protein GLRG_05959 [Glomerella graminicola M1.001]
Length = 253
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 476 CHHYLKGRCQEGDKCK----FSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKY 529
C +L G C G C +S + P + C H+ R C KG++C F H+ L K
Sbjct: 44 CKSFLAGHCPLGASCPDRHAYSTSSNPSGGPSLVCKHWLRGLCKKGESCEFLHEYNLRKM 103
Query: 530 P-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
P C F+ G+C+ G+ CL+ H + P+ + PP P
Sbjct: 104 PECNFFMRNGYCSNGEECLYLH-IDPQSKLPPCP 136
>gi|156381166|ref|XP_001632137.1| predicted protein [Nematostella vectensis]
gi|156219188|gb|EDO40074.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 456 QLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCM 515
Q+G L P + + C ++KG C G C F H + + T C H+ R C
Sbjct: 22 QIGCISLPFP-GMDKSSAAVCDFFVKGLCNRGAYCPFRHTS---GEKTVVCKHWLRGLCK 77
Query: 516 KGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ C + H P K +D P
Sbjct: 78 KGDQCEFLHQYDMTKMPECYFYSKFGECS-NKKCQYLHIDPQSKIKDCP 125
Score = 43.5 bits (101), Expect = 0.54, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 33/110 (30%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------ST 503
KTV C H+L+G C++GD+C+F H +TK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHQ-YDMTKMPECYFYSKFGECSNKKCQYLHIDPQSKI 121
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLP 553
K C + R C G +C H + + C N++ GFC G NC HK P
Sbjct: 122 KDCPWYDRGFCKHGPHCRHRH-VRRVLCINYLC-GFCPDGPNC--KHKHP 167
>gi|17542568|ref|NP_501435.1| Protein T26A8.4 [Caenorhabditis elegans]
gi|351064679|emb|CCD73161.1| Protein T26A8.4 [Caenorhabditis elegans]
Length = 574
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN 533
+ C + +G C++GD C +SH + C +A + C KG C H ++PC++
Sbjct: 169 QICKFFREGYCRDGDNCLYSHQAEDSLRRPVLCNFYANSFCKKGLQCLMLH--GEFPCKS 226
Query: 534 FVAKGFCNRGDNCLFSH 550
F KG CN D C FSH
Sbjct: 227 F-HKGQCNH-DPCRFSH 241
>gi|5931741|emb|CAB56623.1| zinc finger protein [Rattus norvegicus]
Length = 229
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 20 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 75
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 76 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 124
>gi|294948266|ref|XP_002785677.1| hypothetical protein Pmar_PMAR025425 [Perkinsus marinus ATCC 50983]
gi|239899700|gb|EER17473.1| hypothetical protein Pmar_PMAR025425 [Perkinsus marinus ATCC 50983]
Length = 228
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 496 TVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPK 555
TV + AC FAR C G +CPF HD C ++ G C G +C FSH+LP
Sbjct: 74 TVTAHEEISACHFFARGMCRNGTSCPFRHDPKSIICTYYL-HGNCRNGISCRFSHELPDT 132
Query: 556 EQ-------DPPTPSTC 565
+Q D P P C
Sbjct: 133 QQPAVEEGVDGPPPDVC 149
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 22/106 (20%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL--SKYP 530
+ CH + +G C+ G C F HD + C ++ +C G +C F H+L ++ P
Sbjct: 81 ISACHFFARGMCRNGTSCPFRHDPKSII-----CTYYLHGNCRNGISCRFSHELPDTQQP 135
Query: 531 -------------CENFVAKGFCNRGDNCLFSH-KLPPKEQDPPTP 562
C+ F G C G +C + H K P + P P
Sbjct: 136 AVEEGVDGPPPDVCK-FFWHGSCRAGSSCRWRHVKAPSRLSAAPPP 180
>gi|313236853|emb|CBY12104.1| unnamed protein product [Oikopleura dioica]
gi|313240029|emb|CBY32388.1| unnamed protein product [Oikopleura dioica]
Length = 286
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 473 VKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---DLSK 528
VK C +LK G C + CK H + P T + C HF ++SC KG NCPF H +
Sbjct: 85 VKICPQFLKRGECDHSN-CKLRHTSDPHT--MEHCVHFIKSSCTKGKNCPFPHVKVAENA 141
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
C NF +G+C +G C H
Sbjct: 142 RVCINF-QQGYCQKGLECKLRH 162
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL P T+++C H++K C +G C F H V + ++ + C +F + C KG C
Sbjct: 103 KLRHTSDPHTMEHCVHFIKSSCTKGKNCPFPH--VKVAENARVCINFQQGYCQKGLECKL 160
Query: 523 DHD 525
H+
Sbjct: 161 RHE 163
>gi|302782087|ref|XP_002972817.1| hypothetical protein SELMODRAFT_413447 [Selaginella moellendorffii]
gi|300159418|gb|EFJ26038.1| hypothetical protein SELMODRAFT_413447 [Selaginella moellendorffii]
Length = 568
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 21/97 (21%)
Query: 481 KGRCQEGDKCKFSH---DTVPLTKSTKACCHF-ARNSCMKGDNCPFDHD----------- 525
KG C GD+CKF H + V + K ++C F + SC +G C + H
Sbjct: 261 KGSCARGDRCKFKHAFENGVLIPK--RSCYDFITKGSCERGSECRYLHSSDENASSTAAD 318
Query: 526 ----LSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQD 558
L C NF KG C +GD+C FSH K+Q+
Sbjct: 319 NEQQLPPGSCFNFFKKGSCEKGDDCRFSHSSERKQQE 355
>gi|149034888|gb|EDL89608.1| rCG42591, isoform CRA_c [Rattus norvegicus]
Length = 180
Score = 51.2 bits (121), Expect = 0.003, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 27/98 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYP--- 530
C +LK C +G C F H + + T C H+ R C KGD C F H D++K P
Sbjct: 9 CEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 65
Query: 531 ------------------CENFVAKGFCNRGDNCLFSH 550
C N++ GFC G +C F H
Sbjct: 66 FYSKFGPLCRHRHTRRVICVNYLV-GFCPEGPSCKFMH 102
>gi|336381124|gb|EGO22276.1| hypothetical protein SERLADRAFT_472853 [Serpula lacrymans var.
lacrymans S7.9]
Length = 414
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 473 VKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---DLSK 528
+ C ++L+G C + C SHD P + T C HFA N D CPF H +
Sbjct: 212 IAICWNFLQGCCPNDAAFCNLSHDPTP--ERTPLCVHFANNGRCTRDKCPFPHVRVGPRQ 269
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
C +F G+C++G +C H
Sbjct: 270 GVCRDFAVLGYCDKGLDCDMQH 291
>gi|56118476|ref|NP_001007933.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
(Silurana) tropicalis]
gi|82181478|sp|Q66KE3.1|CPSF4_XENTR RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|51513396|gb|AAH80440.1| cpsf4 protein [Xenopus (Silurana) tropicalis]
Length = 269
Score = 51.2 bits (121), Expect = 0.003, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKSACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 43.5 bits (101), Expect = 0.50, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|242093910|ref|XP_002437445.1| hypothetical protein SORBIDRAFT_10g027200 [Sorghum bicolor]
gi|241915668|gb|EER88812.1| hypothetical protein SORBIDRAFT_10g027200 [Sorghum bicolor]
Length = 645
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN--SCMKGDNCPFDHDLSKYPCEN 533
C H+L+G C +G+ C F H K+ C F R+ C + D C + H N
Sbjct: 62 CRHWLRGLCMKGEACGFLHQ---FDKARMPVCRFFRDFGECREPD-CAYKHSYDDVKECN 117
Query: 534 FVAKGFCNRGDNCLFSH-KLP 553
GFC G NC + H KLP
Sbjct: 118 MYKMGFCPNGPNCRYKHIKLP 138
>gi|66815629|ref|XP_641831.1| hypothetical protein DDB_G0279181 [Dictyostelium discoideum AX4]
gi|60469873|gb|EAL67859.1| hypothetical protein DDB_G0279181 [Dictyostelium discoideum AX4]
Length = 611
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSH----DTVPLTKSTKACCHFARNSCMKGDNCPFDH- 524
PK V+ C ++ G C + D CK H D +P+ CH N DNCP+ H
Sbjct: 386 PKRVRICPKFIAGNCDDPD-CKLQHSLDLDLMPI-------CHLFLNRMCTNDNCPYLHV 437
Query: 525 DLSK--YPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
+LSK C +F++ G+C +G C H KE+
Sbjct: 438 NLSKDTEVCPDFIS-GYCPKGSKCELKHTYTKKEK 471
>gi|400595283|gb|EJP63088.1| CCCH zinc finger protein [Beauveria bassiana ARSEF 2860]
Length = 394
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--L 526
P V C +LK GRC G+ C SH+ + C HFA+ +C NC + H L
Sbjct: 250 PNKVAVCKDFLKEGRCINGEHCDLSHELT--MERVPNCLHFAKGNC-SNLNCQYSHSAAL 306
Query: 527 SKYP-CENFVAKGFCNRGDNCLFSH 550
P CE+F +G+C +G C H
Sbjct: 307 PTAPVCEDFGYRGYCGKGGECTERH 331
>gi|392573906|gb|EIW67044.1| hypothetical protein TREMEDRAFT_45481 [Tremella mesenterica DSM
1558]
Length = 924
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGDNCPFDHDL 526
V+ C +YL G C+ D C+FSHD +A C F R C KG NC F H L
Sbjct: 535 VRMCRYYLTGECRRSD-CRFSHDL------ERALCRFWLRGHCAKGPNCEFLHHL 582
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 482 GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCN 541
GR G+ P + C ++ C + D C F HDL + C F +G C
Sbjct: 514 GRTHNGNLSPGYGPRSPGGPPVRMCRYYLTGECRRSD-CRFSHDLERALCR-FWLRGHCA 571
Query: 542 RGDNCLFSHKLP 553
+G NC F H LP
Sbjct: 572 KGPNCEFLHHLP 583
>gi|449548074|gb|EMD39041.1| hypothetical protein CERSUDRAFT_81811 [Ceriporiopsis subvermispora
B]
Length = 849
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 498 PLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLP 553
PL + + C +F C++ D C F HDL + C F +G C +GD C F H LP
Sbjct: 451 PLPGNNRVCRYFLAGECLRAD-CRFSHDLERALCR-FWLRGTCAKGDACEFLHHLP 504
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFA-RNSCMKGDNCPFDHDL 526
P + C ++L G C D C+FSHD +A C F R +C KGD C F H L
Sbjct: 453 PGNNRVCRYFLAGECLRAD-CRFSHDL------ERALCRFWLRGTCAKGDACEFLHHL 503
>gi|387015182|gb|AFJ49710.1| Cleavage and polyadenylation specificity factor subunit 4-like
[Crotalus adamanteus]
Length = 268
Score = 51.2 bits (121), Expect = 0.003, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCDFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P C + G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKYGECSNKE-CPFLHIDPESKIKDCP 125
Score = 43.5 bits (101), Expect = 0.45, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKYGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|327288272|ref|XP_003228852.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Anolis carolinensis]
Length = 269
Score = 51.2 bits (121), Expect = 0.003, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCDFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P C + G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKYGECSNKE-CPFLHIDPESKIKDCP 125
Score = 43.5 bits (101), Expect = 0.46, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKYGECSNKECPFLHIDPESK 120
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 121 IKDCPWYDRGFCKHGPLCRHRH 142
>gi|198425225|ref|XP_002128560.1| PREDICTED: similar to zinc finger CCCH-type containing 3 [Ciona
intestinalis]
Length = 565
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 474 KYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS--KYP 530
K+C +Y + GRC G KC ++HD C F R +C + +NCPF H LS K P
Sbjct: 371 KFCIYYNRFGRCNRGTKCPYTHD----PDRVALCTKFLRGTC-RIENCPFSHKLSKEKMP 425
Query: 531 CENFVAKGFCNRGDNCLFSH 550
+F +G C D C + H
Sbjct: 426 VCSFFLRGKCATKD-CPYLH 444
>gi|396082345|gb|AFN83955.1| putative zinc finger domain-containing protein [Encephalitozoon
romaleae SJ-2008]
Length = 119
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 503 TKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
T C F NSC GDNC + HD SK+PC+ F + C+R D C FSH
Sbjct: 45 TILCKFFLMNSCKHGDNCTYSHDTSKFPCKAFHLRKSCSRKD-CPFSH 91
>gi|358387184|gb|EHK24779.1| hypothetical protein TRIVIDRAFT_178368 [Trichoderma virens Gv29-8]
Length = 425
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +LK G+C G+ C SH+ P + +C H A+ C + D CPF H +
Sbjct: 263 PDKVALCKDFLKDGKCPNGEACDLSHEFTP--ERVPSCLHHAKGQCSRPD-CPFTHSKAS 319
Query: 529 --YP-CENFVAKGFCNRGDNCLFSH 550
P CE F G+C++G +C H
Sbjct: 320 PGAPVCEAFGFCGYCDKGADCTDRH 344
>gi|409040962|gb|EKM50448.1| hypothetical protein PHACADRAFT_129648 [Phanerochaete carnosa
HHB-10118-sp]
Length = 260
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 459 VRRLKLPQNLKPKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKG 517
R L P P + C +L+G C C SHD P + T C HFA
Sbjct: 34 TRGLTCPYQHDPAKIAICWPFLQGNCPHTTSTCPLSHDPTP--QRTPLCVHFANQGRCTR 91
Query: 518 DNCPFDH---DLSKYPCENFVAKGFCNRGDNCLFSH 550
NCPF H + C +F G+C +G +C H
Sbjct: 92 PNCPFPHVRVGAREGVCRDFAVLGYCEKGLDCENQH 127
>gi|164657462|ref|XP_001729857.1| hypothetical protein MGL_2843 [Malassezia globosa CBS 7966]
gi|159103751|gb|EDP42643.1| hypothetical protein MGL_2843 [Malassezia globosa CBS 7966]
Length = 500
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 31/134 (23%)
Query: 448 KKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLK-GRCQEGDKCKFSHD----------- 495
++ A+ R+LG + + KT + C +Y + G C+ G +C F HD
Sbjct: 210 QRLAKLGRKLGHAHKQQRALERAKTPQLCTYYTRTGTCRRGTQCPFIHDDQRKALCPGVL 269
Query: 496 -----TVP----LTKSTKA------CCHFAR-NSCMKGDNCPFDHDLSKYP---CENFVA 536
+P L T+ C HF R +SC GD C F H + C F
Sbjct: 270 KPSGCVLPPGTCLLSHTRCPQNVPHCVHFLRLHSCRNGDACAFTHAQVAHDAPVCRAFAL 329
Query: 537 KGFCNRGDNCLFSH 550
G+C++GD CL H
Sbjct: 330 LGWCDQGDKCLHRH 343
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFA-RNSCMKGDNCPFDHDLS 527
P+ V +C H+L+ C+ GD C F+H V C FA C +GD C H
Sbjct: 289 PQNVPHCVHFLRLHSCRNGDACAFTHAQV--AHDAPVCRAFALLGWCDQGDKCLHRH--- 343
Query: 528 KYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTP 567
C +F AKG C C +H P +P S TP
Sbjct: 344 AKECPDFTAKGTCT-DPACRLAHVSIPPRLEPSASSIDTP 382
>gi|341038657|gb|EGS23649.1| zinc finger domain-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 444
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 470 PKTVKYCHHYL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH-DLS 527
P V C +L +G C G+ C SHD P T C HFAR+SC K D C + H LS
Sbjct: 272 PHKVAICKDFLLQGDCPNGEHCDLSHDPTPERMPT--CLHFARDSCTKSD-CKYVHVKLS 328
Query: 528 KYP--CENFVAKGFCNRGDNCLFSHKL 552
C +F G+C +G +C H
Sbjct: 329 PTAKVCHDFGFYGYCVKGASCPDRHAF 355
>gi|432942712|ref|XP_004083046.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
isoform 2 [Oryzias latipes]
Length = 436
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD +T C F + +C+ GD C F+H
Sbjct: 22 CRYFMHGLCKEGDNCRYSHDLTSSKPATMICKFFQKGNCVYGDRCRFEH 70
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDL-SKYPCE---NFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C +F C +GDNC + HDL S P F KG C GD C F H ++++ PT
Sbjct: 22 CRYFMHGLCKEGDNCRYSHDLTSSKPATMICKFFQKGNCVYGDRCRFEHSKVARKEELPT 81
Query: 562 PSTCTP 567
T P
Sbjct: 82 SQTLLP 87
>gi|297850590|ref|XP_002893176.1| hypothetical protein ARALYDRAFT_313049 [Arabidopsis lyrata subsp.
lyrata]
gi|297339018|gb|EFH69435.1| hypothetical protein ARALYDRAFT_313049 [Arabidopsis lyrata subsp.
lyrata]
Length = 2132
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C +YL+G C + C + H V + S C F + C GD C
Sbjct: 1950 KLTHKVIPERMPDCSYYLQGLCN-NEACPYRH--VHVNPSAPICDGFLKGYCSDGDECRK 2006
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
H Y C F A G C++G C H PK Q
Sbjct: 2007 KH---SYNCPVFEATGSCSQGSKCKLHH---PKNQ 2035
>gi|296811066|ref|XP_002845871.1| mRNA 3'-end-processing protein yth1 [Arthroderma otae CBS 113480]
gi|238843259|gb|EEQ32921.1| mRNA 3'-end-processing protein yth1 [Arthroderma otae CBS 113480]
Length = 251
Score = 50.8 bits (120), Expect = 0.003, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH---DLSKYPC 531
C HYLKG C++G KC++ H+ + C F+RN C GD+C + H D C
Sbjct: 89 CKHYLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQC 146
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ KGFC G C H
Sbjct: 147 EHY-DKGFCPLGPICAKRH 164
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 21/106 (19%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-------------VPLTKSTKACCHFARNSCMKGDN 519
V C Y +G C G C H T T + C H+ + C KG
Sbjct: 43 VPVCKAYREGHCPLGPLCSERHPTPSRISTSSSPAIAPSSTHGSLVCKHYLKGLCKKGLK 102
Query: 520 CPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F GFC GD+CL+ H KLP E
Sbjct: 103 CEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCEH 148
>gi|268553263|ref|XP_002634617.1| Hypothetical protein CBG18471 [Caenorhabditis briggsae]
Length = 573
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C + +G C++GDKC +SH + + C +A + C KG C H ++PC+ F
Sbjct: 175 CKFFREGYCRDGDKCSYSHQAEDSLRRPQLCNFYANSFCKKGLQCLMLH--GEFPCKQF- 231
Query: 536 AKGFCNRGDNCLFSH 550
K C+ DNC +SH
Sbjct: 232 HKNQCH-NDNCRYSH 245
>gi|426201512|gb|EKV51435.1| hypothetical protein AGABI2DRAFT_62161 [Agaricus bisporus var.
bisporus H97]
Length = 290
Score = 50.8 bits (120), Expect = 0.003, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 32/131 (24%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDH---------- 524
C H+L+G C++GD C+F H+ + C FA+ C GD C + H
Sbjct: 95 CKHWLRGLCKKGDACEFLHEYN--LRRMPECYWFAKYGYCSAGDECLYAHPKERKIECPD 152
Query: 525 ---------------DLSKYPCENFVAKGFCNRGDNCLFSH---KLPPKEQDPPTPSTCT 566
+ K C+ ++ GFC G C H LP P P+
Sbjct: 153 YNRGFCKLGPICPRKHVRKVACQLYLT-GFCPMGPECPRGHPKPNLPLASAYEPAPALSN 211
Query: 567 PELKPSPPLYA 577
EL P PP +A
Sbjct: 212 RELGPPPPGFA 222
>gi|327272280|ref|XP_003220913.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Anolis
carolinensis]
Length = 486
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD ++S C +F R C GD C ++H
Sbjct: 66 CRYFMHGVCKEGDNCRYSHDLY-TSQSAMVCRYFQRGCCAYGDRCRYEH 113
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 12/80 (15%)
Query: 505 ACCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
AC +F C +GDNC + HDL S C F +G C GD C + H P K ++
Sbjct: 65 ACRYFMHGVCKEGDNCRYSHDLYTSQSAMVCRYF-QRGCCAYGDRCRYEHTKPLKREEVT 123
Query: 561 T--PSTCT-----PELKPSP 573
T PST T ++ PSP
Sbjct: 124 TVSPSTKTFPSASTDVTPSP 143
>gi|444317817|ref|XP_004179566.1| hypothetical protein TBLA_0C02360 [Tetrapisispora blattae CBS 6284]
gi|387512607|emb|CCH60047.1| hypothetical protein TBLA_0C02360 [Tetrapisispora blattae CBS 6284]
Length = 217
Score = 50.8 bits (120), Expect = 0.003, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH---DLSKYPC 531
C H+L+G C++G +C+F H+ + C FARN C + CP+ H + C
Sbjct: 70 CKHWLRGLCKKGSRCEFLHEYN--LRRMPECVFFARNGFCTQAPECPYRHVKPEDHVELC 127
Query: 532 ENFVAKGFCNRGDNCLFSH 550
++ +GFC RG +C H
Sbjct: 128 TDY-QRGFCPRGPSCARRH 145
>gi|449469086|ref|XP_004152252.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 31-like [Cucumis sativus]
Length = 998
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 503 TKACCHFARNSCMKGDNCPFDHDLS--KYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
T C +F SC +G C F H L + C+ F + C GD+CLFSH P +
Sbjct: 708 TSLCVYFLNGSCNRGSQCLFSHSLQSKRATCKFFFSLQGCRNGDSCLFSHDQSPSKSLSF 767
Query: 561 TPSTCTPE 568
+ C PE
Sbjct: 768 KSTLCLPE 775
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACC--HFARNSCMKGDNCPFDHD 525
C ++L G C G +C FSH +S +A C F+ C GD+C F HD
Sbjct: 711 CVYFLNGSCNRGSQCLFSHS----LQSKRATCKFFFSLQGCRNGDSCLFSHD 758
>gi|440494580|gb|ELQ76948.1| Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit),
partial [Trachipleistophora hominis]
Length = 257
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 503 TKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
++ C F +SC KGD C + HD+ + PC+ F K C+R NC+FSH
Sbjct: 185 SQICRFFLTHSCTKGDACSYSHDIKRLPCKAFHMKKNCSRK-NCMFSH 231
>gi|336368313|gb|EGN96656.1| hypothetical protein SERLA73DRAFT_140311 [Serpula lacrymans var.
lacrymans S7.3]
Length = 421
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 473 VKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---DLSK 528
+ C ++L+G C + C SHD P + T C HFA N D CPF H +
Sbjct: 212 IAICWNFLQGCCPNDAAFCNLSHDPTP--ERTPLCVHFANNGRCTRDKCPFPHVRVGPRQ 269
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
C +F G+C++G +C H
Sbjct: 270 GVCRDFAVLGYCDKGLDCDMQH 291
>gi|380484985|emb|CCF39651.1| hypothetical protein CH063_10425 [Colletotrichum higginsianum]
Length = 251
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTV----PLTKSTKACCHFARNSCMKGDNCPFDHD--LSKY 529
C +L G C G C H + P + C H+ R C KG++C F H+ L K
Sbjct: 44 CKSFLAGHCPLGASCPDRHASSTSSNPSGGPSLVCKHWLRGLCKKGESCEFLHEYNLRKM 103
Query: 530 P-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
P C F+ G+C+ G+ CL+ H + P+ + PP P
Sbjct: 104 PECNFFMRNGYCSNGEECLYLH-IDPQSKLPPCP 136
>gi|328874246|gb|EGG22612.1| hypothetical protein DFA_04742 [Dictyostelium fasciculatum]
Length = 542
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLT--KSTKACCHFARNSCMKGDNCPFDH-DL 526
PK V+ C ++ G+C + + C H V + C F R CM DNCP+ H +
Sbjct: 384 PKRVRICFKFISGKCDD-ETCTLQHKEVSELDPEQMPVCYQFLRGMCM-NDNCPYLHVHV 441
Query: 527 SK--YPCENFVAKGFCNRGDNCLFSH 550
S+ C +F+ KGFC++G +C H
Sbjct: 442 SRDAQVCPDFL-KGFCSKGSSCQMKH 466
>gi|258566097|ref|XP_002583793.1| hypothetical protein UREG_06760 [Uncinocarpus reesii 1704]
gi|237907494|gb|EEP81895.1| hypothetical protein UREG_06760 [Uncinocarpus reesii 1704]
Length = 251
Score = 50.8 bits (120), Expect = 0.004, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C HYLKG C++G KC++ H+ + C F+R+ C GD+C + H + +K P C
Sbjct: 89 CKHYLKGLCKKGIKCEYLHEYN--LRRMPECQSFSRSGYCPNGDDCLYQHVPEEAKLPSC 146
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ KGFC G C H
Sbjct: 147 EHY-EKGFCPLGPLCAKKH 164
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 473 VKYCHHYLKGRCQEGDKC--------KFSHDTVPL-----TKSTKACCHFARNSCMKGDN 519
V C Y +G C G C + S T P T + C H+ + C KG
Sbjct: 43 VPVCKAYREGHCPLGPMCPDRHPTPSRISTATSPAIAPSSTHGSLVCKHYLKGLCKKGIK 102
Query: 520 CPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLY 576
C + H+ L + P C++F G+C GD+CL+ H P+E P+ P PL
Sbjct: 103 CEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHV--PEEAKLPSCEHYEKGFCPLGPLC 160
Query: 577 A 577
A
Sbjct: 161 A 161
>gi|326918190|ref|XP_003205374.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Meleagris gallopavo]
Length = 953
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C + C +SH V +++ + C F + C G+ C H L C +F
Sbjct: 750 CSYFLKGICNNSN-CPYSH--VYVSRKAEVCQDFLKGYCPMGEKCKKKHTLV---CPDFA 803
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPS 572
KG C RG C H P K++ +P C E PS
Sbjct: 804 KKGICPRGACCKLLH--PKKKRH--SPGNCAGEDPPS 836
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 506 CCHFAR-NSCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDN-CLFSHKL 552
C ++ R C +G+NCP+ HD K C F+ +G C + D C FSHK+
Sbjct: 694 CMYYNRFGKCNRGENCPYIHDPEKVAVCTRFL-RGTCKKTDGKCPFSHKV 742
>gi|348680071|gb|EGZ19887.1| hypothetical protein PHYSODRAFT_489640 [Phytophthora sojae]
Length = 536
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 44/124 (35%), Gaps = 43/124 (34%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPL-----------------------TKSTKACCHFARN 512
C +Y KG+C+ G C+F H P C +F
Sbjct: 347 CQNYQKGKCKRGSACRFRHVAAPAGGYKEPEEDEWKAPVRVALPVAAVAEVAVCRNFQNG 406
Query: 513 SCMKGDNCPFDH--------------DLSKYP------CENFVAKGFCNRGDNCLFSHKL 552
CM+G +C F H ++S+Y C N+ G C RGDNC F H
Sbjct: 407 RCMRGASCRFAHTGQVAQEAPASAVEEVSEYQKRFQSVCYNWQRGGSCVRGDNCSFQHDG 466
Query: 553 PPKE 556
P E
Sbjct: 467 APSE 470
>gi|384247363|gb|EIE20850.1| hypothetical protein COCSUDRAFT_9790, partial [Coccomyxa
subellipsoidea C-169]
Length = 76
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C +G++C F H P + C + K CPF H+L + N
Sbjct: 4 CTYWLKGLCMKGEECGFLHQLDP--QRMPVCRTLLKFGECKDPECPFKHNLEEVKECNMY 61
Query: 536 AKGFCNRGDNCLFSH 550
GFC G C F H
Sbjct: 62 KLGFCVYGPRCRFRH 76
>gi|190345069|gb|EDK36887.2| hypothetical protein PGUG_00985 [Meyerozyma guilliermondii ATCC
6260]
Length = 199
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 482 GRCQEGDKCKFSHDTVPLTKSTKACC-HFARNSCMKGDNCPFDHD--LSKYP-CENFVAK 537
G C G+ C H VP S K C H+ R C K D+C F H+ L K P C +
Sbjct: 47 GSCPNGNNCPNKH--VPTMYSNKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFYSKN 104
Query: 538 GFCNRGDNCLFSHKLPPKEQDPPTPS---TCTPELKPSPPLYASNLLKPL 584
GFC + CL+ H + P+ + P P+ PE P + ++ PL
Sbjct: 105 GFCTQTPECLYLH-VDPQSKIPACPNYEKGFCPEGPKCPNRHVRKIMCPL 153
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D C+F H+ + C +++N C + C + H SK P C
Sbjct: 70 CKHWLRGLCKKNDHCEFLHEYN--LRKMPECLFYSKNGFCTQTPECLYLHVDPQSKIPAC 127
Query: 532 ENFVAKGFCNRGDNCLFSH 550
N+ KGFC G C H
Sbjct: 128 PNY-EKGFCPEGPKCPNRH 145
>gi|332243383|ref|XP_003270859.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Nomascus
leucogenys]
Length = 482
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCE---NFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS PC + +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPCSVVCKYFQRGYCIYGDRCRYEHSKPLKQEE 116
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + + + C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD-LSDSPCSVVCKYFQRGYCIYGDRCRYEH 108
>gi|355680860|gb|AER96663.1| cleavage and polyadenylation specific factor 4, 30kDa [Mustela
putorius furo]
Length = 102
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK 537
KGD C F H D++K P F +K
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSK 101
>gi|289541506|gb|ADD09873.1| putative zinc finger C-x8-C-x5-C-x3-H type, partial [Plasmodium
berghei]
Length = 87
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
C ++ K G+C + C +SHD P+ K +K C + +C K DNC F HD + + C N
Sbjct: 16 CKYFFKKGKCLHNENCNYSHDVTPIYKISKLCKFLIKGNCHK-DNCMFSHDYNFFFCRNN 74
Query: 535 VAKGFC 540
+ C
Sbjct: 75 LINNSC 80
>gi|242222895|ref|XP_002477139.1| predicted protein [Postia placenta Mad-698-R]
gi|220723492|gb|EED77661.1| predicted protein [Postia placenta Mad-698-R]
Length = 316
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 470 PKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P + C ++L+G C + C SHD P + T C HFA N NCPF H
Sbjct: 114 PTKIAICWNFLQGNCPNTAETCALSHDPTP--ERTPLCVHFANNGRCHRANCPFPHVRVG 171
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
+ C +F G+C +G +C
Sbjct: 172 KREGVCRDFAVLGYCEKGLDC 192
>gi|212539576|ref|XP_002149943.1| mRNA cleavage and polyadenylation specificity factor complex
subunit, putative [Talaromyces marneffei ATCC 18224]
gi|210067242|gb|EEA21334.1| mRNA cleavage and polyadenylation specificity factor complex
subunit, putative [Talaromyces marneffei ATCC 18224]
Length = 292
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYPCE 532
C H+LKG C++G KC++ H+ + C F+R+ C G++C + H + ++ PC
Sbjct: 129 CKHFLKGLCKKGFKCEYLHEYN--LRRMPECASFSRSGYCPNGEDCLYHHVRETARLPCC 186
Query: 533 NFVAKGFCNRGDNCLFSH 550
+GFC G C H
Sbjct: 187 EHYDRGFCPLGPICAKQH 204
Score = 46.2 bits (108), Expect = 0.072, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 18/96 (18%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVP--LTKSTKA-------------CCHFARNSCMKG 517
V C + +G C G C H T T ST A C HF + C KG
Sbjct: 81 VPVCKAFKEGHCPLGPTCPDRHPTPSRVTTSSTNASGLAPSVTHGSLVCKHFLKGLCKKG 140
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH 550
C + H+ L + P C +F G+C G++CL+ H
Sbjct: 141 FKCEYLHEYNLRRMPECASFSRSGYCPNGEDCLYHH 176
>gi|403338887|gb|EJY68686.1| Protein CPSF-4 [Oxytricha trifallax]
Length = 373
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 34/111 (30%)
Query: 469 KPKTVKYCHHYLKGRCQ-----------------------------EGDKCKFSHDTVPL 499
K KTV C H+L GRC+ +GDKC F H +P
Sbjct: 28 KKKTV--CVHWLVGRCKMEENCPFLHVMVEDKIPPCRYFIQDGVCSKGDKCVFRH-VIPQ 84
Query: 500 TKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
K T+ C ++ R C G C F+H + K CEN++ GFC +G +C H
Sbjct: 85 EKRTEDCPYYERGFCRMGLFCTFNH-IHKKICENYMY-GFCPKGPDCEKEH 133
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDLSK---YPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
K C H+ C +NCPF H + + PC F+ G C++GD C+F H +P +++
Sbjct: 28 KKKTVCVHWLVGRCKMEENCPFLHVMVEDKIPPCRYFIQDGVCSKGDKCVFRHVIPQEKR 87
Query: 558 DPPTP 562
P
Sbjct: 88 TEDCP 92
>gi|409083443|gb|EKM83800.1| hypothetical protein AGABI1DRAFT_33150 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 290
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 32/131 (24%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDH---------- 524
C H+L+G C++GD C+F H+ + C FA+ C GD C + H
Sbjct: 95 CKHWLRGLCKKGDACEFLHEYN--LRRMPECYWFAKYGYCSAGDECLYAHPKERKIECPD 152
Query: 525 ---------------DLSKYPCENFVAKGFCNRGDNCLFSH---KLPPKEQDPPTPSTCT 566
+ K C+ ++ GFC G C H LP P P+
Sbjct: 153 YNRGFCKLGPICPRKHVRKVACQLYLT-GFCPMGPECPRGHPKPNLPLASAYEPPPALSN 211
Query: 567 PELKPSPPLYA 577
EL P PP +A
Sbjct: 212 RELGPPPPGFA 222
>gi|315051880|ref|XP_003175314.1| mRNA 3'-end-processing protein yth1 [Arthroderma gypseum CBS
118893]
gi|311340629|gb|EFQ99831.1| mRNA 3'-end-processing protein yth1 [Arthroderma gypseum CBS
118893]
Length = 251
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 21/106 (19%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-------------VPLTKSTKACCHFARNSCMKGDN 519
V C Y +G C G C H T T + C H+ + C KG
Sbjct: 43 VPVCKAYREGHCPLGPLCAERHPTPSRISTSSSPAIAPSSTHGSLVCKHYLKGLCKKGLK 102
Query: 520 CPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F GFC GD+CL+ H KLP E
Sbjct: 103 CEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCEH 148
Score = 50.4 bits (119), Expect = 0.005, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH---DLSKYPC 531
C HYLKG C++G KC++ H+ + C F+RN C GD+C + H D C
Sbjct: 89 CKHYLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQC 146
Query: 532 ENFVAKGFCNRGDNCLFSH---KLPPKEQDP--PTPSTCTPELKPSPPLYASNLLKP 583
E++ +GFC G C H KL P TCT + + P ++ NL KP
Sbjct: 147 EHY-DQGFCPLGPICAKRHVRRKLCRFYLAGFCPAGKTCT---EGAHPRWSENLPKP 199
>gi|224066791|ref|XP_002302217.1| predicted protein [Populus trichocarpa]
gi|222843943|gb|EEE81490.1| predicted protein [Populus trichocarpa]
Length = 2120
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C ++L+G C + C + H V + + C F R C G+ CP
Sbjct: 1934 KLTHKVIPERMPDCSYFLQGLCTNKN-CPYRH--VHVNPNASTCEGFLRGYCADGNECPK 1990
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
H Y C +F A G C +G C H
Sbjct: 1991 KH---SYVCPSFEAIGSCPQGSKCKLHH 2015
>gi|158294672|ref|XP_001688720.1| AGAP005735-PA [Anopheles gambiae str. PEST]
gi|157015674|gb|EDO63726.1| AGAP005735-PA [Anopheles gambiae str. PEST]
Length = 707
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 457 LGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMK 516
L +R K P+ PK V C +L+G C D C SHD L K C F C++
Sbjct: 429 LAHQRGKCPKVHDPKHVSICQRFLRGECLL-DGCLLSHDITSLEK-MPVCRFFLEGRCVR 486
Query: 517 GDNCPFDHDL---SKYPCENFVAKGFCNRGDNCLFSH 550
D CP+ H S C+ F+ GFC+ D C H
Sbjct: 487 -DPCPYLHKKVSESVRICDAFL-NGFCSLADKCPNRH 521
>gi|332025118|gb|EGI65298.1| Zinc finger CCCH domain-containing protein 3 [Acromyrmex
echinatior]
Length = 651
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 464 LPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
L ++ P+ + C ++L G C D C + H V ++ +T C F + C KG+ C
Sbjct: 459 LSHDVGPEKMPTCKYFLDGCCTR-DACPYLH--VKVSSNTSICIDFLQGYCAKGNKCQRR 515
Query: 524 HDLSKYPCENFVAKGFCNRGDNCLFSHK 551
H+ Y C F G C++G+ C + HK
Sbjct: 516 HE---YLCPEFNKSGNCSKGECCPYPHK 540
>gi|307106713|gb|EFN54958.1| hypothetical protein CHLNCDRAFT_134725 [Chlorella variabilis]
Length = 325
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLT-----KSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
C +L+G C +G C F HD +T + + C F + C KG CP+ HD +K P
Sbjct: 9 CQFFLRGSCGKGSLCPFRHDPSKITGFRQQQGQQDCLFFLQGRCTKGSLCPYRHDPAKLP 68
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 14/67 (20%)
Query: 500 TKSTKACCHFARNSCMKGDNCPFDHDLSKYP----------CENFVAKGFCNRGDNCLFS 549
T+S C F R SC KG CPF HD SK C F+ +G C +G C +
Sbjct: 3 TRSFVDCQFFLRGSCGKGSLCPFRHDPSKITGFRQQQGQQDCLFFL-QGRCTKGSLCPYR 61
Query: 550 H---KLP 553
H KLP
Sbjct: 62 HDPAKLP 68
>gi|312069897|ref|XP_003137896.1| hypothetical protein LOAG_02310 [Loa loa]
Length = 222
Score = 50.4 bits (119), Expect = 0.005, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 33/116 (28%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--------DLS 527
C H+L+G C++GD+C+F H+ L+K + C F++ CPF H D
Sbjct: 89 CKHWLRGLCKKGDQCEFLHE-YDLSKMPE-CFFFSKYMACSNRECPFRHIDPESKIKDCP 146
Query: 528 KYP-------------------CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
Y C NF+A GFC G +C ++H P PP +T
Sbjct: 147 WYDRGFCRHGPFCKHRHRRRVLCPNFLA-GFCMDGRDCKYAH---PSFNIPPVDTT 198
>gi|118400634|ref|XP_001032639.1| 50S ribosomal protein [Tetrahymena thermophila]
gi|89286982|gb|EAR84976.1| 50S ribosomal protein [Tetrahymena thermophila SB210]
Length = 1347
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS--CMKGDNCPFDHD 525
K C +YL+G C +GD+CKF H K C+ +N+ C GD C F HD
Sbjct: 100 TKICRYYLQGNCTKGDECKFLHQKDDGEARPKKVCYNFQNTGFCKMGDRCKFSHD 154
>gi|302774735|ref|XP_002970784.1| hypothetical protein SELMODRAFT_441325 [Selaginella moellendorffii]
gi|300161495|gb|EFJ28110.1| hypothetical protein SELMODRAFT_441325 [Selaginella moellendorffii]
Length = 715
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 476 CHHYLKG--RCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--------- 524
C ++L C++G++C+F H + + C ++ SC+ D CPF H
Sbjct: 38 CVYFLASPLTCKKGEECEFRHSEA-ARINPRDCWYWVSGSCLNRD-CPFRHPPLEAGNPT 95
Query: 525 --------DLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSP 573
+ + PC F+ +G+C +GD C F H +P PT +T PEL+ P
Sbjct: 96 PGQQQPASNKGRTPCYFFI-QGYCAKGDRCPFLHGVP-----KPT-TTAPPELEVPP 145
>gi|221059157|ref|XP_002260224.1| zinc finger protein [Plasmodium knowlesi strain H]
gi|193810297|emb|CAQ41491.1| zinc finger protein, putative [Plasmodium knowlesi strain H]
Length = 352
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 479 YLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKG 538
+ KG+C + C +SHD P+ K +K C + +C K +NC F HD + C N V
Sbjct: 83 FRKGKCIHNENCTYSHDVTPIYKISKLCKFLVKGTCEK-ENCIFSHDYKLFFCRNNVIYN 141
Query: 539 FC 540
C
Sbjct: 142 SC 143
>gi|326477709|gb|EGE01719.1| mRNA 3'-end-processing protein yth1 [Trichophyton equinum CBS
127.97]
Length = 251
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 21/106 (19%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-------------VPLTKSTKACCHFARNSCMKGDN 519
V C Y +G C G C H T T + C H+ + C KG
Sbjct: 43 VPVCKAYREGHCPLGPLCAERHPTPSRISTSSSPAIAPSSTHGSLVCKHYLKGLCKKGLK 102
Query: 520 CPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F GFC GD+CL+ H KLP E
Sbjct: 103 CEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCEH 148
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH---DLSKYPC 531
C HYLKG C++G KC++ H+ + C F+RN C GD+C + H D C
Sbjct: 89 CKHYLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQC 146
Query: 532 ENFVAKGFCNRGDNCLFSH---KLPPKEQDP--PTPSTCTPELKPSPPLYASNLLKP 583
E++ +GFC G C H KL P TCT + + P ++ NL KP
Sbjct: 147 EHY-DQGFCPLGPICAKRHVRRKLCRFYLAGFCPAGKTCT---EGAHPRWSENLPKP 199
>gi|241711939|ref|XP_002412070.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215505142|gb|EEC14636.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 281
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C H+L+G C++GD+C+F H+ +TK + C ++R + +CPF H + ++
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-FDMTKMPE-CYFYSRFNACSNKDCPFLHIDPEAKIKDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G NC H
Sbjct: 126 WYDRGFCRHGPNCRHRH 142
>gi|327296479|ref|XP_003232934.1| hypothetical protein TERG_06924 [Trichophyton rubrum CBS 118892]
gi|326465245|gb|EGD90698.1| hypothetical protein TERG_06924 [Trichophyton rubrum CBS 118892]
Length = 251
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 21/106 (19%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-------------VPLTKSTKACCHFARNSCMKGDN 519
V C Y +G C G C H T T + C H+ + C KG
Sbjct: 43 VPVCKAYREGHCPLGPLCAERHPTPSRISTSSSPAIAPSSTHGSLVCKHYLKGLCKKGLK 102
Query: 520 CPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F GFC GD+CL+ H KLP E
Sbjct: 103 CEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCEH 148
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH---DLSKYPC 531
C HYLKG C++G KC++ H+ + C F+RN C GD+C + H D C
Sbjct: 89 CKHYLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQC 146
Query: 532 ENFVAKGFCNRGDNCLFSH---KLPPKEQDP--PTPSTCTPELKPSPPLYASNLLKP 583
E++ +GFC G C H KL P TCT + + P ++ NL KP
Sbjct: 147 EHY-DQGFCPLGPICAKRHVRRKLCRFYLAGFCPAGKTCT---EGAHPRWSENLPKP 199
>gi|302502863|ref|XP_003013392.1| hypothetical protein ARB_00210 [Arthroderma benhamiae CBS 112371]
gi|302657933|ref|XP_003020677.1| hypothetical protein TRV_05203 [Trichophyton verrucosum HKI 0517]
gi|291176956|gb|EFE32752.1| hypothetical protein ARB_00210 [Arthroderma benhamiae CBS 112371]
gi|291184534|gb|EFE40059.1| hypothetical protein TRV_05203 [Trichophyton verrucosum HKI 0517]
Length = 251
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 21/106 (19%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT-------------VPLTKSTKACCHFARNSCMKGDN 519
V C Y +G C G C H T T + C H+ + C KG
Sbjct: 43 VPVCKAYREGHCPLGPLCAERHPTPSRISTSSSPAIAPSSTHGSLVCKHYLKGLCKKGLK 102
Query: 520 CPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
C + H+ L + P C++F GFC GD+CL+ H KLP E
Sbjct: 103 CEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCEH 148
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH---DLSKYPC 531
C HYLKG C++G KC++ H+ + C F+RN C GD+C + H D C
Sbjct: 89 CKHYLKGLCKKGLKCEYLHEYN--LRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQC 146
Query: 532 ENFVAKGFCNRGDNCLFSH---KLPPKEQDP--PTPSTCTPELKPSPPLYASNLLKP 583
E++ +GFC G C H KL P TCT + + P ++ NL KP
Sbjct: 147 EHY-DQGFCPLGPICAKRHVRRKLCRFYLAGFCPAGKTCT---EGAHPRWSENLPKP 199
>gi|389641403|ref|XP_003718334.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae 70-15]
gi|351640887|gb|EHA48750.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae 70-15]
gi|440470731|gb|ELQ39790.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae Y34]
gi|440487615|gb|ELQ67394.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae P131]
Length = 276
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 22/118 (18%)
Query: 466 QNLKPKTVKYCHHYLKG-RCQEGDKCKFSHDTVPLTKSTK-----------------ACC 507
Q+ P C Y G C G +C H P S C
Sbjct: 34 QHSLPSDRPICKVYASGGNCPNGTRCLERHVADPSQLSNAQSGYGSGKRDGPAFNSLVCK 93
Query: 508 HFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
H+ R C KGD C F H+ L + P C ++ G+C G+ CL+ H + P+ + PP P
Sbjct: 94 HWLRGLCKKGDGCEFLHEYNLRRMPECNFYIRNGYCQNGEECLYLH-IDPQSKLPPCP 150
>gi|400595310|gb|EJP63115.1| Zinc finger CCCH type domain containing protein [Beauveria bassiana
ARSEF 2860]
Length = 512
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA----------CCHFARNSCMKGDNCPFDHD 525
C Y G C G +C H T T S+ + C H+ R C KG C F H+
Sbjct: 289 CKAYQTGSCPNGTRCTERHVTDGRTPSSSSHPTGGLNSLVCKHWLRGLCKKGIPCEFLHE 348
Query: 526 --LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
L + P C F+ G+C+ G+ CL+ H + P + PP P
Sbjct: 349 YNLRRMPECNFFMRNGYCSNGEECLYLH-VDPLSKLPPCP 387
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYPCE 532
C H+L+G C++G C+F H+ + C F RN C G+ C + H LSK P
Sbjct: 329 CKHWLRGLCKKGIPCEFLHEYN--LRRMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPC 386
Query: 533 NFVAKGFCNRGDNCLFSH 550
GFC G C H
Sbjct: 387 PHYDMGFCPLGPVCAKKH 404
>gi|302675188|ref|XP_003027278.1| hypothetical protein SCHCODRAFT_83445 [Schizophyllum commune H4-8]
gi|300100964|gb|EFI92375.1| hypothetical protein SCHCODRAFT_83445 [Schizophyllum commune H4-8]
Length = 332
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 80/182 (43%), Gaps = 35/182 (19%)
Query: 398 STVQKEVVKQRVTQEQGITTKDKLDSGACNKRKRSALSKEKKAKKKQKERKKRAEKNRQL 457
+ VQKEV QR+ Q+ K + A K K AL + K+K E K+R E+ L
Sbjct: 29 AKVQKEV--QRIQQQAASAGKSR---AAQEKEKEKAL----REKEKLAEEKRRKEEAALL 79
Query: 458 G-VRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMK 516
V+ K+P + PKTV C Y G C++G+KCKFSH+ K K + +
Sbjct: 80 KPVQTQKVPFGVDPKTV-LCAFYKAGHCEKGNKCKFSHNKDVERKVEKKNLYEDTRGKEE 138
Query: 517 GDNCPFDHD------LSK---------YPCENFVAK------GF---CNRGDNCLFSHKL 552
+D D LSK C+ F+ G+ C G+NC + H L
Sbjct: 139 DTMDKWDDDKLRQVVLSKTGNPRTTTDIVCKYFIEAIESSKYGWFWECPNGENCKYRHAL 198
Query: 553 PP 554
PP
Sbjct: 199 PP 200
>gi|193624968|ref|XP_001945316.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Acyrthosiphon pisum]
Length = 280
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 33/112 (29%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH----------- 524
C H+L+G C++GD+C+F H+ +TK + C +AR + CPF H
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYARFNACHNKECPFLHIDPESKLKDCP 125
Query: 525 ----------------DLSKYPCENFVAKGFCNRGDNCLFSH---KLPPKEQ 557
+ + C N+V+ GFC G NC F H +LP +Q
Sbjct: 126 WYDRGFCRHGPHCKHKHVRRVLCMNYVS-GFCPDGPNCKFVHPRFELPAYQQ 176
Score = 47.8 bits (112), Expect = 0.030, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 462 LKLPQNLKPKTVK-YCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
L LP N K++ C Y KG C +G C H T C H+ R C KGD C
Sbjct: 26 LPLPFNGMDKSIAAVCSFYPKGSCSKGALCPMRHVR---GDRTVVCKHWLRGLCKKGDQC 82
Query: 521 PFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
F H D++K P F A+ C F H P K +D P
Sbjct: 83 EFLHEYDMTKMPECYFYARFNACHNKECPFLHIDPESKLKDCP 125
>gi|348670357|gb|EGZ10179.1| hypothetical protein PHYSODRAFT_338857 [Phytophthora sojae]
Length = 269
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 9/63 (14%)
Query: 472 TVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--------CCHFARN-SCMKGDNCPF 522
TVK C+ +++G C+ GD+C F H +S +A C +FAR +C GD C F
Sbjct: 205 TVKVCYDFMRGECKWGDRCNFEHTETKAMRSGRALDKTRRRVCDNFARTKNCRFGDKCLF 264
Query: 523 DHD 525
HD
Sbjct: 265 SHD 267
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 13/62 (20%)
Query: 502 STKACCHFARNSCMKGDNCPFDHDLSK-------------YPCENFVAKGFCNRGDNCLF 548
+ K C F R C GD C F+H +K C+NF C GD CLF
Sbjct: 205 TVKVCYDFMRGECKWGDRCNFEHTETKAMRSGRALDKTRRRVCDNFARTKNCRFGDKCLF 264
Query: 549 SH 550
SH
Sbjct: 265 SH 266
>gi|119604356|gb|EAW83950.1| makorin, ring finger protein, 1, isoform CRA_b [Homo sapiens]
Length = 258
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKS--TKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S + C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYSVVCKYFQRGYCIYGDRCRYEH 108
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|19113874|ref|NP_592962.1| mRNA cleavage and polyadenylation specificity factor complex Yth1
[Schizosaccharomyces pombe 972h-]
gi|74625941|sp|Q9UTD1.1|YTH1_SCHPO RecName: Full=mRNA 3'-end-processing protein yth1
gi|6455911|emb|CAB61457.1| mRNA cleavage and polyadenylation specificity factor complex Yth1
[Schizosaccharomyces pombe]
Length = 170
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 37/117 (31%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF--ARNSCMKGDNCPFDH-DLSKY--- 529
C H+L+G C++G++C F H+ CHF R C G+ C + H D SK
Sbjct: 54 CKHWLRGLCKKGEQCDFLHE---YNLKKMPPCHFYAERGWCSNGEECLYLHLDPSKQVGV 110
Query: 530 ------------------------PCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
PC ++A GFC G NC +H PK +PP P
Sbjct: 111 CAWYNMGFCPLGPICRGKHVRKPRPCPKYLA-GFCPLGPNCPDAH---PKHSEPPHP 163
>gi|343426595|emb|CBQ70124.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 656
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 473 VKYCHHYL-KGRCQEGDKCKFSH-DTVPLTKSTKACCHFA-RNSCMKGDNCPFDHDLSKY 529
V +C HYL G C+ GD+C ++H D + ST C F+ C +G +C H Y
Sbjct: 385 VPHCVHYLCSGMCRNGDECVYTHSDKLGAGLSTTICREFSDYGWCERGKDCAQRH---TY 441
Query: 530 PCENFVAKGFCNRGDNCLFSHKL 552
C +FV KG C+R C H +
Sbjct: 442 ECPDFVEKGKCDR-KGCKLVHVI 463
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 37/102 (36%), Gaps = 33/102 (32%)
Query: 482 GRCQEGDKCKFSHD---------------------TVPLTKSTKA-----CCHF-ARNSC 514
G+C+ G C + HD T PL+ + +A C H+ C
Sbjct: 338 GQCKRGLSCPYLHDSAKIALCPKVLRPAGCTLPKGTCPLSHTPRAERVPHCVHYLCSGMC 397
Query: 515 MKGDNCPFDHD------LSKYPCENFVAKGFCNRGDNCLFSH 550
GD C + H LS C F G+C RG +C H
Sbjct: 398 RNGDECVYTHSDKLGAGLSTTICREFSDYGWCERGKDCAQRH 439
>gi|403413679|emb|CCM00379.1| predicted protein [Fibroporia radiculosa]
Length = 878
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFA-RNSCMKGDNCPFDHDLSK 528
P + C ++L G C D C+FSHD +A C F R +C KG+NC F H L K
Sbjct: 481 PGGNRVCRYFLAGECLRAD-CRFSHDL------ERALCRFWLRGTCAKGENCEFLHHLPK 533
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 496 TVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLP 553
TVP + C +F C++ D C F HDL + C F +G C +G+NC F H LP
Sbjct: 479 TVP--GGNRVCRYFLAGECLRAD-CRFSHDLERALCR-FWLRGTCAKGENCEFLHHLP 532
>gi|303274592|ref|XP_003056614.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462698|gb|EEH59990.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 195
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C H+L+G C +G+ C F H + C FA+ S K +CPF H L N
Sbjct: 41 CRHWLRGLCMKGNHCGFLHQFD--KQRMPTCRFFAKYSECKEPDCPFKHSLEDVKDCNMF 98
Query: 536 AKGFCNRGDNCLFSH 550
GFC G NC + H
Sbjct: 99 KLGFCIHGPNCRYRH 113
>gi|146423357|ref|XP_001487608.1| hypothetical protein PGUG_00985 [Meyerozyma guilliermondii ATCC
6260]
Length = 199
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 482 GRCQEGDKCKFSHDTVPLTKSTKACC-HFARNSCMKGDNCPFDHD--LSKYP-CENFVAK 537
G C G+ C H VP S K C H+ R C K D+C F H+ L K P C +
Sbjct: 47 GSCPNGNNCPNKH--VPTMYSNKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFYSKN 104
Query: 538 GFCNRGDNCLFSHKLPPKEQDPPTPS---TCTPELKPSPPLYASNLLKPL 584
GFC + CL+ H + P+ + P P+ PE P + ++ PL
Sbjct: 105 GFCTQTPECLYLH-VDPQLKIPACPNYEKGFCPEGPKCPNRHVRKIMCPL 153
Score = 41.6 bits (96), Expect = 2.1, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH---DLSKYPC 531
C H+L+G C++ D C+F H+ + C +++N C + C + H L C
Sbjct: 70 CKHWLRGLCKKNDHCEFLHEYN--LRKMPECLFYSKNGFCTQTPECLYLHVDPQLKIPAC 127
Query: 532 ENFVAKGFCNRGDNCLFSH 550
N+ KGFC G C H
Sbjct: 128 PNY-EKGFCPEGPKCPNRH 145
>gi|452979502|gb|EME79264.1| hypothetical protein MYCFIDRAFT_23302, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 136
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNC-----PFDHDLSKY 529
C HY +G C++GD C+F+H T L + K C F+R C +GD+C P +L +
Sbjct: 40 CKHYQRGLCKKGDTCEFAH-TFNL-RDEKECKEFSRYGICSQGDDCTSLHIPPTSELRRP 97
Query: 530 PCENFVAKGFCNRGDNCLFSH 550
C ++ A+GFC G C H
Sbjct: 98 ACSHY-ARGFCPLGPYCNQRH 117
Score = 48.5 bits (114), Expect = 0.016, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 483 RCQEGDKCKFSHDTVPLTKSTKA---CCHFARNSCMKGDNCPFDHDLS---KYPCENFVA 536
+C G C H P +S C H+ R C KGD C F H + + C+ F
Sbjct: 14 QCPRGPHCPDRHYVPPSERSGIGHLICKHYQRGLCKKGDTCEFAHTFNLRDEKECKEFSR 73
Query: 537 KGFCNRGDNCLFSHKLPPKEQDPPTPS 563
G C++GD+C H P E P S
Sbjct: 74 YGICSQGDDCTSLHIPPTSELRRPACS 100
>gi|390176610|ref|XP_001356742.2| GA17582 [Drosophila pseudoobscura pseudoobscura]
gi|388858696|gb|EAL33807.2| GA17582 [Drosophila pseudoobscura pseudoobscura]
Length = 282
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 41/161 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------STKACCH 508
C H+L+G C++GD+C+F H+ +TK K C
Sbjct: 70 CKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPW 128
Query: 509 FARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPE 568
+ R C G +C H L + C N++A GFC G NC H P+ + PP +
Sbjct: 129 YKRGFCRHGPHCRHQH-LRRVLCMNYLA-GFCPEGPNCKHMH---PRFELPPLADLSKDQ 183
Query: 569 LKPSPPL--------YASNLLKPLNNNKVSHQNVDALSNHG 601
L P + +N K + + N++A+ + G
Sbjct: 184 LHKKLPTCHYCGELGHKANSCKQYAGSLENRNNINAMDHSG 224
>gi|321454580|gb|EFX65745.1| hypothetical protein DAPPUDRAFT_303546 [Daphnia pulex]
Length = 929
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C Y++G+C G+ C +SH +P K + C + + C K + C + H +PC+ F
Sbjct: 251 CAFYMEGKCSRGNDCPYSHAALPPRK-MELCKFYLMDCCAKKEKCLYLH--KDFPCKFFH 307
Query: 536 AKGFC-NRGDNCLFSHK 551
C + + C FSH+
Sbjct: 308 TGKKCRHSAEECKFSHE 324
>gi|302414184|ref|XP_003004924.1| CCCH zinc finger protein [Verticillium albo-atrum VaMs.102]
gi|261355993|gb|EEY18421.1| CCCH zinc finger protein [Verticillium albo-atrum VaMs.102]
Length = 441
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 473 VKYCHHYL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD---LSK 528
V C +L KG+C G+ C SHD P + T C HF + +C + CP+ H+
Sbjct: 281 VAVCRDFLQKGKCANGEDCDLSHDLCP--QRTPTCLHFIKGNCANHE-CPYAHNNVSPGA 337
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
C F GFC G C H
Sbjct: 338 LVCRPFGLYGFCEAGQECTERH 359
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 513 SCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPPK 555
SC KG C + HD SK C +F+ KG C G++C SH L P+
Sbjct: 265 SCPKGPTCRYIHDASKVAVCRDFLQKGKCANGEDCDLSHDLCPQ 308
>gi|296412809|ref|XP_002836112.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629918|emb|CAZ80303.1| unnamed protein product [Tuber melanosporum]
Length = 236
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C +++G C G+ C H V + + C H+ R+ C KG+ C F H+ C FV
Sbjct: 53 CPLFVQGHCPMGNSCPDKH-AVSSSFNNLVCKHWLRSLCKKGEACEFLHERKMPECNFFV 111
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTP 562
G+C+ G+ CL+ H + P + PP P
Sbjct: 112 RNGYCSNGEECLYLH-VDPDSKIPPCP 137
>gi|52076625|dbj|BAD45526.1| zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa
Japonica Group]
gi|52076911|dbj|BAD45923.1| zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa
Japonica Group]
Length = 678
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN--SCMKGDNCPFDHDLSKYPCEN 533
C H+L+G C +G+ C F H K+ C F R+ C + D C + H N
Sbjct: 64 CRHWLRGLCMKGEACGFLHQ---FDKARMPVCRFFRDFGECREPD-CAYKHSYDDVKECN 119
Query: 534 FVAKGFCNRGDNCLFSH 550
GFC G NC + H
Sbjct: 120 MYKMGFCPNGPNCRYKH 136
>gi|325182946|emb|CCA17401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 772
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C H+L+G C +GD C+F H S C + + CPF H D + C
Sbjct: 64 CRHWLRGLCMKGDSCEFLHQ---YDMSKMPECRWGMEC--QVPECPFRHVPDEDRMECA- 117
Query: 534 FVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
F +GFC+ G NC + H +E+ P T
Sbjct: 118 FYRQGFCSHGPNCRYRHIKLAREECPET 145
>gi|409040902|gb|EKM50388.1| hypothetical protein PHACADRAFT_152320 [Phanerochaete carnosa
HHB-10118-sp]
Length = 884
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFA-RNSCMKGDNCPFDHDLSK 528
P + C ++L G C D C+FSHD +A C F R +C KG+NC F H L K
Sbjct: 485 PGGNRVCRYFLAGECLRAD-CRFSHDL------ERALCRFWLRGTCAKGENCEFLHHLPK 537
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLP 553
+ C +F C++ D C F HDL + C F +G C +G+NC F H LP
Sbjct: 489 RVCRYFLAGECLRAD-CRFSHDLERALCR-FWLRGTCAKGENCEFLHHLP 536
>gi|119597072|gb|EAW76666.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_e [Homo sapiens]
Length = 229
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 450 RAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF 509
R+ R G RL K C +LK C +G C F H + + T C H+
Sbjct: 80 RSSLPRIFGPLRL-----FKESGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHW 131
Query: 510 ARNSCMKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
R C KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 132 LRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 185
Score = 45.4 bits (106), Expect = 0.14, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 124 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 180
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 181 IKDCPWYDRGFCKHGPLCRHRH 202
>gi|395331784|gb|EJF64164.1| hypothetical protein DICSQDRAFT_167340 [Dichomitus squalens
LYAD-421 SS1]
Length = 902
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 498 PLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLP 553
P+ + C +F C++ D C F HDL + C F +G C +G+NC F H LP
Sbjct: 502 PVQGGNRVCRYFLAGECLRAD-CRFSHDLERALCR-FWLRGTCAKGENCEFLHHLP 555
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFA-RNSCMKGDNCPFDHDLSK 528
+ C ++L G C D C+FSHD +A C F R +C KG+NC F H L +
Sbjct: 508 RVCRYFLAGECLRAD-CRFSHDL------ERALCRFWLRGTCAKGENCEFLHHLPQ 556
>gi|115469520|ref|NP_001058359.1| Os06g0677700 [Oryza sativa Japonica Group]
gi|122167909|sp|Q0DA50.1|C3H45_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 45;
Short=OsC3H45
gi|113596399|dbj|BAF20273.1| Os06g0677700 [Oryza sativa Japonica Group]
Length = 665
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN--SCMKGDNCPFDHDLSKYPCEN 533
C H+L+G C +G+ C F H K+ C F R+ C + D C + H N
Sbjct: 64 CRHWLRGLCMKGEACGFLHQ---FDKARMPVCRFFRDFGECREPD-CAYKHSYDDVKECN 119
Query: 534 FVAKGFCNRGDNCLFSH 550
GFC G NC + H
Sbjct: 120 MYKMGFCPNGPNCRYKH 136
>gi|366988641|ref|XP_003674087.1| hypothetical protein NCAS_0A11480 [Naumovozyma castellii CBS 4309]
gi|342299950|emb|CCC67706.1| hypothetical protein NCAS_0A11480 [Naumovozyma castellii CBS 4309]
Length = 215
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D+C+F H+ + C F++N C +G CP+ H SK P C
Sbjct: 68 CKHWLRGLCKKNDQCEFLHEYN--LRKMPECVFFSKNGYCTQGAECPYLHIDPQSKIPNC 125
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ GFC G C H
Sbjct: 126 EDY-DLGFCPLGQECKRKH 143
>gi|345313743|ref|XP_003429427.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like,
partial [Ornithorhynchus anatinus]
Length = 87
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 487 GDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNC 546
G++CKF H+ L K + C + + C +G+NC + H+ ++PC+ + + C +GD C
Sbjct: 1 GEQCKFEHEG-ELEKRKEICKFYIQGYCNRGENCRYMHN--EFPCKFYHTRTKCYQGDKC 57
Query: 547 LFSH 550
FSH
Sbjct: 58 KFSH 61
Score = 44.3 bits (103), Expect = 0.31, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF--ARNSCMKGDNCPFDHDLSK 528
K + C Y++G C G+ C++ H+ P C F R C +GD C F H
Sbjct: 14 KRKEICKFYIQGYCNRGENCRYMHNEFP--------CKFYHTRTKCYQGDKCKFSHAPLT 65
Query: 529 YPCENFVAK-GFCNR 542
E + K GFC++
Sbjct: 66 EETEELLDKEGFCSK 80
>gi|346974913|gb|EGY18365.1| CCCH zinc finger protein [Verticillium dahliae VdLs.17]
Length = 449
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 473 VKYCHHYL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD---LSK 528
V C +L KG+C G+ C SHD P + T C HF + +C + CP+ H+
Sbjct: 288 VAVCRDFLQKGKCANGEDCDLSHDLCP--QRTPTCLHFIKGNCANHE-CPYAHNNVSPGA 344
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
C F GFC G C H
Sbjct: 345 LVCRPFGLYGFCEAGQECTERH 366
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 513 SCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
SC KG NC + H+ SK C +F+ KG C G++C SH L P Q PT
Sbjct: 272 SCPKGPNCRYIHNASKVAVCRDFLQKGKCANGEDCDLSHDLCP--QRTPT 319
>gi|320592591|gb|EFX05021.1| hypothetical protein CMQ_5283 [Grosmannia clavigera kw1407]
Length = 740
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 461 RLKLPQNLKPKTVK-YCHHYLKGRCQEGDKCKFSHD----TVPLTKSTKACCHFARNSCM 515
R ++ Q+++P V+ C +Y +G C G C+FSH+ +P ++ C FAR C
Sbjct: 44 RERVHQHIRPTPVRPQCTYYNRGNCLRGMTCRFSHEGTPQQLPAIRAQNPCHFFARGRCR 103
Query: 516 KGDNCPFDHD 525
G C F H+
Sbjct: 104 NGATCRFSHN 113
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 494 HDTVPLTKSTKACCHFARNSCMKGDNCPFDHD---------LSKYPCENFVAKGFCNRGD 544
H + T C ++ R +C++G C F H+ ++ PC +F A+G C G
Sbjct: 48 HQHIRPTPVRPQCTYYNRGNCLRGMTCRFSHEGTPQQLPAIRAQNPC-HFFARGRCRNGA 106
Query: 545 NCLFSH 550
C FSH
Sbjct: 107 TCRFSH 112
>gi|302923751|ref|XP_003053742.1| hypothetical protein NECHADRAFT_75190 [Nectria haematococca mpVI
77-13-4]
gi|256734683|gb|EEU48029.1| hypothetical protein NECHADRAFT_75190 [Nectria haematococca mpVI
77-13-4]
Length = 258
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK------STKACCHFARNSCMKGDNCPFD 523
P C + G C G +C H + T ++ C H+ R C KG++C F
Sbjct: 37 PPDRPICKAFQSGHCPNGTRCSERHVSDAKTAQPTGGLNSLVCKHWLRGLCKKGEHCEFL 96
Query: 524 HD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
H+ L K P C F+ G+C+ GD CL+ H + P+ + PP P
Sbjct: 97 HEYNLRKMPECNFFMRNGYCSNGDECLYLH-IDPQSRLPPCP 137
>gi|449482071|ref|XP_002197651.2| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Taeniopygia
guttata]
Length = 488
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 456 QLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCM 515
Q + L +N+ K Y +++ G C+EGD C++SHD + ++S C ++ R C
Sbjct: 2 QFNILSYFLVRNINLKDTGY-KYFMHGVCKEGDNCRYSHD-LSTSQSAMVCRYYQRGCCA 59
Query: 516 KGDNCPFDH 524
GD+C ++H
Sbjct: 60 YGDHCRYEH 68
>gi|345566349|gb|EGX49292.1| hypothetical protein AOL_s00078g325 [Arthrobotrys oligospora ATCC
24927]
Length = 208
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 453 KNRQLG--VRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFA 510
K LG VR P P V C +L+ C +GD C SH +P AC HF
Sbjct: 9 KKLYLGKCVRGNTCPYVHDPDRVAICPKFLQNNCSDGDSCDLSH--IPNPHRVPACLHFL 66
Query: 511 RNSCMKGDNCPFDH---DLSKYPCENFVAKGFCNRGDNCLFSH 550
R +C ++C + H + S C F +G+C++G +CL H
Sbjct: 67 RGNC-SNESCKYAHVRVNPSAPICRPFAKEGYCDKGADCLDKH 108
>gi|307174929|gb|EFN65169.1| Zinc finger CCCH domain-containing protein 3 [Camponotus
floridanus]
Length = 666
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 464 LPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
L ++ P+ + C ++L G C D C + H V ++ +T C F + C+KG C
Sbjct: 478 LSHDVGPEKMPTCKYFLDGCCTRDD-CPYLH--VKVSSNTSICIDFLQGYCVKGTKCQRR 534
Query: 524 HDLSKYPCENFVAKGFCNRGDNCLFSHK 551
H+ Y C F G C++G+ C + HK
Sbjct: 535 HE---YLCPEFNKSGNCSKGECCPYPHK 559
>gi|256088194|ref|XP_002580237.1| hypothetical protein [Schistosoma mansoni]
gi|353228956|emb|CCD75127.1| hypothetical protein Smp_172780 [Schistosoma mansoni]
Length = 872
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHD--------- 525
C++Y G C+ G++C F+H V C FA + C G NC F HD
Sbjct: 30 CYYYQAGCCRNGNECTFTHPKV-------RCRTFASDGWCPYGYNCHFWHDPSVKPNVVN 82
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSHKL 552
L K PC F A C GD C FSH +
Sbjct: 83 LIKKPCL-FYANNQCKYGDKCSFSHDI 108
>gi|308451557|ref|XP_003088717.1| hypothetical protein CRE_02761 [Caenorhabditis remanei]
gi|308246012|gb|EFO89964.1| hypothetical protein CRE_02761 [Caenorhabditis remanei]
Length = 580
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C + +G C++GD C +SH + C +A + C KG C H ++PC+++
Sbjct: 180 CKFFREGYCRDGDNCSYSHQAEDSLRRPVLCNFYANSYCKKGLQCLMLH--GEFPCKDYH 237
Query: 536 AKGFCNRGDNCLFSH 550
+ N DNC FSH
Sbjct: 238 RQKCFN--DNCRFSH 250
>gi|297743876|emb|CBI36846.3| unnamed protein product [Vitis vinifera]
Length = 1007
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS----KYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
C F SC +G+ CPF H L K P C+ F + C GD+C FSH L P +
Sbjct: 722 CRFFVNGSCNRGNKCPFSHSLPVNEVKGPTCKFFFSLQGCRNGDSCFFSHDLDPSVSEFS 781
Query: 561 TPSTCTPE 568
C PE
Sbjct: 782 GSGECLPE 789
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACC--HFARNSCMKGDNCPFDHDL 526
C ++ G C G+KC FSH ++P+ + C F+ C GD+C F HDL
Sbjct: 722 CRFFVNGSCNRGNKCPFSH-SLPVNEVKGPTCKFFFSLQGCRNGDSCFFSHDL 773
>gi|293352395|ref|XP_002727980.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Rattus norvegicus]
Length = 243
Score = 49.7 bits (117), Expect = 0.008, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P K T C +LK C + C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFPGMDKSGTA-VCEFFLKAACGKVHMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 42.0 bits (97), Expect = 1.7, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 29/106 (27%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK-------------STKACCHFARNSCMKG 517
KTV C H+L+G C++GD+C+F H+ +TK S K C + K
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPESKI 121
Query: 518 DNCP-FDHDLSKYP------------CENFVAKGFCNRGDNCLFSH 550
+CP +D K+ C N++ GFC G +C F H
Sbjct: 122 KDCPWYDRGFCKHGPLCRHRRTRRVICVNYLV-GFCPEGPSCKFMH 166
>gi|268536646|ref|XP_002633458.1| Hypothetical protein CBG06226 [Caenorhabditis briggsae]
Length = 768
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH-----DLSKYP 530
C H+L+G C++GD+C+F H+ LTK + C F++ S CPF H L P
Sbjct: 82 CKHWLRGLCKKGDQCEFLHE-YDLTKMPE-CFFFSKYSACSNRECPFRHIDPETKLKDCP 139
Query: 531 CENFVAKGFCNRGDNCLFSHK 551
+ +GFC G C H+
Sbjct: 140 ---WYDRGFCRHGPYCKHRHR 157
>gi|328701067|ref|XP_001949036.2| PREDICTED: hypothetical protein LOC100162254 [Acyrthosiphon pisum]
Length = 715
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 464 LPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
L N+ + + +C HYL C + + C F H+ +K+T C +F SC G CP
Sbjct: 578 LSHNIVEEKIPFCKHYLNSVCVQLN-CPFLHEY--RSKNTPICKNFLHGSCNWGKKCPKK 634
Query: 524 H-DLSKYPCENFVAKGFCNRGDNCLFSH 550
H DL C F K C G CL+ H
Sbjct: 635 HLDL----CPIFETKNECPHGQKCLYPH 658
>gi|359479904|ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
vinifera]
Length = 1014
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS----KYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
C F SC +G+ CPF H L K P C+ F + C GD+C FSH L P +
Sbjct: 729 CRFFVNGSCNRGNKCPFSHSLPVNEVKGPTCKFFFSLQGCRNGDSCFFSHDLDPSVSEFS 788
Query: 561 TPSTCTPE 568
C PE
Sbjct: 789 GSGECLPE 796
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACC--HFARNSCMKGDNCPFDHDL 526
C ++ G C G+KC FSH ++P+ + C F+ C GD+C F HDL
Sbjct: 729 CRFFVNGSCNRGNKCPFSH-SLPVNEVKGPTCKFFFSLQGCRNGDSCFFSHDL 780
>gi|119180084|ref|XP_001241549.1| hypothetical protein CIMG_08712 [Coccidioides immitis RS]
Length = 473
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G+C G C SH+ P + + AC HF R C C + H +
Sbjct: 291 PNKVAICKEFLQTGKCSAGPSCDLSHEPSP--ERSPACVHFIRGRC-SNPACRYAH-IRV 346
Query: 529 YP----CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPL 584
P C +F G+C++GD C H + + D C + P P + + ++ L
Sbjct: 347 TPGAPVCRDFAILGYCSKGDQCQDRHVI--ECPDYANMGKCAKQKCPLPHIDRAGQIRKL 404
Query: 585 NNNKVSHQNVDALSNHGKVS 604
NK + N A N G+ +
Sbjct: 405 AANKADN-NTHATENPGEYA 423
>gi|406602937|emb|CCH45493.1| Poly [ADP-ribose] polymerase 12 [Wickerhamomyces ciferrii]
Length = 524
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 501 KSTKACCHFA--RNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQD 558
K KA C F C++ D C F HD+ + C +F KG C GD CLF H L D
Sbjct: 230 KKNKALCSFLIKNGQCLRSD-CKFSHDIDQRAC-SFWLKGNCLAGDKCLFKHDL-----D 282
Query: 559 PPTPSTCTPELKP----SPPLYASNLLKPLNNNKVSHQNVDALSNHGKVSSFKNIEQSVA 614
PTP + L +PP +++K ++ + N+ ++ + +S S A
Sbjct: 283 LPTPLSPPESLASLSTLTPPSSQPSIIKQSPSSSFTASNISSVPSFIPSTSAPPFIPSKA 342
Query: 615 KSILKP---PALAP 625
I+KP P + P
Sbjct: 343 IKIVKPIKKPTIIP 356
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
C +K G+C D CKFSHD +AC + + +C+ GD C F HDL
Sbjct: 236 CSFLIKNGQCLRSD-CKFSHDI-----DQRACSFWLKGNCLAGDKCLFKHDL 281
>gi|301113866|ref|XP_002998703.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112004|gb|EEY70056.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 269
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 17/79 (21%)
Query: 472 TVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPC 531
TVK C+ +++G C+ GD+C F H KS +A D + C
Sbjct: 204 TVKVCYDFMRGECKWGDRCNFEHTETKAMKSGRA----------------LD-KARRRVC 246
Query: 532 ENFVAKGFCNRGDNCLFSH 550
+NF+ C GD CL+SH
Sbjct: 247 DNFIRTKNCRFGDKCLYSH 265
>gi|63054460|ref|NP_588409.2| zf-CCCH type zinc finger protein [Schizosaccharomyces pombe 972h-]
gi|48474269|sp|O74463.2|YQC1_SCHPO RecName: Full=Uncharacterized protein C1739.01
gi|157310530|emb|CAA20774.2| zf-CCCH type zinc finger protein [Schizosaccharomyces pombe]
Length = 547
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 507 CHFARN-SCMKGDNCPFDHDL-SKYPCENFVAKGFCNRGDNCLFSHKLP 553
C F RN +C G+NCPF H L ++ P + KG C G C SH LP
Sbjct: 47 CKFFRNGTCTAGENCPFSHSLETERPICKYFLKGNCKFGPKCALSHALP 95
>gi|392866572|gb|EAS27801.2| CCCH zinc finger protein [Coccidioides immitis RS]
Length = 456
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G+C G C SH+ P + + AC HF R C C + H +
Sbjct: 274 PNKVAICKEFLQTGKCSAGPSCDLSHEPSP--ERSPACVHFIRGRC-SNPACRYAH-IRV 329
Query: 529 YP----CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPL 584
P C +F G+C++GD C H + + D C + P P + + ++ L
Sbjct: 330 TPGAPVCRDFAILGYCSKGDQCQDRHVI--ECPDYANMGKCAKQKCPLPHIDRAGQIRKL 387
Query: 585 NNNKVSHQNVDALSNHGKVS 604
NK + N A N G+ +
Sbjct: 388 AANKADN-NTHATENPGEYA 406
>gi|388856515|emb|CCF49821.1| uncharacterized protein [Ustilago hordei]
Length = 681
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 464 LPQNLKPKTVKYCHHYLK-GRCQEGDKCKFSH-DTVPLTKSTKACCHFA-RNSCMKGDNC 520
L + + V +C HYL+ G+C+ G +C ++H D + TK C +F+ C +G +C
Sbjct: 380 LSHTPRAERVPHCVHYLRAGKCRNGKQCFYTHSDKLKDGTGTKICRNFSDYGWCERGKDC 439
Query: 521 PFDHDLSKYPCENFVAKGFCNRGDNCLFSHKL 552
H Y C +FV KG C R C H +
Sbjct: 440 EERH---TYECPDFVEKGKCER-KGCKLVHVI 467
>gi|392587823|gb|EIW77156.1| hypothetical protein CONPUDRAFT_84352 [Coniophora puteana
RWD-64-598 SS2]
Length = 1082
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS----KYP- 530
C +LKGRC + C+ H + P C + C + + CP H++ KYP
Sbjct: 287 CWLFLKGRCPY-NPCERLHVSAP----PHVCKDWLFGLCER-NPCPRKHEMPDKNVKYPH 340
Query: 531 -CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSP 573
C ++ +G C+R C F H+LP KEQ P+P + + +KP P
Sbjct: 341 VCNLWLRRGVCDR-QVCYFQHELPAKEQKLPSPDS-SIAVKPDP 382
>gi|23308621|ref|NP_694511.1| probable E3 ubiquitin-protein ligase makorin-2 [Danio rerio]
gi|11037480|gb|AAG27597.1|AF277172_1 Makorin RING zinc-finger protein 2 [Danio rerio]
Length = 414
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG +C FSHD + +K + C ++ R +C GD C +DH
Sbjct: 8 CRYFLHGVCREGSRCLFSHD-LTTSKPSTICKYYQRGACAYGDRCRYDH 55
>gi|325191371|emb|CCA26150.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 492
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHK 551
K K C F +N C GD+C + H+ +++PC++ K C +GD C FSH+
Sbjct: 353 KQPKLCRKFCKNQCRFGDSCRYSHNRAEFPCKSVELKRPCRKGDACPFSHE 403
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPL-TKSTKACCHFARNSCMKGDNCPFDHD 525
K K K C + K +C+ GD C++SH+ KS + + C KGD CPF H+
Sbjct: 351 KQKQPKLCRKFCKNQCRFGDSCRYSHNRAEFPCKSVE-----LKRPCRKGDACPFSHE 403
>gi|409081483|gb|EKM81842.1| hypothetical protein AGABI1DRAFT_126200 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1924
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 500 TKSTK-ACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCN 541
T+STK C F + +C G+NCP+ HD + PC N + G+CN
Sbjct: 729 TQSTKRICAFFLKGTCKNGENCPYYHDTASVPCPNIQSHGYCN 771
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 472 TVKYCHHYLKGRCQEGDKCKFSHDTV----PLTKSTKAC----CHFARNSCMKGDNCPFD 523
T + C +LKG C+ G+ C + HDT P +S C C + + +
Sbjct: 732 TKRICAFFLKGTCKNGENCPYYHDTASVPCPNIQSHGYCNNVGCSYCSTDKQQSTSERAF 791
Query: 524 HDLSKYPCENFVAKGFCNRGDNCLFSH 550
S PC+ + G C GD+C F+H
Sbjct: 792 PAPSAKPCQ-YWPMGTCRNGDSCGFAH 817
>gi|406859154|gb|EKD12223.1| CCCH finger DNA binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 365
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 35/163 (21%)
Query: 424 GACNKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGR 483
G ++KR+A E++ K E+ ++ E V+ K+P + PKTV C + KG
Sbjct: 51 GTPEEKKRAAEKAERERMKAATEKAQKEEAELFKPVQVQKVPFGVDPKTV-LCQFFKKGH 109
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCH-------FARNSCMKGDNCPFDHD------LSKYP 530
C++G KCKFSHD KS K + + DN +D + LSK
Sbjct: 110 CEKGRKCKFSHDLNVERKSVKKDLYQDTREDEEEKKKKETSDN--WDEEKLRQVVLSKKG 167
Query: 531 ---------CENFV------AKGF---C-NRGDNCLFSHKLPP 554
C+ F+ G+ C N GD C++ HKLPP
Sbjct: 168 NQKTTTDKVCKFFIDAVEEGKYGWFWTCPNGGDTCMYQHKLPP 210
>gi|37665522|dbj|BAC99018.1| Makorin1 [Seriola quinqueradiata]
Length = 418
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + C F + +C+ GD C F+H
Sbjct: 7 CRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKGNCVFGDRCRFEH 55
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS-----KYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
C +F C +GDNC + HDL+ C+ F KG C GD C F H P K ++ P
Sbjct: 7 CRYFMHGLCKEGDNCRYSHDLTNSKPAAMICK-FFQKGNCVFGDRCRFEHCKPAKNEELP 65
Query: 561 TP 562
P
Sbjct: 66 AP 67
>gi|221222463|sp|Q9DFG8.2|MKRN2_DANRE RecName: Full=Probable E3 ubiquitin-protein ligase makorin-2
Length = 414
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG +C FSHD + +K + C ++ R +C GD C +DH
Sbjct: 8 CRYFLHGVCREGSRCLFSHD-LTTSKPSTICKYYQRGACAYGDRCRYDH 55
>gi|425768612|gb|EKV07130.1| hypothetical protein PDIG_74040 [Penicillium digitatum PHI26]
gi|425776037|gb|EKV14275.1| hypothetical protein PDIP_44520 [Penicillium digitatum Pd1]
Length = 739
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS 527
C ++L G+C D C+FSHD +T C ++ +C+ GD CPF HD S
Sbjct: 284 CKYWLSTGQCLRAD-CRFSHDL-----TTHVCKYWVMGNCLAGDGCPFSHDPS 330
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 86/211 (40%), Gaps = 44/211 (20%)
Query: 500 TKSTKACCHF-ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQD 558
++S C ++ + C++ D C F HDL+ + C+ +V G C GD C FSH
Sbjct: 278 SRSPVVCKYWLSTGQCLRAD-CRFSHDLTTHVCKYWVM-GNCLAGDGCPFSHD------- 328
Query: 559 PPTPSTCTPEL------KP-SPPLY----ASNLLKPLNNNKVSHQNVDALSNH--GKVSS 605
PS L +P SP L+ S+ PL + N D N G+ S
Sbjct: 329 ---PSALIGNLSVTDSSRPASPSLFQVDSGSDAFPPLQ----AADNGDQWPNQYTGRYPS 381
Query: 606 FKNIEQSVAKSILKPPALAPKGISYLFLGKSSFLEASNLGQGISSPKKSDSSKFANQTAQ 665
+ Q+ S PP L P +GK + A++LG+ S P SS+ N+
Sbjct: 382 HLSAYQA---SKYAPPGLLPG------VGKRNG-SATHLGRPSSRP----SSRHQNRELN 427
Query: 666 IASDSVQSRDETPRRIPVATKGVNFLSFGNR 696
A+ SV D P V K V G R
Sbjct: 428 PAAPSVDDPDAFPTLAAVNAKNVGKKHHGKR 458
>gi|40807149|gb|AAH65352.1| Mkrn2 protein [Danio rerio]
Length = 414
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG +C FSHD + +K + C ++ R +C GD C +DH
Sbjct: 8 CRYFLHGVCREGSRCLFSHD-LTTSKPSTICKYYQRGACAYGDRCRYDH 55
>gi|242056885|ref|XP_002457588.1| hypothetical protein SORBIDRAFT_03g009880 [Sorghum bicolor]
gi|241929563|gb|EES02708.1| hypothetical protein SORBIDRAFT_03g009880 [Sorghum bicolor]
Length = 986
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 500 TKSTKACCHFARNSCMKGDNCPFDH-DLSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQ 557
T T+AC FA SC G C F H L+ P C+ ++ C G++C +SH K
Sbjct: 702 TLGTEACVFFANGSCNLGAACRFSHSSLAPKPVCKFYLTLQGCRSGNSCPYSHDFGSKVS 761
Query: 558 DPPTPSTCTPELKPSPPLYASNLLKPLNNNKVSHQNVDALSNHGKVSSFKNIEQSVAKSI 617
P T C+ E + + L + LL + + N L K+S F ++ + VA +
Sbjct: 762 APVTSGICSQEGRAT-SLCCTRLLPADGDGYILVMNDKTLEFSSKLSQFYDVCKIVAGT- 819
Query: 618 LKPPAL-------APKGISYL 631
P L PKG+ L
Sbjct: 820 ---PGLQSVESYSVPKGLKIL 837
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 463 KLPQNLKPKT-VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF--ARNSCMKGDN 519
+L N+KP + C + G C G C+FSH ++ + K C F C G++
Sbjct: 694 QLRSNVKPTLGTEACVFFANGSCNLGAACRFSHSSL----APKPVCKFYLTLQGCRSGNS 749
Query: 520 CPFDHDL 526
CP+ HD
Sbjct: 750 CPYSHDF 756
>gi|66362664|ref|XP_628298.1| 3CCCH domain containing protein [Cryptosporidium parvum Iowa II]
gi|46229863|gb|EAK90681.1| 3CCCH domain containing protein [Cryptosporidium parvum Iowa II]
Length = 591
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPL-----TKSTKACCHFARNSCMKGDNCPFDHDLS 527
K C + KG C+ GD C+F+H + L K TK C + ++C G+NCPF H +
Sbjct: 95 TKLCLMFSKGACKNGDNCRFAHGSEDLRTPVNLKKTKLCPFWLSSACSIGENCPFAHGTT 154
Query: 528 KYPCEN-FVAKGFC 540
+ N F C
Sbjct: 155 ELRVTNDFYKTSVC 168
>gi|426196722|gb|EKV46650.1| hypothetical protein AGABI2DRAFT_118828 [Agaricus bisporus var.
bisporus H97]
Length = 1910
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 500 TKSTK-ACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCN 541
T+STK C F + +C G+NCP+ HD + PC N + G+CN
Sbjct: 710 TQSTKRICAFFLKGTCKNGENCPYYHDTASVPCPNIQSHGYCN 752
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 472 TVKYCHHYLKGRCQEGDKCKFSHDTV----PLTKSTKAC----CHFARNSCMKGDNCPFD 523
T + C +LKG C+ G+ C + HDT P +S C C + + +
Sbjct: 713 TKRICAFFLKGTCKNGENCPYYHDTASVPCPNIQSHGYCNNVGCSYCSTDKHQSTSERAF 772
Query: 524 HDLSKYPCENFVAKGFCNRGDNCLFSH 550
S PC+ + G C GD+C F+H
Sbjct: 773 PAPSAKPCQ-YWPMGTCRNGDSCGFAH 798
>gi|430810962|emb|CCJ31506.1| unnamed protein product [Pneumocystis jirovecii]
Length = 250
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 480 LKGRCQEGDKCK----FSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CE 532
+KG C G+ C FS D ++ C H+ R C KGD C F H+ L K P C
Sbjct: 42 VKGHCPLGNACPDKHFFSKDGTSGRSNSIVCKHWLRGLCKKGDQCEFLHEYNLKKMPECR 101
Query: 533 NFVAKGFCNRGDNCLFSHKLP 553
F GFC+ G+ CL+ H P
Sbjct: 102 FFAKHGFCSNGEECLYLHIDP 122
>gi|71896131|ref|NP_001026756.1| zinc finger CCCH domain-containing protein 3 [Gallus gallus]
gi|60098725|emb|CAH65193.1| hypothetical protein RCJMB04_7c5 [Gallus gallus]
Length = 956
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C + C +SH V +++ + C F + C G+ C H L C +F
Sbjct: 750 CSYFLKGICNNSN-CPYSH--VYVSRKAEVCQDFLKGYCPMGEKCKKKHTLV---CPDFA 803
Query: 536 AKGFCNRGDNCLFSH 550
KG C RG C H
Sbjct: 804 KKGICPRGACCKLLH 818
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 506 CCHFAR-NSCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDN-CLFSHKL 552
C ++ R C +G+NCP+ HD K C F+ +G C + D C FSHK+
Sbjct: 694 CMYYNRFGKCNRGENCPYIHDPEKVAVCTRFL-RGTCKKTDGKCPFSHKV 742
>gi|410931247|ref|XP_003979007.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Takifugu rubripes]
Length = 248
Score = 49.3 bits (116), Expect = 0.010, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P K + C +++ C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFPGMDKSGSA-VCEFFMRAACMKGAMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 45.4 bits (106), Expect = 0.13, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 35/123 (28%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------ST 503
KTV C H+L+G C++GD+C+F H+ +TK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPESKI 121
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQDP 559
K C + R C G +C H + C N++ GFC G +C F H +LP + P
Sbjct: 122 KDCPWYDRGFCKHGPDCRHRHT-RRVICVNYLV-GFCPEGRSCKFMHPRFELPMGASEQP 179
Query: 560 PTP 562
P P
Sbjct: 180 PLP 182
>gi|410931251|ref|XP_003979009.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 4 [Takifugu rubripes]
Length = 237
Score = 49.3 bits (116), Expect = 0.011, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P K + C +++ C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFPGMDKSGSA-VCEFFMRAACMKGAMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 125
Score = 45.8 bits (107), Expect = 0.11, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 55/134 (41%), Gaps = 35/134 (26%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK---------------------------ST 503
KTV C H+L+G C++GD+C+F H+ +TK
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPESKI 121
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQDP 559
K C + R C G +C H + C N++ GFC G +C F H +LP + P
Sbjct: 122 KDCPWYDRGFCKHGPDCRHRHT-RRVICVNYLV-GFCPEGRSCKFMHPRFELPMGASEQP 179
Query: 560 PTPSTCTPELKPSP 573
P P + K P
Sbjct: 180 PLPLQSQNQSKMMP 193
>gi|399217191|emb|CCF73878.1| unnamed protein product [Babesia microti strain RI]
Length = 241
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 428 KRKRSALSKEKKAKKKQKERKKRAEKNRQLGVR--------RLKLPQNLKPKTVKYCHHY 479
KR A ++ +K + RK++ E N+ L +L L + K + C +Y
Sbjct: 48 KRSAEAANRHRKRYLEILRRKEQLEANKPLSNHTYSEVVGNQLYLSDSQKKNLI--CKYY 105
Query: 480 LK-GRCQEGDKCKFSHDTVPLT-KSTKACCHFAR--NSCMK-GDNCPFDHDLSKYPCENF 534
+ C GD C FSHD PLT K+ K C F + C K + C + HD S + C +
Sbjct: 106 YRYASCIHGDNCAFSHDCTPLTSKNLKLCKFFLQGEGKCSKSAEECCYSHDPSLFLCRSN 165
Query: 535 VAKGFCNRGDNCLFSH 550
V G C C F H
Sbjct: 166 VINGTCMNIGRCKFKH 181
>gi|255947148|ref|XP_002564341.1| Pc22g02970 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591358|emb|CAP97585.1| Pc22g02970 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 739
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS 527
C ++L G+C D C+FSHD +T C ++ +C+ GD CPF HD S
Sbjct: 284 CKYWLSTGQCLRAD-CRFSHDL-----TTHVCKYWVMGNCLAGDGCPFSHDPS 330
>gi|156084372|ref|XP_001609669.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796921|gb|EDO06101.1| hypothetical protein BBOV_II001430 [Babesia bovis]
Length = 227
Score = 48.9 bits (115), Expect = 0.011, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 477 HHYLKGRCQEGDKCKFSHDTVPLT-KSTKACCHF---ARNSCMKGDNCPFDHDLSKYPCE 532
++Y G C G C+FSH+ +PLT K K C +F N C + H+ + C
Sbjct: 60 YYYRTGSCLHGSDCRFSHNCLPLTSKELKLCRYFLMGPTNCKYTAAECKYSHEPGLFLCR 119
Query: 533 NFVAKGFCNRGDNCLFSH 550
N + G CN C F H
Sbjct: 120 NNIVNGECNNLLRCKFKH 137
>gi|342878227|gb|EGU79582.1| hypothetical protein FOXB_09865 [Fusarium oxysporum Fo5176]
Length = 252
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK------STKACCHFARNSCMKGDNCPFDHD--LS 527
C + G C G +C H + T ++ C H+ R C KG++C F H+ L
Sbjct: 43 CKAFQSGHCPNGTRCPERHVSDSKTSQPSGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLR 102
Query: 528 KYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
K P C F+ G+C+ GD CL+ H + P+ + PP P
Sbjct: 103 KMPECNFFMRNGYCSNGDECLYLH-IDPQSRLPPCP 137
>gi|323509553|dbj|BAJ77669.1| cgd7_1120 [Cryptosporidium parvum]
Length = 579
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 78/199 (39%), Gaps = 51/199 (25%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPL-----TKSTKACCHFARNSCMKGDNCPFDH--- 524
K C + KG C+ GD C+F+H + L K TK C + ++C G+NCPF H
Sbjct: 83 TKLCLMFSKGACKNGDNCRFAHGSEDLRTPVNLKKTKLCPFWLSSACSIGENCPFAHGTT 142
Query: 525 ------DLSKYPCENFVAKGF-CNRGDNCLFSH-------------------KLPP--KE 556
D K + G C+ G C +H +LPP +E
Sbjct: 143 ELRVTNDFYKTSVCRYWKMGVKCDAGVLCRHAHGEAELRKKTNKHLLRRKDDQLPPSIRE 202
Query: 557 QDPPTP---------STCTPELKPSPPLYASNLLKP---LNNNKVSHQNVDALSNHGKVS 604
D P S ++ P PPL S+ +P L + SH + + SN
Sbjct: 203 DDLILPLRSNKFNENSRFLFQVPPPPPLVYSSSGQPVSSLGKMRQSHSHSNLHSNSRTGL 262
Query: 605 SFKNIEQSVAKSILKPPAL 623
F N + AK++ PP L
Sbjct: 263 GF-NTQSIQAKTL--PPIL 278
>gi|239792848|dbj|BAH72717.1| ACYPI007246 [Acyrthosiphon pisum]
Length = 148
Score = 48.9 bits (115), Expect = 0.011, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 462 LKLPQNLKPKTVK-YCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
L LP N K++ C Y KG C +G C H T C H+ R C KGD C
Sbjct: 26 LPLPFNGMDKSIAAVCSFYPKGSCSKGALCPMRHVR---GDRTVVCKHWLRGLCKKGDQC 82
Query: 521 PFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
F H D++K P F A+ C F H P K +D P
Sbjct: 83 EFLHEYDMTKMPECYFYARFNACHNKECPFLHIDPESKLKDCP 125
>gi|149034887|gb|EDL89607.1| rCG42591, isoform CRA_b [Rattus norvegicus]
Length = 158
Score = 48.9 bits (115), Expect = 0.011, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C +LK C +G C F H + + T C H+ R C KGD C F H D++K P
Sbjct: 9 CEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 65
Query: 534 FVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
F +K G C+ + C F H P K +D P
Sbjct: 66 FYSKFGECSNKE-CPFLHIDPESKIKDCP 93
Score = 45.1 bits (105), Expect = 0.19, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 32 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 88
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 89 IKDCPWYDRGFCKHGPLCRHRH 110
>gi|28279213|gb|AAH45986.1| Mkrn2 protein [Danio rerio]
Length = 305
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG +C FSHD + +K + C ++ R +C GD C +DH
Sbjct: 8 CRYFLHGVCREGSRCLFSHD-LTTSKPSTICKYYQRGACAYGDRCRYDH 55
>gi|357625054|gb|EHJ75607.1| cleavage and polyadenylation specific factor 4 [Danaus plexippus]
Length = 287
Score = 48.9 bits (115), Expect = 0.011, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C H+L+G C++GD+C+F H+ +TK + C +AR + CPF H SK
Sbjct: 69 CKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYARFNACHNKECPFLHIDPESKIKDCP 126
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G +C H
Sbjct: 127 WYDRGFCRHGPHCRHRH 143
Score = 43.5 bits (101), Expect = 0.54, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNS 513
+Q G L P + T C Y + G C G +C + H T C H+ R
Sbjct: 21 QQYGALPLPFP-GMDKSTAAVCEFYSQPGGCGNGPQCPYRHVR---GDRTVVCKHWLRGL 76
Query: 514 CMKGDNCPFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
C KGD C F H D++K P F A+ C F H P K +D P
Sbjct: 77 CKKGDQCEFLHEYDMTKMPECYFYARFNACHNKECPFLHIDPESKIKDCP 126
>gi|67606553|ref|XP_666758.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657808|gb|EAL36525.1| hypothetical protein Chro.70136 [Cryptosporidium hominis]
Length = 577
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPL-----TKSTKACCHFARNSCMKGDNCPFDHDLS 527
K C + KG C+ GD C+F+H + L K TK C + ++C G+NCPF H +
Sbjct: 83 TKLCLMFSKGACKNGDNCRFAHGSEDLRTPVNLKKTKLCPFWLSSACSIGENCPFAHGTT 142
Query: 528 KYPCEN-FVAKGFC 540
+ N F C
Sbjct: 143 ELRVTNDFYKTSVC 156
>gi|297273512|ref|XP_001086803.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Macaca mulatta]
Length = 162
Score = 48.9 bits (115), Expect = 0.011, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 26/102 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSH--DTVPLTK----------STKACCHFARNSCMKGDNCPF- 522
C H+L+G C++GD CKF H D + + S K C K +CP+
Sbjct: 51 CKHWLRGLCKKGDHCKFLHQYDITRMPECYFYSKFGDCSNKECPFLHVKPAFKSQDCPWY 110
Query: 523 ------DHDLSKYP------CENFVAKGFCNRGDNCLFSHKL 552
D L KY C N++ GFC G C FS K+
Sbjct: 111 DQGFCKDGPLCKYRHVPRIMCLNYLV-GFCPEGPKCRFSQKI 151
>gi|145346398|ref|XP_001417675.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577903|gb|ABO95968.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 82
Score = 48.9 bits (115), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGDNCPFDHDLSKYPCENF 534
C H+L+ C +G+ C F H KS C F A+ K +CP+ H L N
Sbjct: 9 CRHWLRNLCMKGNACGFLHQ---FDKSRMPTCRFFAKYGECKEPDCPYKHSLEDMKDCNM 65
Query: 535 VAKGFCNRGDNCLFSH 550
GFC G C F H
Sbjct: 66 YKLGFCIHGSLCRFRH 81
>gi|449533264|ref|XP_004173596.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 31-like, partial [Cucumis sativus]
Length = 577
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 503 TKACCHFARNSCMKGDNCPFDHDLS--KYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
T C +F SC +G C F H L + C+ F + C GD+CLFSH P +
Sbjct: 287 TSLCVYFLNGSCNRGSQCLFSHSLQSKRATCKFFFSLQGCRNGDSCLFSHDQSPSKSLSF 346
Query: 561 TPSTCTPE 568
+ C PE
Sbjct: 347 KSTLCLPE 354
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACC--HFARNSCMKGDNCPFDHD 525
C ++L G C G +C FSH +S +A C F+ C GD+C F HD
Sbjct: 290 CVYFLNGSCNRGSQCLFSHS----LQSKRATCKFFFSLQGCRNGDSCLFSHD 337
>gi|149054709|gb|EDM06526.1| similar to hypothetical protein D11Ertd636e (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 160
Score = 48.9 bits (115), Expect = 0.012, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 464 LP-QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
LP Q + + C+ + KG C +G C H+ + C H+ R C K D C F
Sbjct: 28 LPFQGMDKSSSAVCNFFAKGLCVKGMLCPLRHEQ---GEKMVVCKHWLRGLCRKSDCCNF 84
Query: 523 DH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
H D+S+ P F +K G CN + C F H P PK QD P
Sbjct: 85 LHQYDVSRMPVCYFHSKFGNCNNKE-CPFLHLKPVPKLQDCP 125
>gi|281209923|gb|EFA84091.1| hypothetical protein PPL_03164 [Polysphondylium pallidum PN500]
Length = 508
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKY--- 529
V+ C YL G+C E + C H TV + + C F R C +NCP+ H
Sbjct: 415 VRVCPKYLSGKC-EDENCTLQHKTVDIDQ-MPVCYQFLRGMCT-HENCPYLHVYVSRDAE 471
Query: 530 PCENFVAKGFCNRGDNCLFSH 550
C +F+ KG+C G CL H
Sbjct: 472 VCPDFL-KGYCPNGSECLLRH 491
>gi|453084392|gb|EMF12436.1| hypothetical protein SEPMUDRAFT_149114 [Mycosphaerella populorum
SO2202]
Length = 569
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 464 LPQNLKPKTVK-------YCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMK 516
+PQ + P K C YL+G+CQ G C FSHD T+ C +FA+ C
Sbjct: 83 MPQRMAPSPPKNKNTQHVPCKFYLQGQCQAGKMCPFSHDIESTTRPAP-CKYFAKGGCKF 141
Query: 517 GDNCPFDH 524
G C H
Sbjct: 142 GRKCALLH 149
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS----KYPCENFVAKGFCNRGDNCLFSHKLP 553
C + + C G CPF HD+ PC+ F AKG C G C H P
Sbjct: 102 CKFYLQGQCQAGKMCPFSHDIESTTRPAPCKYF-AKGGCKFGRKCALLHVTP 152
>gi|45382057|ref|NP_990073.1| makorin ring finger protein 1 [Gallus gallus]
gi|6572970|gb|AAF17490.1|AF192787_1 makorin 1 [Gallus gallus]
Length = 464
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + +S C ++ R C GD+C ++H
Sbjct: 54 CRYFMHGVCKEGDNCRYSHD-LSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 506 CCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C +F C +GDNC + HDL S C + +G C GD+C + H P +++ T
Sbjct: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVC-RYYQRGCCAYGDHCRYEHTKPLMQEEELT 112
Query: 562 PSTCTPELKPSP 573
T P K P
Sbjct: 113 --TVNPAAKTYP 122
>gi|385301812|gb|EIF45975.1| protein yth1 [Dekkera bruxellensis AWRI1499]
Length = 270
Score = 48.9 bits (115), Expect = 0.012, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 462 LKLPQNL-KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDN 519
LK P + K K V C ++L+G C+ GD C F H+ L+K + C ++A N C++ D
Sbjct: 121 LKHPSKIFKNKIV--CKYWLRGLCKMGDDCDFLHE-YNLSKMPE-CAYYAANGVCLQADE 176
Query: 520 CPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSH 550
C + H SK P C N+ GFC G C H
Sbjct: 177 CIYLHVDPKSKIPECYNYSNLGFCPEGPKCPRRH 210
Score = 47.0 bits (110), Expect = 0.041, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G C H + + K+ C ++ R C GD+C F H+ LSK P C + A G C
Sbjct: 113 CPYGRDCPLKHPS-KIFKNKIVCKYWLRGLCKMGDDCDFLHEYNLSKMPECAYYAANGVC 171
Query: 541 NRGDNCLFSHKLPPKEQDP 559
+ D C++ H + PK + P
Sbjct: 172 LQADECIYLH-VDPKSKIP 189
>gi|303321145|ref|XP_003070567.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110263|gb|EER28422.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320035965|gb|EFW17905.1| zinc finger family protein [Coccidioides posadasii str. Silveira]
Length = 484
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G+C G C SH+ P + + AC HF R C C + H +
Sbjct: 274 PNKVAICKEFLQTGKCSAGPSCDLSHEPSP--ERSPACVHFIRGRC-SNPACRYAH-IRV 329
Query: 529 YP----CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPL 584
P C +F G+C +GD C H + + D C + P P + + ++ L
Sbjct: 330 TPGAPVCRDFAILGYCGKGDQCQDRHVI--ECPDYANMGKCAKQKCPLPHIDRAGQIRKL 387
Query: 585 NNNKVSHQNVDALSNHGKVS 604
NK + N A N G+ +
Sbjct: 388 AANKADN-NTHATENPGEYA 406
>gi|76157055|gb|AAX28107.2| SJCHGC04818 protein [Schistosoma japonicum]
Length = 290
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 39/87 (44%), Gaps = 18/87 (20%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDLS------- 527
C++Y G C+ G+ C F H V C FA + C G NC F HD S
Sbjct: 29 CYYYQAGCCRNGNTCTFVHPKV-------RCRTFASDGWCPYGYNCHFWHDPSVKFPNVS 81
Query: 528 --KYPCENFVAKGFCNRGDNCLFSHKL 552
K PC+ F A C GD C FSH +
Sbjct: 82 FVKKPCQ-FFANNQCKYGDKCSFSHDI 107
>gi|296005261|ref|XP_002808962.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|225631848|emb|CAX64243.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 1627
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 27/126 (21%)
Query: 476 CHHYLKGRCQEGDKCKFSH---DTVPLTK--STKACCHFARNSCMKGDNCPFDHDLSKYP 530
C Y KG C G KC ++H D P+ K T+ C F S + C F H +
Sbjct: 8 CSFYAKGICARGSKCSWAHGQSDVRPMPKFYKTRMCYTFLSGSYCEASKCTFAHTEDELR 67
Query: 531 --------CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLK 582
C F G+CN+ D C +H + +L PS AS L+
Sbjct: 68 GSGKALRLCTKFFLDGYCNKSDKCPMAHHI--------------SQLDPSVKFTASELMN 113
Query: 583 PLNNNK 588
++NN+
Sbjct: 114 RMSNNE 119
>gi|154310937|ref|XP_001554799.1| hypothetical protein BC1G_06447 [Botryotinia fuckeliana B05.10]
gi|347832532|emb|CCD48229.1| hypothetical protein [Botryotinia fuckeliana]
Length = 361
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 66/170 (38%)
Query: 436 KEKKAKKKQKERKKRAEKNRQLGVRRL-------KLPQNLKPKTVKYCHHYLKGRCQEGD 488
K ++A+K+Q+ER+K A + + L K+P + PKTV C Y KG C++G
Sbjct: 55 KRRQAEKEQREREKIASEAAKKEAAELFKPVQVQKVPFGVDPKTV-LCQFYKKGHCEKGR 113
Query: 489 KCKFSHD--------------------------------------TVPLTK------STK 504
KCKFSHD +V L+K +T+
Sbjct: 114 KCKFSHDLNIERKSTKIDLAQDPREAEAEKRKEETSDDWDEEKLRSVVLSKKGNQKTTTE 173
Query: 505 ACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPP 554
C F ++ +G F + C N GD C++ HKLPP
Sbjct: 174 KVCKFFIDAVEEGKYGWF------WTCP--------NGGDKCMYQHKLPP 209
>gi|444728385|gb|ELW68843.1| DENN domain-containing protein 2A [Tupaia chinensis]
Length = 1319
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 508 HFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
+F C +GDNC + HDLS P C+ F +G+C GD C + H P K++D T
Sbjct: 901 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEDATT 957
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFD 523
Q++KP +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++
Sbjct: 891 QSMKPALSGL--YFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCIYGDRCRYE 945
Query: 524 H 524
H
Sbjct: 946 H 946
>gi|321252264|ref|XP_003192345.1| essential RNA-binding component of cleavage and polyadenylation
factor; Yth1p [Cryptococcus gattii WM276]
gi|317458813|gb|ADV20558.1| Essential RNA-binding component of cleavage and polyadenylation
factor, putative; Yth1p [Cryptococcus gattii WM276]
Length = 332
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 31/128 (24%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHD----TVP----LTKSTKA----------------- 505
K + C HYL+ C+ GD C+++HD T+P K K
Sbjct: 94 KKLTVCKHYLRNLCKMGDNCEYTHDFNLRTMPECIWFVKQGKCELGGECLYFHPRDRRVE 153
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTC 565
C + R C+ G NCP H + + CE + A GFC G +C +H P PP S
Sbjct: 154 CPDYNRGFCVLGPNCPRKH-IRRRMCEAYAA-GFCPDGRDCKLAH---PSPNRPPPESYI 208
Query: 566 TPELKPSP 573
P + P P
Sbjct: 209 NP-IPPDP 215
>gi|321473444|gb|EFX84411.1| hypothetical protein DAPPUDRAFT_301067 [Daphnia pulex]
Length = 405
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 33/153 (21%)
Query: 434 LSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLK----PKTVKYCHHYLKGRCQEGDK 489
L EK+ +K++KE + +A+K Q + ++ Q ++ PK++ C + +G C +GD+
Sbjct: 60 LEDEKRLQKEKKEAELKAQKEMQDLFKPVQTVQKVEKGADPKSI-LCAFFKQGTCGKGDR 118
Query: 490 CKFSHDTVPLTKSTKACCHF-ARNSCMKGDNCPFDHDLSKYPCE-------------NFV 535
CKFSHD K+ K + R+ +G N +D + K E + +
Sbjct: 119 CKFSHDLEIERKAEKRSLYCDVRDDEKEGTNEDWDEEKLKEVIEKKHAEADKKKTKTDII 178
Query: 536 AKGF--------------CNRGDNCLFSHKLPP 554
K F C G++C++ H LPP
Sbjct: 179 CKHFLDAVEKNKYGWFWQCPSGESCIYRHALPP 211
>gi|295665528|ref|XP_002793315.1| CCCH zinc finger protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278229|gb|EEH33795.1| CCCH zinc finger protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 456
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L+ G+C G C SHD P + + AC HF R C +C + H +
Sbjct: 275 PHKVAICKEFLQTGKCPAGLACDLSHDPSP--ERSPACLHFLRGRC-SNPSCRYAHVRVN 331
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
C +F G+C +GD C
Sbjct: 332 PGAPVCRDFAILGYCIKGDTC 352
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 497 VPLTKSTKACCHF-ARNSCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPP 554
+P+ K + C F + SC KG NCP+ HD K C+ F+ G C G C SH P
Sbjct: 245 MPIKKKDELCKRFTSTGSCFKGPNCPYIHDPHKVAICKEFLQTGKCPAGLACDLSHD-PS 303
Query: 555 KEQDP 559
E+ P
Sbjct: 304 PERSP 308
>gi|410516933|sp|Q4IPA4.2|YTH1_GIBZE RecName: Full=mRNA 3'-end-processing protein YTH1
gi|408399218|gb|EKJ78341.1| hypothetical protein FPSE_01446 [Fusarium pseudograminearum CS3096]
Length = 255
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK------STKACCHFARNSCMKGDNCPFDHD--LS 527
C + G C G +C H + T ++ C H+ R C KG++C F H+ L
Sbjct: 43 CKAFQSGHCPNGTRCPERHVSDSKTSQPTGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLR 102
Query: 528 KYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
K P C F+ G+C+ GD CL+ H + P+ + PP P
Sbjct: 103 KMPECNFFMRNGYCSNGDECLYLH-IDPQSRLPPCP 137
>gi|301098842|ref|XP_002898513.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104938|gb|EEY62990.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 609
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 440 AKKKQKERKKRAEKNRQLGVRRLKLPQNLK-PKTVKYCHHYLKGRCQEGDKCKFSHDT-V 497
A+K+ ER A + + + LK+ K KT + C + G C++GD CK+ H V
Sbjct: 50 AQKQHAERAVEATNDAVVYGKTLKVSLQRKFKKTTEPCRGFAAGICRKGDMCKYYHPAAV 109
Query: 498 PL----TKSTKACCHFARNSCMKGDNCPFDHDL 526
P ST+ C HF R C +G C F H L
Sbjct: 110 PSDVQGVPSTQLCRHFTRGFCAQGSACTFAHVL 142
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 499 LTKSTKACCHFARNSCMKGDNCPFDH------DLSKYP----CENFVAKGFCNRGDNCLF 548
K+T+ C FA C KGD C + H D+ P C +F +GFC +G C F
Sbjct: 80 FKKTTEPCRGFAAGICRKGDMCKYYHPAAVPSDVQGVPSTQLCRHFT-RGFCAQGSACTF 138
Query: 549 SHKL 552
+H L
Sbjct: 139 AHVL 142
>gi|357117146|ref|XP_003560335.1| PREDICTED: uncharacterized protein LOC100829964 [Brachypodium
distachyon]
Length = 1823
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ ++ C ++L+G C C + H V + + AC F + C GD C
Sbjct: 1634 KLTHQVLPERMQDCSYFLRGLCT-NTACPYRH--VKVNSNAPACEDFLKGYCADGDECRR 1690
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSHK---LPPKEQDPPTP 562
H Y C F A G C + +C H + K P TP
Sbjct: 1691 KH---TYVCPVFEATGECAQQSSCKLHHPKKLIKSKRSRPDTP 1730
>gi|449281115|gb|EMC88278.1| Zinc finger CCCH domain-containing protein 3, partial [Columba
livia]
Length = 348
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD-NCPFDHDLS--KYP 530
YC +Y + G+C G+ C + HD + C F R +C K D C F H +S K P
Sbjct: 122 YCMYYNRFGKCNRGESCPYIHD----PEKVAVCTRFLRGTCKKTDGTCSFSHKVSKDKMP 177
Query: 531 CENFVAKGFCNRGDNCLFSH 550
++ KG CN NC +SH
Sbjct: 178 VCSYFLKGICN-NSNCPYSH 196
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++LKG C + C +SH V +++ + C F + C G+ C H L C +F
Sbjct: 179 CSYFLKGICNNSN-CPYSH--VYVSRKAEICQDFLKGYCPMGEKCKKKHTLV---CPDFA 232
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDP 559
KG C RG C H P K++ P
Sbjct: 233 KKGSCPRGAQCKLLH--PQKKRHP 254
>gi|242021708|ref|XP_002431285.1| Cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Pediculus humanus corporis]
gi|212516553|gb|EEB18547.1| Cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Pediculus humanus corporis]
Length = 233
Score = 48.5 bits (114), Expect = 0.015, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C H+L+G C++GD+C+F H+ +TK + C ++R + CPF H SK
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSRFNACHNKECPFLHIDPESKIKDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G +C H
Sbjct: 126 WYDRGFCRHGPHCRHRH 142
Score = 47.0 bits (110), Expect = 0.046, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 462 LKLPQNLKPKTVK-YCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
L LP + K++ C Y KG C +G C F H T C H+ R C KGD C
Sbjct: 26 LPLPFSGMDKSIAAVCTFYPKGTCNKGAACPFRHIR---GDRTIVCKHWLRGLCKKGDQC 82
Query: 521 PFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
F H D++K P F ++ C F H P K +D P
Sbjct: 83 EFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPESKIKDCP 125
>gi|145348211|ref|XP_001418549.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578778|gb|ABO96842.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 234
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 22/99 (22%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHD----------TVPLTKSTKACCHFARNSCMKGDNCPF 522
V C+ + +G C GD C+FSH C F +C GD+C F
Sbjct: 136 VPKCYAFERGECDRGDSCRFSHGPGSAAGRGGGGGRGGGGGGVCYAFQNGNCSYGDSCRF 195
Query: 523 DHDLSKYP-----------CENFVAKGFCNRGDNCLFSH 550
HD + P C F A+G C RGD+C FSH
Sbjct: 196 SHDPNAPPSRPGSRGPAGKCYAF-AEGNCTRGDSCRFSH 233
>gi|212534986|ref|XP_002147649.1| CCCH zinc finger and SMR domain protein [Talaromyces marneffei ATCC
18224]
gi|210070048|gb|EEA24138.1| CCCH zinc finger and SMR domain protein [Talaromyces marneffei ATCC
18224]
Length = 724
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGV--RRLKLPQNLKPKTVKYCHHYLK-GRCQEGD 488
+ALS++ QK + R + + V R P N + +T C ++L G C D
Sbjct: 232 AALSEDPGKDGSQKSDEGRVLVGKSMTVDHSRPSTPSN-QARTPVVCKYWLSTGTCLRAD 290
Query: 489 KCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD 525
C+FSHD + C ++ +C+ GD CPF HD
Sbjct: 291 -CRFSHDL-----TNHICKYWMMGNCLAGDGCPFSHD 321
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 481 KGRCQEGDKCKFSHDTVPLTKSTKA----CCHF--ARNSCMKGDNCPFDHDLSKYPCENF 534
+GR G H + P T S +A C + + +C++ D C F HDL+ + C+ +
Sbjct: 248 EGRVLVGKSMTVDH-SRPSTPSNQARTPVVCKYWLSTGTCLRAD-CRFSHDLTNHICKYW 305
Query: 535 VAKGFCNRGDNCLFSH 550
+ G C GD C FSH
Sbjct: 306 MM-GNCLAGDGCPFSH 320
>gi|169603423|ref|XP_001795133.1| hypothetical protein SNOG_04721 [Phaeosphaeria nodorum SN15]
gi|111067361|gb|EAT88481.1| hypothetical protein SNOG_04721 [Phaeosphaeria nodorum SN15]
Length = 232
Score = 48.5 bits (114), Expect = 0.016, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDH--DLSKYPCE 532
C H+L+G C++G+ C+F H+ + C ++AR +C GD+C + H +K P
Sbjct: 53 CKHWLRGLCKKGETCEFLHEYN--LRRMPECSYYARTQTCSNGDDCLYLHIDPEAKRPSC 110
Query: 533 NFVAKGFCNRGDNCLFSH 550
+GFC G C H
Sbjct: 111 PHYDRGFCPLGPYCALKH 128
>gi|328856795|gb|EGG05915.1| hypothetical protein MELLADRAFT_29924 [Melampsora larici-populina
98AG31]
Length = 112
Score = 48.5 bits (114), Expect = 0.016, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 468 LKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPF---D 523
L KTV C H+L+G C++G+ C+F H+ ++ C F + C GD C + D
Sbjct: 3 LHAKTV--CKHWLRGLCKKGNSCEFLHEYN--LRTMPECWFFGKYGFCSNGDECMYLHVD 58
Query: 524 HDLSKYPCENFVAKGFCNRGDNCLFSHKLPP 554
+ C ++ +GFC++G C H P
Sbjct: 59 ERMRVLECMDY-RRGFCSKGPTCSQKHIRRP 88
Score = 44.7 bits (104), Expect = 0.25, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 498 PLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH 550
P + C H+ R C KG++C F H+ L P C F GFC+ GD C++ H
Sbjct: 1 PTLHAKTVCKHWLRGLCKKGNSCEFLHEYNLRTMPECWFFGKYGFCSNGDECMYLH 56
>gi|189203027|ref|XP_001937849.1| mRNA 3'-end-processing protein yth1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984948|gb|EDU50436.1| mRNA 3'-end-processing protein yth1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 275
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CE 532
C YL+G C +G++C H+ V + + C H+ R C KG+ C F H+ L + P C
Sbjct: 68 CKAYLQGHCPDGNRCPNKHN-VTSSYNNLVCKHWLRGLCKKGETCEFLHEYNLRRMPECS 126
Query: 533 NFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
+ C+ GD+CL+ H + P+ + P P
Sbjct: 127 YYARTQTCSNGDDCLYLH-IDPEAKRPSCP 155
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN-SCMKGDNCPFDH--DLSKYPCE 532
C H+L+G C++G+ C+F H+ + C ++AR +C GD+C + H +K P
Sbjct: 97 CKHWLRGLCKKGETCEFLHEYN--LRRMPECSYYARTQTCSNGDDCLYLHIDPEAKRPSC 154
Query: 533 NFVAKGFCNRGDNCLFSH 550
+GFC G +C H
Sbjct: 155 PHYDRGFCPLGPHCSLKH 172
>gi|302818936|ref|XP_002991140.1| hypothetical protein SELMODRAFT_448311 [Selaginella moellendorffii]
gi|300141071|gb|EFJ07786.1| hypothetical protein SELMODRAFT_448311 [Selaginella moellendorffii]
Length = 716
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 22/97 (22%)
Query: 476 CHHYLKG--RCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--------- 524
C ++L C++G++C+F H + + C ++ SC+ D CPF H
Sbjct: 39 CVYFLASPLTCKKGEECEFRHSET-ARINPRDCWYWVSGSCLNRD-CPFRHPPLEAGNPT 96
Query: 525 --------DLSKYPCENFVAKGFCNRGDNCLFSHKLP 553
+ + PC F+ +G+C +GD C F H +P
Sbjct: 97 PGQQQPASNKGRTPCYFFI-QGYCAKGDRCPFLHGVP 132
>gi|327298047|ref|XP_003233717.1| CCCH zinc finger protein [Trichophyton rubrum CBS 118892]
gi|326463895|gb|EGD89348.1| CCCH zinc finger protein [Trichophyton rubrum CBS 118892]
Length = 444
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G+C G C SHD P + + AC HF R C +C + H +
Sbjct: 269 PNKVAICKDFLQTGKCDAGVACDLSHDPCP--ERSPACLHFLRGRCTN-PSCRYTH-VHI 324
Query: 529 YP----CENFVAKGFCNRGDNC--LFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLK 582
P C +F G+C++G +C H+ P D C + P P + + ++
Sbjct: 325 TPGAPVCRDFAILGYCSKGASCEGRHVHECP----DYANTGNCGNKKCPLPHVDRAGQIR 380
Query: 583 PLNNNKV 589
NKV
Sbjct: 381 KFTANKV 387
>gi|302899162|ref|XP_003047993.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728925|gb|EEU42280.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 378
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 39/161 (24%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGR 483
SA K K+A+K+ +ER+K+A + + L K+P + PKTV C Y KG
Sbjct: 49 SAEEKRKQAEKEAREREKKAAEEARRETEALLNKPAQVQKVPFGVDPKTV-VCIFYKKGN 107
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCH-----FARNSCMKGDNCPFDHD------LSKYP-- 530
C++G KCKF+HD K+ K + + + +D + LSK
Sbjct: 108 CEKGRKCKFAHDLSIERKTEKKNLYSDTRKEEEETKKAETSADWDEEKLRKVVLSKKGNQ 167
Query: 531 -------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C++ H LPP
Sbjct: 168 RTTTDKVCKYFIEAIEDGKYGWFWICPNGGDKCMYKHALPP 208
>gi|334182742|ref|NP_173577.2| zinc finger CCCH domain-containing protein [Arabidopsis thaliana]
gi|332191999|gb|AEE30120.1| zinc finger CCCH domain-containing protein [Arabidopsis thaliana]
Length = 2166
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C +YL+G C + C + H V + C F + C +GD C
Sbjct: 1984 KLTHKVIPERMPDCSYYLQGLCNN-EACPYRH--VHVNPIAPICDGFLKGYCSEGDECRK 2040
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
H Y C F A G C++G C H PK Q
Sbjct: 2041 KH---SYNCPVFEATGSCSQGLKCKLHH---PKNQ 2069
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
K P P + C +L G C + CK +H +P + C ++ + C + CP+
Sbjct: 1957 KCPYVHDPSKIAVCTKFLNGLCANAN-CKLTHKVIP--ERMPDCSYYLQGLC-NNEACPY 2012
Query: 523 DHDLSKYP----CENFVAKGFCNRGDNCLFSH 550
H + P C+ F+ KG+C+ GD C H
Sbjct: 2013 RH-VHVNPIAPICDGFL-KGYCSEGDECRKKH 2042
>gi|149034886|gb|EDL89606.1| rCG42591, isoform CRA_a [Rattus norvegicus]
Length = 199
Score = 48.5 bits (114), Expect = 0.017, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C +LK C +G C F H + + T C H+ R C KGD C F H D++K P
Sbjct: 9 CEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 65
Query: 534 FVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
F +K G C+ + C F H P K +D P
Sbjct: 66 FYSKFGECSNKE-CPFLHIDPESKIKDCP 93
Score = 44.3 bits (103), Expect = 0.29, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 32 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 88
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 89 IKDCPWYDRGFCKHGPLCRHRH 110
>gi|50556018|ref|XP_505417.1| YALI0F14531p [Yarrowia lipolytica]
gi|49651287|emb|CAG78226.1| YALI0F14531p [Yarrowia lipolytica CLIB122]
Length = 367
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 461 RLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
R + + P V C +YL+G+C + C SH+ P ++ C HFA C NC
Sbjct: 197 RPRCKRQHTPGRVAACKYYLRGQCSTSN-CPLSHE--PSAHNSPNCRHFAHGLCTN-QNC 252
Query: 521 PFDH----DLSKYPCENFVAKGFCNRGDNCLFSHKLPPK 555
+ H D + Y C +F G+C+RG +C H + P+
Sbjct: 253 RYSHVKHNDDAPY-CFSFNDSGWCDRGKDCPDRHDIKPE 290
>gi|410218040|gb|JAA06239.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410264696|gb|JAA20314.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410304626|gb|JAA30913.1| makorin ring finger protein 1 [Pan troglodytes]
Length = 482
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 108
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|391345540|ref|XP_003747043.1| PREDICTED: uncharacterized protein LOC100908239 [Metaseiulus
occidentalis]
Length = 990
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C Y++G C+ D CKFSHD +T C + NSC KG CPF H
Sbjct: 833 CTFYMEGNCRRTD-CKFSHDLSNIT-----CRFWEDNSCFKGSACPFLH 875
>gi|9454580|gb|AAF87903.1|AC015447_13 Hypothetical protein [Arabidopsis thaliana]
Length = 2123
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C +YL+G C + C + H V + C F + C +GD C
Sbjct: 1941 KLTHKVIPERMPDCSYYLQGLCNN-EACPYRH--VHVNPIAPICDGFLKGYCSEGDECRK 1997
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
H Y C F A G C++G C H PK Q
Sbjct: 1998 KH---SYNCPVFEATGSCSQGLKCKLHH---PKNQ 2026
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
K P P + C +L G C + CK +H +P + C ++ + C + CP+
Sbjct: 1914 KCPYVHDPSKIAVCTKFLNGLCANAN-CKLTHKVIP--ERMPDCSYYLQGLC-NNEACPY 1969
Query: 523 DHDLSKYP----CENFVAKGFCNRGDNCLFSH 550
H + P C+ F+ KG+C+ GD C H
Sbjct: 1970 RH-VHVNPIAPICDGFL-KGYCSEGDECRKKH 1999
>gi|221272069|sp|B0F0H3.2|MKRN2_XENLA RecName: Full=Probable E3 ubiquitin-protein ligase makorin-2
Length = 409
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 468 LKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+ PK V C ++L G C+EG +C FSHD +K + C F R C G C +DH
Sbjct: 1 MSPKQVT-CRYFLHGVCREGSRCLFSHDLA-TSKPSTVCRFFLRGQCAYGTRCRYDH 55
>gi|170027604|ref|XP_001841687.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167862257|gb|EDS25640.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 600
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
K P+ PK V C +LKG C C SHD V L K C F C+K D CP+
Sbjct: 372 KCPRLHDPKHVIICPRFLKGECTLAAGCLLSHD-VSLEK-MPVCRFFLEGRCVKND-CPY 428
Query: 523 DHDL---SKYPCENFVAKGFCNRGDNCLFSHKLPPKEQD 558
H ++ CE+F+ +G+C C H+ E D
Sbjct: 429 LHKKVSETERICEDFL-RGYCPLAAKCKRRHEFVCPEYD 466
>gi|402865000|ref|XP_003896727.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Papio anubis]
Length = 486
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 108
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|344243027|gb|EGV99130.1| Cleavage and polyadenylation specificity factor subunit 4
[Cricetulus griseus]
Length = 274
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|294909782|ref|XP_002777849.1| UOS5/S1 protein, putative [Perkinsus marinus ATCC 50983]
gi|239885811|gb|EER09644.1| UOS5/S1 protein, putative [Perkinsus marinus ATCC 50983]
Length = 332
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTV-----PLTKSTKACCHFARNSCMKGDNCPFDHDLS 527
K C +L+GRC G KC F+H T P K T C + + C KG C + H +
Sbjct: 71 TKVCSLFLEGRCHYGSKCFFAHSTSELQQQPNLKKTSLCRLYRQGKCTKGSACTYAHSAA 130
Query: 528 KYPCEN------FVAKGFCNRGDNCLFSH-----KLPPK 555
+ + G C+ G C F+H + PPK
Sbjct: 131 ELRATEKTVMCIWWLSGNCSHGSKCRFAHGEAELRSPPK 169
>gi|223468620|ref|NP_038474.2| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Homo sapiens]
gi|67477468|sp|Q9UHC7.3|MKRN1_HUMAN RecName: Full=E3 ubiquitin-protein ligase makorin-1; AltName:
Full=RING finger protein 61
gi|12053135|emb|CAB66746.1| hypothetical protein [Homo sapiens]
gi|23273984|gb|AAH37400.1| Makorin ring finger protein 1 [Homo sapiens]
gi|40787667|gb|AAH64838.1| Makorin ring finger protein 1 [Homo sapiens]
gi|51094780|gb|EAL24026.1| makorin, ring finger protein, 1 [Homo sapiens]
gi|119604355|gb|EAW83949.1| makorin, ring finger protein, 1, isoform CRA_a [Homo sapiens]
gi|123983178|gb|ABM83330.1| makorin, ring finger protein, 1 [synthetic construct]
gi|157928042|gb|ABW03317.1| makorin, ring finger protein, 1 [synthetic construct]
gi|189054945|dbj|BAG37929.1| unnamed protein product [Homo sapiens]
Length = 482
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|347968471|ref|XP_003436228.1| AGAP013044-PA [Anopheles gambiae str. PEST]
gi|333467988|gb|EGK96785.1| AGAP013044-PA [Anopheles gambiae str. PEST]
Length = 296
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 35/123 (28%)
Query: 476 CHHYLKGRCQEGDKCKFSHDT---------------------VPLTK-----STKACCHF 509
C H+L+G C++GD+C+F H+ P K C +
Sbjct: 71 CKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPESKIKDCPWY 130
Query: 510 ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLPP----KEQDPPTP 562
R C G NC H + + C N++A GFC G C + H +LPP K+Q P P
Sbjct: 131 DRGFCRHGPNCRHRH-VRRVLCNNYLA-GFCPDGPECKYMHPRFELPPPPEIKDQTPKRP 188
Query: 563 STC 565
+TC
Sbjct: 189 TTC 191
>gi|410218042|gb|JAA06240.1| makorin ring finger protein 1 [Pan troglodytes]
Length = 482
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQKE 116
>gi|114616323|ref|XP_519424.2| PREDICTED: E3 ubiquitin-protein ligase makorin-1 isoform 5 [Pan
troglodytes]
gi|410218038|gb|JAA06238.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410264694|gb|JAA20313.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410304624|gb|JAA30912.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410329651|gb|JAA33772.1| makorin ring finger protein 1 [Pan troglodytes]
Length = 482
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|380787373|gb|AFE65562.1| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Macaca mulatta]
gi|384939788|gb|AFI33499.1| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Macaca mulatta]
Length = 482
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|6572964|gb|AAF17487.1|AF192784_1 makorin 1 [Homo sapiens]
Length = 482
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|412993013|emb|CCO16546.1| conserved hypothetical protein [Bathycoccus prasinos]
Length = 266
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 46/112 (41%), Gaps = 30/112 (26%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTK----ACCHFARNSCMKGDNCPFDH 524
KPK C+ Y +G C G+ C+FSH + P C R C +GD+C F H
Sbjct: 136 KPK----CYAYERGECTRGENCRFSHGSEPTYGGGGGGAPVCYAHQRGECTRGDSCKFSH 191
Query: 525 D------------------LSKYPCENFVAKGFCNRGDNCLFSH---KLPPK 555
+ C F+ KG C RGD+C F+H PPK
Sbjct: 192 EEGGGGGSRPPSRGGGGGGGGGGVCFAFL-KGECTRGDSCRFAHDKNAAPPK 242
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 20/94 (21%)
Query: 476 CHHYLKGRCQEGDKCKFSHD-------------TVPLTKSTKACCHFARNSCMKGDNCPF 522
C+ + +G C GD CKFSH+ C F + C +GD+C F
Sbjct: 173 CYAHQRGECTRGDSCKFSHEEGGGGGSRPPSRGGGGGGGGGGVCFAFLKGECTRGDSCRF 232
Query: 523 DHDLSKYP------CENFVAKGFCNRGDNCLFSH 550
HD + P C F +G C+RGD C F H
Sbjct: 233 AHDKNAAPPKASGTCYAF-QEGRCDRGDACRFQH 265
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 476 CHHYLKGRCQEGDKCKFSHD-TVPLTKSTKACCHFARNSCMKGDNCPFDHD 525
C +LKG C GD C+F+HD K++ C F C +GD C F H+
Sbjct: 216 CFAFLKGECTRGDSCRFAHDKNAAPPKASGTCYAFQEGRCDRGDACRFQHN 266
>gi|6601434|gb|AAF18979.1| makorin 1 [Homo sapiens]
gi|19684160|gb|AAH25955.1| Makorin ring finger protein 1 [Homo sapiens]
gi|261858840|dbj|BAI45942.1| Makorin-1 (RING finger protein 61) [synthetic construct]
Length = 482
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|391333788|ref|XP_003741292.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Metaseiulus occidentalis]
Length = 269
Score = 48.1 bits (113), Expect = 0.021, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH- 524
+++K C H+L+G C++GD+C+F H+ +TK + C ++R + CPF H
Sbjct: 58 RHIKGDRTVVCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSRFNACSNKECPFLHI 115
Query: 525 --DLSKYPCENFVAKGFCNRGDNCLFSH 550
D C + +GFC G C H
Sbjct: 116 DPDSKIKDCP-WYDRGFCRHGPTCRHRH 142
Score = 47.8 bits (112), Expect = 0.028, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 454 NRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS 513
++QLG L P + C Y++G+C C F H T C H+ R
Sbjct: 20 DQQLGAAPLPFP-GMDRSVALACTFYMRGKCTMDASCPFRHIK---GDRTVVCKHWLRGL 75
Query: 514 CMKGDNCPFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
C KGD C F H D++K P F ++ C F H P K +D P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSRFNACSNKECPFLHIDPDSKIKDCP 125
>gi|383412891|gb|AFH29659.1| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Macaca mulatta]
Length = 482
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|432865201|ref|XP_004070466.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2-like
[Oryzias latipes]
Length = 355
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
C H+LKG C+ G +C + H+ P+ ++ C +F + +C GD C + H L
Sbjct: 10 CRHFLKGTCRYGPRCIYRHEW-PVMPPSQICRYFQKGNCWYGDRCRYLHVL 59
>gi|393912029|gb|EJD76558.1| hypothetical protein LOAG_16507 [Loa loa]
Length = 292
Score = 48.1 bits (113), Expect = 0.021, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 33/116 (28%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--------DLS 527
C H+L+G C++GD+C+F H+ L+K + C F++ CPF H D
Sbjct: 89 CKHWLRGLCKKGDQCEFLHE-YDLSKMPE-CFFFSKYMACSNRECPFRHIDPESKIKDCP 146
Query: 528 KYP-------------------CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPST 564
Y C NF+A GFC G +C ++H P PP +T
Sbjct: 147 WYDRGFCRHGPFCKHRHRRRVLCPNFLA-GFCMDGRDCKYAH---PSFNIPPVDTT 198
>gi|121703181|ref|XP_001269855.1| mRNA cleavage and polyadenylation specificity factor complex
subunit, putative [Aspergillus clavatus NRRL 1]
gi|119397998|gb|EAW08429.1| mRNA cleavage and polyadenylation specificity factor complex
subunit, putative [Aspergillus clavatus NRRL 1]
Length = 255
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 23/107 (21%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT--------------VP-LTKSTKACCHFARNSCMKG 517
V C Y +G C G C H T P T + C HF + C KG
Sbjct: 44 VPVCKAYSEGHCPLGPACPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKG 103
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKE 556
C + H+ L + P C++F G+C GD+CL+ H +LPP E
Sbjct: 104 LKCEYLHEYNLRRMPECQSFTRSGYCPNGDDCLYQHVREQARLPPCE 150
>gi|342875526|gb|EGU77270.1| hypothetical protein FOXB_12230 [Fusarium oxysporum Fo5176]
Length = 358
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 47/165 (28%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGR 483
SA K+K+A+++ +ER+K+A + + + + K+P + PKTV C Y KG
Sbjct: 49 SAEEKKKQAEREAREREKKAAEEAKRDLEAMMNKPAQVQKVPFGVDPKTV-VCIFYKKGN 107
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGD---------NCPFDHD------LSK 528
C++G KCKFSHD K+ K + + +GD + +D D LSK
Sbjct: 108 CEKGKKCKFSHDLSVERKTEKKNLY----NDSRGDEEENKKAETSADWDEDKLRSVVLSK 163
Query: 529 YP---------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C + H LPP
Sbjct: 164 KGNQQTTTDKVCKYFIEAIEDGKYGWFWICPNGGDKCKYKHALPP 208
>gi|344236286|gb|EGV92389.1| Putative cleavage and polyadenylation specificity factor subunit
4-like protein [Cricetulus griseus]
Length = 216
Score = 48.1 bits (113), Expect = 0.021, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 18/99 (18%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSH----DTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
K + + C H+L+G C++GD C F H D +P+ C+F +S G C + H
Sbjct: 61 KGEKIVVCKHWLRGLCRKGDCCNFLHQYDIDRMPV-------CYF--HSKFVGPLCKY-H 110
Query: 525 DLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPS 563
+ + C N+ GFC +G C F H PK PS
Sbjct: 111 HVHQVMCLNYFT-GFCPKGPKCQFGH---PKMSQVLHPS 145
Score = 39.3 bits (90), Expect = 9.8, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 499 LTKSTKACCHF-ARNSCMKGDNCPFDHDLSK--YPCENFVAKGFCNRGDNCLFSHK 551
+ KS A C+F A+ C KG CP H+ + C++++ +G C +GD C F H+
Sbjct: 33 MDKSNSAVCNFFAKGLCEKGTLCPLRHEKGEKIVVCKHWL-RGLCRKGDCCNFLHQ 87
>gi|396462920|ref|XP_003836071.1| hypothetical protein LEMA_P054120.1 [Leptosphaeria maculans JN3]
gi|312212623|emb|CBX92706.1| hypothetical protein LEMA_P054120.1 [Leptosphaeria maculans JN3]
Length = 362
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 40/181 (22%)
Query: 411 QEQGITTKDKLDSGACNKRKRSALSKEKKAKKK---QKERKKRAEKNRQLGVRRLKLPQN 467
Q+Q K SG + KR A K ++ K+K ++ RK+ A+ + + ++ K+P
Sbjct: 32 QKQIAQIKATAASGGSPEEKRKAAEKAQREKEKLAAEQARKEVADLFKPVQIQ--KVPFG 89
Query: 468 LKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCH--------FARNSCMKGDN 519
+ PKTV C + KG C++G KCKFSHD K+ K + A K DN
Sbjct: 90 VDPKTV-LCQFFKKGNCEKGKKCKFSHDPAVERKTEKRSLYTDSRDQEKEAEEEKKKKDN 148
Query: 520 C-PFDHD------LSKY---------PCENFVAK---------GFC-NRGDNCLFSHKLP 553
+D + LSK+ C+ F+ C N GD C++ H LP
Sbjct: 149 MDDWDEEKLRQVVLSKHGNPKTTTDKVCKYFIQAIEDQKYGWFWVCPNGGDKCMYKHSLP 208
Query: 554 P 554
P
Sbjct: 209 P 209
>gi|388580760|gb|EIM21072.1| hypothetical protein WALSEDRAFT_38769 [Wallemia sebi CBS 633.66]
Length = 428
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 474 KYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLS--KY 529
K C + K GRC + C + HD+ T C HF R C D+ CP H S
Sbjct: 209 KRCPTFTKSGRCSKALHCPYVHDS----SKTAICPHFLRKKCRNSDSSCPLSHTPSPNNM 264
Query: 530 P-CENFVAKGFCNRGDNCLFSH 550
P C +F + C GD CLF+H
Sbjct: 265 PNCSHFESPNGCRAGDECLFTH 286
>gi|353237438|emb|CCA69411.1| related to Cleavage and polyadenylation specificity factor
[Piriformospora indica DSM 11827]
Length = 290
Score = 48.1 bits (113), Expect = 0.022, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 33/128 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDHDL-SKYPCEN 533
C H+L+G C++ D C+F H+ + C +A+N C G+ C + H S+ C +
Sbjct: 98 CKHWLRGLCKKSDACEFLHEYN--LRRMPECWWYAKNGFCSAGEECLYAHPKGSRVECPD 155
Query: 534 FVAKGFCNRGDNCLFSH---------------------------KLPPKEQDPPTPSTCT 566
+ +GFC G +C H LPP PTP
Sbjct: 156 Y-NRGFCKLGPDCPRKHVRRVICQLYLNGFCPAGSSCPKGHPKPTLPPPSAYEPTPDA-Q 213
Query: 567 PELKPSPP 574
EL P PP
Sbjct: 214 RELGPPPP 221
>gi|169790769|ref|NP_001116070.1| probable E3 ubiquitin-protein ligase makorin-2 [Xenopus laevis]
gi|150416784|gb|ABR68861.1| makorin-2 [Xenopus laevis]
Length = 408
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 468 LKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+ PK V C ++L G C+EG +C FSHD +K + C F R C G C +DH
Sbjct: 1 MSPKQVT-CRYFLHGVCREGSRCLFSHDLA-TSKPSTVCRFFLRGQCAYGTRCRYDH 55
>gi|340378269|ref|XP_003387650.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Amphimedon queenslandica]
Length = 277
Score = 48.1 bits (113), Expect = 0.023, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 456 QLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSH---DTVPLTKSTKACCHFARN 512
Q+G L P K K C +L+G C G C + H D V + C H+ R
Sbjct: 23 QVGAIPLPFPGMDKNKA-PLCEFFLQGTCSRGFNCPYRHIKGDRVIV------CKHWLRQ 75
Query: 513 SCMKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSH 550
C KGD C F H D+ + P C F G CN D C F H
Sbjct: 76 LCNKGDECEFLHEYDMGRMPVCYFFQKFGECNNKD-CQFMH 115
>gi|336464161|gb|EGO52401.1| hypothetical protein NEUTE1DRAFT_125898 [Neurospora tetrasperma
FGSC 2508]
Length = 317
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 505 ACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C H+ R C KG++C F H+ L K P C FV G+C+ GD CL+ H + P + PP
Sbjct: 98 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLH-IDPLSRLPPC 156
Query: 562 P 562
P
Sbjct: 157 P 157
>gi|126340761|ref|XP_001368017.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Monodelphis
domestica]
Length = 478
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EG+ C++SHD + ++S C ++ R C GD C ++H
Sbjct: 57 CRYFMHGVCKEGNNCRYSHD-LSTSQSAMVCRYYQRGCCAYGDRCRYEH 104
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 506 CCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C +F C +G+NC + HDL S C + +G C GD C + H P K ++
Sbjct: 57 CRYFMHGVCKEGNNCRYSHDLSTSQSAMVC-RYYQRGCCAYGDRCRYEHTKPLKREEVTA 115
Query: 562 PSTCTPELKPSPP 574
+ KP PP
Sbjct: 116 ANLAA---KPDPP 125
>gi|403285965|ref|XP_003934279.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Saimiri boliviensis boliviensis]
Length = 216
Score = 48.1 bits (113), Expect = 0.023, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C +LK C +G C F H + + T C H+ R C KGD C F H D++K P
Sbjct: 13 CEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 69
Query: 534 FVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
F +K G C+ + C F H P K +D P
Sbjct: 70 FYSKFGECSNKE-CPFLHIDPESKIKDCP 97
Score = 43.9 bits (102), Expect = 0.35, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 36 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 92
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 93 IKDCPWYDRGFCKHGPLCRHRH 114
>gi|300706691|ref|XP_002995591.1| hypothetical protein NCER_101464 [Nosema ceranae BRL01]
gi|239604757|gb|EEQ81920.1| hypothetical protein NCER_101464 [Nosema ceranae BRL01]
Length = 159
Score = 48.1 bits (113), Expect = 0.024, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHD----TVP-------LTKST----------- 503
Q++K T C H+L+G C++G KC+F H+ +P L + T
Sbjct: 44 QHIKLSTAVICKHWLRGLCKKGKKCEFIHEYDLKKMPQCYFFSKLGECTNPECFYLHSVV 103
Query: 504 --KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
K C + R C G C H + K C N+ GFC +G C + H
Sbjct: 104 KRKECAWYNRGFCRHGSQCKNRH-VRKKMCYNYYL-GFCIKGPTCEYGH 150
>gi|291190156|ref|NP_001167194.1| probable E3 ubiquitin-protein ligase makorin-2 [Salmo salar]
gi|223648582|gb|ACN11049.1| Makorin-2 [Salmo salar]
Length = 438
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG++C FSHD +K + C + R C GD C +DH
Sbjct: 8 CRYFLHGVCREGNRCMFSHDLT-TSKPSTICKFYQRGVCAYGDRCRYDH 55
>gi|395826008|ref|XP_003786212.1| PREDICTED: LOW QUALITY PROTEIN: putative cleavage and
polyadenylation specificity factor subunit 4-like
protein [Otolemur garnettii]
Length = 166
Score = 47.8 bits (112), Expect = 0.024, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 448 KKRAEKNRQLGVRRLKLP-QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKAC 506
KK E + G+ LP Q + C+ + KG C++G C F H+ + C
Sbjct: 16 KKDVEMQKGTGL----LPFQGMDKSGSAVCNSFAKGLCKKGKLCPFWHER---REKXLVC 68
Query: 507 CHFARNSCMKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
H+ R C KGD+C H ++++ P F +K G CN C F H P + QD P
Sbjct: 69 KHWRRELCKKGDHCGSLHQCNIARMPQRYFYSKFGDCN-NKQCPFLHVKPAFRSQDCP 125
>gi|224083424|ref|XP_002307020.1| predicted protein [Populus trichocarpa]
gi|222856469|gb|EEE94016.1| predicted protein [Populus trichocarpa]
Length = 858
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 15/88 (17%)
Query: 472 TVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP- 530
+ + C ++ GRC+ G C+F H + + R P HD +YP
Sbjct: 161 SAQLCKDFVAGRCRRGSHCQFLHQDTETYEDD-----WERPRKTAASKYPISHDTKQYPM 215
Query: 531 --------CENFVAKGFCNRGDNCLFSH 550
C NF+ KG C RG++C ++H
Sbjct: 216 GSGRSANCCTNFL-KGNCRRGESCRYAH 242
>gi|449680209|ref|XP_002153918.2| PREDICTED: uncharacterized protein LOC100206476 [Hydra
magnipapillata]
Length = 492
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---DL 526
P+ V C +L+G C++ + C FSH P C +F C + D CP+ H
Sbjct: 174 PEKVAVCTRFLRGTCKDKN-CIFSHKFDP--NKMPVCSYFLLGQCTR-DKCPYRHVNVSS 229
Query: 527 SKYPCENFVAKGFCNRGDNCLFSHKLPPKE 556
S CE FV KGFC G+ C H L +E
Sbjct: 230 SAPICEAFV-KGFCPNGEKCTKKHTLECEE 258
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 470 PKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKY 529
P + C ++L G+C DKC + H V ++ S C F + C G+ C H L
Sbjct: 201 PNKMPVCSYFLLGQCTR-DKCPYRH--VNVSSSAPICEAFVKGFCPNGEKCTKKHTLE-- 255
Query: 530 PCENFVAKGFCNRGDNCLFSHKLPPKE 556
CE F+ G C++ +C H++ K
Sbjct: 256 -CEEFLRSGICSKRKSCRLVHRIKIKR 281
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 475 YCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPC 531
YC Y + G+C+ G+ C + HD + C F R +C K NC F H D +K P
Sbjct: 152 YCLFYSRFGKCKRGENCHYIHD----PEKVAVCTRFLRGTC-KDKNCIFSHKFDPNKMPV 206
Query: 532 ENFVAKGFCNRGDNCLFSH 550
++ G C R D C + H
Sbjct: 207 CSYFLLGQCTR-DKCPYRH 224
>gi|350296243|gb|EGZ77220.1| hypothetical protein NEUTE2DRAFT_99830 [Neurospora tetrasperma FGSC
2509]
Length = 312
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 505 ACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C H+ R C KG++C F H+ L K P C FV G+C+ GD CL+ H + P + PP
Sbjct: 98 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLH-IDPLSRLPPC 156
Query: 562 P 562
P
Sbjct: 157 P 157
>gi|326433896|gb|EGD79466.1| hypothetical protein PTSG_10032 [Salpingoeca sp. ATCC 50818]
Length = 660
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP---CENFVAKGFCNRGDNCLFSHKLPPKE 556
C +F +C +G+ CPF HD++ P C+ ++A G C+ GD C + H P K+
Sbjct: 9 CRYFVHGACTRGEQCPFSHDMAAKPDNTCKFYLA-GSCHYGDRCRYDHVRPKKK 61
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C G++C FSHD K C + SC GD C +DH
Sbjct: 9 CRYFVHGACTRGEQCPFSHDMA--AKPDNTCKFYLAGSCHYGDRCRYDH 55
>gi|85117432|ref|XP_965256.1| hypothetical protein NCU08353 [Neurospora crassa OR74A]
gi|74618745|sp|Q7SGR2.1|YTH1_NEUCR RecName: Full=mRNA 3'-end-processing protein yth-1
gi|28927062|gb|EAA36020.1| hypothetical protein NCU08353 [Neurospora crassa OR74A]
Length = 317
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 505 ACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C H+ R C KG++C F H+ L K P C FV G+C+ GD CL+ H + P + PP
Sbjct: 98 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLH-IDPLSRLPPC 156
Query: 562 P 562
P
Sbjct: 157 P 157
>gi|258572854|ref|XP_002545189.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905459|gb|EEP79860.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 350
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 37/160 (23%)
Query: 431 RSALSKEKKAKKKQKERKKRAEKNRQLGVRRL-------KLPQNLKPKTVKYCHHYLKGR 483
+SA K K A+K+++E++K A + + L K+P + PKTV C + KG
Sbjct: 46 KSADQKRKDAEKERREKEKAAAEQAKREAAELFKPVQVQKVPFGVDPKTV-LCVFFKKGS 104
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGDNCPFDHD---------LSKYP--- 530
C++G KCKFSHD K+ K + +R++ + N D+ LSK+
Sbjct: 105 CEKGKKCKFSHDPAVERKAQKKDLYSDSRDNENEKQNDTMDNWDEEKLRTVVLSKHGNPK 164
Query: 531 ------CENFVAK------GF---C-NRGDNCLFSHKLPP 554
C+ F+ G+ C N GD C++ H LPP
Sbjct: 165 TTTDKVCKYFIEAVENQKYGWFWACPNGGDKCMYKHSLPP 204
>gi|452842351|gb|EME44287.1| hypothetical protein DOTSEDRAFT_130763, partial [Dothistroma
septosporum NZE10]
Length = 192
Score = 47.8 bits (112), Expect = 0.025, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH-----DLSKY 529
C HY +G C++ + C+F+H T L + + C F+R C GD+C + H DL +
Sbjct: 2 CKHYQRGLCKKAESCEFAH-TFNL-RDERECKEFSRYGICPNGDDCTYLHVPPTSDLRRP 59
Query: 530 PCENFVAKGFCNRGDNCLFSH 550
C ++ A+GFC G C H
Sbjct: 60 ACPHY-ARGFCPLGPYCNLRH 79
Score = 39.7 bits (91), Expect = 7.2, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS---KYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
C H+ R C K ++C F H + + C+ F G C GD+C + H P + P
Sbjct: 2 CKHYQRGLCKKAESCEFAHTFNLRDERECKEFSRYGICPNGDDCTYLHVPPTSDLRRP 59
>gi|409051670|gb|EKM61146.1| hypothetical protein PHACADRAFT_134399 [Phanerochaete carnosa
HHB-10118-sp]
Length = 296
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 32/131 (24%)
Query: 476 CHHYLKGRCQEGDKCKFSHDT----VP-----------------LTKSTK----ACCHFA 510
C H+L+G C++GD+C+F H+ +P L K C +
Sbjct: 97 CKHWLRGLCKKGDQCEFLHEYNLRRMPECWWYAKYGYCSAGDECLYAHPKERRVECPDYN 156
Query: 511 RNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLP----PKEQDPPTPSTCT 566
R C G +CP H + + C+N++ GFC G C H P PK +PP P +
Sbjct: 157 RGFCKLGPSCPRKH-VRRVVCQNYLT-GFCPLGPECPRGHPKPDLPLPKAYEPPEPPS-Q 213
Query: 567 PELKPSPPLYA 577
+L P PP Y
Sbjct: 214 RDLGPPPPGYG 224
>gi|358060522|dbj|GAA93927.1| hypothetical protein E5Q_00573 [Mixia osmundae IAM 14324]
Length = 339
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 30/147 (20%)
Query: 435 SKEKKAKKKQKERKKRAEKNRQLGVRRL--KLPQNLKPKTVKYCHHYLKGRCQEGDKCKF 492
++E +A++K +E+K++AE ++ K+P + PKT+ C ++ G C++G+KCKF
Sbjct: 58 ARELEAQRKLQEQKRQAEMAELFKPVQVAQKVPFGVDPKTI-LCSYFKAGHCEKGNKCKF 116
Query: 493 SHDTVPLTKSTKACCHF-ARNSCMKGDNCPFDHD------LSKY---------PCENFV- 535
SHD K+ K + R+ +N +D + +SK+ C++F+
Sbjct: 117 SHDPNIERKAEKKDLYTDVRDKDETMEN--WDEEKLREVVMSKHGNLKTTTDIVCKHFID 174
Query: 536 ----AK-GF---CNRGDNCLFSHKLPP 554
AK GF C GD+C + H LPP
Sbjct: 175 AIEEAKYGFFWQCPSGDDCKYRHALPP 201
>gi|345781324|ref|XP_851764.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
makorin-1 [Canis lupus familiaris]
Length = 483
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 62 CSYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 117
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 62 CSYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCIYGDRCRYEH 109
>gi|326500250|dbj|BAK06214.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1031
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ ++ C ++LKG C C + H V + + AC F + C GD C
Sbjct: 813 KLTHKVLPERMQDCSYFLKGLC-TNTACPYRH--VKVNSNAPACEDFLKGYCADGDECRK 869
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
H Y C F A G C + C H
Sbjct: 870 KH---SYACPVFEATGECPQQSTCKLHH 894
>gi|241834575|ref|XP_002415006.1| makorin, putative [Ixodes scapularis]
gi|215509218|gb|EEC18671.1| makorin, putative [Ixodes scapularis]
Length = 384
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +L G C+EGD C FSH+ V C H+ R +CM G C +DH
Sbjct: 26 CRFFLSGTCREGDSCPFSHELV-AGMPDNVCRHYLRGNCMYGSRCRYDH 73
>gi|156536911|ref|XP_001607756.1| PREDICTED: zinc finger CCCH domain-containing protein 15 homolog
[Nasonia vitripennis]
Length = 406
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 32/126 (25%)
Query: 459 VRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMK 516
V+ K+ + PK+V C + +G+C +GDKCKFSHD K+ K C +++ +
Sbjct: 85 VQTQKIEKGTDPKSV-VCAFFKQGQCTKGDKCKFSHDLTVERKAEKRSLYCDMEKDADKE 143
Query: 517 GDNCPFDHDLSKY--------------PCENFVAKGF--------------CNRGDNCLF 548
DN D D K P + + K F C G C++
Sbjct: 144 ADNMD-DWDEEKLKQVVEKKHGSGGNRPTTDIICKHFLEAVEKSKYGWFWECPSGQKCIY 202
Query: 549 SHKLPP 554
H LPP
Sbjct: 203 RHALPP 208
>gi|82243428|sp|Q8JFF3.1|MKRN1_SERQU RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|22255324|dbj|BAB91214.2| gene encoding protein featuring ring-finger [Seriola
quinqueradiata]
gi|22255326|dbj|BAB91215.2| gene encoding protein featuring ring-finger [Seriola
quinqueradiata]
Length = 435
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + C F + +C+ GD C F+H
Sbjct: 24 CRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKGNCVFGDRCRFEH 72
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS-----KYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
C +F C +GDNC + HDL+ C+ F KG C GD C F H P K ++ P
Sbjct: 24 CRYFMHGLCKEGDNCRYSHDLTNSKPAAMICK-FFQKGNCVFGDRCRFEHCKPAKNEELP 82
Query: 561 TP 562
P
Sbjct: 83 AP 84
>gi|348540559|ref|XP_003457755.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2-like
[Oreochromis niloticus]
Length = 691
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG++C FSHD +K + C + R +C G+ C +DH
Sbjct: 8 CRYFLHGVCREGNRCLFSHDP-STSKPSTICKFYQRGACAYGERCRYDH 55
>gi|405118334|gb|AFR93108.1| no arches protein [Cryptococcus neoformans var. grubii H99]
Length = 332
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 38/131 (29%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHD----TVP----LTKSTKA----------------- 505
K + C HYL+ C+ GD C+++HD T+P K K
Sbjct: 94 KKLTVCKHYLRNLCKMGDNCEYTHDFNLRTMPECIWFVKQGKCELGGECLYFHPRDRRVE 153
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTC 565
C + R C+ G NCP H + + C+ + A GFC G +C +H P+P+
Sbjct: 154 CPDYNRGFCVLGPNCPRKH-IRRRLCDAYAA-GFCPDGKDCKLAH---------PSPNRP 202
Query: 566 TPE--LKPSPP 574
PE + P PP
Sbjct: 203 PPESYINPIPP 213
>gi|346471839|gb|AEO35764.1| hypothetical protein [Amblyomma maculatum]
gi|346471841|gb|AEO35765.1| hypothetical protein [Amblyomma maculatum]
Length = 283
Score = 47.8 bits (112), Expect = 0.028, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C H+L+G C++GD+C+F H+ +TK + C ++R + CPF H + ++
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-FDMTKMPE-CYFYSRFNACSNKECPFLHIDPEAKIKDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G +C H
Sbjct: 126 WYDRGFCRHGPSCRHRH 142
Score = 47.4 bits (111), Expect = 0.039, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG L P + C Y++G C + C F H T C H+ R C
Sbjct: 21 QQLGALPLPFP-GMDKSGAAVCCFYVQGNCSKASACPFRHVK---GDRTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F ++ C F H P K +D P
Sbjct: 77 KKGDQCEFLHEFDMTKMPECYFYSRFNACSNKECPFLHIDPEAKIKDCP 125
>gi|320168770|gb|EFW45669.1| ZC3H3 protein [Capsaspora owczarzaki ATCC 30864]
Length = 298
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCE 532
+ C +L+GRC D C +SH V + C +F + C G+ C H + CE
Sbjct: 1 MPVCSFFLQGRCS-NDACPYSH--VNVAPDAPVCENFVKGHCPDGELCKKKH---TFVCE 54
Query: 533 NFVAKGFCNRGDNCLFSHKLPPKEQDP 559
+F G C RG C H+ + P
Sbjct: 55 DFRRTGACPRGTKCNLQHRTAKRRAQP 81
>gi|258577983|ref|XP_002543173.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903439|gb|EEP77840.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 337
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 463 KLPQNLKPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCP 521
K P P V C +L+ G+C G C SH+ P T C HF R C + C
Sbjct: 151 KCPYIHDPNKVAICKEFLQTGKCNAGPACDLSHEPSPERSPT--CVHFLRGRCSNPE-CR 207
Query: 522 FDHDLSKYP----CENFVAKGFCNRGDNCLFSH 550
+ H + P C NF GFC++G C H
Sbjct: 208 YAH-VRVTPGAPVCRNFAILGFCDKGAECCDRH 239
>gi|328874347|gb|EGG22712.1| small MutS related family protein [Dictyostelium fasciculatum]
Length = 581
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC-MKGDNCPFDHDLSKYPCENF 534
C +++G C + C+F HD K T C +F C +KG CPF H C+ +
Sbjct: 116 CRFFMEGACV-NENCRFIHDDSVKPKVTTVCKYFLNGQCFVKG--CPFKHSRETVLCKYW 172
Query: 535 VAKGFCNRGDNCLFSHKL 552
+ C R +C+FSH++
Sbjct: 173 LRGTCCKR--DCIFSHQI 188
>gi|326529119|dbj|BAK00953.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN--SCMKGDNCPFDHDLSKYPCEN 533
C H+L+G C +GD C F H K+ C F R+ C + D C + H N
Sbjct: 61 CRHWLRGLCMKGDACGFLHQ---FDKARMPVCRFFRDYGECREPD-CAYKHSYDDVKECN 116
Query: 534 FVAKGFCNRGDNCLFSH 550
GFC G NC + H
Sbjct: 117 MYKMGFCPNGPNCRYKH 133
>gi|82268116|sp|Q4SRI6.1|MKRN1_TETNG RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|47217223|emb|CAF96746.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + C F + +C+ G+ C FDH
Sbjct: 24 CRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKGNCVFGERCRFDH 72
>gi|335286078|ref|XP_003355014.1| PREDICTED: hypothetical protein LOC100627816 [Sus scrofa]
Length = 992
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 474 KYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN-CPFDHDLSK 528
+YC +Y + GRC G C + HD + C F R +C K D CPF H +SK
Sbjct: 59 EYCMYYNRFGRCNRGQHCPYIHD----PEKVAVCTRFVRGTCKKTDGTCPFSHHVSK 111
>gi|194216707|ref|XP_001493296.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Equus caballus]
Length = 198
Score = 47.8 bits (112), Expect = 0.028, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 26/100 (26%)
Query: 476 CHHYLKGRCQEGDKCKFSH--DTVPLTK----------STKACCHFARNSCMKGDNCPF- 522
C H+L+G C++GD+CKF H D + + + K C K +CP+
Sbjct: 68 CKHWLRGLCKKGDQCKFLHQYDATRMPECYFFSKFGDCNNKECPFLHVKPAFKTRDCPWY 127
Query: 523 ------DHDLSKYP------CENFVAKGFCNRGDNCLFSH 550
D L KY C N++A GFC G C F+H
Sbjct: 128 DQGFCKDGPLCKYRHVRRTLCINYLA-GFCPEGPKCQFAH 166
Score = 45.1 bits (105), Expect = 0.17, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 499 LTKSTKACCHF-ARNSCMKGDNCPFDHDLSK--YPCENFVAKGFCNRGDNCLFSHK 551
+ KS+ A C+F A+ C KG CPF HD C++++ +G C +GD C F H+
Sbjct: 33 MDKSSSAVCNFFAKGLCEKGKLCPFRHDRGDKMVVCKHWL-RGLCKKGDQCKFLHQ 87
>gi|116199463|ref|XP_001225543.1| hypothetical protein CHGG_07887 [Chaetomium globosum CBS 148.51]
gi|88179166|gb|EAQ86634.1| hypothetical protein CHGG_07887 [Chaetomium globosum CBS 148.51]
Length = 356
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 43/168 (25%)
Query: 423 SGACNKRK---RSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHY 479
SGA KRK ++A +EKKA ++ K R+ A N+ ++ K+P + PKTV C Y
Sbjct: 46 SGAAQKRKEAEKAAREREKKAAEEAK-RETDALLNKPAQIQ--KVPFGVDPKTV-VCIFY 101
Query: 480 LKGRCQEGDKCKFSH--------DTVPLTKSTKACCHFARNSCMKGDNCPFDHD------ 525
KG C++G KCKF+H + + L + +A ++ D +D D
Sbjct: 102 KKGNCEKGKKCKFAHNLDVERKVEKINLYQDARAEEEESKKQETSAD---WDEDKLRSVV 158
Query: 526 LSK---------YPCENFVAK---------GFC-NRGDNCLFSHKLPP 554
LSK C+ F+ C N GD C++ H LPP
Sbjct: 159 LSKKGNQRTTTDKVCKFFIQAIEDGKYGWFWICPNGGDKCMYKHALPP 206
>gi|453085695|gb|EMF13738.1| hypothetical protein SEPMUDRAFT_20925, partial [Mycosphaerella
populorum SO2202]
Length = 136
Score = 47.8 bits (112), Expect = 0.028, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNC-----PFDHDLSKY 529
C HY +G C++G+ C+F+H T L + K C F+R C +GD C P ++ +
Sbjct: 40 CKHYQRGLCKKGEACEFAH-TFNL-RDEKECKEFSRYGICPQGDECTSLHIPPTAEVRRI 97
Query: 530 PCENFVAKGFCNRGDNCLFSH 550
C ++ A+GFC G C H
Sbjct: 98 ACAHY-ARGFCPLGPYCERRH 117
Score = 44.3 bits (103), Expect = 0.28, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 483 RCQEGDKCKFSHDTVPLTKSTKA---CCHFARNSCMKGDNCPFDHDLS---KYPCENFVA 536
+C G C H P +S C H+ R C KG+ C F H + + C+ F
Sbjct: 14 QCPRGPTCPDRHYVPPSERSGIGHLICKHYQRGLCKKGEACEFAHTFNLRDEKECKEFSR 73
Query: 537 KGFCNRGDNCLFSHKLPPKEQ 557
G C +GD C H +PP +
Sbjct: 74 YGICPQGDECTSLH-IPPTAE 93
>gi|294951593|ref|XP_002787058.1| hypothetical protein Pmar_PMAR006478 [Perkinsus marinus ATCC 50983]
gi|239901648|gb|EER18854.1| hypothetical protein Pmar_PMAR006478 [Perkinsus marinus ATCC 50983]
Length = 215
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCE 532
V+ C +YL G C EG+ C F+H L C CPF HD S+
Sbjct: 20 VRMCIYYLAGGCTEGENCTFAHSPEELANPKTVMCPSGAKC--TDSTCPFAHDKSELVVG 77
Query: 533 N---------FVAKGF--CNRGDNCLFSH 550
+ ++ GF CN GD C F+H
Sbjct: 78 HQRVIQQMCKYIGPGFRGCNAGDCCRFAH 106
>gi|302666419|ref|XP_003024809.1| hypothetical protein TRV_01025 [Trichophyton verrucosum HKI 0517]
gi|291188881|gb|EFE44198.1| hypothetical protein TRV_01025 [Trichophyton verrucosum HKI 0517]
Length = 472
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G C G C SHD P + + AC HF R C +C + H +
Sbjct: 297 PNKVAICKDFLQTGNCDAGVACDLSHDPCP--ERSPACLHFLRGRCTN-PSCRYTH-VHI 352
Query: 529 YP----CENFVAKGFCNRGDNCLFSH 550
P C +F G+C++G +C H
Sbjct: 353 TPGAPVCRDFAILGYCSKGASCEGRH 378
>gi|62088176|dbj|BAD92535.1| makorin, ring finger protein, 1 variant [Homo sapiens]
Length = 409
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + + + C +F R C+ GD C ++H
Sbjct: 58 CRYFMHGVCKEGDNCRYSHD-LSDSPYSVVCKYFQRGYCIYGDRCRYEH 105
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 58 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 113
>gi|37590960|dbj|BAC98837.1| Makorin1 [Seriola quinqueradiata]
Length = 418
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + C F + +C+ GD C F+H
Sbjct: 7 CRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKGNCVFGDRCRFEH 55
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 506 CCHFARNSCMKGDNCPFDHDLS-----KYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPP 560
C +F C +GDNC + HDL+ C+ F KG C GD C F H P K ++ P
Sbjct: 7 CRYFMHGLCKEGDNCRYSHDLTNSKPAAMICK-FFQKGNCVFGDRCRFEHCKPAKNEELP 65
Query: 561 TP 562
P
Sbjct: 66 AP 67
>gi|407926454|gb|EKG19421.1| Zinc finger CCCH-type protein [Macrophomina phaseolina MS6]
Length = 341
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 42/158 (26%)
Query: 436 KEKKAKKKQKE-RKKRAEKNRQLG------VRRLKLPQNLKPKTVKYCHHYLKGRCQEGD 488
K K A+K Q+E KK AE+ R+ V+ K+P + PKT+ C Y KG C +G
Sbjct: 52 KRKDAEKAQREAEKKAAEQARKEAAELFKPVQVQKVPFGVDPKTI-LCQFYKKGHCDKGK 110
Query: 489 KCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP------------------ 530
KCKFSHD K+ K + ++ ++ + D+S +
Sbjct: 111 KCKFSHDLAIERKTEKKSLYA--DTRENEEDAKKNDDMSNWDEEKLRDVVKSKHGNPRTT 168
Query: 531 ----CENFVAK------GF---C-NRGDNCLFSHKLPP 554
C+ F+ G+ C N GD C++ H LPP
Sbjct: 169 TDKVCKYFIEAIENQKYGWFWTCPNGGDKCMYRHALPP 206
>gi|58263406|ref|XP_569113.1| no arches protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134108566|ref|XP_777234.1| hypothetical protein CNBB4640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819807|sp|P0CS65.1|YTH1_CRYNB RecName: Full=mRNA 3'-end-processing protein YTH1
gi|338819808|sp|P0CS64.1|YTH1_CRYNJ RecName: Full=mRNA 3'-end-processing protein YTH1
gi|50259919|gb|EAL22587.1| hypothetical protein CNBB4640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223763|gb|AAW41806.1| no arches protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 332
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 31/128 (24%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHD----TVP----LTKSTKA----------------- 505
K + C HYL+ C+ GD C+++HD T+P K K
Sbjct: 94 KKLTVCKHYLRNLCKMGDNCEYTHDFNLRTMPVCIWFVKQGKCELGGECLYFHPRDRRVE 153
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTC 565
C + R C+ G NCP H + + C+ + A GFC G +C +H P PP S
Sbjct: 154 CPDYNRGFCVLGPNCPRKH-IRRRLCDAYAA-GFCPDGKDCKLAH---PSPNRPPAESYI 208
Query: 566 TPELKPSP 573
P + P P
Sbjct: 209 NP-IPPDP 215
>gi|392589907|gb|EIW79237.1| hypothetical protein CONPUDRAFT_167020 [Coniophora puteana
RWD-64-598 SS2]
Length = 725
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 498 PLTKSTKACCHF--ARNSCMKGDNCPFDHD----LSKY----PCENFVAKGFCNRGDNCL 547
P T + C + R C GD C F H L+ Y PC+ F AKG C++GD C
Sbjct: 4 PATSKARGVCKYYDTRRGCYAGDTCKFLHGADERLTPYDKSKPCK-FYAKGHCSKGDKCW 62
Query: 548 FSHKL 552
F H L
Sbjct: 63 FQHDL 67
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Query: 469 KPKTVK---YCHHYLKGR-CQEGDKCKFSHDT----VPLTKSTKACCHFARNSCMKGDNC 520
+P T K C +Y R C GD CKF H P KS K C +A+ C KGD C
Sbjct: 3 RPATSKARGVCKYYDTRRGCYAGDTCKFLHGADERLTPYDKS-KPCKFYAKGHCSKGDKC 61
Query: 521 PFDHDLS 527
F HDL+
Sbjct: 62 WFQHDLA 68
>gi|46126751|ref|XP_387929.1| hypothetical protein FG07753.1 [Gibberella zeae PH-1]
Length = 781
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 466 QNLKPKTVKY---CHHYLKGRCQEGDKCKFSHDTVPLTKS---TKACCHFARNSCMKGDN 519
QN + ++Y C Y +G C G C+FSH + T + K C F R C +GD
Sbjct: 42 QNREVSRIQYTRPCFAYARGECFRGTACRFSHAGITNTTTGNIRKPCRFFTRGHCRRGDA 101
Query: 520 CPFDHDLS 527
C F HD S
Sbjct: 102 CNFSHDRS 109
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 492 FSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---------DLSKYPCENFVAKGFCNR 542
F + V + T+ C +AR C +G C F H ++ K PC F +G C R
Sbjct: 41 FQNREVSRIQYTRPCFAYARGECFRGTACRFSHAGITNTTTGNIRK-PCR-FFTRGHCRR 98
Query: 543 GDNCLFSH 550
GD C FSH
Sbjct: 99 GDACNFSH 106
>gi|336272240|ref|XP_003350877.1| hypothetical protein SMAC_07683 [Sordaria macrospora k-hell]
gi|380089746|emb|CCC14919.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 655
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 491 KFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP---CENFVAKGFCNRGDNCL 547
+F H P S C F + +C G CPF HDLS C+ F AKG C G C
Sbjct: 53 RFDHSRSPPNTSHVPCKFFRQGACQAGSACPFSHDLSAAAETVCKYF-AKGNCKFGPKCA 111
Query: 548 FSHKLP 553
H LP
Sbjct: 112 NIHVLP 117
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACC-HFARNSCMKGDNCPFDHDL 526
C + +G CQ G C FSHD L+ + + C +FA+ +C G C H L
Sbjct: 68 CKFFRQGACQAGSACPFSHD---LSAAAETVCKYFAKGNCKFGPKCANIHVL 116
>gi|357123412|ref|XP_003563404.1| PREDICTED: zinc finger CCCH domain-containing protein 45-like
[Brachypodium distachyon]
Length = 653
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN--SCMKGDNCPFDHDLSKYPCEN 533
C H+L+G C +G+ C F H K+ C F R+ C + D C + H N
Sbjct: 57 CRHWLRGLCMKGEACGFLHQ---FDKARMPVCRFFRDFGECREPD-CAYKHSYDDVKECN 112
Query: 534 FVAKGFCNRGDNCLFSH 550
GFC G +C + H
Sbjct: 113 MYKMGFCPNGPHCRYKH 129
>gi|392332511|ref|XP_003752602.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Rattus norvegicus]
Length = 247
Score = 47.4 bits (111), Expect = 0.031, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQE----GDKCKFSHDTVPLTKSTKACCHFA 510
+QLG + L P K T C +LK C + G C F H + + T C H+
Sbjct: 21 QQLGAQPLPFPGMDKSGTA-VCEFFLKAACGKVQLLGGMCPFRHIS---GEKTVVCKHWL 76
Query: 511 RNSCMKGDNCPFDH--DLSKYPCENFVAK-GFCNRGDNCLFSHKLP-PKEQDPP 560
R C KGD C F H D++K P F +K G C+ + C F H P K +D P
Sbjct: 77 RGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDPESKIKDCP 129
Score = 42.0 bits (97), Expect = 1.4, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 29/106 (27%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK-------------STKACCHFARNSCMKG 517
KTV C H+L+G C++GD+C+F H+ +TK S K C + K
Sbjct: 68 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPESKI 125
Query: 518 DNCP-FDHDLSKYP------------CENFVAKGFCNRGDNCLFSH 550
+CP +D K+ C N++ GFC G +C F H
Sbjct: 126 KDCPWYDRGFCKHGPLCRHRRTRRVICVNYLV-GFCPEGPSCKFMH 170
>gi|432870755|ref|XP_004071832.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Oryzias latipes]
Length = 265
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C ++KG C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGSAVCEFFMKGTCMKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 33/122 (27%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDT---------------------VPLTK-----STK 504
KTV C H+L+G C++GD+C+F H+ P K
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIK 122
Query: 505 ACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQDPP 560
C + R C G +C H + C N++ GFC G +C F H +LP + PP
Sbjct: 123 DCPWYDRGFCKHGPDCRHRHT-RRVICVNYLV-GFCPEGKSCKFMHPRFELPMGTSEQPP 180
Query: 561 TP 562
P
Sbjct: 181 LP 182
>gi|320163586|gb|EFW40485.1| zinc finger family protein [Capsaspora owczarzaki ATCC 30864]
Length = 581
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 467 NLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+L PK+ CH++++G C KC+FSHD ST C + + +C G C F+H
Sbjct: 3 SLLPKSSVLCHYFMQGNCSFNTKCQFSHDKSAARPST-ICKFYVQGNCTYGTRCHFNH 59
>gi|85076493|ref|XP_955934.1| hypothetical protein NCU05007 [Neurospora crassa OR74A]
gi|28916967|gb|EAA26698.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 666
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 491 KFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP---CENFVAKGFCNRGDNCL 547
+F H P S C F + +C G CPF HDLS C+ F AKG C G C
Sbjct: 52 RFDHSRSPPNTSHVPCKFFRQGACQAGSACPFSHDLSAAAETVCKYF-AKGNCKFGPKCA 110
Query: 548 FSHKLP 553
H LP
Sbjct: 111 NIHVLP 116
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACC-HFARNSCMKGDNCPFDHDL 526
C + +G CQ G C FSHD L+ + + C +FA+ +C G C H L
Sbjct: 67 CKFFRQGACQAGSACPFSHD---LSAAAETVCKYFAKGNCKFGPKCANIHVL 115
>gi|118344564|ref|NP_001072050.1| probable E3 ubiquitin-protein ligase makorin-1 [Takifugu rubripes]
gi|75570704|sp|Q5NU14.1|MKRN1_TAKRU RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|56709991|dbj|BAD80899.1| makorin RING zinc finger protein 1a [Takifugu rubripes]
Length = 429
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + C F + +C+ G+ C F+H
Sbjct: 24 CRYFMHGLCKEGDNCRYSHDLTSSKPAAMMCKFFQKGNCVFGERCRFEH 72
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 496 TVPLTKSTK---ACCHFARNSCMKGDNCPFDHDL-SKYPCE---NFVAKGFCNRGDNCLF 548
T+P+T C +F C +GDNC + HDL S P F KG C G+ C F
Sbjct: 11 TLPVTGGWTKHVTCRYFMHGLCKEGDNCRYSHDLTSSKPAAMMCKFFQKGNCVFGERCRF 70
Query: 549 SHKLPPKEQDPPTPSTCTPELKPSP 573
H P K ++ P P P
Sbjct: 71 EHCKPTKSEEVSNPQMLLLSSTPPP 95
>gi|344229129|gb|EGV61015.1| hypothetical protein CANTEDRAFT_116139 [Candida tenuis ATCC 10573]
gi|344229130|gb|EGV61016.1| hypothetical protein CANTEDRAFT_116139 [Candida tenuis ATCC 10573]
Length = 193
Score = 47.4 bits (111), Expect = 0.032, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D C+F H+ + C ++RN C + + C + H SK P C
Sbjct: 70 CKHWLRGLCKKNDHCEFLHEYN--LRKMPECLFYSRNGYCTQTNECLYLHVDPQSKIPEC 127
Query: 532 ENFVAKGFCNRGDNCLFSH 550
+N++ +GFC G C+ H
Sbjct: 128 QNYL-RGFCPEGPKCVNRH 145
Score = 43.5 bits (101), Expect = 0.46, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G C H P+ + C H+ R C K D+C F H+ L K P C + G+C
Sbjct: 49 CPNGSNCPNKH-VPPMYNNKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFYSRNGYC 107
Query: 541 NRGDNCLFSHKLPPKEQDP 559
+ + CL+ H + P+ + P
Sbjct: 108 TQTNECLYLH-VDPQSKIP 125
>gi|302507150|ref|XP_003015536.1| hypothetical protein ARB_05847 [Arthroderma benhamiae CBS 112371]
gi|291179104|gb|EFE34891.1| hypothetical protein ARB_05847 [Arthroderma benhamiae CBS 112371]
Length = 491
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G C G C SHD P + + AC HF R C +C + H +
Sbjct: 316 PNKVAICKDFLQTGNCDAGVACDLSHDPCP--ERSPACLHFLRGRCTN-PSCRYTH-VHI 371
Query: 529 YP----CENFVAKGFCNRGDNCLFSH 550
P C +F G+C++G +C H
Sbjct: 372 TPGAPVCRDFAILGYCSKGASCEGRH 397
>gi|312381814|gb|EFR27467.1| hypothetical protein AND_05814 [Anopheles darlingi]
Length = 440
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 28/119 (23%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCP- 521
KL PK+V C + +G C +GDKCKFSHD KS K HF D
Sbjct: 89 KLEVGADPKSV-LCAFFKQGTCTKGDKCKFSHDLAVERKSEKRSIHFDMRDADANDTIEN 147
Query: 522 -FDHDLSK-----------YPCENFVAKGF--------------CNRGDNCLFSHKLPP 554
+ LS+ P + K F C G+ C++ H LPP
Sbjct: 148 WTEEKLSEVVAKKHGKEKTMPSTTIICKYFLDAVERSLYGWFWECPNGEKCIYRHALPP 206
>gi|408390269|gb|EKJ69673.1| hypothetical protein FPSE_10157 [Fusarium pseudograminearum CS3096]
Length = 358
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 39/161 (24%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGR 483
+A K+K+A+K +ER+K+A ++ + + + K+P + PKTV C Y KG
Sbjct: 50 TAEEKKKQAEKAAREREKKAAEDAKRDMEAMINRPAQIQKVPFGVDPKTV-VCIFYKKGN 108
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNS-----CMKGDNCPFDHD------LSKYP-- 530
C++G KCKFSHD K+ K + + + +D D LSK
Sbjct: 109 CEKGKKCKFSHDLSVERKTEKKNLYTDKRGEEEETKKVETSADWDEDKLRSVVLSKKGNQ 168
Query: 531 -------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C + H LPP
Sbjct: 169 QTTTDKVCKFFIEAIEDGKYGWFWICPNGGDKCKYKHALPP 209
>gi|156064751|ref|XP_001598297.1| hypothetical protein SS1G_00383 [Sclerotinia sclerotiorum 1980]
gi|154691245|gb|EDN90983.1| hypothetical protein SS1G_00383 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 463
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 474 KYCH-HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLSKYPC 531
K C+ HYL+G C +GD+C F HD + KA + R N C+ G +C + + + C
Sbjct: 360 KLCNNHYLRGPCSKGDECCFEHDHKATEEEIKAIAYLTRQNPCVNGQDCDNEECIYGHHC 419
Query: 532 ENFVAKGFCNRGDNCL-FSHKLPPKEQDPP 560
+ V ++ C+ F+ K KE PP
Sbjct: 420 PSVVIPSIGSKEPTCMAFACKF-YKEDHPP 448
>gi|383862768|ref|XP_003706855.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Megachile rotundata]
Length = 286
Score = 47.4 bits (111), Expect = 0.034, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 462 LKLP-QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
L LP + T C Y +G C +G C F H T C H+ R C KGD C
Sbjct: 26 LPLPFTGMDKSTAAVCQFYPRGTCVKGASCPFRHVR---GDRTIVCKHWLRGLCKKGDQC 82
Query: 521 PFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
F H D++K P F ++ C F H P K +D P
Sbjct: 83 EFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETKVRDCP 125
Score = 45.8 bits (107), Expect = 0.098, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C H+L+G C++GD+C+F H+ +TK + C ++R + CPF H + +
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSRFNACHNKECPFLHIDPETKVRDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 126 WYDRGFCRHGPLCRHRH 142
>gi|336276075|ref|XP_003352791.1| hypothetical protein SMAC_01625 [Sordaria macrospora k-hell]
gi|380094679|emb|CCC08061.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 321
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 505 ACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C H+ R C KG++C F H+ L K P C FV G+C+ GD CL+ H + P + PP
Sbjct: 101 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLH-IDPLSRLPPC 159
Query: 562 P 562
P
Sbjct: 160 P 160
>gi|66517749|ref|XP_396082.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Apis mellifera]
gi|380029307|ref|XP_003698318.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Apis florea]
Length = 286
Score = 47.4 bits (111), Expect = 0.034, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 462 LKLP-QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
L LP + T C Y +G C +G C F H T C H+ R C KGD C
Sbjct: 26 LPLPFTGMDKSTAAVCQFYPRGTCVKGASCPFRHVR---GDRTIVCKHWLRGLCKKGDQC 82
Query: 521 PFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
F H D++K P F ++ C F H P K +D P
Sbjct: 83 EFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETKVRDCP 125
Score = 45.8 bits (107), Expect = 0.098, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C H+L+G C++GD+C+F H+ +TK + C ++R + CPF H + +
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSRFNACHNKECPFLHIDPETKVRDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 126 WYDRGFCRHGPLCRHRH 142
>gi|345322050|ref|XP_001508229.2| PREDICTED: E3 ubiquitin-protein ligase makorin-1-like
[Ornithorhynchus anatinus]
Length = 246
Score = 47.4 bits (111), Expect = 0.034, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG+ C++SHD +S+ C + R C GD C ++H
Sbjct: 83 CRYFLHGVCKEGNGCRYSHDLCA-GQSSMVCRFYQRGGCAYGDRCRYEH 130
>gi|326482641|gb|EGE06651.1| CCCH zinc finger protein [Trichophyton equinum CBS 127.97]
Length = 444
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G+C G C SHD P + + AC HF R C +C + H +
Sbjct: 269 PNKVAICKDFLQTGKCDAGVACDLSHDPSP--ERSPACLHFLRGRCTN-PSCRYTH-VHI 324
Query: 529 YP----CENFVAKGFCNRGDNC--LFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLK 582
P C +F G+C++G +C H+ P D C + P P + + ++
Sbjct: 325 TPGASVCRDFAILGYCSKGASCEGRHVHECP----DYANTGNCGNKKCPLPHVDRAGQIR 380
Query: 583 PLNNNKV 589
NKV
Sbjct: 381 KFTANKV 387
>gi|330913099|ref|XP_003296186.1| hypothetical protein PTT_05287 [Pyrenophora teres f. teres 0-1]
gi|311331882|gb|EFQ95722.1| hypothetical protein PTT_05287 [Pyrenophora teres f. teres 0-1]
Length = 588
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
R++G + P N K + C Y +G CQ G C F H PLT+ C +F + +C
Sbjct: 27 REMGFAGPRSPPNNKNTSHVPCKFYRQGACQAGKACPFLHSDEPLTERAP-CKYFTKGNC 85
Query: 515 MKGDNCPFDHDL 526
G C H L
Sbjct: 86 KFGQKCALAHIL 97
>gi|46138629|ref|XP_391005.1| hypothetical protein FG10829.1 [Gibberella zeae PH-1]
Length = 358
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 39/161 (24%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGR 483
+A K+K+A+K +ER+K+A ++ + + + K+P + PKTV C Y KG
Sbjct: 50 TAEEKKKQAEKAAREREKKAAEDAKRDMEAMINRPAQIQKVPFGVDPKTV-VCIFYKKGN 108
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNS-----CMKGDNCPFDHD------LSKYP-- 530
C++G KCKFSHD K+ K + + + +D D LSK
Sbjct: 109 CEKGKKCKFSHDLSVERKTEKKNLYTDKRGEEEETKKVETSADWDEDKLRSVVLSKKGNQ 168
Query: 531 -------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C + H LPP
Sbjct: 169 QTTTDKVCKFFIEAIEDGKYGWFWICPNGGDKCKYKHALPP 209
>gi|326470091|gb|EGD94100.1| CCCH zinc finger protein [Trichophyton tonsurans CBS 112818]
Length = 444
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G+C G C SHD P + + AC HF R C +C + H +
Sbjct: 269 PNKVAICKDFLQTGKCDAGVACDLSHDPSP--ERSPACLHFLRGRCTN-PSCRYTH-VHI 324
Query: 529 YP----CENFVAKGFCNRGDNC--LFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLK 582
P C +F G+C++G +C H+ P D C + P P + + ++
Sbjct: 325 TPGASVCRDFAILGYCSKGASCEGRHVHECP----DYANTGNCGNKKCPLPHVDRAGQIR 380
Query: 583 PLNNNKV 589
NKV
Sbjct: 381 KFTANKV 387
>gi|336466760|gb|EGO54925.1| hypothetical protein NEUTE1DRAFT_88572 [Neurospora tetrasperma FGSC
2508]
gi|350286336|gb|EGZ67583.1| hypothetical protein NEUTE2DRAFT_95351 [Neurospora tetrasperma FGSC
2509]
Length = 666
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 491 KFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP---CENFVAKGFCNRGDNCL 547
+F H P S C F + +C G CPF HDLS C+ F AKG C G C
Sbjct: 52 RFDHSRSPPNTSHVPCKFFRQGACQAGSACPFSHDLSAAAETVCKYF-AKGNCKFGPKCA 110
Query: 548 FSHKLP 553
H LP
Sbjct: 111 NIHVLP 116
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACC-HFARNSCMKGDNCPFDHDL 526
C + +G CQ G C FSHD L+ + + C +FA+ +C G C H L
Sbjct: 67 CKFFRQGACQAGSACPFSHD---LSAAAETVCKYFAKGNCKFGPKCANIHVL 115
>gi|401827867|ref|XP_003888226.1| putative zinc finger protein [Encephalitozoon hellem ATCC 50504]
gi|392999426|gb|AFM99245.1| putative zinc finger protein [Encephalitozoon hellem ATCC 50504]
Length = 119
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 503 TKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
T C F NSC GDNC + H+ SK+PC+ F + C R D C FSH
Sbjct: 45 TILCKFFLMNSCKHGDNCTYSHNTSKFPCKAFHIRKNCIRKD-CPFSH 91
>gi|380811254|gb|AFE77502.1| E3 ubiquitin-protein ligase makorin-1 isoform 2 [Macaca mulatta]
Length = 329
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + + + C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD-LSDSPYSVVCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|413943365|gb|AFW76014.1| hypothetical protein ZEAMMB73_244879 [Zea mays]
Length = 251
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN--SCMKGDNCPFDHDLSKYPCEN 533
C H+L+G C +G+ C F H K+ C F R+ C + D C + H N
Sbjct: 62 CRHWLRGLCMKGEACGFLHQ---FDKARMPVCRFFRDFGECREPD-CAYKHSYDDVKECN 117
Query: 534 FVAKGFCNRGDNCLFSH-KLP 553
GFC G NC + H KLP
Sbjct: 118 MYKMGFCPNGPNCRYKHIKLP 138
>gi|383417145|gb|AFH31786.1| E3 ubiquitin-protein ligase makorin-1 isoform 2 [Macaca mulatta]
Length = 329
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + + + C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD-LSDSPYSVVCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|358060294|dbj|GAA94048.1| hypothetical protein E5Q_00695 [Mixia osmundae IAM 14324]
Length = 440
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 388 ISSFSASLDDSTVQKEVVKQRVTQEQGITTKD----KLDSGACNKRKRSALSKEKKAKKK 443
++S SA++ T ++ ++ +Q I TK + D+ A + + ++ L ++
Sbjct: 138 VASTSATVGSLTPKRASIQG----QQYIRTKTGNLVRADAYAAHVKSQANLKAKRARLDT 193
Query: 444 QKERKKRAEKNRQLGV---RRLKLPQNLKPKTVKYCHHY-LKGRCQEGDKCKFSHDTVPL 499
+ R + +R G +R+ P + K C Y ++G+C +G C + HD +
Sbjct: 194 LVGQLGRVQPSRNRGSTRGKRVPRPVITRQKINSLCPQYTIQGQCTKGLTCPYIHDPTKV 253
Query: 500 TKSTKACCHFARNSCMKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSH 550
+ C F N C G++C H D + P C +F CNRG +C F H
Sbjct: 254 S----ICTRFLANKCELGESCLHSHSTDAHRMPHCTHFPR---CNRGRDCPFPH 300
>gi|156034326|ref|XP_001585582.1| hypothetical protein SS1G_13466 [Sclerotinia sclerotiorum 1980]
gi|154698869|gb|EDN98607.1| hypothetical protein SS1G_13466 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 362
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 53/140 (37%), Gaps = 59/140 (42%)
Query: 459 VRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHD----------------------- 495
V+ K+P + PKTV C Y KG C++G KCKFSHD
Sbjct: 85 VQVQKVPFGVDPKTV-LCQFYKKGHCEKGRKCKFSHDLNIERKTTKIDLAQDPREAEAEK 143
Query: 496 ---------------TVPLTK------STKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
+V L+K +T+ C F ++ +G F + C
Sbjct: 144 RKEETSDDWDEEKLRSVVLSKKGNQKTTTEKVCKFFIDAVEEGKYGWF------WTCP-- 195
Query: 535 VAKGFCNRGDNCLFSHKLPP 554
N GD C++ HKLPP
Sbjct: 196 ------NGGDKCMYQHKLPP 209
>gi|223468622|ref|NP_001138597.1| E3 ubiquitin-protein ligase makorin-1 isoform 2 [Homo sapiens]
gi|89885440|emb|CAJ84705.1| makorin-1 [Homo sapiens]
Length = 329
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + + + C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD-LSDSPYSVVCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|332028091|gb|EGI68142.1| Cleavage and polyadenylation specificity factor subunit 4
[Acromyrmex echinatior]
Length = 290
Score = 47.4 bits (111), Expect = 0.036, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C Y KG C +G C F H T C H+ R C KGD C F H D++K P
Sbjct: 41 CQFYPKGSCNKGASCPFRHVR---GDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 97
Query: 534 FVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
F ++ C F H P K +D P
Sbjct: 98 FYSRFNACHNKECPFLHIDPETKVRDCP 125
Score = 45.4 bits (106), Expect = 0.13, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C H+L+G C++GD+C+F H+ +TK + C ++R + CPF H + +
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSRFNACHNKECPFLHIDPETKVRDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 126 WYDRGFCRHGPLCRHRH 142
>gi|440294366|gb|ELP87383.1| hypothetical protein EIN_096400 [Entamoeba invadens IP1]
Length = 239
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 22/72 (30%)
Query: 503 TKACCHFARNS-CMKGDNCPFDHDLSKY---------------------PCENFVAKGFC 540
TK C F +N C KGDNC F HD+S PC+ F G C
Sbjct: 157 TKPCIFFMQNGYCKKGDNCTFSHDVSTTHSTNTSPQKQFVSVDKLYRTKPCKYFFETGTC 216
Query: 541 NRGDNCLFSHKL 552
+G++C FSH L
Sbjct: 217 RKGEHCNFSHDL 228
>gi|302412591|ref|XP_003004128.1| translation machinery-associated protein [Verticillium albo-atrum
VaMs.102]
gi|261356704|gb|EEY19132.1| translation machinery-associated protein [Verticillium albo-atrum
VaMs.102]
Length = 355
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 67/157 (42%), Gaps = 39/157 (24%)
Query: 436 KEKKAKKKQKERKKRA--EKNRQLG------VRRLKLPQNLKPKTVKYCHHYLKGRCQEG 487
K K+A+K Q+E++KRA E R+L + K+P + PKTV C + KG C++G
Sbjct: 54 KRKQAEKAQREKEKRAAEEAKRELADLVNKPAQIQKVPFGVDPKTV-VCIFFKKGNCEKG 112
Query: 488 DKCKFSHDTVPLTKSTKACCHF---ARNSCMKGDNCPFDHD--------LSKYP------ 530
KCKFSH+ K K + A K + D LSK
Sbjct: 113 KKCKFSHNVEDERKVNKKSLYTDTRAEEDEQKKVETSAEWDEEKLRSVVLSKKGNQKTTT 172
Query: 531 ---CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ FV C N GD C++ H LPP
Sbjct: 173 DKVCKFFVEAIEEGKYGWFWVCPNGGDKCMYKHALPP 209
>gi|147801246|emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]
Length = 913
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 32/112 (28%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP----- 530
C+ +LKG+C G CKFSH H A S + D DH+ + P
Sbjct: 281 CNDFLKGKCHRGSSCKFSH-------------HGA--SGDRYDRHDRDHERKREPHRVGG 325
Query: 531 --CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNL 580
C+ F A G C GD C FSH PP + +PE +P + NL
Sbjct: 326 ILCKYF-AMGKCFNGDRCRFSHDDPPCD---------SPEGRPRDGKWGHNL 367
>gi|67541504|ref|XP_664526.1| hypothetical protein AN6922.2 [Aspergillus nidulans FGSC A4]
gi|40738487|gb|EAA57677.1| hypothetical protein AN6922.2 [Aspergillus nidulans FGSC A4]
gi|259480527|tpe|CBF71743.1| TPA: CCCH finger DNA binding protein, putative (AFU_orthologue;
AFUA_5G13930) [Aspergillus nidulans FGSC A4]
Length = 340
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 38/161 (23%)
Query: 431 RSALSKEKKAKKKQKERKKRAEKNRQLGVRRL-------KLPQNLKPKTVKYCHHYLKGR 483
++A K K A+K+++E +KRA + + L K+P + PKTV C Y +G
Sbjct: 46 KTADEKRKAAEKERREAEKRAAEQAKKEALELFKPVQVQKVPFGVDPKTV-LCQFYKQGH 104
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHF----ARNSCMKGDNCP-FDHD------LSKYP-- 530
C++G KCKFSHD K+ K + A + K D +D LSK+
Sbjct: 105 CEKGRKCKFSHDLNVDRKAAKKDLYTDSREAEDEKKKADTMEQWDEAKLRSVVLSKHGNP 164
Query: 531 -------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C++ H LPP
Sbjct: 165 RTTTDKVCKYFIEAVENQKYGWFWVCPNGGDKCMYKHSLPP 205
>gi|340719465|ref|XP_003398174.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Bombus terrestris]
gi|350410464|ref|XP_003489048.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Bombus impatiens]
Length = 286
Score = 47.4 bits (111), Expect = 0.037, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 462 LKLP-QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC 520
L LP + T C Y +G C +G C F H T C H+ R C KGD C
Sbjct: 26 LPLPFTGMDKSTAAVCQFYPRGTCVKGASCPFRHVR---GDRTIVCKHWLRGLCKKGDQC 82
Query: 521 PFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
F H D++K P F ++ C F H P K +D P
Sbjct: 83 EFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETKVRDCP 125
Score = 45.8 bits (107), Expect = 0.11, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C H+L+G C++GD+C+F H+ +TK + C ++R + CPF H + +
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSRFNACHNKECPFLHIDPETKVRDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 126 WYDRGFCRHGPLCRHRH 142
>gi|401398682|ref|XP_003880376.1| zinc finger (CCCH type) protein, related, partial [Neospora caninum
Liverpool]
gi|325114786|emb|CBZ50342.1| zinc finger (CCCH type) protein, related [Neospora caninum
Liverpool]
Length = 1330
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 462 LKLPQNLKPKTV-------KYCHHYLKGRCQEGDKCKFSHD-----TVPLTKSTKACCHF 509
+ +P +L+ T+ K C +GRC+ G C+F+H T P T+ C F
Sbjct: 8 ILVPASLRGSTISTIFFKTKMCRFLRQGRCKHGPSCQFAHSPEELRTPPNLAKTRLCRAF 67
Query: 510 ARNSCMKGDNCPFDHDL 526
C +G+NC F H L
Sbjct: 68 REGRCDRGENCAFAHGL 84
>gi|225457763|ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267803 [Vitis vinifera]
Length = 913
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 32/112 (28%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP----- 530
C+ +LKG+C G CKFSH H A S + D DH+ + P
Sbjct: 281 CNDFLKGKCHRGSSCKFSH-------------HGA--SGDRYDRHDRDHERKREPHRVGG 325
Query: 531 --CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNL 580
C+ F A G C GD C FSH PP + +PE +P + NL
Sbjct: 326 ILCKYF-AMGKCFNGDRCRFSHDDPPCD---------SPEGRPRDGKWGHNL 367
>gi|145229947|ref|XP_001389282.1| CCCH zinc finger and SMR domain protein [Aspergillus niger CBS
513.88]
gi|134055395|emb|CAK43949.1| unnamed protein product [Aspergillus niger]
gi|350638356|gb|EHA26712.1| hypothetical protein ASPNIDRAFT_205772 [Aspergillus niger ATCC
1015]
Length = 740
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
C ++L G+C D C+FSHD + C ++ +C+ GD CPF HD S
Sbjct: 285 CKYWLSTGQCLRAD-CRFSHDL-----TNHLCKYWVMGNCLAGDGCPFSHDPSALVANLS 338
Query: 535 VAKG 538
VA G
Sbjct: 339 VADG 342
>gi|157279867|ref|NP_001098449.1| E3 ubiquitin-protein ligase makorin-1 [Bos taurus]
gi|124829161|gb|AAI33457.1| MKRN1 protein [Bos taurus]
Length = 340
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 73 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 128
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 73 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCIYGDRCRYEH 120
>gi|6563240|gb|AAF17214.1|AF117233_1 znf-xp protein [Homo sapiens]
Length = 328
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + + + C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD-LSDSPYSVVCKYFQRGYCIYGDRCRYEH 108
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|170086694|ref|XP_001874570.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649770|gb|EDR14011.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 398
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 470 PKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P + C ++L+G C + + C SHD P + T C HF CPF H
Sbjct: 222 PSKIAICWNFLQGNCTKTAETCDLSHDPTP--ERTPLCLHFLNKGRCTRQRCPFPHVNVG 279
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
+ C +F G+C RG +C
Sbjct: 280 TRQGVCRDFAVLGYCERGLDC 300
>gi|259486862|tpe|CBF85065.1| TPA: CCCH zinc finger protein (AFU_orthologue; AFUA_8G05480)
[Aspergillus nidulans FGSC A4]
Length = 467
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G+C G+ C SH+ P + AC HF R C + C + H +
Sbjct: 296 PNKVAICKDFLQTGKCSAGNSCDLSHEPSP--HRSPACVHFLRGRCSNPE-CRYAH-VRV 351
Query: 529 YP----CENFVAKGFCNRGDNCLFSH 550
P C F G+C++G+ C H
Sbjct: 352 TPGAPVCRAFATLGYCDKGETCEERH 377
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 513 SCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPP 554
+C KG +CP+ HD +K C++F+ G C+ G++C SH+ P
Sbjct: 283 TCYKGPSCPYIHDPNKVAICKDFLQTGKCSAGNSCDLSHEPSP 325
>gi|389751127|gb|EIM92200.1| hypothetical protein STEHIDRAFT_47086 [Stereum hirsutum FP-91666
SS1]
Length = 296
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 32/131 (24%)
Query: 476 CHHYLKGRCQEGDKCKFSHDT----VP-----------------LTKSTK----ACCHFA 510
C H+L+G C++GD C+F H+ +P L K C +
Sbjct: 95 CKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLYAHPKERKVECPDYK 154
Query: 511 RNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHK----LPPKEQDPPTPSTCT 566
R C G CP H + + C+ ++ GFC G +C H PPK DPP P +
Sbjct: 155 RGFCKLGPKCPRKH-IRRVACQLYLT-GFCPLGPDCPRGHPKPNIPPPKAYDPPEPPSHR 212
Query: 567 PELKPSPPLYA 577
+L P PP Y
Sbjct: 213 -DLGPPPPGYG 222
>gi|255080914|ref|XP_002504023.1| predicted protein [Micromonas sp. RCC299]
gi|226519290|gb|ACO65281.1| predicted protein [Micromonas sp. RCC299]
Length = 227
Score = 47.4 bits (111), Expect = 0.040, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +Y+ G C +G C+FSHD + KST C ++ +C GD C +DH
Sbjct: 6 CKYYMHGACNKGAACRFSHD-IQAPKST-VCTYYLAGNCSYGDKCRYDH 52
Score = 44.3 bits (103), Expect = 0.33, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 502 STKACCHFARNSCMKGDNCPFDHDLS--KYPCENFVAKGFCNRGDNCLFSHKLPPKEQDP 559
S + C ++ +C KG C F HD+ K + G C+ GD C + H P Q P
Sbjct: 2 SREICKYYMHGACNKGAACRFSHDIQAPKSTVCTYYLAGNCSYGDKCRYDHVRPAGIQGP 61
Query: 560 PTPSTCTPELKPSPPL 575
P +P+PP+
Sbjct: 62 PAGLN-----RPAPPM 72
>gi|413934440|gb|AFW68991.1| hypothetical protein ZEAMMB73_893936 [Zea mays]
Length = 246
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN--SCMKGDNCPFDHDLSKYPCEN 533
C H+L+G C +G+ C F H K+ C F R+ C + D C + H N
Sbjct: 57 CRHWLRGLCMKGEACGFLHQ---FDKARMPVCRFFRDFGECREPD-CAYKHSYDDVKECN 112
Query: 534 FVAKGFCNRGDNCLFSH-KLP 553
GFC G NC + H KLP
Sbjct: 113 MYKMGFCPNGPNCRYKHIKLP 133
>gi|326912239|ref|XP_003202461.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Meleagris
gallopavo]
Length = 464
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCK 491
+A+SK E N ++G+++ +L +++ G C+EGD C+
Sbjct: 10 TAVSKAASVLSNAAELLSSVCLNHRMGIQKFQLDSGSMGL------YFMHGVCKEGDNCR 63
Query: 492 FSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+SHD + ++S C ++ R C GD+C ++H
Sbjct: 64 YSHD-LSTSQSAMVCRYYQRGCCAYGDHCRYEH 95
>gi|393240579|gb|EJD48105.1| hypothetical protein AURDEDRAFT_144350 [Auricularia delicata
TFB-10046 SS5]
Length = 860
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 26/205 (12%)
Query: 504 KACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKE----QDP 559
+ C +F C++ D C F HD+ + C F +G C + +NC F H LP + +D
Sbjct: 477 RVCRYFLAGECLRAD-CKFSHDIERAMCR-FWLRGTCAKQENCEFLHHLPEQWDSSVKDT 534
Query: 560 PTPSTCTPELKPSPPLYASNLLKPLNNNKVSHQNVDALSNHGKVSSFKNIEQSVAKSILK 619
T T T PSP + L++ V+ + G+ S +V K+ +
Sbjct: 535 TTQMTATELDAPSPAGTPVDEFPTLSHEPVARGRRGGAATRGQDPSRARFALAVKKAAQQ 594
Query: 620 PPA-LAPKGISYLFLGKSSFLEASNLGQGISSPKKSDSSKFANQTAQIASDSVQSRDETP 678
PA L P + F ++P+ + + +A S + R P
Sbjct: 595 SPANLPPPTLGAHF---------------AATPRPASTGPMLRTGPPVARASPRIRLRPP 639
Query: 679 RRIPVATKGVN----FLSFGNRSLE 699
+P + G +L++ R+++
Sbjct: 640 TLLPTLSTGAALNEMYLAYRARAIK 664
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFA-RNSCMKGDNCPFDHDL 526
+ C ++L G C D CKFSHD +A C F R +C K +NC F H L
Sbjct: 477 RVCRYFLAGECLRAD-CKFSHDI------ERAMCRFWLRGTCAKQENCEFLHHL 523
>gi|403331260|gb|EJY64569.1| hypothetical protein OXYTRI_15400 [Oxytricha trifallax]
Length = 2028
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHD------TVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
C HYL+G C+ GDKC H+ + +K C +F C GD C F H++
Sbjct: 559 CQHYLQGNCRFGDKCNNLHEGGTSQNSSANSKKKIPCRYFLEGMCKNGDKCTFSHEI 615
>gi|224116602|ref|XP_002317344.1| predicted protein [Populus trichocarpa]
gi|222860409|gb|EEE97956.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR--NSCMKGDNCPFDHDLSKYPCEN 533
C H+L+ C +GD C F H KS C F R C + D C + H N
Sbjct: 80 CRHWLRSLCMKGDACGFLHQ---YDKSRMPVCRFFRLYGECREQD-CVYKHTNEDIKECN 135
Query: 534 FVAKGFCNRGDNCLFSH-KLPPKEQDPPTP 562
GFC G +C + H KLP PP P
Sbjct: 136 MYKLGFCPNGPDCRYRHAKLP----GPPPP 161
>gi|384484468|gb|EIE76648.1| hypothetical protein RO3G_01352 [Rhizopus delemar RA 99-880]
Length = 553
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 500 TKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKE 556
TK + C HF C + D C F HDL + C+ F +G C +G +C FSH L KE
Sbjct: 214 TKKRQVCRHFLAGECYRKD-CWFVHDLQEKVCK-FWLQGSCLKGKSCEFSHNLDIKE 268
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 467 NLKP---KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
N++P K + C H+L G C D C F HD K C + + SC+KG +C F
Sbjct: 208 NVEPVDTKKRQVCRHFLAGECYRKD-CWFVHDL-----QEKVCKFWLQGSCLKGKSCEFS 261
Query: 524 HDL 526
H+L
Sbjct: 262 HNL 264
>gi|336272103|ref|XP_003350809.1| hypothetical protein SMAC_02479 [Sordaria macrospora k-hell]
gi|380094973|emb|CCC07475.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 357
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 65/160 (40%), Gaps = 39/160 (24%)
Query: 433 ALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGRC 484
A K K+A+K Q+ER+K+A ++ + L K+P + PKTV C + KG C
Sbjct: 51 AEQKRKEAEKAQREREKKAAEDAKREADLLLNKPAQIQKVPFGVDPKTV-VCIFFKKGNC 109
Query: 485 QEGDKCKFSHDTVPLTKSTKACCH---FARNSCMKGDNCPFDHDLSKYP----------- 530
++G KCKFSHD K K + A K D D K
Sbjct: 110 EKGKKCKFSHDLEMERKVEKRNLYQDTRAEEDDKKKQETSADWDEEKLRSVVLSKKGNQR 169
Query: 531 ------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C++ H LPP
Sbjct: 170 TTTDKVCKFFIEAIEEGKYGWFWVCPNGGDKCMYKHALPP 209
>gi|225444019|ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Vitis vinifera]
Length = 673
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR--NSCMKGDNCPFDHDLSKYPCEN 533
C H+L+ C +GD C F H KS C F R C + D C + H N
Sbjct: 65 CRHWLRSLCMKGDACGFLHQ---YDKSRMPVCRFFRLYGECREQD-CVYKHTNEDIKECN 120
Query: 534 FVAKGFCNRGDNCLFSH-KLPPKEQDPPT 561
GFC G +C + H KLP PPT
Sbjct: 121 MYKLGFCPNGSDCRYRHAKLP---GPPPT 146
>gi|403342615|gb|EJY70633.1| Nuclear protein export factor [Oxytricha trifallax]
Length = 1944
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHD------TVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
C HYL+G C+ GDKC H+ + +K C +F C GD C F H++
Sbjct: 475 CQHYLQGNCRFGDKCNNLHEGGTSQNSSANSKKKIPCRYFLEGMCKNGDKCTFSHEI 531
>gi|336370284|gb|EGN98624.1| hypothetical protein SERLA73DRAFT_181176 [Serpula lacrymans var.
lacrymans S7.3]
Length = 359
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 431 RSALSKEK----KAKKKQKERKKRAEKNRQLG-VRRLKLPQNLKPKTVKYCHHYLKGRCQ 485
+ AL+KEK +AK K E K++ E+ V++ K+P + PKTV C Y G C+
Sbjct: 49 KEALAKEKEKDLRAKAKLDEEKRKKEEAALFKPVQQQKVPFGVDPKTV-LCAFYKAGNCE 107
Query: 486 EGDKCKFSHDT-VPLTKSTKACCHFARNSCMKGDNCPFDHD------LSKYP-------- 530
+G KCKFSHD V K +R + +D + LSK+
Sbjct: 108 KGTKCKFSHDMNVGRKVEKKNLYEDSREDKLNDTMESWDEEKLRSVVLSKHGNPRTTTDI 167
Query: 531 -CENFVAK------GF---CNRGDNCLFSHKLPP 554
C+ F+ G+ C G+ C + H LPP
Sbjct: 168 VCKFFIEAIETQKFGWFWECPNGEKCQYRHALPP 201
>gi|296488183|tpg|DAA30296.1| TPA: makorin ring finger protein 1 [Bos taurus]
Length = 334
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 73 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 128
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 73 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCIYGDRCRYEH 120
>gi|410953065|ref|XP_003983196.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
makorin-1, partial [Felis catus]
Length = 462
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 41 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCIYGDRCRYEH 88
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 41 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 96
>gi|355702623|gb|AES01993.1| makorin ring finger protein 1 [Mustela putorius furo]
Length = 483
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 63 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 118
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD + + C +F R C+ GD C ++H
Sbjct: 63 CRYFMHGVCKEGDNCRYSHD-LSDSPYGVVCKYFQRGYCIYGDRCRYEH 110
>gi|348536391|ref|XP_003455680.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Oreochromis niloticus]
Length = 431
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EG+ C++SHD ++ C F + +C GD C F+H
Sbjct: 24 CRYFMHGLCKEGENCRYSHDLTSSKPASMICKFFQKGNCAFGDRCRFEH 72
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDL-SKYPCE---NFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C +F C +G+NC + HDL S P F KG C GD C F H P K ++ P
Sbjct: 24 CRYFMHGLCKEGENCRYSHDLTSSKPASMICKFFQKGNCAFGDRCRFEHSKPVKNEELPA 83
Query: 562 PST 564
T
Sbjct: 84 SQT 86
>gi|281349874|gb|EFB25458.1| hypothetical protein PANDA_013548 [Ailuropoda melanoleuca]
Length = 252
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|357442507|ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355480579|gb|AES61782.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 1035
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 506 CCHFARNSCMKGDNCPFDHDL-SKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPS 563
C +F R SC +G++C F H L +K P C+ F + C G +CLFSH + D P S
Sbjct: 752 CVYFMRGSCSRGNSCSFSHTLQAKRPQCKFFFSLQGCRNGGSCLFSHDV-----DRPAVS 806
Query: 564 ----TCTPE 568
C PE
Sbjct: 807 ARKNICRPE 815
>gi|340518147|gb|EGR48389.1| predicted protein [Trichoderma reesei QM6a]
Length = 433
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 505 ACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C H+ R C KG++C F H+ L K P C F+ G+C+ G+ CL+ H + P + PP
Sbjct: 243 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLH-VDPLSKLPPC 301
Query: 562 P 562
P
Sbjct: 302 P 302
>gi|308321941|gb|ADO28108.1| probable e3 ubiquitin-protein ligase makorin-2 [Ictalurus furcatus]
Length = 416
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG++C FSHD + +K + C + + C GD C +DH
Sbjct: 8 CRYFLHGVCREGNRCMFSHD-LATSKPSTICKFYQKGVCAYGDRCRYDH 55
>gi|427788143|gb|JAA59523.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Rhipicephalus pulchellus]
Length = 283
Score = 47.0 bits (110), Expect = 0.046, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG L P + C Y++G C + C F H T C H+ R C
Sbjct: 21 QQLGALPLPFP-GMDKSGAAVCCFYVQGNCSKASACPFRHVK---GDRTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D++K P F ++ C F H P K +D P
Sbjct: 77 KKGDQCEFLHEFDMTKMPECYFYSRFNACSNKECPFLHIDPEAKIKDCP 125
Score = 45.8 bits (107), Expect = 0.091, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C H+L+G C++GD+C+F H+ +TK + C ++R + CPF H + ++
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-FDMTKMPE-CYFYSRFNACSNKECPFLHIDPEAKIKDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 126 WYDRGFCRHGPICRHRH 142
>gi|47211970|emb|CAF95292.1| unnamed protein product [Tetraodon nigroviridis]
Length = 291
Score = 47.0 bits (110), Expect = 0.046, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P K + C +++ C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFPGMDKSGSA-VCEFFMRAACMKGAMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYPCENFVAK 537
KGD C F H D++K P F +K
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSK 101
Score = 42.7 bits (99), Expect = 0.81, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 499 LTKSTKACCHF-ARNSCMKGDNCPFDHDLSKYP--CENFVAKGFCNRGDNCLFSHK 551
+ KS A C F R +CMKG CPF H + C++++ +G C +GD C F H+
Sbjct: 33 MDKSGSAVCEFFMRAACMKGAMCPFRHISGEKTVVCKHWL-RGLCKKGDQCEFLHE 87
>gi|311275274|ref|XP_003134656.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 isoform 1 [Sus
scrofa]
Length = 482
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCIYGDRCRYEH 108
>gi|302142767|emb|CBI19970.3| unnamed protein product [Vitis vinifera]
Length = 994
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 47/112 (41%), Gaps = 32/112 (28%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP----- 530
C+ +LKG+C G CKFSH H A S + D DH+ + P
Sbjct: 406 CNDFLKGKCHRGSSCKFSH-------------HGA--SGDRYDRHDRDHERKREPHRVGG 450
Query: 531 --CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNL 580
C+ F A G C GD C FSH DPP S PE +P + NL
Sbjct: 451 ILCKYF-AMGKCFNGDRCRFSH------DDPPCDS---PEGRPRDGKWGHNL 492
>gi|85111349|ref|XP_963894.1| hypothetical protein NCU03048 [Neurospora crassa OR74A]
gi|28925641|gb|EAA34658.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 432
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLKGR-CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L+ C GD C SH+ + T C HF ++SC K D C F H
Sbjct: 268 PAKVAICKDFLQQEECINGDSCDLSHELS--AERTPTCLHFIKDSCTKPD-CKFTHAKVS 324
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C F G+C +G +C+ H
Sbjct: 325 PAASVCREFGLYGYCEKGASCINRH 349
>gi|354481777|ref|XP_003503077.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1-like [Cricetulus
griseus]
Length = 495
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 494 HDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFS 549
H PL + +F C +GDNC + HDLS P C+ F +G+C GD C +
Sbjct: 63 HTWPPLAVFWLSYRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYE 121
Query: 550 HKLPPKEQD 558
H P K+++
Sbjct: 122 HSKPLKQEE 130
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDH 524
+++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 77 YFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 122
>gi|336383042|gb|EGO24191.1| hypothetical protein SERLADRAFT_388994 [Serpula lacrymans var.
lacrymans S7.9]
Length = 316
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 431 RSALSKEK----KAKKKQKERKKRAEKNRQLG-VRRLKLPQNLKPKTVKYCHHYLKGRCQ 485
+ AL+KEK +AK K E K++ E+ V++ K+P + PKTV C Y G C+
Sbjct: 6 KEALAKEKEKDLRAKAKLDEEKRKKEEAALFKPVQQQKVPFGVDPKTV-LCAFYKAGNCE 64
Query: 486 EGDKCKFSHDT-VPLTKSTKACCHFARNSCMKGDNCPFDHD------LSKYP-------- 530
+G KCKFSHD V K +R + +D + LSK+
Sbjct: 65 KGTKCKFSHDMNVGRKVEKKNLYEDSREDKLNDTMESWDEEKLRSVVLSKHGNPRTTTDI 124
Query: 531 -CENFVAK------GF---CNRGDNCLFSHKLPP 554
C+ F+ G+ C G+ C + H LPP
Sbjct: 125 VCKFFIEAIETQKFGWFWECPNGEKCQYRHALPP 158
>gi|335305220|ref|XP_003360159.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 isoform 2 [Sus
scrofa]
Length = 329
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCIYGDRCRYEH 108
>gi|114052376|ref|NP_001040511.1| cleavage and polyadenylation specific factor 4 [Bombyx mori]
gi|95102612|gb|ABF51244.1| cleavage and polyadenylation specific factor 4 [Bombyx mori]
Length = 288
Score = 47.0 bits (110), Expect = 0.047, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C H+L+G C++GD+C+F H+ ++K + C +AR + CPF H SK
Sbjct: 69 CKHWLRGLCKKGDQCEFLHE-YDMSKMPE-CYFYARFNACHNKECPFLHIDPESKIKDCP 126
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G +C H
Sbjct: 127 WYDRGFCRHGPHCRHRH 143
Score = 43.1 bits (100), Expect = 0.68, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 456 QLGVRRLKLPQNLKPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
Q G L P + T C Y + G C G +C + H T C H+ R C
Sbjct: 22 QYGALPLPFP-GMDKSTAAVCEFYSQPGGCGNGAQCPYRHVR---GDRTVVCKHWLRGLC 77
Query: 515 MKGDNCPFDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
KGD C F H D+SK P F A+ C F H P K +D P
Sbjct: 78 KKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPESKIKDCP 126
>gi|148234971|ref|NP_001086242.1| probable E3 ubiquitin-protein ligase makorin-1 [Xenopus laevis]
gi|82200985|sp|Q6GLT5.1|MKRN1_XENLA RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|49256484|gb|AAH74368.1| MGC84269 protein [Xenopus laevis]
Length = 408
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD 525
C +++ G C+EG C++SHD + ++S C +F R C GD C ++H+
Sbjct: 40 CRYFIHGVCKEGINCRYSHD-LATSRSAMICRYFQRGCCAYGDRCRYEHN 88
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 506 CCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C +F C +G NC + HDL S C F +G C GD C + H P Q+ PT
Sbjct: 40 CRYFIHGVCKEGINCRYSHDLATSRSAMICRYF-QRGCCAYGDRCRYEHNKP--LQEDPT 96
Query: 562 PSTCT 566
TCT
Sbjct: 97 GDTCT 101
>gi|79356321|ref|NP_174334.2| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana]
gi|229553918|sp|A9LNK9.1|CPSF_ARATH RecName: Full=Cleavage and polyadenylation specificity factor
CPSF30; AltName: Full=Zinc finger CCCH domain-containing
protein 11; Short=AtC3H11
gi|160338218|gb|ABX26048.1| cleavage and polyadenylation specificity factor-YT521B [Arabidopsis
thaliana]
gi|332193100|gb|AEE31221.1| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana]
Length = 631
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR--NSCMKGDNCPFDHDLSKYPCEN 533
C H+L+G C +GD C F H K+ C F R C + D C + H N
Sbjct: 66 CRHWLRGLCMKGDACGFLHQ---FDKARMPICRFFRLYGECREQD-CVYKHTNEDIKECN 121
Query: 534 FVAKGFCNRGDNCLFSH 550
GFC G +C + H
Sbjct: 122 MYKLGFCPNGPDCRYRH 138
>gi|417401637|gb|JAA47695.1| Putative e3 ubiquitin-protein ligase makorin-1 isoform 5 [Desmodus
rotundus]
Length = 478
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 55 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGHCIYGDRCRYEH 102
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
C +F C +GDNC + HDLS P C+ F +G C GD C + H P K+++ T
Sbjct: 55 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGHCIYGDRCRYEHGKPLKQEEAAT 113
>gi|429847818|gb|ELA23374.1| ccch finger dna binding protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 355
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 9/72 (12%)
Query: 432 SALSKEKKAKKKQKERKKRA--EKNRQLGV------RRLKLPQNLKPKTVKYCHHYLKGR 483
SA K K+A+K Q+ER+K+A E R+L + + K+P + PKTV C + KG
Sbjct: 51 SADQKRKEAEKAQREREKKAAEEAKRELDLLMNKPAQIQKVPFGVDPKTV-VCIFFKKGN 109
Query: 484 CQEGDKCKFSHD 495
C++G KCKFSH+
Sbjct: 110 CEKGKKCKFSHN 121
>gi|348554818|ref|XP_003463222.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2-like
[Cavia porcellus]
Length = 531
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 462 LKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCP 521
+ +P + K V C +++ G C+EG +C FSHD V +K + C ++ + C G C
Sbjct: 109 VHIPATMSTKQVT-CRYFMHGVCREGSQCLFSHDLVN-SKPSTICKYYQKGCCAYGTRCR 166
Query: 522 FDH 524
+DH
Sbjct: 167 YDH 169
>gi|344297146|ref|XP_003420260.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Loxodonta
africana]
Length = 482
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCIYGDRCRYEH 108
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 116
>gi|291413292|ref|XP_002722910.1| PREDICTED: makorin ring finger protein 1 [Oryctolagus cuniculus]
Length = 433
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 465 PQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPF 522
PQ P + +Y +L G C+EGD C++SHD L+ S C +F R C+ GD C +
Sbjct: 6 PQFCGPLSRRY---FLHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCIYGDRCRY 59
Query: 523 DH 524
+H
Sbjct: 60 EH 61
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 508 HFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
+F C +GDNC + HDLS P C+ F +G+C GD C + H P + +D
Sbjct: 16 YFLHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLEPED 69
>gi|213402063|ref|XP_002171804.1| zinc finger protein Yth1 [Schizosaccharomyces japonicus yFS275]
gi|211999851|gb|EEB05511.1| zinc finger protein Yth1 [Schizosaccharomyces japonicus yFS275]
Length = 171
Score = 47.0 bits (110), Expect = 0.050, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 37/117 (31%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF--ARNSCMKGDNCPFDH--------- 524
C H+L+G C++G++C+F H+ CHF R C G+ C + H
Sbjct: 55 CKHWLRGLCKKGNQCEFLHE---YNLKKMPPCHFYAERGWCSNGEECLYLHLDPSKQVGV 111
Query: 525 ------------------DLSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
+ K P CE F+A GFC G NC H PK +P P
Sbjct: 112 CAWYNMGFCPLGPICRGKHVRKGPICERFLA-GFCQLGPNCPHPH---PKHIEPMHP 164
>gi|403263831|ref|XP_003924212.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1-like [Saimiri
boliviensis boliviensis]
Length = 468
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 50 CRYFMHGVCKEGDNCGYSHDLSDSPHGVVCKYF-HQGYCIYGDGCRYEHSKPLKQEE 105
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C +SHD L+ S C +F + C+ GD C ++H
Sbjct: 50 CRYFMHGVCKEGDNCGYSHD---LSDSPHGVVCKYFHQGYCIYGDGCRYEH 97
>gi|392565612|gb|EIW58789.1| hypothetical protein TRAVEDRAFT_47931 [Trametes versicolor
FP-101664 SS1]
Length = 428
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 470 PKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P + C +L+G C + C SHD P + T C HFA N NC + H
Sbjct: 209 PNKIAICWPFLQGNCPHTAETCALSHDPTP--QRTPLCVHFANNGRCTRANCLYPHVHVG 266
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
+ C +F G+C +G +C
Sbjct: 267 AREGICRDFAVLGYCEKGLDC 287
>gi|255073867|ref|XP_002500608.1| predicted protein [Micromonas sp. RCC299]
gi|226515871|gb|ACO61866.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 284
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 9/64 (14%)
Query: 440 AKKKQKERKKRAEKNRQ--------LGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCK 491
AKK++ +++K AE+ Q L +++ K+P+ + PKT+ C + KGRC +G KCK
Sbjct: 80 AKKRENDKRKAAEEQAQRELDEMMGLAIKQPKVPEGVDPKTIP-CEFFKKGRCAKGWKCK 138
Query: 492 FSHD 495
FSH+
Sbjct: 139 FSHE 142
>gi|149065309|gb|EDM15385.1| rCG28025, isoform CRA_a [Rattus norvegicus]
Length = 481
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
>gi|226291059|gb|EEH46487.1| CCCH zinc finger protein [Paracoccidioides brasiliensis Pb18]
Length = 516
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L+ G+C G C SHD P + + AC HF R C C + H +
Sbjct: 288 PHKVAICKEFLQTGKCPAGLACDLSHDPSP--ERSPACLHFLRGRC-SNPLCRYAHVRVN 344
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
C +F G+C +GD C
Sbjct: 345 PGAPVCRDFAILGYCIKGDTC 365
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 497 VPLTKSTKACCHF-ARNSCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPP 554
+P+ K + C F + SC KG NCP+ HD K C+ F+ G C G C SH P
Sbjct: 258 MPIKKKVELCKRFTSTGSCFKGPNCPYIHDPHKVAICKEFLQTGKCPAGLACDLSHD-PS 316
Query: 555 KEQDP 559
E+ P
Sbjct: 317 PERSP 321
>gi|432843806|ref|XP_004065674.1| PREDICTED: uncharacterized protein LOC101155004 [Oryzias latipes]
Length = 813
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF--ARNSCMKGDNCPF--DHDLSKYPC 531
C H+L+G+C + D C+ H KA C F A C K + + +PC
Sbjct: 176 CRHFLRGQCVKADTCQLEH-VQSCNDLIKAVCKFYVASYRCTKLQTVAYFLNSAAQSFPC 234
Query: 532 ENFVAKGFCNRGDNCLFSHK 551
+ F +G C + D+C FSH+
Sbjct: 235 KYFHQRGKCLQQDSCRFSHE 254
>gi|350295519|gb|EGZ76496.1| hypothetical protein NEUTE2DRAFT_54638 [Neurospora tetrasperma FGSC
2509]
Length = 432
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLKGR-CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L+ C GD C SHD + T C HF ++SC K D C F H
Sbjct: 268 PAKVAICKDFLQQEECINGDSCDLSHDLS--AERTPTCLHFIKDSCTKPD-CKFTHAKVS 324
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C F G+C +G +C H
Sbjct: 325 PAAPVCREFGLYGYCEKGASCTNRH 349
>gi|57157094|dbj|BAD83579.1| RFP [Mus musculus]
Length = 486
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
>gi|296814222|ref|XP_002847448.1| translation machinery-associated protein 46 [Arthroderma otae CBS
113480]
gi|238840473|gb|EEQ30135.1| translation machinery-associated protein 46 [Arthroderma otae CBS
113480]
Length = 345
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 430 KRSALSKEKKAKKKQK-ERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGD 488
KR A+ KE++ K+K E+ KR V+ K+P + PKTV C + KG C++G
Sbjct: 36 KRKAMEKERREKEKAAAEQAKREVAELFKPVQVQKVPFGVDPKTV-LCVFFKKGNCEKGR 94
Query: 489 KCKFSHDTVPLTKSTKACCHFARNSCMKGDNCP----FDHD------LSKYP-------- 530
KCKFSHD K+ K + N +D LSK+
Sbjct: 95 KCKFSHDLSVERKAEKKNIYQDTREEQDPKNADTMDNWDEQKLRDVVLSKHGNPRTTTDK 154
Query: 531 -CENFVAK------GF---C-NRGDNCLFSHKLPP 554
C+ F+ G+ C N GD C++ H LPP
Sbjct: 155 VCKYFIEAVENQKYGWFWTCPNGGDKCMYKHSLPP 189
>gi|336274258|ref|XP_003351883.1| hypothetical protein SMAC_00430 [Sordaria macrospora k-hell]
Length = 444
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L+ G C GD C SH+ + C HF ++SC K D C F H
Sbjct: 280 PAKVAVCKDFLQQGECVNGDSCDLSHELS--AERIPTCLHFIKDSCTKPD-CKFTHAKVS 336
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C F G+C +G +C H
Sbjct: 337 PAAPVCREFGLYGYCEKGASCTDRH 361
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 499 LTKSTKACCHFARNSCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKL 552
+ K+ + C SC KG C + HD +K C++F+ +G C GD+C SH+L
Sbjct: 259 IVKAQRVC------SCTKGPRCRYIHDPAKVAVCKDFLQQGECVNGDSCDLSHEL 307
>gi|443916611|gb|ELU37616.1| zf-CCCH domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 468
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 25/99 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSH---DTV----------------PLTK--STKACCHFARNSC 514
C ++ GRC +GD+C F H D V P + + C F + C
Sbjct: 288 CKYWAAGRCNQGDECPFKHTYGDDVEHGLDTQGQAQDSRENPYWRIHPARPCKWFQQGQC 347
Query: 515 MKGDNCPFDHDL---SKYPCENFVAKGFCNRGDNCLFSH 550
++GDNC + H L + C+ + G C G C F H
Sbjct: 348 LRGDNCNYLHTLETPTPVVCKFYPTPG-CRNGSECPFVH 385
>gi|443898042|dbj|GAC75380.1| C3H1-type Zn-finger protein [Pseudozyma antarctica T-34]
Length = 609
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 464 LPQNLKPKTVKYCHHYLKGR-CQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCP 521
L + + V +C HYL+ R C+ G C ++H + +TK C F+ C +G +C
Sbjct: 351 LSHTPRAERVPHCVHYLRSRHCRNGTACLYTHADLVDGLATKICRDFSEYGWCERGASCE 410
Query: 522 FDHDLSKYPCENFVAKGFCNRGDNCLFSHKL 552
H Y C +FV G C R C H L
Sbjct: 411 QRH---TYECPDFVENGSCQR-KGCKLLHIL 437
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 33/113 (29%)
Query: 471 KTVKYCHHYLK-GRCQEGDKCKFSHD---------------------TVPLTKSTKA--- 505
K+ C + K G+C+ G C + HD T PL+ + +A
Sbjct: 301 KSRTLCTFFNKTGQCKRGLSCPYRHDSSKIALCPKVLRAAGCTLPKGTCPLSHTPRAERV 360
Query: 506 --CCHFARNS-CMKGDNCPFDH-----DLSKYPCENFVAKGFCNRGDNCLFSH 550
C H+ R+ C G C + H L+ C +F G+C RG +C H
Sbjct: 361 PHCVHYLRSRHCRNGTACLYTHADLVDGLATKICRDFSEYGWCERGASCEQRH 413
>gi|148223932|ref|NP_001090106.1| makorin ring finger protein 2 [Xenopus laevis]
gi|76780346|gb|AAI06425.1| MGC131105 protein [Xenopus laevis]
Length = 409
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG +C FSHD +K + C F R C G C +DH
Sbjct: 8 CRYFLHGVCREGSRCLFSHDLA-TSKPSTVCRFFLRGQCAYGTRCRYDH 55
>gi|315040053|ref|XP_003169404.1| hypothetical protein MGYG_08308 [Arthroderma gypseum CBS 118893]
gi|311346094|gb|EFR05297.1| hypothetical protein MGYG_08308 [Arthroderma gypseum CBS 118893]
Length = 444
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G+C G C SHD P + + AC HF R C C + H +
Sbjct: 269 PNKVAICKDFLQTGKCDAGLACDLSHDPSP--ERSPACLHFLRGRCTN-PCCRYTH-VHI 324
Query: 529 YP----CENFVAKGFCNRGDNCLFSH 550
P C +F G+C++G C H
Sbjct: 325 TPGAPVCRDFAILGYCSKGATCEGRH 350
>gi|148229622|ref|NP_061280.2| E3 ubiquitin-protein ligase makorin-1 [Mus musculus]
gi|26345866|dbj|BAC36584.1| unnamed protein product [Mus musculus]
Length = 481
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
>gi|451853416|gb|EMD66710.1| hypothetical protein COCSADRAFT_301475 [Cochliobolus sativus
ND90Pr]
Length = 658
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
R +G + P N K + C Y +G CQ G C F H PLT+ C +F + +C
Sbjct: 96 RDMGFAGPRSPPNNKNTSHVPCKFYRQGACQAGKACPFLHSDEPLTERAP-CKYFTKGNC 154
Query: 515 MKGDNCPFDHDL 526
G C H L
Sbjct: 155 KFGQKCALAHIL 166
>gi|17369431|sp|Q9QXP6.1|MKRN1_MOUSE RecName: Full=E3 ubiquitin-protein ligase makorin-1
gi|6572966|gb|AAF17488.1|AF192785_1 makorin 1 [Mus musculus]
Length = 481
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
>gi|55793567|gb|AAV65767.1| makorin 1 [Mus caroli]
Length = 365
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
>gi|452004846|gb|EMD97302.1| hypothetical protein COCHEDRAFT_1209157 [Cochliobolus
heterostrophus C5]
Length = 658
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
R +G + P N K + C Y +G CQ G C F H PLT+ C +F + +C
Sbjct: 96 RDMGFAGPRSPPNNKNTSHVPCKFYRQGACQAGKACPFLHSDEPLTERAP-CKYFTKGNC 154
Query: 515 MKGDNCPFDHDL 526
G C H L
Sbjct: 155 KFGQKCALAHIL 166
>gi|222635942|gb|EEE66074.1| hypothetical protein OsJ_22091 [Oryza sativa Japonica Group]
Length = 1972
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C ++L+G C C + H V L + C F + C GD C
Sbjct: 1781 KLTHKVLPERMPDCSYFLRGLCT-NIACPYRHVKVNL--NAPVCEDFLKGYCAYGDEC-- 1835
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
H Y C F A G C +G C H
Sbjct: 1836 -HKKHSYVCPVFEATGECPQGSRCKLHH 1862
>gi|148681661|gb|EDL13608.1| makorin, ring finger protein, 1, isoform CRA_d [Mus musculus]
Length = 481
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
>gi|242804168|ref|XP_002484320.1| high-affinity glucose transporter, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717665|gb|EED17086.1| high-affinity glucose transporter, putative [Talaromyces stipitatus
ATCC 10500]
Length = 805
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+LKG C++G KC++ H+ + C F+R+ C G++C + H + ++ P C
Sbjct: 642 CKHFLKGLCKKGFKCEYLHEYN--LRRMPECASFSRSGYCPNGEDCLYHHVRENARLPRC 699
Query: 532 ENFVAKGFCNRGDNC 546
E++ +GFC G C
Sbjct: 700 EHY-DRGFCPLGPIC 713
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 18/96 (18%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDT--------------VP-LTKSTKACCHFARNSCMKG 517
V C + +G C G C H T P +T + C HF + C KG
Sbjct: 594 VPVCKAFKEGHCPLGPTCPDRHPTPSRVTTSSTNASGLAPSVTHGSLVCKHFLKGLCKKG 653
Query: 518 DNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSH 550
C + H+ L + P C +F G+C G++CL+ H
Sbjct: 654 FKCEYLHEYNLRRMPECASFSRSGYCPNGEDCLYHH 689
>gi|389746178|gb|EIM87358.1| hypothetical protein STEHIDRAFT_121003, partial [Stereum hirsutum
FP-91666 SS1]
Length = 149
Score = 46.6 bits (109), Expect = 0.059, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 29/105 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSHD-----TVPLTKSTK---------ACCHFARNSCMKGDNCP 521
C +L+G+C GDKCK H T +T +T+ C +F++ +CM G C
Sbjct: 7 CSFWLQGKCTFGDKCKNPHAVPAALTPTMTPATRWPKPQAELGICPYFSKGTCMFGGKCR 66
Query: 522 FDH-----------DLSKY--PCENFVAKGFCNRGDNCLFSHKLP 553
H L K PC+ F A+G C+R D C FSH P
Sbjct: 67 LAHISPPMQTPTTVPLPKPFGPCK-FFAQGNCSRVD-CPFSHYEP 109
>gi|47208487|emb|CAF93085.1| unnamed protein product [Tetraodon nigroviridis]
Length = 376
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG C+FSHD +K + C + R +C GD C +DH
Sbjct: 8 CRYFLHGVCREGPHCQFSHDPSS-SKPSTICKFYQRGTCAYGDRCRYDH 55
>gi|307183125|gb|EFN70042.1| Cleavage and polyadenylation specificity factor subunit 4
[Camponotus floridanus]
Length = 287
Score = 46.6 bits (109), Expect = 0.060, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C Y +G C +G C F H T C H+ R C KGD C F H D++K P
Sbjct: 41 CQFYPRGTCSKGASCPFRHVR---GDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 97
Query: 534 FVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
F ++ C F H P K +D P
Sbjct: 98 FYSRFNACHNKECPFLHIDPETKVRDCP 125
Score = 45.8 bits (107), Expect = 0.097, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C H+L+G C++GD+C+F H+ +TK + C ++R + CPF H + +
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSRFNACHNKECPFLHIDPETKVRDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 126 WYDRGFCRHGPLCRHRH 142
>gi|15227112|ref|NP_182290.1| zinc finger CCCH domain-containing protein 31 [Arabidopsis
thaliana]
gi|75317978|sp|O22243.2|C3H31_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 31;
Short=AtC3H31
gi|3738282|gb|AAC63624.1| putative ATP-dependent RNA helicase A [Arabidopsis thaliana]
gi|225898609|dbj|BAH30435.1| hypothetical protein [Arabidopsis thaliana]
gi|330255781|gb|AEC10875.1| zinc finger CCCH domain-containing protein 31 [Arabidopsis
thaliana]
Length = 1015
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 505 ACCHFARNSCMKGDNCPFDHDL--SKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
C +F C +G C F H L ++ C+ F + C G++CLFSH + + P
Sbjct: 732 VCVYFLNGYCNRGGQCTFTHTLQSTRPACKFFASSQGCRNGESCLFSHAMRRRTTSYLPP 791
Query: 563 STCTPE 568
C PE
Sbjct: 792 PQCLPE 797
>gi|323350234|gb|EGA84381.1| Yth1p [Saccharomyces cerevisiae VL3]
Length = 193
Score = 46.6 bits (109), Expect = 0.061, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D+C++ H+ + C F++N C + +C + H SK P C
Sbjct: 67 CRHWLRGLCKKNDQCEYLHEYN--LRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKC 124
Query: 532 ENFVAKGFCNRGDNCLFSH 550
EN+ GFC G +C H
Sbjct: 125 ENY-EMGFCPLGSSCPRRH 142
Score = 41.6 bits (96), Expect = 1.8, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G C H +P+ ++ C H+ R C K D C + H+ L K P C F G+C
Sbjct: 46 CPRGPLCPKKH-VLPIFQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYC 104
Query: 541 NRGDNCLFSHKLP 553
+ +C + H P
Sbjct: 105 TQSPDCQYLHIDP 117
>gi|358365324|dbj|GAA81946.1| CCCH zinc finger and SMR domain protein [Aspergillus kawachii IFO
4308]
Length = 740
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
C ++L G+C D C+FSHD + C ++ +C+ GD CPF HD S
Sbjct: 285 CKYWLSTGQCLRAD-CRFSHDL-----TNHLCKYWVMGNCLAGDGCPFSHDPSALVANLS 338
Query: 535 VAKGFCNRGDNCLFSHKLPPKEQDPPTPSTC 565
V G G H + PP ST
Sbjct: 339 VTDGTPGTGSPGTSFHMESTSDAFPPLQSTA 369
>gi|328767862|gb|EGF77910.1| hypothetical protein BATDEDRAFT_35890 [Batrachochytrium
dendrobatidis JAM81]
Length = 348
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 9/63 (14%)
Query: 441 KKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGRCQEGDKCKF 492
+KK+++ KK+AE+ R+ + L K+P + PKTV C ++ G+CQ+G +CKF
Sbjct: 56 RKKEQDDKKKAEEQRKAELAELFKPIITQQKVPFGVDPKTV-LCAYFKAGQCQKGTRCKF 114
Query: 493 SHD 495
SHD
Sbjct: 115 SHD 117
>gi|388858009|emb|CCF48454.1| uncharacterized protein [Ustilago hordei]
Length = 1795
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKST--KACCH-FARNSCMKGDNCPFDHD 525
C + +G C+ GD CK+SH T P + K CH FAR +C G+ C F HD
Sbjct: 8 CPFFQRGICRFGDACKYSHTTSPHDSGSVQKLPCHAFARGACRYGNWCKFSHD 60
Score = 39.7 bits (91), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Query: 499 LTKSTKACCHFARNSCMKGDNCPFDHDLS--------KYPCENFVAKGFCNRGDNCLFSH 550
+ K + C F R C GD C + H S K PC F A+G C G+ C FSH
Sbjct: 1 MDKLKQPCPFFQRGICRFGDACKYSHTTSPHDSGSVQKLPCHAF-ARGACRYGNWCKFSH 59
>gi|55793575|gb|AAV65768.1| makorin 1 [Mus spretus]
Length = 365
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
>gi|330799449|ref|XP_003287757.1| hypothetical protein DICPUDRAFT_87737 [Dictyostelium purpureum]
gi|325082212|gb|EGC35701.1| hypothetical protein DICPUDRAFT_87737 [Dictyostelium purpureum]
Length = 481
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSH-DTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
C + L+G CQ+G+KC++ H + +P KA C F +C + NCP+ H C+++
Sbjct: 76 CIYDLQGICQKGEKCEYQHSNNLPF----KANCKFTLKAC-RLVNCPYRHSPETIICKHW 130
Query: 535 VAKGFCNRGDNCLFSHKLPP 554
+ G C + C F+H L P
Sbjct: 131 LY-GNC-KNSQCPFTHDLTP 148
>gi|213407162|ref|XP_002174352.1| zinc finger protein LEE1 [Schizosaccharomyces japonicus yFS275]
gi|212002399|gb|EEB08059.1| zinc finger protein LEE1 [Schizosaccharomyces japonicus yFS275]
Length = 518
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHDL--SKYPCENFVAKGFCNRGDNCLFSH 550
C F + +C G+NCPF H L + PC+ F+ KG C G C SH
Sbjct: 57 CKFFRQGACTAGNNCPFSHSLDNERSPCKYFL-KGNCKFGSKCALSH 102
>gi|171689480|ref|XP_001909680.1| hypothetical protein [Podospora anserina S mat+]
gi|170944702|emb|CAP70813.1| unnamed protein product [Podospora anserina S mat+]
Length = 354
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 38/160 (23%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGR 483
SA K+K+A+K +ER+K+A ++ + L K+P + PKTV C + KG
Sbjct: 51 SAEQKKKEAEKAAREREKKAAEDAKREAELLLNKPAQIQKVPFGVDPKTV-LCIFFKKGN 109
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCH--FARNSCMKGDNCPFDHD--------LSK----- 528
C++G KCKFSHD K K + + K D D LSK
Sbjct: 110 CEKGKKCKFSHDLEVERKVEKKNLYTDTREDEDKKKQETSADWDEEKLRSVVLSKKGNQR 169
Query: 529 ----YPCENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F++ C N GD C++ H LPP
Sbjct: 170 TTTDKVCKFFISAIEDGKYGWFWVCPNGGDKCMYKHALPP 209
>gi|149065312|gb|EDM15388.1| rCG28025, isoform CRA_d [Rattus norvegicus]
Length = 196
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
>gi|51948434|ref|NP_001004233.1| E3 ubiquitin-protein ligase makorin-1 [Rattus norvegicus]
gi|51260828|gb|AAH79407.1| Makorin ring finger protein 1 [Rattus norvegicus]
gi|149065311|gb|EDM15387.1| rCG28025, isoform CRA_c [Rattus norvegicus]
Length = 329
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
>gi|302832461|ref|XP_002947795.1| hypothetical protein VOLCADRAFT_103576 [Volvox carteri f.
nagariensis]
gi|300267143|gb|EFJ51328.1| hypothetical protein VOLCADRAFT_103576 [Volvox carteri f.
nagariensis]
Length = 652
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
KTV C ++L+G C +GD C F H V + C + + +CP+ H L +
Sbjct: 154 KTV--CTYWLRGLCMKGDACGFLHQFV--SDRMPVCRNLLKYGECHDQDCPYKHSLDEIK 209
Query: 531 CENFVAKGFCNRGDNCLFSH-KLPPKEQDP 559
N GFC G C + H K P DP
Sbjct: 210 ECNMYKLGFCIYGPVCRYKHIKNPGPPPDP 239
>gi|365982091|ref|XP_003667879.1| hypothetical protein NDAI_0A04800 [Naumovozyma dairenensis CBS 421]
gi|343766645|emb|CCD22636.1| hypothetical protein NDAI_0A04800 [Naumovozyma dairenensis CBS 421]
Length = 215
Score = 46.6 bits (109), Expect = 0.066, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D+C++ H+ + C +++N C + C + H +SK P C
Sbjct: 67 CKHWLRGLCKKNDQCEYLHEYN--LRKMPECVFYSKNGYCTQTPECQYLHIDPMSKIPRC 124
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ GFC+ GD C H
Sbjct: 125 EDYDV-GFCSLGDGCPRRH 142
>gi|51535575|dbj|BAD37519.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 2068
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C ++L+G C C + H V L + C F + C GD C
Sbjct: 1877 KLTHKVLPERMPDCSYFLRGLCT-NIACPYRHVKVNL--NAPVCEDFLKGYCAYGDEC-- 1931
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
H Y C F A G C +G C H
Sbjct: 1932 -HKKHSYVCPVFEATGECPQGSRCKLHH 1958
>gi|398397036|ref|XP_003851976.1| hypothetical protein MYCGRDRAFT_72759, partial [Zymoseptoria
tritici IPO323]
gi|339471856|gb|EGP86952.1| hypothetical protein MYCGRDRAFT_72759 [Zymoseptoria tritici IPO323]
Length = 171
Score = 46.6 bits (109), Expect = 0.068, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 19/110 (17%)
Query: 465 PQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
P+N + V C +L+G+CQ G C FSHD T+ T C +FA+ C G C H
Sbjct: 42 PKNKNTQHVP-CKFFLQGQCQAGSMCPFSHDVESTTRPT-PCKYFAKGGCKFGRKCALLH 99
Query: 525 DLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPP 574
P V + + P+ Q P P T +P PP
Sbjct: 100 ---ITPEGQIVNRPY--------------PQHQQPYMPQAQTSFAQPPPP 132
>gi|169607695|ref|XP_001797267.1| hypothetical protein SNOG_06906 [Phaeosphaeria nodorum SN15]
gi|111064437|gb|EAT85557.1| hypothetical protein SNOG_06906 [Phaeosphaeria nodorum SN15]
Length = 336
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 40/158 (25%)
Query: 436 KEKKAKKKQKERKKRAEKNRQLGVRRL-------KLPQNLKPKTVKYCHHYLKGRCQEGD 488
K K+A+K QKE++K A + + V L K+P + PKT+ C + KG C++G
Sbjct: 51 KRKEAEKLQKEKEKLAAEAARKEVADLFKPVQIQKVPFGVDPKTI-LCQFFKKGNCEKGK 109
Query: 489 KCKFSHDTVPLTKSTKACCH-------FARNSCMKGDNCPFDHD------LSKY------ 529
KCKFSHD K+ K + + K N +D + LSK+
Sbjct: 110 KCKFSHDLNVERKTEKRSLYTDNRDKEEEEEAKKKETNTEWDEEKLRSVVLSKHGNPKTT 169
Query: 530 ---PCENFVAK------GF---C-NRGDNCLFSHKLPP 554
C+ F+ G+ C N GD+C + H LPP
Sbjct: 170 TDKVCKYFIQAIEDQKYGWFWTCPNGGDDCKYKHSLPP 207
>gi|380474248|emb|CCF45881.1| smr domain-containing protein [Colletotrichum higginsianum]
Length = 732
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 496 TVPLTKSTKACCHFARNS--CMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH--- 550
T P + + C F ++ C++ D C F HDLS + C+ +V G C GD C+FSH
Sbjct: 281 TTPAGQRSGVICKFYMSTGQCLRAD-CRFSHDLSNHLCKYWVM-GNCLAGDTCIFSHDPA 338
Query: 551 ----KL-------PPKEQDPPTPSTCTPELKPSPP 574
KL PP +Q T + P L P P
Sbjct: 339 HLMNKLALDGASTPPTKQANLTDFSLFPALPPGTP 373
>gi|121719912|ref|XP_001276654.1| CCCH zinc finger protein [Aspergillus clavatus NRRL 1]
gi|119404866|gb|EAW15228.1| CCCH zinc finger protein [Aspergillus clavatus NRRL 1]
Length = 452
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G C G C SH++ P + AC HF RN C D C + H +
Sbjct: 278 PNKVAICKDFLQTGTCSAGLDCDLSHESSP--HRSPACVHFLRNRCSNPD-CRYSH-VRV 333
Query: 529 YP----CENFVAKGFCNRGDNCLFSH 550
P C F G+C +G C H
Sbjct: 334 TPGAPVCRAFATLGYCEKGAECEERH 359
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 513 SCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPP 554
+C+KG CP+ HD +K C++F+ G C+ G +C SH+ P
Sbjct: 265 TCVKGPYCPYIHDPNKVAICKDFLQTGTCSAGLDCDLSHESSP 307
>gi|53749704|ref|NP_001005447.1| probable E3 ubiquitin-protein ligase makorin-2 [Xenopus (Silurana)
tropicalis]
gi|82236388|sp|Q6GLD9.1|MKRN2_XENTR RecName: Full=Probable E3 ubiquitin-protein ligase makorin-2
gi|49257931|gb|AAH74559.1| makorin, ring finger protein, 2 [Xenopus (Silurana) tropicalis]
Length = 418
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 25/170 (14%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C ++L G C+EG +C FSHD +K + C + R C G C +DH PC V
Sbjct: 8 CRYFLHGVCREGGRCLFSHDLA-TSKPSTVCRFYQRGQCAYGARCRYDH---VKPCNGSV 63
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPLNNNKVSHQNVD 595
PP+E P P TP L P+ P+ + +
Sbjct: 64 F---------------YPPQEMA-PAPLESTPPLLPT-----QEAAAPVTKSAPQRREKK 102
Query: 596 ALSNHGKVSSFKNIEQSVAKSILKPPALAPKGISYLFLGKSSFLEASNLG 645
++ + ++E++ L+P A +S L S+LEA G
Sbjct: 103 SVVLRDRDLCGASVEKAHPDPALRPGCAADPPVSELEAKPHSYLEAICTG 152
>gi|358396007|gb|EHK45394.1| hypothetical protein TRIATDRAFT_300036 [Trichoderma atroviride IMI
206040]
Length = 385
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 39/161 (24%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGR 483
SA ++K A+K Q+E++K+A ++ + L K+P + PKTV C Y KG
Sbjct: 52 SAEERKKAAEKAQREKEKKAAEDAKRETEALLNKPAQIQKVPFGVDPKTV-VCIFYKKGD 110
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHF---ARNSCMKGDNCPFDHD--------LSKYP-- 530
C++G KCKF+HD K+ K + K D D LSK
Sbjct: 111 CEKGKKCKFAHDLSIERKTEKKNLYTDVRQEEDDKKKVETSADWDEEQLRKVVLSKKGNQ 170
Query: 531 -------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C++ H LPP
Sbjct: 171 KTSTDKVCKFFIQAIEDGKYGWFWICPNGGDKCMYKHALPP 211
>gi|393238428|gb|EJD45965.1| hypothetical protein AURDEDRAFT_113875 [Auricularia delicata
TFB-10046 SS5]
Length = 355
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 398 STVQKEVVKQRVTQEQGITTKDKLDSGACNKRKRSALSKEKKAKKKQKERKKRAEKNRQL 457
+ VQK V Q V Q+ + K+K D +R+R A +K K+K++E AE + +
Sbjct: 30 AKVQKHV--QLVQQQAAMAGKNKEDLAKQRERERLAQAKLDAEKRKKEE----AEFFKPV 83
Query: 458 GVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHD 495
V+ K+P + PKTV C + G C +G+KCKFSH+
Sbjct: 84 QVQ--KVPFGVDPKTV-LCAFFKSGHCDKGNKCKFSHN 118
>gi|255724604|ref|XP_002547231.1| protein YTH1 [Candida tropicalis MYA-3404]
gi|240135122|gb|EER34676.1| protein YTH1 [Candida tropicalis MYA-3404]
Length = 207
Score = 46.2 bits (108), Expect = 0.071, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++GD C+F H+ + C +++N C + C + H SK P C
Sbjct: 71 CKHWLRGLCKKGDHCEFLHEYN--LRKMPECLFYSKNGYCTQTSECLYLHVDPQSKIPEC 128
Query: 532 ENFVAKGFCNRGDNCLFSH 550
N+ +GFC+ G NC H
Sbjct: 129 VNY-NQGFCSDGPNCKNRH 146
Score = 44.3 bits (103), Expect = 0.27, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACC-HFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGF 539
C +G+ C H V S K C H+ R C KGD+C F H+ L K P C + G+
Sbjct: 50 CPQGNNCPNKH--VSAMYSNKIVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGY 107
Query: 540 CNRGDNCLFSHKLPPKEQDP 559
C + CL+ H + P+ + P
Sbjct: 108 CTQTSECLYLH-VDPQSKIP 126
>gi|134081839|emb|CAK42094.1| unnamed protein product [Aspergillus niger]
Length = 343
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 36/157 (22%)
Query: 431 RSALSKEKKAKKKQKE-RKKRAEKNRQLG------VRRLKLPQNLKPKTVKYCHHYLKGR 483
++A +K+K+A+K ++E KK AE+ ++ V+ K+P + PKTV C Y +G
Sbjct: 47 KNADAKKKEAEKARREAEKKAAEQAKKEALELFKPVQVQKVPFGVDPKTV-LCVFYKQGN 105
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC-PFDHD------LSKYP------ 530
C++G KCKFSHD K+ K + +S K D +D + LSK+
Sbjct: 106 CEKGRKCKFSHDASVERKAAKKDLY--TDSRDKKDTIDDWDEEKLRKVILSKHGNPRTTT 163
Query: 531 ---CENFVAK------GF---C-NRGDNCLFSHKLPP 554
C+ F+ G+ C N GD C++ H LPP
Sbjct: 164 DKVCKYFIEAVENQKYGWFWTCPNGGDKCMYKHSLPP 200
>gi|190408034|gb|EDV11299.1| protein YTH1 [Saccharomyces cerevisiae RM11-1a]
gi|207340294|gb|EDZ68688.1| YPR107Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323331343|gb|EGA72761.1| Yth1p [Saccharomyces cerevisiae AWRI796]
Length = 208
Score = 46.2 bits (108), Expect = 0.072, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D+C++ H+ + C F++N C + +C + H SK P C
Sbjct: 67 CRHWLRGLCKKNDQCEYLHEYN--LRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKC 124
Query: 532 ENFVAKGFCNRGDNCLFSH 550
EN+ GFC G +C H
Sbjct: 125 ENY-EMGFCPLGSSCPRRH 142
Score = 41.6 bits (96), Expect = 2.1, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G C H +P+ ++ C H+ R C K D C + H+ L K P C F G+C
Sbjct: 46 CPRGPLCPKKH-VLPIFQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYC 104
Query: 541 NRGDNCLFSHKLP 553
+ +C + H P
Sbjct: 105 TQSPDCQYLHIDP 117
>gi|358339740|dbj|GAA47741.1| ccr4-not transcription complex [Clonorchis sinensis]
Length = 990
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 499 LTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPK 555
+ K +AC + R C K D C F HDL+K C+ F G C +G C F H PP+
Sbjct: 929 IAKWRRACSFYLRGHCKKED-CEFAHDLTKVTCK-FWEMGECFKGPTCPFLHGYPPE 983
>gi|323335176|gb|EGA76466.1| Yth1p [Saccharomyces cerevisiae Vin13]
gi|323346323|gb|EGA80613.1| Yth1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 208
Score = 46.2 bits (108), Expect = 0.072, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D+C++ H+ + C F++N C + +C + H SK P C
Sbjct: 67 CRHWLRGLCKKNDQCEYLHEYN--LRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKC 124
Query: 532 ENFVAKGFCNRGDNCLFSH 550
EN+ GFC G +C H
Sbjct: 125 ENY-EMGFCPLGSSCPRRH 142
Score = 41.6 bits (96), Expect = 2.1, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G C H +P+ ++ C H+ R C K D C + H+ L K P C F G+C
Sbjct: 46 CPRGPLCPKKH-VLPIFQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYC 104
Query: 541 NRGDNCLFSHKLP 553
+ +C + H P
Sbjct: 105 TQSPDCQYLHIDP 117
>gi|310794534|gb|EFQ29995.1| hypothetical protein GLRG_05139 [Glomerella graminicola M1.001]
Length = 355
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGR 483
SA K K+A+K Q+ER+K+A ++ + L K+P + PKTV C + KG
Sbjct: 50 SAEQKRKEAEKAQREREKKAAEDAKRETEMLLNKPAQIQKVPFGVDPKTV-VCIFFKKGN 108
Query: 484 CQEGDKCKFSHD 495
C++G KCKFSH+
Sbjct: 109 CEKGKKCKFSHN 120
>gi|449266324|gb|EMC77388.1| putative E3 ubiquitin-protein ligase makorin-2, partial [Columba
livia]
Length = 406
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+Y++G C+EG+KC FSHD + +KS+ C ++ + C G C +DH
Sbjct: 2 YYMQGVCREGNKCLFSHD-LATSKSSTICKYYQKGQCAYGTRCRYDH 47
>gi|291411295|ref|XP_002721911.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Oryctolagus cuniculus]
Length = 269
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|13097105|gb|AAH03329.1| Mkrn1 protein [Mus musculus]
gi|148681659|gb|EDL13606.1| makorin, ring finger protein, 1, isoform CRA_b [Mus musculus]
Length = 329
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK--ACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
>gi|301106366|ref|XP_002902266.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098886|gb|EEY56938.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 602
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDT----VPLTKSTKACCHFARNSCMKGDNCP 521
++ K TV C H+L+ C +GD C+F H +P + C + CP
Sbjct: 56 KDFKRGTV-VCRHWLRALCMKGDNCEFLHQYDMSKMPECRWGMEC---------QVPECP 105
Query: 522 FDH--DLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPT 561
F H D + C F +GFC+ G +C + H +E+ P T
Sbjct: 106 FRHVPDEERVEC-AFYKQGFCSHGSSCRYRHIKLAREECPET 146
>gi|73957940|ref|XP_850149.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Canis lupus familiaris]
Length = 269
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|74145512|dbj|BAE36185.1| unnamed protein product [Mus musculus]
gi|148702472|gb|EDL34419.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_a [Mus
musculus]
Length = 160
Score = 46.2 bits (108), Expect = 0.074, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 466 QNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH- 524
Q + + C+ + KG C +G C H+ + C H+ R C K D C F H
Sbjct: 31 QGMDKSSSAVCNFFAKGLCVKGMLCPLRHEQ---GEKLVVCKHWLRGLCRKSDCCDFLHQ 87
Query: 525 -DLSKYPCENFVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
D+SK P F +K G C+ + CLF H P K QD P
Sbjct: 88 YDVSKMPVCYFHSKFGNCSNKE-CLFLHLKPVLKLQDCP 125
>gi|294912261|ref|XP_002778171.1| hypothetical protein Pmar_PMAR018611 [Perkinsus marinus ATCC 50983]
gi|239886292|gb|EER09966.1| hypothetical protein Pmar_PMAR018611 [Perkinsus marinus ATCC 50983]
Length = 194
Score = 46.2 bits (108), Expect = 0.074, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 13/86 (15%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C +YL G C EG+ C F+H L C + CPF HD S+ +
Sbjct: 2 CIYYLAGGCTEGENCTFAHSPEELANPKTVMC--PSGAKCTDSTCPFAHDKSELVVGHQR 59
Query: 534 -------FVAKGF--CNRGDNCLFSH 550
++ GF CN GD C F+H
Sbjct: 60 VIQQMCKYIGPGFRGCNAGDCCRFAH 85
>gi|410079256|ref|XP_003957209.1| hypothetical protein KAFR_0D04260 [Kazachstania africana CBS 2517]
gi|372463794|emb|CCF58074.1| hypothetical protein KAFR_0D04260 [Kazachstania africana CBS 2517]
Length = 215
Score = 46.2 bits (108), Expect = 0.075, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 467 NLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH- 524
N + K V C H+L+G C++ D+C+F H+ + C +A+N C + C + H
Sbjct: 60 NFQNKIV--CKHWLRGLCKKNDQCEFLHEYN--LRKMPECVFYAKNGYCTQTPECQYLHV 115
Query: 525 -DLSKYP-CENFVAKGFCNRGDNCLFSH 550
+SK P CE + +GFC G NC H
Sbjct: 116 DPISKIPRCEAY-DQGFCFDGPNCKKRH 142
>gi|332867114|ref|XP_519234.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 7 [Pan troglodytes]
gi|397489494|ref|XP_003815761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Pan paniscus]
gi|410214168|gb|JAA04303.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249442|gb|JAA12688.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289414|gb|JAA23307.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353009|gb|JAA43108.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 269
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|189191914|ref|XP_001932296.1| hypothetical protein PTRG_01963 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973902|gb|EDU41401.1| hypothetical protein PTRG_01963 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 651
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
R +G + P N K + C Y +G CQ G C F H PLT+ C +F + +C
Sbjct: 90 RDMGFAGPRSPPNNKNTSHVPCKFYRQGACQAGKACPFLHSDEPLTERAP-CKYFTKGNC 148
Query: 515 MKGDNCPFDHDL 526
G C H L
Sbjct: 149 KFGQKCALAHIL 160
>gi|50288011|ref|XP_446434.1| hypothetical protein [Candida glabrata CBS 138]
gi|74610179|sp|Q6FTL0.1|YTH1_CANGA RecName: Full=mRNA 3'-end-processing protein YTH1
gi|49525742|emb|CAG59361.1| unnamed protein product [Candida glabrata]
Length = 209
Score = 46.2 bits (108), Expect = 0.075, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKY-PC 531
C H+L+G C++ D C++ H+ + C +A+N C + C + H LSK PC
Sbjct: 68 CKHWLRGLCKKNDNCEYLHEYN--LRKMPECVFYAKNGFCTQSPECQYLHIDPLSKVPPC 125
Query: 532 ENFVAKGFCNRGDNCLFSH 550
E++ GFC +G C H
Sbjct: 126 EDY-EMGFCPKGSACEKRH 143
>gi|395852822|ref|XP_003798929.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Otolemur garnettii]
Length = 269
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|340375004|ref|XP_003386027.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
[Amphimedon queenslandica]
Length = 430
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 69/167 (41%), Gaps = 32/167 (19%)
Query: 417 TKDKLDSGACNKRKRSALSKEKKAKK-KQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKY 475
++++ G + +K A+ E K KK E KK + + + KL + PK+V
Sbjct: 44 VQNQVKYGQQSSQKLEAMQFEAKKKKLSDLESKKEMDSLFKPVAKAQKLSADADPKSV-L 102
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGDNC-PFD---------- 523
C Y +G C +GDKCKFSHD KS K + AR+ ++ D +D
Sbjct: 103 CVFYKQGMCTKGDKCKFSHDLSLEGKSEKRSMYVDARD--LENDTIDTWDEEKLKEVVDK 160
Query: 524 -HDLSKYPCENFVAKGFC---------------NRGDNCLFSHKLPP 554
H P V K F N GD C++ H LPP
Sbjct: 161 KHGAKVMPKTEIVCKFFLQAIEDGKYGWFWECPNGGDKCIYRHCLPP 207
>gi|322704113|gb|EFY95712.1| CCCH zinc finger DNA binding protein [Metarhizium anisopliae ARSEF
23]
Length = 491
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 474 KYCH-HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLSKYPC 531
K C+ H+L+G C +GD C F HD P ++ A AR N C G +C D + + C
Sbjct: 395 KLCNNHFLRGPCTKGDSCFFVHDYKPSSEEINAIAVLARQNPCTNGQDCESDECIYGHHC 454
Query: 532 ENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELK 570
+ R + C+ P+E PP P +K
Sbjct: 455 PSI-------RDNVCIHPFCKFPEEAHPPGTKFKNPSIK 486
>gi|26347663|dbj|BAC37480.1| unnamed protein product [Mus musculus]
Length = 196
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 61 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 108
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 116
>gi|432115228|gb|ELK36738.1| Cleavage and polyadenylation specificity factor subunit 4 [Myotis
davidii]
Length = 269
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|17369657|sp|Q9TT91.1|MKRN1_MACEU RecName: Full=E3 ubiquitin-protein ligase makorin-1
gi|6572968|gb|AAF17489.1|AF192786_1 makorin 1 [Macropus eugenii]
Length = 478
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C++G+ C++SHD + ++S C ++ R C GD C ++H
Sbjct: 57 CRYFMHGVCKKGNNCRYSHD-LSTSQSAMVCRYYQRGCCAYGDRCRYEH 104
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C KG+NC + HDL S C + +G C GD C + H P K ++
Sbjct: 57 CRYFMHGVCKKGNNCRYSHDLSTSQSAMVC-RYYQRGCCAYGDRCRYEHTKPLKREE 112
>gi|311250935|ref|XP_003124350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Sus scrofa]
Length = 269
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|5729939|ref|NP_006684.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Homo sapiens]
gi|402862924|ref|XP_003895788.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Papio anubis]
gi|426357076|ref|XP_004045874.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Gorilla gorilla gorilla]
gi|37999487|sp|O95639.1|CPSF4_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=NS1 effector domain-binding
protein 1; Short=Neb-1; AltName: Full=No arches homolog
gi|4098572|gb|AAD00321.1| no arches [Homo sapiens]
gi|49457318|emb|CAG46958.1| CPSF4 [Homo sapiens]
gi|51094626|gb|EAL23878.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597073|gb|EAW76667.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|119597074|gb|EAW76668.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|124302214|gb|ABN05292.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|261861580|dbj|BAI47312.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
gi|355560471|gb|EHH17157.1| hypothetical protein EGK_13489 [Macaca mulatta]
gi|355747522|gb|EHH52019.1| hypothetical protein EGM_12382 [Macaca fascicularis]
gi|380809012|gb|AFE76381.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|383413433|gb|AFH29930.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|384940110|gb|AFI33660.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
Length = 269
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|348511281|ref|XP_003443173.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Oreochromis niloticus]
Length = 265
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +++ CQ+G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGSAVCEFFMRAACQKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 33/140 (23%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDT---------------------VPLTK-----STK 504
KTV C H+L+G C++GD+C+F H+ P K
Sbjct: 64 KTV-VCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIK 122
Query: 505 ACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQDPP 560
C + R C G +C H + C N++ GFC G +C F H +LP + PP
Sbjct: 123 DCPWYDRGFCKHGPDCRHRHT-RRVICVNYLV-GFCPEGKSCKFMHPRFELPMGASEQPP 180
Query: 561 TPSTCTPELKPSPPLYASNL 580
P + KP P + S+L
Sbjct: 181 LPQQNQNQAKPVPTIGRSSL 200
>gi|380490598|emb|CCF35901.1| hypothetical protein CH063_01393 [Colletotrichum higginsianum]
Length = 355
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGR 483
SA K K+A+K Q+ER+K+A ++ + L K+P + PKTV C + KG
Sbjct: 51 SAEQKRKEAEKAQREREKKAAEDAKRETELLLNKPAQIQKVPFGVDPKTV-VCIFFKKGN 109
Query: 484 CQEGDKCKFSHD 495
C++G KCKFSH+
Sbjct: 110 CEKGKKCKFSHN 121
>gi|259150256|emb|CAY87059.1| Yth1p [Saccharomyces cerevisiae EC1118]
Length = 208
Score = 46.2 bits (108), Expect = 0.079, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D+C++ H+ + C F++N C + +C + H SK P C
Sbjct: 67 CRHWLRGLCKKNDQCEYLHEYN--LRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKC 124
Query: 532 ENFVAKGFCNRGDNCLFSH 550
EN+ GFC G +C H
Sbjct: 125 ENY-EMGFCPLGSSCPRRH 142
Score = 41.2 bits (95), Expect = 2.4, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G C H +P+ ++ C H+ R C K D C + H+ L K P C F G+C
Sbjct: 46 CPRGPLCPKKH-VLPIFQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYC 104
Query: 541 NRGDNCLFSHKLP 553
+ +C + H P
Sbjct: 105 TQSPDCQYLHIDP 117
>gi|390604805|gb|EIN14196.1| hypothetical protein PUNSTDRAFT_49022 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 286
Score = 46.2 bits (108), Expect = 0.079, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLS-KYPCEN 533
C H+L+G C++GD C+F H+ + C +A+ C GD C + H K C +
Sbjct: 94 CKHWLRGLCKKGDACEFLHEYN--LRRMPECWWYAKYGYCSAGDECLYAHPKERKIECPD 151
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 152 Y-RRGFCKLGPTCPRKH 167
>gi|350644814|emb|CCD60480.1| ccr4-not transcription complex, putative [Schistosoma mansoni]
Length = 823
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 499 LTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPK 555
+ K +AC + R C K D C F HDL+K C+ F G C +G C F H PP+
Sbjct: 761 VAKWRRACSFYLRGHCKKED-CEFAHDLTKVTCK-FWEMGECFKGSTCPFLHGYPPE 815
>gi|307107504|gb|EFN55747.1| hypothetical protein CHLNCDRAFT_134088 [Chlorella variabilis]
Length = 409
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 448 KKRAEKNRQ--------LGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPL 499
KKRAE+ RQ + +++ K+P + PK++ C + G+C +G KCKFSHD
Sbjct: 72 KKRAEEERQKELNELFAMAIKQPKVPPGVDPKSI-LCEFHRHGQCTKGFKCKFSHDLAIE 130
Query: 500 TKSTKA 505
K+ KA
Sbjct: 131 RKTQKA 136
>gi|340515590|gb|EGR45843.1| predicted protein [Trichoderma reesei QM6a]
Length = 380
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 39/161 (24%)
Query: 432 SALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGR 483
SA + K A+K Q+E++K+A ++ + L K+P + PKTV C Y KG
Sbjct: 51 SAEDRRKAAEKAQREKEKKAAEDARRETEALLNKPAQIQKVPFGVDPKTV-VCIFYKKGD 109
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCH------------------FARNSCM------KGDN 519
C++G KCKF+HD K+ K + + + KG+
Sbjct: 110 CEKGKKCKFAHDLSIERKTEKKNLYTDVRQEEEEKKKQETSADWTEEQLLKVVLSKKGNQ 169
Query: 520 CPFDHDLSKYPCE-----NFVAKGFC-NRGDNCLFSHKLPP 554
+ KY + + C N GD C++ H LPP
Sbjct: 170 KTTTDKVCKYFIQAIEDGKYGWFWICPNGGDKCMYKHALPP 210
>gi|395837385|ref|XP_003791616.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Otolemur
garnettii]
Length = 492
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS P C+ + +G+C GD C + H P K+++
Sbjct: 71 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCK-YYQRGYCIYGDRCRYEHSKPLKQEE 126
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD L+ S C ++ R C+ GD C ++H
Sbjct: 71 CRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYYQRGYCIYGDRCRYEH 118
>gi|384493669|gb|EIE84160.1| hypothetical protein RO3G_08870 [Rhizopus delemar RA 99-880]
Length = 176
Score = 46.2 bits (108), Expect = 0.081, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENF 534
C Y K G C GD+C + H + K C +AR C G NC H + K C+N+
Sbjct: 4 CWFYSKYGECCNGDECMYLH--IDPESKQKECPWYARGFCKHGPNCRNKH-VRKLVCQNY 60
Query: 535 VAKGFCNRGDNCLFSH---KLPPKEQDPP 560
V GFC G NC H +LP PP
Sbjct: 61 VT-GFCPDGLNCPNGHPKYELPVMYTLPP 88
>gi|354546718|emb|CCE43450.1| hypothetical protein CPAR2_210940 [Candida parapsilosis]
Length = 220
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++GD C+F H+ + C +++N C +G C + H SK P C
Sbjct: 71 CKHWLRGLCKKGDHCEFLHEYN--LRKMPECLFYSKNGYCTQGSECLYQHIDPQSKIPEC 128
Query: 532 ENFVAKGFCNRGDNC 546
N+ A GFC G NC
Sbjct: 129 MNYNA-GFCAEGPNC 142
>gi|146324757|ref|XP_747350.2| CCCH zinc finger protein [Aspergillus fumigatus Af293]
gi|129556139|gb|EAL85312.2| CCCH zinc finger protein [Aspergillus fumigatus Af293]
gi|159123645|gb|EDP48764.1| CCCH zinc finger protein [Aspergillus fumigatus A1163]
Length = 452
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G C G C SH+ P + C HF RN C D C + H +
Sbjct: 278 PNKVAICKEFLQTGNCSAGQNCDLSHEPSP--HRSPVCVHFLRNRCSNPD-CRYSH-VRV 333
Query: 529 YP----CENFVAKGFCNRGDNCLFSH 550
P C +F G+C++G C H
Sbjct: 334 TPGAPVCRDFANLGYCDKGAECEQRH 359
>gi|237840275|ref|XP_002369435.1| zinc finger (CCCH type) protein, putative [Toxoplasma gondii ME49]
gi|211967099|gb|EEB02295.1| zinc finger (CCCH type) protein, putative [Toxoplasma gondii ME49]
gi|221483121|gb|EEE21445.1| zinc finger (CCCH type) protein [Toxoplasma gondii GT1]
gi|221504053|gb|EEE29730.1| zinc finger (CCCH type) protein [Toxoplasma gondii VEG]
Length = 110
Score = 46.2 bits (108), Expect = 0.083, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 474 KYCHHYLKGRCQEGDKCKFSHD-----TVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
K C +GRC+ G C+F+H T P T+ C F C +G+NC F H L
Sbjct: 29 KMCRFLRQGRCKHGASCQFAHSPEELRTPPNLTKTRLCRAFREGRCDRGENCAFAHGL 86
>gi|344289700|ref|XP_003416579.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Loxodonta africana]
Length = 269
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|6325364|ref|NP_015432.1| Yth1p [Saccharomyces cerevisiae S288c]
gi|74676379|sp|Q06102.1|YTH1_YEAST RecName: Full=mRNA 3'-end-processing protein YTH1; AltName:
Full=Yeast 30 kDa homolog 1
gi|914978|gb|AAB68077.1| Ypr107cp [Saccharomyces cerevisiae]
gi|45270012|gb|AAS56387.1| YPR107C [Saccharomyces cerevisiae]
gi|256269069|gb|EEU04406.1| Yth1p [Saccharomyces cerevisiae JAY291]
gi|285815629|tpg|DAA11521.1| TPA: Yth1p [Saccharomyces cerevisiae S288c]
gi|323302587|gb|EGA56394.1| Yth1p [Saccharomyces cerevisiae FostersB]
gi|323306840|gb|EGA60125.1| Yth1p [Saccharomyces cerevisiae FostersO]
gi|349581909|dbj|GAA27066.1| K7_Yth1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365762575|gb|EHN04109.1| Yth1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296110|gb|EIW07213.1| Yth1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 208
Score = 46.2 bits (108), Expect = 0.084, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D+C++ H+ + C F++N C + +C + H SK P C
Sbjct: 67 CRHWLRGLCKKNDQCEYLHEYN--LRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKC 124
Query: 532 ENFVAKGFCNRGDNCLFSH 550
EN+ GFC G +C H
Sbjct: 125 ENY-EMGFCPLGSSCPRRH 142
Score = 41.2 bits (95), Expect = 2.5, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G C H +P+ ++ C H+ R C K D C + H+ L K P C F G+C
Sbjct: 46 CPRGPLCPKKH-VLPIFQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYC 104
Query: 541 NRGDNCLFSHKLP 553
+ +C + H P
Sbjct: 105 TQSPDCQYLHIDP 117
>gi|302141758|emb|CBI18961.3| unnamed protein product [Vitis vinifera]
Length = 2149
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C ++L+G C + C + H V + + C F R C G+ C
Sbjct: 1957 KLTHKVIPERMPDCSYFLQGLCNN-ESCPYRH--VNVNPNASVCEGFLRGYCADGNECRK 2013
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
H Y C F A G C G C H
Sbjct: 2014 KHS---YVCPIFEATGSCPLGSKCKLHH 2038
>gi|149246628|ref|XP_001527739.1| hypothetical protein LELG_00259 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447693|gb|EDK42081.1| hypothetical protein LELG_00259 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 545
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 468 LKPKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
+K ++ C +Y + G CQ G C + HD + + K C HF + C+ C H
Sbjct: 225 IKTRSKPNCRYYTRTGICQRGASCNYFHDQLKI----KICPHFLNDKCIGNSMCLLSHRP 280
Query: 527 SKY--PCENFVAKGFCNRGDNCLFSHKLPPKEQDP 559
+++ P + +G C+ C + H PP +DP
Sbjct: 281 NEHNTPMCRYFLQGNCS-NTRCRYMHSTPPHFKDP 314
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTK----STKACCHFARNS-CMKGDNCPFDHDLSKYP 530
C ++L+G C +C++ H T P K C FA C +G CPF H +
Sbjct: 288 CRYFLQGNC-SNTRCRYMHSTPPHFKDPSCEVWVCRPFAIGGWCQRGRECPFMH---IWN 343
Query: 531 CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
C +F G C + CL +H+ + Q+
Sbjct: 344 CPDFEEDGECVQRSECLLNHQYTLRTQE 371
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD------- 525
+K C H+L +C C SH P +T C +F + +C C + H
Sbjct: 257 IKICPHFLNDKCIGNSMCLLSHR--PNEHNTPMCRYFLQGNC-SNTRCRYMHSTPPHFKD 313
Query: 526 --LSKYPCENFVAKGFCNRGDNCLFSH--KLPPKEQD 558
+ C F G+C RG C F H P E+D
Sbjct: 314 PSCEVWVCRPFAIGGWCQRGRECPFMHIWNCPDFEED 350
>gi|118344640|ref|NP_001072101.1| probable E3 ubiquitin-protein ligase makorin-2 [Takifugu rubripes]
gi|82232405|sp|Q5NU13.1|MKRN2_TAKRU RecName: Full=Probable E3 ubiquitin-protein ligase makorin-2
gi|56709993|dbj|BAD80900.1| makorin RING finger protein 2 [Takifugu rubripes]
Length = 402
Score = 46.2 bits (108), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C ++L G C+EG+ C+FSHD +K + C + R +C G+ C +DH
Sbjct: 8 CRYFLHGVCREGNHCQFSHDPSS-SKPSTICKFYQRGTCAYGERCRYDH 55
>gi|148702473|gb|EDL34420.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_b [Mus
musculus]
Length = 209
Score = 46.2 bits (108), Expect = 0.088, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C+ + KG C +G C H+ + C H+ R C K D C F H D+SK P
Sbjct: 8 CNFFAKGLCVKGMLCPLRHEQ---GEKLVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCY 64
Query: 534 FVAK-GFCNRGDNCLFSHKLPP-KEQDPP 560
F +K G C+ + CLF H P K QD P
Sbjct: 65 FHSKFGNCSNKE-CLFLHLKPVLKLQDCP 92
>gi|170104737|ref|XP_001883582.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641646|gb|EDR05906.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 330
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 26/121 (21%)
Query: 459 VRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKG 517
V+ K+P + PKTV C Y G C++G+KCKFSHD K K + +R ++
Sbjct: 64 VQTQKVPFGVDPKTV-LCAFYKAGNCEKGNKCKFSHDVNVGRKVEKKNLYADSREEKLED 122
Query: 518 DNCPFDHD------LSK---------YPCENFVAK------GF---CNRGDNCLFSHKLP 553
+D + LSK C++F+ G+ C G+NC + H LP
Sbjct: 123 TMENWDEEKLRSVVLSKAGNPRTTTDIVCKHFIQAIESQKFGWFWECPNGENCQYRHALP 182
Query: 554 P 554
P
Sbjct: 183 P 183
>gi|149755350|ref|XP_001494963.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Equus caballus]
gi|301777646|ref|XP_002924237.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Ailuropoda melanoleuca]
gi|348568558|ref|XP_003470065.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Cavia porcellus]
gi|410984387|ref|XP_003998510.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Felis catus]
gi|431908022|gb|ELK11629.1| Cleavage and polyadenylation specificity factor subunit 4 [Pteropus
alecto]
Length = 269
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|320591666|gb|EFX04105.1| ccch zinc finger DNA-binding protein [Grosmannia clavigera kw1407]
Length = 367
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 19/126 (15%)
Query: 382 SRGEEGISSFSAS----LDDSTVQKEVVKQRVTQEQGITTKDKLDSGACNKRKRSALSKE 437
++G+ G+ +A+ ++D T + K V ++Q + +L SG ++KR
Sbjct: 5 AQGKGGVGGKNAAATKQVEDRTFGMKNKKGAVAKKQIAALESQLKSGGNAEQKR------ 58
Query: 438 KKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGRCQEGDK 489
K+A+K +ER+K+A ++ + L K+P + PKTV C + KG C++G K
Sbjct: 59 KEAEKAAREREKKAAEDAKREADMLLSRPAQVQKVPFGVDPKTV-VCIFFKKGNCEKGKK 117
Query: 490 CKFSHD 495
CKFSHD
Sbjct: 118 CKFSHD 123
>gi|66773196|ref|NP_694510.1| probable E3 ubiquitin-protein ligase makorin-1 [Danio rerio]
gi|82226282|sp|Q4VBT5.1|MKRN1_DANRE RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|66267275|gb|AAH95243.1| Makorin, ring finger protein, 1 [Danio rerio]
gi|182889170|gb|AAI64736.1| Makorin, ring finger protein, 1 [Danio rerio]
Length = 439
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCEN-----FVAKGFCNRGDNCLFSHKLPPKEQDPP 560
C +F C +G+NC + HDLS C+ F KG C GD C + H P K+ +
Sbjct: 24 CRYFMHGLCKEGENCRYSHDLSS--CKQTMICKFFQKGCCAFGDRCRYEHTKPSKQDE-- 79
Query: 561 TPSTCTPELKPSPPLYASNL 580
P KPS PL A+ L
Sbjct: 80 -----VPSSKPSMPLTAAPL 94
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EG+ C++SHD + K T C F + C GD C ++H
Sbjct: 24 CRYFMHGLCKEGENCRYSHD-LSSCKQTMICKFFQKGCCAFGDRCRYEH 71
>gi|318187062|ref|NP_001187768.1| cleavage and polyadenylation specificity factor subunit 4
[Ictalurus punctatus]
gi|308323923|gb|ADO29097.1| cleavage and polyadenylation specificity factor subunit 4
[Ictalurus punctatus]
Length = 271
Score = 46.2 bits (108), Expect = 0.090, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 35/125 (28%)
Query: 469 KPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTK--------------------------- 501
+ KTV C H+L+G C++GD+C+F H+ +TK
Sbjct: 62 REKTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSKFGECSNKECPFLHIDPES 119
Query: 502 STKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH---KLP-PKEQ 557
K C + R C G +C H + C N++ GFC G +C F H +LP +
Sbjct: 120 KIKDCPWYDRGFCKHGPDCRHRHT-RRVICVNYLV-GFCPEGKSCKFMHPRFELPMGTNE 177
Query: 558 DPPTP 562
PP P
Sbjct: 178 QPPLP 182
Score = 41.6 bits (96), Expect = 2.0, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 499 LTKSTKACCHF-ARNSCMKGDNCPFDHDLSKYP---CENFVAKGFCNRGDNCLFSHK 551
+ KS A C F R++C+KG CPF H +S+ C++++ +G C +GD C F H+
Sbjct: 33 MDKSGAAVCEFFMRSACLKGGMCPFRH-ISREKTVVCKHWL-RGLCKKGDQCEFLHE 87
>gi|402224498|gb|EJU04560.1| hypothetical protein DACRYDRAFT_62698, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 314
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 41/125 (32%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDH------DLSK 528
C H+L+G C++G+ C+F H+ + C +A+ C GD C + H D
Sbjct: 119 CKHWLRGLCKKGESCEFLHEYN--LRKMPECWWYAKYGYCSAGDECLYTHPKERKIDCPD 176
Query: 529 Y-------------------PCENFVAKGFCNRGDNCLFSH---KLP---------PKEQ 557
Y PC+N+++ GFC G C +H +LP P+E
Sbjct: 177 YARGFCPLGPKCERKHARRVPCQNYLS-GFCPLGKECALAHPKWELPTKEEYESQQPREL 235
Query: 558 DPPTP 562
PP P
Sbjct: 236 GPPPP 240
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 503 TKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQ 557
T C H+ R C KG++C F H+ L K P C + G+C+ GD CL++H PKE+
Sbjct: 116 TTVCKHWLRGLCKKGESCEFLHEYNLRKMPECWWYAKYGYCSAGDECLYTH---PKER 170
>gi|346972208|gb|EGY15660.1| mRNA 3'-end-processing protein YTH1 [Verticillium dahliae VdLs.17]
Length = 395
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 506 CCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
C H+ R C KG +C F H+ L K P C F G+C+ G+ CL+ H + P+ + PP P
Sbjct: 204 CKHWLRGLCKKGAHCEFLHEYNLRKMPECNFFTRNGYCSNGEECLYLH-IDPQSKLPPCP 262
>gi|156098889|ref|XP_001615460.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804334|gb|EDL45733.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 2172
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 27/123 (21%)
Query: 454 NRQLGVRRLKLPQN-LKPKT----------VKYCHHYLKGRCQEGDKCKFSHDTVPLTK- 501
N++ G+R LP++ PK +K C KG CQ+GD C ++H L
Sbjct: 473 NKEQGMRIGALPKDRYYPKGKEKIHDQYYRIKLCPFLKKGLCQKGDNCSYAHSADTLRSC 532
Query: 502 ----STKACCHFARNSCMKGDNCPFDH---DLSKYP-------CENFVAKGFCNRGDNCL 547
TK C + +N C + NC + H +L P C+ F +G C GD C
Sbjct: 533 MNLMKTKICQLWLKNEC-RNPNCVYAHGEGELRATPDYFKTKLCKYFDKEGTCPSGDKCR 591
Query: 548 FSH 550
+H
Sbjct: 592 HAH 594
>gi|11037482|gb|AAG27598.1|AF277173_1 Makorin RING zinc-finger protein 1 [Danio rerio]
Length = 442
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCEN-----FVAKGFCNRGDNCLFSHKLPPKEQDPP 560
C +F C +G+NC + HDLS C+ F KG C GD C + H P K+ +
Sbjct: 27 CRYFMHGLCKEGENCRYSHDLSS--CKQTMICKFFQKGCCAFGDRCRYEHTKPSKQDE-- 82
Query: 561 TPSTCTPELKPSPPLYASNL 580
P KPS PL A+ L
Sbjct: 83 -----VPSSKPSMPLTAAPL 97
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EG+ C++SHD + K T C F + C GD C ++H
Sbjct: 27 CRYFMHGLCKEGENCRYSHD-LSSCKQTMICKFFQKGCCAFGDRCRYEH 74
>gi|156088693|ref|XP_001611753.1| YT521-B-like family protein [Babesia bovis]
gi|154799007|gb|EDO08185.1| YT521-B-like family protein [Babesia bovis]
Length = 427
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 501 KSTKACCHFARNSCMKGDNCPFDHDLSKY---PCENFVAKGFC--NRGDNCLFSHKLPPK 555
K + C H+ + CMKG+ C F H L PC F GFC N+ NC+F H +
Sbjct: 63 KHSVVCRHWLKGMCMKGEFCDFLHQLVYSRMPPCRLFEKNGFCIDNQRGNCIFQHIVEQP 122
Query: 556 E----QDP 559
E QDP
Sbjct: 123 ESITAQDP 130
>gi|82705665|ref|XP_727062.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482732|gb|EAA18627.1| asparagine-rich protein, putative [Plasmodium yoelii yoelii]
Length = 674
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 19/129 (14%)
Query: 454 NRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSH-----DTVPLTKSTKACCH 508
N Q + ++P+ + K C + GRC G C F+H + +P T C
Sbjct: 7 NNQSPLVVTQIPRKKQFYKTKMCPWFFSGRCDRGIDCLFAHSQEELNPIPDLSFTSLCPL 66
Query: 509 FARNSCMKGDNCPFDH---------DLSKY-PCENFVAKGFCNRGDNCLFSHKLPPKEQD 558
++ K +NC + H DL K PC F+ +G CN +C +H + E+
Sbjct: 67 AKKSGLCKNENCSYAHSVCELRPTGDLYKTAPCTKFL-RGKCNAESHCRHAHYI---EEL 122
Query: 559 PPTPSTCTP 567
P P +P
Sbjct: 123 RPLPGNISP 131
>gi|70949759|ref|XP_744261.1| zinc finger protein [Plasmodium chabaudi chabaudi]
gi|56524141|emb|CAH79399.1| zinc finger protein, putative [Plasmodium chabaudi chabaudi]
Length = 639
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 73/184 (39%), Gaps = 37/184 (20%)
Query: 454 NRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSH----DTVPLTKSTKACCHF 509
N Q + ++P+ + K C + GRC G C F+H + +P T C
Sbjct: 7 NNQSPLVVTQIPRKKQFYKTKMCPWFFSGRCDRGIDCLFAHSQRLNPIPDLSFTSLCPLA 66
Query: 510 ARNSCMKGDNCPFDH---------DLSKY-PCENFVAKGFCNRGDNCLFSHKLPPKEQDP 559
++ K + C + H DL K PC F+ +G CN +C +H + E+
Sbjct: 67 KKSGLCKNEKCSYAHSVCELRPTGDLYKTAPCTKFL-RGKCNAESHCRHAHYI---EELR 122
Query: 560 PTPSTCTP-----ELKPSPPLYAS--NLLKP------------LNNNKVSHQNVDALSNH 600
P P +P L + PL AS + KP LNNN V +N L N
Sbjct: 123 PLPGNISPSQNAINLMLAAPLTASMQKISKPKNNFFMDENRGNLNNNGVGKKNEKDLKNS 182
Query: 601 GKVS 604
+S
Sbjct: 183 TSIS 186
>gi|355561051|gb|EHH17737.1| hypothetical protein EGK_14199, partial [Macaca mulatta]
Length = 479
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 508 HFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
+F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 60 YFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 113
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 60 YFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 105
>gi|343426681|emb|CBQ70210.1| related to Cleavage and polyadenylation specificity factor
[Sporisorium reilianum SRZ2]
Length = 377
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 505 ACCHFARNSCMKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
C H+ R C KGD C + H D+ + P C + GFCN GD+CL+ H P
Sbjct: 109 VCKHWLRGLCKKGDQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHVDP 160
>gi|397484819|ref|XP_003813565.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Pan paniscus]
Length = 607
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 508 HFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
+F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 188 YFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 241
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 188 YFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 233
>gi|291391880|ref|XP_002712374.1| PREDICTED: HSPC303-like [Oryctolagus cuniculus]
Length = 426
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 48/122 (39%), Gaps = 31/122 (25%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGD--- 518
K+ + PK+V C + +G+C +GDKCKFSHD K K + AR+ ++ D
Sbjct: 93 KISKGADPKSV-VCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMD 151
Query: 519 -----------NCPFDHDLSKYPCENFVAKGFCNR---------------GDNCLFSHKL 552
N K P V K F GDNC++ H L
Sbjct: 152 NWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDNCMYRHAL 211
Query: 553 PP 554
PP
Sbjct: 212 PP 213
>gi|294938300|ref|XP_002782101.1| hypothetical protein Pmar_PMAR009686 [Perkinsus marinus ATCC 50983]
gi|239893511|gb|EER13896.1| hypothetical protein Pmar_PMAR009686 [Perkinsus marinus ATCC 50983]
Length = 341
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 20/104 (19%)
Query: 498 PLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQ 557
P K + C + R C+KGD CP+ H + + C + KG C G++C F H
Sbjct: 158 PNDKKGEVCRNNLRGRCLKGDKCPYKH-IDRESCRMWEEKGQCRFGESCKFKHS------ 210
Query: 558 DPPTPSTCTPELKPSPPLYASNLLKPLNNNKVSHQNVDALSNHG 601
KPSP AS KP + Q + A+SN G
Sbjct: 211 ------------KPSPRAGASTGEKPSAGGRQRDQ-LKAISNDG 241
>gi|325091430|gb|EGC44740.1| CCCH zinc finger domain-containing protein [Ajellomyces capsulatus
H88]
Length = 454
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 432 SALSKEKKAK-KKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLK-GRCQEGDK 489
S +S++K KK+ ER KR + P P V C +L+ G+C G
Sbjct: 237 SVVSRKKTGTVKKKNERCKRFTSTGSC-FKGPNCPYIHDPNKVAICKEFLQTGKCAAGSA 295
Query: 490 CKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---DLSKYPCENFVAKGFCNRGDNC 546
C SH++ + + +C HF R C +C + H + C +F G+C++G+NC
Sbjct: 296 CDLSHESS--AERSPSCLHFLRGRC-SNPSCRYAHVRVNPGAPVCHDFAILGYCSKGENC 352
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 513 SCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSH 550
SC KG NCP+ HD +K C+ F+ G C G C SH
Sbjct: 262 SCFKGPNCPYIHDPNKVAICKEFLQTGKCAAGSACDLSH 300
>gi|307200583|gb|EFN80724.1| Cleavage and polyadenylation specificity factor subunit 4
[Harpegnathos saltator]
Length = 285
Score = 45.8 bits (107), Expect = 0.095, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCEN-- 533
C H+L+G C++GD+C+F H+ +TK + C ++R + CPF H + +
Sbjct: 68 CKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSRFNACHNKECPFLHIDPETKVRDCP 125
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 126 WYDRGFCRHGPLCRHRH 142
Score = 45.8 bits (107), Expect = 0.11, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYPCEN 533
C Y +G C +G C F H T C H+ R C KGD C F H D++K P
Sbjct: 41 CQFYPRGTCVKGASCPFRHVR---GDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 97
Query: 534 FVAKGFCNRGDNCLFSHKLP-PKEQDPP 560
F ++ C F H P K +D P
Sbjct: 98 FYSRFNACHNKECPFLHIDPETKVRDCP 125
>gi|281340120|gb|EFB15704.1| hypothetical protein PANDA_002105 [Ailuropoda melanoleuca]
Length = 421
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 508 HFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
+F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 2 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 55
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
+++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 2 YFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCIYGDRCRYEH 47
>gi|126334486|ref|XP_001363797.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Monodelphis domestica]
gi|395514828|ref|XP_003761614.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Sarcophilus harrisii]
Length = 269
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSC 514
+QLG + L P + C +LK C +G C F H + + T C H+ R C
Sbjct: 21 QQLGAQPLPFP-GMDKSGAAVCEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLC 76
Query: 515 MKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
KGD C F H D++K P C + G C+ + C F H P
Sbjct: 77 KKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE-CPFLHIDP 117
>gi|351701509|gb|EHB04428.1| E3 ubiquitin-protein ligase makorin-1 [Heterocephalus glaber]
Length = 426
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 508 HFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPK-EQDPPTP 562
+F C +GDNC + HDLS P C+ F +G+C GD C + H P K E+ T
Sbjct: 8 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEEAAATD 66
Query: 563 STCTPELKPSPPLYASNLLKPLNNNKVSHQNV 594
P L + L + L +N +N
Sbjct: 67 LPAKPSLAATSSLSVAGALVEINMGDAESRNA 98
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
Query: 476 CH--HYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
CH +++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 4 CHIRYFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 53
>gi|321451354|gb|EFX63036.1| hypothetical protein DAPPUDRAFT_336030 [Daphnia pulex]
Length = 1182
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 20/74 (27%)
Query: 455 RQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHD--TVPLTKSTKACCHFARN 512
+Q VRR K P C +++G C+ D CKFSHD ++P C + +
Sbjct: 896 KQQTVRRPKRP----------CSFFVEGECRRPD-CKFSHDLGSIP-------CRFWIES 937
Query: 513 SCMKGDNCPFDHDL 526
SC KG+ CPF H +
Sbjct: 938 SCFKGEECPFLHGI 951
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 499 LTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKE 556
+ + + C F C + D C F HDL PC F + C +G+ C F H +P E
Sbjct: 900 VRRPKRPCSFFVEGECRRPD-CKFSHDLGSIPC-RFWIESSCFKGEECPFLHGIPVAE 955
>gi|396472398|ref|XP_003839099.1| hypothetical protein LEMA_P027720.1 [Leptosphaeria maculans JN3]
gi|312215668|emb|CBX95620.1| hypothetical protein LEMA_P027720.1 [Leptosphaeria maculans JN3]
Length = 327
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLSKYPCENF 534
C H+ GRC D+C+F+H + + + C F R C+KGDNC +L + C F
Sbjct: 196 CLHFQDGRCNN-DECRFAH--IRVNPAALNCEAFGRLGYCVKGDNCA---ELHAHECPTF 249
Query: 535 VAKGFCNRGDNCLFSH 550
G C+ GD C H
Sbjct: 250 SNTGDCSYGDKCRLGH 265
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 461 RLKLPQNLKPKTVKYCHHYL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDN 519
R P + P C +L K C +G+ C SH ++ C HF C D
Sbjct: 152 RHACPYHHDPNKQAICKRWLYKDDCPKGEFCPLSHTAT--AENAPTCLHFQDGRC-NNDE 208
Query: 520 CPFDH---DLSKYPCENFVAKGFCNRGDNC--LFSHKLP 553
C F H + + CE F G+C +GDNC L +H+ P
Sbjct: 209 CRFAHIRVNPAALNCEAFGRLGYCVKGDNCAELHAHECP 247
>gi|226293530|gb|EEH48950.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 354
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 37/160 (23%)
Query: 431 RSALSKEKKAKKKQKERKKRAEKNRQLGVRRL-------KLPQNLKPKTVKYCHHYLKGR 483
++A K+K+A++ Q+E+ K A + + L K+P + PKTV C + KG
Sbjct: 41 KTADDKKKEAQRIQREKDKAAAEQAKREAAELFKPVQVQKVPFGVDPKTV-LCVFFKKGS 99
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCH----FA-----------------RNSCMKGDNCP- 521
C++G KCKFSHD+ K+ K + +A RN + P
Sbjct: 100 CEKGKKCKFSHDSAVERKAQKKDLYSDSRYAEEDKKLDLMDNWDEEKLRNVVLSKHGNPK 159
Query: 522 -FDHDLSKY---PCENFVAKGFC---NRGDNCLFSHKLPP 554
+ KY EN F N GD C++ H LPP
Sbjct: 160 TTTDKVCKYFIEAVENQKYGWFWVCPNGGDKCMYKHSLPP 199
>gi|168001521|ref|XP_001753463.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695342|gb|EDQ81686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 981
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCH-FARNSCMKGDNCPFDHDLSKYPCENF 534
C H+L+G C +GD C F H K+ C FA+ + +C + H N
Sbjct: 63 CRHWLRGLCMKGDACGFLHQ---FDKARMPVCRFFAKFGECREPDCIYKHTNEDIKECNM 119
Query: 535 VAKGFCNRGDNCLFSH-KLP 553
GFC G +C + H KLP
Sbjct: 120 YKLGFCPNGPDCRYRHQKLP 139
>gi|406866501|gb|EKD19541.1| CCCH zinc finger DNA binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 460
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 474 KYCH-HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLSKYPC 531
K C+ HYL+G C +GD+C F H P + KA + R N C+ G C ++ + + C
Sbjct: 355 KLCNNHYLRGPCAKGDECCFEHKYKPTDEDLKAIAYLTRLNPCLNGQECELEYCIYGHHC 414
>gi|378755778|gb|EHY65804.1| zinc finger protein [Nematocida sp. 1 ERTm2]
Length = 159
Score = 45.8 bits (107), Expect = 0.099, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 28/101 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSH----DTVPL----------------------TKSTKACCHF 509
C H+L+G C++GD C+F H D +P +K C +
Sbjct: 32 CKHWLRGLCKKGDVCEFLHVYALDKMPECWFFSKYGECSNQDCLFLHIDPNSKSKECIWY 91
Query: 510 ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
R C G++C H K C N+ A GFC G C + H
Sbjct: 92 TRGFCRHGNSCRNKH-YKKRMCFNYEA-GFCPLGKKCPYGH 130
>gi|225680285|gb|EEH18569.1| mRNA export protein [Paracoccidioides brasiliensis Pb03]
Length = 354
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 41/162 (25%)
Query: 431 RSALSKEKKAKKKQKERKKRAEKNRQLGVRRL-------KLPQNLKPKTVKYCHHYLKGR 483
++A K+K+A++ Q+E+ K A + + L K+P + PKTV C + KG
Sbjct: 41 KTADDKKKEAQRIQREKDKAAAEQAKREAAELFKPVQVQKVPFGVDPKTV-LCVFFKKGS 99
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKG------DNCPFDHD------LSKYP- 530
C++G KCKFSHD+ K+ K + + DN +D + LSK+
Sbjct: 100 CEKGKKCKFSHDSAVERKAQKKDLYSDSRDAEEDKKLDLMDN--WDEEKLRNVVLSKHGN 157
Query: 531 --------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C++ H LPP
Sbjct: 158 PKTTTDKVCKYFIEAVENQKYGWFWVCPNGGDKCMYKHSLPP 199
>gi|156849163|ref|XP_001647462.1| hypothetical protein Kpol_1018p142 [Vanderwaltozyma polyspora DSM
70294]
gi|156118148|gb|EDO19604.1| hypothetical protein Kpol_1018p142 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 45.8 bits (107), Expect = 0.099, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G+ C H +P+ ++ C H+ R C K DNC + H+ L K P C F GFC
Sbjct: 45 CPRGNNCHKKH-VLPIFQNKIVCKHWLRGLCKKNDNCEYLHEYNLRKMPECVFFSKNGFC 103
Query: 541 NRGDNCLFSHKLP 553
+ C + H P
Sbjct: 104 TQTPECQYLHIDP 116
>gi|365757902|gb|EHM99773.1| Yth1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401838431|gb|EJT42071.1| YTH1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 208
Score = 45.8 bits (107), Expect = 0.10, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D+C++ H+ + C F++N C + +C + H SK P C
Sbjct: 67 CRHWLRGLCKKNDQCEYLHEYN--LRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKC 124
Query: 532 ENFVAKGFCNRGDNCLFSH 550
EN+ GFC G C H
Sbjct: 125 ENY-EMGFCPLGSTCPRRH 142
Score = 41.2 bits (95), Expect = 2.4, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G C H +P+ ++ C H+ R C K D C + H+ L K P C F G+C
Sbjct: 46 CPRGPLCPKKH-VLPIFQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYC 104
Query: 541 NRGDNCLFSHKLPPKEQDP----------PTPSTC 565
+ +C + H + P + P P STC
Sbjct: 105 TQSPDCQYLH-IDPASKIPKCENYEMGFCPLGSTC 138
>gi|119484620|ref|XP_001262089.1| CCCH zinc finger protein [Neosartorya fischeri NRRL 181]
gi|119410245|gb|EAW20192.1| CCCH zinc finger protein [Neosartorya fischeri NRRL 181]
Length = 452
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G C G C SH+ P + C HF RN C D C + H +
Sbjct: 278 PNKVAICKEFLQTGNCSAGQNCDLSHEPSP--HRSPVCVHFLRNRCSNPD-CRYSH-VRV 333
Query: 529 YP----CENFVAKGFCNRGDNCLFSH 550
P C +F G+C++G C H
Sbjct: 334 TPGAPVCRDFANLGYCDKGAECEERH 359
>gi|448114500|ref|XP_004202591.1| Piso0_001434 [Millerozyma farinosa CBS 7064]
gi|359383459|emb|CCE79375.1| Piso0_001434 [Millerozyma farinosa CBS 7064]
Length = 340
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 457 LGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHD 495
LG+++ K+P + PKTV C + KG C +G KCKFSHD
Sbjct: 81 LGIQQQKVPFGVDPKTV-LCEFFKKGVCSKGSKCKFSHD 118
>gi|440902733|gb|ELR53486.1| E3 ubiquitin-protein ligase makorin-1, partial [Bos grunniens
mutus]
Length = 419
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 508 HFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
+F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 2 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 55
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+++ G C+EGD C++SHD + + C +F R C+ GD C ++H
Sbjct: 2 YFMHGVCKEGDNCRYSHD-LSDSPYGVVCKYFQRGYCIYGDRCRYEH 47
>gi|242210067|ref|XP_002470878.1| predicted protein [Postia placenta Mad-698-R]
gi|220730105|gb|EED83968.1| predicted protein [Postia placenta Mad-698-R]
Length = 213
Score = 45.8 bits (107), Expect = 0.10, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLS-KYPCEN 533
C H+L+G C++GD C+F H+ + C +A+ C GD C + H + C +
Sbjct: 81 CKHWLRGLCKKGDACEFLHEYN--LRRMPDCWWYAKYGYCSAGDECLYAHPKERRIECPD 138
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G +C H
Sbjct: 139 Y-NRGFCKLGPDCPRKH 154
>gi|413954696|gb|AFW87345.1| hypothetical protein ZEAMMB73_473743 [Zea mays]
Length = 1192
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C ++L+G C C + H V + + C F + C GD C
Sbjct: 1002 KLTHKVLPERMPDCSYFLQGLCT-NTACPYRH--VKVNSNAPVCEDFLKGYCADGDECRK 1058
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
H Y C F A G C +G C H
Sbjct: 1059 KHS---YVCLVFEATGECPQGSRCKLHH 1083
>gi|357127870|ref|XP_003565600.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like
[Brachypodium distachyon]
Length = 1004
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 503 TKACCHFARNSCMKGDNCPFDHD--LSKYPCENFVAKGFCNRGDNCLFSH 550
++ C F R SC +GD CPF H K C F+ C G++C FSH
Sbjct: 723 SEMCVFFVRGSCTRGDTCPFSHSSRARKPVCMFFLTLQGCRNGNSCSFSH 772
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 445 KERKKRAEKNRQLGVRRLKLPQNLKPKT-VKYCHHYLKGRCQEGDKCKFSHDTVPLTKST 503
KE K + +++++ R ++P +K + C +++G C GD C FSH +++
Sbjct: 695 KEMKTQLAEDKKVSCRE-QVPGYVKQAFESEMCVFFVRGSCTRGDTCPFSHS----SRAR 749
Query: 504 KACCHF--ARNSCMKGDNCPFDHD 525
K C F C G++C F HD
Sbjct: 750 KPVCMFFLTLQGCRNGNSCSFSHD 773
>gi|297851474|ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
lyrata]
gi|297339460|gb|EFH69877.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
lyrata]
Length = 631
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR--NSCMKGDNCPFDHDLSKYPCEN 533
C H+L+G C +GD C F H K+ C F R C + D C + H N
Sbjct: 66 CRHWLRGLCMKGDACGFLHQ---YDKARMPICRFFRLYGECREQD-CVYKHTNEDIKECN 121
Query: 534 FVAKGFCNRGDNCLFSH 550
GFC G +C + H
Sbjct: 122 MYKLGFCPNGPDCRYRH 138
>gi|168004103|ref|XP_001754751.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693855|gb|EDQ80205.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 643
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 504 KACCHFAR-NSCMKGDNCPFDHDLS------KYPCENFVAKGFCNRGDNCLFSHKL 552
+ C F + SC +G+ C F HDL K C +FV KG C +G +C F H L
Sbjct: 350 RVCFEFVKQGSCSRGETCKFKHDLGNGVPIPKGACFDFVTKGRCEKGADCRFKHSL 405
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 474 KYCHHYLK-GRCQEGDKCKFSHDT---VPLTKSTKACCHFA-RNSCMKGDNCPFDHDLSK 528
+ C ++K G C G+ CKF HD VP+ K AC F + C KG +C F H L
Sbjct: 350 RVCFEFVKQGSCSRGETCKFKHDLGNGVPIPKG--ACFDFVTKGRCEKGADCRFKHSLED 407
Query: 529 Y 529
+
Sbjct: 408 W 408
>gi|388856586|emb|CCF49892.1| related to cleavage and polyadenylation specificity factor
[Ustilago hordei]
Length = 405
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 506 CCHFARNSCMKGDNCPFDH--DLSKYP-CENFVAKGFCNRGDNCLFSHKLP 553
C H+ R C KGD C + H D+ + P C + GFCN GD+CL+ H P
Sbjct: 110 CKHWLRGLCKKGDQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHVHP 160
>gi|448111927|ref|XP_004201964.1| Piso0_001434 [Millerozyma farinosa CBS 7064]
gi|359464953|emb|CCE88658.1| Piso0_001434 [Millerozyma farinosa CBS 7064]
Length = 341
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 457 LGVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHD 495
LG+++ K+P + PKTV C + KG C +G KCKFSHD
Sbjct: 82 LGIQQQKVPFGVDPKTV-LCEFFKKGVCSKGSKCKFSHD 119
>gi|347837114|emb|CCD51686.1| similar to C-x8-C-x5-C-x3-H type zinc finger protein [Botryotinia
fuckeliana]
Length = 465
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 472 TVKYCH-HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLSKY 529
T K C+ HYL+G C +GD+C F HD + KA + R N C+ G +C + + +
Sbjct: 360 TNKLCNNHYLRGPCSKGDECCFEHDHKATEEEIKAIAYLTRQNPCVNGQDCDNEECIYGH 419
Query: 530 PCENFVAKGFCNRGDNCL-FSHKLPPKEQDPP 560
C + V + C+ F+ K KE PP
Sbjct: 420 HCPSVVIPSVGPKEPTCMAFACKF-YKEDHPP 450
>gi|339258914|ref|XP_003369643.1| zinc finger CCCH domain-containing protein 15 [Trichinella
spiralis]
gi|316966067|gb|EFV50701.1| zinc finger CCCH domain-containing protein 15 [Trichinella
spiralis]
Length = 402
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 29/120 (24%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
K+ + + PK+V C + +G C +GDKCKFSHD KS K ++ R DN
Sbjct: 104 KISKEVDPKSV-LCLFFKQGMCSKGDKCKFSHDRSIEGKSQKRSVYYDRREMTDQDNLEN 162
Query: 523 --DHDLSKY------------PCENFVAKGF--------------CNRGDNCLFSHKLPP 554
D L++ P + K F C G+ C++ H +PP
Sbjct: 163 WDDEKLNEVVQKKHAESDKNKPKTAIICKFFLQALEESKYGWFWECPSGEKCIYRHAIPP 222
>gi|401623156|gb|EJS41263.1| yth1p [Saccharomyces arboricola H-6]
Length = 208
Score = 45.8 bits (107), Expect = 0.11, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D+C++ H+ + C F++N C + +C + H SK P C
Sbjct: 67 CRHWLRGLCKKNDQCEYLHEYN--LRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKC 124
Query: 532 ENFVAKGFCNRGDNCLFSH 550
EN+ GFC G C H
Sbjct: 125 ENY-EMGFCPLGSTCPRRH 142
Score = 41.6 bits (96), Expect = 1.9, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G C H +P+ ++ C H+ R C K D C + H+ L K P C F G+C
Sbjct: 46 CPRGSLCPKKH-VLPIFQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYC 104
Query: 541 NRGDNCLFSHKLP 553
+ +C + H P
Sbjct: 105 TQSPDCQYLHIDP 117
>gi|393211621|gb|EJC97472.1| hypothetical protein FOMMEDRAFT_137600 [Fomitiporia mediterranea
MF3/22]
Length = 248
Score = 45.8 bits (107), Expect = 0.11, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 465 PQNLKP------------KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR- 511
PQN +P + C H+L+G C++GD C+F H+ + C +A+
Sbjct: 72 PQNFQPPKQVSMHPRDRKRLATVCKHWLRGLCKKGDACEFLHEYN--LRRMPECWWYAKF 129
Query: 512 NSCMKGDNCPFDH-DLSKYPCENFVAKGFCNRGDNCLFS 549
C GD C + H K C ++ +GFC G F+
Sbjct: 130 GYCQAGDECLYAHPKEKKIECPDY-KRGFCKLGTCSFFN 167
Score = 45.4 bits (106), Expect = 0.12, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 506 CCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
C H+ R C KGD C F H+ L + P C + G+C GD CL++H PKE+ P
Sbjct: 95 CKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKFGYCQAGDECLYAH---PKEKKIECP 151
>gi|148681660|gb|EDL13607.1| makorin, ring finger protein, 1, isoform CRA_c [Mus musculus]
Length = 419
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 508 HFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
+F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 1 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCVYGDRCRYEHSKPLKQEE 54
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
+++ G C+EGD C++SHD L+ S C +F R C+ GD C ++H
Sbjct: 1 YFMHGVCKEGDNCRYSHD---LSDSPYGVVCKYFQRGYCVYGDRCRYEH 46
>gi|347830972|emb|CCD46669.1| hypothetical protein [Botryotinia fuckeliana]
Length = 277
Score = 45.8 bits (107), Expect = 0.11, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 23/101 (22%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK---ACCHFARNSCMKGDNCPFDHD--LSKYP 530
C YL+G C G C H P C H+ R C KG+ C F H+ L K P
Sbjct: 55 CKAYLQGHCPLGTNCPDKHAANPNNSWNFNNMVCKHWLRGLCKKGETCEFLHEFNLRKMP 114
Query: 531 -CENFVAKGFCNRG-----------------DNCLFSHKLP 553
C FV G+C+ G D CL+ H P
Sbjct: 115 ECNFFVKNGYCSNGGTFVWLSDAPRVTLTSLDECLYLHVDP 155
>gi|350581420|ref|XP_003481031.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Sus scrofa]
Length = 422
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSKYP-CE 532
C +LK C +G C F H + + T C H+ R C KGD C F H D++K P C
Sbjct: 194 CEFFLKAACGKGGMCPFRHIS---GEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 250
Query: 533 NFVAKGFCNRGDNCLFSHKLP 553
+ G C+ C F H P
Sbjct: 251 FYSKFGECSN-KECPFLHIDP 270
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 217 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 273
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 274 IKDCPWYDRGFCKHGPLCRHRH 295
>gi|320031725|gb|EFW13684.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392864584|gb|EAS27522.2| hypothetical protein CIMG_09790 [Coccidioides immitis RS]
Length = 352
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 30/121 (24%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF----ARNSCMKGD 518
K+P + PKTV C + KG C++G KCKFSHD K+ K + A N
Sbjct: 85 KVPFGVDPKTV-LCIFFKKGTCEKGKKCKFSHDPAVERKAEKRDLYSDSRDAENDKQNDT 143
Query: 519 NCPFDHD------LSKYP---------CENFVAK------GF---C-NRGDNCLFSHKLP 553
+D D LSK+ C+ F+ G+ C N GD C++ H LP
Sbjct: 144 MDSWDEDKLRKVVLSKHGNPRTTTDKVCKYFIEAVENQKYGWFWTCPNGGDKCMYKHSLP 203
Query: 554 P 554
P
Sbjct: 204 P 204
>gi|345310735|ref|XP_001521535.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Ornithorhynchus anatinus]
Length = 241
Score = 45.8 bits (107), Expect = 0.12, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH-----D 525
KTV C H+L+G C++GD+C+F H +TK + C F+ CPF H
Sbjct: 58 KTV-VCKHWLRGLCKKGDQCEFLHQ-YDVTKMPE-CYFFSNFGKCSNKECPFLHVDPASR 114
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
L P N +GFC G C + H
Sbjct: 115 LRDCPWYN---QGFCKNGPLCKYQH 136
>gi|225459673|ref|XP_002284626.1| PREDICTED: uncharacterized protein LOC100262507 [Vitis vinifera]
Length = 2260
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C ++L+G C + C + H V + + C F R C G+ C
Sbjct: 2068 KLTHKVIPERMPDCSYFLQGLCNN-ESCPYRH--VNVNPNASVCEGFLRGYCADGNECRK 2124
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
H Y C F A G C G C H
Sbjct: 2125 KHS---YVCPIFEATGSCPLGSKCKLHH 2149
>gi|119176086|ref|XP_001240169.1| hypothetical protein CIMG_09790 [Coccidioides immitis RS]
gi|303318201|ref|XP_003069100.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108786|gb|EER26955.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 346
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 30/121 (24%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF----ARNSCMKGD 518
K+P + PKTV C + KG C++G KCKFSHD K+ K + A N
Sbjct: 79 KVPFGVDPKTV-LCIFFKKGTCEKGKKCKFSHDPAVERKAEKRDLYSDSRDAENDKQNDT 137
Query: 519 NCPFDHD------LSKYP---------CENFVAK------GF---C-NRGDNCLFSHKLP 553
+D D LSK+ C+ F+ G+ C N GD C++ H LP
Sbjct: 138 MDSWDEDKLRKVVLSKHGNPRTTTDKVCKYFIEAVENQKYGWFWTCPNGGDKCMYKHSLP 197
Query: 554 P 554
P
Sbjct: 198 P 198
>gi|225561989|gb|EEH10269.1| CCCH zinc finger protein [Ajellomyces capsulatus G186AR]
Length = 491
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 429 RKRSALSKEKKAK-KKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLK-GRCQE 486
R S +S++K KK+ ER KR + P P V C +L+ G+C
Sbjct: 271 RLGSVVSRKKTGTVKKKNERCKRFTSTGSC-FKGPNCPYIHDPNKVAICKEFLQTGKCAA 329
Query: 487 GDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---DLSKYPCENFVAKGFCNRG 543
G C SH+ P + + +C HF R C +C + H + C +F G+C++G
Sbjct: 330 GSACDLSHE--PSAERSPSCLHFLRGRC-SNPSCRYAHVRVNPGAPVCHDFAILGYCSKG 386
Query: 544 DNC 546
+ C
Sbjct: 387 EIC 389
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 513 SCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDP 559
SC KG NCP+ HD +K C+ F+ G C G C SH+ P E+ P
Sbjct: 299 SCFKGPNCPYIHDPNKVAICKEFLQTGKCAAGSACDLSHE-PSAERSP 345
>gi|328857276|gb|EGG06393.1| hypothetical protein MELLADRAFT_36170 [Melampsora larici-populina
98AG31]
Length = 315
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
Query: 429 RKRSALSKEK----KAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRC 484
+ + ++KEK K ++K++ERK++ E Q + +++P PKTV C ++ G C
Sbjct: 48 KSKEVMAKEKARMDKEREKEQERKRKEE--LQALFQPVQVPFGTDPKTV-LCQNFKAGHC 104
Query: 485 QEGDKCKFSHDTVPLTKSTK 504
++G+KCKFSHD K+TK
Sbjct: 105 EKGNKCKFSHDLDIGRKTTK 124
>gi|326473246|gb|EGD97255.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Trichophyton tonsurans CBS 112818]
Length = 244
Score = 45.4 bits (106), Expect = 0.12, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKAC-------CHFARNSCMKGDNCPFDHD 525
V C Y +G C G C H T P ST + H + C KG C + H+
Sbjct: 43 VPVCKAYREGHCPLGPLCAERHPT-PSRISTSSSPAIAPSSTHGSLGLCKKGLKCEYLHE 101
Query: 526 --LSKYP-CENFVAKGFCNRGDNCLFSH-----KLPPKEQ 557
L + P C++F GFC GD+CL+ H KLP E
Sbjct: 102 YNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCEH 141
>gi|327271309|ref|XP_003220430.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Anolis
carolinensis]
Length = 416
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTC 565
C +FAR +C G NC F HD + GFC GD C + H L + P S C
Sbjct: 25 CRNFARGACRWGQNCRFSHDRKATQICKYFQNGFCGYGDRCSYQHIL-----EAPALSRC 79
Query: 566 TPELKPSPPLYASNLL 581
E P L S LL
Sbjct: 80 GSE-SDRPALLGSMLL 94
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL 526
C ++ +G C+ G C+FSHD K+T+ C +F C GD C + H L
Sbjct: 25 CRNFARGACRWGQNCRFSHD----RKATQICKYFQNGFCGYGDRCSYQHIL 71
>gi|426199556|gb|EKV49481.1| hypothetical protein AGABI2DRAFT_218879 [Agaricus bisporus var.
bisporus H97]
Length = 348
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 31/156 (19%)
Query: 429 RKRSALSKEK----KAKKKQKERKKRAEKNRQLG-VRRLKLPQNLKPKTVKYCHHYLKGR 483
+ RS + KE+ +AK+K E K++ E+ V+ K+P + PKTV C + G
Sbjct: 47 KSRSVIEKEREKELRAKQKADEEKRKKEEAAMFKPVQVQKVPFGVDPKTV-LCAFFKAGN 105
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC-PFDHD------LSKYP------ 530
C++G KCKFSHD K K + D +D + LSK+
Sbjct: 106 CEKGSKCKFSHDMDVGRKVEKKNLYEDNREDKATDTMDQWDEEKLRRVVLSKHGNPRTST 165
Query: 531 ---CENFVAK------GF---CNRGDNCLFSHKLPP 554
C+ F+ G+ C G NC + H LPP
Sbjct: 166 DIVCKFFIEAIETQKFGWFWECPNGSNCQYRHALPP 201
>gi|402087095|gb|EJT81993.1| CCCH zinc finger protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 442
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 470 PKTVKYCHHYL-KGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L G C G C SH+ + T AC H+A+ C D C + H +
Sbjct: 274 PAKVAICRDFLVTGDCVSGGSCDLSHELT--DERTPACVHYAKGKCTNPD-CRYAH-MQV 329
Query: 529 YP----CENFVAKGFCNRGDNC 546
P C +F G+C++G NC
Sbjct: 330 TPGAPVCRDFGMLGYCSKGANC 351
>gi|354482517|ref|XP_003503444.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
[Cricetulus griseus]
Length = 488
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 31/122 (25%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGD--- 518
K+ + PK+V C + +G+C +GDKCKFSHD K K + AR+ ++ D
Sbjct: 155 KISKGADPKSV-VCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMD 213
Query: 519 -----------NCPFDHDLSKYPCENFVAKGFCNR---------------GDNCLFSHKL 552
N K P V + F GDNC++ H L
Sbjct: 214 NWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHAL 273
Query: 553 PP 554
PP
Sbjct: 274 PP 275
>gi|401409159|ref|XP_003884028.1| putative zinc finger (CCCH type) protein [Neospora caninum
Liverpool]
gi|325118445|emb|CBZ53996.1| putative zinc finger (CCCH type) protein [Neospora caninum
Liverpool]
Length = 385
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA--CCHFARNSCMKGDNCPFDH 524
C H+ G C+ G +C FSH L K T+ C F R C G NCP+ H
Sbjct: 49 CRHWQAGNCRNGHRCTFSHGIEDL-KGTRGILCRFFVRGVCKHGANCPYMH 98
>gi|299755658|ref|XP_002912126.1| no arches protein [Coprinopsis cinerea okayama7#130]
gi|298411323|gb|EFI28632.1| no arches protein [Coprinopsis cinerea okayama7#130]
Length = 278
Score = 45.4 bits (106), Expect = 0.12, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 460 RRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGD 518
R+L + + C H+L+G C++GD C+F H+ + C FA+ C GD
Sbjct: 78 RQLPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYN--LRRMPECWWFAKYGYCSAGD 135
Query: 519 NCPFDHDLS-KYPCENFVAKGFCNRGDNCLFSH 550
C + H + C ++ +GFC G C H
Sbjct: 136 ECLYAHPKERRIECPDY-NRGFCKLGPTCPRKH 167
>gi|212545719|ref|XP_002153013.1| CCCH zinc finger protein [Talaromyces marneffei ATCC 18224]
gi|210064533|gb|EEA18628.1| CCCH zinc finger protein [Talaromyces marneffei ATCC 18224]
Length = 442
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 506 CCHFARN-SCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPP 554
C F+R SC KG +CP+ HD +K C++F+ G C GD+C SH+ P
Sbjct: 238 CKRFSRTGSCYKGPDCPYIHDANKVAICKDFLQTGKCRSGDSCDLSHEPSP 288
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 473 VKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP- 530
V C +L+ G+C+ GD C SH+ P + C HF R C + C + H + P
Sbjct: 262 VAICKDFLQTGKCRSGDSCDLSHEPSP--HRSPVCVHFLRGRCSNPE-CRYTH-VRVTPG 317
Query: 531 ---CENFVAKGFCNRGDNCLFSH 550
C +F G+C + C H
Sbjct: 318 APVCRDFAVLGYCEKAGECTDRH 340
>gi|409078548|gb|EKM78911.1| hypothetical protein AGABI1DRAFT_60078 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 348
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 31/156 (19%)
Query: 429 RKRSALSKEK----KAKKKQKERKKRAEKNRQLG-VRRLKLPQNLKPKTVKYCHHYLKGR 483
+ RS + KE+ +AK+K E K++ E+ V+ K+P + PKTV C + G
Sbjct: 47 KSRSVIEKEREKELRAKQKADEEKRKKEEAAMFKPVQVQKVPFGVDPKTV-LCAFFKAGN 105
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNC-PFDHD------LSKYP------ 530
C++G KCKFSHD K K + D +D + LSK+
Sbjct: 106 CEKGSKCKFSHDMDVGRKVEKKNLYEDNREDKATDTMDQWDEEKLRRVVLSKHGNPRTST 165
Query: 531 ---CENFVAK------GF---CNRGDNCLFSHKLPP 554
C+ F+ G+ C G NC + H LPP
Sbjct: 166 DIVCKFFIEAIETQKFGWFWECPNGSNCQYRHALPP 201
>gi|367035264|ref|XP_003666914.1| hypothetical protein MYCTH_2312055 [Myceliophthora thermophila ATCC
42464]
gi|347014187|gb|AEO61669.1| hypothetical protein MYCTH_2312055 [Myceliophthora thermophila ATCC
42464]
Length = 354
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 39/160 (24%)
Query: 433 ALSKEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGRC 484
A K K+A+KK +E++K+A + + L K+P + PKTV C Y KG C
Sbjct: 46 AQQKRKEAEKKAREQEKKAAEAAKRETEALLNKPAQVQKVPFGVDPKTV-VCIFYKKGNC 104
Query: 485 QEGDKCKFSHDTVPLTKSTKACCH---FARNSCMKGDNCPFDHDLSKYP----------- 530
++G KCKF+HD K K + A K D D K
Sbjct: 105 EKGKKCKFAHDLEVERKVEKKNVYQDTRAEEEEKKRQETSADWDEEKLRSVVLSKKGNQR 164
Query: 531 ------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C++ H LPP
Sbjct: 165 TTTDKVCKYFIQAIEDGKYGWFWVCPNGGDKCMYKHALPP 204
>gi|121714124|ref|XP_001274673.1| CCCH finger DNA binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119402826|gb|EAW13247.1| CCCH finger DNA binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 342
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 37/160 (23%)
Query: 431 RSALSKEKKAKKKQKERKKRAEKNRQLGVRRL-------KLPQNLKPKTVKYCHHYLKGR 483
+SA +K+K+A+K ++E +K+A + + L K+P + PKTV C + +G
Sbjct: 40 KSADAKKKEAEKARREAEKKAAELAKKETAELFKPVQVQKVPFGVDPKTV-LCVFFKQGN 98
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSC---MKGDNC-PFDHD------LSKYP--- 530
C++G KCKFSHD K+ K + KGD +D + LSK+
Sbjct: 99 CEKGRKCKFSHDPNVERKAAKKDLYTDSRETEDEKKGDTMDQWDEEKLRTVVLSKHGNPR 158
Query: 531 ------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C++ H LPP
Sbjct: 159 TTTDKVCKYFIEAVENQKYGWFWVCPNGGDKCMYKHSLPP 198
>gi|449473425|ref|XP_002187130.2| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2
[Taeniopygia guttata]
Length = 405
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
++L+G C+EG+KC FSHD + +KS+ C ++ + C G C +DH
Sbjct: 4 YFLQGVCREGNKCLFSHD-LATSKSSTICKYYQKGQCAYGSRCRYDH 49
>gi|34784575|gb|AAH57067.1| Cpsf4 protein [Mus musculus]
Length = 159
Score = 45.4 bits (106), Expect = 0.13, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH--DLSK 528
KTV C H+L+G C++GD+C+F H+ +TK + C +++ CPF H SK
Sbjct: 11 KTV-VCKHWLRGLCKKGDQCEFLHE-YDMTKMPE-CYFYSKFGECSNKECPFLHIDPESK 67
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
+ +GFC G C H
Sbjct: 68 IKDCPWYDRGFCKHGPLCRHRH 89
>gi|392595069|gb|EIW84393.1| hypothetical protein CONPUDRAFT_135854 [Coniophora puteana
RWD-64-598 SS2]
Length = 340
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 431 RSALSKEKKA--KKKQK---ERKKRAEKNRQLGVRRLKLPQNLKPKTVKYCHHYLKGRCQ 485
R+A+ KEK+ ++KQK +++KR E V+ K+P + PKT+ C Y G C
Sbjct: 50 RAAIEKEKEKALREKQKADEDKRKREEAEMFKPVQVQKVPFGVDPKTL-LCAFYKAGNCD 108
Query: 486 EGDKCKFSHD 495
+G+KCKFSHD
Sbjct: 109 KGNKCKFSHD 118
>gi|297303636|ref|XP_002806243.1| PREDICTED: putative E3 ubiquitin-protein ligase makorin-4-like
[Macaca mulatta]
Length = 465
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCENFVA---KGFCNRGDNCLFSHKLPPKEQDPPTP 562
C +F C +GDNC + HDLS PC + +G+C GD C H P K Q+ T
Sbjct: 48 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSCFKRGYCLYGDRCRCEHSKPLK-QEEATA 106
Query: 563 STCTPELKPSPPLYASNLLKPL 584
+ T E + S+++ PL
Sbjct: 107 TELTTESSLAASSSLSSIVGPL 128
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD C F R C+ GD C +H
Sbjct: 48 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSC-FKRGYCLYGDRCRCEH 95
>gi|294933061|ref|XP_002780578.1| mRNA 3'-end-processing protein ytH1, putative [Perkinsus marinus
ATCC 50983]
gi|239890512|gb|EER12373.1| mRNA 3'-end-processing protein ytH1, putative [Perkinsus marinus
ATCC 50983]
Length = 253
Score = 45.4 bits (106), Expect = 0.13, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C H+LK C +GDKC F H C + ++ +C HD+ C+ +
Sbjct: 117 CKHWLKTLCMKGDKCDFLHQYD--VNRMPECVAWVKHGRCTEKDCELRHDIETVECQKY- 173
Query: 536 AKGFCNRGDNCLFSHKLPPKEQDPP-TPS----TCTPELKPSPPLYASNLLK 582
GFC G+ C H+ ++ P P C P + P +LL+
Sbjct: 174 KYGFCRLGNMCRLRHEKHGRQMLPDLVPDWYLRECVPNVFEFVPRMPEDLLR 225
>gi|348586088|ref|XP_003478802.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
[Cavia porcellus]
Length = 426
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 48/122 (39%), Gaps = 31/122 (25%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGD--- 518
K+ + PK+V C + +G+C +GDKCKFSHD K K + AR+ ++ D
Sbjct: 93 KISKGADPKSV-VCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMD 151
Query: 519 -----------NCPFDHDLSKYPCENFVAKGFCNR---------------GDNCLFSHKL 552
N K P V K F GDNC++ H L
Sbjct: 152 NWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDNCMYRHAL 211
Query: 553 PP 554
PP
Sbjct: 212 PP 213
>gi|237838919|ref|XP_002368757.1| hypothetical protein TGME49_066780 [Toxoplasma gondii ME49]
gi|211966421|gb|EEB01617.1| hypothetical protein TGME49_066780 [Toxoplasma gondii ME49]
Length = 891
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 62/161 (38%), Gaps = 47/161 (29%)
Query: 466 QNLKPKTVKYCHHYLK-GRCQEGDKCKFSHDT----VPLTKSTKA--CCH---------- 508
+NL K C Y+K GRC+ D+C++SHD P K CH
Sbjct: 10 ENLYKFRTKICERYVKQGRCEFADRCQYSHDLRWTRRPPWKYNYCPELCHDLQFVKDGRG 69
Query: 509 --FARNSCMKGDNCPFDH---DLSKYP-------CENFVAKGFCNRGDNCLFSHKL---- 552
A++SC + NC F H + +P C+ F +C+R C F+H L
Sbjct: 70 RTIAKSSCKQKRNCKFAHTKEEQVYHPKMYKTIMCKQFQTNAWCDR-YYCPFAHTLSELR 128
Query: 553 ------PPK-------EQDPPTPSTCTPELKPSPPLYASNL 580
PP +QD P P KP P L A L
Sbjct: 129 PADLFYPPSKVVGSCDDQDALCPDIYLPSDKPHPRLRARFL 169
>gi|154322777|ref|XP_001560703.1| hypothetical protein BC1G_00731 [Botryotinia fuckeliana B05.10]
Length = 347
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 472 TVKYCH-HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLSKY 529
T K C+ HYL+G C +GD+C F HD + KA + R N C+ G +C + + +
Sbjct: 242 TNKLCNNHYLRGPCSKGDECCFEHDHKATEEEIKAIAYLTRQNPCVNGQDCDNEECIYGH 301
Query: 530 PCENFVAKGFCNRGDNCL-FSHKLPPKEQDPP 560
C + V + C+ F+ K KE PP
Sbjct: 302 HCPSVVIPSVGPKEPTCMAFACKF-YKEDHPP 332
>gi|328856414|gb|EGG05535.1| hypothetical protein MELLADRAFT_116747 [Melampsora larici-populina
98AG31]
Length = 879
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 499 LTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDN-CLFSHKLP 553
++ K C + + SC++ D C F HDLSK C F +G C +G++ C F H++P
Sbjct: 553 MSNQVKVCKFYLQGSCLRSD-CKFSHDLSKAICR-FWLRGHCLKGESKCDFLHEIP 606
>gi|221481349|gb|EEE19743.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221502071|gb|EEE27817.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 891
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 62/161 (38%), Gaps = 47/161 (29%)
Query: 466 QNLKPKTVKYCHHYLK-GRCQEGDKCKFSHDT----VPLTKSTKA--CCH---------- 508
+NL K C Y+K GRC+ D+C++SHD P K CH
Sbjct: 10 ENLYKFRTKICERYVKQGRCEFADRCQYSHDLRWTRRPPWKYNYCPELCHDLQFVKDGRG 69
Query: 509 --FARNSCMKGDNCPFDH---DLSKYP-------CENFVAKGFCNRGDNCLFSHKL---- 552
A++SC + NC F H + +P C+ F +C+R C F+H L
Sbjct: 70 RTIAKSSCKQKRNCKFAHTKEEQVYHPKMYKTIMCKQFQTNAWCDR-YYCPFAHTLSELR 128
Query: 553 ------PPK-------EQDPPTPSTCTPELKPSPPLYASNL 580
PP +QD P P KP P L A L
Sbjct: 129 PADLFYPPSKVVGSCDDQDALCPDIYLPSDKPHPRLRARFL 169
>gi|453088842|gb|EMF16882.1| hypothetical protein SEPMUDRAFT_146006 [Mycosphaerella populorum
SO2202]
Length = 481
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P + C + G CQ G C SH+ P AC HF R +C K C + H
Sbjct: 309 PSRIAICKEFFATGFCQAGKSCDLSHE--PSYHRVPACIHFLRGNCTK-SACRYAHVNVP 365
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
S C F G+C++G C
Sbjct: 366 ASVLVCRPFATLGYCSKGVKC 386
>gi|378732263|gb|EHY58722.1| hypothetical protein HMPREF1120_06725 [Exophiala dermatitidis
NIH/UT8656]
Length = 606
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 465 PQNLKPKTVKY--CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
P N K K+ C + +G CQ G+ C FSH P+T+ C +F + +C G C
Sbjct: 92 PPNTSNKNTKHVPCKFFRQGACQAGNACPFSHSLDPMTQQAP-CKYFMKGNCKFGAKCAL 150
Query: 523 DHDL 526
H L
Sbjct: 151 AHYL 154
>gi|255558556|ref|XP_002520303.1| protein with unknown function [Ricinus communis]
gi|223540522|gb|EEF42089.1| protein with unknown function [Ricinus communis]
Length = 2030
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C ++L+G C + C + H V + + C F R C G+ C
Sbjct: 1843 KLTHKVIPERMPDCSYFLQGLCSN-ENCPYRH--VHVNPNASTCEGFLRGYCNDGNECQK 1899
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
H Y C + A G C G C H
Sbjct: 1900 KHS---YVCPTYEATGSCPEGSKCKLHH 1924
>gi|426228521|ref|XP_004008352.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Ovis aries]
Length = 434
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 508 HFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
+F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 17 YFLHGVCKEGDNCRYSHDLSDSPYGVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 70
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
++L G C+EGD C++SHD + + C +F R C+ GD C ++H
Sbjct: 17 YFLHGVCKEGDNCRYSHD-LSDSPYGVVCKYFQRGYCIYGDRCRYEH 62
>gi|151942883|gb|EDN61229.1| polyadenylation factor subunit [Saccharomyces cerevisiae YJM789]
Length = 208
Score = 45.4 bits (106), Expect = 0.14, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D+C++ H+ + C F++N C + +C + H +K P C
Sbjct: 67 CRHWLRGLCKKNDQCEYLHEYN--LRKMPECVFFSKNGYCTQSPDCQYLHIDPATKIPKC 124
Query: 532 ENFVAKGFCNRGDNCLFSH 550
EN+ GFC G +C H
Sbjct: 125 ENY-EMGFCPLGSSCPRRH 142
Score = 41.6 bits (96), Expect = 2.1, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFC 540
C G C H +P+ ++ C H+ R C K D C + H+ L K P C F G+C
Sbjct: 46 CPRGPLCPKKH-VLPIFQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYC 104
Query: 541 NRGDNCLFSHKLP 553
+ +C + H P
Sbjct: 105 TQSPDCQYLHIDP 117
>gi|157133950|ref|XP_001663088.1| hypothetical protein AaeL_AAEL003065 [Aedes aegypti]
gi|108881457|gb|EAT45682.1| AAEL003065-PA [Aedes aegypti]
Length = 617
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 LPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
L N+ + + CH +L+GRC + D C + H V ++ + C F + C D C
Sbjct: 406 LSHNVSLEKMPVCHFFLEGRCTKND-CPYLHKKV--SERERICEDFLKGYCPLADKCIKR 462
Query: 524 HDLSKYPCENFVAKGFCNRGDNCLFSH 550
H+ + C V G C+R NC + H
Sbjct: 463 HE---FICPEMVRLGACDR-TNCPYPH 485
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDL---SKY 529
+ C +LKG C D C SH+ V L K C F C K D CP+ H +
Sbjct: 388 IMICSKFLKGECSNSD-CLLSHN-VSLEK-MPVCHFFLEGRCTKND-CPYLHKKVSERER 443
Query: 530 PCENFVAKGFCNRGDNCLFSHKL 552
CE+F+ KG+C D C+ H+
Sbjct: 444 ICEDFL-KGYCPLADKCIKRHEF 465
>gi|449269472|gb|EMC80235.1| E3 ubiquitin-protein ligase makorin-1, partial [Columba livia]
Length = 420
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+++ G C+EGD C++SHD + +S C ++ R C GD C ++H
Sbjct: 2 YFMHGVCKEGDNCRYSHD-LSTGQSAMVCRYYQRGCCAYGDRCRYEH 47
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
Query: 508 HFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPS 563
+F C +GDNC + HDL S C + +G C GD C + H P K+++
Sbjct: 2 YFMHGVCKEGDNCRYSHDLSTGQSAMVC-RYYQRGCCAYGDRCRYEHTKPLKQEE----- 55
Query: 564 TCTPELKPSPPLYAS 578
++ P +YAS
Sbjct: 56 --MTDVNPDEEIYAS 68
>gi|428175385|gb|EKX44275.1| hypothetical protein GUITHDRAFT_46950, partial [Guillardia theta
CCMP2712]
Length = 93
Score = 45.4 bits (106), Expect = 0.15, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 476 CHHYLKGRCQEGDKCKFSHD----TVPLTKSTKACCHFARNSCMKGDNCPFDH---DLSK 528
C H+L+ +C++GD+C++ H +PL C FA C K D+C F H +
Sbjct: 2 CKHWLRSQCKKGDQCEYLHQYDMTRMPL------CHFFADGQCTK-DDCQFLHIRPEDKV 54
Query: 529 YPCENFVAKGFCNRGDNCLFSH 550
C + A+GFC G C H
Sbjct: 55 VECP-WYARGFCKHGPKCRKKH 75
>gi|296818643|ref|XP_002849658.1| CCCH zinc finger protein [Arthroderma otae CBS 113480]
gi|238840111|gb|EEQ29773.1| CCCH zinc finger protein [Arthroderma otae CBS 113480]
Length = 448
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHD--L 526
P V C +L+ G C G C SHD P + + AC HF R C +C + H
Sbjct: 274 PNKVAICKDFLQTGNCDAGLACDLSHDPSP--ERSPACLHFLRGRCTN-PSCRYTHARIT 330
Query: 527 SKYP-CENFVAKGFCNRGDNC 546
P C +F G+C++G C
Sbjct: 331 PGAPVCRDFAILGYCSKGATC 351
>gi|322709801|gb|EFZ01376.1| CCCH finger DNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 387
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 9/68 (13%)
Query: 436 KEKKAKKKQKERKKRAEKNRQLGVRRL--------KLPQNLKPKTVKYCHHYLKGRCQEG 487
K+K+A+K Q+E++K+A ++ + L K+P + PKTV C + KG C++G
Sbjct: 57 KKKQAEKAQREKEKKAAEDAKRETELLLNKPAQIQKVPFGVDPKTV-LCIFFKKGDCEKG 115
Query: 488 DKCKFSHD 495
KCKFSHD
Sbjct: 116 KKCKFSHD 123
>gi|395739051|ref|XP_002818578.2| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Pongo abelii]
Length = 497
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 508 HFARNSCMKGDNCPFDHDLSKYP----CENFVAKGFCNRGDNCLFSHKLPPKEQD 558
+F C +GDNC + HDLS P C+ F +G+C GD C + H P K+++
Sbjct: 78 YFMHGVCKEGDNCRYSHDLSDSPYSVVCKYF-QRGYCIYGDRCRYEHSKPLKQEE 131
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+++ G C+EGD C++SHD S C +F R C+ GD C ++H
Sbjct: 78 YFMHGVCKEGDNCRYSHDLSDSPYSV-VCKYFQRGYCIYGDRCRYEH 123
>gi|242818822|ref|XP_002487193.1| CCCH finger DNA binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713658|gb|EED13082.1| CCCH finger DNA binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 355
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 33/124 (26%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF------------A 510
K+P + PKTV C Y +G C++G KCKFSHD KS K +
Sbjct: 86 KVPFGVDPKTV-VCQFYKQGHCEKGKKCKFSHDLSVERKSAKRDLYSDTRDSDAANGGKE 144
Query: 511 RNSCMKGDNCPF-DHDLSKYP---------CENFVAK------GF---C-NRGDNCLFSH 550
+++ + D D LSK+ C+ F+ G+ C N GD C++ H
Sbjct: 145 KDTMDQWDEAKLRDVVLSKHGNPRTTTDKVCKYFIEAVENQKYGWFWTCPNGGDKCMYRH 204
Query: 551 KLPP 554
LPP
Sbjct: 205 ALPP 208
>gi|328777722|ref|XP_001122982.2| PREDICTED: hypothetical protein LOC727272 [Apis mellifera]
Length = 580
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 464 LPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
L ++ P+ + C ++L+G C D C + H + ++ ST C F + C+KG C
Sbjct: 380 LSHDIGPEKMPTCKYFLEGCCTR-DACPYRH--IKVSSSTPICIDFLQGYCVKGSECKQR 436
Query: 524 HDLSKYPCENFVAKGFCNRGDNCLFSHK 551
H+ C F C++G +C + HK
Sbjct: 437 HE---NLCPEFEKTKKCSKGKHCPYPHK 461
>gi|328870971|gb|EGG19343.1| hypothetical protein DFA_02130 [Dictyostelium fasciculatum]
Length = 597
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 19/88 (21%)
Query: 482 GRCQEGDKCKFSHDTVPLTKST-------------------KACCHFARNSCMKGDNCPF 522
G C G+ C +SHD K + C F C KGD+CPF
Sbjct: 294 GSCSRGNDCPYSHDLYQPIKVEQVEVEEPVFTDDFTTDFVWEPCKFFKAGYCSKGDDCPF 353
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
H+L + PC+ F C C + H
Sbjct: 354 AHNLKEIPCKYFNRPSGCANTTECPYGH 381
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 46/123 (37%)
Query: 476 CHHYLKGRCQEGDKCKFSH----------------DTVPLTKSTKACCHF--ARNSCMKG 517
C + G C +GD C ++H D K + C + SC +G
Sbjct: 186 CRFFKTGTCSKGDDCPYTHIEEQPVPVPPPKVKDIDKKRKEKEKETCKFYNGKAGSCSRG 245
Query: 518 DNCPFDHDLSKY---------------------------PCENFVAK-GFCNRGDNCLFS 549
++CP+ HDL K PC+ + K G C+RG++C +S
Sbjct: 246 NDCPYSHDLYKPVVVQPAVVVPPPKVNDTNKKRKEKENEPCKFYNGKAGSCSRGNDCPYS 305
Query: 550 HKL 552
H L
Sbjct: 306 HDL 308
>gi|407929377|gb|EKG22207.1| SNARE associated Golgi protein [Macrophomina phaseolina MS6]
Length = 289
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARN-SCMKGDNCPFDH---DLSKYPC 531
C H+L+G C++G+ C+F H+ + C H++R+ +C GD+C + H + + PC
Sbjct: 100 CKHWLRGLCKKGEACEFLHEYN--LRRMPECNHYSRHLTCSNGDDCLYLHIDPESKRPPC 157
Query: 532 ENFVAKGFCNRGDNCLFSH 550
++ +GFC G C H
Sbjct: 158 PHY-DRGFCPLGPRCAKKH 175
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLT----KSTKACCHFARNSCMKGDNCPFDHD--LSKY 529
C+ + +G C G+ C H T + C H+ R C KG+ C F H+ L +
Sbjct: 66 CNAFKQGHCPLGNACPDKHPTSSAFNNSFHGSLVCKHWLRGLCKKGEACEFLHEYNLRRM 125
Query: 530 P-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
P C ++ C+ GD+CL+ H + P+ + PP P
Sbjct: 126 PECNHYSRHLTCSNGDDCLYLH-IDPESKRPPCP 158
>gi|403213908|emb|CCK68410.1| hypothetical protein KNAG_0A07570 [Kazachstania naganishii CBS
8797]
Length = 215
Score = 45.1 bits (105), Expect = 0.16, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYPCE 532
C H+L+G C++ D+C++ H+ + C +FA+N C + +C + H S+ P
Sbjct: 67 CKHWLRGLCKKNDQCEYLHEYN--LRRMPECVYFAKNGYCTQSPDCQYLHVDPQSRIPRC 124
Query: 533 NFVAKGFCNRGDNCLFSH 550
+ GFC+ G C H
Sbjct: 125 EYYDLGFCSEGAQCKNRH 142
>gi|393240356|gb|EJD47882.1| hypothetical protein AURDEDRAFT_144223 [Auricularia delicata
TFB-10046 SS5]
Length = 905
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 31/123 (25%)
Query: 476 CHHYLKGRCQEGDKCKFSHD----TVPLTKSTKA---------CCHFARNSCMKGDNCPF 522
C Y + +C G +C + HD TVP K+ C ++ +C KG NC F
Sbjct: 6 CRFYQENKCMNGSRCPYRHDRDTRTVPSCVPGKSRPSRGSKTPCVFWSAGTCTKGKNCEF 65
Query: 523 DHDL----------SKYPCENFVAKGFCNRGDNCLFSH--------KLPPKEQDPPTPST 564
H + P + +G C G C F H PP+ +P P+
Sbjct: 66 SHATPQSTSSGPPHASQPLCTYFLQGRCAAGQGCKFLHDPAGLMPTSKPPRSSEPSFPAP 125
Query: 565 CTP 567
+P
Sbjct: 126 VSP 128
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 43/110 (39%), Gaps = 21/110 (19%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS--CMKGDNCPFDHDLSKYPCEN 533
C ++L+GRC G CKF HD L ++K R+S P H PC
Sbjct: 85 CTYFLQGRCAAGQGCKFLHDPAGLMPTSKP----PRSSEPSFPAPVSPTGH----VPCRY 136
Query: 534 FVAKGFCNRGDNCLFSHKLPPKE----QDPPTPSTC-----TPELKPSPP 574
F A G C C F H PP Q PP P+ P P PP
Sbjct: 137 FAA-GRCTT-VQCPFLHAAPPPAAVVIQRPPDPAPVQVPADPPSWAPVPP 184
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 19/70 (27%)
Query: 502 STKACCHFARNSCMKGDNCPFDHDL------------------SKYPCENFVAKGFCNRG 543
S C + N CM G CP+ HD SK PC F + G C +G
Sbjct: 2 SRPLCRFYQENKCMNGSRCPYRHDRDTRTVPSCVPGKSRPSRGSKTPCV-FWSAGTCTKG 60
Query: 544 DNCLFSHKLP 553
NC FSH P
Sbjct: 61 KNCEFSHATP 70
>gi|326495386|dbj|BAJ85789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 849
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 500 TKSTKACCHFARNSCMKGDNCPFDHDLSKYP---CENFVAKGFCNRGDNCLFSH 550
T ++ C F R SC +G+ CPF H S+ P C+ F+ C G +C FSH
Sbjct: 563 TVESEMCVFFVRGSCTRGNTCPFSHS-SRAPKPVCKFFLTLQGCRNGSSCSFSH 615
>gi|448512977|ref|XP_003866853.1| Yth1 mRNA cleavage and polyadenylation specificity factor [Candida
orthopsilosis Co 90-125]
gi|380351191|emb|CCG21414.1| Yth1 mRNA cleavage and polyadenylation specificity factor [Candida
orthopsilosis Co 90-125]
Length = 216
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++GD C+F H+ + C +++N C +G C + H SK P C
Sbjct: 71 CKHWLRGLCKKGDHCEFLHEYN--LRKMPECLFYSKNGFCTQGSECLYQHIDPQSKIPEC 128
Query: 532 ENFVAKGFCNRGDNC 546
N+ A GFC G NC
Sbjct: 129 MNYNA-GFCAEGPNC 142
>gi|226479970|emb|CAX73281.1| Translation machinery-associated protein 46 [Schistosoma japonicum]
Length = 393
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 62/155 (40%), Gaps = 35/155 (22%)
Query: 431 RSALSKEKKAKKKQKERKKRAEKNRQLG--VRRLKLPQNLKPKTVKYCHHYLKGRCQEGD 488
+SA E++ + K +RK++ E N + K + + PK+V C + +G C +GD
Sbjct: 52 KSAKELEREKQMKDDKRKEKVELNDLFKPVLELQKCAKGVDPKSV-LCVFFKQGLCVKGD 110
Query: 489 KCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKY------------------- 529
KCKFSHD LT KA + K D D D++K
Sbjct: 111 KCKFSHD---LTVERKAEKRGIYSESDKADGTMDDWDINKLEEVISKKHDADNKGLPPST 167
Query: 530 --------PCENFVAKGF--CNRGDNCLFSHKLPP 554
ENF F C G C + H LPP
Sbjct: 168 IVCKYFIDAVENFKYGWFWECPNGKTCHYRHALPP 202
>gi|358381473|gb|EHK19148.1| hypothetical protein TRIVIDRAFT_181899 [Trichoderma virens Gv29-8]
Length = 263
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTK---------ACCHFARNSCMKGDNCPFDHD- 525
C + G C G +C H + +K + C H+ R C KG++C F H+
Sbjct: 44 CKAFQAGSCPNGTRCAERHVSDGRSKDQQQPSGGLNSLVCKHWLRGLCKKGEHCEFLHEY 103
Query: 526 -LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTP 562
L K P C F+ G+C+ G+ CL+ H + P + PP P
Sbjct: 104 NLRKMPECNFFMRNGYCSNGEECLYLH-VDPLSKLPPCP 141
>gi|358388993|gb|EHK26586.1| hypothetical protein TRIVIDRAFT_118387, partial [Trichoderma virens
Gv29-8]
Length = 349
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 36/165 (21%)
Query: 423 SGACNKRKRSALSKEKKAKKKQKERKKR---AEKNRQLGVRRLKLPQNLKPKTVKYCHHY 479
SG+ +RK++A +++ +KK E KR A N+ ++ K+P + PKTV C Y
Sbjct: 49 SGSAEERKKAAEKAQREKEKKAAEDAKRETAALLNKPAQIQ--KVPFGVDPKTV-VCIFY 105
Query: 480 LKGRCQEGDKCKFSHDTVPLTKSTKACCH------------------FARNSCM------ 515
KG C++G KCKF+HD K+ K + + M
Sbjct: 106 KKGDCEKGKKCKFAHDLSVERKTEKKNLYTDGRQEEEEKKKQETSADWTEEQLMKVVLSK 165
Query: 516 KGDNCPFDHDLSKYPCE-----NFVAKGFC-NRGDNCLFSHKLPP 554
KG+ + K+ + + C N GD C++ H LPP
Sbjct: 166 KGNQKTTTDKVCKFFIQAIEDGKYGWFWICPNGGDKCMYKHALPP 210
>gi|242820392|ref|XP_002487501.1| CCCH zinc finger protein [Talaromyces stipitatus ATCC 10500]
gi|218713966|gb|EED13390.1| CCCH zinc finger protein [Talaromyces stipitatus ATCC 10500]
Length = 438
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 506 CCHFARN-SCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPP 554
C F+R SC KG +CP+ HD +K C++F+ G C GD+C SH+ P
Sbjct: 238 CKRFSRTGSCYKGPDCPYIHDANKVSICKDFLQTGKCPSGDSCDLSHEPSP 288
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 473 VKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP- 530
V C +L+ G+C GD C SH+ P + C HF R C + C + H + P
Sbjct: 262 VSICKDFLQTGKCPSGDSCDLSHEPSP--HRSPVCVHFLRGRCSNPE-CRYTH-VRVTPG 317
Query: 531 ---CENFVAKGFCNRGDNCLFSH 550
C F G+C +G C H
Sbjct: 318 APVCRAFAILGYCEKGAECTDRH 340
>gi|387593218|gb|EIJ88242.1| zinc finger protein [Nematocida parisii ERTm3]
gi|387596070|gb|EIJ93692.1| zinc finger protein [Nematocida parisii ERTm1]
Length = 159
Score = 45.1 bits (105), Expect = 0.17, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 28/101 (27%)
Query: 476 CHHYLKGRCQEGDKCKFSH----DTVPL----------------------TKSTKACCHF 509
C H+L+G C++GD C+F H D +P +K C +
Sbjct: 32 CKHWLRGLCKKGDVCEFLHVYALDKMPECWFFSKYGECSNQDCLFLHIDPNSKSKECIWY 91
Query: 510 ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
R C G++C H K C N+ A GFC G C + H
Sbjct: 92 NRGFCRHGNSCRNKH-YKKRMCFNYEA-GFCPLGKGCPYGH 130
>gi|355704724|gb|EHH30649.1| hypothetical protein EGK_20399, partial [Macaca mulatta]
Length = 399
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCENFVA---KGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS PC + +G+C GD C H P K+++
Sbjct: 11 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSCFKRGYCLYGDRCRCEHSKPLKQEE 66
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD C F R C+ GD C +H
Sbjct: 11 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSC-FKRGYCLYGDRCRCEH 58
>gi|302692746|ref|XP_003036052.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
gi|300109748|gb|EFJ01150.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
Length = 287
Score = 45.1 bits (105), Expect = 0.17, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLS-KYPCEN 533
C H+L+G C++GD C+F H+ + C +A+ C GD C + H + C +
Sbjct: 95 CKHWLRGLCKKGDACEFLHEYN--LRRMPECWWYAKYGYCSAGDECLYAHPKERRVECPD 152
Query: 534 FVAKGFCNRGDNCLFSH 550
+ +GFC G +C H
Sbjct: 153 Y-KRGFCKLGPSCPRKH 168
>gi|395331751|gb|EJF64131.1| hypothetical protein DICSQDRAFT_153242 [Dichomitus squalens
LYAD-421 SS1]
Length = 252
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 470 PKTVKYCHHYLKGRC-QEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P + C +L+ +C + C SHD P + T C HFA N NCPF H
Sbjct: 46 PSKIAICWPFLQDKCPNTAETCPLSHDPTP--QRTPLCVHFANNGRCNRPNCPFPHVRVG 103
Query: 526 LSKYPCENFVAKGFCNRGDNC 546
+ C +F G+C +G +C
Sbjct: 104 QREGICRDFAVLGYCEKGLDC 124
>gi|299749274|ref|XP_001838638.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|298408365|gb|EAU83147.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 753
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 429 RKRSALSKEKKAKKKQK---ERKKRAEKNRQL--GVRRLKLPQNLKPKTVKYCHHYLKGR 483
+ R L KEK+ ++K E KRA++ L V+ K+P + PKTV C + G
Sbjct: 468 KSRETLEKEKEKALREKAKAEEAKRAKEQAALLKPVQVQKVPFGVDPKTV-LCAFFKAGT 526
Query: 484 CQEGDKCKFSHD 495
C++G+KCKFSHD
Sbjct: 527 CEKGNKCKFSHD 538
>gi|357629140|gb|EHJ78107.1| hypothetical protein KGM_01823 [Danaus plexippus]
Length = 392
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 31/124 (25%)
Query: 459 VRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKG 517
V+ K+ + + PK+V C + +G+C +GDKCKFSHD K+ K + R+
Sbjct: 83 VQTQKVEKGIDPKSV-VCTFFKQGQCTKGDKCKFSHDLSIERKAEKRSLYVDMRDDEDTM 141
Query: 518 DNCPFDHDLSK-------------YPCENFVAKGF--------------CNRGDNCLFSH 550
DN +D D K P + + K F C G C++ H
Sbjct: 142 DN--WDEDKLKEVVEKKHGEGNKQRPGTDIICKHFLEAVEKSKYGWFWECPSGTKCIYRH 199
Query: 551 KLPP 554
LPP
Sbjct: 200 ALPP 203
>gi|336465226|gb|EGO53466.1| hypothetical protein NEUTE1DRAFT_55260 [Neurospora tetrasperma FGSC
2508]
Length = 432
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 470 PKTVKYCHHYLKGR-CQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---D 525
P V C +L+ C GD C SH+ + T C HF ++SC K D C F H
Sbjct: 268 PAKVAICKDFLQQEECINGDSCDLSHELS--AERTPTCLHFIKDSCTKPD-CKFTHAKVS 324
Query: 526 LSKYPCENFVAKGFCNRGDNCLFSH 550
+ C F G+C +G +C H
Sbjct: 325 PAAPVCREFGLYGYCEKGASCTNRH 349
>gi|355757293|gb|EHH60818.1| hypothetical protein EGM_18690, partial [Macaca fascicularis]
Length = 393
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCENFVA---KGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS PC + +G+C GD C H P K+++
Sbjct: 5 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSCFKRGYCLYGDRCRCEHSKPLKQEE 60
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD C F R C+ GD C +H
Sbjct: 5 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSC-FKRGYCLYGDRCRCEH 52
>gi|402909903|ref|XP_003917642.1| PREDICTED: putative E3 ubiquitin-protein ligase makorin-4-like
[Papio anubis]
Length = 503
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 506 CCHFARNSCMKGDNCPFDHDLSKYPCENFVA---KGFCNRGDNCLFSHKLPPKEQD 558
C +F C +GDNC + HDLS PC + +G+C GD C H P K+++
Sbjct: 86 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSCFQRGYCLYGDRCRCEHSKPLKQEE 141
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +++ G C+EGD C++SHD C F R C+ GD C +H
Sbjct: 86 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSC-FQRGYCLYGDRCRCEH 133
>gi|389583110|dbj|GAB65846.1| hypothetical protein PCYB_073480 [Plasmodium cynomolgi strain B]
Length = 1135
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 27/130 (20%)
Query: 473 VKYCHHYLKGRCQEGDKCKFSH---DTVPLTK--STKACCHFARNSCMKGDNCPFDHDLS 527
+ C Y KG C G KC ++H D P+ K T+ C F S + C F H
Sbjct: 18 TQLCSFYAKGICARGSKCSWAHGELDVRPMPKFYKTRMCYTFLSGSYCEASKCTFAHTEE 77
Query: 528 KYP--------CENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASN 579
+ C + G+C + + C +H + +L PS +S
Sbjct: 78 ELRGSGKALRLCTKYFLDGYCAKANKCPMAHNI--------------NQLDPSVKFSSSE 123
Query: 580 LLKPLNNNKV 589
L+ + NN++
Sbjct: 124 LMNRMYNNEM 133
>gi|356551213|ref|XP_003543972.1| PREDICTED: uncharacterized protein LOC100788859 [Glycine max]
Length = 2033
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPF 522
KL + P+ + C ++L+G C + C + H V + C F + C G+ C
Sbjct: 1827 KLTHKVIPERMPDCSYFLQGLCSNRN-CPYRH--VNVNPKASICEGFLKGYCADGNECRK 1883
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
H Y C F A G C +G C H
Sbjct: 1884 KH---SYVCPTFEATGTCTQGTGCKLHH 1908
>gi|330945434|ref|XP_003306553.1| hypothetical protein PTT_19729 [Pyrenophora teres f. teres 0-1]
gi|311315887|gb|EFQ85351.1| hypothetical protein PTT_19729 [Pyrenophora teres f. teres 0-1]
Length = 725
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS 527
C ++L G C D C+FSHDT S C ++ +C+ GD C F HD S
Sbjct: 283 CKYFLSTGHCARAD-CRFSHDT-----SKTLCKYYLNGNCLAGDTCLFSHDPS 329
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 501 KSTKACCHF-ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
KS C +F + C + D C F HD SK C+ ++ G C GD CLFSH
Sbjct: 278 KSNIVCKYFLSTGHCARAD-CRFSHDTSKTLCKYYL-NGNCLAGDTCLFSH 326
>gi|299745119|ref|XP_001831487.2| hypothetical protein CC1G_09016 [Coprinopsis cinerea okayama7#130]
gi|298406441|gb|EAU90334.2| hypothetical protein CC1G_09016 [Coprinopsis cinerea okayama7#130]
Length = 1424
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 16/65 (24%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKA----------------CCHFARNSCMKGDN 519
C +++ +CQ GDKC F H+ P+T++ C HF + C+ GD
Sbjct: 387 CAFWIRNKCQNGDKCPFRHEGTPITETASGYDSMDNLRGTSPVQDICRHFQKGHCIFGDK 446
Query: 520 CPFDH 524
C H
Sbjct: 447 CQNSH 451
>gi|45383560|ref|NP_989619.1| probable E3 ubiquitin-protein ligase makorin-2 [Gallus gallus]
gi|17017225|gb|AAL33575.1|AF439559_1 makorin-2 [Gallus gallus]
Length = 417
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
C +Y++G C+EG KC FSHD ST C ++ + C G C +DH
Sbjct: 8 CRYYVQGVCREGSKCLFSHDLSSSKSST-VCKYYQKGQCAYGARCRYDH 55
>gi|261203038|ref|XP_002628733.1| CCCH finger DNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239590830|gb|EEQ73411.1| CCCH finger DNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239612550|gb|EEQ89537.1| CCCH finger DNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327358056|gb|EGE86913.1| CCCH finger DNA binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 356
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 45/164 (27%)
Query: 431 RSALSKEKKAKKKQKERKKRAEKNRQLGVRRL-------KLPQNLKPKTVKYCHHYLKGR 483
++A K K+A+++Q+E+ K A + + L K+P + PKTV C + KG
Sbjct: 47 KNADEKRKEAQRQQREKDKAAAEQAKREAAELFKPVQVQKVPFGVDPKTV-LCVFFKKGS 105
Query: 484 CQEGDKCKFSHDTVPLTKSTKACCHF--------ARNSCMKGDNCPFDHD------LSKY 529
C++G +CKFSHD K+ K + + M DN +D + LSK+
Sbjct: 106 CEKGKRCKFSHDPAVERKAQKKDLYSDSRDAEEDKKQDLM--DN--WDEEKLRKVVLSKH 161
Query: 530 P---------CENFVAK---------GFC-NRGDNCLFSHKLPP 554
C+ F+ C N GD C++ H LPP
Sbjct: 162 GNPKTTTEKVCKYFIEAVENQKYGWFWICPNGGDKCMYKHSLPP 205
>gi|189203093|ref|XP_001937882.1| CCCH zinc finger and SMR domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187984981|gb|EDU50469.1| CCCH zinc finger and SMR domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 726
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 476 CHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLS 527
C ++L G C D C+FSHDT S C ++ +C+ GD C F HD S
Sbjct: 283 CKYFLSTGHCARAD-CRFSHDT-----SKTLCKYYLNGNCLAGDTCLFSHDPS 329
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 501 KSTKACCHF-ARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 550
KS C +F + C + D C F HD SK C+ ++ G C GD CLFSH
Sbjct: 278 KSNIVCKYFLSTGHCARAD-CRFSHDTSKTLCKYYL-NGNCLAGDTCLFSH 326
>gi|402085474|gb|EJT80372.1| mRNA 3'-end-processing protein yth-1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 296
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 503 TKACCHFARNSCMKGDNCPFDHD--LSKYP-CENFVAKGFCNRGDNCLFSHKLPPKEQDP 559
+ C H+ R C KGD+C F H+ L K P C ++ GFC G+ C++ H + P+ + P
Sbjct: 93 SMVCKHWLRGLCKKGDSCEFLHEYNLRKMPECNFYLRHGFCQNGEECMYLH-IDPQSKLP 151
Query: 560 PTP 562
P P
Sbjct: 152 PCP 154
>gi|384247479|gb|EIE20966.1| hypothetical protein COCSUDRAFT_83525 [Coccomyxa subellipsoidea
C-169]
Length = 367
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 416 TTKDKLDSGACNKRKRSALSKEKKAKKKQKERKKRAEKNRQLGVRRLKLPQNLKPKTVKY 475
T K +D A KR + +K+KK K + ER + + + +++ K+P + PK+V
Sbjct: 46 TVKKNVDDAA--KRAKGPDAKDKK--KAEAERARELAELFAVAIKQPKVPVGVDPKSV-V 100
Query: 476 CHHYLKGRCQEGDKCKFSHD 495
C ++ G+C +G KCKFSHD
Sbjct: 101 CEYFRHGQCTKGFKCKFSHD 120
>gi|345495262|ref|XP_003427471.1| PREDICTED: hypothetical protein LOC100678538 [Nasonia vitripennis]
Length = 736
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 471 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYP 530
K V C ++L+G+C + C SHD P T C F C + CP+ H K P
Sbjct: 510 KQVAVCKNFLQGKCLLNN-CLLSHDVGPEKMPT---CKFFLQGCCTREGCPYLH--VKVP 563
Query: 531 CENFVA----KGFCNRGDNCLFSH 550
+N + +G+C +G+ C+ H
Sbjct: 564 SKNPICVEFLRGYCPQGNECMNRH 587
>gi|255931263|ref|XP_002557188.1| Pc12g03020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581807|emb|CAP79929.1| Pc12g03020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 443
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 470 PKTVKYCHHYLK-GRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSK 528
P V C +L+ G+C G C SH+ P T C HF R C + C + H +
Sbjct: 268 PSKVAMCKDFLQTGQCAAGSSCDLSHEPSPHRSPT--CMHFLRGRCANPE-CRYAH-VRV 323
Query: 529 YP----CENFVAKGFCNRGDNCLFSH 550
P C F G+C +GD C H
Sbjct: 324 TPGAPVCRAFATLGYCEKGDACEEKH 349
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 513 SCMKGDNCPFDHDLSKYP-CENFVAKGFCNRGDNCLFSHKLPP 554
+C KG CPF HD SK C++F+ G C G +C SH+ P
Sbjct: 255 TCYKGPTCPFVHDPSKVAMCKDFLQTGQCAAGSSCDLSHEPSP 297
>gi|322694916|gb|EFY86734.1| zinc finger protein [Metarhizium acridum CQMa 102]
Length = 538
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 474 KYCH-HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR-NSCMKGDNCPFDHDLSKYPC 531
K C+ H+L+G C +GD C F HD P ++ A AR N C G +C D + + C
Sbjct: 442 KLCNNHFLRGPCTKGDSCFFVHDYKPSSEEINAIAVLARQNPCTNGQDCESDECIYGHHC 501
Query: 532 ENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELK 570
+ R + C+ P++ PP P +K
Sbjct: 502 PSI-------RDNVCIHPFCKFPEDAHPPGTKFKNPSIK 533
>gi|294866516|ref|XP_002764755.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239864445|gb|EEQ97472.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 151
Score = 45.1 bits (105), Expect = 0.20, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFV 535
C H+LK C +GDKC F H C + ++ +C HD+ C+ +
Sbjct: 78 CKHWLKTLCMKGDKCDFLHQYD--VNRMPECVAWVKHGRCTEKDCELRHDIDTVECQKY- 134
Query: 536 AKGFCNRGDNCLFSHK 551
GFC G+ C H+
Sbjct: 135 KYGFCRLGNMCRLRHE 150
>gi|212530402|ref|XP_002145358.1| CCCH finger DNA binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210074756|gb|EEA28843.1| CCCH finger DNA binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 357
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 33/124 (26%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF------------A 510
K+P + PKTV C Y +G C++G KCKFSHD K+ K +
Sbjct: 86 KVPFGVDPKTV-VCQFYKQGHCEKGKKCKFSHDLSVERKAAKRDLYSDSRDAEAAENGKE 144
Query: 511 RNSCMKGDNCPF-DHDLSKYP---------CENFVAK------GF---C-NRGDNCLFSH 550
+++ + D D LSK+ C+ F+ G+ C N GD C++ H
Sbjct: 145 KDTIDQWDEAKLRDVVLSKHGNPKTTTDKVCKYFIEAVENQKYGWFWTCPNGGDKCMYRH 204
Query: 551 KLPP 554
LPP
Sbjct: 205 ALPP 208
>gi|299744839|ref|XP_001831302.2| CCCH zinc finger protein [Coprinopsis cinerea okayama7#130]
gi|298406312|gb|EAU90465.2| CCCH zinc finger protein [Coprinopsis cinerea okayama7#130]
Length = 442
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 441 KKKQKERKKRAEKNRQLGV--------RRLKLPQNLKPKTVKYCHHYLKGRC-QEGDKCK 491
+K +E KKR N+ R L P + C ++L+ C + C+
Sbjct: 200 RKSWRENKKRKYLNKPCPRFTTTGACNRGLTCMYQHDPSKIAICWNFLQDNCPNTAETCQ 259
Query: 492 FSHDTVPLTKSTKACCHFA-RNSCMKGDNCPFDH-DLSKYP--CENFVAKGFCNRGDNC 546
SHD P + T C HF + C +G CPF H ++ K C +F G+C +G +C
Sbjct: 260 LSHDPTP--ERTPLCVHFLNKGRCTRG-GCPFPHVNVGKREGICRDFAVLGYCEKGLDC 315
>gi|332019916|gb|EGI60376.1| Zinc finger CCCH domain-containing protein 15-like protein
[Acromyrmex echinatior]
Length = 399
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 28/123 (22%)
Query: 459 VRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKG 517
V+ K+ + + PK+V C + +G+C +GDKCKFSHD K+ K + R+ +
Sbjct: 85 VQAQKIDKGIDPKSV-VCAFFKQGQCTKGDKCKFSHDLSIERKAEKRSLYCDMRDDDKEE 143
Query: 518 DNC-PFDHDLSK-----------YPCENFVAKGF--------------CNRGDNCLFSHK 551
D +D D K P + + K F C G C++ H
Sbjct: 144 DTMDKWDEDKLKEVVEKKHGSGSRPTTDIICKHFLEAVEKSKYGWFWECPSGQKCIYRHA 203
Query: 552 LPP 554
LPP
Sbjct: 204 LPP 206
>gi|451849950|gb|EMD63253.1| hypothetical protein COCSADRAFT_38119 [Cochliobolus sativus ND90Pr]
Length = 319
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 479 YLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH---DLSKYPCENFV 535
+ K C G++C SH P T C HF C D C F H + + CE F
Sbjct: 155 FYKDACPMGEQCSLSHKASPHNAPT--CLHFQAGRCAN-DGCRFAHIRTNPAALNCEAFG 211
Query: 536 AKGFCNRGDNC--LFSHKLP 553
+ G+C +GD C L +H+ P
Sbjct: 212 SLGYCEKGDKCAELHAHECP 231
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 464 LPQNLKPKTVKYCHHYLKGRCQEGDKCKFSH-DTVPLTKSTKACCHFARNSCMKGDNCPF 522
L P C H+ GRC D C+F+H T P + +A + C KGD C
Sbjct: 168 LSHKASPHNAPTCLHFQAGRC-ANDGCRFAHIRTNPAALNCEA--FGSLGYCEKGDKCA- 223
Query: 523 DHDLSKYPCENFVAKGFCNRGDNCLFSH 550
+L + C +F G C GD C H
Sbjct: 224 --ELHAHECPSFANTGTCRYGDECRLGH 249
>gi|395539534|ref|XP_003771723.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Sarcophilus
harrisii]
Length = 432
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 478 HYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDH 524
+++ G C+EG+ C++SHD + ++S C ++ R C GD C ++H
Sbjct: 13 YFMHGVCKEGNNCRYSHD-LSTSQSAMVCRYYQRGCCAYGDRCRYEH 58
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 508 HFARNSCMKGDNCPFDHDL----SKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPS 563
+F C +G+NC + HDL S C + +G C GD C + H P K ++ +
Sbjct: 13 YFMHGVCKEGNNCRYSHDLSTSQSAMVC-RYYQRGCCAYGDRCRYEHTKPLKREEVTAAN 71
Query: 564 TCTPELKPSPPLYAS--NLLKPL 584
KP PP +S L++PL
Sbjct: 72 LAA---KPDPPASSSLPTLVEPL 91
>gi|395519904|ref|XP_003764081.1| PREDICTED: zinc finger CCCH domain-containing protein 15
[Sarcophilus harrisii]
Length = 426
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 31/122 (25%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGD--- 518
K+ + PK+V C + +G+C +GDKCKFSHD K K + AR+ ++ D
Sbjct: 93 KISKGADPKSV-VCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYIDARDEELEKDTMD 151
Query: 519 -----------NCPFDHDLSKYPCENFVAKGFCNR---------------GDNCLFSHKL 552
N K P V K F + GDNC++ H L
Sbjct: 152 NWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLDAIENNKYGWFWVCPGGGDNCMYRHAL 211
Query: 553 PP 554
PP
Sbjct: 212 PP 213
>gi|344303110|gb|EGW33384.1| hypothetical protein SPAPADRAFT_55266 [Spathaspora passalidarum
NRRL Y-27907]
Length = 216
Score = 44.7 bits (104), Expect = 0.20, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNS-CMKGDNCPFDH--DLSKYP-C 531
C H+L+G C++ D C+F H+ + C F++N C + C + H SK P C
Sbjct: 69 CKHWLRGLCKKSDHCEFLHEYN--LRKMPECLFFSKNGFCTQTPECLYLHIDPSSKIPEC 126
Query: 532 ENFVAKGFCNRGDNCLFSH 550
N+ KGFC G NC H
Sbjct: 127 LNY-NKGFCPDGPNCKNRH 144
>gi|449447537|ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 707
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 476 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFAR--NSCMKGDNCPFDHDLSKYPCEN 533
C H+L+ C +GD C F H KS C F R C + D C + H N
Sbjct: 80 CRHWLRSLCMKGDACGFLHQ---YDKSRMPICRFFRLYGECREQD-CVYKHTNEDIKECN 135
Query: 534 FVAKGFCNRGDNCLFSH 550
GFC G +C + H
Sbjct: 136 MYKFGFCPNGPDCRYRH 152
>gi|58219528|ref|NP_001010963.1| zinc finger CCCH domain-containing protein 15 [Rattus norvegicus]
gi|81885841|sp|Q6U6G5.1|ZC3HF_RAT RecName: Full=Zinc finger CCCH domain-containing protein 15;
AltName: Full=p48ZnF
gi|38570168|gb|AAR24540.1| brain Zn-finger protein [Rattus norvegicus]
gi|56971990|gb|AAH88438.1| Zinc finger CCCH-type containing 15 [Rattus norvegicus]
gi|149022398|gb|EDL79292.1| rCG27365 [Rattus norvegicus]
Length = 426
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 31/122 (25%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGD--- 518
K+ + PK+V C + +G+C +GDKCKFSHD K K + AR+ ++ D
Sbjct: 93 KISKGADPKSV-VCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMD 151
Query: 519 -----------NCPFDHDLSKYPCENFVAKGFCNR---------------GDNCLFSHKL 552
N K P V + F GDNC++ H L
Sbjct: 152 NWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHAL 211
Query: 553 PP 554
PP
Sbjct: 212 PP 213
>gi|393221620|gb|EJD07105.1| hypothetical protein FOMMEDRAFT_144867 [Fomitiporia mediterranea
MF3/22]
Length = 323
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 32/155 (20%)
Query: 431 RSALSKEKKA--KKKQK-ERKKRAEKNRQL--GVRRLKLPQNLKPKTVKYCHHYLKGRCQ 485
R+ L KEK+ ++KQK E +KRA + L V+ K+P + PKTV C + G C
Sbjct: 28 RATLEKEKEKALREKQKAEEEKRARETAALLKPVQTQKVPFGVDPKTV-LCAFFKAGTCD 86
Query: 486 EGDKCKFSHD-TVPLTKSTKACCHFARNSCMKGDNCPFDHD------LSKY--------- 529
+G+KCKFSHD V K R MK +D + LSK+
Sbjct: 87 KGNKCKFSHDPNVGRRVEKKNLYEDTREDKMKDTMENWDEEKLRSVVLSKHGNPKTTTDI 146
Query: 530 PCENFVAK------GF---C-NRGDNCLFSHKLPP 554
C+ F+ G+ C N G+ C + H LPP
Sbjct: 147 VCKYFIEAIETQKFGWFWECPNGGEKCQYRHALPP 181
>gi|34368584|ref|NP_081210.2| zinc finger CCCH domain-containing protein 15 [Mus musculus]
gi|172044639|sp|Q3TIV5.2|ZC3HF_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 15;
AltName: Full=DRG family-regulatory protein 1; AltName:
Full=Epo-immediate response gene protein FM22
gi|21619352|gb|AAH31845.1| Zinc finger CCCH-type containing 15 [Mus musculus]
gi|37194673|gb|AAH58229.1| Zinc finger CCCH-type containing 15 [Mus musculus]
gi|148695327|gb|EDL27274.1| RIKEN cDNA 2610312B22 [Mus musculus]
Length = 426
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 31/122 (25%)
Query: 463 KLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHF-ARNSCMKGD--- 518
K+ + PK+V C + +G+C +GDKCKFSHD K K + AR+ ++ D
Sbjct: 93 KISKGADPKSV-VCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMD 151
Query: 519 -----------NCPFDHDLSKYPCENFVAKGFCNR---------------GDNCLFSHKL 552
N K P V + F GDNC++ H L
Sbjct: 152 NWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHAL 211
Query: 553 PP 554
PP
Sbjct: 212 PP 213
>gi|383852894|ref|XP_003701960.1| PREDICTED: uncharacterized protein LOC100882111 isoform 1
[Megachile rotundata]
Length = 588
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 464 LPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFD 523
L ++ P+ + C ++L+G C D C + H V ++ +T C F + C KG +C
Sbjct: 386 LSHDVGPEKMPTCKYFLEGCCTR-DACPYRH--VKVSSNTPICIEFLQGYCAKGSDCKQR 442
Query: 524 HDLSKYPCENFVAKGFCNRGDNCLFSHK 551
H+ C F C++G +C + HK
Sbjct: 443 HE---NLCPEFEKTNKCSKGKHCPYPHK 467
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.126 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,380,717,558
Number of Sequences: 23463169
Number of extensions: 583046183
Number of successful extensions: 2269727
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 6090
Number of HSP's that attempted gapping in prelim test: 2215137
Number of HSP's gapped (non-prelim): 42889
length of query: 879
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 727
effective length of database: 8,792,793,679
effective search space: 6392361004633
effective search space used: 6392361004633
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 82 (36.2 bits)