Query 002809
Match_columns 878
No_of_seqs 714 out of 4279
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 02:29:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002809.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002809hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 2.4E-50 8.3E-55 444.9 23.7 255 569-842 44-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 7.5E-51 2.6E-55 443.0 19.2 255 569-842 16-289 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 5.5E-51 1.9E-55 445.9 17.4 254 567-839 27-303 (308)
4 3omv_A RAF proto-oncogene seri 100.0 2.9E-49 1E-53 430.9 22.6 255 569-840 39-298 (307)
5 3hmm_A TGF-beta receptor type- 100.0 2.7E-48 9.1E-53 424.8 16.6 268 569-845 6-300 (303)
6 4ase_A Vascular endothelial gr 100.0 2.9E-48 9.8E-53 431.9 15.9 259 568-844 66-349 (353)
7 4b9d_A Serine/threonine-protei 100.0 2.2E-47 7.4E-52 422.2 18.0 248 568-836 26-277 (350)
8 3fpq_A Serine/threonine-protei 100.0 1.3E-46 4.4E-51 407.1 21.6 245 569-835 29-282 (290)
9 4fih_A Serine/threonine-protei 100.0 8.9E-47 3E-51 416.7 20.1 245 569-835 77-323 (346)
10 4aw0_A HPDK1, 3-phosphoinositi 100.0 4E-47 1.4E-51 413.4 16.1 246 568-835 34-284 (311)
11 4g3f_A NF-kappa-beta-inducing 100.0 9.3E-47 3.2E-51 415.3 19.0 253 569-845 61-319 (336)
12 4fie_A Serine/threonine-protei 100.0 9.4E-46 3.2E-50 418.3 21.4 246 568-835 153-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 1.9E-45 6.6E-50 394.5 19.0 242 568-835 15-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 7.5E-46 2.6E-50 403.2 12.0 239 568-830 26-271 (304)
15 4g31_A Eukaryotic translation 100.0 8.2E-44 2.8E-48 387.9 18.0 247 568-835 7-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 2.2E-42 7.6E-47 380.6 23.4 271 570-843 43-316 (321)
17 4b99_A Mitogen-activated prote 100.0 4E-42 1.4E-46 388.8 20.5 260 568-836 56-345 (398)
18 4f9c_A Cell division cycle 7-r 100.0 4.1E-41 1.4E-45 376.3 21.7 196 568-773 23-252 (361)
19 3uim_A Brassinosteroid insensi 100.0 9.8E-42 3.3E-46 376.0 16.3 284 555-839 17-308 (326)
20 2nru_A Interleukin-1 receptor- 100.0 4.6E-40 1.6E-44 359.3 25.4 281 555-842 12-306 (307)
21 3uto_A Twitchin; kinase, muscl 100.0 1.3E-40 4.6E-45 394.0 22.1 248 568-835 159-410 (573)
22 3p86_A Serine/threonine-protei 100.0 7.5E-40 2.6E-44 359.1 22.5 258 568-845 39-301 (309)
23 2psq_A Fibroblast growth facto 100.0 6.7E-40 2.3E-44 368.7 21.5 257 569-844 84-366 (370)
24 3v5w_A G-protein coupled recep 100.0 2.7E-40 9.3E-45 389.9 18.6 246 568-836 191-450 (689)
25 3s95_A LIMK-1, LIM domain kina 100.0 7.7E-40 2.6E-44 358.4 19.3 256 569-845 13-285 (310)
26 3soc_A Activin receptor type-2 100.0 3.2E-40 1.1E-44 363.9 14.4 266 569-843 27-319 (322)
27 3kul_A Ephrin type-A receptor 100.0 2.1E-39 7.1E-44 358.1 19.5 256 568-843 51-314 (325)
28 3ugc_A Tyrosine-protein kinase 100.0 6.2E-40 2.1E-44 356.3 13.6 262 568-842 12-291 (295)
29 3vhe_A Vascular endothelial gr 100.0 1.5E-39 5E-44 363.3 16.9 259 568-844 24-357 (359)
30 3tt0_A Basic fibroblast growth 100.0 4.3E-39 1.5E-43 363.7 20.8 262 568-848 71-358 (382)
31 3cbl_A C-FES, proto-oncogene t 100.0 9.4E-40 3.2E-44 368.4 15.1 255 569-843 117-375 (377)
32 2qol_A Ephrin receptor; recept 100.0 2.3E-39 7.8E-44 364.8 17.0 255 569-843 48-310 (373)
33 2c30_A Serine/threonine-protei 100.0 2.7E-38 9.2E-43 348.6 24.9 263 552-836 19-295 (321)
34 1k9a_A Carboxyl-terminal SRC k 100.0 5.5E-39 1.9E-43 370.7 20.0 250 569-844 196-447 (450)
35 3fxz_A Serine/threonine-protei 100.0 1E-38 3.5E-43 347.9 20.9 246 569-836 23-270 (297)
36 4hcu_A Tyrosine-protein kinase 100.0 4.1E-39 1.4E-43 345.1 16.9 253 569-843 13-267 (269)
37 1luf_A Muscle-specific tyrosin 100.0 1.3E-38 4.5E-43 353.1 20.7 255 569-842 50-335 (343)
38 3l9p_A Anaplastic lymphoma kin 100.0 3.5E-39 1.2E-43 362.4 16.2 260 568-846 73-349 (367)
39 3gen_A Tyrosine-protein kinase 100.0 8E-39 2.7E-43 345.2 18.2 254 569-844 27-282 (283)
40 1t46_A HOMO sapiens V-KIT hard 100.0 6.3E-39 2.2E-43 350.8 17.6 258 568-843 25-308 (313)
41 3lb7_A RAF proto-oncogene seri 100.0 4.1E-38 1.4E-42 344.9 23.7 257 568-841 38-299 (307)
42 3poz_A Epidermal growth factor 100.0 5.4E-39 1.9E-43 354.9 16.8 254 569-843 18-279 (327)
43 1rjb_A FL cytokine receptor; k 100.0 6.1E-39 2.1E-43 356.4 17.1 258 568-843 47-335 (344)
44 2ivs_A Proto-oncogene tyrosine 100.0 8.2E-39 2.8E-43 350.0 17.9 257 568-843 25-312 (314)
45 3fe3_A MAP/microtubule affinit 100.0 2.2E-38 7.5E-43 350.5 21.2 244 568-836 17-265 (328)
46 3dtc_A Mitogen-activated prote 100.0 8.2E-39 2.8E-43 342.7 17.3 250 569-840 10-271 (271)
47 3kmu_A ILK, integrin-linked ki 100.0 1E-38 3.4E-43 341.2 17.5 248 569-841 13-269 (271)
48 3sxs_A Cytoplasmic tyrosine-pr 100.0 1E-38 3.4E-43 341.6 17.2 253 568-842 10-264 (268)
49 4eqm_A Protein kinase; transfe 100.0 1E-38 3.6E-43 347.2 17.1 257 568-842 13-275 (294)
50 1opk_A P150, C-ABL, proto-onco 100.0 6.2E-39 2.1E-43 374.7 16.0 253 568-841 222-477 (495)
51 1qcf_A Haematopoetic cell kina 100.0 4.5E-39 1.5E-43 371.9 14.6 251 569-841 191-443 (454)
52 1csn_A Casein kinase-1; phosph 100.0 5.1E-38 1.8E-42 341.1 21.9 263 568-846 12-287 (298)
53 3q4u_A Activin receptor type-1 100.0 3.2E-38 1.1E-42 343.2 20.1 258 568-840 10-300 (301)
54 3qup_A Tyrosine-protein kinase 100.0 1.2E-38 4.1E-43 350.8 16.9 262 568-848 25-304 (323)
55 3zgw_A Maternal embryonic leuc 100.0 1.9E-38 6.6E-43 353.5 18.3 246 568-836 12-261 (347)
56 1mp8_A Focal adhesion kinase 1 100.0 1.7E-38 5.7E-43 342.8 17.3 257 568-846 17-280 (281)
57 3kfa_A Tyrosine-protein kinase 100.0 8.7E-39 3E-43 345.6 14.9 258 568-846 15-275 (288)
58 2i1m_A Macrophage colony-stimu 100.0 1.3E-38 4.3E-43 352.2 15.7 260 568-845 48-329 (333)
59 2izr_A Casein kinase I isoform 100.0 5.8E-38 2E-42 346.9 20.9 270 569-855 12-294 (330)
60 1u59_A Tyrosine-protein kinase 100.0 7.3E-38 2.5E-42 338.8 20.8 261 572-853 16-283 (287)
61 4euu_A Serine/threonine-protei 100.0 1.8E-37 6.1E-42 341.2 24.2 268 568-843 11-310 (319)
62 4fvq_A Tyrosine-protein kinase 100.0 4.7E-38 1.6E-42 340.0 19.0 253 568-848 10-281 (289)
63 2pvf_A Fibroblast growth facto 100.0 4.5E-38 1.5E-42 348.3 19.3 258 568-844 37-320 (334)
64 3tki_A Serine/threonine-protei 100.0 1.8E-38 6.2E-43 350.3 16.0 249 569-836 10-262 (323)
65 1qpc_A LCK kinase; alpha beta 100.0 6.5E-38 2.2E-42 337.4 19.5 254 568-843 15-270 (279)
66 1p4o_A Insulin-like growth fac 100.0 5.4E-38 1.8E-42 345.2 19.0 263 568-849 27-306 (322)
67 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.7E-38 5.8E-43 366.9 15.7 251 569-841 187-439 (452)
68 1o6l_A RAC-beta serine/threoni 100.0 1E-37 3.5E-42 346.3 21.3 244 569-836 8-261 (337)
69 3og7_A AKAP9-BRAF fusion prote 100.0 9.8E-38 3.4E-42 338.3 20.4 257 568-841 26-287 (289)
70 2y0a_A Death-associated protei 100.0 2E-37 6.7E-42 342.4 22.7 249 567-836 12-272 (326)
71 3lxl_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43 352.1 12.6 268 568-848 25-309 (327)
72 3lzb_A Epidermal growth factor 100.0 4.3E-38 1.5E-42 347.9 17.4 254 569-843 18-279 (327)
73 3kex_A Receptor tyrosine-prote 100.0 1.5E-38 5.1E-43 351.0 13.6 255 569-844 16-278 (325)
74 3t9t_A Tyrosine-protein kinase 100.0 4.8E-38 1.6E-42 335.7 17.0 253 569-843 11-265 (267)
75 2xir_A Vascular endothelial gr 100.0 3.4E-38 1.2E-42 345.5 16.1 260 568-845 29-313 (316)
76 3lxp_A Non-receptor tyrosine-p 100.0 3.1E-38 1E-42 347.4 15.7 261 569-845 34-313 (318)
77 2yab_A Death-associated protei 100.0 1.3E-37 4.4E-42 348.7 20.9 247 568-835 14-272 (361)
78 2eva_A TAK1 kinase - TAB1 chim 100.0 5.2E-38 1.8E-42 343.9 16.9 251 569-842 11-263 (307)
79 1byg_A CSK, protein (C-termina 100.0 4.6E-38 1.6E-42 338.6 15.5 250 569-844 24-275 (278)
80 3op5_A Serine/threonine-protei 100.0 6.9E-38 2.3E-42 351.3 17.2 278 568-856 37-343 (364)
81 3cc6_A Protein tyrosine kinase 100.0 8.2E-38 2.8E-42 337.2 17.2 255 569-845 15-276 (281)
82 2zv2_A Calcium/calmodulin-depe 100.0 4.1E-37 1.4E-41 334.7 22.7 245 568-835 15-292 (298)
83 1mqb_A Ephrin type-A receptor 100.0 1.5E-37 5.1E-42 344.3 19.3 256 570-845 48-312 (333)
84 1b6c_B TGF-B superfamily recep 100.0 3E-37 1E-41 342.0 21.7 270 561-845 37-339 (342)
85 3pls_A Macrophage-stimulating 100.0 2E-37 6.8E-42 336.4 19.7 254 570-843 25-288 (298)
86 1tki_A Titin; serine kinase, m 100.0 2.2E-37 7.4E-42 341.4 20.3 248 568-836 7-258 (321)
87 3f66_A Hepatocyte growth facto 100.0 1.8E-37 6E-42 337.3 19.2 256 568-843 27-292 (298)
88 2bdw_A Hypothetical protein K1 100.0 4.1E-37 1.4E-41 345.0 22.7 250 566-836 29-285 (362)
89 3dbq_A Dual specificity protei 100.0 8.1E-38 2.8E-42 347.8 16.4 248 568-836 11-274 (343)
90 3mdy_A Bone morphogenetic prot 100.0 4.3E-37 1.5E-41 339.9 22.0 269 564-844 35-333 (337)
91 3soa_A Calcium/calmodulin-depe 100.0 6.3E-37 2.1E-41 352.3 24.2 250 567-836 12-268 (444)
92 3niz_A Rhodanese family protei 100.0 3.3E-37 1.1E-41 338.2 20.9 257 569-835 24-300 (311)
93 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-37 3.8E-42 348.3 17.2 244 568-835 25-280 (353)
94 4e5w_A Tyrosine-protein kinase 100.0 2.7E-38 9.3E-43 344.2 11.8 260 568-841 23-301 (302)
95 3c0i_A Peripheral plasma membr 100.0 2.8E-37 9.5E-42 344.8 19.8 251 566-835 24-286 (351)
96 1xbb_A Tyrosine-protein kinase 100.0 2.3E-37 7.7E-42 335.6 18.3 258 569-848 19-285 (291)
97 4dc2_A Protein kinase C IOTA t 100.0 3E-37 1E-41 349.5 20.1 246 568-830 54-307 (396)
98 2h8h_A Proto-oncogene tyrosine 100.0 5E-38 1.7E-42 370.5 14.0 251 569-841 270-522 (535)
99 3p1a_A MYT1 kinase, membrane-a 100.0 3.7E-37 1.3E-41 337.8 19.7 247 562-835 53-304 (311)
100 3gni_B Strad alpha; kinase fol 100.0 3E-37 1E-41 349.2 19.6 264 568-836 27-334 (389)
101 3brb_A Proto-oncogene tyrosine 100.0 6.5E-37 2.2E-41 335.4 21.4 257 568-843 36-309 (313)
102 2w1i_A JAK2; chromosomal rearr 100.0 8.7E-38 3E-42 344.9 14.5 263 568-843 43-323 (326)
103 2x4f_A Myosin light chain kina 100.0 5E-37 1.7E-41 345.7 21.0 251 571-841 94-350 (373)
104 4f0f_A Serine/threonine-protei 100.0 2.8E-37 9.4E-42 333.9 17.9 248 568-839 21-286 (287)
105 3a8x_A Protein kinase C IOTA t 100.0 5.8E-37 2E-41 341.5 21.0 245 569-830 12-264 (345)
106 1kob_A Twitchin; kinase, intra 100.0 7.6E-37 2.6E-41 345.7 22.3 249 568-836 53-305 (387)
107 2jii_A Serine/threonine-protei 100.0 3.4E-37 1.2E-41 344.0 19.1 266 568-848 44-342 (352)
108 2zmd_A Dual specificity protei 100.0 1.9E-37 6.3E-42 351.3 17.1 248 568-836 58-321 (390)
109 2ozo_A Tyrosine-protein kinase 100.0 3E-37 1E-41 369.2 19.6 252 573-845 343-601 (613)
110 1fot_A TPK1 delta, CAMP-depend 100.0 6.9E-37 2.4E-41 337.0 20.9 241 569-836 9-259 (318)
111 3kn6_A Ribosomal protein S6 ki 100.0 2E-37 6.8E-42 342.3 16.5 248 572-835 17-270 (325)
112 3ll6_A Cyclin G-associated kin 100.0 2.5E-37 8.7E-42 341.2 17.3 254 568-844 30-310 (337)
113 4hgt_A Casein kinase I isoform 100.0 6.4E-37 2.2E-41 331.8 20.1 264 568-848 11-286 (296)
114 3c1x_A Hepatocyte growth facto 100.0 1.2E-37 4E-42 350.7 14.8 255 569-843 92-356 (373)
115 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1E-36 3.4E-41 341.9 22.3 250 568-844 67-341 (365)
116 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-36 3.7E-41 330.3 21.8 263 569-848 12-286 (296)
117 4fl3_A Tyrosine-protein kinase 100.0 2.2E-37 7.4E-42 371.6 17.8 250 572-843 375-632 (635)
118 2yfx_A Tyrosine-protein kinase 100.0 2E-37 6.9E-42 341.9 16.1 260 567-845 31-307 (327)
119 3g2f_A Bone morphogenetic prot 100.0 3.2E-37 1.1E-41 341.2 17.7 264 569-843 16-319 (336)
120 3f3z_A Calcium/calmodulin-depe 100.0 1E-36 3.6E-41 327.6 20.9 248 567-836 10-262 (277)
121 1ob3_A PFPK5, cell division co 100.0 6.6E-37 2.3E-41 331.6 19.4 257 569-835 5-280 (288)
122 3llt_A Serine/threonine kinase 100.0 5.4E-37 1.9E-41 343.0 19.3 257 568-835 37-355 (360)
123 1xjd_A Protein kinase C, theta 100.0 2.7E-37 9.2E-42 344.0 16.5 243 569-835 20-269 (345)
124 3ork_A Serine/threonine protei 100.0 2.1E-37 7.1E-42 339.5 15.2 255 568-840 14-279 (311)
125 3o0g_A Cell division protein k 100.0 7.6E-37 2.6E-41 331.7 19.5 258 569-835 5-282 (292)
126 3g33_A Cell division protein k 100.0 5.7E-37 1.9E-41 335.3 18.6 261 566-836 9-297 (308)
127 2pmi_A Negative RE, cyclin-dep 100.0 9E-37 3.1E-41 335.6 20.1 259 569-836 8-294 (317)
128 4aw2_A Serine/threonine-protei 100.0 5.5E-37 1.9E-41 351.8 18.7 249 570-836 78-339 (437)
129 3qd2_B Eukaryotic translation 100.0 4.2E-37 1.4E-41 338.7 17.0 247 568-835 8-325 (332)
130 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.1E-37 2.4E-41 341.4 19.0 241 569-836 44-294 (350)
131 3a62_A Ribosomal protein S6 ki 100.0 9.3E-37 3.2E-41 337.2 19.8 245 568-836 19-277 (327)
132 2i0e_A Protein kinase C-beta I 100.0 8.4E-37 2.9E-41 341.1 19.6 245 568-836 22-277 (353)
133 1fvr_A Tyrosine-protein kinase 100.0 4.2E-37 1.4E-41 339.4 16.7 253 569-843 28-301 (327)
134 2wqm_A Serine/threonine-protei 100.0 1.9E-36 6.4E-41 331.3 21.4 263 568-848 34-303 (310)
135 2a19_B Interferon-induced, dou 100.0 4.9E-37 1.7E-41 330.7 16.5 249 563-842 8-274 (284)
136 3bhy_A Death-associated protei 100.0 1.5E-36 5.3E-41 327.1 20.3 255 566-841 5-273 (283)
137 2w4o_A Calcium/calmodulin-depe 100.0 5.9E-37 2E-41 341.9 17.6 246 568-835 55-305 (349)
138 4fr4_A YANK1, serine/threonine 100.0 8.1E-37 2.8E-41 344.7 18.9 246 568-835 17-271 (384)
139 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.5E-37 1.5E-41 341.0 16.5 243 568-836 11-259 (336)
140 3hko_A Calcium/calmodulin-depe 100.0 7.1E-37 2.4E-41 339.7 18.0 255 566-836 26-331 (345)
141 4eut_A Serine/threonine-protei 100.0 1.4E-36 4.7E-41 344.9 20.6 268 568-843 11-310 (396)
142 2yex_A Serine/threonine-protei 100.0 6.5E-37 2.2E-41 328.6 17.0 249 568-835 9-261 (276)
143 2a2a_A Death-associated protei 100.0 2.7E-36 9.1E-41 332.2 22.2 249 567-836 13-273 (321)
144 4agu_A Cyclin-dependent kinase 100.0 1.6E-36 5.6E-41 331.7 20.4 261 569-836 6-285 (311)
145 3kk8_A Calcium/calmodulin depe 100.0 3.4E-36 1.2E-40 324.6 22.1 247 569-836 9-262 (284)
146 3gxj_A TGF-beta receptor type- 100.0 3.5E-39 1.2E-43 350.9 -1.3 262 568-844 5-299 (303)
147 2buj_A Serine/threonine-protei 100.0 4E-37 1.4E-41 337.5 15.0 257 568-841 31-305 (317)
148 3v8s_A RHO-associated protein 100.0 1.8E-37 6.3E-42 353.0 12.6 248 569-836 72-330 (410)
149 2v62_A Serine/threonine-protei 100.0 8E-37 2.7E-41 340.1 17.0 261 568-840 39-326 (345)
150 4ejn_A RAC-alpha serine/threon 100.0 6.2E-37 2.1E-41 353.2 16.0 245 568-836 150-405 (446)
151 3fdn_A Serine/threonine-protei 100.0 2E-36 6.7E-41 326.0 18.8 242 569-836 12-258 (279)
152 2h34_A Serine/threonine-protei 100.0 2.6E-36 8.8E-41 330.6 19.9 256 568-843 36-297 (309)
153 1u5q_A Serine/threonine protei 100.0 3.2E-36 1.1E-40 335.9 21.0 243 568-836 56-306 (348)
154 3uc3_A Serine/threonine-protei 100.0 5.1E-37 1.7E-41 344.1 14.6 249 568-836 22-275 (361)
155 2ac3_A MAP kinase-interacting 100.0 1.6E-36 5.5E-41 332.5 18.1 254 571-835 18-295 (316)
156 2vd5_A DMPK protein; serine/th 100.0 1E-36 3.5E-41 347.0 17.1 248 570-836 65-328 (412)
157 2jam_A Calcium/calmodulin-depe 100.0 4.1E-36 1.4E-40 327.8 21.0 249 566-836 9-262 (304)
158 1u46_A ACK-1, activated CDC42 100.0 5.2E-37 1.8E-41 332.0 13.7 257 568-844 20-286 (291)
159 2eue_A Carbon catabolite derep 100.0 2.2E-36 7.6E-41 324.9 18.3 242 569-836 16-263 (275)
160 3oz6_A Mitogen-activated prote 100.0 8.1E-37 2.8E-41 345.6 15.5 259 568-836 11-329 (388)
161 2qr7_A Ribosomal protein S6 ki 100.0 2E-36 7E-41 336.6 18.4 249 567-836 23-278 (342)
162 3is5_A Calcium-dependent prote 100.0 6.1E-36 2.1E-40 323.6 21.4 248 567-835 23-278 (285)
163 2rku_A Serine/threonine-protei 100.0 4.7E-36 1.6E-40 325.6 20.5 244 569-836 18-266 (294)
164 1t4h_A Serine/threonine-protei 100.0 2.1E-36 7E-41 327.7 17.6 243 569-835 29-282 (290)
165 3lm5_A Serine/threonine-protei 100.0 6.1E-36 2.1E-40 330.4 21.4 256 562-836 24-288 (327)
166 2r5t_A Serine/threonine-protei 100.0 1E-36 3.4E-41 343.0 15.0 246 568-837 40-291 (373)
167 3cok_A Serine/threonine-protei 100.0 2.6E-36 8.8E-41 324.7 17.2 244 569-835 14-262 (278)
168 2w5a_A Serine/threonine-protei 100.0 1.8E-36 6.1E-41 325.9 15.9 249 569-838 9-270 (279)
169 2owb_A Serine/threonine-protei 100.0 5.6E-36 1.9E-40 331.9 19.8 244 569-836 44-292 (335)
170 1nxk_A MAP kinase-activated pr 100.0 2.4E-36 8.4E-41 343.3 17.2 245 572-836 68-322 (400)
171 2wtk_C Serine/threonine-protei 100.0 7E-36 2.4E-40 325.6 19.9 248 568-836 7-264 (305)
172 2clq_A Mitogen-activated prote 100.0 6.4E-36 2.2E-40 324.1 19.4 245 572-835 28-278 (295)
173 4aaa_A Cyclin-dependent kinase 100.0 2.5E-36 8.7E-41 333.8 16.6 261 569-836 28-307 (331)
174 2y94_A 5'-AMP-activated protei 100.0 4.3E-36 1.5E-40 347.8 19.2 244 568-836 18-267 (476)
175 3rp9_A Mitogen-activated prote 100.0 1.2E-35 4E-40 343.6 22.7 190 568-763 55-279 (458)
176 3dls_A PAS domain-containing s 100.0 1.9E-36 6.7E-41 335.8 15.4 239 567-836 25-275 (335)
177 2vgo_A Serine/threonine-protei 100.0 7.7E-36 2.6E-40 322.2 19.7 243 568-836 16-263 (284)
178 3sv0_A Casein kinase I-like; t 100.0 1E-35 3.6E-40 345.2 22.0 263 568-846 9-282 (483)
179 3ttj_A Mitogen-activated prote 100.0 1.1E-35 3.6E-40 344.4 22.0 258 568-836 64-356 (464)
180 1vzo_A Ribosomal protein S6 ki 100.0 1.8E-36 6.2E-41 338.8 14.8 251 568-837 56-323 (355)
181 2acx_A G protein-coupled recep 100.0 3.4E-36 1.1E-40 354.1 17.7 248 569-836 187-445 (576)
182 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.7E-36 9.1E-41 333.6 15.6 258 568-835 36-318 (329)
183 3eqc_A Dual specificity mitoge 100.0 7.4E-36 2.5E-40 333.9 19.1 260 569-836 36-325 (360)
184 3mtl_A Cell division protein k 100.0 1.3E-36 4.4E-41 335.4 12.7 258 569-836 5-282 (324)
185 3a7i_A MST3 kinase, serine/thr 100.0 1.7E-35 5.7E-40 322.7 21.3 245 569-837 25-272 (303)
186 1cm8_A Phosphorylated MAP kina 100.0 9.7E-36 3.3E-40 334.4 20.0 253 568-836 27-308 (367)
187 1x8b_A WEE1HU, WEE1-like prote 100.0 7.8E-36 2.7E-40 321.3 18.4 242 567-836 12-280 (289)
188 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-36 4.3E-41 333.6 12.4 261 569-850 36-310 (319)
189 2vwi_A Serine/threonine-protei 100.0 1.2E-36 4.1E-41 330.9 12.0 253 569-835 18-287 (303)
190 2x7f_A TRAF2 and NCK-interacti 100.0 1.6E-35 5.4E-40 326.2 20.9 246 569-835 27-286 (326)
191 1z57_A Dual specificity protei 100.0 2.1E-35 7.2E-40 325.9 21.7 259 568-836 16-329 (339)
192 3byv_A Rhoptry kinase; malaria 100.0 8.6E-37 3E-41 344.1 10.6 241 569-840 76-366 (377)
193 2j0j_A Focal adhesion kinase 1 100.0 1.2E-35 3.9E-40 357.9 21.1 256 568-845 392-654 (656)
194 2pml_X PFPK7, Ser/Thr protein 100.0 7.7E-36 2.6E-40 331.7 18.0 255 568-835 33-322 (348)
195 2y7j_A Phosphorylase B kinase 100.0 2.1E-35 7.1E-40 331.5 21.7 247 568-835 96-359 (365)
196 1wak_A Serine/threonine-protei 100.0 1.7E-35 5.8E-40 334.5 21.0 260 566-835 37-391 (397)
197 3i6u_A CDS1, serine/threonine- 100.0 5E-36 1.7E-40 342.9 16.7 250 566-836 135-400 (419)
198 3mi9_A Cell division protein k 100.0 9.7E-36 3.3E-40 331.8 18.6 264 568-836 19-312 (351)
199 3kvw_A DYRK2, dual specificity 100.0 1.1E-35 3.7E-40 341.1 19.2 198 568-775 99-306 (429)
200 3lij_A Calcium/calmodulin depe 100.0 2E-35 7E-40 345.0 21.9 253 566-840 37-298 (494)
201 1ua2_A CAK, cell division prot 100.0 1.3E-35 4.5E-40 330.4 19.3 259 568-836 12-292 (346)
202 3n9x_A Phosphotransferase; mal 100.0 8.9E-36 3E-40 342.2 18.3 194 568-767 28-251 (432)
203 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-35 3.9E-40 348.5 19.2 248 570-835 189-448 (543)
204 3cek_A Dual specificity protei 100.0 8E-36 2.7E-40 326.9 16.6 248 568-836 30-293 (313)
205 2h6d_A 5'-AMP-activated protei 100.0 1.4E-35 4.8E-40 318.4 17.9 244 568-836 13-262 (276)
206 3nyv_A Calmodulin-domain prote 100.0 1.4E-35 4.6E-40 345.6 19.0 249 566-836 26-282 (484)
207 3mwu_A Calmodulin-domain prote 100.0 2.6E-35 8.8E-40 343.5 21.3 250 565-836 21-277 (486)
208 1phk_A Phosphorylase kinase; g 100.0 4.4E-35 1.5E-39 318.2 21.7 246 569-835 20-283 (298)
209 2j7t_A Serine/threonine-protei 100.0 8E-36 2.7E-40 324.6 15.9 248 568-835 21-275 (302)
210 3com_A Serine/threonine-protei 100.0 4.2E-35 1.4E-39 321.0 21.3 246 568-835 31-278 (314)
211 3nsz_A CK II alpha, casein kin 100.0 7.7E-35 2.6E-39 321.2 23.3 254 568-836 38-320 (330)
212 3q60_A ROP5B; pseudokinase, tr 100.0 4.8E-36 1.6E-40 337.2 13.8 249 569-835 65-352 (371)
213 3pfq_A PKC-B, PKC-beta, protei 100.0 2.1E-35 7.1E-40 356.7 19.8 244 568-835 343-597 (674)
214 3q5i_A Protein kinase; CDPK, m 100.0 3.6E-35 1.2E-39 343.8 21.0 247 568-836 38-302 (504)
215 2ycf_A Serine/threonine-protei 100.0 2.3E-35 7.8E-40 324.8 18.1 250 565-835 9-274 (322)
216 2r3i_A Cell division protein k 100.0 2.7E-35 9.2E-40 320.0 18.4 259 569-835 6-283 (299)
217 3eb0_A Putative uncharacterize 100.0 2.6E-35 8.9E-40 332.7 18.9 256 568-836 9-322 (383)
218 3qyz_A Mitogen-activated prote 100.0 2.9E-35 9.9E-40 330.0 18.8 259 568-836 29-314 (364)
219 1blx_A Cyclin-dependent kinase 100.0 4.2E-35 1.4E-39 322.6 19.5 258 568-835 13-296 (326)
220 2i6l_A Mitogen-activated prote 100.0 1.4E-35 4.6E-40 324.9 15.2 259 569-836 14-306 (320)
221 2fst_X Mitogen-activated prote 100.0 1.9E-35 6.4E-40 332.1 16.6 252 569-836 32-312 (367)
222 3fme_A Dual specificity mitoge 100.0 7.2E-36 2.5E-40 322.8 12.7 247 569-835 10-266 (290)
223 2xrw_A Mitogen-activated prote 100.0 1.2E-34 4.2E-39 325.9 22.8 258 568-836 27-319 (371)
224 2b9h_A MAP kinase FUS3, mitoge 100.0 5.7E-35 1.9E-39 325.4 19.6 257 569-835 14-305 (353)
225 4e7w_A Glycogen synthase kinas 100.0 3E-35 1E-39 333.6 17.6 257 568-836 42-322 (394)
226 3pg1_A Mitogen-activated prote 100.0 2.8E-35 9.6E-40 329.4 16.8 257 569-836 25-317 (362)
227 3rgf_A Cyclin-dependent kinase 100.0 1.3E-35 4.6E-40 337.7 14.1 259 571-836 26-334 (405)
228 1j1b_A Glycogen synthase kinas 100.0 5.4E-35 1.9E-39 334.4 19.2 256 568-836 56-337 (420)
229 2vx3_A Dual specificity tyrosi 100.0 4.3E-34 1.5E-38 322.6 26.2 200 568-775 56-265 (382)
230 3an0_A Dual specificity mitoge 100.0 1.6E-35 5.4E-40 328.5 13.9 248 569-836 54-311 (340)
231 2eu9_A Dual specificity protei 100.0 1.4E-34 4.7E-39 321.7 21.3 259 567-835 20-333 (355)
232 1q8y_A SR protein kinase; tran 100.0 1.9E-34 6.5E-39 323.4 21.4 259 568-835 21-333 (373)
233 3coi_A Mitogen-activated prote 100.0 1.9E-34 6.6E-39 321.7 21.1 251 569-836 27-306 (353)
234 1zy4_A Serine/threonine-protei 100.0 7.1E-35 2.4E-39 316.4 16.6 249 568-836 8-284 (303)
235 4exu_A Mitogen-activated prote 100.0 1.5E-34 5.1E-39 325.1 19.9 251 569-836 45-324 (371)
236 2wei_A Calmodulin-domain prote 100.0 2E-34 6.9E-39 311.7 20.0 251 564-836 20-277 (287)
237 3e3p_A Protein kinase, putativ 100.0 2.9E-34 9.8E-39 320.6 19.8 258 569-836 26-315 (360)
238 3fhr_A MAP kinase-activated pr 100.0 1.6E-34 5.3E-39 320.6 15.8 245 571-836 34-288 (336)
239 2iwi_A Serine/threonine-protei 100.0 1.2E-34 4.2E-39 317.1 14.3 241 564-836 29-284 (312)
240 3aln_A Dual specificity mitoge 100.0 2.3E-34 7.9E-39 317.3 16.5 251 569-836 25-286 (327)
241 2rio_A Serine/threonine-protei 100.0 4.2E-34 1.4E-38 328.4 18.0 246 571-835 20-295 (434)
242 3a99_A Proto-oncogene serine/t 100.0 1.1E-34 3.8E-39 319.4 11.3 237 568-836 45-294 (320)
243 2dyl_A Dual specificity mitoge 100.0 2.7E-33 9.2E-38 306.8 19.2 247 569-836 28-284 (318)
244 3p23_A Serine/threonine-protei 100.0 9.3E-34 3.2E-38 325.1 16.0 245 569-835 27-283 (432)
245 3qa8_A MGC80376 protein; kinas 100.0 2E-33 7E-38 333.8 16.0 266 567-843 15-310 (676)
246 2pzi_A Probable serine/threoni 100.0 4.9E-33 1.7E-37 337.4 18.6 240 567-844 81-330 (681)
247 3dzo_A Rhoptry kinase domain; 100.0 1E-32 3.6E-37 314.7 16.8 235 570-835 82-363 (413)
248 3m2w_A MAP kinase-activated pr 100.0 2.4E-32 8.2E-37 297.5 18.8 222 572-836 24-257 (299)
249 3uqc_A Probable conserved tran 100.0 2.2E-32 7.4E-37 296.5 18.1 227 568-843 33-266 (286)
250 2vuw_A Serine/threonine-protei 100.0 9.6E-33 3.3E-37 305.8 15.0 241 566-834 20-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 7.4E-27 2.5E-31 276.3 5.7 182 573-765 241-435 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 9.9E-25 3.4E-29 256.7 11.4 184 571-769 341-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.8 1E-20 3.5E-25 204.1 9.6 141 570-742 94-253 (282)
254 1zth_A RIO1 serine protein kin 99.7 2.9E-17 9.8E-22 174.8 11.9 133 570-716 51-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.5 1.4E-14 4.8E-19 161.1 8.3 136 569-715 98-264 (397)
256 1ogq_A PGIP-2, polygalacturona 99.4 9.1E-14 3.1E-18 151.9 8.8 124 361-488 3-135 (313)
257 3rgz_A Protein brassinosteroid 99.3 3.8E-13 1.3E-17 165.0 5.8 96 406-501 631-750 (768)
258 4ecn_A Leucine-rich repeat pro 99.3 1.2E-12 4.1E-17 161.2 7.5 121 359-489 264-502 (876)
259 4eco_A Uncharacterized protein 99.3 1.3E-12 4.6E-17 156.7 7.6 120 360-489 26-260 (636)
260 3oja_A Leucine-rich immune mol 99.2 1.6E-12 5.3E-17 151.1 2.4 138 328-482 122-266 (487)
261 2jwp_A Malectin, MGC80075; sug 99.1 1.5E-10 5E-15 115.1 11.2 143 28-177 8-171 (174)
262 2v70_A SLIT-2, SLIT homolog 2 99.1 2.2E-11 7.5E-16 125.9 5.4 150 330-495 15-168 (220)
263 3g39_A Variable lymphocyte rec 99.1 6.9E-11 2.4E-15 117.0 8.5 101 393-495 10-117 (170)
264 3rgz_A Protein brassinosteroid 99.1 2.4E-11 8.4E-16 149.0 5.9 115 360-484 8-157 (768)
265 3e6j_A Variable lymphocyte rec 99.1 6.7E-11 2.3E-15 123.0 5.9 149 331-495 24-174 (229)
266 4fcg_A Uncharacterized protein 99.1 7.9E-11 2.7E-15 129.4 5.9 80 406-486 205-285 (328)
267 3tm0_A Aminoglycoside 3'-phosp 99.1 1.8E-10 6.2E-15 121.9 8.4 138 570-714 18-212 (263)
268 4fcg_A Uncharacterized protein 99.1 9.7E-11 3.3E-15 128.7 6.0 127 345-486 182-309 (328)
269 1ogq_A PGIP-2, polygalacturona 99.0 1.9E-11 6.5E-16 133.4 0.2 89 404-496 218-307 (313)
270 3m19_A Variable lymphocyte rec 99.0 2.1E-10 7.1E-15 120.8 7.0 152 329-495 38-194 (251)
271 2v9t_B SLIT homolog 2 protein 99.0 1.1E-10 3.6E-15 120.8 4.2 90 404-495 77-167 (220)
272 3e6j_A Variable lymphocyte rec 99.0 3.9E-10 1.3E-14 117.2 8.2 101 383-488 15-122 (229)
273 2r9u_A Variable lymphocyte rec 99.0 5.3E-10 1.8E-14 111.1 8.7 100 394-495 14-120 (174)
274 1w8a_A SLIT protein; signaling 99.0 2.5E-10 8.6E-15 115.2 6.5 89 405-495 52-141 (192)
275 2wfh_A SLIT homolog 2 protein 99.0 3E-10 1E-14 114.8 6.9 88 406-495 53-141 (193)
276 2ifg_A High affinity nerve gro 99.0 4.9E-10 1.7E-14 123.7 8.2 100 393-495 9-118 (347)
277 3rfs_A Internalin B, repeat mo 99.0 5.7E-10 1.9E-14 119.0 7.5 150 330-495 67-220 (272)
278 2jwp_A Malectin, MGC80075; sug 99.0 1.2E-09 4.2E-14 108.4 8.9 145 192-352 6-170 (174)
279 1p9a_G Platelet glycoprotein I 99.0 4.1E-10 1.4E-14 121.5 5.8 133 346-495 77-210 (290)
280 3m19_A Variable lymphocyte rec 98.9 4E-10 1.4E-14 118.7 5.5 147 329-488 17-165 (251)
281 2o6s_A Variable lymphocyte rec 98.9 9.4E-10 3.2E-14 112.2 7.2 89 405-495 74-163 (208)
282 2wfh_A SLIT homolog 2 protein 98.9 1.5E-09 5.2E-14 109.7 8.5 95 393-488 11-112 (193)
283 2o6r_A Variable lymphocyte rec 98.9 1.6E-09 5.6E-14 107.4 7.8 96 393-488 8-110 (177)
284 1w8a_A SLIT protein; signaling 98.9 1.1E-09 3.8E-14 110.5 6.5 96 393-488 9-112 (192)
285 1nd4_A Aminoglycoside 3'-phosp 98.9 2.7E-09 9.2E-14 112.1 9.8 127 575-714 29-213 (264)
286 3zyi_A Leucine-rich repeat-con 98.9 6.8E-10 2.3E-14 127.4 5.0 152 328-496 149-306 (452)
287 2o6q_A Variable lymphocyte rec 98.9 1.9E-09 6.5E-14 114.7 7.4 91 404-496 130-221 (270)
288 3dxp_A Putative acyl-COA dehyd 98.9 6.4E-09 2.2E-13 115.5 11.9 140 572-715 44-248 (359)
289 1ozn_A Reticulon 4 receptor; N 98.9 1.2E-09 4.3E-14 117.0 5.8 152 329-495 83-240 (285)
290 2je0_A Acidic leucine-rich nuc 98.9 5.5E-10 1.9E-14 107.5 2.6 82 404-485 61-147 (149)
291 3zyj_A Leucine-rich repeat-con 98.9 8E-10 2.7E-14 126.3 4.3 152 328-496 138-295 (440)
292 2o6s_A Variable lymphocyte rec 98.8 4E-09 1.4E-13 107.5 7.9 96 393-488 8-110 (208)
293 3rfs_A Internalin B, repeat mo 98.8 3.4E-09 1.2E-13 112.9 6.6 145 329-488 44-191 (272)
294 1p9a_G Platelet glycoprotein I 98.8 1.5E-09 5.2E-14 117.0 3.7 79 406-485 99-179 (290)
295 4ezg_A Putative uncharacterize 98.8 1.7E-09 5.7E-14 109.5 3.1 77 407-484 88-165 (197)
296 3vq2_A TLR4, TOLL-like recepto 98.8 1.2E-09 4E-14 130.0 2.0 90 404-496 470-561 (606)
297 2ell_A Acidic leucine-rich nuc 98.8 3.1E-09 1.1E-13 104.4 4.7 85 404-488 68-157 (168)
298 2v9t_B SLIT homolog 2 protein 98.8 6.6E-09 2.2E-13 107.2 7.2 95 393-488 12-114 (220)
299 4g8a_A TOLL-like receptor 4; l 98.8 5.3E-09 1.8E-13 124.4 7.3 91 404-496 491-583 (635)
300 2o6q_A Variable lymphocyte rec 98.8 5.8E-09 2E-13 111.0 6.1 146 329-488 40-191 (270)
301 3v47_A TOLL-like receptor 5B a 98.7 4.2E-09 1.5E-13 120.4 5.1 135 347-496 276-411 (455)
302 2o6r_A Variable lymphocyte rec 98.7 1.3E-08 4.4E-13 100.9 8.0 89 405-495 50-139 (177)
303 2xot_A Amphoterin-induced prot 98.7 1.8E-09 6.2E-14 120.1 1.9 150 331-495 44-204 (361)
304 2v70_A SLIT-2, SLIT homolog 2 98.7 7.2E-09 2.5E-13 106.9 6.3 84 405-488 55-139 (220)
305 2z66_A Variable lymphocyte rec 98.7 1.9E-09 6.5E-14 116.7 1.1 90 404-495 172-263 (306)
306 1ozn_A Reticulon 4 receptor; N 98.7 5.7E-09 1.9E-13 111.8 4.8 146 330-488 60-211 (285)
307 3j0a_A TOLL-like receptor 5; m 98.7 3.8E-09 1.3E-13 130.9 3.7 85 404-495 477-562 (844)
308 2xot_A Amphoterin-induced prot 98.7 4.9E-09 1.7E-13 116.6 3.7 143 330-487 22-172 (361)
309 4ezg_A Putative uncharacterize 98.7 8.7E-09 3E-13 104.2 5.3 79 405-486 110-189 (197)
310 3sg8_A APH(2'')-ID; antibiotic 98.7 1.5E-08 5.1E-13 109.8 7.4 184 572-768 26-287 (304)
311 2je0_A Acidic leucine-rich nuc 98.7 1.4E-08 4.6E-13 97.6 6.0 78 407-486 17-96 (149)
312 3v47_A TOLL-like receptor 5B a 98.7 5.1E-09 1.7E-13 119.8 3.2 142 333-488 17-164 (455)
313 4g8a_A TOLL-like receptor 4; l 98.7 9.6E-09 3.3E-13 122.1 5.6 137 337-487 42-182 (635)
314 2z62_A TOLL-like receptor 4, v 98.7 1.1E-08 3.9E-13 108.9 5.3 84 405-488 74-159 (276)
315 1xku_A Decorin; proteoglycan, 98.7 1.2E-08 3.9E-13 111.8 5.5 143 328-487 123-272 (330)
316 4eco_A Uncharacterized protein 98.7 2.9E-09 9.8E-14 127.7 0.6 78 406-485 272-360 (636)
317 3vq2_A TLR4, TOLL-like recepto 98.7 9.7E-09 3.3E-13 122.0 4.6 76 406-481 103-180 (606)
318 2ell_A Acidic leucine-rich nuc 98.7 2E-08 6.7E-13 98.6 6.0 82 405-488 22-105 (168)
319 1dce_A Protein (RAB geranylger 98.6 2.2E-08 7.6E-13 118.1 7.0 81 404-487 460-542 (567)
320 3t6q_A CD180 antigen; protein- 98.6 7E-09 2.4E-13 123.3 2.4 88 405-495 474-562 (606)
321 4ecn_A Leucine-rich repeat pro 98.6 1.4E-08 4.7E-13 125.2 4.8 152 326-488 448-629 (876)
322 2z63_A TOLL-like receptor 4, v 98.6 8.8E-09 3E-13 121.3 3.0 89 405-495 443-533 (570)
323 2z66_A Variable lymphocyte rec 98.6 7.1E-09 2.4E-13 112.2 1.8 84 405-488 148-233 (306)
324 2z81_A CD282 antigen, TOLL-lik 98.6 2.2E-08 7.6E-13 117.4 6.1 95 393-488 5-108 (549)
325 2z81_A CD282 antigen, TOLL-lik 98.6 1.5E-08 5.1E-13 118.8 4.3 82 406-495 430-512 (549)
326 2z62_A TOLL-like receptor 4, v 98.6 1.1E-08 3.6E-13 109.1 2.7 87 405-491 98-188 (276)
327 2id5_A Lingo-1, leucine rich r 98.6 1.3E-08 4.5E-13 117.3 3.7 89 405-495 246-335 (477)
328 4b8c_D Glucose-repressible alc 98.6 7.8E-09 2.7E-13 125.7 1.7 114 347-477 225-339 (727)
329 1dce_A Protein (RAB geranylger 98.6 1.5E-08 5.2E-13 119.5 3.3 77 405-483 484-565 (567)
330 2id5_A Lingo-1, leucine rich r 98.6 2.1E-08 7.2E-13 115.5 4.3 146 330-488 36-186 (477)
331 2r9u_A Variable lymphocyte rec 98.6 7.4E-08 2.5E-12 95.5 7.4 73 404-477 54-127 (174)
332 2ft3_A Biglycan; proteoglycan, 98.6 1.4E-08 4.7E-13 111.4 2.2 79 407-486 193-272 (332)
333 3j0a_A TOLL-like receptor 5; m 98.6 3.2E-08 1.1E-12 122.6 5.6 145 329-487 27-183 (844)
334 3g39_A Variable lymphocyte rec 98.5 7.2E-08 2.5E-12 95.1 6.5 67 405-471 52-119 (170)
335 3zyi_A Leucine-rich repeat-con 98.5 7.1E-08 2.4E-12 110.5 7.1 96 393-488 55-157 (452)
336 3oja_A Leucine-rich immune mol 98.5 9.7E-09 3.3E-13 119.1 -0.2 80 406-488 143-224 (487)
337 3oja_B Anopheles plasmodium-re 98.5 3.5E-08 1.2E-12 117.3 4.6 129 327-468 52-185 (597)
338 4b8c_D Glucose-repressible alc 98.5 3.5E-08 1.2E-12 120.0 4.6 79 405-486 245-324 (727)
339 1wwl_A Monocyte differentiatio 98.5 3.5E-08 1.2E-12 107.3 3.7 175 289-488 94-284 (312)
340 2z7x_B TOLL-like receptor 1, v 98.5 7.4E-08 2.5E-12 112.2 6.6 76 407-485 45-122 (520)
341 2z7x_B TOLL-like receptor 1, v 98.5 4.1E-08 1.4E-12 114.3 4.4 84 406-495 398-483 (520)
342 2z80_A TOLL-like receptor 2, v 98.5 9.2E-08 3.1E-12 105.7 6.7 95 393-488 31-134 (353)
343 3cvr_A Invasion plasmid antige 98.5 4.8E-08 1.6E-12 115.0 4.5 67 407-481 160-233 (571)
344 3a79_B TLR6, VLRB.59, TOLL-lik 98.5 6.2E-08 2.1E-12 114.2 5.3 85 405-495 426-512 (562)
345 1m9s_A Internalin B; cell inva 98.5 5.2E-08 1.8E-12 115.7 4.6 137 327-486 66-205 (605)
346 1m9s_A Internalin B; cell inva 98.5 3.8E-08 1.3E-12 116.8 3.4 75 406-486 108-183 (605)
347 1h6t_A Internalin B; cell adhe 98.5 5.4E-08 1.9E-12 104.8 4.3 138 327-487 69-209 (291)
348 3oja_B Anopheles plasmodium-re 98.5 6E-08 2E-12 115.3 4.8 130 345-488 50-181 (597)
349 1ziw_A TOLL-like receptor 3; i 98.5 1.1E-07 3.8E-12 114.5 7.1 148 328-488 27-181 (680)
350 3t6q_A CD180 antigen; protein- 98.5 1.2E-07 4E-12 112.7 6.7 95 394-488 14-115 (606)
351 3o6n_A APL1; leucine-rich repe 98.5 7E-08 2.4E-12 108.1 4.5 78 407-485 93-172 (390)
352 2z63_A TOLL-like receptor 4, v 98.4 7.2E-08 2.5E-12 113.4 4.5 75 406-480 99-175 (570)
353 3a79_B TLR6, VLRB.59, TOLL-lik 98.4 7.4E-08 2.5E-12 113.5 4.5 146 329-488 334-483 (562)
354 1h6t_A Internalin B; cell adhe 98.4 8E-08 2.7E-12 103.5 4.4 137 329-488 49-188 (291)
355 1wwl_A Monocyte differentiatio 98.4 4.9E-08 1.7E-12 106.1 2.4 79 406-485 120-208 (312)
356 3o53_A Protein LRIM1, AGAP0063 98.4 2.5E-08 8.5E-13 108.7 0.0 143 327-486 121-270 (317)
357 1xeu_A Internalin C; cellular 98.4 7.7E-08 2.6E-12 102.0 3.8 74 407-486 106-180 (263)
358 1ziw_A TOLL-like receptor 3; i 98.4 8.7E-08 3E-12 115.5 4.7 143 332-488 10-155 (680)
359 3o6n_A APL1; leucine-rich repe 98.4 1.4E-07 4.6E-12 105.8 5.7 144 326-487 45-195 (390)
360 1a9n_A U2A', U2A'; complex (nu 98.4 1E-07 3.4E-12 94.4 3.8 75 407-484 42-119 (176)
361 1h6u_A Internalin H; cell adhe 98.4 1.5E-07 5.2E-12 102.1 5.6 74 406-485 128-202 (308)
362 4glp_A Monocyte differentiatio 98.4 4.6E-08 1.6E-12 106.2 1.1 59 407-468 224-286 (310)
363 2ifg_A High affinity nerve gro 98.4 1.7E-07 5.9E-12 103.2 5.5 77 411-489 12-91 (347)
364 3cvr_A Invasion plasmid antige 98.4 1.2E-07 4E-12 111.7 4.3 119 327-476 81-200 (571)
365 3zyj_A Leucine-rich repeat-con 98.4 2.9E-07 9.7E-12 105.1 7.1 96 393-488 44-146 (440)
366 2ft3_A Biglycan; proteoglycan, 98.4 2.9E-07 9.8E-12 100.8 6.5 92 393-487 34-132 (332)
367 1xku_A Decorin; proteoglycan, 98.4 3.5E-07 1.2E-11 99.9 7.2 91 393-486 32-129 (330)
368 1h6u_A Internalin H; cell adhe 98.4 1.5E-07 5.3E-12 102.0 3.8 78 405-488 105-183 (308)
369 4fmz_A Internalin; leucine ric 98.4 1.6E-07 5.4E-12 103.3 3.9 77 405-485 263-340 (347)
370 1a9n_A U2A', U2A'; complex (nu 98.3 2.4E-07 8.2E-12 91.7 4.7 81 404-486 61-148 (176)
371 2z80_A TOLL-like receptor 2, v 98.3 1.3E-07 4.4E-12 104.5 2.7 139 334-487 39-183 (353)
372 2xwt_C Thyrotropin receptor; s 98.3 5.4E-08 1.9E-12 101.3 -0.5 73 407-481 80-158 (239)
373 3r70_A Aminoglycoside phosphot 98.3 3.5E-06 1.2E-10 91.8 13.8 131 572-715 43-237 (320)
374 3g06_A SSPH2 (leucine-rich rep 98.3 3.3E-07 1.1E-11 109.0 5.9 67 407-478 241-308 (622)
375 1jl5_A Outer protein YOPM; leu 98.3 2.7E-07 9.2E-12 105.9 4.6 74 407-487 131-204 (454)
376 3o53_A Protein LRIM1, AGAP0063 98.3 6.6E-08 2.3E-12 105.3 -0.7 81 407-493 169-250 (317)
377 1jl5_A Outer protein YOPM; leu 98.3 2.8E-07 9.5E-12 105.8 4.3 135 327-487 112-246 (454)
378 1o6v_A Internalin A; bacterial 98.3 3.4E-07 1.2E-11 105.2 4.4 75 405-485 307-382 (466)
379 2xwt_C Thyrotropin receptor; s 98.2 3.1E-07 1E-11 95.5 2.6 77 409-486 132-213 (239)
380 4glp_A Monocyte differentiatio 98.2 4.4E-07 1.5E-11 98.4 3.9 81 406-486 116-205 (310)
381 3bz5_A Internalin-J, INLJ; leu 98.2 5.9E-07 2E-11 103.1 5.0 73 406-486 105-178 (457)
382 3g06_A SSPH2 (leucine-rich rep 98.2 3.6E-07 1.2E-11 108.7 3.0 133 328-492 163-296 (622)
383 1xeu_A Internalin C; cellular 98.2 1.1E-06 3.9E-11 92.9 6.3 72 406-484 62-134 (263)
384 3rw6_A Nuclear RNA export fact 98.2 9.6E-07 3.3E-11 93.4 4.8 80 405-484 168-257 (267)
385 3d1u_A Putative fructosamine-3 98.2 6.3E-06 2.2E-10 88.4 11.3 137 572-714 21-215 (288)
386 1ds9_A Outer arm dynein; leuci 98.2 1E-07 3.4E-12 96.4 -2.8 77 406-487 47-124 (198)
387 3bz5_A Internalin-J, INLJ; leu 98.2 1.1E-06 3.7E-11 100.9 5.4 134 328-488 66-201 (457)
388 4ay9_X Follicle-stimulating ho 98.2 7.1E-07 2.4E-11 98.6 3.7 96 393-489 10-115 (350)
389 4fmz_A Internalin; leucine ric 98.2 7.9E-07 2.7E-11 97.6 4.0 80 404-487 240-320 (347)
390 3tdw_A Gentamicin resistance p 98.1 1.7E-05 6E-10 85.7 13.7 135 572-715 25-224 (306)
391 1o6v_A Internalin A; bacterial 98.1 1.5E-06 5E-11 99.9 5.0 76 405-486 285-361 (466)
392 3ats_A Putative uncharacterize 98.1 1.1E-05 3.7E-10 89.0 11.8 79 572-650 26-122 (357)
393 1ds9_A Outer arm dynein; leuci 98.1 2E-07 6.9E-12 94.1 -3.0 79 407-488 18-103 (198)
394 3ovc_A Hygromycin-B 4-O-kinase 98.0 2E-05 6.9E-10 87.4 10.9 73 572-649 47-122 (362)
395 2ast_B S-phase kinase-associat 98.0 1.3E-06 4.6E-11 95.3 0.8 81 406-486 92-176 (336)
396 4gkh_A Aminoglycoside 3'-phosp 97.9 2.7E-05 9.3E-10 82.2 10.2 133 574-715 32-223 (272)
397 2ca6_A RAN GTPase-activating p 97.9 1.9E-06 6.7E-11 96.2 1.3 82 405-486 214-311 (386)
398 2ca6_A RAN GTPase-activating p 97.8 6.1E-06 2.1E-10 92.2 2.8 81 407-487 32-131 (386)
399 2ast_B S-phase kinase-associat 97.8 2.8E-06 9.6E-11 92.7 -0.1 82 406-487 117-204 (336)
400 3goz_A Leucine-rich repeat-con 97.8 6.9E-06 2.4E-10 91.0 2.7 66 408-473 52-128 (362)
401 4ay9_X Follicle-stimulating ho 97.7 2.8E-05 9.6E-10 85.7 5.6 73 405-477 52-127 (350)
402 3rw6_A Nuclear RNA export fact 97.6 1.6E-05 5.4E-10 84.1 2.6 81 412-495 148-234 (267)
403 2q83_A YTAA protein; 2635576, 97.6 0.00026 9E-09 77.0 12.5 138 573-714 39-251 (346)
404 3goz_A Leucine-rich repeat-con 97.6 1.4E-05 4.9E-10 88.4 2.1 81 407-487 80-176 (362)
405 2olc_A MTR kinase, methylthior 97.6 0.00024 8.4E-09 79.4 11.1 73 572-646 36-120 (397)
406 1z7x_W Ribonuclease inhibitor; 97.5 1.9E-05 6.5E-10 90.0 0.6 80 407-486 313-406 (461)
407 3jr1_A Putative fructosamine-3 97.5 0.00044 1.5E-08 74.9 11.1 136 572-711 42-232 (312)
408 2pyw_A Uncharacterized protein 97.2 0.0012 4.1E-08 74.5 11.4 78 684-764 231-312 (420)
409 1z7x_W Ribonuclease inhibitor; 97.2 4.9E-05 1.7E-09 86.5 -0.1 82 406-487 255-350 (461)
410 3un9_A NLR family member X1; l 97.2 7E-05 2.4E-09 83.3 1.0 81 407-487 155-248 (372)
411 2ppq_A HSK, HK, homoserine kin 97.0 0.0021 7.1E-08 69.4 10.2 140 573-714 29-216 (322)
412 3f7w_A Putative fructosamine-3 96.9 0.0027 9.3E-08 67.5 10.3 73 572-648 21-97 (288)
413 3dxq_A Choline/ethanolamine ki 96.9 0.0042 1.4E-07 66.5 11.1 127 572-715 24-202 (301)
414 1io0_A Tropomodulin; LRR prote 96.8 0.0003 1E-08 70.0 1.2 37 408-444 37-78 (185)
415 3un9_A NLR family member X1; l 96.7 0.00031 1.1E-08 78.1 1.0 37 408-444 102-139 (372)
416 1nw1_A Choline kinase (49.2 KD 96.7 0.0042 1.4E-07 70.3 10.3 71 572-648 79-159 (429)
417 1io0_A Tropomodulin; LRR prote 96.7 0.00045 1.5E-08 68.7 1.5 80 407-486 65-159 (185)
418 3ogk_B Coronatine-insensitive 96.6 0.00035 1.2E-08 82.1 0.4 79 407-486 164-251 (592)
419 3csv_A Aminoglycoside phosphot 96.6 0.011 3.7E-07 64.2 11.9 138 573-715 25-217 (333)
420 2qg7_A Ethanolamine kinase PV0 96.5 0.011 3.9E-07 67.2 12.1 73 572-649 114-189 (458)
421 3ogk_B Coronatine-insensitive 96.5 0.00044 1.5E-08 81.3 0.1 83 406-488 435-523 (592)
422 3feg_A Choline/ethanolamine ki 96.5 0.0083 2.9E-07 66.5 10.3 138 572-714 56-253 (379)
423 3c5i_A Choline kinase; choline 96.3 0.012 4.2E-07 64.8 10.3 72 572-648 39-121 (369)
424 1zyl_A Hypothetical protein YI 96.0 0.015 5.2E-07 62.7 8.8 138 573-714 33-222 (328)
425 2p1m_B Transport inhibitor res 95.9 0.0012 4E-08 77.6 -0.3 79 407-486 432-514 (594)
426 3rfe_A Platelet glycoprotein I 95.9 0.0068 2.3E-07 56.5 5.0 53 411-466 12-67 (130)
427 2p1m_B Transport inhibitor res 95.9 0.0016 5.5E-08 76.4 0.6 58 408-465 131-195 (594)
428 3i1a_A Spectinomycin phosphotr 95.8 0.03 1E-06 61.0 10.5 68 575-648 32-108 (339)
429 2yle_A Protein spire homolog 1 95.7 0.048 1.6E-06 55.0 10.3 102 647-767 34-135 (229)
430 2ra8_A Uncharacterized protein 95.4 0.0033 1.1E-07 69.4 0.7 63 405-467 250-320 (362)
431 3f2s_A CK, chetk-alpha, cholin 95.0 0.095 3.3E-06 58.3 11.1 139 572-714 58-279 (401)
432 3sb4_A Hypothetical leucine ri 94.7 0.019 6.6E-07 62.0 4.4 72 408-483 227-302 (329)
433 3rfe_A Platelet glycoprotein I 94.4 0.035 1.2E-06 51.6 4.7 40 405-444 29-68 (130)
434 3sb4_A Hypothetical leucine ri 94.1 0.037 1.3E-06 59.8 4.9 75 406-483 249-326 (329)
435 3e4g_A ATP synthase subunit S, 94.0 0.017 5.9E-07 56.6 1.8 80 407-486 61-147 (176)
436 3mes_A Choline kinase; malaria 93.8 0.1 3.6E-06 58.6 7.9 72 572-648 76-157 (424)
437 2ra8_A Uncharacterized protein 92.1 0.065 2.2E-06 58.9 3.0 81 407-487 193-288 (362)
438 1pgv_A TMD-1, tropomodulin TMD 90.8 0.063 2.1E-06 53.6 1.1 37 408-444 42-83 (197)
439 3g15_A CK, chetk-alpha, cholin 87.5 1.5 5E-05 48.6 9.4 28 687-714 246-279 (401)
440 1pgv_A TMD-1, tropomodulin TMD 87.1 0.23 7.8E-06 49.5 2.1 59 407-465 70-137 (197)
441 4fdw_A Leucine rich hypothetic 81.1 1.3 4.3E-05 49.2 5.0 74 408-485 158-233 (401)
442 4fdw_A Leucine rich hypothetic 77.1 3.2 0.00011 45.9 6.8 76 406-486 270-353 (401)
443 4ann_A ESSB; membrane protein, 76.9 2.8 9.4E-05 42.1 5.4 117 619-770 43-159 (215)
444 4ano_A ESSB; membrane protein, 75.9 3.9 0.00013 41.1 6.3 115 619-769 48-163 (219)
445 2ks1_B Epidermal growth factor 70.2 1.6 5.6E-05 31.9 1.4 15 522-536 26-40 (44)
446 3e4g_A ATP synthase subunit S, 67.8 1.3 4.4E-05 43.2 0.5 61 405-465 83-150 (176)
447 2l2t_A Receptor tyrosine-prote 64.9 1.9 6.6E-05 31.5 0.8 15 522-536 25-39 (44)
448 3cxl_A N-chimerin; SH2, RHO-GA 63.3 0.81 2.8E-05 51.9 -2.2 58 570-630 146-213 (463)
449 2jwa_A Receptor tyrosine-prote 62.0 3.6 0.00012 30.0 1.8 25 512-536 16-40 (44)
450 2w47_A Lipolytic enzyme, G-D-S 46.9 1.7E+02 0.0058 26.6 11.7 87 88-178 42-132 (144)
451 4h09_A Hypothetical leucine ri 45.3 22 0.00075 38.3 5.7 74 408-485 264-340 (379)
452 2w3j_A Carbohydrate binding mo 44.4 1.9E+02 0.0065 26.5 11.4 85 90-178 43-130 (145)
453 4fs7_A Uncharacterized protein 42.8 16 0.00055 39.8 4.1 73 407-484 297-372 (394)
454 4gt6_A Cell surface protein; l 38.3 37 0.0013 36.8 6.2 72 407-483 288-362 (394)
455 2w87_A Esterase D, XYL-CBM35; 35.1 2.5E+02 0.0084 25.4 10.4 83 90-176 43-130 (139)
456 4fs7_A Uncharacterized protein 34.0 27 0.00094 37.9 4.1 55 406-464 319-376 (394)
457 1cja_A Protein (actin-fragmin 31.5 1.8E+02 0.0063 30.9 9.7 134 577-715 79-237 (342)
458 2wz8_A Cellulosome protein doc 31.2 3.1E+02 0.01 25.5 10.5 89 90-178 51-150 (156)
459 4h09_A Hypothetical leucine ri 30.9 30 0.001 37.2 3.8 57 406-464 285-343 (379)
460 2vzp_A Aocbm35, EXO-beta-D-glu 28.3 3.1E+02 0.01 24.1 10.7 86 85-174 38-127 (127)
461 4gt6_A Cell surface protein; l 27.6 53 0.0018 35.5 5.1 57 407-466 311-369 (394)
462 2l3b_A Conserved protein found 26.7 68 0.0023 28.8 4.4 71 56-128 24-103 (130)
463 1nrp_R Receptor based peptide 24.8 22 0.00075 21.8 0.6 15 205-219 7-21 (26)
464 1nro_R Receptor based peptide 23.4 25 0.00086 21.7 0.7 15 205-219 7-21 (27)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.4e-50 Score=444.90 Aligned_cols=255 Identities=27% Similarity=0.440 Sum_probs=208.5
Q ss_pred hhcccccccccEEEEEEEEc-------ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 569 NFERTLGKGGFGTVYYGRLN-------EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~-------~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
.+.+.||+|+||.||+|++. ++.||||+++..+....++|.+|+++|++++|||||+++|+|.+++..++|||
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 123 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 35678999999999999864 36799999998877788899999999999999999999999999999999999
Q ss_pred eccCCChhhhhcccc-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEe
Q 002809 642 FMANGNLQEYLSDIS-------------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLA 708 (878)
Q Consensus 642 y~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~ 708 (878)
||++|+|.++++... ...++|.+++.|+.|||+||+|||+. +||||||||+||||++++.+||+
T Consensus 124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEEC
T ss_pred cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEc
Confidence 999999999997532 24699999999999999999999998 99999999999999999999999
Q ss_pred ecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHH
Q 002809 709 DFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLI 787 (878)
Q Consensus 709 DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~ 787 (878)
|||+++.+.............||+.|||||++.+..++.++|||||||++|||+| |+.||...+..+. . ..+
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~---~----~~i 273 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA---I----DCI 273 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH---H----HHH
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH---H----HHH
Confidence 9999987754444444455679999999999999999999999999999999999 8999988765432 1 122
Q ss_pred hcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 002809 788 AKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLA 842 (878)
Q Consensus 788 ~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~ 842 (878)
.++... ..+..+..++.+|+.+||+.||++||||+||++.|+.+.+
T Consensus 274 ~~g~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 274 TQGREL---------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHTCCC---------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HcCCCC---------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 222211 1222344578899999999999999999999999998764
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7.5e-51 Score=442.98 Aligned_cols=255 Identities=28% Similarity=0.472 Sum_probs=215.7
Q ss_pred hhcccccccccEEEEEEEEc-------ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 569 NFERTLGKGGFGTVYYGRLN-------EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~-------~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
.+.+.||+|+||.||+|++. +..||||+++..+....++|.+|+++|++++|||||+++|+|.+++..++|||
T Consensus 16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 95 (299)
T 4asz_A 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 95 (299)
T ss_dssp EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence 45789999999999999863 36799999998877778899999999999999999999999999999999999
Q ss_pred eccCCChhhhhcccc-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeec
Q 002809 642 FMANGNLQEYLSDIS-----------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADF 710 (878)
Q Consensus 642 y~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DF 710 (878)
||++|+|.++|+... ...++|.+++.|+.|||+||+|||++ +||||||||+|||+++++.+||+||
T Consensus 96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCc
Confidence 999999999997532 35799999999999999999999998 9999999999999999999999999
Q ss_pred CCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhc
Q 002809 711 GLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAK 789 (878)
Q Consensus 711 Gla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~ 789 (878)
|+++...............||+.|||||++.+..++.++|||||||++|||+| |+.||...+..+ +. ..+..
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~----~~i~~ 245 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VI----ECITQ 245 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HH----HHHHH
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HHHHc
Confidence 99987654433333444579999999999999999999999999999999999 899998876543 11 22223
Q ss_pred CCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 002809 790 GDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLA 842 (878)
Q Consensus 790 ~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~ 842 (878)
+... ..+..+..++.+++.+||+.+|++||||+||++.|+++.+
T Consensus 246 ~~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 246 GRVL---------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp TCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC---------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 3221 1223344578899999999999999999999999998654
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.5e-51 Score=445.91 Aligned_cols=254 Identities=24% Similarity=0.434 Sum_probs=213.6
Q ss_pred HhhhcccccccccEEEEEEEEc-------ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCccee
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN-------EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~-------~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l 638 (878)
+.+|.+.||+|+||+||+|++. ++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3467889999999999999873 3679999997643 3345789999999999999999999999999999999
Q ss_pred EeeeccCCChhhhhcccc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc
Q 002809 639 IYEFMANGNLQEYLSDIS--------------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ 704 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~ 704 (878)
|||||++|+|.++|+... ...++|.+++.|+.|||+||+|||++ +||||||||+||||+++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 999999999999996432 24699999999999999999999998 9999999999999999999
Q ss_pred EEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 002809 705 AKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWV 783 (878)
Q Consensus 705 ~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v 783 (878)
+||+|||+++.+.............||+.|||||++.+..++.++|||||||++|||+| |++||...+..+ +.+
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~---~~~-- 258 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VVE-- 258 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH---HHH--
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH---HHH--
Confidence 99999999987754443344445679999999999999999999999999999999999 899998876543 222
Q ss_pred HHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002809 784 NSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSE 839 (878)
Q Consensus 784 ~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~ 839 (878)
.+..+... ..+..+...+.+++.+||+.+|++||||+||++.|+.
T Consensus 259 --~i~~~~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 259 --MIRNRQVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp --HHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred --HHHcCCCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 22333221 1233445678899999999999999999999999975
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-49 Score=430.89 Aligned_cols=255 Identities=29% Similarity=0.506 Sum_probs=203.7
Q ss_pred hhcccccccccEEEEEEEEcceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCC
Q 002809 569 NFERTLGKGGFGTVYYGRLNEIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANG 646 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 646 (878)
.+.+.||+|+||+||+|++.+ .||||+++.. .....+.|.+|+++|++++|||||+++|+|.+ +..++|||||++|
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gG 116 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp CEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred EEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCC
Confidence 467899999999999999866 5999998743 34566889999999999999999999999865 5689999999999
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcccc
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVST 726 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 726 (878)
+|.++|+.. ...++|.+++.|+.|||+||+|||++ +||||||||+||||++++++||+|||+|+............
T Consensus 117 sL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~ 192 (307)
T 3omv_A 117 SLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192 (307)
T ss_dssp BHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----------
T ss_pred CHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeec
Confidence 999999753 45699999999999999999999998 99999999999999999999999999998765443333445
Q ss_pred cccCCCCccCcccccc---CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 727 VVAGTPGYLDPEYYTS---NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 727 ~~~gt~~Y~APE~~~~---~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
..+||+.|||||++.+ ..++.++|||||||++|||+||+.||...+.... +...+..+.. .|.+. .
T Consensus 193 ~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~------~~~~~~~~~~----~p~~~-~ 261 (307)
T 3omv_A 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ------IIFMVGRGYA----SPDLS-K 261 (307)
T ss_dssp -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH------HHHHHHTTCC----CCCST-T
T ss_pred ccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH------HHHHHhcCCC----CCCcc-c
Confidence 5689999999999864 4689999999999999999999999987654321 1122222211 11111 1
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSEC 840 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~ 840 (878)
.+..+...+.+++.+||+.+|++||||+||++.|+.+
T Consensus 262 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 262 LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 2233456788999999999999999999999999865
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.7e-48 Score=424.81 Aligned_cols=268 Identities=25% Similarity=0.416 Sum_probs=203.9
Q ss_pred hhcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCC----cceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN----QTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~----~~~lV~Ey~~ 644 (878)
.+.+.||+|+||+||+|+++++.||||++...... ...+.+|+..+.+++|||||+++++|.+++ ..++|||||+
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~ 84 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp EEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred EEEEEEeeCCCeEEEEEEECCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCC
Confidence 35689999999999999999999999999754322 223345666667889999999999997654 5789999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGC-----KPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
+|+|.++|+. ..++|+.+++++.|+++||+|||+++ .++||||||||+||||+.++++||+|||+++.....
T Consensus 85 ~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 161 (303)
T 3hmm_A 85 HGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161 (303)
T ss_dssp TCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred CCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence 9999999974 46999999999999999999999763 568999999999999999999999999999876443
Q ss_pred CCC--cccccccCCCCccCccccccC------CCCCccchhhHHHHHHHHHhCCCCCCCCChHHH---------HHHHHH
Q 002809 720 ANT--HVSTVVAGTPGYLDPEYYTSN------RLTEKSDVYSFGVVILEIITCKPAISRINEEEK---------IHIRQW 782 (878)
Q Consensus 720 ~~~--~~~~~~~gt~~Y~APE~~~~~------~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~---------~~l~~~ 782 (878)
... ......+||+.|||||++.+. .++.++|||||||++|||+||++|+........ ....+
T Consensus 162 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~- 240 (303)
T 3hmm_A 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE- 240 (303)
T ss_dssp TTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH-
T ss_pred CCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHH-
Confidence 321 122345799999999999764 467899999999999999999887654321100 00111
Q ss_pred HHHHHhcCCcccccCCcccccc-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 783 VNSLIAKGDIKSIVDPRLQEDF-DANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 783 v~~~~~~~~~~~iid~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
+...+..+ .++|.+.... +.++...+.+++.+||+.||++||||+||++.|+++.+.+.
T Consensus 241 ~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 241 MRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 11222211 2233333222 34566788999999999999999999999999999876554
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.9e-48 Score=431.89 Aligned_cols=259 Identities=28% Similarity=0.440 Sum_probs=213.9
Q ss_pred hhhcccccccccEEEEEEEEcc-------eeEEEEEeccCC-hhhHHHHHHHHHHHHHhcc-cceeeeeecccCC-Ccce
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-------IDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHH-RNLTSLVGHCDED-NQTA 637 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-------~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H-~nIv~l~g~~~~~-~~~~ 637 (878)
+.+.+.||+|+||.||+|++.+ +.||||++.... ....+.|.+|+++|.+++| ||||+++|+|.+. +..+
T Consensus 66 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~ 145 (353)
T 4ase_A 66 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 145 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCE
T ss_pred eEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEE
Confidence 3567899999999999998753 569999998654 3456789999999999965 8999999999664 5689
Q ss_pred eEeeeccCCChhhhhcccc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC
Q 002809 638 LIYEFMANGNLQEYLSDIS--------------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL 703 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~ 703 (878)
+|||||++|+|.++|+... ...+++.+++.++.|||+||+|||++ +||||||||+|||+++++
T Consensus 146 iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 222 (353)
T 4ase_A 146 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKN 222 (353)
T ss_dssp EEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCC
Confidence 9999999999999997532 24589999999999999999999998 999999999999999999
Q ss_pred cEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 002809 704 QAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQW 782 (878)
Q Consensus 704 ~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 782 (878)
.+||+|||+|+.+.............||+.|||||++.+..++.++|||||||++|||+| |+.||......+.
T Consensus 223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~------ 296 (353)
T 4ase_A 223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------ 296 (353)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH------
T ss_pred CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH------
Confidence 999999999997755444444455679999999999999999999999999999999998 8999987553221
Q ss_pred HHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 783 VNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 783 v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
+...+.++... ..+..+..++.+++.+||+.||++|||++||+++|++++++.
T Consensus 297 ~~~~i~~g~~~---------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 297 FCRRLKEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp HHHHHHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCC---------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 22223333211 112233457889999999999999999999999999998653
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.2e-47 Score=422.23 Aligned_cols=248 Identities=22% Similarity=0.383 Sum_probs=202.8
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
|.+.+.||+|+||.||+|+.. ++.||||++... .....+.|.+|+++|++++|||||++++++.+++..++|||||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~ 105 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC 105 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 455689999999999999875 488999999754 3445678999999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++|+|.++|.......+++.+++.++.||+.||+|||++ +||||||||+||||++++.+||+|||+++.+... ..
T Consensus 106 ~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~--~~ 180 (350)
T 4b9d_A 106 EGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--VE 180 (350)
T ss_dssp TTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH--HH
T ss_pred CCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC--cc
Confidence 999999999865566789999999999999999999998 9999999999999999999999999999876322 12
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
.....+||+.|||||++.+..|+.++|||||||++|||+||++||...+..+. ... +..+.... +
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~------~~~-i~~~~~~~-----~--- 245 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL------VLK-IISGSFPP-----V--- 245 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------HHH-HHHTCCCC-----C---
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH------HHH-HHcCCCCC-----C---
Confidence 23446799999999999999999999999999999999999999987665331 111 22222211 1
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+.....++.+|+.+||+.||++|||++|+++.
T Consensus 246 -~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 246 -SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11223467899999999999999999999863
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-46 Score=407.07 Aligned_cols=245 Identities=27% Similarity=0.502 Sum_probs=198.0
Q ss_pred hhcccccccccEEEEEEEEcc--eeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccC----CCcceeEe
Q 002809 569 NFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDE----DNQTALIY 640 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~----~~~~~lV~ 640 (878)
.|.+.||+|+||.||+|+... ..||+|++... .....+.|.+|+++|++++|||||+++++|.. +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 456789999999999999864 78999998754 34456789999999999999999999999854 35689999
Q ss_pred eeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC-CCcEEEeecCCccccccC
Q 002809 641 EFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE-KLQAKLADFGLSKSFATD 719 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~-~~~~kL~DFGla~~~~~~ 719 (878)
|||++|+|.+++++ ...+++..+..++.||+.||+|||++ .++||||||||+||||+. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 184 (290)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence 99999999999976 56799999999999999999999987 224999999999999984 79999999999975422
Q ss_pred CCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCc
Q 002809 720 ANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 720 ~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
......+||+.|||||++.+ .|+.++|||||||++|||+||++||........ +...+..+.....
T Consensus 185 ---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~------~~~~i~~~~~~~~---- 250 (290)
T 3fpq_A 185 ---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ------IYRRVTSGVKPAS---- 250 (290)
T ss_dssp ---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH------HHHHHTTTCCCGG----
T ss_pred ---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH------HHHHHHcCCCCCC----
Confidence 22345689999999999875 699999999999999999999999976543221 1122222221111
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.+.....++.+++.+||+.||++|||++|+++
T Consensus 251 ----~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 ----FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ----GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11112236789999999999999999999976
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.9e-47 Score=416.66 Aligned_cols=245 Identities=21% Similarity=0.333 Sum_probs=206.0
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANG 646 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 646 (878)
.+.+.||+|+||.||+|+.. ++.||||++........+.+.+|+++|++++|||||++++++.+++..++|||||++|
T Consensus 77 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 156 (346)
T 4fih_A 77 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 156 (346)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTE
T ss_pred EEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 44578999999999999985 4889999998665555678899999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcccc
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVST 726 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 726 (878)
+|.+++.. ..+++..+..++.||+.||+|||++ +||||||||+||||+.++.+||+|||+++.+.... ....
T Consensus 157 ~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~ 228 (346)
T 4fih_A 157 ALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRK 228 (346)
T ss_dssp EHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CCBC
T ss_pred cHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Cccc
Confidence 99999874 4599999999999999999999998 99999999999999999999999999998764332 2234
Q ss_pred cccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 727 VVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 727 ~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
..+||+.|||||++.+..|+.++|||||||++|||++|++||...+..+... .+..+. .+.+. ...
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-------~i~~~~-----~~~~~--~~~ 294 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-------MIRDNL-----PPRLK--NLH 294 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-------HHHHSS-----CCCCS--CGG
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-------HHHcCC-----CCCCC--ccc
Confidence 5689999999999999999999999999999999999999998765543211 111111 11111 111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
....++.+++.+||+.||++|||++|+++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 23346789999999999999999999876
No 10
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4e-47 Score=413.40 Aligned_cols=246 Identities=25% Similarity=0.379 Sum_probs=208.7
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||+||+++.. ++.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy 113 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 567789999999999999875 4889999997542 23457899999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++|+|.++++. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+......
T Consensus 114 ~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 114 AKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 999999999976 45799999999999999999999998 9999999999999999999999999999987554444
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
......+||+.|||||++.+..|+.++||||+||++|||+||++||...+..+.. ..+.++.. .+..
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~-------~~i~~~~~------~~p~ 255 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF-------AKIIKLEY------DFPE 255 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHTCC------CCCT
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHcCCC------CCCc
Confidence 4455678999999999999999999999999999999999999999876653311 11222221 1111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
....++.+++.+||+.||++|||++|++.
T Consensus 256 ----~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 256 ----KFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp ----TCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred ----ccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 22346789999999999999999998753
No 11
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.3e-47 Score=415.27 Aligned_cols=253 Identities=20% Similarity=0.256 Sum_probs=206.1
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANG 646 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 646 (878)
.+.+.||+|+||.||+|+.. ++.||||+++.... +.+|+.+|++++|||||++++++.+++..++|||||++|
T Consensus 61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred EeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 34568999999999999976 48899999976432 257999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC-cEEEeecCCccccccCCCC---
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL-QAKLADFGLSKSFATDANT--- 722 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~-~~kL~DFGla~~~~~~~~~--- 722 (878)
+|.+++++ ...+++..+..++.||+.||+|||++ +||||||||+||||+.++ ++||+|||+|+.+......
T Consensus 136 ~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~ 210 (336)
T 4g3f_A 136 SLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 210 (336)
T ss_dssp BHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---------
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccce
Confidence 99999976 45799999999999999999999998 999999999999999987 6999999999877543221
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
......+||+.|||||++.+..++.++|||||||++|||+||++||...+..... .. +..+... ..
T Consensus 211 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~------~~-i~~~~~~-------~~ 276 (336)
T 4g3f_A 211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC------LK-IASEPPP-------IR 276 (336)
T ss_dssp ---CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH------HH-HHHSCCG-------GG
T ss_pred ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH------HH-HHcCCCC-------ch
Confidence 1223467999999999999999999999999999999999999999875543211 11 1111110 01
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
..+......+.+++.+||+.||++|||++|+++.|..+++...
T Consensus 277 ~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 277 EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 1223334578899999999999999999999999999886543
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=9.4e-46 Score=418.34 Aligned_cols=246 Identities=21% Similarity=0.325 Sum_probs=206.9
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+|+.. ++.||||++........+.+.+|+++|++++|||||++++++.+++..++|||||++
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence 345578999999999999986 488999999876666667899999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
|+|.++++. ..+++.++..++.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.+.... ...
T Consensus 233 G~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~ 304 (423)
T 4fie_A 233 GALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRR 304 (423)
T ss_dssp EEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CCB
T ss_pred CcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC--ccc
Confidence 999999864 4599999999999999999999998 99999999999999999999999999998764332 223
Q ss_pred ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccC
Q 002809 726 TVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFD 805 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~ 805 (878)
...+||+.|||||++.+..|+.++|||||||++|||++|++||...+..+... .+..+.. +.+. ..
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-------~i~~~~~-----~~~~--~~ 370 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-------MIRDNLP-----PRLK--NL 370 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-------HHHHSCC-----CCCS--CT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-------HHHcCCC-----CCCc--cc
Confidence 45689999999999999999999999999999999999999998766543221 1222111 1111 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 806 ANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 806 ~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.....++.+|+.+||+.||++|||++|+++
T Consensus 371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122346789999999999999999999876
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.9e-45 Score=394.54 Aligned_cols=242 Identities=24% Similarity=0.373 Sum_probs=190.2
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
|.+.+.||+|+||+||+|+.. ++.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy 94 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 456789999999999999875 4889999997542 23356799999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+ +|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+......
T Consensus 95 ~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-- 166 (275)
T 3hyh_A 95 A-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp C-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred C-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC--
Confidence 9 6899999976 56799999999999999999999998 99999999999999999999999999998654322
Q ss_pred cccccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRL-TEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||...+.... ...+.++.. .+.
T Consensus 167 -~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~-------~~~i~~~~~------~~p 232 (275)
T 3hyh_A 167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-------FKNISNGVY------TLP 232 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHHHHTCC------CCC
T ss_pred -ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH-------HHHHHcCCC------CCC
Confidence 2334679999999999998876 5799999999999999999999987654321 112222221 111
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.....++.+++.+||+.||++|||++|+++
T Consensus 233 ----~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 ----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 112346789999999999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.5e-46 Score=403.17 Aligned_cols=239 Identities=26% Similarity=0.362 Sum_probs=192.7
Q ss_pred hhhcccccccccEEEEEEEEc-----ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEe
Q 002809 568 NNFERTLGKGGFGTVYYGRLN-----EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIY 640 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~-----~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~ 640 (878)
+.+.+.||+|+||+||+|+.. ++.||||++.+.. ......+.+|+++|++++|||||++++++.+++..++||
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 105 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 105 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 466789999999999999862 3679999997542 223457889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCC
Q 002809 641 EFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDA 720 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~ 720 (878)
||+++|+|.+++.+ ...+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 106 Ey~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 106 DFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp CCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 99999999999976 45799999999999999999999998 99999999999999999999999999998653322
Q ss_pred CCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 721 NTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 721 ~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
......+||+.|||||++.+..++.++||||+||++|||+||++||...+..+.. ..+.++.. .+
T Consensus 181 --~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~-------~~i~~~~~------~~ 245 (304)
T 3ubd_A 181 --KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM-------TMILKAKL------GM 245 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHCCC------CC
T ss_pred --ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHH-------HHHHcCCC------CC
Confidence 2233467999999999999999999999999999999999999999876654321 11222221 11
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTM 830 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm 830 (878)
+.....++.+++.+||+.||++|||+
T Consensus 246 ----p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 246 ----PQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred ----CCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 11223467899999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8.2e-44 Score=387.90 Aligned_cols=247 Identities=22% Similarity=0.370 Sum_probs=185.5
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCC----------
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN---------- 634 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~---------- 634 (878)
+.+.+.||+|+||+||+|+.. ++.||||++.... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 345689999999999999875 5889999997544 345578999999999999999999999986543
Q ss_pred --cceeEeeeccCCChhhhhcccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecC
Q 002809 635 --QTALIYEFMANGNLQEYLSDIS-KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFG 711 (878)
Q Consensus 635 --~~~lV~Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFG 711 (878)
..++||||+++|+|.+++.... ....++..++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccCc
Confidence 3689999999999999997643 23456778899999999999999998 99999999999999999999999999
Q ss_pred CccccccCCCCc----------ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 002809 712 LSKSFATDANTH----------VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQ 781 (878)
Q Consensus 712 la~~~~~~~~~~----------~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~ 781 (878)
+|+.+....... .....+||+.|||||++.+..|+.++|||||||++|||++ ||.... +....
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--~~~~~-- 236 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--ERVRT-- 236 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHHH--
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--HHHHH--
Confidence 998774332211 1234579999999999999999999999999999999997 665321 11111
Q ss_pred HHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 782 WVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 782 ~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
. ..+....... ........+.+++.+||+.||++|||+.|+++
T Consensus 237 -~-~~~~~~~~p~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 237 -L-TDVRNLKFPP---------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -H-HHHHTTCCCH---------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -H-HHHhcCCCCC---------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 1111111111 11122335678999999999999999999876
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.2e-42 Score=380.63 Aligned_cols=271 Identities=42% Similarity=0.708 Sum_probs=239.6
Q ss_pred hcccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCCh
Q 002809 570 FERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGNL 648 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 648 (878)
+.+.||+|+||.||+|+..+ ..||||++........+.+.+|++++++++||||+++++++..++..++||||+++|+|
T Consensus 43 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 43 HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122 (321)
T ss_dssp CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence 45789999999999999864 88999999877767778999999999999999999999999999999999999999999
Q ss_pred hhhhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcccc
Q 002809 649 QEYLSDIS--KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVST 726 (878)
Q Consensus 649 ~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 726 (878)
.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++............
T Consensus 123 ~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 199 (321)
T 2qkw_B 123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLST 199 (321)
T ss_dssp GGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBC
T ss_pred HHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 99997643 34699999999999999999999998 99999999999999999999999999998654333333344
Q ss_pred cccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 727 VVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 727 ~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+.....+|.......+.+...+++.+......
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (321)
T 2qkw_B 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP 279 (321)
T ss_dssp CCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCH
T ss_pred ccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCH
Confidence 45689999999999988999999999999999999999999987665555566777777777778888888888777788
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
+....+.+++.+||+.+|++||+++||++.|+.+++.
T Consensus 280 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 280 ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 8899999999999999999999999999999998753
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-42 Score=388.83 Aligned_cols=260 Identities=20% Similarity=0.335 Sum_probs=200.4
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeeccc------CCCcce
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCD------EDNQTA 637 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~------~~~~~~ 637 (878)
|.+.+.||+|+||+||+|+.. ++.||||++... .....+.+.+|+++|++++|||||++++++. +.+..+
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 455689999999999999875 588999999754 3345578899999999999999999999864 346789
Q ss_pred eEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccc
Q 002809 638 LIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFA 717 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 717 (878)
+|||||+ |+|.+++.. ...+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+++.+.
T Consensus 136 ivmE~~~-g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 136 VVLDLME-SDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEECCS-EEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEeCCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 9999995 789999976 56799999999999999999999998 99999999999999999999999999998764
Q ss_pred cCCC--CcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcc-
Q 002809 718 TDAN--THVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIK- 793 (878)
Q Consensus 718 ~~~~--~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~- 793 (878)
.... .......+||+.|||||++.+. .++.++||||+||++|||++|++||...+..+..... ..........
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I---~~~~g~p~~~~ 286 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI---MMVLGTPSPAV 286 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHH---HHHHCCCCGGG
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHH---HHhcCCCChHH
Confidence 3221 2233457899999999998875 5699999999999999999999999887654432221 1111110000
Q ss_pred --cc-----------cCCcccc---ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 794 --SI-----------VDPRLQE---DFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 794 --~i-----------id~~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+ +.+.... ........++.+|+.+||+.||++|||++|++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00 0000000 0001123467899999999999999999998763
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.1e-41 Score=376.31 Aligned_cols=196 Identities=26% Similarity=0.396 Sum_probs=166.9
Q ss_pred hhhcccccccccEEEEEEEEc-----ceeEEEEEeccCChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN-----EIDVAVKMLSSSSAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~-----~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
|.+.+.||+|+||+||+|+.. ++.||+|++..... ..++.+|+++|.++ +|||||++++++.+++..++|||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 456789999999999999753 47899999876543 35688999999998 69999999999999999999999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC-CcEEEeecCCccccccCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK-LQAKLADFGLSKSFATDA 720 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~-~~~kL~DFGla~~~~~~~ 720 (878)
|+++|+|.++++ .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+......
T Consensus 101 ~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 101 YLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp CCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred CCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 999999999985 389999999999999999999998 99999999999999877 799999999998653221
Q ss_pred C--------------------------CcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCh
Q 002809 721 N--------------------------THVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINE 773 (878)
Q Consensus 721 ~--------------------------~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~ 773 (878)
. .......+||+.|||||++.+. .++.++||||+||+++||++|+.||.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~ 252 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence 1 0112235799999999999775 589999999999999999999999966543
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=9.8e-42 Score=375.98 Aligned_cols=284 Identities=39% Similarity=0.681 Sum_probs=242.0
Q ss_pred CCCCCHHHHHHHHhhh--cccccccccEEEEEEEEcc-eeEEEEEeccCChh-hHHHHHHHHHHHHHhcccceeeeeecc
Q 002809 555 SRHLSYSDVVKITNNF--ERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQ-GFQQFQAEVKLLMRVHHRNLTSLVGHC 630 (878)
Q Consensus 555 ~~~~s~~dl~~~t~~f--~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~-~~~~f~~Ei~~L~~l~H~nIv~l~g~~ 630 (878)
...+++.++.....+| .+.||+|+||.||+|+..+ +.||||++...... ....+.+|++++.+++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 4567888887777666 4789999999999998754 88999999765322 234789999999999999999999999
Q ss_pred cCCCcceeEeeeccCCChhhhhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEe
Q 002809 631 DEDNQTALIYEFMANGNLQEYLSDIS--KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLA 708 (878)
Q Consensus 631 ~~~~~~~lV~Ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~ 708 (878)
...+..++||||+++|+|.++++... ...+++..+..++.|++.||+|||+.+.++|+||||||+|||++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999997643 3459999999999999999999999877899999999999999999999999
Q ss_pred ecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHHHH
Q 002809 709 DFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINE--EEKIHIRQWVNSL 786 (878)
Q Consensus 709 DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~--~~~~~l~~~v~~~ 786 (878)
|||+++...... ........||+.|+|||++.+..++.++|||||||+++||++|+.||..... .......+|+...
T Consensus 177 Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 177 DFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCSSCEECCSSS-SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred cCccccccCccc-ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999998764332 2233445699999999999988999999999999999999999999963221 1223466788777
Q ss_pred HhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002809 787 IAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSE 839 (878)
Q Consensus 787 ~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~ 839 (878)
.....+..+.+..+...........+.+++.+||+.+|++|||++||+++|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 77778888888888888888899999999999999999999999999999986
No 20
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.6e-40 Score=359.25 Aligned_cols=281 Identities=37% Similarity=0.610 Sum_probs=230.8
Q ss_pred CCCCCHHHHHHHHhhhc--------ccccccccEEEEEEEEcceeEEEEEeccC----ChhhHHHHHHHHHHHHHhcccc
Q 002809 555 SRHLSYSDVVKITNNFE--------RTLGKGGFGTVYYGRLNEIDVAVKMLSSS----SAQGFQQFQAEVKLLMRVHHRN 622 (878)
Q Consensus 555 ~~~~s~~dl~~~t~~f~--------~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~----~~~~~~~f~~Ei~~L~~l~H~n 622 (878)
...|++.++.+++.+|. +.||+|+||.||+|+..++.||||++... .....+.+.+|++++++++|||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 45789999999999986 56999999999999998899999998753 2334678999999999999999
Q ss_pred eeeeeecccCCCcceeEeeeccCCChhhhhcccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC
Q 002809 623 LTSLVGHCDEDNQTALIYEFMANGNLQEYLSDIS-KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE 701 (878)
Q Consensus 623 Iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~ 701 (878)
|+++++++...+..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997543 45699999999999999999999998 9999999999999999
Q ss_pred CCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 002809 702 KLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQ 781 (878)
Q Consensus 702 ~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~ 781 (878)
++.+||+|||+++...............|++.|+|||.+.+ .++.++||||||+++|||++|++||....... .+..
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~ 245 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--LLLD 245 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS--BTTH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH--HHHH
Confidence 99999999999987654333333344578999999998875 58899999999999999999999998754322 1112
Q ss_pred HHHHHHh-cCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 002809 782 WVNSLIA-KGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLA 842 (878)
Q Consensus 782 ~v~~~~~-~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~ 842 (878)
+...... ...+.+.+++.+. ..+......+.+++.+||+.+|++||++++|++.|+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhcccccc-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2222211 1223444554443 3456677889999999999999999999999999998653
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.3e-40 Score=393.98 Aligned_cols=248 Identities=24% Similarity=0.370 Sum_probs=207.7
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
|.+.+.||+|+||.||+++.. ++.||+|++........+.+.+|+++|++++|||||++++++.+++..++|||||++
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~g 238 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 238 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence 456789999999999999885 488999999887777778899999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC--CcEEEeecCCccccccCCCCc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK--LQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~--~~~kL~DFGla~~~~~~~~~~ 723 (878)
|+|.++|.. ....+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+++.+....
T Consensus 239 g~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~--- 311 (573)
T 3uto_A 239 GELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ--- 311 (573)
T ss_dssp CBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS---
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC---
Confidence 999999864 245699999999999999999999998 99999999999999854 899999999998774332
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
.....+||+.|||||++.+..|+.++||||+||++|||++|++||...+..+.. ..+..+... +.+...
T Consensus 312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~-------~~i~~~~~~--~~~~~~-- 380 (573)
T 3uto_A 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL-------RNVKSCDWN--MDDSAF-- 380 (573)
T ss_dssp EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-------HHHHTTCCC--CCSGGG--
T ss_pred ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-------HHHHhCCCC--CCcccc--
Confidence 233467999999999999999999999999999999999999999877654321 112222110 111111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.....++.+|+.+||+.||++||+++|+++
T Consensus 381 --~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 381 --SGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 122346789999999999999999999987
No 22
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.5e-40 Score=359.10 Aligned_cols=258 Identities=30% Similarity=0.500 Sum_probs=204.1
Q ss_pred hhhcccccccccEEEEEEEEcceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+|+..+..||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 39 y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 3p86_A 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118 (309)
T ss_dssp EEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTT
T ss_pred ceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCC
Confidence 3456899999999999999999999999987653 34567899999999999999999999999999999999999999
Q ss_pred CChhhhhcccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 646 GNLQEYLSDIS-KKVLSSQERLRIAVESAQGLEYLHNGCKPP--IVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 646 gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
|+|.+++.... ...+++..++.++.|+++||+|||+. + |+||||||+|||++.++.+||+|||+++......
T Consensus 119 ~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~-- 193 (309)
T 3p86_A 119 GSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF-- 193 (309)
T ss_dssp CBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred CcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc--
Confidence 99999997633 23499999999999999999999998 7 9999999999999999999999999997543221
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... + ...... .
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~---~---~~~~~~-----~---- 258 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA---V---GFKCKR-----L---- 258 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH---H---HHSCCC-----C----
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---H---HhcCCC-----C----
Confidence 122345699999999999999999999999999999999999999987765432111 1 111110 0
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
..+.....++.+++.+||+.+|++||+++|+++.|+.+++...
T Consensus 259 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 259 EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 1112233468899999999999999999999999999886543
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.7e-40 Score=368.73 Aligned_cols=257 Identities=29% Similarity=0.480 Sum_probs=212.6
Q ss_pred hhcccccccccEEEEEEEEc---------ceeEEEEEeccCC-hhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcce
Q 002809 569 NFERTLGKGGFGTVYYGRLN---------EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTA 637 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~---------~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~ 637 (878)
.+.+.||+|+||.||+|+.. +..||||++.... ....+.+.+|++++.++ +||||++++++|...+..+
T Consensus 84 ~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ 163 (370)
T 2psq_A 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 163 (370)
T ss_dssp EEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCE
T ss_pred EeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEE
Confidence 45689999999999999863 2569999997653 34567899999999999 8999999999999999999
Q ss_pred eEeeeccCCChhhhhcccc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC
Q 002809 638 LIYEFMANGNLQEYLSDIS--------------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL 703 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~ 703 (878)
+||||+++|+|.+++.... ...+++..++.++.||++||+|||++ +|+||||||+|||++.++
T Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENN 240 (370)
T ss_dssp EEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTC
T ss_pred EEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCCC
Confidence 9999999999999997643 24589999999999999999999998 999999999999999999
Q ss_pred cEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 002809 704 QAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQW 782 (878)
Q Consensus 704 ~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 782 (878)
.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||+| |+.||......+..
T Consensus 241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~----- 315 (370)
T 2psq_A 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF----- 315 (370)
T ss_dssp CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-----
T ss_pred CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----
Confidence 999999999987644333233334557889999999999999999999999999999999 99999876554321
Q ss_pred HHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 783 VNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 783 v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
..+..+.. ...+..+...+.+++.+||+.+|++||+++|+++.|++++...
T Consensus 316 --~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 316 --KLLKEGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp --HHHHTTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --HHHhcCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 11222211 1112233457889999999999999999999999999988653
No 24
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.7e-40 Score=389.87 Aligned_cols=246 Identities=24% Similarity=0.330 Sum_probs=196.0
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCCh------hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSSA------QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~~------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV 639 (878)
+.+.++||+|+||.||+++... +.||||++.+... ........++.++..++|||||++++++.+.+.+++|
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV 270 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 270 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence 3556899999999999999864 8899999975321 1122233446666777899999999999999999999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
|||++||+|.++|.. ...+++..+..++.||+.||+|||++ +||||||||+||||+.+|.+||+|||+|+.+...
T Consensus 271 mEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 271 LDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp ECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 999999999999976 45799999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCCcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCC
Q 002809 720 ANTHVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDP 798 (878)
Q Consensus 720 ~~~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~ 798 (878)
. ....+||+.|||||++.. ..|+.++||||+||++|||++|++||..........+. ..+.....
T Consensus 346 ~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~----~~i~~~~~------ 411 (689)
T 3v5w_A 346 K----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMTLTMAV------ 411 (689)
T ss_dssp C----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH----HHHHHCCC------
T ss_pred C----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH----HhhcCCCC------
Confidence 2 234689999999999964 57999999999999999999999999764432221111 11111111
Q ss_pred ccccccCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 002809 799 RLQEDFDANSVWKAVELAMACLSPTGNQRPT-----MSQVVME 836 (878)
Q Consensus 799 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----m~evl~~ 836 (878)
.+. .....++.+|+.+||+.||++|++ ++||+++
T Consensus 412 ~~p----~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 412 ELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp CCC----TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred CCC----ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 111 122346789999999999999998 6777653
No 25
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.7e-40 Score=358.38 Aligned_cols=256 Identities=25% Similarity=0.371 Sum_probs=210.2
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANG 646 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 646 (878)
.+.+.||+|+||.||+++.. +..||+|++........+.|.+|++++.+++||||+++++++.+++..++||||+++|
T Consensus 13 ~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 92 (310)
T 3s95_A 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGG 92 (310)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCC
Confidence 45689999999999999986 4889999998777777889999999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc---
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH--- 723 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~--- 723 (878)
+|.++++.. ...+++.+++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 93 ~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 93 TLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp BHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred cHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 999999753 45699999999999999999999998 99999999999999999999999999998764322111
Q ss_pred ---------ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHHHHHhcCC
Q 002809 724 ---------VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKI---HIRQWVNSLIAKGD 791 (878)
Q Consensus 724 ---------~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~---~l~~~v~~~~~~~~ 791 (878)
......||+.|+|||++.+..++.++||||||+++|||++|..|+......... .......
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~------- 241 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD------- 241 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH-------
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc-------
Confidence 111456999999999999999999999999999999999999988654321110 0111100
Q ss_pred cccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 792 IKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 792 ~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
...+......+.+++.+||+.+|++||+++|+++.|+++.....
T Consensus 242 ----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 242 ----------RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp ----------HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ----------ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00111222357789999999999999999999999999776543
No 26
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.2e-40 Score=363.91 Aligned_cols=266 Identities=26% Similarity=0.379 Sum_probs=208.7
Q ss_pred hhcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCC----cceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN----QTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~----~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+|+..++.||||++..... ....+.+|+.++.+++||||+++++++.... ..++||||++
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~ 105 (322)
T 3soc_A 27 QLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHE 105 (322)
T ss_dssp EEEEEEECSTTCEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhheecccCceEEEEEEECCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCC
Confidence 4568999999999999999999999999975533 3355677999999999999999999997654 3699999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-------CCCeEecCCCCccEEEcCCCcEEEeecCCccccc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGC-------KPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFA 717 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 717 (878)
+|+|.++++. ..+++..++.++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||+++.+.
T Consensus 106 ~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~ 182 (322)
T 3soc_A 106 KGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182 (322)
T ss_dssp TCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEEC
T ss_pred CCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccc
Confidence 9999999975 45999999999999999999999752 3489999999999999999999999999998765
Q ss_pred cCCCCcccccccCCCCccCcccccc-----CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHH----------HHHHH
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTS-----NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKI----------HIRQW 782 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~-----~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~----------~l~~~ 782 (878)
............||+.|+|||++.+ ..++.++|||||||++|||+||+.||......... ...++
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (322)
T 3soc_A 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDM 262 (322)
T ss_dssp TTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHH
T ss_pred cccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhh
Confidence 4433333344679999999999986 35667899999999999999999999764321111 11111
Q ss_pred HHHHHhcCCcccccCCcccccc-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 783 VNSLIAKGDIKSIVDPRLQEDF-DANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 783 v~~~~~~~~~~~iid~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
..... .... .+.+.... .......+.+++.+||+.||++|||++||++.|+++.+.
T Consensus 263 ~~~~~-~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 263 QEVVV-HKKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHT-TSCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhh-cccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111 1111 11222111 234566799999999999999999999999999997654
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=358.09 Aligned_cols=256 Identities=25% Similarity=0.437 Sum_probs=208.8
Q ss_pred hhhcccccccccEEEEEEEEc-----ceeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN-----EIDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~-----~~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
+.+.+.||+|+||.||+|+.. +..||||++... .....+.|.+|++++.+++||||+++++++..++..++|||
T Consensus 51 y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 130 (325)
T 3kul_A 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130 (325)
T ss_dssp EEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEE
T ss_pred eEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEee
Confidence 345688999999999999974 256999999865 44456789999999999999999999999999999999999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.++++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 131 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 131 YMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp CCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred CCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 99999999999653 45699999999999999999999998 999999999999999999999999999987643322
Q ss_pred C-cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCc
Q 002809 722 T-HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 722 ~-~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
. .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+... .+..+.
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-------~~~~~~-------- 271 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS-------SVEEGY-------- 271 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH-------HHHTTC--------
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH-------HHHcCC--------
Confidence 1 12223446778999999999999999999999999999999 999998766543211 111111
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
....+......+.+++.+||+.+|++||+++||++.|+++++.
T Consensus 272 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 272 -RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred -CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 0111223345788999999999999999999999999998754
No 28
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.2e-40 Score=356.35 Aligned_cols=262 Identities=27% Similarity=0.423 Sum_probs=205.6
Q ss_pred hhhcccccccccEEEEEEEE------cceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccC--CCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRL------NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDE--DNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~------~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--~~~~~lV 639 (878)
+.+.+.||+|+||.||++++ .++.||||++........+.+.+|++++.+++||||+++++++.. ....++|
T Consensus 12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 91 (295)
T 3ugc_A 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 91 (295)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEE
T ss_pred hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEE
Confidence 45678999999999999985 347899999988777777899999999999999999999998854 4568999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
|||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 92 MEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 9999999999999753 34599999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCC-cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHH---------HHHHHHHHHHhc
Q 002809 720 ANT-HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKI---------HIRQWVNSLIAK 789 (878)
Q Consensus 720 ~~~-~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~---------~l~~~v~~~~~~ 789 (878)
... .......++..|+|||.+.+..++.++||||||+++|||+||..|+.....+... .........+..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 221 1222344677899999999999999999999999999999999988653221100 001111111111
Q ss_pred CCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 002809 790 GDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLA 842 (878)
Q Consensus 790 ~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~ 842 (878)
+. ....+.....++.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 248 ~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 248 NG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp TC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cC---------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 11 111223344578899999999999999999999999999764
No 29
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.5e-39 Score=363.32 Aligned_cols=259 Identities=28% Similarity=0.444 Sum_probs=209.3
Q ss_pred hhhcccccccccEEEEEEEEc-------ceeEEEEEeccCC-hhhHHHHHHHHHHHHHh-cccceeeeeecccCCC-cce
Q 002809 568 NNFERTLGKGGFGTVYYGRLN-------EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDN-QTA 637 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~-~~~ 637 (878)
+.+.+.||+|+||.||+|++. ++.||||++.... ....+.+.+|++++.++ +||||+++++++...+ ..+
T Consensus 24 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~ 103 (359)
T 3vhe_A 24 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 103 (359)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCE
T ss_pred eeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceE
Confidence 345689999999999999842 2789999998653 34457899999999999 7999999999987755 489
Q ss_pred eEeeeccCCChhhhhccccC------------------------------------------------------------
Q 002809 638 LIYEFMANGNLQEYLSDISK------------------------------------------------------------ 657 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~------------------------------------------------------------ 657 (878)
+||||+++|+|.++++....
T Consensus 104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (359)
T 3vhe_A 104 VIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPE 183 (359)
T ss_dssp EEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------
T ss_pred EEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccccc
Confidence 99999999999999976432
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcccccccCCCC
Q 002809 658 ----KVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPG 733 (878)
Q Consensus 658 ----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~ 733 (878)
..+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++...............||+.
T Consensus 184 ~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~ 260 (359)
T 3vhe_A 184 DLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260 (359)
T ss_dssp CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred chhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce
Confidence 1289999999999999999999998 999999999999999999999999999987644443334445668899
Q ss_pred ccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCHHHHHHH
Q 002809 734 YLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKA 812 (878)
Q Consensus 734 Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l 812 (878)
|+|||++.+..++.++|||||||++|||+| |+.||........ +...+..+.... .+.....++
T Consensus 261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~------~~~~~~~~~~~~---------~~~~~~~~l 325 (359)
T 3vhe_A 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKEGTRMR---------APDYTTPEM 325 (359)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH------HHHHHHHTCCCC---------CCTTCCHHH
T ss_pred eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH------HHHHHHcCCCCC---------CCCCCCHHH
Confidence 999999999999999999999999999999 9999987553321 111122221111 111223467
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 813 VELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 813 ~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
.+++.+||+.+|++||+++||+++|+++++..
T Consensus 326 ~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 326 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999988653
No 30
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=363.69 Aligned_cols=262 Identities=30% Similarity=0.466 Sum_probs=215.5
Q ss_pred hhhcccccccccEEEEEEEEcc---------eeEEEEEeccCC-hhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcc
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE---------IDVAVKMLSSSS-AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQT 636 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~---------~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~ 636 (878)
+.+.+.||+|+||.||+|+..+ ..||||++.... ....+.+.+|++++.++ +||||+++++++..++..
T Consensus 71 y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~ 150 (382)
T 3tt0_A 71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL 150 (382)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred eEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCce
Confidence 4567899999999999998632 579999997653 44567899999999999 899999999999999999
Q ss_pred eeEeeeccCCChhhhhcccc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC
Q 002809 637 ALIYEFMANGNLQEYLSDIS--------------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK 702 (878)
Q Consensus 637 ~lV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~ 702 (878)
++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.+
T Consensus 151 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTED 227 (382)
T ss_dssp EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTT
T ss_pred EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcCC
Confidence 99999999999999997643 24599999999999999999999998 99999999999999999
Q ss_pred CcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 002809 703 LQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQ 781 (878)
Q Consensus 703 ~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~ 781 (878)
+.+||+|||+++...............+++.|+|||++.+..++.++|||||||+++||++ |+.||......+. .
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~---~- 303 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL---F- 303 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH---H-
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH---H-
Confidence 9999999999987654333333344567889999999999999999999999999999999 9999987654431 1
Q ss_pred HHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002809 782 WVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARA 848 (878)
Q Consensus 782 ~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~ 848 (878)
..+..+... ..+.....++.+++.+||+.+|++||+++||++.|++++.......
T Consensus 304 ---~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 358 (382)
T 3tt0_A 304 ---KLLKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 358 (382)
T ss_dssp ---HHHHTTCCC---------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred ---HHHHcCCCC---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence 122222111 1112233468899999999999999999999999999987654333
No 31
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.4e-40 Score=368.44 Aligned_cols=255 Identities=25% Similarity=0.425 Sum_probs=209.0
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
.+.+.||+|+||.||+|+.. ++.||||++.... ....+.|.+|++++++++||||+++++++..++..++||||+++
T Consensus 117 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 196 (377)
T 3cbl_A 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196 (377)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred EEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCC
Confidence 45689999999999999986 4889999987653 33456789999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
|+|.++++. ....+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++...........
T Consensus 197 g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 197 GDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp CBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 999999975 244689999999999999999999998 9999999999999999999999999999764322111111
Q ss_pred ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccccc
Q 002809 726 TVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDF 804 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~ 804 (878)
....++..|+|||.+.+..++.++|||||||++|||+| |+.||......+. . ..+..+.. ...
T Consensus 273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~---~----~~~~~~~~---------~~~ 336 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT---R----EFVEKGGR---------LPC 336 (377)
T ss_dssp SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH---H----HHHHTTCC---------CCC
T ss_pred CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---H----HHHHcCCC---------CCC
Confidence 12235678999999998899999999999999999999 9999987665432 1 12222211 011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 805 DANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 805 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
+..+...+.+++.+||+.+|++|||+++|++.|+++...
T Consensus 337 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 222345788999999999999999999999999997653
No 32
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.3e-39 Score=364.81 Aligned_cols=255 Identities=25% Similarity=0.456 Sum_probs=199.1
Q ss_pred hhcccccccccEEEEEEEEc-----ceeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 569 NFERTLGKGGFGTVYYGRLN-----EIDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~-----~~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
.+.+.||+|+||.||+|+.. +..||||++... .....+.|.+|++++.+++||||+++++++...+..++||||
T Consensus 48 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 127 (373)
T 2qol_A 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEY 127 (373)
T ss_dssp CCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeC
Confidence 45689999999999999875 467999999765 344567899999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++|+|.++++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 128 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 128 MENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp CTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 9999999999753 44699999999999999999999998 9999999999999999999999999999876433221
Q ss_pred c-ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 723 H-VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 723 ~-~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
. ......++..|+|||++.+..++.++|||||||++|||++ |+.||......+.. + .+..+.
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~---~----~i~~~~--------- 267 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI---K----AVDEGY--------- 267 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH---H----HHHTTE---------
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH---H----HHHcCC---------
Confidence 1 1122335678999999999999999999999999999998 99999876654321 1 111111
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
....+......+.+++.+||+.+|++||+++||++.|++++..
T Consensus 268 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 1111223345788999999999999999999999999998865
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.7e-38 Score=348.56 Aligned_cols=263 Identities=21% Similarity=0.325 Sum_probs=213.4
Q ss_pred cccCCCCCHHHHHHHHhh------------hcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHH
Q 002809 552 EAKSRHLSYSDVVKITNN------------FERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMR 617 (878)
Q Consensus 552 ~~~~~~~s~~dl~~~t~~------------f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~ 617 (878)
......++++++.+++.. ..+.||+|+||.||+|+.. ++.||||++........+.+.+|+.++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 19 YFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD 98 (321)
T ss_dssp ------CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTT
T ss_pred eecCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHh
Confidence 334467888888888754 2458999999999999885 58899999987766667889999999999
Q ss_pred hcccceeeeeecccCCCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccE
Q 002809 618 VHHRNLTSLVGHCDEDNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNI 697 (878)
Q Consensus 618 l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NI 697 (878)
++||||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 172 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence 9999999999999999999999999999999999864 4699999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHH
Q 002809 698 LLNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKI 777 (878)
Q Consensus 698 Ll~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~ 777 (878)
|++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||+++||++|+.||.........
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~ 250 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM 250 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred EECCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999999999999987643322 223457999999999999999999999999999999999999999876543211
Q ss_pred HHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 778 HIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 778 ~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
. .+..... +.+.. .......+.+++.+||+.+|++||+++|+++.
T Consensus 251 ---~----~~~~~~~-----~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 251 ---K----RLRDSPP-----PKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp ---H----HHHHSSC-----CCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---H----HHhcCCC-----CCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 1111111 11110 11223467899999999999999999999873
No 34
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=5.5e-39 Score=370.74 Aligned_cols=250 Identities=29% Similarity=0.469 Sum_probs=209.1
Q ss_pred hhcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCC-cceeEeeeccCCC
Q 002809 569 NFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN-QTALIYEFMANGN 647 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-~~~lV~Ey~~~gs 647 (878)
.+.+.||+|+||.||+|+..++.||||+++... ..+.|.+|+++|++++||||+++++++.... ..++||||+++|+
T Consensus 196 ~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~ 273 (450)
T 1k9a_A 196 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273 (450)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCB
T ss_pred EEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCc
Confidence 456899999999999999999999999998654 4578999999999999999999999986654 7899999999999
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccccc
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTV 727 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 727 (878)
|.++++......+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 274 L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~~ 345 (450)
T 1k9a_A 274 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----QDT 345 (450)
T ss_dssp HHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC----------
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----ccC
Confidence 99999875555689999999999999999999998 9999999999999999999999999999854321 112
Q ss_pred ccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 728 VAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 728 ~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
..++..|+|||.+.+..++.++|||||||++|||+| |+.||......+.. ..+..+.. ...+.
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-------~~i~~~~~---------~~~p~ 409 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-------PRVEKGYK---------MDAPD 409 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH-------HHHHTTCC---------CCCCT
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-------HHHHcCCC---------CCCCC
Confidence 357889999999999999999999999999999999 99999876543311 11222211 11222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
.+...+.+++.+||+.+|++||+++++++.|+++...+
T Consensus 410 ~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 410 GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 34457889999999999999999999999999987654
No 35
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-38 Score=347.91 Aligned_cols=246 Identities=21% Similarity=0.374 Sum_probs=204.6
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANG 646 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 646 (878)
.+.+.||+|+||.||+|+.. ++.||||++........+.+.+|+.++++++||||+++++++..++..++||||+++|
T Consensus 23 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (297)
T 3fxz_A 23 TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 102 (297)
T ss_dssp CCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCC
Confidence 45678999999999999864 4889999997665555678999999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcccc
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVST 726 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 726 (878)
+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++........ ...
T Consensus 103 ~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 174 (297)
T 3fxz_A 103 SLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRS 174 (297)
T ss_dssp BHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--CBC
T ss_pred CHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--ccC
Confidence 99999975 3589999999999999999999998 999999999999999999999999999987643322 233
Q ss_pred cccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 727 VVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 727 ~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........... ....+. ... ..+.
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~------~~~~~~-~~~-------~~~~ 240 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL------IATNGT-PEL-------QNPE 240 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH------HHHHCS-CCC-------SCGG
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------HHhCCC-CCC-------CCcc
Confidence 45799999999999999999999999999999999999999987655332111 111111 010 0112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.....+.+++.+||+.||++||+++|+++.
T Consensus 241 ~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 241 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 233467899999999999999999999873
No 36
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.1e-39 Score=345.05 Aligned_cols=253 Identities=26% Similarity=0.479 Sum_probs=208.4
Q ss_pred hhcccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCC
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
.+.+.||+|+||.||+++..+ ..||+|++...... .+.+.+|++++++++||||+++++++.+++..++||||+++|+
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (269)
T 4hcu_A 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 91 (269)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCB
T ss_pred eeeheecCCCccEEEEEEecCCCeEEEEEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCc
Confidence 456899999999999999854 88999999865433 3679999999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccccc
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTV 727 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 727 (878)
|.+++.. ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... ......
T Consensus 92 L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~ 166 (269)
T 4hcu_A 92 LSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTG 166 (269)
T ss_dssp HHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTTS
T ss_pred HHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccc-cccccC
Confidence 9999965 245689999999999999999999998 99999999999999999999999999998653221 112223
Q ss_pred ccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 728 VAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 728 ~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
..++..|+|||.+.+..++.++||||||++++||++ |+.||......+.. .. +..+. ... .+.
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~------~~-~~~~~--~~~-------~~~ 230 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------ED-ISTGF--RLY-------KPR 230 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------HH-HHTTC--CCC-------CCT
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHH------HH-HhcCc--cCC-------CCC
Confidence 446778999999999999999999999999999999 99999876654321 11 11111 001 111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
.....+.+++.+||+.+|++||+++|+++.|+++.+.
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 1234678999999999999999999999999998754
No 37
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=353.12 Aligned_cols=255 Identities=31% Similarity=0.486 Sum_probs=210.4
Q ss_pred hhcccccccccEEEEEEEEcc-------eeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEe
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-------IDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIY 640 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-------~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~ 640 (878)
.+.+.||+|+||.||+|+..+ +.||||++.... ....+.+.+|++++.+++||||+++++++..++..++||
T Consensus 50 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 129 (343)
T 1luf_A 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF 129 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEE
Confidence 456889999999999999863 789999998653 445678999999999999999999999999999999999
Q ss_pred eeccCCChhhhhcccc----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEE
Q 002809 641 EFMANGNLQEYLSDIS----------------------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNIL 698 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NIL 698 (878)
||+++|+|.+++.... ...+++..++.++.||++||+|||+. +|+||||||+|||
T Consensus 130 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl 206 (343)
T 1luf_A 130 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCL 206 (343)
T ss_dssp ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred ecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEE
Confidence 9999999999997632 25799999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHH
Q 002809 699 LNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKI 777 (878)
Q Consensus 699 l~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~ 777 (878)
++.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||+| |+.||......+.
T Consensus 207 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~- 285 (343)
T 1luf_A 207 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV- 285 (343)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-
T ss_pred ECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHH-
Confidence 99999999999999986643332223334568889999999999899999999999999999999 9999987655331
Q ss_pred HHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 002809 778 HIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLA 842 (878)
Q Consensus 778 ~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~ 842 (878)
...+..+.... .+......+.+++.+||+.+|++||+++++++.|+++..
T Consensus 286 ------~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 286 ------IYYVRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp ------HHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ------HHHHhCCCcCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 11222222211 112233468899999999999999999999999998764
No 38
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=362.43 Aligned_cols=260 Identities=25% Similarity=0.418 Sum_probs=211.8
Q ss_pred hhhcccccccccEEEEEEEEc-------ceeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLN-------EIDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV 639 (878)
+.+.+.||+|+||.||+|++. +..||||++... .......+.+|+.++.+++||||+++++++......++|
T Consensus 73 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 152 (367)
T 3l9p_A 73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL 152 (367)
T ss_dssp EEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEE
Confidence 356789999999999999853 257999999754 344566899999999999999999999999999999999
Q ss_pred eeeccCCChhhhhcccc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC---cEEEeecC
Q 002809 640 YEFMANGNLQEYLSDIS-----KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL---QAKLADFG 711 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~---~~kL~DFG 711 (878)
|||+++|+|.+++.... ...+++..++.++.||++||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 153 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 153 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCCc
Confidence 99999999999997643 24699999999999999999999998 999999999999999555 59999999
Q ss_pred CccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcC
Q 002809 712 LSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKG 790 (878)
Q Consensus 712 la~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~ 790 (878)
+++.+.............||+.|+|||++.+..++.++|||||||++|||++ |+.||......+.. ..+..+
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~-------~~i~~~ 302 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL-------EFVTSG 302 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-------HHHHTT
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-------HHHHcC
Confidence 9986543333333344568899999999999999999999999999999998 99999876654321 111222
Q ss_pred CcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 002809 791 DIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMA 846 (878)
Q Consensus 791 ~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~ 846 (878)
... ..+......+.+++.+||+.+|++||+++||++.|+.+.+....
T Consensus 303 ~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~ 349 (367)
T 3l9p_A 303 GRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349 (367)
T ss_dssp CCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred CCC---------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhh
Confidence 111 11122334688999999999999999999999999998765443
No 39
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8e-39 Score=345.22 Aligned_cols=254 Identities=29% Similarity=0.499 Sum_probs=206.8
Q ss_pred hhcccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCC
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
.+.+.||+|+||.||+++..+ ..||+|++...... .+++.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 105 (283)
T 3gen_A 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 105 (283)
T ss_dssp EEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCB
T ss_pred HhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCc
Confidence 456899999999999999877 68999999865433 3679999999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccccc
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTV 727 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 727 (878)
|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 106 L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~ 180 (283)
T 3gen_A 106 LLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVG 180 (283)
T ss_dssp HHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHSTTS
T ss_pred HHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccc-cccccC
Confidence 99999753 34699999999999999999999998 99999999999999999999999999998653221 111223
Q ss_pred ccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 728 VAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 728 ~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
..+++.|+|||.+.+..++.++||||||+++|||+| |+.||.......... .+..+. .. ..+.
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~-------~~~~~~-----~~----~~~~ 244 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-------HIAQGL-----RL----YRPH 244 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-------HHHTTC-----CC----CCCT
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH-------HHhccc-----CC----CCCC
Confidence 346778999999998899999999999999999998 999998766543211 111111 00 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
.....+.+++.+||+.+|++||+++|+++.|++++..|
T Consensus 245 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 245 LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 12346789999999999999999999999999988654
No 40
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.3e-39 Score=350.78 Aligned_cols=258 Identities=26% Similarity=0.420 Sum_probs=211.8
Q ss_pred hhhcccccccccEEEEEEEE-------cceeEEEEEeccCC-hhhHHHHHHHHHHHHHh-cccceeeeeecccCCCccee
Q 002809 568 NNFERTLGKGGFGTVYYGRL-------NEIDVAVKMLSSSS-AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~-------~~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~l 638 (878)
+.+.+.||+|+||.||+|+. .++.||||++.... ....+.+.+|++++.++ +||||+++++++..++..++
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 104 (313)
T 1t46_A 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 104 (313)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred hhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEE
Confidence 35678999999999999985 23789999998654 34567899999999999 89999999999999999999
Q ss_pred EeeeccCCChhhhhccccC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC
Q 002809 639 IYEFMANGNLQEYLSDISK----------------KVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK 702 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~ 702 (878)
||||+++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+|||++.+
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHG 181 (313)
T ss_dssp EEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETT
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcCC
Confidence 9999999999999976432 2489999999999999999999998 99999999999999999
Q ss_pred CcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 002809 703 LQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQ 781 (878)
Q Consensus 703 ~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~ 781 (878)
+.+||+|||+++...............+++.|+|||.+.+..++.++||||||++++||+| |+.||........ ..
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~- 258 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--FY- 258 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--HH-
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH--HH-
Confidence 9999999999987654433333334557889999999999999999999999999999999 9999987654321 11
Q ss_pred HHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 782 WVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 782 ~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
.....+.. . ..+......+.+++.+||+.+|++||+++|+++.|++++..
T Consensus 259 ---~~~~~~~~-~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 259 ---KMIKEGFR-M--------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp ---HHHHHTCC-C--------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHhccCCC-C--------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11111110 0 01112234688999999999999999999999999998864
No 41
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.1e-38 Score=344.85 Aligned_cols=257 Identities=30% Similarity=0.503 Sum_probs=202.0
Q ss_pred hhhcccccccccEEEEEEEEcceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLNEIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+|+..+ .+|+|+++.. .....+.|.+|++++++++||||+++++++. .+..++||||+++
T Consensus 38 ~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~ 115 (307)
T 3lb7_A 38 VMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEG 115 (307)
T ss_dssp CCEEEEEEECSSCEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSS
T ss_pred eEEEeEecCCCCeEEEEEEECC-EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCC
Confidence 4567899999999999998765 5899988753 3445678999999999999999999999875 4568999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
|+|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...........
T Consensus 116 ~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~ 191 (307)
T 3lb7_A 116 SSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191 (307)
T ss_dssp CBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----------
T ss_pred CcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccc
Confidence 999999974 256799999999999999999999998 9999999999999999999999999999865432333333
Q ss_pred ccccCCCCccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 726 TVVAGTPGYLDPEYYT---SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
....||+.|+|||++. +..++.++|||||||++|||++|+.||......+.. .. ....+... +.+.
T Consensus 192 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~--~~----~~~~~~~~----~~~~- 260 (307)
T 3lb7_A 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI--IF----MVGRGYAS----PDLS- 260 (307)
T ss_dssp --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH--HH----HHHHTCCC----CCST-
T ss_pred cCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH--HH----HHhcCCCC----cchh-
Confidence 4457999999999986 567889999999999999999999999876543321 11 11112111 1111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECL 841 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~ 841 (878)
.....+...+.+++.+||+.+|++||++.||++.|+.+.
T Consensus 261 ~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 111223357889999999999999999999999999865
No 42
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.4e-39 Score=354.89 Aligned_cols=254 Identities=26% Similarity=0.413 Sum_probs=202.7
Q ss_pred hhcccccccccEEEEEEEEcc------eeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 569 NFERTLGKGGFGTVYYGRLNE------IDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~------~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
.+.+.||+|+||.||+|+... .+||+|.+... .....+.|.+|++++.+++||||++++++|..+. .++|+|
T Consensus 18 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e 96 (327)
T 3poz_A 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQ 96 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEE
T ss_pred ccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEE
Confidence 456899999999999998742 24688888644 3345678999999999999999999999998754 789999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 97 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 97 LMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred ecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 99999999999753 45699999999999999999999998 999999999999999999999999999987754443
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
........+|..|+|||++.+..++.++|||||||++|||+| |+.||.......... .+..+..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-------~~~~~~~-------- 237 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-------ILEKGER-------- 237 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-------HHHTTCC--------
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH-------HHHcCCC--------
Confidence 333344557889999999999999999999999999999999 999998766543211 1111111
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
...+......+.+++.+||+.+|++||+++|+++.|+++...
T Consensus 238 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 238 -LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 111222344788999999999999999999999999997654
No 43
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-39 Score=356.37 Aligned_cols=258 Identities=28% Similarity=0.443 Sum_probs=208.1
Q ss_pred hhhcccccccccEEEEEEEE-------cceeEEEEEeccC-ChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCccee
Q 002809 568 NNFERTLGKGGFGTVYYGRL-------NEIDVAVKMLSSS-SAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~-------~~~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~l 638 (878)
+.+.+.||+|+||.||+|+. .+..||||++... .....+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 47 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 126 (344)
T 1rjb_A 47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL 126 (344)
T ss_dssp EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEE
Confidence 45578999999999999986 2367999999754 334567899999999999 89999999999999999999
Q ss_pred EeeeccCCChhhhhccccC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccE
Q 002809 639 IYEFMANGNLQEYLSDISK---------------------KVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNI 697 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NI 697 (878)
||||+++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+||
T Consensus 127 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NI 203 (344)
T 1rjb_A 127 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNV 203 (344)
T ss_dssp EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGE
T ss_pred EEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhE
Confidence 9999999999999976432 3489999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHH
Q 002809 698 LLNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEK 776 (878)
Q Consensus 698 Ll~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~ 776 (878)
|++.++.+||+|||++................||+.|+|||.+.+..++.++|||||||++|||+| |+.||........
T Consensus 204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 283 (344)
T 1rjb_A 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 283 (344)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence 999999999999999987654443333444567889999999999999999999999999999998 9999987654321
Q ss_pred HHHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 777 IHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 777 ~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
+. ..+..+.. ...+......+.+++.+||+.+|++||++.|+++.|+.++..
T Consensus 284 --~~----~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 284 --FY----KLIQNGFK---------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp --HH----HHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred --HH----HHHhcCCC---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11 11222210 111122234788999999999999999999999999997754
No 44
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.2e-39 Score=350.03 Aligned_cols=257 Identities=28% Similarity=0.443 Sum_probs=211.7
Q ss_pred hhhcccccccccEEEEEEEEc-------ceeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLN-------EIDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV 639 (878)
+.+.+.||+|+||.||+++.. +..||||++... .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 104 (314)
T 2ivs_A 25 LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI 104 (314)
T ss_dssp EEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEE
Confidence 345689999999999999862 277999999764 345567899999999999999999999999999999999
Q ss_pred eeeccCCChhhhhccccC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccE
Q 002809 640 YEFMANGNLQEYLSDISK----------------------KVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNI 697 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NI 697 (878)
|||+++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+||
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NI 181 (314)
T 2ivs_A 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNI 181 (314)
T ss_dssp EECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred EeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheE
Confidence 999999999999976432 3489999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHH
Q 002809 698 LLNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEK 776 (878)
Q Consensus 698 Ll~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~ 776 (878)
|++.++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||+++||++ |+.||........
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 261 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999999999987644333222334457788999999999899999999999999999999 9999987665432
Q ss_pred HHHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 777 IHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 777 ~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
. ..+..+... ..+......+.+++.+||+.+|++||+++|+++.|++++..
T Consensus 262 ~-------~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 262 F-------NLLKTGHRM---------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp H-------HHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H-------HHhhcCCcC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 1 112222111 11122334788999999999999999999999999998753
No 45
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.2e-38 Score=350.47 Aligned_cols=244 Identities=25% Similarity=0.436 Sum_probs=204.0
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 96 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence 345689999999999999973 588999998754 4455678899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 168 (328)
T 3fe3_A 97 SGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG--- 168 (328)
T ss_dssp TTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC---
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC---
Confidence 99999999976 45699999999999999999999998 99999999999999999999999999998664322
Q ss_pred ccccccCCCCccCccccccCCCC-CccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLT-EKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t-~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
.....+||+.|+|||++.+..+. .++||||+||+++||++|+.||...+..+.. ..+..+.. .+
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-------~~i~~~~~------~~-- 233 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-------ERVLRGKY------RI-- 233 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHCCC------CC--
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhCCC------CC--
Confidence 23456799999999999988765 7999999999999999999999876643311 11222221 11
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+......+.+++.+||+.||++|||++|+++.
T Consensus 234 --p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 --PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp --CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred --CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11123467799999999999999999999874
No 46
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=8.2e-39 Score=342.65 Aligned_cols=250 Identities=28% Similarity=0.486 Sum_probs=195.4
Q ss_pred hhcccccccccEEEEEEEEcceeEEEEEeccCCh----hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSA----QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~----~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+|+..+..||||++..... ...+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 10 TLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 4568999999999999999999999999875432 235678999999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC--------CCcEEEeecCCcccc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE--------KLQAKLADFGLSKSF 716 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~--------~~~~kL~DFGla~~~ 716 (878)
+++|.+++. ...+++..++.++.|+++||+|||++...+|+||||||+|||++. ++.+||+|||+++..
T Consensus 90 ~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~ 166 (271)
T 3dtc_A 90 GGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW 166 (271)
T ss_dssp TEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----
T ss_pred CCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccc
Confidence 999999986 457999999999999999999999983233999999999999986 778999999999765
Q ss_pred ccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccccc
Q 002809 717 ATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIV 796 (878)
Q Consensus 717 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ii 796 (878)
.... .....|++.|+|||.+.+..++.++||||||++++||++|+.||.......... .. .....
T Consensus 167 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------~~-~~~~~---- 231 (271)
T 3dtc_A 167 HRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY------GV-AMNKL---- 231 (271)
T ss_dssp -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH------HH-HTSCC----
T ss_pred cccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------hh-hcCCC----
Confidence 4322 123468999999999999999999999999999999999999998765433211 11 11111
Q ss_pred CCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002809 797 DPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSEC 840 (878)
Q Consensus 797 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~ 840 (878)
....+......+.+++.+||+.+|++||+++|+++.|+++
T Consensus 232 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 232 ----ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1111223335788999999999999999999999999853
No 47
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1e-38 Score=341.22 Aligned_cols=248 Identities=22% Similarity=0.376 Sum_probs=205.6
Q ss_pred hhcccccccccEEEEEEEEcceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCC--CcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLNEIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDED--NQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+|+..+..||||++... .....+.|.+|+.++++++||||+++++++... ...++||||++
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 13 NFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 45689999999999999999999999999765 344567899999999999999999999999876 78899999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPP--IVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+|+|.+++.......+++..++.++.|+++||+|||+. + |+||||||+|||++.++.++|+|||+......
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~---- 165 (271)
T 3kmu_A 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS---- 165 (271)
T ss_dssp TCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC----
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc----
Confidence 99999999875555799999999999999999999987 6 99999999999999999999999998754321
Q ss_pred cccccccCCCCccCccccccCCCCC---ccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTE---KSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~---ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
....||+.|+|||.+.+...+. ++|||||||++|||++|+.||......... ......+.. +.
T Consensus 166 ---~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~~~~~~~~-----~~ 231 (271)
T 3kmu_A 166 ---PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG------MKVALEGLR-----PT 231 (271)
T ss_dssp ---TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH------HHHHHSCCC-----CC
T ss_pred ---cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH------HHHHhcCCC-----CC
Confidence 2245889999999998765544 799999999999999999999876653321 111111111 11
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECL 841 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~ 841 (878)
.+......+.+++.+||+.+|++||+++|+++.|+++.
T Consensus 232 ----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 232 ----IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 11223346889999999999999999999999999864
No 48
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1e-38 Score=341.61 Aligned_cols=253 Identities=24% Similarity=0.444 Sum_probs=208.2
Q ss_pred hhhcccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCC
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANG 646 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 646 (878)
+.+.+.||+|+||.||+++..+ ..||+|++...... .+++.+|++++.+++||||+++++++..++..++||||++++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (268)
T 3sxs_A 10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNG 88 (268)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred eeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCC
Confidence 3456899999999999999877 68999999765433 467999999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcccc
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVST 726 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 726 (878)
+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....... .....
T Consensus 89 ~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~~ 163 (268)
T 3sxs_A 89 CLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVSSV 163 (268)
T ss_dssp BHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEECC
T ss_pred cHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhh-hhccc
Confidence 999999753 44699999999999999999999998 99999999999999999999999999998664332 12223
Q ss_pred cccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccC
Q 002809 727 VVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFD 805 (878)
Q Consensus 727 ~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~ 805 (878)
...++..|+|||.+.+..++.++||||||++++||++ |+.||.......... . +..+. .... +
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~------~-~~~~~--~~~~-------~ 227 (268)
T 3sxs_A 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL------K-VSQGH--RLYR-------P 227 (268)
T ss_dssp SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH------H-HHTTC--CCCC-------C
T ss_pred CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH------H-HHcCC--CCCC-------C
Confidence 3446678999999999899999999999999999999 999998766543211 1 11111 0011 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 002809 806 ANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLA 842 (878)
Q Consensus 806 ~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~ 842 (878)
......+.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 1122467899999999999999999999999988654
No 49
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1e-38 Score=347.22 Aligned_cols=257 Identities=25% Similarity=0.408 Sum_probs=205.2
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC---ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS---SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+++.. +..||+|++... .....+.+.+|+.++.+++||||+++++++..++..++||||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 92 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEY 92 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeC
Confidence 355689999999999999875 488999998643 334567899999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++|+|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 93 ~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 166 (294)
T 4eqm_A 93 IEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL- 166 (294)
T ss_dssp CCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred CCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc-
Confidence 999999999976 45799999999999999999999998 999999999999999999999999999987643221
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ....... ... ....
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~------~~~~~~~-~~~-----~~~~ 234 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI------AIKHIQD-SVP-----NVTT 234 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH------HHHHHSS-CCC-----CHHH
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHhhc-cCC-----Ccch
Confidence 222345699999999999999999999999999999999999999987664331 1111111 111 1111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRP-TMSQVVMELSECLA 842 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-sm~evl~~L~~~~~ 842 (878)
.........+.+++.+|++.+|++|| +++++.+.|++++.
T Consensus 235 ~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 235 DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 12223345788999999999999998 89999999987653
No 50
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6.2e-39 Score=374.68 Aligned_cols=253 Identities=28% Similarity=0.458 Sum_probs=211.5
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+|++. +..||||++..... ..+.|.+|+++|++++||||++++++|...+..++||||+++
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~ 300 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 300 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCC
Confidence 356789999999999999987 47899999976543 357899999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
|+|.++++......+++..++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 301 g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~ 376 (495)
T 1opk_A 301 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAH 376 (495)
T ss_dssp CBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-EECC
T ss_pred CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc-eeec
Confidence 9999999876667799999999999999999999998 99999999999999999999999999998764322 1122
Q ss_pred ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccccc
Q 002809 726 TVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDF 804 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~ 804 (878)
....++..|+|||++.+..++.++|||||||++|||+| |+.||......+. .+ .+..+. ....
T Consensus 377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~---~~----~~~~~~---------~~~~ 440 (495)
T 1opk_A 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YE----LLEKDY---------RMER 440 (495)
T ss_dssp TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---HH----HHHTTC---------CCCC
T ss_pred CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH---HH----HHHcCC---------CCCC
Confidence 23446788999999999999999999999999999999 9999987664431 11 111111 1112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002809 805 DANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECL 841 (878)
Q Consensus 805 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~ 841 (878)
+..+...+.+++.+||+.+|++||++++|++.|+++.
T Consensus 441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 2233457889999999999999999999999998754
No 51
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.5e-39 Score=371.94 Aligned_cols=251 Identities=26% Similarity=0.439 Sum_probs=207.9
Q ss_pred hhcccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCC
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
.+.+.||+|+||.||+|+..+ ..||||++.... ...+.|.+|+++|++++||||+++++++. .+..++||||+++|+
T Consensus 191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~ 268 (454)
T 1qcf_A 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGS 268 (454)
T ss_dssp EEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCB
T ss_pred EEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCc
Confidence 567899999999999999875 889999998654 34678999999999999999999999987 567899999999999
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccccc
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTV 727 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 727 (878)
|.++++......+++..++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 269 L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~~~~~~ 344 (454)
T 1qcf_A 269 LLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREG 344 (454)
T ss_dssp HHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-HHTTCS
T ss_pred HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-eeccCC
Confidence 99999865555789999999999999999999998 99999999999999999999999999998753221 111223
Q ss_pred ccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 728 VAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 728 ~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
..++..|+|||++....++.++|||||||++|||+| |+.||......+.. + .+..+.. ...+.
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~---~----~i~~~~~---------~~~~~ 408 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI---R----ALERGYR---------MPRPE 408 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---H----HHHHTCC---------CCCCT
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH---H----HHHcCCC---------CCCCC
Confidence 346778999999998999999999999999999999 99999876654321 1 1112210 01122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVMELSECL 841 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~ 841 (878)
.+...+.+++.+||+.+|++||++++|++.|+++.
T Consensus 409 ~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 409 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 33457889999999999999999999999998754
No 52
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=5.1e-38 Score=341.07 Aligned_cols=263 Identities=15% Similarity=0.213 Sum_probs=210.0
Q ss_pred hhhcccccccccEEEEEEEE--cceeEEEEEeccCChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEeeecc
Q 002809 568 NNFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
+.+.+.||+|+||.||+|+. .++.||||++..... .+.+.+|+.++.++ +|+|++++++++..+...++||||+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 88 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL- 88 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence 34568999999999999995 458999999875432 35688999999999 7999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc-----EEEeecCCccccccC
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ-----AKLADFGLSKSFATD 719 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~-----~kL~DFGla~~~~~~ 719 (878)
+++|.+++... +..+++..++.++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 89 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 89 GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 99999999753 34699999999999999999999998 9999999999999987776 999999999876543
Q ss_pred CCC-----cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccc
Q 002809 720 ANT-----HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKS 794 (878)
Q Consensus 720 ~~~-----~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ 794 (878)
... .......||+.|+|||.+.+..++.++|||||||+++||++|+.||..............+..........+
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 244 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH
Confidence 221 123345699999999999999999999999999999999999999987543222222111111111111111
Q ss_pred ccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 002809 795 IVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMA 846 (878)
Q Consensus 795 iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~ 846 (878)
. .......+.+++.+||+.+|++||++++|++.|++++.....
T Consensus 245 ~---------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 245 L---------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp H---------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred H---------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 1 112234788999999999999999999999999998865443
No 53
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.2e-38 Score=343.22 Aligned_cols=258 Identities=26% Similarity=0.407 Sum_probs=200.4
Q ss_pred hhhcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHH--hcccceeeeeecccC----CCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMR--VHHRNLTSLVGHCDE----DNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~--l~H~nIv~l~g~~~~----~~~~~lV~E 641 (878)
+.+.+.||+|+||.||+|+.+++.||||++... ..+.+.+|.+++.. ++||||+++++++.. ....++|||
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 86 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITH 86 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeeccCCCcEEEEEEECCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehh
Confidence 345689999999999999999999999998654 33556677777777 789999999998643 356889999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCccEEEcCCCcEEEeecCCc
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLH--------NGCKPPIVHRDVKSTNILLNEKLQAKLADFGLS 713 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla 713 (878)
|+++|+|.++++. ..+++..++.++.|+++||+||| +. +|+||||||+|||++.++.+||+|||++
T Consensus 87 ~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 87 YHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp CCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred hccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 9999999999963 46999999999999999999999 66 9999999999999999999999999999
Q ss_pred cccccCCCCc--ccccccCCCCccCccccccC------CCCCccchhhHHHHHHHHHhC----------CCCCCCCChHH
Q 002809 714 KSFATDANTH--VSTVVAGTPGYLDPEYYTSN------RLTEKSDVYSFGVVILEIITC----------KPAISRINEEE 775 (878)
Q Consensus 714 ~~~~~~~~~~--~~~~~~gt~~Y~APE~~~~~------~~t~ksDV~S~Gvvl~elltG----------~~p~~~~~~~~ 775 (878)
+......... ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 7664332211 12234699999999999876 455799999999999999999 88886543211
Q ss_pred HHHHHHHHHHHHhcCCcccccCCcccc-ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002809 776 KIHIRQWVNSLIAKGDIKSIVDPRLQE-DFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSEC 840 (878)
Q Consensus 776 ~~~l~~~v~~~~~~~~~~~iid~~l~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~ 840 (878)
. .... ......... ..+.+.. .........+.+++.+||+.+|++|||++||++.|+++
T Consensus 241 ~-~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 P-SFED-MRKVVCVDQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp C-CHHH-HHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred c-chhh-hhHHHhccC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 0111 111111111 1111111 12345667899999999999999999999999999874
No 54
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.2e-38 Score=350.78 Aligned_cols=262 Identities=29% Similarity=0.422 Sum_probs=197.0
Q ss_pred hhhcccccccccEEEEEEEEcce-----eEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcc----
Q 002809 568 NNFERTLGKGGFGTVYYGRLNEI-----DVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQT---- 636 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~~-----~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~---- 636 (878)
+.+.+.||+|+||.||+|+.... .||||++... .....+.+.+|++++++++||||+++++++......
T Consensus 25 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (323)
T 3qup_A 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLP 104 (323)
T ss_dssp CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------
T ss_pred eEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCC
Confidence 45678999999999999987542 7999999764 344568899999999999999999999999777655
Q ss_pred --eeEeeeccCCChhhhhcccc----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeec
Q 002809 637 --ALIYEFMANGNLQEYLSDIS----KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADF 710 (878)
Q Consensus 637 --~lV~Ey~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DF 710 (878)
++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 105 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred ccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeec
Confidence 89999999999999996532 22599999999999999999999998 9999999999999999999999999
Q ss_pred CCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhc
Q 002809 711 GLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAK 789 (878)
Q Consensus 711 Gla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~ 789 (878)
|+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+... .. ..
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~------~~-~~ 254 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN------YL-IG 254 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH------HH-HT
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHH------HH-hc
Confidence 99987644333333334457789999999999999999999999999999999 999998766543211 11 11
Q ss_pred CCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002809 790 GDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARA 848 (878)
Q Consensus 790 ~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~ 848 (878)
+... ..+......+.+++.+||+.+|++||++.++++.|++++.......
T Consensus 255 ~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 255 GNRL---------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp TCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred CCCC---------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 1110 1112233478899999999999999999999999999886544333
No 55
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=353.48 Aligned_cols=246 Identities=21% Similarity=0.343 Sum_probs=195.0
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~ 91 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCP 91 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 345689999999999999874 5889999987653 2345678999999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHV 724 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 724 (878)
+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++........ ..
T Consensus 92 gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~-~~ 165 (347)
T 3zgw_A 92 GGELFDYIIS--QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD-YH 165 (347)
T ss_dssp TCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC-cc
Confidence 9999999975 45699999999999999999999998 999999999999999999999999999876533221 22
Q ss_pred cccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 725 STVVAGTPGYLDPEYYTSNRL-TEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 725 ~~~~~gt~~Y~APE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
....+||+.|+|||++.+..+ +.++||||+||+++||++|+.||...+..... ..+..+.. .+
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~-------~~i~~~~~------~~--- 229 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY-------KKIMRGKY------DV--- 229 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHTCC------CC---
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-------HHHHcCCC------CC---
Confidence 334579999999999988775 88999999999999999999999876543311 11122221 01
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+......+.+++.+||+.||++|||++|+++.
T Consensus 230 -p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 -PKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 11122356789999999999999999999875
No 56
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.7e-38 Score=342.77 Aligned_cols=257 Identities=26% Similarity=0.377 Sum_probs=199.3
Q ss_pred hhhcccccccccEEEEEEEEcc-----eeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-----IDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-----~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
+.+.+.||+|+||.||+|+... ..||+|++... .....+.+.+|+.++++++||||+++++++. ++..++|||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 95 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIME 95 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEe
Confidence 4567899999999999998742 46999998764 3445678999999999999999999999985 457899999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 96 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 96 LCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp CCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 99999999999752 44699999999999999999999998 999999999999999999999999999987643221
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
.......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.. . .+..+...
T Consensus 172 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~---~----~i~~~~~~------- 236 (281)
T 1mp8_A 172 -YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI---G----RIENGERL------- 236 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH---H----HHHTTCCC-------
T ss_pred -cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH---H----HHHcCCCC-------
Confidence 12223456789999999998899999999999999999997 99999876554321 1 11111111
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMA 846 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~ 846 (878)
..+......+.+++.+||+.+|++||++.|+++.|++++..+..
T Consensus 237 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 280 (281)
T 1mp8_A 237 --PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 280 (281)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 11222335688999999999999999999999999999887653
No 57
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=8.7e-39 Score=345.61 Aligned_cols=258 Identities=28% Similarity=0.445 Sum_probs=214.9
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+|+... ..||+|++.... ...+.+.+|++++++++||||+++++++..++..++||||+++
T Consensus 15 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 93 (288)
T 3kfa_A 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 93 (288)
T ss_dssp EEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred eeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCC
Confidence 3556899999999999999874 789999997643 3457899999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
++|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ....
T Consensus 94 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~ 169 (288)
T 3kfa_A 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAH 169 (288)
T ss_dssp EEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-SEEE
T ss_pred CcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc-cccc
Confidence 9999999876677799999999999999999999998 99999999999999999999999999998764332 2223
Q ss_pred ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccccc
Q 002809 726 TVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDF 804 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~ 804 (878)
....+++.|+|||.+.+..++.++||||||++++||++ |+.||.......... . +.... ....
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~---~----~~~~~---------~~~~ 233 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE---L----LEKDY---------RMER 233 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH---H----HHTTC---------CCCC
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH---H----HhccC---------CCCC
Confidence 34457889999999999999999999999999999999 999998765443211 1 11111 1111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 002809 805 DANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMA 846 (878)
Q Consensus 805 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~ 846 (878)
+......+.+++.+||+.+|++||+++|+++.|+++......
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~ 275 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 122335788999999999999999999999999998866443
No 58
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-38 Score=352.19 Aligned_cols=260 Identities=28% Similarity=0.438 Sum_probs=211.6
Q ss_pred hhhcccccccccEEEEEEEEcc-------eeEEEEEeccCC-hhhHHHHHHHHHHHHHh-cccceeeeeecccCCCccee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-------IDVAVKMLSSSS-AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-------~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~l 638 (878)
+.+.+.||+|+||.||+|+..+ ..||+|++.... ....+.+.+|++++.++ +||||+++++++..++..++
T Consensus 48 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 127 (333)
T 2i1m_A 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 127 (333)
T ss_dssp EEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEE
Confidence 3456899999999999998743 369999997653 34567899999999999 89999999999999999999
Q ss_pred EeeeccCCChhhhhcccc------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEE
Q 002809 639 IYEFMANGNLQEYLSDIS------------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAK 706 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~k 706 (878)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 128 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~k 204 (333)
T 2i1m_A 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAK 204 (333)
T ss_dssp EEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEE
T ss_pred EEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEE
Confidence 999999999999997532 34589999999999999999999998 999999999999999999999
Q ss_pred EeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHH
Q 002809 707 LADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNS 785 (878)
Q Consensus 707 L~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~ 785 (878)
|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||+| |..||........ +..
T Consensus 205 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~~~---- 278 (333)
T 2i1m_A 205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--FYK---- 278 (333)
T ss_dssp BCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--HHH----
T ss_pred ECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--HHH----
Confidence 999999987654433333334557889999999999899999999999999999999 9999987553321 111
Q ss_pred HHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 786 LIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 786 ~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
....+... ..+......+.+++.+||+.+|++||+++||++.|+++...+.
T Consensus 279 ~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 279 LVKDGYQM---------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp HHHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCC---------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence 11111100 0111123467899999999999999999999999999876644
No 59
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.8e-38 Score=346.89 Aligned_cols=270 Identities=15% Similarity=0.214 Sum_probs=213.9
Q ss_pred hhcccccccccEEEEEEEE--cceeEEEEEeccCChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
.+.+.||+|+||.||+|+. .++.||||++..... .+.+.+|+++++++ +||||+++++++..++..++||||+ +
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (330)
T 2izr_A 12 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-G 88 (330)
T ss_dssp EEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-C
Confidence 4568999999999999996 458899999875533 34688999999999 8999999999999999999999999 9
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc-----EEEeecCCccccccCC
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ-----AKLADFGLSKSFATDA 720 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~-----~kL~DFGla~~~~~~~ 720 (878)
++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.+....
T Consensus 89 ~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 89 PSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp CBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 9999999753 45799999999999999999999998 9999999999999999887 9999999998764332
Q ss_pred CCc-----ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccc
Q 002809 721 NTH-----VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSI 795 (878)
Q Consensus 721 ~~~-----~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~i 795 (878)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+...........
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~- 243 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEV- 243 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHH-
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHH-
Confidence 211 12356799999999999999999999999999999999999999987543322222111111111100000
Q ss_pred cCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCCcC
Q 002809 796 VDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARANSGRGFH 855 (878)
Q Consensus 796 id~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~~~~~~~~ 855 (878)
...... ++.+++..|++.+|.+||++++|++.|+++.............+.
T Consensus 244 --------~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 294 (330)
T 2izr_A 244 --------LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI 294 (330)
T ss_dssp --------HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTT
T ss_pred --------HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCC
Confidence 001112 788999999999999999999999999998877655554444444
No 60
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-38 Score=338.79 Aligned_cols=261 Identities=23% Similarity=0.421 Sum_probs=213.9
Q ss_pred ccccccccEEEEEEEEc----ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCC
Q 002809 572 RTLGKGGFGTVYYGRLN----EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANG 646 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~----~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 646 (878)
+.||+|+||.||+|+.. +..||||++.... ....+.+.+|++++.+++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 48999999999999863 4779999998753 44567899999999999999999999999 456789999999999
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC-ccc
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT-HVS 725 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~ 725 (878)
+|.+++.. ....+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 95 ~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 170 (287)
T 1u59_A 95 PLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170 (287)
T ss_dssp EHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCC
T ss_pred CHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeecc
Confidence 99999964 345699999999999999999999998 9999999999999999999999999999876433221 112
Q ss_pred ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccccc
Q 002809 726 TVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDF 804 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~ 804 (878)
....+++.|+|||++.+..++.++||||||++++||++ |+.||......+. .. .+..+... ..
T Consensus 171 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~----~i~~~~~~---------~~ 234 (287)
T 1u59_A 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV---MA----FIEQGKRM---------EC 234 (287)
T ss_dssp CSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH---HH----HHHTTCCC---------CC
T ss_pred ccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH---HH----HHhcCCcC---------CC
Confidence 23446889999999998889999999999999999999 9999987654331 11 12222111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Q 002809 805 DANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARANSGRG 853 (878)
Q Consensus 805 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~~~~~~ 853 (878)
+......+.+++.+||+.+|++||++.++++.|+++..+.......++.
T Consensus 235 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~~~ 283 (287)
T 1u59_A 235 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHH 283 (287)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCCcc
Confidence 2233457889999999999999999999999999999888777765554
No 61
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=341.17 Aligned_cols=268 Identities=22% Similarity=0.315 Sum_probs=209.5
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCC--cceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN--QTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~--~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence 345689999999999999986 4889999997543 334577889999999999999999999987655 77999999
Q ss_pred ccCCChhhhhcccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE----cCCCcEEEeecCCccccc
Q 002809 643 MANGNLQEYLSDIS-KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL----NEKLQAKLADFGLSKSFA 717 (878)
Q Consensus 643 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl----~~~~~~kL~DFGla~~~~ 717 (878)
+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp CTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 99999999997643 23499999999999999999999998 99999999999999 788889999999998764
Q ss_pred cCCCCcccccccCCCCccCccccc--------cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhc
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYT--------SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAK 789 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~--------~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~ 789 (878)
.... .....||..|+|||++. +..++.++|||||||++|||++|+.||......... .+.+......
T Consensus 168 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~ 242 (319)
T 4euu_A 168 DDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKIITG 242 (319)
T ss_dssp TTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC--HHHHHHHHHH
T ss_pred CCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh--HHHHHHHhcC
Confidence 3321 22356999999999986 567899999999999999999999999754432211 1111122211
Q ss_pred C---Cccccc---------CCccc--cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 790 G---DIKSIV---------DPRLQ--EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 790 ~---~~~~ii---------d~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
. .+..+. .+.+. ..........+.+++.+||+.||++||+++|+++...+....
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 1 111110 01111 123456677888999999999999999999999999875533
No 62
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.7e-38 Score=340.02 Aligned_cols=253 Identities=21% Similarity=0.404 Sum_probs=202.7
Q ss_pred hhhcccccccccEEEEEEEEcc---------eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCccee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE---------IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~---------~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l 638 (878)
+.+.+.||+|+||.||+|+... ..||+|++........+.+.+|++++.+++||||+++++++..++..++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (289)
T 4fvq_A 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENIL 89 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEE
T ss_pred eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEE
Confidence 3556899999999999998754 4699999987766677889999999999999999999999999999999
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc--------EEEeec
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ--------AKLADF 710 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~--------~kL~DF 710 (878)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 90 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 90 VQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 99999999999999763 34599999999999999999999998 9999999999999998887 999999
Q ss_pred CCccccccCCCCcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHHHHHh
Q 002809 711 GLSKSFATDANTHVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCK-PAISRINEEEKIHIRQWVNSLIA 788 (878)
Q Consensus 711 Gla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~-~p~~~~~~~~~~~l~~~v~~~~~ 788 (878)
|++..... .....|+..|+|||++.+ ..++.++|||||||++|||++|. +|+........... . ..
T Consensus 166 g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~---~---~~ 233 (289)
T 4fvq_A 166 GISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF---Y---ED 233 (289)
T ss_dssp CSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH---H---HT
T ss_pred cccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHH---h---hc
Confidence 99865422 123457899999999987 67899999999999999999954 55555443321111 1 11
Q ss_pred cCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002809 789 KGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARA 848 (878)
Q Consensus 789 ~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~ 848 (878)
........ ..++.+++.+||+.+|++||+++|+++.|++++..+....
T Consensus 234 ~~~~~~~~------------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~ 281 (289)
T 4fvq_A 234 RHQLPAPK------------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281 (289)
T ss_dssp TCCCCCCS------------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-------
T ss_pred cCCCCCCC------------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCC
Confidence 11111111 1246789999999999999999999999999887655544
No 63
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.5e-38 Score=348.34 Aligned_cols=258 Identities=29% Similarity=0.479 Sum_probs=211.4
Q ss_pred hhhcccccccccEEEEEEEEc---------ceeEEEEEeccCC-hhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcc
Q 002809 568 NNFERTLGKGGFGTVYYGRLN---------EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQT 636 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~---------~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~ 636 (878)
+.+.+.||+|+||.||+|+.. +..||||++.... ....+.+.+|++++.++ +||||+++++++...+..
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 116 (334)
T 2pvf_A 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 116 (334)
T ss_dssp EEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCC
T ss_pred eEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCce
Confidence 456789999999999999863 3579999997653 44567899999999999 899999999999999999
Q ss_pred eeEeeeccCCChhhhhcccc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC
Q 002809 637 ALIYEFMANGNLQEYLSDIS--------------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK 702 (878)
Q Consensus 637 ~lV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~ 702 (878)
++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.+
T Consensus 117 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193 (334)
T ss_dssp EEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred EEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcCC
Confidence 99999999999999997643 13489999999999999999999998 99999999999999999
Q ss_pred CcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 002809 703 LQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQ 781 (878)
Q Consensus 703 ~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~ 781 (878)
+.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |+.||......+..
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---- 269 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---- 269 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH----
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH----
Confidence 9999999999987644332222333457789999999998889999999999999999999 99999876543321
Q ss_pred HHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 782 WVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 782 ~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
..+..+... ..+......+.+++.+||+.+|++||+++|+++.|++++...
T Consensus 270 ---~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 270 ---KLLKEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp ---HHHHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---HHHhcCCCC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 111222111 111223346889999999999999999999999999988653
No 64
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.8e-38 Score=350.32 Aligned_cols=249 Identities=24% Similarity=0.387 Sum_probs=201.1
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCCh-hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA-QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
.+.+.||+|+||.||+++.. ++.||||++..... ...+.+.+|+.++++++||||+++++++..++..++||||+++
T Consensus 10 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~ 89 (323)
T 3tki_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89 (323)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCC
Confidence 45689999999999999876 48899999875432 3346789999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
|+|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.........
T Consensus 90 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 164 (323)
T 3tki_A 90 GELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (323)
T ss_dssp EEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred CcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence 999999975 55699999999999999999999998 9999999999999999999999999999876443333333
Q ss_pred ccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccccc
Q 002809 726 TVVAGTPGYLDPEYYTSNRL-TEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDF 804 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~ 804 (878)
....||+.|+|||++.+..+ +.++|||||||+++||++|+.||........ ....|.. ... ... .
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~----~~~---~~~------~ 230 (323)
T 3tki_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKE----KKT---YLN------P 230 (323)
T ss_dssp CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHHT----TCT---TST------T
T ss_pred CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHhc----ccc---cCC------c
Confidence 45679999999999987765 7799999999999999999999987554321 1222211 110 000 0
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 805 DANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 805 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.......+.+++.+||+.+|++|||++|+++.
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11223467789999999999999999999874
No 65
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.5e-38 Score=337.36 Aligned_cols=254 Identities=28% Similarity=0.430 Sum_probs=208.2
Q ss_pred hhhcccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCC
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANG 646 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 646 (878)
+.+.+.||+|+||.||+|+..+ ..||||++..... ..+.+.+|++++++++||||+++++++.. +..++||||++++
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~ 92 (279)
T 1qpc_A 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 92 (279)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTC
T ss_pred hhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCC
Confidence 3556899999999999999876 7899999976532 35789999999999999999999999864 5689999999999
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcccc
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVST 726 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 726 (878)
+|.+++.......+++..++.++.|+++||+|||+. +|+||||||+||++++++.+||+|||++....... .....
T Consensus 93 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 168 (279)
T 1qpc_A 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTARE 168 (279)
T ss_dssp BHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EECCT
T ss_pred CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-ccccc
Confidence 999999764445799999999999999999999998 99999999999999999999999999998764322 11222
Q ss_pred cccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccC
Q 002809 727 VVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFD 805 (878)
Q Consensus 727 ~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~ 805 (878)
...++..|+|||.+.+..++.++||||||++++||++ |+.||......+.. ..+..+.. . ..+
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-------~~~~~~~~-----~----~~~ 232 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------QNLERGYR-----M----VRP 232 (279)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-------HHHHTTCC-----C----CCC
T ss_pred CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH-------HHHhcccC-----C----CCc
Confidence 3456789999999998889999999999999999999 99999876543311 11111110 0 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 806 ANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 806 ~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
......+.+++.+|++.+|++||+++++++.|+++...
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 12234788999999999999999999999999998754
No 66
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.4e-38 Score=345.24 Aligned_cols=263 Identities=25% Similarity=0.426 Sum_probs=213.5
Q ss_pred hhhcccccccccEEEEEEEEc-------ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLN-------EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV 639 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 106 (322)
T 1p4o_A 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 106 (322)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEE
Confidence 455789999999999999765 3679999997653 34556799999999999999999999999999999999
Q ss_pred eeeccCCChhhhhcccc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecC
Q 002809 640 YEFMANGNLQEYLSDIS--------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFG 711 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFG 711 (878)
|||+++|+|.+++.... ...+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECcCc
Confidence 99999999999997532 14579999999999999999999998 99999999999999999999999999
Q ss_pred CccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcC
Q 002809 712 LSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKG 790 (878)
Q Consensus 712 la~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~ 790 (878)
+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......... ..+..+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-------~~~~~~ 256 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL-------RFVMEG 256 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH-------HHHHTT
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHH-------HHHHcC
Confidence 9986644332223334457889999999999999999999999999999999 89999876543311 112222
Q ss_pred CcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhcC
Q 002809 791 DIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARAN 849 (878)
Q Consensus 791 ~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~~ 849 (878)
.... .+......+.+++.+||+.+|++||++.|+++.|++.+........
T Consensus 257 ~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~ 306 (322)
T 1p4o_A 257 GLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 306 (322)
T ss_dssp CCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHC
T ss_pred CcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcccc
Confidence 2111 1122334688999999999999999999999999987665444433
No 67
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.7e-38 Score=366.89 Aligned_cols=251 Identities=26% Similarity=0.431 Sum_probs=203.8
Q ss_pred hhcccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCC
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
.+.+.||+|+||.||+|++.+ ..||||++..... ..+.|.+|+++|++++||||+++++++.. +..++||||+++|+
T Consensus 187 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gs 264 (452)
T 1fmk_A 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 264 (452)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCB
T ss_pred eeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCC
Confidence 456899999999999999987 7799999986543 34789999999999999999999999876 67899999999999
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccccc
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTV 727 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 727 (878)
|.++++......+++..++.++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++...... ......
T Consensus 265 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~~~ 340 (452)
T 1fmk_A 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQG 340 (452)
T ss_dssp HHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc-eecccC
Confidence 99999865556799999999999999999999998 99999999999999999999999999998764322 112223
Q ss_pred ccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 728 VAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 728 ~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
..++..|+|||.+.+..++.++|||||||++|||++ |+.||......+.. ..+..+.. ...+.
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-------~~i~~~~~---------~~~~~ 404 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQVERGYR---------MPCPP 404 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-------HHHHTTCC---------CCCCT
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH-------HHHHcCCC---------CCCCC
Confidence 446789999999999999999999999999999999 99999876654321 11222211 11122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVMELSECL 841 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~ 841 (878)
.+...+.+++.+||+.+|++|||+++|++.|+++.
T Consensus 405 ~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 405 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 33457889999999999999999999999999865
No 68
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1e-37 Score=346.32 Aligned_cols=244 Identities=27% Similarity=0.383 Sum_probs=202.7
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccC---ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS---SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.||+|+||.||+++.. ++.||+|++.+. .......+.+|+.++.+++||||+++++++...+..++||||+
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~ 87 (337)
T 1o6l_A 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 87 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCC
Confidence 45689999999999999885 488999999754 2234567899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 88 ~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--~ 160 (337)
T 1o6l_A 88 NGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--A 160 (337)
T ss_dssp TTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--C
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC--C
Confidence 99999999975 45799999999999999999999998 99999999999999999999999999998643222 2
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||......... .. +..+.. .+
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~------~~-i~~~~~------~~--- 224 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF------EL-ILMEEI------RF--- 224 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HH-HHHCCC------CC---
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHH------HH-HHcCCC------CC---
Confidence 233467999999999999999999999999999999999999999876543311 11 111111 11
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRP-----TMSQVVME 836 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----sm~evl~~ 836 (878)
+.....++.+++.+||+.+|++|| +++|+++.
T Consensus 225 -p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 -PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 112234678999999999999999 89999874
No 69
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=9.8e-38 Score=338.27 Aligned_cols=257 Identities=30% Similarity=0.534 Sum_probs=195.5
Q ss_pred hhhcccccccccEEEEEEEEcceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLNEIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+|+..+ .||||++... .....+.|.+|++++++++||||+++++++ .....++||||+++
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~ 103 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEG 103 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCE
T ss_pred eeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCC
Confidence 3566899999999999998766 5999998754 344567899999999999999999999965 45568999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...........
T Consensus 104 ~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 104 SSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp EEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred CcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 9999999653 45699999999999999999999998 9999999999999999999999999999866433333333
Q ss_pred ccccCCCCccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 726 TVVAGTPGYLDPEYYT---SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
....||+.|+|||.+. +..++.++||||||++++||++|+.||......+. +. ..+..+.......
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~----~~~~~~~~~~~~~----- 248 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--II----EMVGRGSLSPDLS----- 248 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--HH----HHHHHTSCCCCTT-----
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--HH----HHhcccccCcchh-----
Confidence 4456999999999986 56788899999999999999999999987654321 11 2222222211111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECL 841 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~ 841 (878)
.........+.+++.+||+.+|++||+++|+++.|+++.
T Consensus 249 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 111233457889999999999999999999999999864
No 70
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=342.41 Aligned_cols=249 Identities=22% Similarity=0.381 Sum_probs=204.5
Q ss_pred HhhhcccccccccEEEEEEEEc--ceeEEEEEeccCChh------hHHHHHHHHHHHHHhcccceeeeeecccCCCccee
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQ------GFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l 638 (878)
.+.+.+.||+|+||.||+++.. +..||+|++...... ..+.+.+|++++.+++||||+++++++......++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4566789999999999999986 488999998754322 35789999999999999999999999999999999
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC----cEEEeecCCcc
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL----QAKLADFGLSK 714 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~----~~kL~DFGla~ 714 (878)
||||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 92 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 92 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999975 56799999999999999999999998 999999999999999887 89999999998
Q ss_pred ccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccc
Q 002809 715 SFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKS 794 (878)
Q Consensus 715 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ 794 (878)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... . +.....
T Consensus 167 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~------~-~~~~~~-- 234 (326)
T 2y0a_A 167 KIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------N-VSAVNY-- 234 (326)
T ss_dssp ECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH------H-HHHTCC--
T ss_pred ECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH------H-HHhcCC--
Confidence 764322 1233569999999999999999999999999999999999999998765433211 1 111110
Q ss_pred ccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 795 IVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 795 iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+...........+.+++.+||+.+|++|||++|+++.
T Consensus 235 ----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 235 ----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ----CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01101111223467899999999999999999999973
No 71
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.1e-38 Score=352.15 Aligned_cols=268 Identities=26% Similarity=0.380 Sum_probs=209.0
Q ss_pred hhhcccccccccEEEEEEEE------cceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeeccc--CCCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRL------NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCD--EDNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~------~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~--~~~~~~lV 639 (878)
+.+.+.||+|+||.||++++ .+..||||++........+.+.+|++++++++||||+++++++. .....++|
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 104 (327)
T 3lxl_A 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 104 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence 35568999999999999985 34789999998887777788999999999999999999999875 45668899
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
|||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 105 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 105 MEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 9999999999999753 34699999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCC-cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHH--------HHHHHHHHHhcC
Q 002809 720 ANT-HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIH--------IRQWVNSLIAKG 790 (878)
Q Consensus 720 ~~~-~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~--------l~~~v~~~~~~~ 790 (878)
... .......|+..|+|||++.+..++.++||||||++++||++|+.||.....+.... ....+......+
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 221 12233457888999999999899999999999999999999999987533221000 000011111111
Q ss_pred CcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002809 791 DIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARA 848 (878)
Q Consensus 791 ~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~ 848 (878)
.....+......+.+++.+||+.+|++||+++|+++.|+.+......-.
T Consensus 261 ---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 309 (327)
T 3lxl_A 261 ---------QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCE 309 (327)
T ss_dssp ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--------
T ss_pred ---------cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCcc
Confidence 1112223344578899999999999999999999999999876544333
No 72
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=347.87 Aligned_cols=254 Identities=26% Similarity=0.400 Sum_probs=199.4
Q ss_pred hhcccccccccEEEEEEEEcc--e----eEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 569 NFERTLGKGGFGTVYYGRLNE--I----DVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~--~----~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
.+.+.||+|+||.||+|+... . +||+|.+... .....+.+.+|+.++.+++||||+++++++..+. .++|+|
T Consensus 18 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~ 96 (327)
T 3lzb_A 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQ 96 (327)
T ss_dssp EEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEEC
T ss_pred eEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEE
Confidence 456899999999999998743 3 3678877543 3445678999999999999999999999998764 789999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 97 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 97 LMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred ecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 99999999999753 45699999999999999999999998 999999999999999999999999999987654433
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||......+... .+..+..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-------~~~~~~~-------- 237 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-------ILEKGER-------- 237 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-------HHHTTCC--------
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-------HHHcCCC--------
Confidence 333334557789999999999999999999999999999999 999998766543211 1111111
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
...+......+.+++.+||+.+|++||+++|+++.|+++...
T Consensus 238 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 238 -LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 011122334688999999999999999999999999998754
No 73
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.5e-38 Score=350.97 Aligned_cols=255 Identities=24% Similarity=0.379 Sum_probs=203.7
Q ss_pred hhcccccccccEEEEEEEEcc--e----eEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 569 NFERTLGKGGFGTVYYGRLNE--I----DVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~--~----~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
.+.+.||+|+||.||+|+... . +||+|.+.... ....+.+.+|+.++.+++||||+++++++. ++..++|||
T Consensus 16 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e 94 (325)
T 3kex_A 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQ 94 (325)
T ss_dssp EEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEE
T ss_pred eeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEE
Confidence 456789999999999998743 3 38888876443 334467889999999999999999999986 456899999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.+++... +..+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 95 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 95 YLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp CCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred eCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 99999999999753 45789999999999999999999998 999999999999999999999999999988755444
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
........|+..|+|||++.+..++.++|||||||++|||+| |+.||......+... .+..+....
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-------~~~~~~~~~------ 237 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD-------LLEKGERLA------ 237 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHH-------HHHTTCBCC------
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHH-------HHHcCCCCC------
Confidence 444455668889999999999999999999999999999999 999998765443211 112221100
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
.+......+.+++.+||+.+|++||+++|+++.|+++....
T Consensus 238 ---~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 238 ---QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp ---CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred ---CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 01111224668999999999999999999999999976543
No 74
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.8e-38 Score=335.70 Aligned_cols=253 Identities=26% Similarity=0.456 Sum_probs=207.9
Q ss_pred hhcccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCC
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
.+.+.||+|+||.||+++..+ ..||+|++...... .+.+.+|++++++++||||+++++++..++..++||||+++++
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (267)
T 3t9t_A 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC 89 (267)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCB
T ss_pred eeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCc
Confidence 456889999999999999855 78999999865433 3689999999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccccc
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTV 727 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 727 (878)
|.+++... ...+++..++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++...... ......
T Consensus 90 L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~ 164 (267)
T 3t9t_A 90 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTG 164 (267)
T ss_dssp HHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTTS
T ss_pred HHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc-cccccc
Confidence 99999753 45689999999999999999999998 99999999999999999999999999987653211 111223
Q ss_pred ccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 728 VAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 728 ~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
..++..|+|||.+.+..++.++||||||++++||++ |+.||......+.. . .+..+.. . ..+.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~------~-~i~~~~~--~-------~~~~ 228 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------E-DISTGFR--L-------YKPR 228 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------H-HHHTTCC--C-------CCCT
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHH------H-HHhcCCc--C-------CCCc
Confidence 456778999999998899999999999999999999 89999876543311 1 1111110 0 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
.....+.+++.+||+.+|++||+++|+++.|+++.+.
T Consensus 229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1234678999999999999999999999999998753
No 75
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.4e-38 Score=345.45 Aligned_cols=260 Identities=28% Similarity=0.443 Sum_probs=209.9
Q ss_pred hhhcccccccccEEEEEEEEc-------ceeEEEEEeccCC-hhhHHHHHHHHHHHHHh-cccceeeeeecccCCC-cce
Q 002809 568 NNFERTLGKGGFGTVYYGRLN-------EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDN-QTA 637 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~-~~~ 637 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++.++ +||||+++++++...+ ..+
T Consensus 29 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~ 108 (316)
T 2xir_A 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 108 (316)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCE
T ss_pred eeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceE
Confidence 345689999999999999852 3789999997653 34557899999999999 7999999999987654 589
Q ss_pred eEeeeccCCChhhhhccccC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC
Q 002809 638 LIYEFMANGNLQEYLSDISK--------------KVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL 703 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~ 703 (878)
+||||+++|+|.+++..... ..+++..++.++.|+++||.|||+. +|+||||||+||+++.++
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~ 185 (316)
T 2xir_A 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKN 185 (316)
T ss_dssp EEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCC
Confidence 99999999999999976432 2289999999999999999999998 999999999999999999
Q ss_pred cEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 002809 704 QAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQW 782 (878)
Q Consensus 704 ~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 782 (878)
.+||+|||+++...............|++.|+|||++.+..++.++||||||++++||+| |+.||........ +
T Consensus 186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~--- 260 (316)
T 2xir_A 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--F--- 260 (316)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH--H---
T ss_pred CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH--H---
Confidence 999999999987654433333344567889999999999999999999999999999998 9999977553221 1
Q ss_pred HHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 783 VNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 783 v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
...+..+.... .+......+.+++.+||+.+|++||+++|+++.|+++++...
T Consensus 261 -~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 261 -CRRLKEGTRMR---------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp -HHHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -HHHhccCccCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11112221111 111123467899999999999999999999999999987643
No 76
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.1e-38 Score=347.37 Aligned_cols=261 Identities=24% Similarity=0.379 Sum_probs=207.9
Q ss_pred hhcccccccccEEEEEEEE------cceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccC--CCcceeE
Q 002809 569 NFERTLGKGGFGTVYYGRL------NEIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDE--DNQTALI 639 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~------~~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--~~~~~lV 639 (878)
.+.+.||+|+||.||++++ .++.||||++.... ....+.+.+|++++++++||||+++++++.. ....++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 4568999999999998875 34789999998653 3456789999999999999999999999976 4567899
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 114 ~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp ECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999975 3499999999999999999999998 9999999999999999999999999999876443
Q ss_pred CCC-cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHH---------HHHHHHHHHHHhc
Q 002809 720 ANT-HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEK---------IHIRQWVNSLIAK 789 (878)
Q Consensus 720 ~~~-~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~---------~~l~~~v~~~~~~ 789 (878)
... .......++..|+|||.+.+..++.++||||||++++||++|+.||........ ..... ....+..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 266 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLER 266 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHH-HHHHHHT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHH-HHHHHhc
Confidence 221 122344578889999999998999999999999999999999999875332110 00111 1111111
Q ss_pred CCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 790 GDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 790 ~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
+ .....+......+.+++.+||+.+|++||+++|+++.|+++.+.-.
T Consensus 267 ~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 267 G---------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp T---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred c---------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 1 1112223334578899999999999999999999999999876543
No 77
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.3e-37 Score=348.75 Aligned_cols=247 Identities=24% Similarity=0.385 Sum_probs=203.8
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChh------hHHHHHHHHHHHHHhcccceeeeeecccCCCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQ------GFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV 639 (878)
+.+.+.||+|+||.||+++.. ++.||+|++...... ..+.+.+|+.++.+++||||+++++++......++|
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 93 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI 93 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEE
Confidence 456789999999999999986 488999999765322 347899999999999999999999999999999999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC----cEEEeecCCccc
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL----QAKLADFGLSKS 715 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~----~~kL~DFGla~~ 715 (878)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 94 ~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 94 LELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 999999999999975 55799999999999999999999998 999999999999998877 799999999987
Q ss_pred cccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccc
Q 002809 716 FATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSI 795 (878)
Q Consensus 716 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~i 795 (878)
..... ......||+.|+|||++.+..++.++|||||||++|||++|++||......+.. . .+..+...
T Consensus 169 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~------~-~i~~~~~~-- 236 (361)
T 2yab_A 169 IEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------A-NITAVSYD-- 236 (361)
T ss_dssp CCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------H-HHHTTCCC--
T ss_pred cCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH------H-HHHhcCCC--
Confidence 64322 223456999999999999999999999999999999999999999876554321 1 11111110
Q ss_pred cCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 796 VDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 796 id~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
+++... ......+.+++.+||..||++||+++|+++
T Consensus 237 ~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 FDEEFF----SQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCchhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111 112346789999999999999999999986
No 78
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=343.89 Aligned_cols=251 Identities=28% Similarity=0.501 Sum_probs=198.1
Q ss_pred hhcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCCh
Q 002809 569 NFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGNL 648 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 648 (878)
.+.+.||+|+||.||+++..++.||||++... ...+.|.+|++++++++||||+++++++.+ ..++||||+++|+|
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L 86 (307)
T 2eva_A 11 EVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSL 86 (307)
T ss_dssp EEEEEEECCSSSEEEEEEETTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBH
T ss_pred eeeeEeecCCCceEEEEEECCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCH
Confidence 45689999999999999999999999998754 345789999999999999999999999874 48999999999999
Q ss_pred hhhhccccC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc-EEEeecCCccccccCCCCcccc
Q 002809 649 QEYLSDISK-KVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ-AKLADFGLSKSFATDANTHVST 726 (878)
Q Consensus 649 ~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~-~kL~DFGla~~~~~~~~~~~~~ 726 (878)
.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||++...... ..
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-----~~ 161 (307)
T 2eva_A 87 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----MT 161 (307)
T ss_dssp HHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------------
T ss_pred HHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-----cc
Confidence 999976432 35789999999999999999999943348999999999999998886 799999998765322 12
Q ss_pred cccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 727 VVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 727 ~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
...|++.|+|||++.+..++.++||||||++++||++|+.||........ .+ .| . ...+... ....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~-~~--~-~~~~~~~-----~~~~---- 227 (307)
T 2eva_A 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-RI-MW--A-VHNGTRP-----PLIK---- 227 (307)
T ss_dssp ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH-HH-HH--H-HHTTCCC-----CCBT----
T ss_pred cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH-HH-HH--H-HhcCCCC-----Cccc----
Confidence 34589999999999999999999999999999999999999976543221 11 11 1 1111111 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLA 842 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~ 842 (878)
.....+.+++.+||+.+|++||+++++++.|+.+.+
T Consensus 228 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 228 NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 123467899999999999999999999999998753
No 79
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.6e-38 Score=338.56 Aligned_cols=250 Identities=29% Similarity=0.463 Sum_probs=201.1
Q ss_pred hhcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccC-CCcceeEeeeccCCC
Q 002809 569 NFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDE-DNQTALIYEFMANGN 647 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-~~~~~lV~Ey~~~gs 647 (878)
.+.+.||+|+||.||+++..++.||||++.... ..+.+.+|++++.+++||||+++++++.+ .+..++||||+++|+
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~ 101 (278)
T 1byg_A 24 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101 (278)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE
T ss_pred eEEeEEecCCCceEEEEEEcCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCC
Confidence 556899999999999999999999999997543 45789999999999999999999998654 457899999999999
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccccc
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTV 727 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 727 (878)
|.+++.......+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 102 L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-----~~~ 173 (278)
T 1byg_A 102 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----QDT 173 (278)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------------
T ss_pred HHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc-----ccC
Confidence 99999765445589999999999999999999998 9999999999999999999999999998755322 122
Q ss_pred ccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 728 VAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 728 ~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
..++..|+|||.+.+..++.++||||||++++||+| |+.||......+.. ..+..+.. . ..+.
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~-------~~~~~~~~-----~----~~~~ 237 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-------PRVEKGYK-----M----DAPD 237 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH-------HHHTTTCC-----C----CCCT
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH-------HHHhcCCC-----C----CCcc
Confidence 357889999999999999999999999999999998 99999876543311 11122211 1 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
.....+.+++.+||+.+|++||+++|+++.|+++...+
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 238 GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 23347889999999999999999999999999987654
No 80
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=6.9e-38 Score=351.32 Aligned_cols=278 Identities=18% Similarity=0.232 Sum_probs=210.7
Q ss_pred hhhcccccccccEEEEEEEEcc-------eeEEEEEeccCChhhH-----------HHHHHHHHHHHHhcccceeeeeec
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-------IDVAVKMLSSSSAQGF-----------QQFQAEVKLLMRVHHRNLTSLVGH 629 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-------~~vAvK~l~~~~~~~~-----------~~f~~Ei~~L~~l~H~nIv~l~g~ 629 (878)
+.+.+.||+|+||.||+|+... +.||||++........ ..+..|+..+..++||||++++++
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 4567899999999999998743 6799999876543211 223455666777789999999999
Q ss_pred ccCC----CcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEc--CCC
Q 002809 630 CDED----NQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLN--EKL 703 (878)
Q Consensus 630 ~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~--~~~ 703 (878)
+... ...++||||+ +++|.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||++ .++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTT
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCC
Confidence 8664 4589999999 9999999976 346799999999999999999999998 999999999999999 889
Q ss_pred cEEEeecCCccccccCCCC-----cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHH
Q 002809 704 QAKLADFGLSKSFATDANT-----HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIH 778 (878)
Q Consensus 704 ~~kL~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~ 778 (878)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~-- 269 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK-- 269 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH--
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH--
Confidence 9999999999876432211 111334599999999999999999999999999999999999999986433221
Q ss_pred HHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCCcCC
Q 002809 779 IRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARANSGRGFHS 856 (878)
Q Consensus 779 l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~~~~~~~~~ 856 (878)
...+...... ..+.+++++.+.. .....++.+++..|++.+|++||++++|++.|++++............+..
T Consensus 270 ~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~ 343 (364)
T 3op5_A 270 YVRDSKIRYR-ENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSV 343 (364)
T ss_dssp HHHHHHHHHH-HCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC--
T ss_pred HHHHHHHHhh-hhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccceEe
Confidence 1111111111 1223333332221 112346789999999999999999999999999999876666655555543
No 81
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8.2e-38 Score=337.15 Aligned_cols=255 Identities=27% Similarity=0.415 Sum_probs=205.0
Q ss_pred hhcccccccccEEEEEEEEcc-----eeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-----IDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-----~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
.+.+.||+|+||.||+|+..+ ..||+|.+... .....+.+.+|+.++++++||||+++++++..+ ..++||||
T Consensus 15 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~ 93 (281)
T 3cc6_A 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMEL 93 (281)
T ss_dssp EEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEEC
T ss_pred EEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEec
Confidence 456899999999999998643 35999998865 344567899999999999999999999998754 56899999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 94 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 168 (281)
T 3cc6_A 94 YPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY- 168 (281)
T ss_dssp CTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred CCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccccc-
Confidence 9999999999752 45689999999999999999999998 999999999999999999999999999986643221
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+... .+..+...
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~-------~~~~~~~~-------- 233 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-------VLEKGDRL-------- 233 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH-------HHHHTCCC--------
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH-------HHhcCCCC--------
Confidence 12233457789999999998899999999999999999998 999998665443211 11111110
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
..+......+.+++.+||+.+|++||++.|+++.|+++.+.+.
T Consensus 234 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 234 -PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 0111223467899999999999999999999999999887754
No 82
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=334.73 Aligned_cols=245 Identities=24% Similarity=0.369 Sum_probs=193.4
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCCh--------------------------hhHHHHHHHHHHHHHhc
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA--------------------------QGFQQFQAEVKLLMRVH 619 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~--------------------------~~~~~f~~Ei~~L~~l~ 619 (878)
+.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++++++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 345689999999999999875 48899999875431 12356899999999999
Q ss_pred ccceeeeeecccC--CCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccE
Q 002809 620 HRNLTSLVGHCDE--DNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNI 697 (878)
Q Consensus 620 H~nIv~l~g~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NI 697 (878)
||||+++++++.. .+..++||||+++++|.+++. ...+++..++.++.|+++||+|||+. +|+||||||+||
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 9999999999876 567899999999999998765 45699999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCC---CCCccchhhHHHHHHHHHhCCCCCCCCChH
Q 002809 698 LLNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNR---LTEKSDVYSFGVVILEIITCKPAISRINEE 774 (878)
Q Consensus 698 Ll~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~---~t~ksDV~S~Gvvl~elltG~~p~~~~~~~ 774 (878)
|++.++.+||+|||+++...... .......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||......
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 99999999999999998764322 1223456999999999998765 477899999999999999999999876543
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 775 EKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 775 ~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.. . ..+........ ........+.+++.+||+.+|++||+++|+++
T Consensus 247 ~~------~-~~~~~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 247 CL------H-SKIKSQALEFP--------DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HH------H-HHHHHCCCCCC--------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HH------H-HHHhcccCCCC--------CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 21 1 11111211100 01112346789999999999999999999975
No 83
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=344.33 Aligned_cols=256 Identities=27% Similarity=0.424 Sum_probs=202.9
Q ss_pred hcccccccccEEEEEEEEcc------eeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 570 FERTLGKGGFGTVYYGRLNE------IDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~~~------~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.||+|+||.||+|+... ..||||++.... ......+.+|++++.+++||||+++++++...+..++||||
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 45789999999999998753 359999997653 34556899999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 128 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 203 (333)
T 1mqb_A 128 MENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203 (333)
T ss_dssp CTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred CCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence 9999999999752 45699999999999999999999998 9999999999999999999999999999876433221
Q ss_pred -cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 723 -HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 723 -~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
.......++..|+|||.+.+..++.++|||||||++|||++ |+.||......+. . ..+..+...
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~---~----~~~~~~~~~------- 269 (333)
T 1mqb_A 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV---M----KAINDGFRL------- 269 (333)
T ss_dssp -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---H----HHHHTTCCC-------
T ss_pred ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH---H----HHHHCCCcC-------
Confidence 11222346778999999999999999999999999999999 9999987654331 1 112222100
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
..+......+.+++.+||+.+|++||+++++++.|++++....
T Consensus 270 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 270 --PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp --CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred --CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 1112233468899999999999999999999999999886533
No 84
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3e-37 Score=342.00 Aligned_cols=270 Identities=24% Similarity=0.416 Sum_probs=212.0
Q ss_pred HHHHHHHhhhcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHH--hcccceeeeeecccCCC----
Q 002809 561 SDVVKITNNFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMR--VHHRNLTSLVGHCDEDN---- 634 (878)
Q Consensus 561 ~dl~~~t~~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~--l~H~nIv~l~g~~~~~~---- 634 (878)
.+.....+.+.+.||+|+||.||+|+..++.||||++... ....+.+|++++.. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 4445556677899999999999999999999999998654 34577889999988 68999999999998775
Q ss_pred cceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCccEEEcCCCcEE
Q 002809 635 QTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLH--------NGCKPPIVHRDVKSTNILLNEKLQAK 706 (878)
Q Consensus 635 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDLKp~NILl~~~~~~k 706 (878)
..++||||+++|+|.+++.. ..+++..++.++.|+++||+||| +. +|+||||||+|||++.++.+|
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEE
T ss_pred eeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEE
Confidence 78999999999999999974 46899999999999999999999 66 999999999999999999999
Q ss_pred EeecCCccccccCCCCc--ccccccCCCCccCccccccC------CCCCccchhhHHHHHHHHHhC----------CCCC
Q 002809 707 LADFGLSKSFATDANTH--VSTVVAGTPGYLDPEYYTSN------RLTEKSDVYSFGVVILEIITC----------KPAI 768 (878)
Q Consensus 707 L~DFGla~~~~~~~~~~--~~~~~~gt~~Y~APE~~~~~------~~t~ksDV~S~Gvvl~elltG----------~~p~ 768 (878)
|+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 99999998764332211 12345699999999999765 234689999999999999999 6777
Q ss_pred CCCChHHHHHHHHHHHHHHhcCCcccccCCccccc-cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 769 SRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED-FDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 769 ~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
........ ....+... +.... ..+.+... ...++...+.+++.+||+.+|++||+++||++.|+++.+.+.
T Consensus 268 ~~~~~~~~-~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 268 YDLVPSDP-SVEEMRKV-VCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp TTTSCSSC-CHHHHHHH-HTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred cccCcCcc-cHHHHHHH-HHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 65432110 11112111 11111 12222211 134567789999999999999999999999999999876543
No 85
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-37 Score=336.41 Aligned_cols=254 Identities=26% Similarity=0.451 Sum_probs=203.7
Q ss_pred hcccccccccEEEEEEEEcc-----eeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcc-eeEeee
Q 002809 570 FERTLGKGGFGTVYYGRLNE-----IDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQT-ALIYEF 642 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~~~-----~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~-~lV~Ey 642 (878)
..+.||+|+||.||+|+..+ ..||+|++.... ....+.+.+|++++++++||||+++++++...+.. ++|+||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 35789999999999998632 369999987643 34567899999999999999999999999766655 999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCC--
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDA-- 720 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-- 720 (878)
+.+|+|.+++.. ....+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 105 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 105 MCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180 (298)
T ss_dssp CTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred ccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence 999999999975 345689999999999999999999998 99999999999999999999999999998653322
Q ss_pred CCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHHHHHhcCCcccccCCc
Q 002809 721 NTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCK-PAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 721 ~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~-~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
.........++..|+|||.+.+..++.++||||||++++||++|+ +|+....... +... +..+..
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~---~~~~----~~~~~~------- 246 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD---LTHF----LAQGRR------- 246 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG---HHHH----HHTTCC-------
T ss_pred ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH---HHHH----hhcCCC-------
Confidence 111223345788999999999999999999999999999999955 5555444332 1111 111110
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
...+......+.+++.+||+.+|++|||++++++.|++++..
T Consensus 247 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 247 --LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 011112234688999999999999999999999999998765
No 86
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-37 Score=341.42 Aligned_cols=248 Identities=18% Similarity=0.308 Sum_probs=203.4
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+++.. +..||+|.+.... .....+.+|++++.+++||||+++++++.+.+..++||||+++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 85 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISG 85 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCC
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCC
Confidence 345689999999999999886 4889999987543 3456789999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC--CCcEEEeecCCccccccCCCCc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE--KLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~ 723 (878)
|+|.+++.. ....+++..++.++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++.+....
T Consensus 86 ~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--- 158 (321)
T 1tki_A 86 LDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--- 158 (321)
T ss_dssp CBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC---
Confidence 999999975 234699999999999999999999998 9999999999999997 7899999999998764322
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
......||+.|+|||++.+..++.++|||||||++|||++|++||......+.. .... .+... .+....
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~------~~i~-~~~~~--~~~~~~-- 227 (321)
T 1tki_A 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII------ENIM-NAEYT--FDEEAF-- 227 (321)
T ss_dssp EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------HHHH-HTCCC--CCHHHH--
T ss_pred ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH------HHHH-cCCCC--CChhhh--
Confidence 223456899999999999888999999999999999999999999876653311 1111 11110 000000
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 228 --~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 228 --KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1123467899999999999999999999884
No 87
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.8e-37 Score=337.29 Aligned_cols=256 Identities=27% Similarity=0.500 Sum_probs=202.7
Q ss_pred hhhcccccccccEEEEEEEEcc-----eeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecc-cCCCcceeEe
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-----IDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHC-DEDNQTALIY 640 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-----~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~-~~~~~~~lV~ 640 (878)
+.+.+.||+|+||.||+|+..+ ..+|+|.+... .....+.+.+|+.++++++||||+++++++ ..++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 3456899999999999998643 35899998764 344567899999999999999999999985 5566789999
Q ss_pred eeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCC
Q 002809 641 EFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDA 720 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~ 720 (878)
||+++|+|.++++. ....+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 107 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 107 PYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp ECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred eCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 99999999999975 345689999999999999999999998 99999999999999999999999999998664322
Q ss_pred C--CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccC
Q 002809 721 N--THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVD 797 (878)
Q Consensus 721 ~--~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid 797 (878)
. ........+++.|+|||.+.+..++.++||||||++++||++ |.+||......+.. . ....+.. ..
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~---~----~~~~~~~--~~- 252 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT---V----YLLQGRR--LL- 252 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH---H----HHHTTCC--CC-
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH---H----HHhcCCC--CC-
Confidence 1 112233457789999999999999999999999999999999 56676655443211 1 1111110 00
Q ss_pred CccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 798 PRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 798 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
.+......+.+++.+||+.+|++||+++|+++.|++++..
T Consensus 253 ------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 253 ------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1111234688999999999999999999999999998753
No 88
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.1e-37 Score=344.96 Aligned_cols=250 Identities=25% Similarity=0.403 Sum_probs=204.4
Q ss_pred HHhhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
..+.+.+.||+|+||.||+++.. +..||+|++... .....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e 108 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 34566789999999999999875 488999999754 33456789999999999999999999999999999999999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC---cEEEeecCCcccccc
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL---QAKLADFGLSKSFAT 718 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~---~~kL~DFGla~~~~~ 718 (878)
|+++|+|.+++.. ...+++..+..++.||++||+|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 109 ~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 109 LVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999999875 56799999999999999999999998 999999999999998654 599999999987643
Q ss_pred CCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCC
Q 002809 719 DANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDP 798 (878)
Q Consensus 719 ~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~ 798 (878)
.. ......||+.|+|||++.+..++.++|||||||++|||++|++||........ . ..+..+... ...+
T Consensus 184 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---~----~~i~~~~~~-~~~~ 252 (362)
T 2bdw_A 184 SE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL---Y----AQIKAGAYD-YPSP 252 (362)
T ss_dssp CC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H----HHHHHTCCC-CCTT
T ss_pred Cc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH---H----HHHHhCCCC-CCcc
Confidence 22 22345799999999999999999999999999999999999999987654321 1 112222211 0000
Q ss_pred ccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 799 RLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 799 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.. .....++.+++.+||+.+|++||++.|+++.
T Consensus 253 -~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 -EW----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -GG----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -cc----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01 1223467899999999999999999998864
No 89
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-38 Score=347.83 Aligned_cols=248 Identities=22% Similarity=0.366 Sum_probs=194.5
Q ss_pred hhhcccccccccEEEEEEEEcc-eeEEEEEeccC--ChhhHHHHHHHHHHHHHhcc--cceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHH--RNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H--~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||++...+ +.||||++... .....+.+.+|++++.+++| +||+++++++..++..++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence 3456899999999999998765 78999998754 34456789999999999986 999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+.+|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++.+......
T Consensus 90 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 90 CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CCSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 568899999986 56799999999999999999999998 999999999999997 578999999999877544333
Q ss_pred cccccccCCCCccCcccccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC
Q 002809 723 HVSTVVAGTPGYLDPEYYTS-----------NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD 791 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~-----------~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~ 791 (878)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ . .....
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~----~~~~~---- 234 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-K----LHAII---- 234 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-H----HHHHH----
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH-H----HHHHh----
Confidence 33445679999999999865 6788999999999999999999999976543211 1 11111
Q ss_pred cccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 792 IKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 792 ~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
++.....++......+.+++.+||+.+|++|||++|+++.
T Consensus 235 -----~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 235 -----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp -----CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111112222223467899999999999999999999875
No 90
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-37 Score=339.86 Aligned_cols=269 Identities=25% Similarity=0.428 Sum_probs=204.6
Q ss_pred HHHHhhhcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHh--cccceeeeeecccCC----Ccce
Q 002809 564 VKITNNFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRV--HHRNLTSLVGHCDED----NQTA 637 (878)
Q Consensus 564 ~~~t~~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l--~H~nIv~l~g~~~~~----~~~~ 637 (878)
....+.+.+.||+|+||.||+|+..++.||||++.... ...+..|.+++..+ +||||+++++++... ...+
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred cccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 34455677899999999999999999999999986543 24455566666554 899999999998776 6789
Q ss_pred eEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEecCCCCccEEEcCCCcEEEeecCC
Q 002809 638 LIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGC-----KPPIVHRDVKSTNILLNEKLQAKLADFGL 712 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDLKp~NILl~~~~~~kL~DFGl 712 (878)
+||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||+
T Consensus 112 lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 112 LITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp EEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence 99999999999999964 46999999999999999999999752 44899999999999999999999999999
Q ss_pred ccccccCCCCc--ccccccCCCCccCccccccCCCCCc------cchhhHHHHHHHHHhC----------CCCCCCCChH
Q 002809 713 SKSFATDANTH--VSTVVAGTPGYLDPEYYTSNRLTEK------SDVYSFGVVILEIITC----------KPAISRINEE 774 (878)
Q Consensus 713 a~~~~~~~~~~--~~~~~~gt~~Y~APE~~~~~~~t~k------sDV~S~Gvvl~elltG----------~~p~~~~~~~ 774 (878)
++.+....... ......||+.|+|||++.+...+.+ +|||||||++|||+|| +.||......
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 268 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence 97664332211 1123569999999999988776665 9999999999999999 6666553321
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCcccccc-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 775 EKIHIRQWVNSLIAKGDIKSIVDPRLQEDF-DANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 775 ~~~~l~~~v~~~~~~~~~~~iid~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
.. .... ......... ..+.+.... ...+..++.+++.+||+.+|++||+++||++.|+++.+..
T Consensus 269 ~~-~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 269 DP-SYED-MREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SC-CHHH-HHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CC-chhh-hHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 11 0011 111111111 112222111 2356778999999999999999999999999999987653
No 91
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=352.33 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=203.3
Q ss_pred HhhhcccccccccEEEEEEEEc--ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
.+.+.+.||+|+||.||+++.. ++.+|+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~ 91 (444)
T 3soa_A 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL 91 (444)
T ss_dssp HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEe
Confidence 4566789999999999999874 4889999987653 33456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEc---CCCcEEEeecCCccccccC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLN---EKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~ 719 (878)
+++|+|.+.+.. +..+++..+..++.||++||+|||+. +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 92 ~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 92 VTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 999999999976 56799999999999999999999998 999999999999998 4678999999999876432
Q ss_pred CCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCc
Q 002809 720 ANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 720 ~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
. .......||+.|+|||++.+..++.++||||+||++|||++|++||......+.. ..+..+... ...+.
T Consensus 167 ~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~-------~~i~~~~~~-~~~~~ 236 (444)
T 3soa_A 167 Q--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY-------QQIKAGAYD-FPSPE 236 (444)
T ss_dssp C--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-------HHHHHTCCC-CCTTT
T ss_pred C--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH-------HHHHhCCCC-CCccc
Confidence 2 2223457999999999999999999999999999999999999999876543311 112222211 00111
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
......++.+++.+||+.||++||+++|+++.
T Consensus 237 -----~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 237 -----WDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -----cccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11223467899999999999999999999874
No 92
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.3e-37 Score=338.23 Aligned_cols=257 Identities=23% Similarity=0.359 Sum_probs=197.8
Q ss_pred hhcccccccccEEEEEEEEcc-eeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
.+.+.||+|+||.||+++..+ +.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 24 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~- 102 (311)
T 3niz_A 24 QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME- 102 (311)
T ss_dssp EEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-
T ss_pred HhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-
Confidence 456899999999999999854 889999987543 2235678999999999999999999999999999999999997
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 103 ~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~ 176 (311)
T 3niz_A 103 KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV--RSY 176 (311)
T ss_dssp EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--C--
T ss_pred CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCc--ccc
Confidence 4888887652 45699999999999999999999998 99999999999999999999999999998764222 222
Q ss_pred ccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCc---cc-------
Q 002809 726 TVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDI---KS------- 794 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~---~~------- 794 (878)
....||+.|+|||++.+ ..++.++|||||||+++||++|+.||......+... . +......... ..
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~-i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP--K-IFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHH--H-HHHHHCCCCTTTSGGGTTSHHH
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHH--H-HHHHHCCCChHHhhhhhccchh
Confidence 33568999999999876 568999999999999999999999998766543221 1 1111111100 00
Q ss_pred ------ccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 795 ------IVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 795 ------iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
..+.............++.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000011122346789999999999999999999986
No 93
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=348.29 Aligned_cols=244 Identities=24% Similarity=0.360 Sum_probs=198.3
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccC---ChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSS---SAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
+.+.+.||+|+||.||+++... +.||||++.+. .....+.+.+|..++..+ +||||+++++++...+..++|||
T Consensus 25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E 104 (353)
T 3txo_A 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVME 104 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEe
Confidence 3456899999999999998864 78999999754 223456788999999998 69999999999999999999999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 105 ~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~-- 177 (353)
T 3txo_A 105 FVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN-- 177 (353)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC--
Confidence 9999999999976 45699999999999999999999998 9999999999999999999999999999754222
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
.......+||+.|+|||++.+..++.++|||||||++|||++|++||...+..+.. ..+..+.. .
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~-------~~i~~~~~------~-- 242 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF-------EAILNDEV------V-- 242 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHCCC------C--
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH-------HHHHcCCC------C--
Confidence 12234467999999999999989999999999999999999999999876654321 11112211 1
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTM------SQVVM 835 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm------~evl~ 835 (878)
++......+.+++.+||+.+|++||++ +|+++
T Consensus 243 --~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 243 --YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 111223467899999999999999998 77766
No 94
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.7e-38 Score=344.17 Aligned_cols=260 Identities=28% Similarity=0.449 Sum_probs=204.2
Q ss_pred hhhcccccccccEEEEEEEE------cceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCC--Cccee
Q 002809 568 NNFERTLGKGGFGTVYYGRL------NEIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDED--NQTAL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~------~~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~l 638 (878)
+.+.+.||+|+||.||++++ .++.||||++.... ....+.+.+|++++.+++||||+++++++... ...++
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 45678999999999999984 34889999997543 33457899999999999999999999999776 66899
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccccc
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~ 718 (878)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 103 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 99999999999999653 45699999999999999999999998 999999999999999999999999999987644
Q ss_pred CCCC-cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHH---------HHHHHHHHHHHHh
Q 002809 719 DANT-HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEE---------KIHIRQWVNSLIA 788 (878)
Q Consensus 719 ~~~~-~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~---------~~~l~~~v~~~~~ 788 (878)
.... .......||..|+|||.+.+..++.++||||||++++||++|+.|+....... ........ ....
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 257 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV-NTLK 257 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH-HHHH
T ss_pred CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH-HHHh
Confidence 3221 22334557888999999999999999999999999999999998864321100 00111111 1111
Q ss_pred cCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002809 789 KGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECL 841 (878)
Q Consensus 789 ~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~ 841 (878)
.+. ....+......+.+++.+||+.+|++|||++|+++.|++++
T Consensus 258 ~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111 11122233457889999999999999999999999999876
No 95
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.8e-37 Score=344.85 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=201.7
Q ss_pred HHhhhcccccccccEEEEEEEEc--ceeEEEEEeccCC-----hhhHHHHHHHHHHHHHhcccceeeeeecccCCCccee
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-----AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-----~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l 638 (878)
..+.+.+.||+|+||.||+++.. ++.||||++.... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 34667789999999999999875 4889999986421 1235789999999999999999999999999999999
Q ss_pred EeeeccCCChhhhhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc---EEEeecCCc
Q 002809 639 IYEFMANGNLQEYLSDIS--KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ---AKLADFGLS 713 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~---~kL~DFGla 713 (878)
||||+++|+|.+++.... ...+++..+..++.||++||+|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 999999999998886532 34589999999999999999999998 9999999999999987654 999999999
Q ss_pred cccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcc
Q 002809 714 KSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIK 793 (878)
Q Consensus 714 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~ 793 (878)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... + . ..+..+...
T Consensus 181 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~---~-~~i~~~~~~ 250 (351)
T 3c0i_A 181 IQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER----L---F-EGIIKGKYK 250 (351)
T ss_dssp EECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH----H---H-HHHHHTCCC
T ss_pred eEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH----H---H-HHHHcCCCC
Confidence 8764322 2233456999999999999999999999999999999999999999864321 1 1 111112110
Q ss_pred cccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 794 SIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 794 ~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
..+.... .....+.+++.+||+.||++||++.|+++
T Consensus 251 --~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 --MNPRQWS----HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --CCccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0111111 12346789999999999999999999986
No 96
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.3e-37 Score=335.62 Aligned_cols=258 Identities=26% Similarity=0.434 Sum_probs=207.0
Q ss_pred hhcc-cccccccEEEEEEEEc----ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 569 NFER-TLGKGGFGTVYYGRLN----EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 569 ~f~~-~LG~G~fG~Vy~~~~~----~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
.+.+ .||+|+||.||+|... ++.||||++.... ....+.+.+|++++.+++||||+++++++ ..+..++|||
T Consensus 19 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e 97 (291)
T 1xbb_A 19 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVME 97 (291)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred hhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEE
Confidence 3445 8999999999999653 3789999997643 33467899999999999999999999999 5667899999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++++|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 98 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 98 MAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp CCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred eCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 9999999999976 45699999999999999999999998 999999999999999999999999999987643322
Q ss_pred Cc-ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCc
Q 002809 722 TH-VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 722 ~~-~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
.. ......++..|+|||.+.+..++.++||||||++++||++ |+.||......+. . ..+..+...
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~----~~~~~~~~~------ 239 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV---T----AMLEKGERM------ 239 (291)
T ss_dssp EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH---H----HHHHTTCCC------
T ss_pred cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH---H----HHHHcCCCC------
Confidence 11 1222346788999999998889999999999999999999 9999987665331 1 122222211
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARA 848 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~ 848 (878)
..+......+.+++.+||+.+|++||++.++++.|+++...+....
T Consensus 240 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 285 (291)
T 1xbb_A 240 ---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285 (291)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence 1122233578899999999999999999999999999887755443
No 97
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3e-37 Score=349.46 Aligned_cols=246 Identities=20% Similarity=0.364 Sum_probs=197.0
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCC---hhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSS---AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
+.+.+.||+|+||.||+++... +.||+|++.+.. ....+.+.+|..++.++ +||||+++++++..++..++|||
T Consensus 54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E 133 (396)
T 4dc2_A 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 133 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEE
Confidence 3556899999999999999864 789999997642 23345688999999887 89999999999999999999999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 134 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~- 207 (396)
T 4dc2_A 134 YVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 207 (396)
T ss_dssp CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCC-
Confidence 9999999999976 45799999999999999999999998 99999999999999999999999999998532221
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHHHHHhcCCcccccCCc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEK--IHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~--~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
......+||+.|+|||++.+..++.++|||||||++|||++|++||......+. ....+++...+..+.+ .
T Consensus 208 -~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~ 280 (396)
T 4dc2_A 208 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R 280 (396)
T ss_dssp -CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------C
T ss_pred -CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------C
Confidence 223456799999999999999999999999999999999999999975332111 1111222222222221 1
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCCCCCH
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQRPTM 830 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm 830 (878)
++.....++.+++.+||+.+|++||++
T Consensus 281 ----~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 ----IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 112223467899999999999999995
No 98
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5e-38 Score=370.47 Aligned_cols=251 Identities=26% Similarity=0.431 Sum_probs=207.8
Q ss_pred hhcccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCC
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
.+.+.||+|+||.||+|++.+ ..||||++..... ..+.|.+|+++|++++|+||+++++++.+ +..++||||+++|+
T Consensus 270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gs 347 (535)
T 2h8h_A 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 347 (535)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEE
T ss_pred hhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCc
Confidence 567899999999999999987 7899999986543 34789999999999999999999999876 67899999999999
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccccc
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTV 727 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 727 (878)
|.++++......+++..++.++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++...... ......
T Consensus 348 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~ 423 (535)
T 2h8h_A 348 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQG 423 (535)
T ss_dssp HHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HHTTCS
T ss_pred HHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-eecccC
Confidence 99999865556799999999999999999999998 99999999999999999999999999998653211 111223
Q ss_pred ccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 728 VAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 728 ~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
..++..|+|||++.+..++.++|||||||++|||++ |+.||......+.. ..+..+.. ...+.
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~-------~~i~~~~~---------~~~~~ 487 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQVERGYR---------MPCPP 487 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHH-------HHHHTTCC---------CCCCT
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-------HHHHcCCC---------CCCCC
Confidence 346788999999999999999999999999999999 99999876654321 11222211 01122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVMELSECL 841 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~ 841 (878)
.+...+.+++.+||+.+|++||++++|++.|+++.
T Consensus 488 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 488 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 33457889999999999999999999999998754
No 99
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=337.78 Aligned_cols=247 Identities=25% Similarity=0.316 Sum_probs=195.5
Q ss_pred HHHHHHhhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcc
Q 002809 562 DVVKITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQT 636 (878)
Q Consensus 562 dl~~~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~ 636 (878)
++....+.+.+.||+|+||+||+|+.. ++.||||++... .......+..|+..+.++ +||||++++++|.+++..
T Consensus 53 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~ 132 (311)
T 3p1a_A 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132 (311)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred chhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEE
Confidence 445556667789999999999999986 488999998654 233445666777777666 899999999999999999
Q ss_pred eeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccc
Q 002809 637 ALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSF 716 (878)
Q Consensus 637 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~ 716 (878)
++||||+ +++|.+++... +..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 133 YLQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 9999999 77999988753 45699999999999999999999998 9999999999999999999999999998765
Q ss_pred ccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccccc
Q 002809 717 ATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIV 796 (878)
Q Consensus 717 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ii 796 (878)
... .......||+.|+|||++.+ .++.++|||||||++|||++|..++..... | ..+..+...
T Consensus 208 ~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--------~--~~~~~~~~~--- 270 (311)
T 3p1a_A 208 GTA---GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--------W--QQLRQGYLP--- 270 (311)
T ss_dssp C---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--------H--HHHTTTCCC---
T ss_pred ccC---CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--------H--HHHhccCCC---
Confidence 332 22334569999999999876 789999999999999999999776643211 0 111111111
Q ss_pred CCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 797 DPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 797 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
+ .........+.+++.+||+.+|++||+++|+++
T Consensus 271 -~----~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 -P----EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -H----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -c----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1 111122347889999999999999999999986
No 100
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3e-37 Score=349.17 Aligned_cols=264 Identities=19% Similarity=0.277 Sum_probs=202.8
Q ss_pred hhhccccccc--ccEEEEEEEEc--ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 568 NNFERTLGKG--GFGTVYYGRLN--EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G--~fG~Vy~~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
+.+.+.||+| +||.||+++.. ++.||||++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 106 (389)
T 3gni_B 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 106 (389)
T ss_dssp EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEE
Confidence 3567899999 99999999986 4889999997543 4456778899999999999999999999999999999999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+........
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 107 FMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp CCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred ccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 99999999999876557799999999999999999999998 999999999999999999999999998865432211
Q ss_pred -----CcccccccCCCCccCcccccc--CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHh------
Q 002809 722 -----THVSTVVAGTPGYLDPEYYTS--NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIA------ 788 (878)
Q Consensus 722 -----~~~~~~~~gt~~Y~APE~~~~--~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~------ 788 (878)
........||..|+|||++.+ ..++.++|||||||++|||++|+.||.......... ........
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL--EKLNGTVPCLLDTS 261 (389)
T ss_dssp ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH--HC------------
T ss_pred cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHhcCCCCcccccc
Confidence 111223468899999999987 679999999999999999999999998754432110 00000000
Q ss_pred ----------------cCCcccccC---Ccc------ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 789 ----------------KGDIKSIVD---PRL------QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 789 ----------------~~~~~~iid---~~l------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.......+. +.. ...........+.+++.+||+.||++|||++|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000000000 000 000112223468899999999999999999999864
No 101
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.5e-37 Score=335.40 Aligned_cols=257 Identities=28% Similarity=0.444 Sum_probs=197.0
Q ss_pred hhhcccccccccEEEEEEEEcc-----eeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCC-----c
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-----IDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN-----Q 635 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-----~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-----~ 635 (878)
+.+.+.||+|+||.||+|+... ..||+|++... .....+.+.+|+.++.+++||||+++++++...+ .
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 36 LILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred eeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 3456889999999999997642 47999998754 3445678999999999999999999999987655 3
Q ss_pred ceeEeeeccCCChhhhhccc----cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecC
Q 002809 636 TALIYEFMANGNLQEYLSDI----SKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFG 711 (878)
Q Consensus 636 ~~lV~Ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFG 711 (878)
.++||||+++|+|.+++... ....+++..++.++.|+++||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecC
Confidence 49999999999999998432 245799999999999999999999998 99999999999999999999999999
Q ss_pred CccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcC
Q 002809 712 LSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKG 790 (878)
Q Consensus 712 la~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~ 790 (878)
+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......... . .+..+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~----~~~~~ 265 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY---D----YLLHG 265 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH---H----HHHTT
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH---H----HHHcC
Confidence 9987644332233344557889999999999999999999999999999999 88999876543311 1 11111
Q ss_pred CcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 791 DIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 791 ~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
... ..+......+.+++.+||+.+|++||+++++++.|++++..
T Consensus 266 ~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 266 HRL---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp CCC---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111 11122334688999999999999999999999999998753
No 102
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=344.87 Aligned_cols=263 Identities=27% Similarity=0.422 Sum_probs=208.0
Q ss_pred hhhcccccccccEEEEEEEE------cceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCC--cceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRL------NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN--QTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~------~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~--~~~lV 639 (878)
+.+.+.||+|+||.||+++. .++.||||++........+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 34568999999999999985 34789999998877777789999999999999999999999886544 78999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
|||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 123 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp ECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred EECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 9999999999999753 35699999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCC-cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHH---------HHHHHHHHHHHhc
Q 002809 720 ANT-HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEK---------IHIRQWVNSLIAK 789 (878)
Q Consensus 720 ~~~-~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~---------~~l~~~v~~~~~~ 789 (878)
... .......++..|+|||.+.+..++.++||||||++++||+||+.|+.....+-. ......+...+..
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 221 112234567789999999988899999999999999999999998764311100 0001111111111
Q ss_pred CCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 790 GDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 790 ~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
+. ....+.....++.+++.+||+.+|++||+++|+++.|+++.+.
T Consensus 279 ~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 279 NG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11 1111223345788999999999999999999999999997643
No 103
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=345.65 Aligned_cols=251 Identities=22% Similarity=0.353 Sum_probs=201.2
Q ss_pred cccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCCh
Q 002809 571 ERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGNL 648 (878)
Q Consensus 571 ~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 648 (878)
.+.||+|+||.||+|+.. ++.||+|++........+.+.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 457999999999999875 488999999887767778899999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE--cCCCcEEEeecCCccccccCCCCcccc
Q 002809 649 QEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL--NEKLQAKLADFGLSKSFATDANTHVST 726 (878)
Q Consensus 649 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl--~~~~~~kL~DFGla~~~~~~~~~~~~~ 726 (878)
.+++.. ....+++..++.++.||++||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..... ..
T Consensus 174 ~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~ 246 (373)
T 2x4f_A 174 FDRIID-ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LK 246 (373)
T ss_dssp HHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CC
T ss_pred HHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---cc
Confidence 998864 245689999999999999999999998 99999999999999 5678999999999987643322 23
Q ss_pred cccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCH
Q 002809 727 VVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDA 806 (878)
Q Consensus 727 ~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~ 806 (878)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+. +. ..... .. . +.+... .
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~----~i~~~-~~-~-~~~~~~----~ 313 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET--LN----NILAC-RW-D-LEDEEF----Q 313 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HH----HHHHT-CC-C-SCSGGG----T
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HH----HHHhc-cC-C-CChhhh----c
Confidence 34699999999999998999999999999999999999999987665432 11 11111 10 0 001111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHHH
Q 002809 807 NSVWKAVELAMACLSPTGNQRPTMSQVVM--ELSECL 841 (878)
Q Consensus 807 ~~~~~l~~l~~~Cl~~dP~~RPsm~evl~--~L~~~~ 841 (878)
....++.+++.+||+.+|++||+++|+++ .+++..
T Consensus 314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~ 350 (373)
T 2x4f_A 314 DISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHK 350 (373)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHH
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCc
Confidence 12346789999999999999999999998 455543
No 104
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.8e-37 Score=333.88 Aligned_cols=248 Identities=32% Similarity=0.513 Sum_probs=198.8
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChh-------hHHHHHHHHHHHHHhcccceeeeeecccCCCccee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQ-------GFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~-------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l 638 (878)
+.+.+.||+|+||.||+|+.. ++.||+|++...... ..+.+.+|++++.+++||||+++++++.... ++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~l 98 (287)
T 4f0f_A 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RM 98 (287)
T ss_dssp EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EE
T ss_pred ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eE
Confidence 355689999999999999984 488999998654322 1267899999999999999999999987655 69
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCccEEEcCCCc-----EEEeecC
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPP--IVHRDVKSTNILLNEKLQ-----AKLADFG 711 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDLKp~NILl~~~~~-----~kL~DFG 711 (878)
||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++. +||+|||
T Consensus 99 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred EEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 9999999999998865 245799999999999999999999998 7 999999999999988776 9999999
Q ss_pred CccccccCCCCcccccccCCCCccCccccc--cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhc
Q 002809 712 LSKSFATDANTHVSTVVAGTPGYLDPEYYT--SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAK 789 (878)
Q Consensus 712 la~~~~~~~~~~~~~~~~gt~~Y~APE~~~--~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~ 789 (878)
+++.... ......|++.|+|||.+. ...++.++|||||||++|||++|+.||........... ......
T Consensus 175 ~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~~~~~ 245 (287)
T 4f0f_A 175 LSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI----NMIREE 245 (287)
T ss_dssp TCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHH----HHHHHS
T ss_pred ccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHH----HHHhcc
Confidence 9875422 223356899999999984 45678999999999999999999999987654332111 111111
Q ss_pred CCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002809 790 GDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSE 839 (878)
Q Consensus 790 ~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~ 839 (878)
... + ..+......+.+++.+||+.+|++||+++|+++.|++
T Consensus 246 -~~~----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 246 -GLR----P----TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp -CCC----C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -CCC----C----CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 111 1 1122233578899999999999999999999999985
No 105
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.8e-37 Score=341.47 Aligned_cols=245 Identities=21% Similarity=0.378 Sum_probs=197.6
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccC---ChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEeee
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS---SAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
.+.+.||+|+||.||+++.. ++.||+|++.+. .....+.+.+|..++.++ +||||+++++++...+..++||||
T Consensus 12 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~ 91 (345)
T 3a8x_A 12 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 91 (345)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeC
Confidence 45689999999999999986 488999999754 334456788999999998 899999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++|+|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 92 ~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~-- 164 (345)
T 3a8x_A 92 VNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-- 164 (345)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT--
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC--
Confidence 999999999975 45699999999999999999999998 99999999999999999999999999997542221
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHHHHHhcCCcccccCCcc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEK--IHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~--~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..........+..+.. .+
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~ 238 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RI 238 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------CC
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------CC
Confidence 223446799999999999999999999999999999999999999975322110 0111122222222221 11
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTM 830 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm 830 (878)
+......+.+++.+||+.+|++||++
T Consensus 239 ----p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 239 ----PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11223467899999999999999996
No 106
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-37 Score=345.66 Aligned_cols=249 Identities=20% Similarity=0.330 Sum_probs=205.4
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+|+.. ++.||+|++..........+.+|++++.+++||||+++++++......++||||+++
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~g 132 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG 132 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCC
Confidence 456789999999999999885 478999999877666667899999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC--CCcEEEeecCCccccccCCCCc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE--KLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~ 723 (878)
|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 133 g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~--- 205 (387)
T 1kob_A 133 GELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--- 205 (387)
T ss_dssp CBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS---
T ss_pred CcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc---
Confidence 9999998752 34699999999999999999999998 9999999999999974 4689999999998764322
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .. +...... .++..
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~------~~-i~~~~~~--~~~~~--- 273 (387)
T 1kob_A 206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL------QN-VKRCDWE--FDEDA--- 273 (387)
T ss_dssp CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------HH-HHHCCCC--CCSST---
T ss_pred ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH------HH-HHhCCCC--CCccc---
Confidence 223356999999999999999999999999999999999999999876543211 11 1111110 11111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
......++.+++.+||+.+|++||+++|+++.
T Consensus 274 -~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 -FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11223467899999999999999999999874
No 107
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=343.99 Aligned_cols=266 Identities=16% Similarity=0.199 Sum_probs=207.7
Q ss_pred hhhcccccccccEEEEEEEEc----------ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceee------------
Q 002809 568 NNFERTLGKGGFGTVYYGRLN----------EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTS------------ 625 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~----------~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~------------ 625 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... +.+.+|++++.+++||||++
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 456789999999999999874 478999998754 46889999999999999998
Q ss_pred ---eeecccC-CCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC
Q 002809 626 ---LVGHCDE-DNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE 701 (878)
Q Consensus 626 ---l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~ 701 (878)
+++++.. +...++||||+ +++|.+++.......+++..++.++.|+++||+|||++ +|+||||||+|||++.
T Consensus 119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDP 194 (352)
T ss_dssp CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEET
T ss_pred ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcC
Confidence 4555544 67889999999 99999999875457899999999999999999999998 9999999999999999
Q ss_pred CC--cEEEeecCCccccccCCCC-----cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChH
Q 002809 702 KL--QAKLADFGLSKSFATDANT-----HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEE 774 (878)
Q Consensus 702 ~~--~~kL~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~ 774 (878)
++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 9999999999876433211 1123347999999999999999999999999999999999999999876422
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002809 775 EKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARA 848 (878)
Q Consensus 775 ~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~ 848 (878)
. ..+......... ....+.+..... ......+.+++.+||+.+|++||++++|++.|++++.......
T Consensus 275 ~-~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 342 (352)
T 2jii_A 275 T-EDIMKQKQKFVD--KPGPFVGPCGHW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSP 342 (352)
T ss_dssp H-HHHHHHHHHHHH--SCCCEECTTSCE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCT
T ss_pred H-HHHHHHHHhccC--Chhhhhhhcccc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCc
Confidence 1 122222222211 112222211110 1112468899999999999999999999999999887654433
No 108
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.9e-37 Score=351.32 Aligned_cols=248 Identities=22% Similarity=0.361 Sum_probs=195.2
Q ss_pred hhhcccccccccEEEEEEEEcc-eeEEEEEeccC--ChhhHHHHHHHHHHHHHhc--ccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSS--SAQGFQQFQAEVKLLMRVH--HRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~--H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||++.... +.||||++... .....+.+.+|+++|.+++ ||||+++++++..++..++|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E- 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence 4556899999999999998765 78999998754 3445678999999999996 5999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+.+++|.+++.. ...+++..++.++.||++||+|||+. +|+||||||+|||++ ++.+||+|||+++.+......
T Consensus 137 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 137 CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 568899999976 45789999999999999999999998 999999999999995 579999999999876543333
Q ss_pred cccccccCCCCccCcccccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC
Q 002809 723 HVSTVVAGTPGYLDPEYYTS-----------NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD 791 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~-----------~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~ 791 (878)
.......||+.|+|||++.+ ..++.++|||||||++|||++|++||........ . .....
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~-~----~~~~~---- 281 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-K----LHAII---- 281 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-H----HHHHH----
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH-H----HHHHh----
Confidence 33345679999999999865 3688999999999999999999999976543211 1 11111
Q ss_pred cccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 792 IKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 792 ~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
++.....++......+.+++.+||+.+|++||+++|+++.
T Consensus 282 -----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 282 -----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp -----CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111111111223467899999999999999999999875
No 109
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=369.25 Aligned_cols=252 Identities=23% Similarity=0.427 Sum_probs=204.0
Q ss_pred cccccccEEEEEEEEc----ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCC
Q 002809 573 TLGKGGFGTVYYGRLN----EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 573 ~LG~G~fG~Vy~~~~~----~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
.||+|+||.||+|.+. +..||||+++... ....+.|.+|+++|++++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999874 3679999998653 3456889999999999999999999999976 56899999999999
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc-ccc
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH-VST 726 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-~~~ 726 (878)
|.+++... +..+++..++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++.+....... ...
T Consensus 422 L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 422 LHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp HHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred HHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 99999753 55699999999999999999999998 99999999999999999999999999998764332211 122
Q ss_pred cccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccC
Q 002809 727 VVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFD 805 (878)
Q Consensus 727 ~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~ 805 (878)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||......+. . ..+..+.. ...+
T Consensus 498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~---~----~~i~~~~~---------~~~p 561 (613)
T 2ozo_A 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV---M----AFIEQGKR---------MECP 561 (613)
T ss_dssp ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH---H----HHHHTTCC---------CCCC
T ss_pred CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---H----HHHHcCCC---------CCCC
Confidence 2345689999999999999999999999999999998 9999987665431 1 12222221 1122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 806 ANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 806 ~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
..+...+.+++.+||+.+|++||++++|++.|+.+.....
T Consensus 562 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 562 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 2344578899999999999999999999999999876543
No 110
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-37 Score=336.96 Aligned_cols=241 Identities=25% Similarity=0.370 Sum_probs=201.4
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.||+|+||.||+++.. ++.||+|++.+.. ....+.+.+|+.++..++||||+++++++.+.+..++||||+
T Consensus 9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~ 88 (318)
T 1fot_A 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYI 88 (318)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCC
Confidence 45689999999999999885 4889999997542 223567889999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~---- 159 (318)
T 1fot_A 89 EGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---- 159 (318)
T ss_dssp CSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC----
T ss_pred CCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc----
Confidence 99999999976 45799999999999999999999998 9999999999999999999999999999865321
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+.... ..... .+.. .+.
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~i~-~~~~------~~p-- 223 (318)
T 1fot_A 160 -TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT------YEKIL-NAEL------RFP-- 223 (318)
T ss_dssp -BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHH-HCCC------CCC--
T ss_pred -cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH------HHHHH-hCCC------CCC--
Confidence 2345799999999999999999999999999999999999999987654321 11111 1111 111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRP-----TMSQVVME 836 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----sm~evl~~ 836 (878)
.....++.+++.+||+.+|++|| +++|+++.
T Consensus 224 --~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 224 --PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp --TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 11224678999999999999999 88888863
No 111
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2e-37 Score=342.29 Aligned_cols=248 Identities=24% Similarity=0.320 Sum_probs=179.6
Q ss_pred ccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhc-ccceeeeeecccCCCcceeEeeeccCCCh
Q 002809 572 RTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH-HRNLTSLVGHCDEDNQTALIYEFMANGNL 648 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 648 (878)
+.||+|+||.||+++.. ++.||||++... ....+.+|+.++.+++ ||||+++++++.++...++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 68999999999999986 488999999754 3467789999999997 99999999999999999999999999999
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC---cEEEeecCCccccccCCCCccc
Q 002809 649 QEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL---QAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 649 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~---~~kL~DFGla~~~~~~~~~~~~ 725 (878)
.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++...... ...
T Consensus 94 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~ 166 (325)
T 3kn6_A 94 FERIKK--KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPL 166 (325)
T ss_dssp HHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Ccc
Confidence 999976 56799999999999999999999998 999999999999998765 89999999998654322 222
Q ss_pred ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccC
Q 002809 726 TVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFD 805 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~ 805 (878)
....||+.|+|||++.+..++.++|||||||+++||++|+.||..............+...+..+... +.....
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~ 240 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS------FEGEAW 240 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC------CCSHHH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC------CCcccc
Confidence 34568999999999999999999999999999999999999998654321111011112222222211 010111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 806 ANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 806 ~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.....++.+++.+||+.||++||+++|+++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 122357889999999999999999999874
No 112
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=341.19 Aligned_cols=254 Identities=24% Similarity=0.345 Sum_probs=187.7
Q ss_pred hhhcccccccccEEEEEEEE--cceeEEEEEeccCChhhHHHHHHHHHHHHHhc-ccceeeeeecc--------cCCCcc
Q 002809 568 NNFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH-HRNLTSLVGHC--------DEDNQT 636 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~-H~nIv~l~g~~--------~~~~~~ 636 (878)
+.+.+.||+|+||.||+++. .++.||||++........+.+.+|+.++.++. ||||+++++++ ......
T Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 45678999999999999998 45889999998777777788999999999996 99999999988 344457
Q ss_pred eeEeeeccCCChhhhhcccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCccEEEcCCCcEEEeecCCc
Q 002809 637 ALIYEFMANGNLQEYLSDIS-KKVLSSQERLRIAVESAQGLEYLHNGCKPP--IVHRDVKSTNILLNEKLQAKLADFGLS 713 (878)
Q Consensus 637 ~lV~Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDLKp~NILl~~~~~~kL~DFGla 713 (878)
++|+||+. |+|.+++.... ...+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 89999995 79999886532 45699999999999999999999988 6 999999999999999999999999999
Q ss_pred cccccCCCCc----------ccccccCCCCccCcccc---ccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 002809 714 KSFATDANTH----------VSTVVAGTPGYLDPEYY---TSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIR 780 (878)
Q Consensus 714 ~~~~~~~~~~----------~~~~~~gt~~Y~APE~~---~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 780 (878)
+......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----- 260 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----- 260 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-----
Confidence 8764322111 11134589999999998 56678999999999999999999999997533211
Q ss_pred HHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 781 QWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 781 ~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
... +.. ...........+.+++.+||+.+|++||+++|+++.|+++....
T Consensus 261 -~~~-----~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 261 -IVN-----GKY--------SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -----------C--------CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -hhc-----Ccc--------cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 000 000 00001111224678999999999999999999999999987653
No 113
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6.4e-37 Score=331.83 Aligned_cols=264 Identities=18% Similarity=0.270 Sum_probs=205.4
Q ss_pred hhhcccccccccEEEEEEEE--cceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecc-cCCCcceeEeeecc
Q 002809 568 NNFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHC-DEDNQTALIYEFMA 644 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~-~~~~~~~lV~Ey~~ 644 (878)
+.+.+.||+|+||.||+|+. .++.||||++..... ...+.+|++++.+++|++++..+..+ ...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred eEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-
Confidence 45678999999999999996 348899998765432 24688999999999988887777666 6667789999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE---cCCCcEEEeecCCccccccCCC
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL---NEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~~ 721 (878)
+++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 88 ~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 88 GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 99999998742 45699999999999999999999998 99999999999999 7899999999999987644322
Q ss_pred C-----cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHHHHHhcCCcccc
Q 002809 722 T-----HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHI-RQWVNSLIAKGDIKSI 795 (878)
Q Consensus 722 ~-----~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l-~~~v~~~~~~~~~~~i 795 (878)
. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........... ......... .....
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~- 241 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TPIEV- 241 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-SCHHH-
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc-chhhh-
Confidence 1 122345799999999999999999999999999999999999999987543221111 111111111 11000
Q ss_pred cCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002809 796 VDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARA 848 (878)
Q Consensus 796 id~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~ 848 (878)
+ .......+.+++.+||+.+|++||++++|++.|+++........
T Consensus 242 ~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~ 286 (296)
T 4hgt_A 242 L--------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp H--------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCT
T ss_pred h--------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 0 01112468899999999999999999999999999887655443
No 114
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=350.74 Aligned_cols=255 Identities=27% Similarity=0.500 Sum_probs=195.7
Q ss_pred hhcccccccccEEEEEEEEcc-----eeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeeccc-CCCcceeEee
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-----IDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCD-EDNQTALIYE 641 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-----~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~-~~~~~~lV~E 641 (878)
.+.+.||+|+||.||+|+..+ ..||||.+... .....+.|.+|+.++++++||||++++++|. .++..++|||
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e 171 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 171 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence 456789999999999998632 45899998754 3455688999999999999999999999865 4567899999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.++++. ....+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 172 ~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 172 YMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp CCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 9999999999975 345688999999999999999999998 999999999999999999999999999986643221
Q ss_pred C--cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCC
Q 002809 722 T--HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDP 798 (878)
Q Consensus 722 ~--~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~ 798 (878)
. .......+++.|+|||.+.+..++.++|||||||++|||+| |.+||......+. ... +..+.. ..
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~---~~~----~~~~~~--~~-- 316 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI---TVY----LLQGRR--LL-- 316 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH---HHH----HHTTCC--CC--
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH---HHH----HHcCCC--CC--
Confidence 1 11233457789999999999999999999999999999999 6788876544321 111 111211 00
Q ss_pred ccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 799 RLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 799 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
.+......+.+++.+||+.+|++||+++|+++.|++++..
T Consensus 317 -----~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 317 -----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1112334688999999999999999999999999998743
No 115
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=341.88 Aligned_cols=250 Identities=16% Similarity=0.205 Sum_probs=203.7
Q ss_pred hhhcccccccccEEEEEEE-------EcceeEEEEEeccCChhhHHHHHHHHHHHHHhc---ccceeeeeecccCCCcce
Q 002809 568 NNFERTLGKGGFGTVYYGR-------LNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH---HRNLTSLVGHCDEDNQTA 637 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~-------~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~---H~nIv~l~g~~~~~~~~~ 637 (878)
+.+.+.||+|+||.||+|+ ..++.||||++..... .++..|++++.+++ |+||+++++++..++..+
T Consensus 67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~ 143 (365)
T 3e7e_A 67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV 143 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence 3456789999999999994 2347899999976543 46777888887776 999999999999999999
Q ss_pred eEeeeccCCChhhhhccc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC-----------CC
Q 002809 638 LIYEFMANGNLQEYLSDI---SKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE-----------KL 703 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~-----------~~ 703 (878)
+||||+++|+|.+++... ....+++..++.++.||++||+|||+. +|+||||||+|||++. ++
T Consensus 144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CT
T ss_pred EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccC
Confidence 999999999999999753 246799999999999999999999998 9999999999999998 89
Q ss_pred cEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 002809 704 QAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWV 783 (878)
Q Consensus 704 ~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v 783 (878)
.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------- 292 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-------- 292 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE--------
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc--------
Confidence 999999999987643333444455679999999999999999999999999999999999999986532211
Q ss_pred HHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHHHHHHHH
Q 002809 784 NSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQR-PTMSQVVMELSECLAAE 844 (878)
Q Consensus 784 ~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Psm~evl~~L~~~~~~e 844 (878)
..+...+.... ....+.+++..|++.+|.+| |+++++.+.|++.+...
T Consensus 293 ----------~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 ----------CKPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ----------EEECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ----------eeechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 00111111111 13356688899999999998 68889999999988653
No 116
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.1e-36 Score=330.26 Aligned_cols=263 Identities=19% Similarity=0.277 Sum_probs=205.3
Q ss_pred hhcccccccccEEEEEEEE--cceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecc-cCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHC-DEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~-~~~~~~~lV~Ey~~~ 645 (878)
.+.+.||+|+||.||+|+. .++.||||++..... .+.+.+|+.++.+++|++++..+.++ ..+...++||||+ +
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (296)
T 3uzp_A 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-G 88 (296)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-C
Confidence 4568999999999999996 458999999876543 24688999999999998877766665 5667789999999 9
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE---cCCCcEEEeecCCccccccCCCC
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL---NEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
++|.+++... ...+++..++.++.|+++||+|||++ +|+||||||+|||+ +.++.+||+|||+++........
T Consensus 89 ~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 89 PSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 9999999742 45699999999999999999999998 99999999999999 48889999999999876443221
Q ss_pred -----cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHHHHHhcCCccccc
Q 002809 723 -----HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIH-IRQWVNSLIAKGDIKSIV 796 (878)
Q Consensus 723 -----~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~v~~~~~~~~~~~ii 796 (878)
.......|++.|+|||.+.+..++.++|||||||++|||++|+.||.......... +......... .....
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 241 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TPIEV-- 241 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-SCHHH--
T ss_pred cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC-CchHH--
Confidence 11234579999999999999999999999999999999999999998644321111 1111111111 11000
Q ss_pred CCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002809 797 DPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARA 848 (878)
Q Consensus 797 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~ 848 (878)
+ .......+.+++.+||+.+|++||++++|++.|+++........
T Consensus 242 ---~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 286 (296)
T 3uzp_A 242 ---L----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp ---H----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred ---H----HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcc
Confidence 0 01122468899999999999999999999999999886654433
No 117
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.2e-37 Score=371.59 Aligned_cols=250 Identities=26% Similarity=0.447 Sum_probs=202.3
Q ss_pred ccccccccEEEEEEEEc----ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 572 RTLGKGGFGTVYYGRLN----EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~----~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.||+|+||.||+|.+. ++.||||+++... ....++|.+|+++|.+++|||||+++++|.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 3779999997643 3346789999999999999999999999964 468899999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC-cc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT-HV 724 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~ 724 (878)
|+|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+...... ..
T Consensus 454 g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 999999975 56799999999999999999999998 9999999999999999999999999999876433221 12
Q ss_pred cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 725 STVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 725 ~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+. ...+..+... .
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-------~~~i~~~~~~---------~ 592 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-------TAMLEKGERM---------G 592 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-------HHHHHTTCCC---------C
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-------HHHHHcCCCC---------C
Confidence 233456788999999999999999999999999999999 9999987765432 1222222211 1
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
.+..+..++.+++..||+.+|++||++++|++.|+++...
T Consensus 593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 593 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 1223345788999999999999999999999999987643
No 118
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2e-37 Score=341.93 Aligned_cols=260 Identities=25% Similarity=0.417 Sum_probs=206.5
Q ss_pred HhhhcccccccccEEEEEEEEc-------ceeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCccee
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN-------EIDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~-------~~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l 638 (878)
.+.+.+.||+|+||.||+|+.. +..||||++... .......+.+|+.++.+++||||+++++++......++
T Consensus 31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (327)
T 2yfx_A 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 110 (327)
T ss_dssp GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEE
Confidence 3456789999999999999843 357999999754 34456789999999999999999999999999999999
Q ss_pred EeeeccCCChhhhhccccC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC---CCcEEEeec
Q 002809 639 IYEFMANGNLQEYLSDISK-----KVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE---KLQAKLADF 710 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~---~~~~kL~DF 710 (878)
||||+++|+|.+++..... ..+++..++.++.|+++||.|||+. +|+||||||+|||++. +..+||+||
T Consensus 111 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 111 LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp EEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECcc
Confidence 9999999999999976432 4589999999999999999999998 9999999999999994 456999999
Q ss_pred CCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhc
Q 002809 711 GLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAK 789 (878)
Q Consensus 711 Gla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~ 789 (878)
|+++...............|++.|+|||.+.+..++.++||||||+++|||+| |+.||......+. .+ .+..
T Consensus 188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~----~~~~ 260 (327)
T 2yfx_A 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV---LE----FVTS 260 (327)
T ss_dssp HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH---HH----HHHT
T ss_pred ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHH---HH----HHhc
Confidence 99876543333233334567899999999998899999999999999999998 9999987654331 11 1122
Q ss_pred CCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 790 GDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 790 ~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
+... ..+......+.+++.+||+.+|++||++.++++.|+.+.....
T Consensus 261 ~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 261 GGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp TCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred CCCC---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 2111 1112223467899999999999999999999999998776543
No 119
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=341.18 Aligned_cols=264 Identities=25% Similarity=0.411 Sum_probs=195.9
Q ss_pred hhcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHH--HHHhcccceeeeeecc-----cCCCcceeEee
Q 002809 569 NFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKL--LMRVHHRNLTSLVGHC-----DEDNQTALIYE 641 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~--L~~l~H~nIv~l~g~~-----~~~~~~~lV~E 641 (878)
.+.+.||+|+||.||+|+..++.||||++..... ..+..|.++ +..++||||+++++.+ ......++|||
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e 92 (336)
T 3g2f_A 16 KLLELIGRGRYGAVYKGSLDERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVME 92 (336)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEEC
T ss_pred heeeecccCCCeEEEEEEECCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEe
Confidence 4568999999999999999999999999975432 344444444 4558999999999743 33446789999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEecCCCCccEEEcCCCcEEEeecCCccc
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGC------KPPIVHRDVKSTNILLNEKLQAKLADFGLSKS 715 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~ 715 (878)
|+++|+|.+++.. ...++..++.++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 93 YYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp CCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence 9999999999964 34589999999999999999999763 33899999999999999999999999999987
Q ss_pred cccCCC------CcccccccCCCCccCcccccc-------CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHH-----
Q 002809 716 FATDAN------THVSTVVAGTPGYLDPEYYTS-------NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKI----- 777 (878)
Q Consensus 716 ~~~~~~------~~~~~~~~gt~~Y~APE~~~~-------~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~----- 777 (878)
+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.|+.........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~ 249 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence 643211 112224569999999999986 45677999999999999999997665432211000
Q ss_pred -------HHHHHHHHHHhcCCcccccCCccccc--cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 778 -------HIRQWVNSLIAKGDIKSIVDPRLQED--FDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 778 -------~l~~~v~~~~~~~~~~~iid~~l~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
...+ .......... .+.+... ........+.+++.+||+.+|++|||++|+++.|++++..
T Consensus 250 ~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 250 TEVGNHPTFED-MQVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp HHHCSSCCHHH-HHHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cccCCCchHHH-HHhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 0001 1111111111 1111111 1234566799999999999999999999999999998844
No 120
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1e-36 Score=327.60 Aligned_cols=248 Identities=25% Similarity=0.377 Sum_probs=203.9
Q ss_pred HhhhcccccccccEEEEEEEEcc--eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 567 TNNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.+.||+|+||.||+|+..+ ..||+|++........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT 89 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence 35567899999999999999865 6799999987655667889999999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE---cCCCcEEEeecCCccccccCCC
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL---NEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~~ 721 (878)
+++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++.......
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~- 163 (277)
T 3f3z_A 90 GGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK- 163 (277)
T ss_dssp SCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-
Confidence 9999999876 45699999999999999999999998 99999999999999 788999999999998764332
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
......||+.|+|||.+.+. ++.++||||||++++||++|+.||......+.. ..+.++... ..
T Consensus 164 --~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-------~~~~~~~~~------~~ 227 (277)
T 3f3z_A 164 --MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVM-------LKIREGTFT------FP 227 (277)
T ss_dssp --CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHCCCC------CC
T ss_pred --chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHH-------HHHHhCCCC------CC
Confidence 22345699999999998764 899999999999999999999999876653311 111122110 00
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
..........+.+++.+||+.+|++||++.|+++.
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000123467899999999999999999999873
No 121
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6.6e-37 Score=331.60 Aligned_cols=257 Identities=22% Similarity=0.358 Sum_probs=197.7
Q ss_pred hhcccccccccEEEEEEEEc-ceeEEEEEeccCCh--hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRLN-EIDVAVKMLSSSSA--QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~-~~~vAvK~l~~~~~--~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
.+.+.||+|+||.||+|+.. ++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++||||+++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (288)
T 1ob3_A 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred hhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC
Confidence 45688999999999999986 48899999875432 2346788999999999999999999999999999999999975
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 85 -~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~ 157 (288)
T 1ob3_A 85 -DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--RKY 157 (288)
T ss_dssp -EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred -CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc--ccc
Confidence 999988753 35689999999999999999999998 99999999999999999999999999997653221 122
Q ss_pred ccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC---ccc-----cc
Q 002809 726 TVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD---IKS-----IV 796 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~---~~~-----ii 796 (878)
....||+.|+|||++.+ ..++.++|||||||+++||++|++||......+.. .... ....... ... ..
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL--MRIF-RILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHH-HHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHH-HHHCCCChhhchhhhccccc
Confidence 33468999999999876 45899999999999999999999999876654321 1111 1111110 000 01
Q ss_pred CCccc-------cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 797 DPRLQ-------EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 797 d~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
++.+. ..........+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11111 1111223456789999999999999999999976
No 122
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.4e-37 Score=343.01 Aligned_cols=257 Identities=21% Similarity=0.261 Sum_probs=201.7
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhc-----ccceeeeeecccCCCcceeEe
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH-----HRNLTSLVGHCDEDNQTALIY 640 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~-----H~nIv~l~g~~~~~~~~~lV~ 640 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... ....+.+..|++++.+++ ||||+++++++...+..++||
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~ 115 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIF 115 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEE
T ss_pred EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEE
Confidence 455689999999999999984 488999999753 344567888999999997 999999999999999999999
Q ss_pred eeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC-------------------
Q 002809 641 EFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE------------------- 701 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~------------------- 701 (878)
||+ +++|.+++.......+++..++.++.||+.||+|||+. +|+||||||+|||++.
T Consensus 116 e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 116 EPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp CCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred cCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 999 99999999876556799999999999999999999998 9999999999999975
Q ss_pred ------CCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHH
Q 002809 702 ------KLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEE 775 (878)
Q Consensus 702 ------~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~ 775 (878)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 266 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME 266 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred cccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHH
Confidence 789999999999864322 223568999999999999999999999999999999999999998766544
Q ss_pred HHHHHHHH---------HHHHhcCCcccccC-Cccc----cccC----------------HHHHHHHHHHHHHccCCCCC
Q 002809 776 KIHIRQWV---------NSLIAKGDIKSIVD-PRLQ----EDFD----------------ANSVWKAVELAMACLSPTGN 825 (878)
Q Consensus 776 ~~~l~~~v---------~~~~~~~~~~~iid-~~l~----~~~~----------------~~~~~~l~~l~~~Cl~~dP~ 825 (878)
........ ....... ....++ ..+. .... ......+.+++.+||+.||+
T Consensus 267 ~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 345 (360)
T 3llt_A 267 HLAMMESIIQPIPKNMLYEATKTN-GSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPT 345 (360)
T ss_dssp HHHHHHHHTCCCCHHHHHHHTTSG-GGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHhhhhhcc-CccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChh
Confidence 32221111 0000000 000000 0000 0000 00114677999999999999
Q ss_pred CCCCHHHHHH
Q 002809 826 QRPTMSQVVM 835 (878)
Q Consensus 826 ~RPsm~evl~ 835 (878)
+|||++|+++
T Consensus 346 ~Rpta~elL~ 355 (360)
T 3llt_A 346 LRPSPAELLK 355 (360)
T ss_dssp GSCCHHHHTT
T ss_pred hCCCHHHHhc
Confidence 9999999975
No 123
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.7e-37 Score=344.01 Aligned_cols=243 Identities=24% Similarity=0.370 Sum_probs=200.7
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEeee
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
.+.+.||+|+||.||+++.. ++.||+|++.+.. ....+.+..|..++.++ +||||+++++++...+..++||||
T Consensus 20 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~ 99 (345)
T 1xjd_A 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEY 99 (345)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeC
Confidence 45689999999999999986 4889999997542 23356788899999987 899999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 172 (345)
T 1xjd_A 100 LNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD-- 172 (345)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC--
Confidence 999999999976 45699999999999999999999998 99999999999999999999999999997543221
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
......+||+.|+|||++.+..++.++|||||||++|||++|++||...+..+.. . .+..+. +.+.
T Consensus 173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~------~-~i~~~~------~~~p- 238 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF------H-SIRMDN------PFYP- 238 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------H-HHHHCC------CCCC-
T ss_pred CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH------H-HHHhCC------CCCC-
Confidence 2234567999999999999999999999999999999999999999876653321 1 111111 1111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMS-QVVM 835 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~-evl~ 835 (878)
......+.+++.+||+.+|++||++. ++++
T Consensus 239 ---~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 239 ---RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ---cccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 11234678999999999999999997 6653
No 124
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.1e-37 Score=339.53 Aligned_cols=255 Identities=22% Similarity=0.387 Sum_probs=195.2
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC---ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcc----ee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS---SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQT----AL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~----~l 638 (878)
+.+.+.||+|+||.||+++.. ++.||||++... .......+.+|++++.+++||||+++++++...... ++
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~l 93 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEE
Confidence 455789999999999999964 488999999764 334456889999999999999999999998766544 99
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccccc
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~ 718 (878)
||||+++|+|.++++. ...+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 94 v~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 94 VMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 9999999999999975 45699999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCC-cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccC
Q 002809 719 DANT-HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVD 797 (878)
Q Consensus 719 ~~~~-~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid 797 (878)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ............
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~------~~~~~~~~~~~~--- 239 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV------AYQHVREDPIPP--- 239 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------HHHHHHCCCCCH---
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHhcCCCCCc---
Confidence 3221 122335689999999999999999999999999999999999999987665331 111122111110
Q ss_pred CccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH-HHHHH
Q 002809 798 PRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM-ELSEC 840 (878)
Q Consensus 798 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~-~L~~~ 840 (878)
..........+.+++.+||+.+|++||++.++++ .|.++
T Consensus 240 ----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 240 ----SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ----HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ----ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0001112346789999999999999997776654 44443
No 125
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.6e-37 Score=331.65 Aligned_cols=258 Identities=21% Similarity=0.309 Sum_probs=196.6
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 84 (292)
T 3o0g_A 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84 (292)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC
Confidence 45688999999999999985 4789999997543 3345788999999999999999999999999999999999997
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHV 724 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 724 (878)
+ +|.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 85 ~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 157 (292)
T 3o0g_A 85 Q-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--RC 157 (292)
T ss_dssp E-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--SC
T ss_pred C-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--cc
Confidence 5 56555543 245699999999999999999999998 99999999999999999999999999998764222 22
Q ss_pred cccccCCCCccCccccccCC-CCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC---ccccc---C
Q 002809 725 STVVAGTPGYLDPEYYTSNR-LTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD---IKSIV---D 797 (878)
Q Consensus 725 ~~~~~gt~~Y~APE~~~~~~-~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~---~~~ii---d 797 (878)
.....||+.|+|||++.+.. ++.++|||||||+++||++|+.|+........ .+.... ....... ..... +
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~-~~~~i~-~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIF-RLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHHHH-HHHCCCCTTTCTTGGGSTT
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHH-HHhCCCChhhhhhhccccc
Confidence 23456899999999998765 79999999999999999998877544332221 111111 1111110 00000 0
Q ss_pred C---------ccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 798 P---------RLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 798 ~---------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
. .............+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0000111223457789999999999999999999986
No 126
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=335.28 Aligned_cols=261 Identities=25% Similarity=0.354 Sum_probs=199.9
Q ss_pred HHhhhcccccccccEEEEEEEEc--ceeEEEEEeccCC-----hhhHHHHHHHHHHHHHhc---ccceeeeeecccCCC-
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-----AQGFQQFQAEVKLLMRVH---HRNLTSLVGHCDEDN- 634 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-----~~~~~~f~~Ei~~L~~l~---H~nIv~l~g~~~~~~- 634 (878)
..+.+.+.||+|+||.||+|+.. ++.||||++.... ......+.+|++++++++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 34556789999999999999964 4889999987432 112356777888777775 999999999987654
Q ss_pred ----cceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeec
Q 002809 635 ----QTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADF 710 (878)
Q Consensus 635 ----~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DF 710 (878)
..++||||+. |+|.+++.......+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeC
Confidence 4789999996 6999999876666699999999999999999999998 9999999999999999999999999
Q ss_pred CCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcC
Q 002809 711 GLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKG 790 (878)
Q Consensus 711 Gla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~ 790 (878)
|+++...... ......||+.|+|||++.+..++.++|||||||+++||++|++||......+... ... ......
T Consensus 165 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--~i~-~~~~~~ 238 (308)
T 3g33_A 165 GLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG--KIF-DLIGLP 238 (308)
T ss_dssp SCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHH--HHH-HHHCCC
T ss_pred ccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHH-HHhCCC
Confidence 9998653322 2234568999999999999999999999999999999999999998776543221 111 111111
Q ss_pred ---CcccccC-C--ccc-------cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 791 ---DIKSIVD-P--RLQ-------EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 791 ---~~~~iid-~--~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
....... + .+. .....+....+.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000000 0 000 00111233577899999999999999999999863
No 127
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9e-37 Score=335.59 Aligned_cols=259 Identities=25% Similarity=0.401 Sum_probs=192.1
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
.+.+.||+|+||.||+|+.. ++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~- 86 (317)
T 2pmi_A 8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD- 86 (317)
T ss_dssp -----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-
T ss_pred eEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-
Confidence 45678999999999999875 4889999987543 2345778999999999999999999999999999999999998
Q ss_pred CChhhhhcccc----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 646 GNLQEYLSDIS----KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 646 gsL~~~l~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 163 (317)
T 2pmi_A 87 NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN 163 (317)
T ss_dssp CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence 69999986532 24689999999999999999999998 999999999999999999999999999987643221
Q ss_pred CcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC---cccc--
Q 002809 722 THVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD---IKSI-- 795 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~---~~~i-- 795 (878)
......||+.|+|||++.+ ..++.++|||||||++|||++|++||......+.... +........ ...+
T Consensus 164 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 164 --TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL---IFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp --CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCSCCTTTCGGGGG
T ss_pred --cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHHHhCCCChhHhhhhhh
Confidence 2233568999999999976 4689999999999999999999999987765432211 111111000 0000
Q ss_pred ---cCCccc------------cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 796 ---VDPRLQ------------EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 796 ---id~~l~------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
..+.+. ..........+.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000 00011223468899999999999999999999863
No 128
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.5e-37 Score=351.76 Aligned_cols=249 Identities=23% Similarity=0.339 Sum_probs=200.5
Q ss_pred hcccccccccEEEEEEEEcc--eeEEEEEeccCCh---hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 570 FERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSSA---QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~~---~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
+.+.||+|+||.||+++... +.||+|++.+... .....+.+|+.++.+++||||++++++|.+++..++||||++
T Consensus 78 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 45799999999999999864 7899999975321 223458899999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHV 724 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 724 (878)
+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 158 gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~-~~~ 232 (437)
T 4aw2_A 158 GGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-TVQ 232 (437)
T ss_dssp TCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-CEE
T ss_pred CCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC-Ccc
Confidence 99999999752 45699999999999999999999998 99999999999999999999999999998764332 223
Q ss_pred cccccCCCCccCccccc-----cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHHHHHhcCCcccccCC
Q 002809 725 STVVAGTPGYLDPEYYT-----SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIH-IRQWVNSLIAKGDIKSIVDP 798 (878)
Q Consensus 725 ~~~~~gt~~Y~APE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~v~~~~~~~~~~~iid~ 798 (878)
....+||+.|+|||++. ...++.++|||||||++|||++|++||...+..+... +..+. ..-.. +
T Consensus 233 ~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~----~~~~~-----p 303 (437)
T 4aw2_A 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK----ERFQF-----P 303 (437)
T ss_dssp CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH----HHCCC-----C
T ss_pred cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc----ccccC-----C
Confidence 34467999999999987 5678999999999999999999999998766543211 11110 00011 1
Q ss_pred ccccccCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002809 799 RLQEDFDANSVWKAVELAMACLSPTGNQ--RPTMSQVVME 836 (878)
Q Consensus 799 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPsm~evl~~ 836 (878)
... .....++.+++.+||+.+|++ ||+++|+++.
T Consensus 304 ~~~----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 304 TQV----TDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp SSC----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ccc----ccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 110 112346778999999988888 9999999874
No 129
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.2e-37 Score=338.72 Aligned_cols=247 Identities=21% Similarity=0.357 Sum_probs=193.8
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCC----------
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN---------- 634 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~---------- 634 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 8 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3qd2_B 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDE 87 (332)
T ss_dssp EEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC
T ss_pred CceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhh
Confidence 445689999999999999985 4889999997543 345678999999999999999999999885443
Q ss_pred -----------------------------------------------cceeEeeeccCCChhhhhcccc-CCCCCHHHHH
Q 002809 635 -----------------------------------------------QTALIYEFMANGNLQEYLSDIS-KKVLSSQERL 666 (878)
Q Consensus 635 -----------------------------------------------~~~lV~Ey~~~gsL~~~l~~~~-~~~l~~~~~~ 666 (878)
..++||||+++|+|.+++.... ....++..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 167 (332)
T 3qd2_B 88 IWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL 167 (332)
T ss_dssp --------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHH
T ss_pred hhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHH
Confidence 2789999999999999997643 3456777899
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC----------cccccccCCCCccC
Q 002809 667 RIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT----------HVSTVVAGTPGYLD 736 (878)
Q Consensus 667 ~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~----------~~~~~~~gt~~Y~A 736 (878)
.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ .......||+.|+|
T Consensus 168 ~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 9999999999999998 9999999999999999999999999999876443211 12233569999999
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHH
Q 002809 737 PEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELA 816 (878)
Q Consensus 737 PE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~ 816 (878)
||++.+..++.++|||||||+++||++|..|+.. .... .......... .........+.+++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~----~~~~~~~~~~---------~~~~~~~~~~~~li 306 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRI----ITDVRNLKFP---------LLFTQKYPQEHMMV 306 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHH----HHHHHTTCCC---------HHHHHHCHHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHH----HHHhhccCCC---------cccccCChhHHHHH
Confidence 9999999999999999999999999998876421 1111 1111111111 01122334668899
Q ss_pred HHccCCCCCCCCCHHHHHH
Q 002809 817 MACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 817 ~~Cl~~dP~~RPsm~evl~ 835 (878)
.+||+.+|++||+++|+++
T Consensus 307 ~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 307 QDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHCSSGGGSCCHHHHHH
T ss_pred HHHccCCCCcCCCHHHHhh
Confidence 9999999999999999986
No 130
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.1e-37 Score=341.43 Aligned_cols=241 Identities=22% Similarity=0.310 Sum_probs=201.8
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.||+|+||.||+++.. ++.||+|++.... ....+.+.+|++++.+++||||+++++++...+..++||||+
T Consensus 44 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 123 (350)
T 1rdq_E 44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123 (350)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCC
Confidence 45689999999999999985 4889999987542 233567889999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++|+|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 ~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~---- 194 (350)
T 1rdq_E 124 AGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194 (350)
T ss_dssp TTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC----
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC----
Confidence 99999999976 45699999999999999999999998 9999999999999999999999999999866322
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
....+||+.|+|||++.+..++.++|||||||++|||++|++||......+. . ..+..+.. .+
T Consensus 195 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~------~-~~i~~~~~------~~--- 257 (350)
T 1rdq_E 195 -TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI------Y-EKIVSGKV------RF--- 257 (350)
T ss_dssp -BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------H-HHHHHCCC------CC---
T ss_pred -cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH------H-HHHHcCCC------CC---
Confidence 2235799999999999999999999999999999999999999987654331 1 11222221 11
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPT-----MSQVVME 836 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPs-----m~evl~~ 836 (878)
+......+.+++.+||+.+|++||+ ++||++.
T Consensus 258 -p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 258 -PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1122346789999999999999998 8888764
No 131
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=9.3e-37 Score=337.15 Aligned_cols=245 Identities=27% Similarity=0.389 Sum_probs=192.2
Q ss_pred hhhcccccccccEEEEEEEE-----cceeEEEEEeccCC----hhhHHHHHHHHHHHHHhcccceeeeeecccCCCccee
Q 002809 568 NNFERTLGKGGFGTVYYGRL-----NEIDVAVKMLSSSS----AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~-----~~~~vAvK~l~~~~----~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l 638 (878)
+.+.+.||+|+||.||+++. .++.||+|++.... ......+.+|++++++++||||+++++++..++..++
T Consensus 19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 98 (327)
T 3a62_A 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYL 98 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEE
Confidence 45678999999999999987 34889999997642 2344668899999999999999999999999999999
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccccc
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~ 718 (878)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 99 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 99 ILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 9999999999999975 45689999999999999999999998 999999999999999999999999999875432
Q ss_pred CCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCC
Q 002809 719 DANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDP 798 (878)
Q Consensus 719 ~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~ 798 (878)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .... .+..
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~------~~i~-~~~~------ 238 (327)
T 3a62_A 174 DG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI------DKIL-KCKL------ 238 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHHH-HTCC------
T ss_pred CC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH------HHHH-hCCC------
Confidence 21 1223457999999999999999999999999999999999999999876543311 1111 1111
Q ss_pred ccccccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002809 799 RLQEDFDANSVWKAVELAMACLSPTGNQRP-----TMSQVVME 836 (878)
Q Consensus 799 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----sm~evl~~ 836 (878)
.+ +......+.+++.+||+.+|++|| +++|+++.
T Consensus 239 ~~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 NL----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp CC----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred CC----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 11 112234678999999999999999 67787763
No 132
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=8.4e-37 Score=341.10 Aligned_cols=245 Identities=23% Similarity=0.346 Sum_probs=200.9
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCC---hhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSS---AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
+.+.+.||+|+||.||+++... +.||+|++.+.. ....+.+..|..++..+ +||||+++++++...+..++|||
T Consensus 22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E 101 (353)
T 2i0e_A 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 101 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEe
Confidence 3456899999999999999865 779999997542 23456788999999988 79999999999999999999999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 102 ~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 175 (353)
T 2i0e_A 102 YVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG- 175 (353)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC-
Confidence 9999999999975 45699999999999999999999998 99999999999999999999999999998542221
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
......+||+.|+|||++.+..++.++|||||||++|||++|++||...+..+. .... ..+.. .
T Consensus 176 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~------~~~i-~~~~~------~-- 239 (353)
T 2i0e_A 176 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL------FQSI-MEHNV------A-- 239 (353)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHH-HHCCC------C--
T ss_pred -cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH------HHHH-HhCCC------C--
Confidence 223446799999999999999999999999999999999999999987654331 1111 11211 1
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPT-----MSQVVME 836 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----m~evl~~ 836 (878)
++.....++.+++.+||+.+|++||+ ++|+++.
T Consensus 240 --~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 --YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp --CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred --CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11122346789999999999999996 4666653
No 133
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.2e-37 Score=339.37 Aligned_cols=253 Identities=28% Similarity=0.490 Sum_probs=203.4
Q ss_pred hhcccccccccEEEEEEEEcc--e--eEEEEEeccC-ChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEeee
Q 002809 569 NFERTLGKGGFGTVYYGRLNE--I--DVAVKMLSSS-SAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~--~--~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
.+.+.||+|+||.||+++... . .+|+|.+... .....+.+.+|++++.++ +||||+++++++...+..++||||
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~ 107 (327)
T 1fvr_A 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 107 (327)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred cceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEec
Confidence 567899999999999998753 4 4599988754 333456789999999999 899999999999999999999999
Q ss_pred ccCCChhhhhcccc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEe
Q 002809 643 MANGNLQEYLSDIS--------------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLA 708 (878)
Q Consensus 643 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~ 708 (878)
+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kL~ 184 (327)
T 1fvr_A 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIA 184 (327)
T ss_dssp CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEEC
T ss_pred CCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEEEc
Confidence 99999999997632 34799999999999999999999998 99999999999999999999999
Q ss_pred ecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHH
Q 002809 709 DFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLI 787 (878)
Q Consensus 709 DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~ 787 (878)
|||+++..... .......++..|+|||.+.+..++.++|||||||+++||+| |+.||......+. . ..+
T Consensus 185 Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~------~-~~~ 254 (327)
T 1fvr_A 185 DFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL------Y-EKL 254 (327)
T ss_dssp CTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH------H-HHG
T ss_pred ccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH------H-HHh
Confidence 99998743221 11223457889999999998889999999999999999998 9999987654331 1 112
Q ss_pred hcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 788 AKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 788 ~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
..+.. . ..+......+.+++.+||+.+|++||+++|+++.|++++..
T Consensus 255 ~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 255 PQGYR-----L----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp GGTCC-----C----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred hcCCC-----C----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 22210 0 11122334688999999999999999999999999998864
No 134
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.9e-36 Score=331.30 Aligned_cols=263 Identities=22% Similarity=0.380 Sum_probs=199.3
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC---ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS---SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 113 (310)
T 2wqm_A 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL 113 (310)
T ss_dssp EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEec
Confidence 456789999999999999864 588999998753 344567899999999999999999999999999999999999
Q ss_pred ccCCChhhhhccc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCC
Q 002809 643 MANGNLQEYLSDI--SKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDA 720 (878)
Q Consensus 643 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~ 720 (878)
+++|+|.+++... ....+++..++.++.|+++||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~ 190 (310)
T 2wqm_A 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190 (310)
T ss_dssp CCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred CCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence 9999999998653 256689999999999999999999998 99999999999999999999999999987653322
Q ss_pred CCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 721 NTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 721 ~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
.......|+..|+|||.+.+..++.++||||||++++||++|+.||....... ..... .+..+......
T Consensus 191 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~-~~~~~~~~~~~---- 259 (310)
T 2wqm_A 191 --TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----YSLCK-KIEQCDYPPLP---- 259 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH----HHHHH-HHHTTCSCCCC----
T ss_pred --ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH----HHHHH-HhhcccCCCCc----
Confidence 12233468999999999999999999999999999999999999997543211 11111 12222211111
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARA 848 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~ 848 (878)
.......+.+++.+||+.||++||++++|++.|+++...+...-
T Consensus 260 ----~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 260 ----SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp ----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred ----ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 11123467899999999999999999999999999877654443
No 135
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.9e-37 Score=330.72 Aligned_cols=249 Identities=24% Similarity=0.406 Sum_probs=204.1
Q ss_pred HHHHHhhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccC--------
Q 002809 563 VVKITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDE-------- 632 (878)
Q Consensus 563 l~~~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-------- 632 (878)
.....+.+.+.||+|+||.||+++.. ++.||+|++.... ..+.+|++++.+++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 33444566789999999999999986 5889999997654 357789999999999999999998753
Q ss_pred --------CCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc
Q 002809 633 --------DNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ 704 (878)
Q Consensus 633 --------~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~ 704 (878)
....++||||+++|+|.+++.......+++..++.++.|++.||.|||+. +|+||||||+|||++.++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCC
Confidence 44579999999999999999875567899999999999999999999998 9999999999999999999
Q ss_pred EEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH
Q 002809 705 AKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVN 784 (878)
Q Consensus 705 ~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~ 784 (878)
+||+|||++....... ......|++.|+|||.+.+..++.++||||||++++||++|..|+.... .+.
T Consensus 161 ~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~~~- 228 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS--------KFF- 228 (284)
T ss_dssp EEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--------HHH-
T ss_pred EEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH--------HHH-
Confidence 9999999998764332 1233468999999999999999999999999999999999998864211 111
Q ss_pred HHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 002809 785 SLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLA 842 (878)
Q Consensus 785 ~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~ 842 (878)
..+..+.+. ..+ ...+.+++.+||+.+|++||++.|+++.|+.+..
T Consensus 229 ~~~~~~~~~--------~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 229 TDLRDGIIS--------DIF----DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp HHHHTTCCC--------TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred HHhhccccc--------ccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 111222211 111 2356789999999999999999999999988653
No 136
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.5e-36 Score=327.11 Aligned_cols=255 Identities=23% Similarity=0.377 Sum_probs=204.2
Q ss_pred HHhhhcccccccccEEEEEEEEc--ceeEEEEEeccCCh------hhHHHHHHHHHHHHHhcccceeeeeecccCCCcce
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA------QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTA 637 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~ 637 (878)
-.+.+.+.||+|+||.||+++.. ++.||+|++..... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 34566789999999999999986 48899999875422 13578999999999999999999999999999999
Q ss_pred eEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC----cEEEeecCCc
Q 002809 638 LIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL----QAKLADFGLS 713 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~----~~kL~DFGla 713 (878)
+||||+++++|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 99999999999999975 45799999999999999999999998 999999999999998877 8999999999
Q ss_pred cccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcc
Q 002809 714 KSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIK 793 (878)
Q Consensus 714 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~ 793 (878)
....... ......|++.|+|||++.+..++.++||||||++++||++|+.||......+... .+.....
T Consensus 160 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------~~~~~~~- 228 (283)
T 3bhy_A 160 HKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT-------NISAVNY- 228 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-------HHHTTCC-
T ss_pred eeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHH-------HhHhccc-
Confidence 8664322 1223468999999999999999999999999999999999999998766533211 1111110
Q ss_pred cccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHHH
Q 002809 794 SIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME--LSECL 841 (878)
Q Consensus 794 ~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~--L~~~~ 841 (878)
.............+.+++.+||+.+|++||+++|+++. ++++.
T Consensus 229 -----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 229 -----DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp -----CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred -----CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 00000111223467899999999999999999999983 55543
No 137
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.9e-37 Score=341.93 Aligned_cols=246 Identities=23% Similarity=0.354 Sum_probs=186.5
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+|+..+ +.||||++.... ..+.+.+|++++.+++||||+++++++...+..++||||+++
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 132 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence 3456899999999999999864 779999998653 346788999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC---CCcEEEeecCCccccccCCCC
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE---KLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~---~~~~kL~DFGla~~~~~~~~~ 722 (878)
|+|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 133 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--- 204 (349)
T 2w4o_A 133 GELFDRIVE--KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--- 204 (349)
T ss_dssp CBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc---
Confidence 999999976 45699999999999999999999998 9999999999999975 889999999999865322
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....+..+... ...
T Consensus 205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~i~~~~~~-~~~----- 272 (349)
T 2w4o_A 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF------MFRRILNCEYY-FIS----- 272 (349)
T ss_dssp --------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH------HHHHHHTTCCC-CCT-----
T ss_pred cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH------HHHHHHhCCCc-cCC-----
Confidence 122345689999999999999999999999999999999999999976544321 11111121111 111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.........+.+++.+||+.||++||++.|+++
T Consensus 273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111123346789999999999999999999986
No 138
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.1e-37 Score=344.68 Aligned_cols=246 Identities=23% Similarity=0.353 Sum_probs=200.3
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+++... +.||+|++.... ....+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~ 96 (384)
T 4fr4_A 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDL 96 (384)
T ss_dssp EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEec
Confidence 3456899999999999998865 779999987542 23456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+.+|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 97 ~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--- 168 (384)
T 4fr4_A 97 LLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--- 168 (384)
T ss_dssp CTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT---
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC---
Confidence 999999999976 55799999999999999999999998 9999999999999999999999999999876432
Q ss_pred cccccccCCCCccCcccccc---CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCc
Q 002809 723 HVSTVVAGTPGYLDPEYYTS---NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~---~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
......+||+.|+|||++.. ..++.++|||||||++|||++|+.||..........+.... .....
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~----~~~~~------- 237 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF----ETTVV------- 237 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH----HHCCC-------
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH----hhccc-------
Confidence 22344679999999999874 45899999999999999999999999764433222221111 11110
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQRPT-MSQVVM 835 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-m~evl~ 835 (878)
.++......+.+++.+||+.+|++||+ ++++.+
T Consensus 238 ---~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 ---TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111222346889999999999999998 666654
No 139
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.5e-37 Score=340.96 Aligned_cols=243 Identities=24% Similarity=0.359 Sum_probs=199.2
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 90 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEEC
Confidence 345689999999999999974 4889999987532 12246789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+ +|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++.......
T Consensus 91 ~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-- 162 (336)
T 3h4j_B 91 A-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-- 162 (336)
T ss_dssp C-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--
T ss_pred C-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc--
Confidence 9 7899998875 45699999999999999999999998 99999999999999999999999999998664322
Q ss_pred cccccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRL-TEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
.....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... ....+....
T Consensus 163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---------------~~~~i~~~~-- 224 (336)
T 3h4j_B 163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN---------------LFKKVNSCV-- 224 (336)
T ss_dssp -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT---------------CBCCCCSSC--
T ss_pred -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH---------------HHHHHHcCC--
Confidence 2234579999999999988776 789999999999999999999997643221 001111100
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
...+......+.+++.+||+.||.+|||++|+++.
T Consensus 225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 01122233467899999999999999999999875
No 140
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.1e-37 Score=339.67 Aligned_cols=255 Identities=25% Similarity=0.371 Sum_probs=198.4
Q ss_pred HHhhhcccccccccEEEEEEEEcc--eeEEEEEeccC-----ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCccee
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSS-----SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~-----~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l 638 (878)
..+.+.+.||+|+||.||+|+... ..||+|++... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 105 (345)
T 3hko_A 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL 105 (345)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence 345567899999999999998754 78999998643 33456789999999999999999999999999999999
Q ss_pred EeeeccCCChhhhhcccc--------------------------------------CCCCCHHHHHHHHHHHHHHHHHHH
Q 002809 639 IYEFMANGNLQEYLSDIS--------------------------------------KKVLSSQERLRIAVESAQGLEYLH 680 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~qia~gL~yLH 680 (878)
||||+++|+|.+++.... ...+++..++.++.|+++||+|||
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999985211 122467788899999999999999
Q ss_pred hCCCCCeEecCCCCccEEEcCCC--cEEEeecCCccccccCCCC--cccccccCCCCccCcccccc--CCCCCccchhhH
Q 002809 681 NGCKPPIVHRDVKSTNILLNEKL--QAKLADFGLSKSFATDANT--HVSTVVAGTPGYLDPEYYTS--NRLTEKSDVYSF 754 (878)
Q Consensus 681 ~~~~~~ivHrDLKp~NILl~~~~--~~kL~DFGla~~~~~~~~~--~~~~~~~gt~~Y~APE~~~~--~~~t~ksDV~S~ 754 (878)
+. +|+||||||+|||++.++ .+||+|||+++.+...... .......||+.|+|||.+.+ ..++.++|||||
T Consensus 186 ~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl 262 (345)
T 3hko_A 186 NQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262 (345)
T ss_dssp HT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred HC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence 98 999999999999998776 8999999999876432211 12334569999999999975 678999999999
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002809 755 GVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVV 834 (878)
Q Consensus 755 Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl 834 (878)
||++|||++|+.||......+.. ........ ....+. .......+.+++.+||+.+|++||++.|++
T Consensus 263 G~il~el~~g~~pf~~~~~~~~~------~~~~~~~~--~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 263 GVLLHLLLMGAVPFPGVNDADTI------SQVLNKKL--CFENPN-----YNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHH------HHHHHCCC--CTTSGG-----GGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHCCCCCCCCChHHHH------HHHHhccc--ccCCcc-----cccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 99999999999999877654321 11111111 000011 111234678999999999999999999998
Q ss_pred HH
Q 002809 835 ME 836 (878)
Q Consensus 835 ~~ 836 (878)
+.
T Consensus 330 ~h 331 (345)
T 3hko_A 330 QH 331 (345)
T ss_dssp HS
T ss_pred cC
Confidence 73
No 141
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=344.88 Aligned_cols=268 Identities=22% Similarity=0.312 Sum_probs=209.7
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCC--cceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN--QTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~--~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 345689999999999999986 4889999997543 234577889999999999999999999987655 67999999
Q ss_pred ccCCChhhhhcccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE----cCCCcEEEeecCCccccc
Q 002809 643 MANGNLQEYLSDIS-KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL----NEKLQAKLADFGLSKSFA 717 (878)
Q Consensus 643 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl----~~~~~~kL~DFGla~~~~ 717 (878)
+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 99999999997643 23499999999999999999999998 99999999999999 788889999999998764
Q ss_pred cCCCCcccccccCCCCccCcccccc--------CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhc
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTS--------NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAK 789 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~--------~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~ 789 (878)
... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||......... .+........
T Consensus 168 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~--~~~~~~~~~~ 242 (396)
T 4eut_A 168 DDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKIITG 242 (396)
T ss_dssp CGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC--HHHHHHHHHS
T ss_pred CCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch--HHHHHHHhcC
Confidence 322 2233569999999999865 56788999999999999999999999754321110 1111222221
Q ss_pred CC---ccccc---------CCcc--ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 790 GD---IKSIV---------DPRL--QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 790 ~~---~~~ii---------d~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
.. +..+. ...+ ...........+.+++.+||+.||++||+++|+++.+++++..
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11 11000 0011 1123456677888999999999999999999999999998754
No 142
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.5e-37 Score=328.58 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=202.9
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
+.+.+.||+|+||.||+++.. ++.||||++.... ....+.+.+|+.++++++||||+++++++..++..++||||++
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (276)
T 2yex_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88 (276)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred eEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecC
Confidence 456789999999999999885 4889999987543 3445788999999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHV 724 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 724 (878)
+++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..+........
T Consensus 89 ~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 89 GGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp TEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 9999999975 45699999999999999999999998 999999999999999999999999999987643332223
Q ss_pred cccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 725 STVVAGTPGYLDPEYYTSNRL-TEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 725 ~~~~~gt~~Y~APE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
.....|+..|+|||.+.+..+ +.++||||||++++||++|+.||........ ....|.. ... ...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~----~~~---~~~------ 229 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKE----KKT---YLN------ 229 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHHT----TCT---TST------
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhhh----ccc---ccC------
Confidence 344568999999999987765 7799999999999999999999987554221 1222211 100 000
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
........+.+++.+||+.+|++||+++|+++
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 01122346778999999999999999999876
No 143
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.7e-36 Score=332.21 Aligned_cols=249 Identities=24% Similarity=0.384 Sum_probs=204.3
Q ss_pred HhhhcccccccccEEEEEEEEc--ceeEEEEEeccCChh------hHHHHHHHHHHHHHhcccceeeeeecccCCCccee
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQ------GFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTAL 638 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l 638 (878)
.+.+.+.||+|+||.||+++.. ++.||+|++...... ..+.+.+|++++.+++||||+++++++...+..++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4567789999999999999985 488999998754322 35789999999999999999999999999999999
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC----cEEEeecCCcc
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL----QAKLADFGLSK 714 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~----~~kL~DFGla~ 714 (878)
||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 93 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 93 ILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 9999999999999975 55789999999999999999999998 999999999999999888 79999999998
Q ss_pred ccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccc
Q 002809 715 SFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKS 794 (878)
Q Consensus 715 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ 794 (878)
...... ......||+.|+|||.+.+..++.++||||||++++||++|+.||......+.. .. +.....
T Consensus 168 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~-i~~~~~-- 235 (321)
T 2a2a_A 168 EIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------AN-ITSVSY-- 235 (321)
T ss_dssp ECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------HH-HHTTCC--
T ss_pred ecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHH------HH-HHhccc--
Confidence 764322 123356899999999999999999999999999999999999999876543321 11 111110
Q ss_pred ccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 795 IVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 795 iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
..++... ......+.+++.+||+.+|++||+++|+++.
T Consensus 236 ~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 236 DFDEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCCHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ccChhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0111111 1123467899999999999999999999873
No 144
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=331.74 Aligned_cols=261 Identities=22% Similarity=0.320 Sum_probs=198.3
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+++.. ++.||+|++.... ....+.+.+|++++.+++||||+++++++...+..++||||++
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (311)
T 4agu_A 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD 85 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCC
Confidence 45689999999999999986 4889999986543 2345678899999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHV 724 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 724 (878)
+++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 86 ~~~l~~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 158 (311)
T 4agu_A 86 HTVLHELDRY--QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS--DY 158 (311)
T ss_dssp EEHHHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred CchHHHHHhh--hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc--cc
Confidence 9999998865 45699999999999999999999998 99999999999999999999999999998764322 12
Q ss_pred cccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHH--------HHHHhcCCc-c-
Q 002809 725 STVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWV--------NSLIAKGDI-K- 793 (878)
Q Consensus 725 ~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v--------~~~~~~~~~-~- 793 (878)
.....|+..|+|||++.+ ..++.++||||||++++||++|++||......+........ ......... .
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 234568999999999876 67899999999999999999999999887654433221110 000000000 0
Q ss_pred -cccCCccccc---cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 794 -SIVDPRLQED---FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 794 -~iid~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
..-++.-... ........+.+++.+||+.+|++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0001000000 001233467899999999999999999999864
No 145
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.4e-36 Score=324.56 Aligned_cols=247 Identities=25% Similarity=0.409 Sum_probs=202.2
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+|+.. ++.||+|++... .....+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 88 (284)
T 3kk8_A 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT 88 (284)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred hhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCC
Confidence 45689999999999999875 478999998754 34456788999999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc---EEEeecCCccccccCCC
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ---AKLADFGLSKSFATDAN 721 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~---~kL~DFGla~~~~~~~~ 721 (878)
+++|.+++.. +..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.......
T Consensus 89 ~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~- 162 (284)
T 3kk8_A 89 GGELFEDIVA--REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE- 162 (284)
T ss_dssp SCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC-
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc-
Confidence 9999998875 46699999999999999999999998 9999999999999987655 9999999997654322
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
......|++.|+|||.+.+..++.++||||||++++||++|+.||.......... .+..+.... ..+
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-------~~~~~~~~~-~~~--- 229 (284)
T 3kk8_A 163 --AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA-------QIKAGAYDY-PSP--- 229 (284)
T ss_dssp --BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-------HHHHTCCCC-CTT---
T ss_pred --cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH-------HHHhccccC-Cch---
Confidence 2233568999999999999999999999999999999999999998765433211 111121110 000
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
........+.+++.+||+.+|++||+++|+++.
T Consensus 230 --~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 --EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp --TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred --hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 011223467899999999999999999999884
No 146
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-39 Score=350.87 Aligned_cols=262 Identities=24% Similarity=0.444 Sum_probs=187.8
Q ss_pred hhhcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHH--hcccceeeeeecccCCC----cceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMR--VHHRNLTSLVGHCDEDN----QTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~--l~H~nIv~l~g~~~~~~----~~~lV~E 641 (878)
+.+.+.||+|+||.||+|+..++.||||++.... ...+.+|.+++.. ++||||+++++++.... ..++|||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 81 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CTTSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred eeehhhccCCCCeEEEEEEEcCcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence 4567899999999999999999999999987543 3567788888887 78999999999997766 7899999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCccEEEcCCCcEEEeecCCc
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLH--------NGCKPPIVHRDVKSTNILLNEKLQAKLADFGLS 713 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla 713 (878)
|+++|+|.++++. ..+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+|||++
T Consensus 82 ~~~~g~L~~~l~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 82 YHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp CCTTCCHHHHHHH---CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred ccCCCCHHHHHhc---cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 9999999999964 45888899999999999999999 66 9999999999999999999999999999
Q ss_pred cccccCCCCc--ccccccCCCCccCccccccC------CCCCccchhhHHHHHHHHHhC----------CCCCCCCChHH
Q 002809 714 KSFATDANTH--VSTVVAGTPGYLDPEYYTSN------RLTEKSDVYSFGVVILEIITC----------KPAISRINEEE 775 (878)
Q Consensus 714 ~~~~~~~~~~--~~~~~~gt~~Y~APE~~~~~------~~t~ksDV~S~Gvvl~elltG----------~~p~~~~~~~~ 775 (878)
+......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7664332211 12234699999999999876 344689999999999999999 56665432211
Q ss_pred HHHHHHHHHHHHhcCCcccccCCcccccc-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 776 KIHIRQWVNSLIAKGDIKSIVDPRLQEDF-DANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 776 ~~~l~~~v~~~~~~~~~~~iid~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
. ...+ ....+... ...+.+...+ ...+...+.+++.+||+.+|++|||++||++.|+++.+.+
T Consensus 236 ~-~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 P-SVEE-MRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CCC--CHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred c-cHHH-HHHHHHHh----hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 0 0000 00111111 1112222111 2366778999999999999999999999999999876544
No 147
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=337.55 Aligned_cols=257 Identities=21% Similarity=0.306 Sum_probs=201.3
Q ss_pred hhhcccccccccEEEEEEEE--cceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeeccc----CCCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCD----EDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~----~~~~~~lV~E 641 (878)
+.+.+.||+|+||.||+++. .++.||||++........+.+.+|++++++++||||+++++++. .....++|||
T Consensus 31 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 110 (317)
T 2buj_A 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110 (317)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEE
Confidence 34568999999999999996 34889999998777777788999999999999999999999986 3457889999
Q ss_pred eccCCChhhhhccc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 642 FMANGNLQEYLSDI--SKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 642 y~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
|+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp CCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred eCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 99999999999753 246799999999999999999999998 9999999999999999999999999998765321
Q ss_pred CCCc-------ccccccCCCCccCccccccCC---CCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhc
Q 002809 720 ANTH-------VSTVVAGTPGYLDPEYYTSNR---LTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAK 789 (878)
Q Consensus 720 ~~~~-------~~~~~~gt~~Y~APE~~~~~~---~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~ 789 (878)
.... ......|++.|+|||.+.+.. ++.++||||||+++|||++|+.||........ .+.. ....
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~----~~~~ 262 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVAL----AVQN 262 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHH----HHHC
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhH----Hhhc
Confidence 1110 012345799999999987554 68999999999999999999999854211110 1111 1111
Q ss_pred CCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002809 790 GDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECL 841 (878)
Q Consensus 790 ~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~ 841 (878)
.. ...........+.+++.+||+.+|++||+++++++.|+.+.
T Consensus 263 -~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 263 -QL--------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp -C----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred -cC--------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 00 00111122346889999999999999999999999998753
No 148
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.8e-37 Score=352.96 Aligned_cols=248 Identities=23% Similarity=0.311 Sum_probs=199.3
Q ss_pred hhcccccccccEEEEEEEEcc--eeEEEEEeccCCh---hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 569 NFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSSA---QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~~---~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.||+|+||.||+++... +.||+|++.+... ...+.+.+|+.++..++||||+++++++.+++..++||||+
T Consensus 72 ~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~ 151 (410)
T 3v8s_A 72 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYM 151 (410)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 345799999999999999864 7899999875321 22345889999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++|+|.++++. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 152 ~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~-~~ 224 (410)
T 3v8s_A 152 PGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MV 224 (410)
T ss_dssp TTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-EE
T ss_pred CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCC-cc
Confidence 99999999874 3589999999999999999999998 99999999999999999999999999998764322 12
Q ss_pred ccccccCCCCccCccccccCC----CCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNR----LTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~----~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
.....+||+.|+|||++.+.. ++.++|||||||++|||++|++||...+..+... ....... .-.. +.
T Consensus 225 ~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~--~i~~~~~-~~~~-----p~ 296 (410)
T 3v8s_A 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS--KIMNHKN-SLTF-----PD 296 (410)
T ss_dssp ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHTHHH-HCCC-----CT
T ss_pred cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHH--HHHhccc-cccC-----CC
Confidence 233567999999999998665 7899999999999999999999998766533211 1111000 0000 00
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQ--RPTMSQVVME 836 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPsm~evl~~ 836 (878)
......++.+++.+||+.+|.+ ||+++||+++
T Consensus 297 -----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 297 -----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0112246789999999999988 9999999875
No 149
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=8e-37 Score=340.11 Aligned_cols=261 Identities=18% Similarity=0.242 Sum_probs=196.0
Q ss_pred hhhcccccccccEEEEEEEEc-----ceeEEEEEeccCChh-----------hHHHHHHHHHHHHHhcccceeeeeeccc
Q 002809 568 NNFERTLGKGGFGTVYYGRLN-----EIDVAVKMLSSSSAQ-----------GFQQFQAEVKLLMRVHHRNLTSLVGHCD 631 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~-----~~~vAvK~l~~~~~~-----------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~ 631 (878)
+.+.+.||+|+||.||+|+.. +..+|||+....... ....+.+|+..+..++||||+++++++.
T Consensus 39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~ 118 (345)
T 2v62_A 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL 118 (345)
T ss_dssp EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEE
T ss_pred EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccc
Confidence 456789999999999999984 478999998765322 1234678889999999999999999987
Q ss_pred C----CCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC--cE
Q 002809 632 E----DNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL--QA 705 (878)
Q Consensus 632 ~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~--~~ 705 (878)
. ....++||||+ +++|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++ .+
T Consensus 119 ~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 119 TEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSE
T ss_pred cccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcE
Confidence 7 77899999999 9999999986 33799999999999999999999998 999999999999999887 99
Q ss_pred EEeecCCccccccCCCC-----cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 002809 706 KLADFGLSKSFATDANT-----HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIR 780 (878)
Q Consensus 706 kL~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 780 (878)
||+|||+++.+...... .......||..|+|||++.+..++.++|||||||++|||++|+.||........ .+.
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~ 271 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV-AVQ 271 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH-HHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH-HHH
Confidence 99999999876432211 112345799999999999999999999999999999999999999965322111 111
Q ss_pred HHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002809 781 QWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSEC 840 (878)
Q Consensus 781 ~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~ 840 (878)
...... .. .+...+..... ......++.+++.+||+.+|++||++++|++.|+++
T Consensus 272 ~~~~~~-~~-~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 272 TAKTNL-LD-ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHH-HH-TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHhh-cc-cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 111111 11 11111000000 012234788999999999999999999999999873
No 150
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6.2e-37 Score=353.19 Aligned_cols=245 Identities=26% Similarity=0.363 Sum_probs=192.7
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC---ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS---SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+++.. ++.||||++... .......+.+|+.++.+++||||+++++++...+..++||||
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 229 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 229 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECC
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEee
Confidence 345689999999999999875 478999999753 333456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHN-GCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
+++|+|.+++.. ...+++..+..++.|+++||+|||+ . +|+||||||+|||++.++.+||+|||+++......
T Consensus 230 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 303 (446)
T 4ejn_A 230 ANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG- 303 (446)
T ss_dssp CSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC-
Confidence 999999999976 4579999999999999999999997 7 99999999999999999999999999997643221
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... . +..+.. .+
T Consensus 304 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~------~-i~~~~~------~~- 368 (446)
T 4ejn_A 304 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE------L-ILMEEI------RF- 368 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------H-HHHCCC------CC-
T ss_pred -cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH------H-HHhCCC------CC-
Confidence 22334679999999999999999999999999999999999999998765533211 1 111111 11
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRP-----TMSQVVME 836 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----sm~evl~~ 836 (878)
+.....++.+++.+||+.||++|| +++|+++.
T Consensus 369 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 369 ---PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 112234678999999999999999 99999873
No 151
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2e-36 Score=325.97 Aligned_cols=242 Identities=29% Similarity=0.427 Sum_probs=198.3
Q ss_pred hhcccccccccEEEEEEEEcc--eeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 569 NFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.||+|+||.||+++... ..||+|++.... ......+.+|++++++++||||+++++++...+..++||||+
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (279)
T 3fdn_A 12 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYA 91 (279)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecC
Confidence 456899999999999998865 679999986532 123467899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 92 ~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~---- 162 (279)
T 3fdn_A 92 PLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---- 162 (279)
T ss_dssp TTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc----
Confidence 99999999976 45699999999999999999999988 9999999999999999999999999988654322
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
......|+..|+|||.+.+..++.++||||||++++||++|+.||......+... .+..... .
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------~~~~~~~------~---- 225 (279)
T 3fdn_A 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK-------RISRVEF------T---- 225 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-------HHHHTCC------C----
T ss_pred cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHH-------HHHhCCC------C----
Confidence 1233568999999999999999999999999999999999999998766543211 1111110 1
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+......+.+++.+||+.+|++||+++|+++.
T Consensus 226 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111123467799999999999999999999985
No 152
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-36 Score=330.63 Aligned_cols=256 Identities=21% Similarity=0.271 Sum_probs=197.6
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+++.. ++.||+|++.... ....+.+.+|+.++.+++||||+++++++..++..++||||
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRL 115 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEe
Confidence 345689999999999999875 4889999987542 33457899999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++++|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 116 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 189 (309)
T 2h34_A 116 INGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL- 189 (309)
T ss_dssp CCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc-
Confidence 999999999976 45699999999999999999999998 999999999999999999999999999876543221
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||....... ....+.... .. ..
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~~~-~~------~~ 255 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV-------MGAHINQAI-PR------PS 255 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH-------HHHHHHSCC-CC------GG
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH-------HHHHhccCC-CC------cc
Confidence 12233568999999999999999999999999999999999999998654321 111111111 00 00
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRP-TMSQVVMELSECLAA 843 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-sm~evl~~L~~~~~~ 843 (878)
.........+.+++.+||+.+|++|| +++++++.|++++..
T Consensus 256 ~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 256 TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 11112233677899999999999999 999999999986543
No 153
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.2e-36 Score=335.90 Aligned_cols=243 Identities=28% Similarity=0.432 Sum_probs=198.0
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+...+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++.+++||||+++++++..++..++||||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 445678999999999999863 5889999997542 33456799999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+. |+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 136 CL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp CS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 97 6888887542 45799999999999999999999998 9999999999999999999999999999765322
Q ss_pred cccccccCCCCccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCc
Q 002809 723 HVSTVVAGTPGYLDPEYYT---SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
....||+.|+|||++. ...++.++|||||||+++||++|++||......... ..... +.......
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~------~~~~~-~~~~~~~~-- 275 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQ-NESPALQS-- 275 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHH-SCCCCCCC--
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHh-cCCCCCCC--
Confidence 2346899999999984 567899999999999999999999999876543321 11111 11111111
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
......+.+++.+||+.+|++||+++++++.
T Consensus 276 ------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 276 ------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ------CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1122467789999999999999999999864
No 154
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.1e-37 Score=344.11 Aligned_cols=249 Identities=23% Similarity=0.320 Sum_probs=190.5
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+++.. ++.||||++..... ..+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 100 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASG 100 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCC
Confidence 456789999999999999985 48899999976432 236788999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc--EEEeecCCccccccCCCCc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ--AKLADFGLSKSFATDANTH 723 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~--~kL~DFGla~~~~~~~~~~ 723 (878)
|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++......
T Consensus 101 ~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~--- 172 (361)
T 3uc3_A 101 GELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--- 172 (361)
T ss_dssp CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccC---
Confidence 999999975 45699999999999999999999998 9999999999999988765 9999999987432221
Q ss_pred ccccccCCCCccCccccccCCCCCc-cchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEK-SDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~k-sDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
......||+.|+|||++.+..++.+ +|||||||++|||++|+.||........ .......... .... +.
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~~~~~~~~-~~~~------~~- 242 (361)
T 3uc3_A 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD--YRKTIQRILS-VKYS------IP- 242 (361)
T ss_dssp --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC--HHHHHHHHHT-TCCC------CC-
T ss_pred CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH--HHHHHHHHhc-CCCC------CC-
Confidence 2233569999999999988887665 8999999999999999999986543211 1111222111 1100 00
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
........+.+++.+||+.+|++|||++|+++.
T Consensus 243 -~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 -DDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 011123467899999999999999999999874
No 155
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.6e-36 Score=332.53 Aligned_cols=254 Identities=23% Similarity=0.350 Sum_probs=194.9
Q ss_pred cccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEeeeccCCC
Q 002809 571 ERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 571 ~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
++.||+|+||.||+++.. ++.||||++........+.+.+|++++.++ +||||+++++++..++..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 367999999999999864 488999999877666678899999999995 79999999999999999999999999999
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc---EEEeecCCccccccCCC---
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ---AKLADFGLSKSFATDAN--- 721 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~---~kL~DFGla~~~~~~~~--- 721 (878)
|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++.......
T Consensus 98 L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (316)
T 2ac3_A 98 ILSHIHK--RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172 (316)
T ss_dssp HHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----------
T ss_pred HHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccc
Confidence 9999976 45699999999999999999999998 9999999999999998776 99999999876532211
Q ss_pred --CcccccccCCCCccCcccccc-----CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHH--------HHHHHHHHHH
Q 002809 722 --THVSTVVAGTPGYLDPEYYTS-----NRLTEKSDVYSFGVVILEIITCKPAISRINEEEK--------IHIRQWVNSL 786 (878)
Q Consensus 722 --~~~~~~~~gt~~Y~APE~~~~-----~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~--------~~l~~~v~~~ 786 (878)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. .....-....
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (316)
T 2ac3_A 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252 (316)
T ss_dssp ---------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHH
T ss_pred ccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHH
Confidence 111223459999999999875 5688999999999999999999999976542110 0000011112
Q ss_pred HhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 787 IAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 787 ~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
+..+... +...........+.+++.+||+.||++||+++|+++
T Consensus 253 i~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 253 IQEGKYE------FPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHCCCC------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhccCcc------cCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 2222110 000000112346889999999999999999999987
No 156
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=347.03 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=198.4
Q ss_pred hcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 570 FERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
+.+.||+|+||.||+++.. ++.||+|++.+.. ....+.+.+|..++.+++||||+++++++.+.+..++||||++
T Consensus 65 ~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 65 ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 4578999999999999985 4889999997532 2234568899999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHV 724 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 724 (878)
+|+|.+++... +..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 145 gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~-~~~ 219 (412)
T 2vd5_A 145 GGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG-TVR 219 (412)
T ss_dssp SCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-CEE
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCC-ccc
Confidence 99999999753 34799999999999999999999998 99999999999999999999999999998764332 222
Q ss_pred cccccCCCCccCccccc-------cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHHHHHhcCCccccc
Q 002809 725 STVVAGTPGYLDPEYYT-------SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIH-IRQWVNSLIAKGDIKSIV 796 (878)
Q Consensus 725 ~~~~~gt~~Y~APE~~~-------~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~v~~~~~~~~~~~ii 796 (878)
....+||+.|+|||++. ...++.++|||||||++|||++|++||...+..+... +..+. ..-..
T Consensus 220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~----~~~~~---- 291 (412)
T 2vd5_A 220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK----EHLSL---- 291 (412)
T ss_dssp CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH----HHCCC----
T ss_pred cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcc----cCcCC----
Confidence 33467999999999987 4578999999999999999999999998766543211 11110 00000
Q ss_pred CCccccccCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 002809 797 DPRLQEDFDANSVWKAVELAMACLSPTGNQR---PTMSQVVME 836 (878)
Q Consensus 797 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Psm~evl~~ 836 (878)
+... .....++.+++.+||+ +|++| |+++|++++
T Consensus 292 -p~~~----~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 -PLVD----EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp -C--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred -Cccc----cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 1111 1123467899999999 99998 688888764
No 157
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.1e-36 Score=327.83 Aligned_cols=249 Identities=24% Similarity=0.389 Sum_probs=201.8
Q ss_pred HHhhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
..+.+.+.||+|+||.||+++.. ++.||+|++........+.+.+|++++.+++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 34566789999999999999975 5889999998765555577899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE---cCCCcEEEeecCCccccccCC
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL---NEKLQAKLADFGLSKSFATDA 720 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~ 720 (878)
++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 89 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 89 SGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 99999999875 45689999999999999999999998 99999999999999 78899999999998754321
Q ss_pred CCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 721 NTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 721 ~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
......|++.|+|||.+.+..++.++||||||++++||++|+.||......... ..+.++... ...
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------~~i~~~~~~--~~~-- 228 (304)
T 2jam_A 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF-------EKIKEGYYE--FES-- 228 (304)
T ss_dssp ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-------HHHHHCCCC--CCT--
T ss_pred ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH-------HHHHcCCCC--CCc--
Confidence 223346899999999999999999999999999999999999999876543211 112222211 011
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.........+.+++.+||+.+|++||+++|+++.
T Consensus 229 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 --PFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp --TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred --cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111223468899999999999999999999873
No 158
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.2e-37 Score=331.97 Aligned_cols=257 Identities=23% Similarity=0.371 Sum_probs=196.9
Q ss_pred hhhcccccccccEEEEEEEEcc-----eeEEEEEeccC---ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-----IDVAVKMLSSS---SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-----~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV 639 (878)
+.+.+.||+|+||.||+|++.. ..||||++... .....+.+.+|++++.+++||||+++++++.... .++|
T Consensus 20 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v 98 (291)
T 1u46_A 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMV 98 (291)
T ss_dssp EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEE
T ss_pred eeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceee
Confidence 3556899999999999998632 35899998754 3345678999999999999999999999998765 8899
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
+||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 99 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 99 TELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred EecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 9999999999999753 35689999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCCc-ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccC
Q 002809 720 ANTH-VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVD 797 (878)
Q Consensus 720 ~~~~-~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid 797 (878)
.... ......++..|+|||.+.+..++.++||||||++++||++ |+.||......+. .......+...
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------~~~~~~~~~~~---- 244 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI------LHKIDKEGERL---- 244 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH------HHHHHTSCCCC----
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH------HHHHHccCCCC----
Confidence 2211 2233457788999999998889999999999999999999 9999987665331 11111111110
Q ss_pred CccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 002809 798 PRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAE 844 (878)
Q Consensus 798 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e 844 (878)
..+......+.+++.+||+.+|++||+++++++.|+++....
T Consensus 245 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 245 -----PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred -----CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 111223357889999999999999999999999999876543
No 159
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.2e-36 Score=324.87 Aligned_cols=242 Identities=24% Similarity=0.372 Sum_probs=179.0
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.||+|+||.||+++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 16 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 95 (275)
T 2eue_A 16 QIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 95 (275)
T ss_dssp CCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred EEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc
Confidence 45688999999999999864 4889999987542 233567899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
+++|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||+++++.+||+|||++.......
T Consensus 96 -~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 166 (275)
T 2eue_A 96 -GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--- 166 (275)
T ss_dssp -CEEHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred -CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc---
Confidence 7788888865 45699999999999999999999998 99999999999999999999999999997654322
Q ss_pred ccccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRL-TEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
......||+.|+|||.+.+..+ +.++||||||++++||++|+.||......... ..+..+.. .
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------~~~~~~~~------~--- 230 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF-------KNISNGVY------T--- 230 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHTCC------C---
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhCCC------C---
Confidence 1233468999999999987765 78999999999999999999999876543311 11111211 0
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+......+.+++.+||+.+|++|||++|+++.
T Consensus 231 -~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 -LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 111123467799999999999999999999863
No 160
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.1e-37 Score=345.62 Aligned_cols=259 Identities=26% Similarity=0.407 Sum_probs=189.6
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhc-ccceeeeeecccCCC--cceeEe
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVH-HRNLTSLVGHCDEDN--QTALIY 640 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~--~~~lV~ 640 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|+.++.++. ||||+++++++...+ ..++||
T Consensus 11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~ 90 (388)
T 3oz6_A 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVF 90 (388)
T ss_dssp EEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEE
T ss_pred eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEe
Confidence 455689999999999999875 488999998653 3455678889999999997 999999999986543 689999
Q ss_pred eeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCC
Q 002809 641 EFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDA 720 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~ 720 (878)
||++ |+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 91 e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 91 DYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp ECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred cccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 9997 689998874 4689999999999999999999998 99999999999999999999999999998653211
Q ss_pred -------------------CCcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 002809 721 -------------------NTHVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIR 780 (878)
Q Consensus 721 -------------------~~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 780 (878)
.........||+.|+|||++.+ ..++.++|||||||+++||++|++||...+..+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~- 242 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER- 242 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-
Confidence 1112234579999999999976 6789999999999999999999999987765433221
Q ss_pred HHHHHHHhcCCcc---ccc------------------CCcccccc------------CHHHHHHHHHHHHHccCCCCCCC
Q 002809 781 QWVNSLIAKGDIK---SIV------------------DPRLQEDF------------DANSVWKAVELAMACLSPTGNQR 827 (878)
Q Consensus 781 ~~v~~~~~~~~~~---~ii------------------d~~l~~~~------------~~~~~~~l~~l~~~Cl~~dP~~R 827 (878)
.. ..+...... .+- .......+ ......++.+++.+||+.||++|
T Consensus 243 -i~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 243 -II-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp -HH-HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred -HH-HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 11 111000000 000 00000000 00223468899999999999999
Q ss_pred CCHHHHHHH
Q 002809 828 PTMSQVVME 836 (878)
Q Consensus 828 Psm~evl~~ 836 (878)
||++|+++.
T Consensus 321 ~t~~e~l~H 329 (388)
T 3oz6_A 321 ISANDALKH 329 (388)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhCC
Confidence 999999865
No 161
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2e-36 Score=336.64 Aligned_cols=249 Identities=22% Similarity=0.369 Sum_probs=198.9
Q ss_pred HhhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEeeec
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.+.||+|+||.||+++.. ++.||||++..... .+.+|++++.++ +||||+++++++.+++..++||||+
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~ 98 (342)
T 2qr7_A 23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM 98 (342)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCC
Confidence 3456789999999999999986 48899999976542 345788899888 7999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC----CcEEEeecCCccccccC
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK----LQAKLADFGLSKSFATD 719 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~----~~~kL~DFGla~~~~~~ 719 (878)
++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||+.++ +.+||+|||+++.....
T Consensus 99 ~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (342)
T 2qr7_A 99 KGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173 (342)
T ss_dssp CSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC
Confidence 99999999975 45699999999999999999999998 99999999999998543 35999999999876433
Q ss_pred CCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCc
Q 002809 720 ANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPR 799 (878)
Q Consensus 720 ~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~ 799 (878)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..........+. ..+..+...
T Consensus 174 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~----~~i~~~~~~------ 241 (342)
T 2qr7_A 174 NG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL----ARIGSGKFS------ 241 (342)
T ss_dssp TC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHH----HHHHHCCCC------
T ss_pred CC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHH----HHHccCCcc------
Confidence 22 223457899999999999888999999999999999999999999864322211221 122222221
Q ss_pred cccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 800 LQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 800 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+...........+.+++.+||+.||++||+++|+++.
T Consensus 242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111112233467899999999999999999999874
No 162
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=6.1e-36 Score=323.64 Aligned_cols=248 Identities=27% Similarity=0.385 Sum_probs=196.7
Q ss_pred HhhhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.+.||+|+||.||+++.. +..||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 3566789999999999999875 4789999987643 334678999999999999999999999999999999999999
Q ss_pred cCCChhhhhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE---cCCCcEEEeecCCcccccc
Q 002809 644 ANGNLQEYLSDIS--KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL---NEKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 644 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~ 718 (878)
++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 9999999986532 46799999999999999999999998 99999999999999 4567899999999976543
Q ss_pred CCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCC
Q 002809 719 DANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDP 798 (878)
Q Consensus 719 ~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~ 798 (878)
.. ......|++.|+|||.+. ..++.++||||||++++||++|+.||......+.... ...........
T Consensus 180 ~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~------~~~~~~~~~~~-- 247 (285)
T 3is5_A 180 DE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK------ATYKEPNYAVE-- 247 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HHHCCCCCCC---
T ss_pred cc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhh------hccCCcccccc--
Confidence 22 223456899999999986 5688999999999999999999999987665432111 11111100000
Q ss_pred ccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 799 RLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 799 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
... ....+.+++.+||+.+|++||+++|+++
T Consensus 248 --~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 --CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred --cCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001 1246779999999999999999999985
No 163
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.7e-36 Score=325.58 Aligned_cols=244 Identities=25% Similarity=0.404 Sum_probs=203.0
Q ss_pred hhcccccccccEEEEEEEEcc--eeEEEEEeccC---ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 569 NFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSS---SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.||+|+||.||+++... +.||+|++... .....+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 97 (294)
T 2rku_A 18 VRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC 97 (294)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecC
Confidence 456899999999999999864 78999998754 3345678899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++++|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++....... .
T Consensus 98 ~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~ 170 (294)
T 2rku_A 98 RRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--E 170 (294)
T ss_dssp TTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT--C
T ss_pred CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc--c
Confidence 99999999875 45799999999999999999999998 99999999999999999999999999998764322 1
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
......|++.|+|||.+.+..++.++||||||++++||++|+.||......+... .+..+.. .+.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-------~~~~~~~------~~~-- 235 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-------RIKKNEY------SIP-- 235 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-------HHHTTCC------CCC--
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------HHhhccC------CCc--
Confidence 2234568999999999999899999999999999999999999998765433211 1111111 111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
......+.+++.+||+.+|++||+++|+++.
T Consensus 236 --~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 --KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1122467789999999999999999999874
No 164
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.1e-36 Score=327.73 Aligned_cols=243 Identities=27% Similarity=0.489 Sum_probs=195.9
Q ss_pred hhcccccccccEEEEEEEEcc--eeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccC----CCcceeEe
Q 002809 569 NFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDE----DNQTALIY 640 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~----~~~~~lV~ 640 (878)
.+.+.||+|+||.||+|.... ..||+|++... .....+.+.+|+.++++++||||+++++++.. +...++||
T Consensus 29 ~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 108 (290)
T 1t4h_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEE
Confidence 456789999999999998864 77999998754 34556789999999999999999999998754 45689999
Q ss_pred eeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCccEEEc-CCCcEEEeecCCccccc
Q 002809 641 EFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPP--IVHRDVKSTNILLN-EKLQAKLADFGLSKSFA 717 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDLKp~NILl~-~~~~~kL~DFGla~~~~ 717 (878)
||+++|+|.+++.. ...+++..++.++.|++.||+|||+. + |+||||||+|||++ .++.+||+|||++....
T Consensus 109 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 109 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999975 45689999999999999999999998 6 99999999999998 78999999999987543
Q ss_pred cCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccC
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVD 797 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid 797 (878)
.. ......|++.|+|||.+.+ .++.++||||||++++||++|+.||......... . ..+..+.....
T Consensus 184 ~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-----~-~~~~~~~~~~~-- 250 (290)
T 1t4h_A 184 AS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI-----Y-RRVTSGVKPAS-- 250 (290)
T ss_dssp TT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH-----H-HHHTTTCCCGG--
T ss_pred cc----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH-----H-HHHhccCCccc--
Confidence 22 2234568999999998874 5899999999999999999999999875443211 1 11111211111
Q ss_pred CccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 798 PRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 798 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.+......+.+++.+||+.+|++||+++|+++
T Consensus 251 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 251 ------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11112246889999999999999999999986
No 165
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.1e-36 Score=330.45 Aligned_cols=256 Identities=21% Similarity=0.331 Sum_probs=203.2
Q ss_pred HHHHHHhhhc-ccccccccEEEEEEEEc--ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhc-ccceeeeeecccCCCc
Q 002809 562 DVVKITNNFE-RTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVH-HRNLTSLVGHCDEDNQ 635 (878)
Q Consensus 562 dl~~~t~~f~-~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~ 635 (878)
+.....+.+. +.||+|+||.||+++.. ++.||+|++.... ......+.+|+.++.+++ ||||+++++++...+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3333344444 78999999999999886 4889999987543 334578999999999995 6999999999999999
Q ss_pred ceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC---CCcEEEeecCC
Q 002809 636 TALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE---KLQAKLADFGL 712 (878)
Q Consensus 636 ~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~---~~~~kL~DFGl 712 (878)
.++||||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 99999999999999999765567899999999999999999999998 9999999999999998 78999999999
Q ss_pred ccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCc
Q 002809 713 SKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDI 792 (878)
Q Consensus 713 a~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~ 792 (878)
++...... ......|++.|+|||++.+..++.++|||||||+++||++|+.||......+.... +.....
T Consensus 181 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-------i~~~~~ 250 (327)
T 3lm5_A 181 SRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN-------ISQVNV 250 (327)
T ss_dssp CEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-------HHHTCC
T ss_pred ccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH-------HHhccc
Confidence 98764322 12335699999999999999999999999999999999999999987665432111 111110
Q ss_pred ccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 793 KSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 793 ~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.............+.+++.+||+.+|++||+++|+++.
T Consensus 251 ------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 ------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 01111112233467899999999999999999999864
No 166
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1e-36 Score=342.96 Aligned_cols=246 Identities=26% Similarity=0.384 Sum_probs=191.9
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCC---hhhHHHHHHHHHH-HHHhcccceeeeeecccCCCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSS---AQGFQQFQAEVKL-LMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ei~~-L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
+.+.+.||+|+||.||+++... +.||+|++.+.. ......+.+|..+ ++.++||||+++++++...+..++|||
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E 119 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 119 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEe
Confidence 3567899999999999999864 779999997643 2234566777776 467899999999999999999999999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 120 ~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~- 193 (373)
T 2r5t_A 120 YINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN- 193 (373)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC-
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC-
Confidence 9999999999976 45689999999999999999999998 99999999999999999999999999998643221
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
......+||+.|+|||++.+..++.++|||||||++|||++|++||...+..+.. .... .+.. .+.
T Consensus 194 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~------~~i~-~~~~------~~~ 259 (373)
T 2r5t_A 194 -STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY------DNIL-NKPL------QLK 259 (373)
T ss_dssp -CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH------HHHH-HSCC------CCC
T ss_pred -CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH------HHHH-hccc------CCC
Confidence 2234567999999999999999999999999999999999999999876543311 1111 1111 111
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMEL 837 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L 837 (878)
. .....+.+++.+||+.+|++||++.+.++.+
T Consensus 260 ~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 260 P----NITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp S----SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred C----CCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1 1224678999999999999999986444433
No 167
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=324.72 Aligned_cols=244 Identities=27% Similarity=0.440 Sum_probs=179.4
Q ss_pred hhcccccccccEEEEEEEE--cceeEEEEEeccCCh---hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 569 NFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSSA---QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~~---~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.||+|+||.||+|+. .++.||||++..... ...+.+.+|++++.+++||||+++++++...+..++||||+
T Consensus 14 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 93 (278)
T 3cok_A 14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMC 93 (278)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecC
Confidence 4567899999999999987 358899999865421 23467899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++++|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 94 ~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-- 167 (278)
T 3cok_A 94 HNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE-- 167 (278)
T ss_dssp TTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred CCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC--
Confidence 999999999752 35689999999999999999999998 999999999999999999999999999986642221
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
......|++.|+|||.+.+..++.++||||||++++||++|+.||......... ..+..... .
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---------------~~~~~~~~--~ 230 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---------------NKVVLADY--E 230 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSSCC--C
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH---------------HHHhhccc--C
Confidence 122356899999999999989999999999999999999999999765432210 00010000 1
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.+.....++.+++.+||+.+|++||+++++++
T Consensus 231 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 231 MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 11222346789999999999999999999986
No 168
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.8e-36 Score=325.90 Aligned_cols=249 Identities=23% Similarity=0.387 Sum_probs=200.9
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecc--cCCCcceeEeee
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHC--DEDNQTALIYEF 642 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~--~~~~~~~lV~Ey 642 (878)
.+.+.||+|+||.||+++.. ++.||+|++... .....+.+.+|++++++++||||+++++++ ......++||||
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 88 (279)
T 2w5a_A 9 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88 (279)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEEC
T ss_pred eeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeC
Confidence 45689999999999999985 488999999754 344567899999999999999999999987 446788999999
Q ss_pred ccCCChhhhhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEecCCCCccEEEcCCCcEEEeecCCccc
Q 002809 643 MANGNLQEYLSDIS--KKVLSSQERLRIAVESAQGLEYLHNGCKPP-----IVHRDVKSTNILLNEKLQAKLADFGLSKS 715 (878)
Q Consensus 643 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-----ivHrDLKp~NILl~~~~~~kL~DFGla~~ 715 (878)
+++|+|.+++.... ...+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++.
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp CTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred CCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 99999999997533 34599999999999999999999998 6 99999999999999999999999999876
Q ss_pred cccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccc
Q 002809 716 FATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSI 795 (878)
Q Consensus 716 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~i 795 (878)
..... .......|+..|+|||.+.+..++.++||||||+++|||++|+.||......+. . ..+..+....
T Consensus 166 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~----~~i~~~~~~~- 235 (279)
T 2w5a_A 166 LNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL---A----GKIREGKFRR- 235 (279)
T ss_dssp C---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H----HHHHHTCCCC-
T ss_pred ecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH---H----HHHhhccccc-
Confidence 53321 122335689999999999998999999999999999999999999987654321 1 1222232211
Q ss_pred cCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002809 796 VDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELS 838 (878)
Q Consensus 796 id~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~ 838 (878)
+ +.....++.+++.+||+.+|++||+++||++.+.
T Consensus 236 ----~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 ----I----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp ----C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ----C----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 1 1122346889999999999999999999998654
No 169
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.6e-36 Score=331.87 Aligned_cols=244 Identities=25% Similarity=0.409 Sum_probs=203.1
Q ss_pred hhcccccccccEEEEEEEEcc--eeEEEEEeccC---ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 569 NFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSS---SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.||+|+||.||+++..+ +.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 44 ~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 123 (335)
T 2owb_A 44 VRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC 123 (335)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecC
Confidence 456899999999999999864 78999998754 3345678899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++++|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 124 ~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--~ 196 (335)
T 2owb_A 124 RRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--E 196 (335)
T ss_dssp TTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT--C
T ss_pred CCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc--c
Confidence 99999999875 45799999999999999999999998 99999999999999999999999999998764322 1
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQED 803 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~ 803 (878)
......|+..|+|||++.+..++.++||||||+++|||++|+.||......+... . +..+.. .+..
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~-~~~~~~------~~~~- 262 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL------R-IKKNEY------SIPK- 262 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------H-HHHTCC------CCCT-
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH------H-HhcCCC------CCCc-
Confidence 2234568999999999999999999999999999999999999998765433211 1 111111 1111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 804 FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 804 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.....+.+++.+||+.||++||+++|+++.
T Consensus 263 ---~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 263 ---HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 122367789999999999999999999874
No 170
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.4e-36 Score=343.25 Aligned_cols=245 Identities=22% Similarity=0.306 Sum_probs=188.0
Q ss_pred ccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHh-cccceeeeeecccC----CCcceeEeeecc
Q 002809 572 RTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDE----DNQTALIYEFMA 644 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~----~~~~~lV~Ey~~ 644 (878)
+.||+|+||.||+++.. ++.||||++... ..+.+|++++.++ +||||+++++++.. ....++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999886 478999999643 4577888887554 89999999998864 567899999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC---CCcEEEeecCCccccccCCC
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE---KLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~---~~~~kL~DFGla~~~~~~~~ 721 (878)
+|+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 143 gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~-- 217 (400)
T 1nxk_A 143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-- 217 (400)
T ss_dssp SEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC----
T ss_pred CCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCC--
Confidence 99999999875556799999999999999999999998 9999999999999998 789999999999865322
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+..+... +.
T Consensus 218 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---~~~~~i~~~~~~------~~ 287 (400)
T 1nxk_A 218 -NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP---GMKTRIRMGQYE------FP 287 (400)
T ss_dssp ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC---SHHHHHHHTCCC------CC
T ss_pred -CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH---HHHHHHHcCccc------CC
Confidence 12234578999999999999999999999999999999999999997654321000 001111112111 00
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.........++.+++.+||+.||++|||++|+++.
T Consensus 288 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 288 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00011233468899999999999999999999985
No 171
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=7e-36 Score=325.59 Aligned_cols=248 Identities=25% Similarity=0.344 Sum_probs=199.0
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCC----hhhHHHHHHHHHHHHHhcccceeeeeecc--cCCCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSS----AQGFQQFQAEVKLLMRVHHRNLTSLVGHC--DEDNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~----~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~--~~~~~~~lV 639 (878)
+.+.+.||+|+||.||+++... ..||+|++.... ....+.+.+|++++++++||||+++++++ .+....++|
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV 86 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEE
Confidence 3556899999999999999854 789999987542 23457899999999999999999999998 455688999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
|||++++ |.+++.......+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 87 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 87 MEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred ehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9999876 77877765667899999999999999999999998 9999999999999999999999999999876443
Q ss_pred CCCcccccccCCCCccCccccccCC--CCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccC
Q 002809 720 ANTHVSTVVAGTPGYLDPEYYTSNR--LTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVD 797 (878)
Q Consensus 720 ~~~~~~~~~~gt~~Y~APE~~~~~~--~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid 797 (878)
..........|+..|+|||++.+.. .+.++||||||++++||++|+.||......... ..+..+..
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------~~i~~~~~----- 230 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF-------ENIGKGSY----- 230 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-------HHHHHCCC-----
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH-------HHHhcCCC-----
Confidence 3333334556999999999997644 377999999999999999999999876543211 11222211
Q ss_pred CccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 798 PRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 798 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+. ......+.+++.+||+.+|++||+++|+++.
T Consensus 231 -~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 -AIP----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -CCC----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -CCC----CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 1223467799999999999999999999875
No 172
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=324.05 Aligned_cols=245 Identities=26% Similarity=0.442 Sum_probs=196.0
Q ss_pred ccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCCChh
Q 002809 572 RTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANGNLQ 649 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 649 (878)
..||+|+||.||+|+.. +..||||.+........+.+.+|+.++.+++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 48999999999999974 3789999998776666788999999999999999999999999999999999999999999
Q ss_pred hhhcccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC-CCcEEEeecCCccccccCCCCccccc
Q 002809 650 EYLSDIS-KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE-KLQAKLADFGLSKSFATDANTHVSTV 727 (878)
Q Consensus 650 ~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~~ 727 (878)
+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++...... .....
T Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 182 (295)
T 2clq_A 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--PCTET 182 (295)
T ss_dssp HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------CC
T ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC--Ccccc
Confidence 9997643 34577999999999999999999998 9999999999999988 8999999999998654321 12234
Q ss_pred ccCCCCccCccccccCC--CCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccC
Q 002809 728 VAGTPGYLDPEYYTSNR--LTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFD 805 (878)
Q Consensus 728 ~~gt~~Y~APE~~~~~~--~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~ 805 (878)
..|+..|+|||++.+.. ++.++||||||+++|||++|+.||.......... + ..... . ..+.+ +
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~-~~~~~-~-----~~~~~----~ 248 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM---F-KVGMF-K-----VHPEI----P 248 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH---H-HHHHH-C-----CCCCC----C
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH---H-hhccc-c-----ccccc----c
Confidence 56899999999997643 7899999999999999999999997644322111 0 00010 0 01111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 806 ANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 806 ~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
......+.+++.+||+.+|++||+++|+++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 222346789999999999999999999975
No 173
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.5e-36 Score=333.84 Aligned_cols=261 Identities=23% Similarity=0.348 Sum_probs=198.8
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+++.. ++.||||++.... ....+.+.+|++++.+++||||+++++++...+..++||||++
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 107 (331)
T 4aaa_A 28 ENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVD 107 (331)
T ss_dssp EEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCC
Confidence 45679999999999999986 4789999986543 3345678899999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHV 724 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 724 (878)
+++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 108 ~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 180 (331)
T 4aaa_A 108 HTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--EV 180 (331)
T ss_dssp EEHHHHHHHS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred cchHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc--cc
Confidence 9999988764 45699999999999999999999998 99999999999999999999999999997654322 12
Q ss_pred cccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHH-HHH-------HHHHHhcCC-ccc
Q 002809 725 STVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHI-RQW-------VNSLIAKGD-IKS 794 (878)
Q Consensus 725 ~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l-~~~-------v~~~~~~~~-~~~ 794 (878)
.....|+..|+|||++.+. .++.++|||||||++|||++|++||......+.... ... ......... ...
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 2335689999999999875 789999999999999999999999987765432211 100 000000100 011
Q ss_pred ccCCccccc-----cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 795 IVDPRLQED-----FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 795 iid~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
...+.+... ........+.+++.+||+.||++||+++|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 111111111 111234578899999999999999999999874
No 174
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.3e-36 Score=347.83 Aligned_cols=244 Identities=24% Similarity=0.375 Sum_probs=202.3
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCCh---hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA---QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+|+.. ++.||||++..... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~ 97 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 355689999999999999985 58899999975422 2346789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-- 170 (476)
T 2y94_A 98 VSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 170 (476)
T ss_dssp CSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc--
Confidence 999999999975 56799999999999999999999998 99999999999999999999999999998764322
Q ss_pred cccccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRL-TEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
.....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ . ..+..+...
T Consensus 171 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~------~-~~i~~~~~~-------- 234 (476)
T 2y94_A 171 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL------F-KKICDGIFY-------- 234 (476)
T ss_dssp -CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH------H-HHHHTTCCC--------
T ss_pred -cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH------H-HHHhcCCcC--------
Confidence 2234579999999999988765 6899999999999999999999987654321 1 112222110
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+......+.+++.+||+.||++|||++|+++.
T Consensus 235 --~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 --TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp --CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred --CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 011122367899999999999999999999873
No 175
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-35 Score=343.64 Aligned_cols=190 Identities=22% Similarity=0.361 Sum_probs=152.3
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeeccc-----CCCccee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCD-----EDNQTAL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~-----~~~~~~l 638 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|+++|.+++||||+++++++. .....++
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 134 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134 (458)
T ss_dssp EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEE
Confidence 456789999999999999865 488999998753 3445678999999999999999999999984 3357899
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccccc
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~ 718 (878)
||||+ +|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 135 v~e~~-~~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 135 VLEIA-DSDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EECCC-SEEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEecc-ccchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99998 5799999875 56799999999999999999999998 999999999999999999999999999987642
Q ss_pred CCCC-------------------------cccccccCCCCccCcccc-ccCCCCCccchhhHHHHHHHHHh
Q 002809 719 DANT-------------------------HVSTVVAGTPGYLDPEYY-TSNRLTEKSDVYSFGVVILEIIT 763 (878)
Q Consensus 719 ~~~~-------------------------~~~~~~~gt~~Y~APE~~-~~~~~t~ksDV~S~Gvvl~ellt 763 (878)
.... ......+||+.|+|||++ ....++.++|||||||++|||++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 2111 122345689999999986 56679999999999999999999
No 176
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=335.82 Aligned_cols=239 Identities=22% Similarity=0.361 Sum_probs=198.2
Q ss_pred HhhhcccccccccEEEEEEEEc--ceeEEEEEeccCCh--------hhHHHHHHHHHHHHHhcccceeeeeecccCCCcc
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA--------QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQT 636 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~--------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~ 636 (878)
.+.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++.+++||||+++++++...+..
T Consensus 25 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~ 104 (335)
T 3dls_A 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFF 104 (335)
T ss_dssp HEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred ceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEE
Confidence 3455689999999999999864 48899999976531 1334678899999999999999999999999999
Q ss_pred eeEeeeccCC-ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccc
Q 002809 637 ALIYEFMANG-NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKS 715 (878)
Q Consensus 637 ~lV~Ey~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~ 715 (878)
++||||+.+| +|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~lv~e~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 105 QLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEEECCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 9999999777 99999976 45699999999999999999999998 999999999999999999999999999987
Q ss_pred cccCCCCcccccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccc
Q 002809 716 FATDANTHVSTVVAGTPGYLDPEYYTSNRL-TEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKS 794 (878)
Q Consensus 716 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ 794 (878)
..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 180 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------------- 236 (335)
T 3dls_A 180 LERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------------- 236 (335)
T ss_dssp CCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------------------
T ss_pred CCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------------------
Confidence 64332 2233569999999999988776 78999999999999999999999753211
Q ss_pred ccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 795 IVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 795 iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
...... .+......+.+++.+||+.+|++||+++|+++.
T Consensus 237 -~~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -VEAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -TTTCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -HhhccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 011123467899999999999999999999885
No 177
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=7.7e-36 Score=322.19 Aligned_cols=243 Identities=26% Similarity=0.368 Sum_probs=201.4
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+++... ..||+|++.... ....+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 95 (284)
T 2vgo_A 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF 95 (284)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEe
Confidence 3456899999999999999864 789999986532 22346789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--- 167 (284)
T 2vgo_A 96 APRGELYKELQK--HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--- 167 (284)
T ss_dssp CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS---
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc---
Confidence 999999999976 45689999999999999999999998 9999999999999999999999999998755322
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
......|+..|+|||.+.+..++.++||||||++++||++|+.||......+.. ..+.... ..+.
T Consensus 168 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------~~~~~~~------~~~~- 232 (284)
T 2vgo_A 168 -RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH-------RRIVNVD------LKFP- 232 (284)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-------HHHHTTC------CCCC-
T ss_pred -ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH-------HHHhccc------cCCC-
Confidence 123356899999999999999999999999999999999999999876543311 1111111 1111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
......+.+++.+||+.+|++||+++|+++.
T Consensus 233 ---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 233 ---PFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ---CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 1223467899999999999999999999874
No 178
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1e-35 Score=345.24 Aligned_cols=263 Identities=18% Similarity=0.279 Sum_probs=206.7
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcc-cceeeeeecccCCCcceeEeeecc
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHH-RNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H-~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
+.+.+.||+|+||.||+|+.. ++.||||++...... .++.+|++++..++| +++..+..++...+..++||||+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 345689999999999999975 588999988754332 468899999999987 45555666667788889999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE---cCCCcEEEeecCCccccccCCC
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL---NEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~~ 721 (878)
+++|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 86 g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 86 GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 99999999743 45699999999999999999999998 99999999999999 6889999999999987654322
Q ss_pred C-----cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccccc
Q 002809 722 T-----HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIV 796 (878)
Q Consensus 722 ~-----~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ii 796 (878)
. .......||..|+|||++.+..++.++|||||||++|||++|+.||..............+........+..+.
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALC 241 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHH
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHh
Confidence 1 11225679999999999999999999999999999999999999998765433222222222111111111111
Q ss_pred CCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 002809 797 DPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMA 846 (878)
Q Consensus 797 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~ 846 (878)
. ....++.+++..||+.+|++||++++|++.|++++..+..
T Consensus 242 -----~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~ 282 (483)
T 3sv0_A 242 -----R----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGF 282 (483)
T ss_dssp -----T----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred -----c----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCC
Confidence 1 1124788999999999999999999999999998876543
No 179
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.1e-35 Score=344.41 Aligned_cols=258 Identities=21% Similarity=0.278 Sum_probs=192.7
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCC------Ccce
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDED------NQTA 637 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~------~~~~ 637 (878)
+.+.+.||+|+||.||+++.. ++.||||++... .....+.+.+|+.++++++||||+++++++... ...+
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 143 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 143 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence 345688999999999999875 488999999754 444567889999999999999999999998654 3569
Q ss_pred eEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccc
Q 002809 638 LIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFA 717 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 717 (878)
+||||+++ +|.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 144 lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 144 LVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 99999976 46666542 489999999999999999999998 99999999999999999999999999998654
Q ss_pred cCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHH-HHH--------------
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHI-RQW-------------- 782 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l-~~~-------------- 782 (878)
.. .......||+.|+|||++.+..++.++|||||||+++||++|++||...+..+.... .+.
T Consensus 216 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 216 TS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp -C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred CC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence 32 123346799999999999999999999999999999999999999987665332211 100
Q ss_pred -HHHHHhcCC-cc-----cccCCccccc---cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 783 -VNSLIAKGD-IK-----SIVDPRLQED---FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 783 -v~~~~~~~~-~~-----~iid~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
......... .. ..+...+... .......++.+|+.+||+.||++|||++|+++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 00 0000000000 011124578899999999999999999999874
No 180
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-36 Score=338.77 Aligned_cols=251 Identities=24% Similarity=0.345 Sum_probs=199.2
Q ss_pred hhhcccccccccEEEEEEEE-----cceeEEEEEeccCC----hhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcce
Q 002809 568 NNFERTLGKGGFGTVYYGRL-----NEIDVAVKMLSSSS----AQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTA 637 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~-----~~~~vAvK~l~~~~----~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~ 637 (878)
+.+.+.||+|+||.||+++. .++.||||++.... ....+.+.+|++++.++ +||||+++++++..++..+
T Consensus 56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 135 (355)
T 1vzo_A 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH 135 (355)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEE
Confidence 45678999999999999987 45889999987532 23345678899999999 5999999999999999999
Q ss_pred eEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccc
Q 002809 638 LIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFA 717 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 717 (878)
+||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 136 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 99999999999999976 45699999999999999999999998 99999999999999999999999999998653
Q ss_pred cCCCCcccccccCCCCccCcccccc--CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccc
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTS--NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSI 795 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~--~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~i 795 (878)
... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ............
T Consensus 211 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~----- 282 (355)
T 1vzo_A 211 ADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE----- 282 (355)
T ss_dssp GGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCC-----
T ss_pred cCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhccC-----
Confidence 322 222334579999999999985 3578999999999999999999999975432211 111112211111
Q ss_pred cCCccccccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 002809 796 VDPRLQEDFDANSVWKAVELAMACLSPTGNQRP-----TMSQVVMEL 837 (878)
Q Consensus 796 id~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----sm~evl~~L 837 (878)
+. .+......+.+++.+||+.+|++|| +++|+++..
T Consensus 283 --~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 --PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp --CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred --CC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11 1122234677999999999999999 999998754
No 181
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.4e-36 Score=354.08 Aligned_cols=248 Identities=24% Similarity=0.341 Sum_probs=203.3
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
.+.+.||+|+||.||+++.. ++.||+|++.... ......+.+|+++|.+++||||+++++++...+..++||||+
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~ 266 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 266 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcC
Confidence 44679999999999999985 4889999997532 223467889999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++|+|.+++.......+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 267 ~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~--- 340 (576)
T 2acx_A 267 NGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--- 340 (576)
T ss_dssp CSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC---
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc---
Confidence 999999999875556699999999999999999999998 99999999999999999999999999998764322
Q ss_pred ccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 724 VSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEE-KIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~-~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
.....+||+.|+|||++.+..++.++|||||||++|||++|++||....... ...+.. .+..... .
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~----~i~~~~~------~--- 407 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER----LVKEVPE------E--- 407 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH----HHHHCCC------C---
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH----Hhhcccc------c---
Confidence 2233579999999999999999999999999999999999999998754311 111111 1111110 1
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRP-----TMSQVVME 836 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----sm~evl~~ 836 (878)
++.....++.+++.+||+.||++|| +++||+++
T Consensus 408 -~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 408 -YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 1112234678999999999999999 77888764
No 182
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.7e-36 Score=333.60 Aligned_cols=258 Identities=22% Similarity=0.287 Sum_probs=190.6
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCCh--hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeec
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA--QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFM 643 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 643 (878)
+.+.+.||+|+||.||+++.. ++.||||++..... ...+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 115 (329)
T 3gbz_A 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYA 115 (329)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecC
Confidence 445689999999999999865 48899999975432 23467889999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE-----cCCCcEEEeecCCcccccc
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL-----NEKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl-----~~~~~~kL~DFGla~~~~~ 718 (878)
+ |+|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||+ ++++.+||+|||+++....
T Consensus 116 ~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 116 E-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp S-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred C-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 7 599999976 45699999999999999999999998 99999999999999 4555699999999986642
Q ss_pred CCCCcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHh--cCCcccc
Q 002809 719 DANTHVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIA--KGDIKSI 795 (878)
Q Consensus 719 ~~~~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~--~~~~~~i 795 (878)
.. .......||..|+|||++.+. .++.++|||||||+++||++|++||......+.. .......-. .......
T Consensus 190 ~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 265 (329)
T 3gbz_A 190 PI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL--FKIFEVLGLPDDTTWPGV 265 (329)
T ss_dssp ------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCTTTSTTG
T ss_pred cc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHH--HHHHHHhCCCchhhhhhh
Confidence 21 122334689999999999874 4899999999999999999999999876654322 111111100 0000000
Q ss_pred -------------cCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 796 -------------VDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 796 -------------id~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
....+..........++.+++.+||+.||++|||++|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000001112357789999999999999999999975
No 183
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7.4e-36 Score=333.92 Aligned_cols=260 Identities=22% Similarity=0.330 Sum_probs=201.6
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
.+.+.||+|+||.||+++.. +..||+|++... .....+.+.+|++++.+++||||+++++++..++..++||||+++
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 115 (360)
T 3eqc_A 36 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 115 (360)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCC
Confidence 45678999999999999987 488999998865 344567899999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++.+||+|||++...... ..
T Consensus 116 ~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 187 (360)
T 3eqc_A 116 GSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MA 187 (360)
T ss_dssp CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----C-
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc----cc
Confidence 999999976 456999999999999999999999731 7999999999999999999999999998765322 12
Q ss_pred ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHH---------HHhcC------
Q 002809 726 TVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNS---------LIAKG------ 790 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~---------~~~~~------ 790 (878)
....||+.|+|||++.+..++.++|||||||+++||++|+.||......+.......... ....+
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence 235689999999999999999999999999999999999999987665432211100000 00000
Q ss_pred --------CcccccC----CccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 791 --------DIKSIVD----PRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 791 --------~~~~iid----~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
...+.++ ..............+.+++.+||+.+|++|||++|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000 000000011123468899999999999999999999985
No 184
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=335.39 Aligned_cols=258 Identities=22% Similarity=0.367 Sum_probs=194.0
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCChh-hHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQ-GFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~-~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
.+.+.||+|+||.||+|+.. ++.||||++...... ....+.+|++++++++||||+++++++..++..++||||++
T Consensus 5 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 83 (324)
T 3mtl_A 5 IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD- 83 (324)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-
T ss_pred EEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-
Confidence 45678999999999999986 478999998754322 22356689999999999999999999999999999999997
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
|+|.+++... +..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 84 ~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~ 157 (324)
T 3mtl_A 84 KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--KTY 157 (324)
T ss_dssp EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc--ccc
Confidence 5999988753 45699999999999999999999998 99999999999999999999999999987653221 222
Q ss_pred ccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcC---CcccccCC---
Q 002809 726 TVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKG---DIKSIVDP--- 798 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~---~~~~iid~--- 798 (878)
....||..|+|||++.+ ..++.++|||||||+++||++|+.||......+.... +....... ........
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHF---IFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhCCCChHhchhhhcchhh
Confidence 33468999999999876 5689999999999999999999999988765443221 22211111 11111100
Q ss_pred ------ccc----cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 799 ------RLQ----EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 799 ------~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
... ..........+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000 00011223467899999999999999999999873
No 185
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.7e-35 Score=322.65 Aligned_cols=245 Identities=27% Similarity=0.472 Sum_probs=203.5
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
...+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|+.++.+++||||+++++++..+...++||||+++
T Consensus 25 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 104 (303)
T 3a7i_A 25 TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 104 (303)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred HHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCC
Confidence 44678999999999999875 4889999987553 34567899999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
++|.+++.. ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....... ...
T Consensus 105 ~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~ 176 (303)
T 3a7i_A 105 GSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKR 176 (303)
T ss_dssp EEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--CCB
T ss_pred CcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc--ccc
Confidence 999999864 5699999999999999999999998 99999999999999999999999999998764322 122
Q ss_pred ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccC
Q 002809 726 TVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFD 805 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~ 805 (878)
....|+..|+|||.+.+..++.++||||||++++||++|+.||.......... .+..+.. +.+....
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------~~~~~~~-----~~~~~~~- 243 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-------LIPKNNP-----PTLEGNY- 243 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-------HHHHSCC-----CCCCSSC-
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH-------HhhcCCC-----CCCcccc-
Confidence 34568999999999999999999999999999999999999998765433211 1111111 1111122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002809 806 ANSVWKAVELAMACLSPTGNQRPTMSQVVMEL 837 (878)
Q Consensus 806 ~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L 837 (878)
...+.+++.+||+.+|++||++.|+++..
T Consensus 244 ---~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 244 ---SKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ---CHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ---CHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 23678999999999999999999998854
No 186
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-36 Score=334.43 Aligned_cols=253 Identities=24% Similarity=0.335 Sum_probs=192.8
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCC------cce
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN------QTA 637 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~------~~~ 637 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 106 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 106 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence 345678999999999999875 488999998653 3344678899999999999999999999987653 459
Q ss_pred eEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccc
Q 002809 638 LIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFA 717 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 717 (878)
+||||+ +++|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 107 lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 107 LVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp EEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 999999 8899999874 4689999999999999999999998 99999999999999999999999999998653
Q ss_pred cCCCCcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcC------
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKG------ 790 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~------ 790 (878)
.. .....+|..|+|||++.+ ..++.++||||+||+++||++|++||......+.... ... .....
T Consensus 180 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~--i~~-~~g~~~~~~~~ 251 (367)
T 1cm8_A 180 SE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE--IMK-VTGTPPAEFVQ 251 (367)
T ss_dssp SS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH--HHH-HHCCCCHHHHH
T ss_pred cc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHH-hcCCCCHHHHH
Confidence 22 223568999999999887 6799999999999999999999999987665332211 100 00000
Q ss_pred ------------CcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 791 ------------DIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 791 ------------~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+...-...+. .........+.+++.+||+.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000001111 1112234578899999999999999999999873
No 187
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.8e-36 Score=321.34 Aligned_cols=242 Identities=20% Similarity=0.309 Sum_probs=196.2
Q ss_pred HhhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEee
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
.+.+.+.||+|+||.||+|+.. ++.||+|++... .......+.+|+..+.++ +||||+++++++.+++..++|||
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e 91 (289)
T 1x8b_A 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 91 (289)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEE
Confidence 3455689999999999999985 588999998764 334567889999999999 89999999999999999999999
Q ss_pred eccCCChhhhhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC-----------------
Q 002809 642 FMANGNLQEYLSDIS--KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK----------------- 702 (878)
Q Consensus 642 y~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~----------------- 702 (878)
|+++|+|.+++.... ...+++..++.++.|+++||+|||++ +|+||||||+|||++.+
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~ 168 (289)
T 1x8b_A 92 YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 168 (289)
T ss_dssp CCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-------------------
T ss_pred ecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence 999999999997643 26699999999999999999999998 99999999999999844
Q ss_pred --CcEEEeecCCccccccCCCCcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 002809 703 --LQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHI 779 (878)
Q Consensus 703 --~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l 779 (878)
..+||+|||++....... ...|+..|+|||.+.+. .++.++|||||||+++||++|.+++......
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----- 237 (289)
T 1x8b_A 169 NKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW----- 237 (289)
T ss_dssp -CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH-----
T ss_pred CceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH-----
Confidence 479999999998764321 23589999999999866 5678999999999999999999876543211
Q ss_pred HHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 780 RQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 780 ~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
..+..+... .+. ......+.+++.+||+.+|++||+++|+++.
T Consensus 238 -----~~~~~~~~~-----~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 238 -----HEIRQGRLP-----RIP----QVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -----HHHHTTCCC-----CCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----HHHHcCCCC-----CCC----cccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111222221 111 1223467899999999999999999999863
No 188
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=333.64 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=198.5
Q ss_pred hhcccccccccEEEEEEEEcceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccCC
Q 002809 569 NFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMANG 646 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 646 (878)
.+.+.||+|+||.||+|+..+ .+|+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 36 EIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp ECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 456899999999999999866 59999987542 233467889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCC---CCc
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDA---NTH 723 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~---~~~ 723 (878)
+|.+++... +..+++..++.++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++...... ...
T Consensus 115 ~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~ 189 (319)
T 2y4i_B 115 TLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRED 189 (319)
T ss_dssp EHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----------CC
T ss_pred cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccccccc
Confidence 999999752 34689999999999999999999998 999999999999998 6799999999987653211 112
Q ss_pred ccccccCCCCccCcccccc---------CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccc
Q 002809 724 VSTVVAGTPGYLDPEYYTS---------NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKS 794 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~~---------~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ 794 (878)
......|+..|+|||.+.. ..++.++||||||+++|||++|+.||......... ..+..+....
T Consensus 190 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~~~~ 262 (319)
T 2y4i_B 190 KLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII-------WQMGTGMKPN 262 (319)
T ss_dssp SCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH-------HHHHTTCCCC
T ss_pred ccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHhccCCCCC
Confidence 2233458899999999874 45788999999999999999999999876654321 1112222111
Q ss_pred ccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHhhcCC
Q 002809 795 IVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEMARANS 850 (878)
Q Consensus 795 iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~~~~~~ 850 (878)
..... ....+.+++.+||+.+|++||+++++++.|+++..........
T Consensus 263 ~~~~~--------~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~ 310 (319)
T 2y4i_B 263 LSQIG--------MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHP 310 (319)
T ss_dssp CCCSS--------CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----------
T ss_pred CCcCC--------CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCC
Confidence 11111 1225778999999999999999999999999987665444433
No 189
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.2e-36 Score=330.88 Aligned_cols=253 Identities=25% Similarity=0.407 Sum_probs=183.7
Q ss_pred hhcccccccccEEEEEEEE--cceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 569 NFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
.+.+.||+|+||.||+++. .++.||||++.... ....+.+.+|++++.+++||||+++++++...+..++||||+++
T Consensus 18 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (303)
T 2vwi_A 18 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97 (303)
T ss_dssp EEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTT
T ss_pred hhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccC
Confidence 4568999999999999987 45889999987543 33456789999999999999999999999999999999999999
Q ss_pred CChhhhhccc------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 646 GNLQEYLSDI------SKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 646 gsL~~~l~~~------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
++|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp CBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred CchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 9999998642 245699999999999999999999998 9999999999999999999999999998765432
Q ss_pred CC---CcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccc-
Q 002809 720 AN---THVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKS- 794 (878)
Q Consensus 720 ~~---~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~- 794 (878)
.. ........|++.|+|||.+.+ ..++.++||||||++++||++|+.||.......... .... +....
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~~~~-~~~~~~ 247 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM------LTLQ-NDPPSL 247 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH------HHHT-SSCCCT
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH------HHhc-cCCCcc
Confidence 21 112234568999999999875 568999999999999999999999998765533211 1111 11111
Q ss_pred ---ccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 795 ---IVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 795 ---iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
..++.... .....+.+++.+||+.+|++||+++|+++
T Consensus 248 ~~~~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 248 ETGVQDKEMLK----KYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TC-----CCCC----CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccccchhhh----hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11111111 22346789999999999999999999987
No 190
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=326.16 Aligned_cols=246 Identities=26% Similarity=0.460 Sum_probs=193.8
Q ss_pred hhcccccccccEEEEEEEE--cceeEEEEEeccCChhhHHHHHHHHHHHHHh-cccceeeeeecccC------CCcceeE
Q 002809 569 NFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDE------DNQTALI 639 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~------~~~~~lV 639 (878)
.+.+.||+|+||.||+|+. .++.||||++..... ..+.+.+|+.++.++ +||||+++++++.. .+..++|
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv 105 (326)
T 2x7f_A 27 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 105 (326)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEE
T ss_pred EEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEE
Confidence 4568999999999999998 458899999875432 347889999999999 79999999999865 5678999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
|||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 106 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp EECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred EEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 9999999999999876567799999999999999999999998 9999999999999999999999999998765322
Q ss_pred CCCcccccccCCCCccCccccc-----cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccc
Q 002809 720 ANTHVSTVVAGTPGYLDPEYYT-----SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKS 794 (878)
Q Consensus 720 ~~~~~~~~~~gt~~Y~APE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ 794 (878)
. .......|+..|+|||++. +..++.++|||||||++|||++|+.||.......... .+.......
T Consensus 183 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------~~~~~~~~~ 253 (326)
T 2x7f_A 183 V--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-------LIPRNPAPR 253 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-------HHHHSCCCC
T ss_pred c--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH-------HhhcCcccc
Confidence 1 1223356899999999987 5678999999999999999999999998765433211 111111111
Q ss_pred ccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 795 IVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 795 iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.... .....+.+++.+||..+|++||+++|+++
T Consensus 254 ~~~~--------~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 254 LKSK--------KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CSCS--------CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCcc--------ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111 12246789999999999999999999988
No 191
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.1e-35 Score=325.86 Aligned_cols=259 Identities=17% Similarity=0.275 Sum_probs=203.5
Q ss_pred hhhcccccccccEEEEEEEE---cceeEEEEEeccCChhhHHHHHHHHHHHHHhcccc------eeeeeecccCCCccee
Q 002809 568 NNFERTLGKGGFGTVYYGRL---NEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRN------LTSLVGHCDEDNQTAL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~---~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~n------Iv~l~g~~~~~~~~~l 638 (878)
+.+.+.||+|+||.||++.. .++.||||++... ....+.+.+|++++.+++|++ ++++++++...+..++
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~l 94 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICI 94 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEE
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEE
Confidence 45678999999999999986 3488999999754 344577899999999998775 9999999999999999
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC-----------------
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE----------------- 701 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~----------------- 701 (878)
||||+ +++|.+++.......+++..+..++.|+++||+|||+. +|+||||||+|||++.
T Consensus 95 v~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 95 VFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99999 89999999875556799999999999999999999998 9999999999999987
Q ss_pred --CCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 002809 702 --KLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHI 779 (878)
Q Consensus 702 --~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l 779 (878)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||+++||++|+.||......+....
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 245 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245 (339)
T ss_dssp ESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH
T ss_pred ccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 678999999999764322 2235689999999999999999999999999999999999999987765443222
Q ss_pred HHHHHH-----HHhcCCcccccC--------------------Cccc--cccCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 002809 780 RQWVNS-----LIAKGDIKSIVD--------------------PRLQ--EDFDANSVWKAVELAMACLSPTGNQRPTMSQ 832 (878)
Q Consensus 780 ~~~v~~-----~~~~~~~~~iid--------------------~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~e 832 (878)
...... ............ ..+. ..........+.+++.+||+.||++|||++|
T Consensus 246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 325 (339)
T 1z57_A 246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE 325 (339)
T ss_dssp HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence 111100 000000000000 0000 0112345678899999999999999999999
Q ss_pred HHHH
Q 002809 833 VVME 836 (878)
Q Consensus 833 vl~~ 836 (878)
+++.
T Consensus 326 ll~h 329 (339)
T 1z57_A 326 ALKH 329 (339)
T ss_dssp HTTS
T ss_pred HhcC
Confidence 9863
No 192
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=8.6e-37 Score=344.12 Aligned_cols=241 Identities=18% Similarity=0.177 Sum_probs=185.6
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccC---ChhhHHHHHHHH---HHHHHhcccceeeee-------ecccCC
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS---SAQGFQQFQAEV---KLLMRVHHRNLTSLV-------GHCDED 633 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~---~~~~~~~f~~Ei---~~L~~l~H~nIv~l~-------g~~~~~ 633 (878)
.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|+ +.+++++||||++++ +++...
T Consensus 76 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~ 155 (377)
T 3byv_A 76 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 155 (377)
T ss_dssp EEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECT
T ss_pred EEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhcc
Confidence 34678999999999999864 589999999743 344567899999 455556899999998 444433
Q ss_pred C-----------------cceeEeeeccCCChhhhhcccc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecC
Q 002809 634 N-----------------QTALIYEFMANGNLQEYLSDIS-----KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRD 691 (878)
Q Consensus 634 ~-----------------~~~lV~Ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrD 691 (878)
+ ..++||||+ +|+|.+++.... ...+++..++.++.||++||+|||+. +|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrD 231 (377)
T 3byv_A 156 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTY 231 (377)
T ss_dssp TSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 2 378999999 689999997532 12344688899999999999999998 999999
Q ss_pred CCCccEEEcCCCcEEEeecCCccccccCCCCcccccccCCCCccCccccccC-----------CCCCccchhhHHHHHHH
Q 002809 692 VKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSN-----------RLTEKSDVYSFGVVILE 760 (878)
Q Consensus 692 LKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-----------~~t~ksDV~S~Gvvl~e 760 (878)
|||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++||
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 999999999999999999999985321 2234567 999999999887 89999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHH
Q 002809 761 IITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM--ELS 838 (878)
Q Consensus 761 lltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~--~L~ 838 (878)
|++|+.||....... ....+.. .. ......+.+++.+||+.||++||++.|+++ .++
T Consensus 306 lltg~~Pf~~~~~~~---------------~~~~~~~-~~-----~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~ 364 (377)
T 3byv_A 306 IWCADLPITKDAALG---------------GSEWIFR-SC-----KNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 364 (377)
T ss_dssp HHHSSCCC------C---------------CSGGGGS-SC-----CCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred HHHCCCCCccccccc---------------chhhhhh-hc-----cCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence 999999996543211 1111111 00 112346789999999999999999999997 344
Q ss_pred HH
Q 002809 839 EC 840 (878)
Q Consensus 839 ~~ 840 (878)
++
T Consensus 365 ~~ 366 (377)
T 3byv_A 365 QL 366 (377)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 193
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.2e-35 Score=357.88 Aligned_cols=256 Identities=25% Similarity=0.365 Sum_probs=205.6
Q ss_pred hhhcccccccccEEEEEEEEcc-----eeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-----IDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-----~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
+.+.+.||+|+||.||+|+... ..||||++... .....+.|.+|+.++.+++||||+++++++. ++..++|||
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E 470 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIME 470 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEE
Confidence 3456789999999999998742 56999998764 3445578999999999999999999999985 456899999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.++++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 471 ~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~- 545 (656)
T 2j0j_A 471 LCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST- 545 (656)
T ss_dssp CCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred cCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCc-
Confidence 99999999999752 44689999999999999999999998 99999999999999999999999999998764322
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
........+++.|+|||++.+..++.++|||||||++|||++ |+.||......+. ... +..+...
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---~~~----i~~~~~~------- 611 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV---IGR----IENGERL------- 611 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---HHH----HHHTCCC-------
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH---HHH----HHcCCCC-------
Confidence 122233457789999999998899999999999999999997 9999987655431 111 1112111
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAAEM 845 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~e~ 845 (878)
..+......+.+++.+||+.+|++||++.|+++.|++++..+.
T Consensus 612 --~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~k 654 (656)
T 2j0j_A 612 --PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 654 (656)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 1122233578899999999999999999999999999987764
No 194
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7.7e-36 Score=331.73 Aligned_cols=255 Identities=21% Similarity=0.310 Sum_probs=202.9
Q ss_pred hhhcccccccccEEEEEEEEcceeEEEEEeccCChh-----------------hHHHHHHHHHHHHHhcccceeeeeecc
Q 002809 568 NNFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQ-----------------GFQQFQAEVKLLMRVHHRNLTSLVGHC 630 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~ 630 (878)
+.+.+.||+|+||.||+++..++.||||++...... ..+.+.+|++++.+++||||+++++++
T Consensus 33 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 112 (348)
T 2pml_X 33 YRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGII 112 (348)
T ss_dssp EEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEE
T ss_pred eEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 345689999999999999997799999998753221 127899999999999999999999999
Q ss_pred cCCCcceeEeeeccCCChhhh------hccccCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCccEEEcCCC
Q 002809 631 DEDNQTALIYEFMANGNLQEY------LSDISKKVLSSQERLRIAVESAQGLEYLHN-GCKPPIVHRDVKSTNILLNEKL 703 (878)
Q Consensus 631 ~~~~~~~lV~Ey~~~gsL~~~------l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDLKp~NILl~~~~ 703 (878)
...+..++||||+++|+|.++ +.......+++..++.++.|++.||+|||+ . +|+||||||+||+++.++
T Consensus 113 ~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 113 TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKNG 189 (348)
T ss_dssp ESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTTS
T ss_pred eeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCCC
Confidence 999999999999999999999 655446789999999999999999999998 7 999999999999999999
Q ss_pred cEEEeecCCccccccCCCCcccccccCCCCccCccccccC-CCCC-ccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 002809 704 QAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSN-RLTE-KSDVYSFGVVILEIITCKPAISRINEEEKIHIRQ 781 (878)
Q Consensus 704 ~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~t~-ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~ 781 (878)
.+||+|||++...... ......|+..|+|||.+.+. .++. ++||||||++++||++|+.||....... .+.
T Consensus 190 ~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~- 262 (348)
T 2pml_X 190 RVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV--ELF- 262 (348)
T ss_dssp CEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH--HHH-
T ss_pred cEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHH-
Confidence 9999999999865332 22345689999999999877 6666 9999999999999999999998765421 111
Q ss_pred HHHHHHhcCCcccccC------Cccc---cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 782 WVNSLIAKGDIKSIVD------PRLQ---EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 782 ~v~~~~~~~~~~~iid------~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
..+..+...-..+ +... ..........+.+++.+||+.+|++||+++|+++
T Consensus 263 ---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 263 ---NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ---HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1122222111000 0000 0001223457889999999999999999999987
No 195
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.1e-35 Score=331.49 Aligned_cols=247 Identities=24% Similarity=0.412 Sum_probs=199.7
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCCh--------hhHHHHHHHHHHHHHh-cccceeeeeecccCCCcc
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA--------QGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQT 636 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~--------~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~ 636 (878)
+.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|+.++.++ +||||+++++++......
T Consensus 96 y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 175 (365)
T 2y7j_A 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM 175 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEE
T ss_pred cccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEE
Confidence 344589999999999999985 58999999875431 1245688999999999 799999999999999999
Q ss_pred eeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccc
Q 002809 637 ALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSF 716 (878)
Q Consensus 637 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~ 716 (878)
++||||+++++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++..+
T Consensus 176 ~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 176 FLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 999999999999999975 45799999999999999999999998 9999999999999999999999999999876
Q ss_pred ccCCCCcccccccCCCCccCcccccc------CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcC
Q 002809 717 ATDANTHVSTVVAGTPGYLDPEYYTS------NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKG 790 (878)
Q Consensus 717 ~~~~~~~~~~~~~gt~~Y~APE~~~~------~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~ 790 (878)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..+..+
T Consensus 251 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~-------~~i~~~ 320 (365)
T 2y7j_A 251 EPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML-------RMIMEG 320 (365)
T ss_dssp CTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHT
T ss_pred CCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH-------HHHHhC
Confidence 4332 2234579999999999863 35888999999999999999999999876543211 111112
Q ss_pred CcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 791 DIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 791 ~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.... ..+. . ......+.+++.+||+.+|++||+++|+++
T Consensus 321 ~~~~-~~~~-~----~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 321 QYQF-SSPE-W----DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp CCCC-CHHH-H----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCC-CCcc-c----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1100 0000 0 012246789999999999999999999986
No 196
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.7e-35 Score=334.47 Aligned_cols=260 Identities=22% Similarity=0.301 Sum_probs=200.9
Q ss_pred HHhhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhc--------ccceeeeeeccc----
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH--------HRNLTSLVGHCD---- 631 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~--------H~nIv~l~g~~~---- 631 (878)
-.+.+.+.||+|+||.||+|+.. ++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 34566789999999999999875 488999999754 344578899999999996 788999999987
Q ss_pred CCCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC--------
Q 002809 632 EDNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL-------- 703 (878)
Q Consensus 632 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~-------- 703 (878)
.....++||||+ +++|.+++.......+++..++.++.||++||+|||+++ +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhh
Confidence 566899999999 667777776545567999999999999999999999854 899999999999999775
Q ss_pred -----------------------------------------cEEEeecCCccccccCCCCcccccccCCCCccCcccccc
Q 002809 704 -----------------------------------------QAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTS 742 (878)
Q Consensus 704 -----------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~ 742 (878)
.+||+|||+++..... .....||..|+|||++.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHT
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhcC
Confidence 7999999999866432 223468999999999999
Q ss_pred CCCCCccchhhHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHHHHHh--------cCCc-ccccCC----------c
Q 002809 743 NRLTEKSDVYSFGVVILEIITCKPAISRINEEE----KIHIRQWVNSLIA--------KGDI-KSIVDP----------R 799 (878)
Q Consensus 743 ~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~----~~~l~~~v~~~~~--------~~~~-~~iid~----------~ 799 (878)
..++.++|||||||++|||++|+.||....... ...+.. +..... .+.. .+.+.. .
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIAL-IIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHH-HHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHH-HHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 999999999999999999999999997654221 111111 111110 0110 001100 0
Q ss_pred c---------ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 800 L---------QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 800 l---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
. ....+......+.+++.+||+.||++|||++|+++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 00124556678899999999999999999999986
No 197
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5e-36 Score=342.86 Aligned_cols=250 Identities=24% Similarity=0.378 Sum_probs=189.6
Q ss_pred HHhhhcccccccccEEEEEEEEcc--eeEEEEEeccCC--------hhhHHHHHHHHHHHHHhcccceeeeeecccCCCc
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSS--------AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQ 635 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~--------~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~ 635 (878)
..+.+.+.||+|+||.||+|.... +.||||++.... ......+.+|+++|++++||||+++++++.. +.
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc
Confidence 345567899999999999998754 789999987532 1123358899999999999999999999864 45
Q ss_pred ceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC---cEEEeecCC
Q 002809 636 TALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL---QAKLADFGL 712 (878)
Q Consensus 636 ~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~---~~kL~DFGl 712 (878)
.++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+
T Consensus 214 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp EEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred eEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeeccc
Confidence 7899999999999999875 56799999999999999999999998 999999999999997544 599999999
Q ss_pred ccccccCCCCcccccccCCCCccCcccccc---CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhc
Q 002809 713 SKSFATDANTHVSTVVAGTPGYLDPEYYTS---NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAK 789 (878)
Q Consensus 713 a~~~~~~~~~~~~~~~~gt~~Y~APE~~~~---~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~ 789 (878)
++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|++||........ +. ..+..
T Consensus 289 a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~----~~i~~ 359 (419)
T 3i6u_A 289 SKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LK----DQITS 359 (419)
T ss_dssp TTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HH----HHHHT
T ss_pred ceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HH----HHHhc
Confidence 9876432 22334679999999999853 5688899999999999999999999976543211 11 11112
Q ss_pred CCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 790 GDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 790 ~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+.... .+... ......+.+++.+||+.+|++||+++|+++.
T Consensus 360 ~~~~~--~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 GKYNF--IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp TCCCC--CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCC--Cchhh----cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 21110 00000 1123468899999999999999999999873
No 198
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.7e-36 Score=331.80 Aligned_cols=264 Identities=23% Similarity=0.312 Sum_probs=198.0
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccC--------CCc
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDE--------DNQ 635 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--------~~~ 635 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ......+.+|++++++++||||+++++++.. .+.
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 98 (351)
T 3mi9_A 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS 98 (351)
T ss_dssp EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CE
T ss_pred eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCce
Confidence 455689999999999999984 4889999986543 2235678899999999999999999999876 446
Q ss_pred ceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccc
Q 002809 636 TALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKS 715 (878)
Q Consensus 636 ~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~ 715 (878)
.++||||+++ +|.+.+... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 99 ~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 99 IYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp EEEEEECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEeccCC-CHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 8999999975 777777542 34699999999999999999999998 999999999999999999999999999987
Q ss_pred cccCCC--CcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCc
Q 002809 716 FATDAN--THVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDI 792 (878)
Q Consensus 716 ~~~~~~--~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~ 792 (878)
+..... ........||+.|+|||++.+ ..++.++|||||||+++||++|++||........................
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 253 (351)
T 3mi9_A 174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 253 (351)
T ss_dssp CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 642221 122234568999999999876 45899999999999999999999999887654432221111110000000
Q ss_pred ccccCCcccc--------ccC-HHH------HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 793 KSIVDPRLQE--------DFD-ANS------VWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 793 ~~iid~~l~~--------~~~-~~~------~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
...-+..... ... ... ...+.+++.+||+.||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 1100000000 000 011 2357899999999999999999999873
No 199
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.1e-35 Score=341.11 Aligned_cols=198 Identities=25% Similarity=0.336 Sum_probs=172.9
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCChhhHHHHHHHHHHHHHh------cccceeeeeecccCCCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSSAQGFQQFQAEVKLLMRV------HHRNLTSLVGHCDEDNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l------~H~nIv~l~g~~~~~~~~~lV 639 (878)
+.+.+.||+|+||.||+|+... +.||||++... ....+.+.+|++++..+ +|+||+++++++...+..++|
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 177 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEE
Confidence 4567899999999999998754 88999999754 33446788899999888 467999999999999999999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc--EEEeecCCccccc
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ--AKLADFGLSKSFA 717 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~--~kL~DFGla~~~~ 717 (878)
|||+. ++|.+++.......+++..++.++.||++||+|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 178 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 178 FELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp ECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 99995 6999999876666799999999999999999999998 9999999999999999987 9999999997543
Q ss_pred cCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHH
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEE 775 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~ 775 (878)
.. .....||+.|+|||++.+..++.++|||||||++|||++|++||......+
T Consensus 254 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~ 306 (429)
T 3kvw_A 254 QR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306 (429)
T ss_dssp CC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred Cc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 22 223568999999999999999999999999999999999999998876543
No 200
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2e-35 Score=345.01 Aligned_cols=253 Identities=26% Similarity=0.399 Sum_probs=200.5
Q ss_pred HHhhhcccccccccEEEEEEEEc--ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEee
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
..+.+.+.||+|+||.||+++.. +..||+|++.... ......+.+|+.++++++||||+++++++......++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 34567789999999999999985 4789999987643 3345788999999999999999999999999999999999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC---CcEEEeecCCcccccc
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK---LQAKLADFGLSKSFAT 718 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~---~~~kL~DFGla~~~~~ 718 (878)
|+++|+|.+++.. ...+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.+..
T Consensus 117 ~~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 117 CYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999998875 45699999999999999999999998 99999999999999764 4599999999987643
Q ss_pred CCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCC
Q 002809 719 DANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDP 798 (878)
Q Consensus 719 ~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~ 798 (878)
.. ......||+.|+|||++. ..++.++||||+||++|||++|++||......+.. ..+..+... .+.
T Consensus 192 ~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-------~~i~~~~~~--~~~ 258 (494)
T 3lij_A 192 QK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL-------RKVEKGKYT--FDS 258 (494)
T ss_dssp TB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHTCCC--CCS
T ss_pred Cc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhCCCC--CCc
Confidence 22 223456999999999986 46999999999999999999999999877654321 112222211 011
Q ss_pred ccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHH
Q 002809 799 RLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME--LSEC 840 (878)
Q Consensus 799 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~--L~~~ 840 (878)
... ......+.+++.+||+.+|++|||++|+++. +++.
T Consensus 259 ~~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 259 PEW----KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp GGG----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred hhc----ccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 111 1123467899999999999999999999974 5543
No 201
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-35 Score=330.36 Aligned_cols=259 Identities=25% Similarity=0.336 Sum_probs=197.4
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChh-----hHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEe
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQ-----GFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIY 640 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~-----~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~ 640 (878)
+.+.+.||+|+||.||+|+.. ++.||||++...... ..+.+.+|++++.+++||||+++++++...+..++||
T Consensus 12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (346)
T 1ua2_A 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVF 91 (346)
T ss_dssp -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEE
T ss_pred cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEE
Confidence 455689999999999999885 478999998753221 2346889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCC
Q 002809 641 EFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDA 720 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~ 720 (878)
||+++ +|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 92 e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 92 DFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp ECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred EcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 99975 88888865 245688999999999999999999998 99999999999999999999999999998764322
Q ss_pred CCcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC---cccc-
Q 002809 721 NTHVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD---IKSI- 795 (878)
Q Consensus 721 ~~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~---~~~i- 795 (878)
.......||+.|+|||++.+. .++.++|||||||++|||++|.+||......+. +...... ..... ....
T Consensus 167 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~i~~~-~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 167 --RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFET-LGTPTEEQWPDMC 241 (346)
T ss_dssp --CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHH-HCCCCTTTSSSTT
T ss_pred --ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHH-cCCCChhhhhhhc
Confidence 222345689999999999754 588999999999999999999999987665332 1111111 11100 0000
Q ss_pred -----cCCccccccC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 796 -----VDPRLQEDFD-----ANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 796 -----id~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+...-....+ ......+.+++.+||+.+|++|||++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000001 1223578899999999999999999999874
No 202
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.9e-36 Score=342.15 Aligned_cols=194 Identities=23% Similarity=0.388 Sum_probs=162.8
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCC-----Cccee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDED-----NQTAL 638 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~~~l 638 (878)
+.+.+.||+|+||.||+|+... +.||||++... .....+.+.+|+++|++++||||+++++++... ...++
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 107 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence 4557899999999999998754 78999999753 344567899999999999999999999998765 57899
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccccc
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~ 718 (878)
||||++ |+|.++++. ...+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 108 VLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 999986 699999975 56799999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCC--------------------cccccccCCCCccCcccc-ccCCCCCccchhhHHHHHHHHHhCCCC
Q 002809 719 DANT--------------------HVSTVVAGTPGYLDPEYY-TSNRLTEKSDVYSFGVVILEIITCKPA 767 (878)
Q Consensus 719 ~~~~--------------------~~~~~~~gt~~Y~APE~~-~~~~~t~ksDV~S~Gvvl~elltG~~p 767 (878)
.... .......||+.|+|||++ ....++.++|||||||+++||++|..|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence 3211 112456799999999986 566799999999999999999985443
No 203
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.2e-35 Score=348.50 Aligned_cols=248 Identities=22% Similarity=0.385 Sum_probs=200.4
Q ss_pred hcccccccccEEEEEEEEc--ceeEEEEEeccCCh---hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 570 FERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA---QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
+.+.||+|+||.||+++.. ++.||+|++.+... ...+.+.+|++++.+++||||+++++++...+..++||||++
T Consensus 189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~ 268 (543)
T 3c4z_A 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMN 268 (543)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEecc
Confidence 3578999999999999985 48899999975422 234678999999999999999999999999999999999999
Q ss_pred CCChhhhhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 645 NGNLQEYLSDIS--KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 645 ~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+|+|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 269 gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~- 344 (543)
T 3c4z_A 269 GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT- 344 (543)
T ss_dssp TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-
T ss_pred CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-
Confidence 999999997643 45799999999999999999999998 999999999999999999999999999987643321
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQE 802 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~ 802 (878)
.....+||+.|+|||++.+..++.++|||||||++|||++|++||........ ..+...... .+.. .
T Consensus 345 -~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~-~~~~------~--- 411 (543)
T 3c4z_A 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVL-EQAV------T--- 411 (543)
T ss_dssp -CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHH-HCCC------C---
T ss_pred -ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHh-hccc------C---
Confidence 22345799999999999999999999999999999999999999986532110 111111111 1111 1
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 002809 803 DFDANSVWKAVELAMACLSPTGNQRPTM-----SQVVM 835 (878)
Q Consensus 803 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm-----~evl~ 835 (878)
++......+.+++.+||+.+|++||++ +++++
T Consensus 412 -~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 412 -YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred -CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 112223467899999999999999975 56654
No 204
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=8e-36 Score=326.91 Aligned_cols=248 Identities=21% Similarity=0.349 Sum_probs=192.8
Q ss_pred hhhcccccccccEEEEEEEEcc-eeEEEEEeccC--ChhhHHHHHHHHHHHHHhc--ccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSS--SAQGFQQFQAEVKLLMRVH--HRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~--H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+++..+ +.||||++... .....+.+.+|++++.+++ |+||+++++++..++..++|||
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 108 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 108 (313)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-
Confidence 3456899999999999998765 78999998754 3445678999999999997 4999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+.+++|.+++.. ...+++..++.++.|+++||.|||+. +|+||||||+|||+++ +.+||+|||+++........
T Consensus 109 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 109 CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 568899999976 45789999999999999999999998 9999999999999965 89999999999876443332
Q ss_pred cccccccCCCCccCcccccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC
Q 002809 723 HVSTVVAGTPGYLDPEYYTS-----------NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD 791 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~-----------~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~ 791 (878)
.......|++.|+|||.+.+ ..++.++||||||++++||++|+.||........ . .......
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~----~~~~~~~-- 255 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-K----LHAIIDP-- 255 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-H----HHHHHCT--
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH-H----HHHHHhc--
Confidence 23334568999999999875 4688899999999999999999999976543211 1 1111111
Q ss_pred cccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 792 IKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 792 ~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.....++......+.+++.+||+.+|++||+++|+++.
T Consensus 256 -------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 256 -------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp -------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------ccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11111111223467899999999999999999999875
No 205
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.4e-35 Score=318.41 Aligned_cols=244 Identities=23% Similarity=0.371 Sum_probs=193.1
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEec
Confidence 345689999999999999985 5889999987542 22356789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 165 (276)
T 2h6d_A 93 VSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 165 (276)
T ss_dssp CCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred cCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence 999999999976 45689999999999999999999998 99999999999999999999999999997654321
Q ss_pred cccccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRL-TEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
......|++.|+|||.+.+..+ +.++||||||++++||++|+.||......... ..+..+.. .+
T Consensus 166 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-------~~~~~~~~------~~- 230 (276)
T 2h6d_A 166 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF-------KKIRGGVF------YI- 230 (276)
T ss_dssp ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHCCC------CC-
T ss_pred -ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH-------HHhhcCcc------cC-
Confidence 1233468999999999987765 68999999999999999999999876543211 11122211 01
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+......+.+++.+||+.+|++||+++|+++.
T Consensus 231 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 ---PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11122467899999999999999999999874
No 206
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.4e-35 Score=345.56 Aligned_cols=249 Identities=27% Similarity=0.381 Sum_probs=204.2
Q ss_pred HHhhhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEe
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIY 640 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~ 640 (878)
..+.+.+.||+|+||.||+++.. ++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45667789999999999999885 4889999986542 334678999999999999999999999999999999999
Q ss_pred eeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE---cCCCcEEEeecCCccccc
Q 002809 641 EFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL---NEKLQAKLADFGLSKSFA 717 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~ 717 (878)
||+.+|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 106 e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 106 EVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp CCCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999999875 56799999999999999999999998 99999999999999 567899999999998764
Q ss_pred cCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccC
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVD 797 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid 797 (878)
... ......||+.|+|||++.+ .++.++||||+||++|||++|++||......+.. ..+..+...- .
T Consensus 181 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-------~~i~~~~~~~--~ 247 (484)
T 3nyv_A 181 ASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL-------KKVEKGKYTF--E 247 (484)
T ss_dssp CCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHCCCCC--C
T ss_pred ccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHH-------HHHHcCCCCC--C
Confidence 322 2233569999999999876 6999999999999999999999999876654321 1122222110 0
Q ss_pred CccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 798 PRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 798 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
..........+.+++.+||+.+|++|||++|+++.
T Consensus 248 ----~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 ----LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp ----SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00111233467899999999999999999999874
No 207
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.6e-35 Score=343.47 Aligned_cols=250 Identities=27% Similarity=0.384 Sum_probs=202.0
Q ss_pred HHHhhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEe
Q 002809 565 KITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIY 640 (878)
Q Consensus 565 ~~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~ 640 (878)
...+.+.+.||+|+||.||+++.. ++.||||++... .......+.+|++++++++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 345677899999999999999985 488999998643 2234578899999999999999999999999999999999
Q ss_pred eeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEc---CCCcEEEeecCCccccc
Q 002809 641 EFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLN---EKLQAKLADFGLSKSFA 717 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~ 717 (878)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++.+.
T Consensus 101 e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 99999999999875 45699999999999999999999998 999999999999995 45679999999998664
Q ss_pred cCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccC
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVD 797 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid 797 (878)
... ......||+.|+|||++.+ .++.++||||+||++|||++|++||......+.. ..+..+.... +
T Consensus 176 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-------~~i~~~~~~~--~ 242 (486)
T 3mwu_A 176 QNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL-------KRVETGKYAF--D 242 (486)
T ss_dssp CC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHTCCCS--C
T ss_pred CCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhCCCCC--C
Confidence 322 2234569999999999876 5899999999999999999999999876654321 1122222110 0
Q ss_pred CccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 798 PRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 798 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
. .........+.+++.+||+.+|++|||+.|+++.
T Consensus 243 ~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 L----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp S----GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred C----cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0011223467899999999999999999999874
No 208
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.4e-35 Score=318.16 Aligned_cols=246 Identities=26% Similarity=0.367 Sum_probs=200.0
Q ss_pred hhcccccccccEEEEEEEEcc--eeEEEEEeccCC---------hhhHHHHHHHHHHHHHhc-ccceeeeeecccCCCcc
Q 002809 569 NFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSS---------AQGFQQFQAEVKLLMRVH-HRNLTSLVGHCDEDNQT 636 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~---------~~~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~ 636 (878)
.+.+.||+|+||.||+++... +.||||++.... ....+.+.+|++++.+++ ||||+++++++..++..
T Consensus 20 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 99 (298)
T 1phk_A 20 EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF 99 (298)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred ceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeE
Confidence 456889999999999999853 889999997543 123467889999999996 99999999999999999
Q ss_pred eeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccc
Q 002809 637 ALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSF 716 (878)
Q Consensus 637 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~ 716 (878)
++||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 100 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 100 FLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 999999999999999976 45799999999999999999999998 9999999999999999999999999999876
Q ss_pred ccCCCCcccccccCCCCccCccccc------cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcC
Q 002809 717 ATDANTHVSTVVAGTPGYLDPEYYT------SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKG 790 (878)
Q Consensus 717 ~~~~~~~~~~~~~gt~~Y~APE~~~------~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~ 790 (878)
.... ......|++.|+|||++. ...++.++||||||++++||++|+.||......... ..+..+
T Consensus 175 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-------~~~~~~ 244 (298)
T 1phk_A 175 DPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML-------RMIMSG 244 (298)
T ss_dssp CTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHT
T ss_pred CCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH-------HHHhcC
Confidence 4322 223356899999999985 456889999999999999999999999876543211 111112
Q ss_pred CcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 791 DIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 791 ~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
... ...+ ........+.+++.+||+.+|++||+++|+++
T Consensus 245 ~~~-~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 245 NYQ-FGSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCC-CCTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred Ccc-cCcc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111 0001 11123346889999999999999999999986
No 209
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=8e-36 Score=324.63 Aligned_cols=248 Identities=21% Similarity=0.397 Sum_probs=196.5
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+|+.. +..||+|++........+.+.+|++++.+++||||+++++++..++..++||||+++
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 100 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG 100 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTT
T ss_pred eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCC
Confidence 345688999999999999986 478999999877666678899999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
++|.+++... ...+++..+..++.|+++||.|||+. +++||||||+||+++.++.+||+|||++....... ...
T Consensus 101 ~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~ 174 (302)
T 2j7t_A 101 GAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--QKR 174 (302)
T ss_dssp EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--HC-
T ss_pred CcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc--ccc
Confidence 9999998652 45699999999999999999999998 99999999999999999999999999875432111 112
Q ss_pred ccccCCCCccCcccc-----ccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 726 TVVAGTPGYLDPEYY-----TSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~-----~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
....|+..|+|||++ ....++.++||||||++++||++|+.||........ ...... +......
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~-~~~~~~~---- 243 (302)
T 2j7t_A 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV------LLKIAK-SDPPTLL---- 243 (302)
T ss_dssp ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHH-SCCCCCS----
T ss_pred ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH------HHHHhc-cCCcccC----
Confidence 234689999999998 366789999999999999999999999987664321 111111 1111111
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.+......+.+++.+||+.+|++||+++|+++
T Consensus 244 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 ---TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ---SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ---CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11122346789999999999999999999986
No 210
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.2e-35 Score=320.97 Aligned_cols=246 Identities=25% Similarity=0.395 Sum_probs=198.7
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeeccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMAN 645 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 645 (878)
+.+.+.||+|+||.||+|+.. ++.||+|++.... ..+.+.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 31 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 108 (314)
T 3com_A 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA 108 (314)
T ss_dssp EEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCC
Confidence 455689999999999999986 4889999997643 346789999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCccc
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVS 725 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 725 (878)
++|.+++.. ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....... ...
T Consensus 109 ~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~ 182 (314)
T 3com_A 109 GSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM--AKR 182 (314)
T ss_dssp EEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--SCB
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--ccc
Confidence 999999863 245799999999999999999999998 99999999999999999999999999997664322 122
Q ss_pred ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccC
Q 002809 726 TVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFD 805 (878)
Q Consensus 726 ~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~ 805 (878)
....|+..|+|||.+.+..++.++||||||++++||++|+.||.......... ........... .+
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------~~~~~~~~~~~-------~~ 248 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-------MIPTNPPPTFR-------KP 248 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-------HHHHSCCCCCS-------SG
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-------HHhcCCCcccC-------Cc
Confidence 33568999999999999999999999999999999999999998765433211 11111111110 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 806 ANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 806 ~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
......+.+++.+||+.+|++||++.++++
T Consensus 249 ~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 ELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 112346789999999999999999999987
No 211
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.7e-35 Score=321.20 Aligned_cols=254 Identities=20% Similarity=0.313 Sum_probs=195.9
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhc-ccceeeeeecccC--CCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH-HRNLTSLVGHCDE--DNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~--~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... .+.+.+|++++.+++ ||||+++++++.. ....++||||
T Consensus 38 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~ 114 (330)
T 3nsz_A 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114 (330)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred eEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence 345689999999999999874 4889999997543 467899999999997 9999999999987 6678999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC-cEEEeecCCccccccCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL-QAKLADFGLSKSFATDAN 721 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~-~~kL~DFGla~~~~~~~~ 721 (878)
+++++|.+++.. +++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++.......
T Consensus 115 ~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 115 VNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp CCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred cCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 999999999854 88999999999999999999998 999999999999999777 899999999987643322
Q ss_pred CcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH--------HHHhcCCc
Q 002809 722 THVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVN--------SLIAKGDI 792 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~--------~~~~~~~~ 792 (878)
.....|+..|+|||.+.+ ..++.++|||||||+++||++|+.||........ .+..... ..+.....
T Consensus 187 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 187 ---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD-QLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp ---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH-HHHHHHHHHCHHHHHHHHHHTTC
T ss_pred ---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH-HHHHHHHhcCCchhhhHHHHhcc
Confidence 233568999999999877 6789999999999999999999999965433211 1111110 01111100
Q ss_pred c------cc--------cCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 793 K------SI--------VDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 793 ~------~i--------id~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
. +. ...............++.+++.+||+.||++|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 00 00000011111234578899999999999999999999863
No 212
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.8e-36 Score=337.22 Aligned_cols=249 Identities=12% Similarity=0.059 Sum_probs=178.6
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCCh---hhHHHHHHHHHHHHHh--cccceeeeee-------cccCC-
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA---QGFQQFQAEVKLLMRV--HHRNLTSLVG-------HCDED- 633 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ei~~L~~l--~H~nIv~l~g-------~~~~~- 633 (878)
.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++..+ +||||++++. .+...
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETT
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCC
Confidence 45689999999999999975 48899999987543 3456778886666555 5999888553 22221
Q ss_pred ----------------CcceeEeeeccCCChhhhhccccCCCCCHHHH------HHHHHHHHHHHHHHHhCCCCCeEecC
Q 002809 634 ----------------NQTALIYEFMANGNLQEYLSDISKKVLSSQER------LRIAVESAQGLEYLHNGCKPPIVHRD 691 (878)
Q Consensus 634 ----------------~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~------~~i~~qia~gL~yLH~~~~~~ivHrD 691 (878)
...++||||++ |+|.+++.... ..+++..+ ..++.||++||+|||++ +|+|||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrD 219 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGH 219 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCc
Confidence 33799999998 89999997642 23456666 78889999999999998 999999
Q ss_pred CCCccEEEcCCCcEEEeecCCccccccCCCCcccccccCCCCccCcccccc--CCCCCccchhhHHHHHHHHHhCCCCCC
Q 002809 692 VKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTS--NRLTEKSDVYSFGVVILEIITCKPAIS 769 (878)
Q Consensus 692 LKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~t~ksDV~S~Gvvl~elltG~~p~~ 769 (878)
|||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999865321 113456799999999987 679999999999999999999999998
Q ss_pred CCChHHHHHHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 770 RINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 770 ~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
......... .............+...........+.+++.+||+.+|++||+++|+++
T Consensus 295 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 295 LVTPGIKGS--------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp BCCTTCTTC--------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CcCcccccc--------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 764321100 0000000011111111111233457889999999999999999999976
No 213
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.1e-35 Score=356.72 Aligned_cols=244 Identities=23% Similarity=0.346 Sum_probs=201.9
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccC---ChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEee
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSS---SAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~---~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E 641 (878)
+.+.+.||+|+||.||+++..+ +.||||++.+. .....+.+..|..++..+ +||+|+++++++...+..++|||
T Consensus 343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E 422 (674)
T 3pfq_A 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 422 (674)
T ss_dssp EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence 3456899999999999999865 67999999753 223456788999999988 79999999999999999999999
Q ss_pred eccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 642 FMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 642 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
|+++|+|.++++. ...+++..++.++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++......
T Consensus 423 ~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~- 496 (674)
T 3pfq_A 423 YVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG- 496 (674)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-
T ss_pred CcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCC-
Confidence 9999999999986 45699999999999999999999998 99999999999999999999999999998643222
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ 801 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~ 801 (878)
......+||+.|+|||++.+..++.++|||||||++|||++|++||...+..+. .. .+.++.+
T Consensus 497 -~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~------~~-~i~~~~~--------- 559 (674)
T 3pfq_A 497 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL------FQ-SIMEHNV--------- 559 (674)
T ss_dssp -CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HH-HHHSSCC---------
T ss_pred -cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH------HH-HHHhCCC---------
Confidence 223456799999999999999999999999999999999999999987665331 11 1112211
Q ss_pred cccCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 002809 802 EDFDANSVWKAVELAMACLSPTGNQRPTM-----SQVVM 835 (878)
Q Consensus 802 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm-----~evl~ 835 (878)
.++.....++.+|+.+||+.+|++||++ +||++
T Consensus 560 -~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 -AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1122233468899999999999999998 66654
No 214
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.6e-35 Score=343.83 Aligned_cols=247 Identities=29% Similarity=0.396 Sum_probs=198.5
Q ss_pred hhhcccccccccEEEEEEEEcc--eeEEEEEeccCCh-------------hhHHHHHHHHHHHHHhcccceeeeeecccC
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSSA-------------QGFQQFQAEVKLLMRVHHRNLTSLVGHCDE 632 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~~-------------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~ 632 (878)
+.+.+.||+|+||.||+++... ..||+|++..... ...+.+.+|++++++++||||+++++++..
T Consensus 38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 117 (504)
T 3q5i_A 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED 117 (504)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4556899999999999999854 7899999875421 234678999999999999999999999999
Q ss_pred CCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC---cEEEee
Q 002809 633 DNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL---QAKLAD 709 (878)
Q Consensus 633 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~---~~kL~D 709 (878)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 118 ~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 118 KKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred CCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 9999999999999999999875 45699999999999999999999998 999999999999999876 699999
Q ss_pred cCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhc
Q 002809 710 FGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAK 789 (878)
Q Consensus 710 FGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~ 789 (878)
||+++.+.... ......||+.|+|||++. ..++.++||||+||++|+|++|++||......+.. ..+..
T Consensus 193 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-------~~i~~ 261 (504)
T 3q5i_A 193 FGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII-------KKVEK 261 (504)
T ss_dssp CTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHH
T ss_pred CCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHc
Confidence 99998764332 223456999999999987 46999999999999999999999999876654321 11222
Q ss_pred CCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 790 GDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 790 ~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+.... +.... .....++.+++.+||+.+|.+|||++|+++.
T Consensus 262 ~~~~~--~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 GKYYF--DFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCCC--CHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCC--Ccccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 22110 00000 1123468899999999999999999999864
No 215
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.3e-35 Score=324.76 Aligned_cols=250 Identities=24% Similarity=0.384 Sum_probs=195.2
Q ss_pred HHHhhhcccccccccEEEEEEEEcc--eeEEEEEeccCCh--------hhHHHHHHHHHHHHHhcccceeeeeecccCCC
Q 002809 565 KITNNFERTLGKGGFGTVYYGRLNE--IDVAVKMLSSSSA--------QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN 634 (878)
Q Consensus 565 ~~t~~f~~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~~--------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~ 634 (878)
.-.+.+.+.||+|+||.||+|+... +.||||++..... .....+.+|++++.+++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 3456677899999999999998754 8899999875421 22346889999999999999999999987655
Q ss_pred cceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc---EEEeecC
Q 002809 635 QTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ---AKLADFG 711 (878)
Q Consensus 635 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~---~kL~DFG 711 (878)
.++||||+++|+|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp -EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred -eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 8999999999999999875 56799999999999999999999998 9999999999999987664 9999999
Q ss_pred CccccccCCCCcccccccCCCCccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHh
Q 002809 712 LSKSFATDANTHVSTVVAGTPGYLDPEYYT---SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIA 788 (878)
Q Consensus 712 la~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~ 788 (878)
+++..... .......|++.|+|||++. ...++.++|||||||++|||++|+.||........ +.. .+.
T Consensus 163 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~----~~~ 233 (322)
T 2ycf_A 163 HSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKD----QIT 233 (322)
T ss_dssp TCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHH----HHH
T ss_pred cceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHH----HHH
Confidence 99865322 2223456899999999974 56789999999999999999999999976543211 111 111
Q ss_pred cCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 789 KGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 789 ~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.+.... .+... ......+.+++.+||+.+|++||+++|+++
T Consensus 234 ~~~~~~--~~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 SGKYNF--IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HTCCCC--CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hCcccc--Cchhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 121110 00111 112346789999999999999999999986
No 216
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.7e-35 Score=320.02 Aligned_cols=259 Identities=22% Similarity=0.321 Sum_probs=199.0
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (299)
T 2r3i_A 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85 (299)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc
Confidence 44678999999999999885 4889999987543 2234678899999999999999999999999999999999997
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHV 724 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 724 (878)
|+|.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 86 -~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~ 159 (299)
T 2r3i_A 86 -QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RT 159 (299)
T ss_dssp -EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS--BC
T ss_pred -CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc--cc
Confidence 6999999875556799999999999999999999998 99999999999999999999999999987653322 12
Q ss_pred cccccCCCCccCccccccCC-CCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC--ccc-----cc
Q 002809 725 STVVAGTPGYLDPEYYTSNR-LTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD--IKS-----IV 796 (878)
Q Consensus 725 ~~~~~gt~~Y~APE~~~~~~-~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~--~~~-----ii 796 (878)
.....|++.|+|||.+.+.. ++.++|||||||+++||++|+.||......+. +.......-.... ... ..
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTSMPDY 237 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHHHhCCCchhhhhHhhcCccc
Confidence 23346899999999998765 79999999999999999999999987665332 1111111100000 000 00
Q ss_pred CCcccc----c---cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 797 DPRLQE----D---FDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 797 d~~l~~----~---~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.+.+.. . .......++.+++.+||+.||++||+++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 001100 0 00112346789999999999999999999976
No 217
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-35 Score=332.75 Aligned_cols=256 Identities=20% Similarity=0.254 Sum_probs=194.3
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccC-------------
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDE------------- 632 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~------------- 632 (878)
+.+.+.||+|+||.||+|+.. ++.||||++..... ...+|+++++.++||||+++++++..
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~ 84 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD 84 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence 455689999999999999874 48899999875432 23479999999999999999998833
Q ss_pred -------------------------CCcceeEeeeccCCChhhhhccc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 002809 633 -------------------------DNQTALIYEFMANGNLQEYLSDI--SKKVLSSQERLRIAVESAQGLEYLHNGCKP 685 (878)
Q Consensus 633 -------------------------~~~~~lV~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~ 685 (878)
....++||||++ |+|.+.+... ....+++..+..++.|+++||+|||+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 160 (383)
T 3eb0_A 85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL--- 160 (383)
T ss_dssp -------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 334789999998 5888877642 356799999999999999999999998
Q ss_pred CeEecCCCCccEEEc-CCCcEEEeecCCccccccCCCCcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHh
Q 002809 686 PIVHRDVKSTNILLN-EKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIIT 763 (878)
Q Consensus 686 ~ivHrDLKp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~ellt 763 (878)
+|+||||||+|||++ .++.+||+|||+++.+.... ......||..|+|||++.+. .++.++||||+||+++||++
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 999999999999998 68899999999998764332 22335689999999998765 58999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHH--------h-cC-----CcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCC
Q 002809 764 CKPAISRINEEEKIHIRQWVNSLI--------A-KG-----DIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPT 829 (878)
Q Consensus 764 G~~p~~~~~~~~~~~l~~~v~~~~--------~-~~-----~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs 829 (878)
|++||......+.. ...+...- . .. .........+...++......+.+++.+||+.+|++|||
T Consensus 238 g~~pf~~~~~~~~~--~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 315 (383)
T 3eb0_A 238 GKPLFSGETSIDQL--VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN 315 (383)
T ss_dssp SSCSSCCSSHHHHH--HHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred CCCCCCCCChHHHH--HHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 99999886654322 11111000 0 00 011111111111122334456889999999999999999
Q ss_pred HHHHHHH
Q 002809 830 MSQVVME 836 (878)
Q Consensus 830 m~evl~~ 836 (878)
+.|+++.
T Consensus 316 ~~e~l~h 322 (383)
T 3eb0_A 316 PYEAMAH 322 (383)
T ss_dssp HHHHHTS
T ss_pred HHHHhcC
Confidence 9999863
No 218
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.9e-35 Score=329.96 Aligned_cols=259 Identities=22% Similarity=0.351 Sum_probs=198.2
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCC-----CcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDED-----NQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~~~lV 639 (878)
+.+.+.||+|+||.||+++.. +..||||++.... ....+.+.+|++++.+++||||+++++++... ...++|
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv 108 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIV 108 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEE
Confidence 455689999999999999875 4889999997543 34457899999999999999999999998654 468999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
+||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 109 ~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 109 QDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 99997 599998864 4599999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCC-cccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCc---cc
Q 002809 720 ANT-HVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDI---KS 794 (878)
Q Consensus 720 ~~~-~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~---~~ 794 (878)
... .......||+.|+|||++.+ ..++.++|||||||+++||++|++||......+..... . ........ ..
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i--~-~~~~~~~~~~~~~ 258 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI--L-GILGSPSQEDLNC 258 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHH--H-HHHCSCCHHHHHT
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHH--H-HHhCCCCHHHHHH
Confidence 221 11234579999999998754 45899999999999999999999999876654322111 1 11000000 00
Q ss_pred ------------ccCCc-c-ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 795 ------------IVDPR-L-QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 795 ------------iid~~-l-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
...+. . ..........++.+++.+||+.||++|||++|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0 000111223468899999999999999999999874
No 219
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.2e-35 Score=322.56 Aligned_cols=258 Identities=23% Similarity=0.359 Sum_probs=198.7
Q ss_pred hhhcccccccccEEEEEEEEc---ceeEEEEEeccCCh--hhHHHHHHHHHHHHHh---cccceeeeeeccc-----CCC
Q 002809 568 NNFERTLGKGGFGTVYYGRLN---EIDVAVKMLSSSSA--QGFQQFQAEVKLLMRV---HHRNLTSLVGHCD-----EDN 634 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~---~~~vAvK~l~~~~~--~~~~~f~~Ei~~L~~l---~H~nIv~l~g~~~-----~~~ 634 (878)
+.+.+.||+|+||.||+++.. ++.||+|++..... .....+.+|+.+++.+ +||||+++++++. ...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 92 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence 345689999999999999873 47899999874322 2234567788877777 7999999999986 567
Q ss_pred cceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcc
Q 002809 635 QTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSK 714 (878)
Q Consensus 635 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~ 714 (878)
..++||||++ |+|.+++.......+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 93 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 93 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred eEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 7899999997 6999999876566799999999999999999999998 99999999999999999999999999997
Q ss_pred ccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC---
Q 002809 715 SFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD--- 791 (878)
Q Consensus 715 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~--- 791 (878)
..... .......|+..|+|||++.+..++.++|||||||++|||++|++||......... ...+ .......
T Consensus 169 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~i~-~~~~~~~~~~ 242 (326)
T 1blx_A 169 IYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL--GKIL-DVIGLPGEED 242 (326)
T ss_dssp CCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHH-HHHCCCCGGG
T ss_pred cccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHHH-HHcCCCCccc
Confidence 65322 1223456899999999999999999999999999999999999999876654321 1111 1111000
Q ss_pred ccc-------ccC---CccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 792 IKS-------IVD---PRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 792 ~~~-------iid---~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
... .+. ..............+.+++.+||+.+|++||+++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 000 00001111223456789999999999999999999985
No 220
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=324.89 Aligned_cols=259 Identities=23% Similarity=0.331 Sum_probs=192.1
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeeccc--------------C
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCD--------------E 632 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~--------------~ 632 (878)
.+.+.||+|+||.||+|+.. ++.||+|++........+.+.+|++++++++||||+++++++. .
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~ 93 (320)
T 2i6l_A 14 MDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTE 93 (320)
T ss_dssp EEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCS
T ss_pred eEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccc
Confidence 45678999999999999986 4889999998877777889999999999999999999998763 4
Q ss_pred CCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEc-CCCcEEEeecC
Q 002809 633 DNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLN-EKLQAKLADFG 711 (878)
Q Consensus 633 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~-~~~~~kL~DFG 711 (878)
....++||||++ |+|.+++.. ..+++..++.++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||
T Consensus 94 ~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 94 LNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp CSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred cCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccCc
Confidence 467899999997 699999864 5689999999999999999999998 999999999999997 56799999999
Q ss_pred CccccccCCC-CcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHh-
Q 002809 712 LSKSFATDAN-THVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIA- 788 (878)
Q Consensus 712 la~~~~~~~~-~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~- 788 (878)
+++....... ........++..|+|||.+.+ ..++.++|||||||+++||++|+.||......+... ........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--~~~~~~~~~ 244 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ--LILESIPVV 244 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHSCCC
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHhcCCC
Confidence 9987643211 111223457899999998865 678999999999999999999999998776533211 11110000
Q ss_pred --------cCCcccccCCccc------cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 789 --------KGDIKSIVDPRLQ------EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 789 --------~~~~~~iid~~l~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
...+...+..... .........++.+++.+||+.+|++||+++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000000000000 00111234578899999999999999999999863
No 221
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.9e-35 Score=332.10 Aligned_cols=252 Identities=24% Similarity=0.365 Sum_probs=180.9
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCC------Cccee
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDED------NQTAL 638 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~------~~~~l 638 (878)
.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|++++++++||||+++++++... ...++
T Consensus 32 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~l 111 (367)
T 2fst_X 32 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111 (367)
T ss_dssp EEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEE
T ss_pred EEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEE
Confidence 45688999999999999864 488999998753 344567889999999999999999999998654 56799
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccccc
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~ 718 (878)
|+|++ +++|.++++. ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 112 v~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 112 VTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp EEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred Eeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 99999 7899998864 5699999999999999999999998 999999999999999999999999999976532
Q ss_pred CCCCcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC---ccc
Q 002809 719 DANTHVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD---IKS 794 (878)
Q Consensus 719 ~~~~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~---~~~ 794 (878)
. .....||..|+|||++.+ ..++.++|||||||+++||++|++||......+.... +........ +..
T Consensus 185 ~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~---i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 185 E-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL---ILRLVGTPGAELLKK 256 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCSCCHHHHTT
T ss_pred c-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhCCCCHHHHHH
Confidence 1 233568999999999877 6789999999999999999999999987765432211 111111000 000
Q ss_pred cc---------------CCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 795 IV---------------DPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 795 ii---------------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+. ...+. .........+.+|+.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHH-HHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhHHHHHHHhccCCCCCCCHH-HHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00 00000 0001123467899999999999999999999874
No 222
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=7.2e-36 Score=322.81 Aligned_cols=247 Identities=22% Similarity=0.348 Sum_probs=182.7
Q ss_pred hhcccccccccEEEEEEEE--cceeEEEEEeccCC-hhh-HHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSS-AQG-FQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~-~~~-~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+++. .++.||+|++.... ... .+.+.++...++.++||||+++++++..++..++||||++
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 89 (290)
T 3fme_A 10 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD 89 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS
T ss_pred hhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc
Confidence 4568999999999999998 45889999997653 222 2334455556788899999999999999999999999997
Q ss_pred CCChhhhhccc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 645 NGNLQEYLSDI--SKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 645 ~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
|+|.+++... ....+++..++.++.|++.||+|||+++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 90 -~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 164 (290)
T 3fme_A 90 -TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV-- 164 (290)
T ss_dssp -EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred -cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccccc--
Confidence 5888887542 3567999999999999999999999842 89999999999999999999999999998664322
Q ss_pred cccccccCCCCccCcccc----ccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCC
Q 002809 723 HVSTVVAGTPGYLDPEYY----TSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDP 798 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~----~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~ 798 (878)
......|++.|+|||++ .+..++.++|||||||+++||++|+.||........ .+. ....... ....
T Consensus 165 -~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~----~~~~~~~-~~~~-- 235 (290)
T 3fme_A 165 -AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-QLK----QVVEEPS-PQLP-- 235 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-HHH----HHHHSCC-CCCC--
T ss_pred -cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH-HHH----HHhccCC-CCcc--
Confidence 22234689999999996 566789999999999999999999999986433221 111 1111111 1110
Q ss_pred ccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 799 RLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 799 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
......++.+++.+||+.+|++|||++|+++
T Consensus 236 ------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 ------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1112346789999999999999999999988
No 223
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.2e-34 Score=325.89 Aligned_cols=258 Identities=21% Similarity=0.288 Sum_probs=190.2
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCC------cce
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN------QTA 637 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~------~~~ 637 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 106 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence 345689999999999999875 488999998753 3445678899999999999999999999987654 679
Q ss_pred eEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccc
Q 002809 638 LIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFA 717 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 717 (878)
+||||++ |+|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 107 lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 107 IVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred EEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 9999997 57888775 3489999999999999999999998 99999999999999999999999999998653
Q ss_pred cCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHH-H---------------
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIR-Q--------------- 781 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~-~--------------- 781 (878)
.. .......||+.|+|||++.+..++.++|||||||+++||++|+.||...+..+..... +
T Consensus 179 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 255 (371)
T 2xrw_A 179 TS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCH
T ss_pred cc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 22 1223356899999999999999999999999999999999999999876653321100 0
Q ss_pred HHHHHHhcCC------cccccCCccccc---cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 782 WVNSLIAKGD------IKSIVDPRLQED---FDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 782 ~v~~~~~~~~------~~~iid~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+........ ....+....... ........+.+++.+||+.||++|||++|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000 000000000000 011235678899999999999999999999884
No 224
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.7e-35 Score=325.39 Aligned_cols=257 Identities=23% Similarity=0.359 Sum_probs=196.5
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHHHHHHhcccceeeeeecccCC-----CcceeEe
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDED-----NQTALIY 640 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~~~lV~ 640 (878)
.+.+.||+|+||.||+|+.. ++.||||++.... ......+.+|++++++++||||+++++++... ...++||
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 93 (353)
T 2b9h_A 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ 93 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEE
T ss_pred EEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEE
Confidence 45689999999999999986 5889999997543 34456788999999999999999999987654 6789999
Q ss_pred eeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCC
Q 002809 641 EFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDA 720 (878)
Q Consensus 641 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~ 720 (878)
||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 94 e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 94 ELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp CCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred eccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 9997 699998874 4699999999999999999999998 99999999999999999999999999998764322
Q ss_pred CCc--------ccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCC
Q 002809 721 NTH--------VSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGD 791 (878)
Q Consensus 721 ~~~--------~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~ 791 (878)
... ......||+.|+|||++.+ ..++.++|||||||+++||++|++||........... +........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~ 243 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL---IFGIIGTPH 243 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCCCC
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH---HHHHhCCCc
Confidence 111 1123468999999998764 6789999999999999999999999988765432211 111111100
Q ss_pred ----cccccCCc-------c---c----cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 792 ----IKSIVDPR-------L---Q----EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 792 ----~~~iid~~-------l---~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
...+..++ + . .........++.+++.+||+.||++||+++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 0 0 0001123356789999999999999999999987
No 225
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3e-35 Score=333.62 Aligned_cols=257 Identities=21% Similarity=0.282 Sum_probs=192.1
Q ss_pred hhhcccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCC------cceeEe
Q 002809 568 NNFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDN------QTALIY 640 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~------~~~lV~ 640 (878)
|.+.+.||+|+||.||+|+... ..||+|++..... ...+|+++++.++||||+++++++...+ ..++||
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 4567899999999999999865 6699998865432 2247999999999999999999985433 378999
Q ss_pred eeccCCChhhhhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEc-CCCcEEEeecCCcccccc
Q 002809 641 EFMANGNLQEYLSD-ISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLN-EKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 641 Ey~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~-~~~~~kL~DFGla~~~~~ 718 (878)
||++++.+...... .....+++..++.++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.+..
T Consensus 118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 99986544333321 1256799999999999999999999998 999999999999999 799999999999987643
Q ss_pred CCCCcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHH----------H
Q 002809 719 DANTHVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSL----------I 787 (878)
Q Consensus 719 ~~~~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~----------~ 787 (878)
... .....||+.|+|||++.+. .++.++|||||||++|||++|++||......+.. .+.+... .
T Consensus 195 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l--~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 195 GEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQL--VEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp TCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHHHHHH
T ss_pred CCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCCHHHHHhh
Confidence 322 2235689999999998764 5899999999999999999999999887654322 1111110 0
Q ss_pred ----hcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 788 ----AKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 788 ----~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
........-...+...+......++.+++.+||+.||++|||+.|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0000111111111111222234578899999999999999999999874
No 226
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.8e-35 Score=329.36 Aligned_cols=257 Identities=24% Similarity=0.311 Sum_probs=189.9
Q ss_pred hhcccccccccEEEEEEEEcc-eeEEEEEeccCCh-----------hhHHHHHHHHHHHHHhcccceeeeeeccc-----
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSA-----------QGFQQFQAEVKLLMRVHHRNLTSLVGHCD----- 631 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~-----------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~----- 631 (878)
.+.+.||+|+||.||+|+... ..||||++..... ...+.+.+|++++.+++||||+++++++.
T Consensus 25 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 104 (362)
T 3pg1_A 25 TVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEP 104 (362)
T ss_dssp EEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTT
T ss_pred EEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCC
Confidence 345899999999999998755 8899999864321 22478999999999999999999999983
Q ss_pred CCCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecC
Q 002809 632 EDNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFG 711 (878)
Q Consensus 632 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFG 711 (878)
.....++||||++ |+|.+++.. .+..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 105 ~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 105 AMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFN 179 (362)
T ss_dssp TCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCTT
T ss_pred CcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEEecC
Confidence 3446799999997 688888874 345799999999999999999999998 99999999999999999999999999
Q ss_pred CccccccCCCCcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcC
Q 002809 712 LSKSFATDANTHVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKG 790 (878)
Q Consensus 712 la~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~ 790 (878)
+++...... ......|++.|+|||++.+ ..++.++|||||||+++||++|+.||......+... ..+ ......
T Consensus 180 ~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--~i~-~~~~~~ 253 (362)
T 3pg1_A 180 LAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN--KIV-EVVGTP 253 (362)
T ss_dssp C------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHH-HHHCCC
T ss_pred ccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH--HHH-HHcCCC
Confidence 997543221 2233568899999999876 678999999999999999999999998766433221 111 111000
Q ss_pred Ccc-----------ccc-------CCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 791 DIK-----------SIV-------DPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 791 ~~~-----------~ii-------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
... ..+ ...............+.+++.+||+.+|++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000 000 0000011112234468899999999999999999999874
No 227
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=337.67 Aligned_cols=259 Identities=22% Similarity=0.313 Sum_probs=180.8
Q ss_pred cccccccccEEEEEEEEc----ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecc--cCCCcceeEeeecc
Q 002809 571 ERTLGKGGFGTVYYGRLN----EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHC--DEDNQTALIYEFMA 644 (878)
Q Consensus 571 ~~~LG~G~fG~Vy~~~~~----~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~--~~~~~~~lV~Ey~~ 644 (878)
.+.||+|+||.||+|+.. +..||||++..... ...+.+|+++|++++||||+++++++ ..+...++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 458999999999999965 47799999975532 35788999999999999999999999 45778999999996
Q ss_pred CCChhhhhcccc-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE----cCCCcEEEeecCCc
Q 002809 645 NGNLQEYLSDIS-------KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL----NEKLQAKLADFGLS 713 (878)
Q Consensus 645 ~gsL~~~l~~~~-------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl----~~~~~~kL~DFGla 713 (878)
|+|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 58888875322 22499999999999999999999998 99999999999999 77889999999999
Q ss_pred cccccCCC-CcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCChHH-------HHHHHHHHH
Q 002809 714 KSFATDAN-THVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINEEE-------KIHIRQWVN 784 (878)
Q Consensus 714 ~~~~~~~~-~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~-------~~~l~~~v~ 784 (878)
+.+..... ........||+.|+|||++.+. .++.++|||||||++|||++|++||....... ...+.....
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 87643211 1222346789999999999874 58999999999999999999999997654321 011111111
Q ss_pred HHHhcCC---cccccC------------Ccccccc---------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 785 SLIAKGD---IKSIVD------------PRLQEDF---------DANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 785 ~~~~~~~---~~~iid------------~~l~~~~---------~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+.... ...+.. ....... .......+.+|+.+||+.||++|||++|+++.
T Consensus 260 -~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 260 -VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp -HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111000 000000 0000000 00013467899999999999999999999874
No 228
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.4e-35 Score=334.36 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=192.4
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCC------CcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDED------NQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~------~~~~lV 639 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ..+.+|+++|++++||||+++++++... ...++|
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 345689999999999999985 4889999987543 2235799999999999999999988432 236789
Q ss_pred eeeccCCChhhhhccc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC-CcEEEeecCCcccc
Q 002809 640 YEFMANGNLQEYLSDI--SKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK-LQAKLADFGLSKSF 716 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~-~~~kL~DFGla~~~ 716 (878)
|||+++ +|.+.+... ....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.+
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999975 666665432 256799999999999999999999998 99999999999999965 57899999999876
Q ss_pred ccCCCCcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHH-------Hh
Q 002809 717 ATDANTHVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSL-------IA 788 (878)
Q Consensus 717 ~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~-------~~ 788 (878)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|++||......+. +.+.+... +.
T Consensus 208 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~--l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 208 VRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ--LVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHHHH
T ss_pred ccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHH
Confidence 43321 2235689999999998764 799999999999999999999999988665332 22222110 00
Q ss_pred --cCCcccccCCccc-----cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 789 --KGDIKSIVDPRLQ-----EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 789 --~~~~~~iid~~l~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.....+..-+.+. ..+......++.+|+.+||+.||++||++.|+++.
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0111111111111 11122234578899999999999999999999863
No 229
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.3e-34 Score=322.62 Aligned_cols=200 Identities=27% Similarity=0.356 Sum_probs=170.5
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhc-cc-----ceeeeeecccCCCcceeE
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH-HR-----NLTSLVGHCDEDNQTALI 639 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~-H~-----nIv~l~g~~~~~~~~~lV 639 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... .....++..|+.++..++ |+ +|+++.+++...+..++|
T Consensus 56 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 134 (382)
T 2vx3_A 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLV 134 (382)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEE
T ss_pred EEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEE
Confidence 445689999999999999875 478999999754 334567888999998885 44 499999999999999999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEc--CCCcEEEeecCCccccc
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLN--EKLQAKLADFGLSKSFA 717 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~--~~~~~kL~DFGla~~~~ 717 (878)
|||++ |+|.+++.......+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||+++...
T Consensus 135 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~ 212 (382)
T 2vx3_A 135 FEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 212 (382)
T ss_dssp EECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence 99995 5999999876556799999999999999999999953 33899999999999995 47789999999998763
Q ss_pred cCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHH
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEE 775 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~ 775 (878)
.. .....||+.|+|||++.+..++.++|||||||++|||++|++||......+
T Consensus 213 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~ 265 (382)
T 2vx3_A 213 QR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 265 (382)
T ss_dssp CC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred cc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 22 223568999999999999999999999999999999999999998876543
No 230
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.6e-35 Score=328.45 Aligned_cols=248 Identities=23% Similarity=0.386 Sum_probs=194.5
Q ss_pred hhcccccccccEEEEEEEE--cceeEEEEEeccCC-hhhHHHHHHHHHH-HHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRL--NEIDVAVKMLSSSS-AQGFQQFQAEVKL-LMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~-~~~~~~f~~Ei~~-L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+|+. .++.||||++.... .....++..|+.+ +..++||||+++++++..++..++||||++
T Consensus 54 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (340)
T 3an0_A 54 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD 133 (340)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCS
T ss_pred eEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhh
Confidence 3457899999999999998 45889999997643 3344566666665 677899999999999999999999999997
Q ss_pred CCChhhhhccc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 645 NGNLQEYLSDI--SKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 645 ~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+ +|.+++... ....+++..++.++.||++||+|||+++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 134 ~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--- 207 (340)
T 3an0_A 134 T-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS--- 207 (340)
T ss_dssp E-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH---
T ss_pred C-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecccc---
Confidence 5 999988643 3567999999999999999999999732 8999999999999999999999999998765321
Q ss_pred cccccccCCCCccCccccc----cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCC
Q 002809 723 HVSTVVAGTPGYLDPEYYT----SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDP 798 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~ 798 (878)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||........ .+ ........ +
T Consensus 208 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~-~~----~~~~~~~~------~ 276 (340)
T 3an0_A 208 VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-QL----KQVVEEPS------P 276 (340)
T ss_dssp HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-HH----HHHHHSCC------C
T ss_pred cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH-HH----HHHhcCCC------C
Confidence 1223356999999999964 34789999999999999999999999986433211 11 11122111 1
Q ss_pred ccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 799 RLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 799 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+. ......++.+++.+||+.+|++||+++|+++.
T Consensus 277 ~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 277 QLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CCC---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCC---cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111 11123468899999999999999999999873
No 231
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.4e-34 Score=321.69 Aligned_cols=259 Identities=19% Similarity=0.269 Sum_probs=201.2
Q ss_pred HhhhcccccccccEEEEEEEEc--c-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccc------eeeeeecccCCCcce
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN--E-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRN------LTSLVGHCDEDNQTA 637 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~--~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~n------Iv~l~g~~~~~~~~~ 637 (878)
.+.+.+.||+|+||.||+++.. + ..||+|++... ....+.+.+|++++++++|++ ++.+.+++...+..+
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (355)
T 2eu9_A 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC 98 (355)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred cEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence 3456789999999999999874 3 67999999754 344577889999999998877 899999999999999
Q ss_pred eEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEE------------------
Q 002809 638 LIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILL------------------ 699 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl------------------ 699 (878)
+||||+ +++|.+++.......+++..++.++.||+.||+|||+. +|+||||||+|||+
T Consensus 99 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccccc
Confidence 999999 67888888765556799999999999999999999998 99999999999999
Q ss_pred -cCCCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHH
Q 002809 700 -NEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIH 778 (878)
Q Consensus 700 -~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~ 778 (878)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+...
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 249 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249 (355)
T ss_dssp EESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred ccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 67889999999999764322 223568999999999999999999999999999999999999998776543322
Q ss_pred HHHHHHH-----HHhcCCcccc-cCC-------------------ccc--cccCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002809 779 IRQWVNS-----LIAKGDIKSI-VDP-------------------RLQ--EDFDANSVWKAVELAMACLSPTGNQRPTMS 831 (878)
Q Consensus 779 l~~~v~~-----~~~~~~~~~i-id~-------------------~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~ 831 (878)
....... .......... ... .+. .........++.+++.+||+.||++|||++
T Consensus 250 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 329 (355)
T 2eu9_A 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA 329 (355)
T ss_dssp HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHH
Confidence 1111100 0000000000 000 000 011223455788999999999999999999
Q ss_pred HHHH
Q 002809 832 QVVM 835 (878)
Q Consensus 832 evl~ 835 (878)
|+++
T Consensus 330 e~l~ 333 (355)
T 2eu9_A 330 EALL 333 (355)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9985
No 232
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.9e-34 Score=323.44 Aligned_cols=259 Identities=23% Similarity=0.363 Sum_probs=197.1
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhc-----------ccceeeeeecccCCC
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH-----------HRNLTSLVGHCDEDN 634 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~-----------H~nIv~l~g~~~~~~ 634 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... ....+.+.+|++++.+++ |+||+++++++...+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~ 99 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG 99 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccC
Confidence 456789999999999999964 488999999754 334567889999999886 899999999987544
Q ss_pred ----cceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEc------CCCc
Q 002809 635 ----QTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLN------EKLQ 704 (878)
Q Consensus 635 ----~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~------~~~~ 704 (878)
..++||||+ +++|.+++.......+++..++.++.||+.||+|||+++ +|+||||||+|||++ ..+.
T Consensus 100 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 100 PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEE
T ss_pred CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcce
Confidence 789999999 899999998766667999999999999999999999853 899999999999994 4458
Q ss_pred EEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHH----HHHHH
Q 002809 705 AKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEE----KIHIR 780 (878)
Q Consensus 705 ~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~----~~~l~ 780 (878)
+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+.
T Consensus 177 ~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 251 (373)
T 1q8y_A 177 IKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251 (373)
T ss_dssp EEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred EEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence 999999999866432 223468999999999999999999999999999999999999998654211 11111
Q ss_pred HHHHHH-------HhcCC-----------cccccCCcc---------ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002809 781 QWVNSL-------IAKGD-----------IKSIVDPRL---------QEDFDANSVWKAVELAMACLSPTGNQRPTMSQV 833 (878)
Q Consensus 781 ~~v~~~-------~~~~~-----------~~~iid~~l---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~ev 833 (878)
+..... ...+. ...+..... ...++.....++.+++.+||+.||++|||++|+
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 331 (373)
T 1q8y_A 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331 (373)
T ss_dssp HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence 111100 00000 000000000 012345667789999999999999999999999
Q ss_pred HH
Q 002809 834 VM 835 (878)
Q Consensus 834 l~ 835 (878)
++
T Consensus 332 l~ 333 (373)
T 1q8y_A 332 VN 333 (373)
T ss_dssp HT
T ss_pred hh
Confidence 87
No 233
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=321.68 Aligned_cols=251 Identities=23% Similarity=0.314 Sum_probs=193.5
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCc------cee
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQ------TAL 638 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~------~~l 638 (878)
.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|+.++++++||||+++++++..... .++
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l 106 (353)
T 3coi_A 27 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL 106 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEE
T ss_pred EEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEE
Confidence 45678999999999999875 489999999754 33445788999999999999999999999977654 499
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccccc
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~ 718 (878)
||||++ |+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 107 v~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 107 VMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp EEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred Eecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 999997 688888743 489999999999999999999998 999999999999999999999999999976532
Q ss_pred CCCCcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcC-------
Q 002809 719 DANTHVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKG------- 790 (878)
Q Consensus 719 ~~~~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~------- 790 (878)
. .....||+.|+|||++.+ ..++.++|||||||+++||++|+.||......+... .... .....
T Consensus 179 ~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--~i~~-~~~~~~~~~~~~ 250 (353)
T 3coi_A 179 E-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT--QILK-VTGVPGTEFVQK 250 (353)
T ss_dssp ----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHH--HHHH-HHCBCCHHHHTT
T ss_pred C-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHH-HhCCCCHHHHHH
Confidence 2 223468999999999877 678999999999999999999999998766433211 1111 00000
Q ss_pred -----------CcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 791 -----------DIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 791 -----------~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.+.....+.+. .........+.+++.+||+.||++||+++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000010 1112334578899999999999999999999864
No 234
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7.1e-35 Score=316.36 Aligned_cols=249 Identities=24% Similarity=0.387 Sum_probs=189.7
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccC-------------
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDE------------- 632 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~------------- 632 (878)
+.+.+.||+|+||.||+|+.. ++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (303)
T 1zy4_A 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKK 86 (303)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------C
T ss_pred chhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccccc
Confidence 455689999999999999974 488999998653 3445789999999999999999999998754
Q ss_pred CCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCC
Q 002809 633 DNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGL 712 (878)
Q Consensus 633 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGl 712 (878)
....++||||+++|+|.+++.. ....+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 87 KSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred CCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence 4567899999999999999975 245688899999999999999999998 999999999999999999999999999
Q ss_pred ccccccCCC------------CcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 002809 713 SKSFATDAN------------THVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHI 779 (878)
Q Consensus 713 a~~~~~~~~------------~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l 779 (878)
++....... ........|+..|+|||.+.+. .++.++|||||||++|||++ ||.... ....+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--~~~~~ 237 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--ERVNI 237 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHHH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--hHHHH
Confidence 986532210 1122345689999999999864 68999999999999999998 443211 11111
Q ss_pred HHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 780 RQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 780 ~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
... +.... ..+....+......+.+++.+||+.||++||+++|+++.
T Consensus 238 ---~~~-~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 238 ---LKK-LRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp ---HHH-HHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---HHh-ccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111 11111 112222333444567899999999999999999999873
No 235
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.5e-34 Score=325.14 Aligned_cols=251 Identities=24% Similarity=0.316 Sum_probs=193.3
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCcc------ee
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQT------AL 638 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~------~l 638 (878)
.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|+.++++++||||+++++++...+.. ++
T Consensus 45 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l 124 (371)
T 4exu_A 45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL 124 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEE
T ss_pred EEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEE
Confidence 45678999999999999875 489999999764 334467889999999999999999999999877655 99
Q ss_pred EeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCcccccc
Q 002809 639 IYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFAT 718 (878)
Q Consensus 639 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~ 718 (878)
||||+. ++|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 125 v~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 125 VMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred EEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 999997 68888774 3499999999999999999999998 999999999999999999999999999976532
Q ss_pred CCCCcccccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccccc-
Q 002809 719 DANTHVSTVVAGTPGYLDPEYYTS-NRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIV- 796 (878)
Q Consensus 719 ~~~~~~~~~~~gt~~Y~APE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ii- 796 (878)
. .....||+.|+|||++.+ ..++.++|||||||+++||++|+.||......+... .... ..... ..+..
T Consensus 197 ~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~i~~-~~~~~-~~~~~~ 267 (371)
T 4exu_A 197 E-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT--QILK-VTGVP-GTEFVQ 267 (371)
T ss_dssp --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHH-HHCCC-CHHHHT
T ss_pred C-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHHH-HhCCC-cHHHHH
Confidence 2 223568999999999987 688999999999999999999999998766433211 1111 00000 00000
Q ss_pred --------------CCcccc---ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 797 --------------DPRLQE---DFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 797 --------------d~~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
...... .........+.+++.+||+.+|++|||++|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000 0011224578899999999999999999999874
No 236
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2e-34 Score=311.72 Aligned_cols=251 Identities=28% Similarity=0.395 Sum_probs=201.5
Q ss_pred HHHHhhhcccccccccEEEEEEEEc--ceeEEEEEeccCC--hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeE
Q 002809 564 VKITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS--AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALI 639 (878)
Q Consensus 564 ~~~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV 639 (878)
....+.+.+.||+|+||.||+++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3445667789999999999999985 4889999986542 33467899999999999999999999999999999999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC---CcEEEeecCCcccc
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK---LQAKLADFGLSKSF 716 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~---~~~kL~DFGla~~~ 716 (878)
+||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++...
T Consensus 100 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 100 GELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 999999999998875 45699999999999999999999998 99999999999999764 47999999998866
Q ss_pred ccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccccc
Q 002809 717 ATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIV 796 (878)
Q Consensus 717 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ii 796 (878)
..... .....|+..|+|||.+.+ .++.++||||||++++||++|+.||......+.. ..+..+....
T Consensus 175 ~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-------~~~~~~~~~~-- 241 (287)
T 2wei_A 175 QQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL-------KRVETGKYAF-- 241 (287)
T ss_dssp CCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHCCCCC--
T ss_pred cCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHcCCCCC--
Confidence 43221 122357889999999876 4899999999999999999999999876543311 1122222110
Q ss_pred CCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 797 DPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 797 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+.... ......+.+++.+||+.+|++||+++|+++.
T Consensus 242 ~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 242 DLPQW----RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CSGGG----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred Cchhh----hhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 00000 1123467899999999999999999999873
No 237
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.9e-34 Score=320.57 Aligned_cols=258 Identities=21% Similarity=0.282 Sum_probs=183.7
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeecccCCCc-------ceeE
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQ-------TALI 639 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~-------~~lV 639 (878)
.+.+.||+|+||.||+|+.. +..||||++.... .....+.+|++.+..++||||+++++++...+. .++|
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv 104 (360)
T 3e3p_A 26 QVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVV 104 (360)
T ss_dssp EEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEE
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEE
Confidence 44689999999999999985 4889999986543 223567788899999999999999999854333 7899
Q ss_pred eeeccCCChhhhhcc--ccCCCCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEecCCCCccEEEcC-CCcEEEeecCCcc
Q 002809 640 YEFMANGNLQEYLSD--ISKKVLSSQERLRIAVESAQGLEYLH--NGCKPPIVHRDVKSTNILLNE-KLQAKLADFGLSK 714 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH--~~~~~~ivHrDLKp~NILl~~-~~~~kL~DFGla~ 714 (878)
|||+++ +|.+.+.. .....+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+||+|||+++
T Consensus 105 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~ 180 (360)
T 3e3p_A 105 MEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180 (360)
T ss_dssp EECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred eecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence 999976 55544432 13567899999999999999999999 66 9999999999999997 8999999999998
Q ss_pred ccccCCCCcccccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHH-------
Q 002809 715 SFATDANTHVSTVVAGTPGYLDPEYYTSN-RLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSL------- 786 (878)
Q Consensus 715 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~------- 786 (878)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......... ...+...
T Consensus 181 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~ 255 (360)
T 3e3p_A 181 KLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL--HEIVRVLGCPSREV 255 (360)
T ss_dssp CCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHH
T ss_pred ecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH--HHHHHHcCCCCHHH
Confidence 764332 22335689999999998655 4899999999999999999999999887654322 1211110
Q ss_pred ----HhcCCcccccCCc------cccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 787 ----IAKGDIKSIVDPR------LQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 787 ----~~~~~~~~iid~~------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
..........+.. ...........++.+++.+||+.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000000000000 0011122245678999999999999999999999864
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.6e-34 Score=320.55 Aligned_cols=245 Identities=21% Similarity=0.292 Sum_probs=168.6
Q ss_pred cccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHH-HHHHHhcccceeeeeecccC----CCcceeEeeec
Q 002809 571 ERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEV-KLLMRVHHRNLTSLVGHCDE----DNQTALIYEFM 643 (878)
Q Consensus 571 ~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei-~~L~~l~H~nIv~l~g~~~~----~~~~~lV~Ey~ 643 (878)
.+.||+|+||.||+++.. ++.||||++.... ...+|+ ..+..++||||+++++++.. +...++||||+
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 108 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECM 108 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEecc
Confidence 357999999999999986 5899999987542 222333 34566789999999999865 45589999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC---CCcEEEeecCCccccccCC
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE---KLQAKLADFGLSKSFATDA 720 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~---~~~~kL~DFGla~~~~~~~ 720 (878)
++|+|.+++.......+++..++.++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 109 ~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~- 184 (336)
T 3fhr_A 109 EGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN- 184 (336)
T ss_dssp TTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecccc-
Confidence 999999999876566899999999999999999999998 9999999999999986 455999999999765322
Q ss_pred CCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc
Q 002809 721 NTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL 800 (878)
Q Consensus 721 ~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l 800 (878)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+..+.. .+
T Consensus 185 ---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~------~~ 252 (336)
T 3fhr_A 185 ---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP---GMKRRIRLGQY------GF 252 (336)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------------CC
T ss_pred ---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh---hHHHhhhcccc------cc
Confidence 1233568999999999988889999999999999999999999997654322100 00011111100 01
Q ss_pred ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 801 QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 801 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
...........+.+++.+||+.+|++||+++|+++.
T Consensus 253 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 253 PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111112234468899999999999999999999984
No 239
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=317.14 Aligned_cols=241 Identities=25% Similarity=0.450 Sum_probs=190.0
Q ss_pred HHHHhhhcccccccccEEEEEEEEc--ceeEEEEEeccCChh------hHHHHHHHHHHHHHh----cccceeeeeeccc
Q 002809 564 VKITNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQ------GFQQFQAEVKLLMRV----HHRNLTSLVGHCD 631 (878)
Q Consensus 564 ~~~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~------~~~~f~~Ei~~L~~l----~H~nIv~l~g~~~ 631 (878)
....+.+.+.||+|+||.||+|+.. ++.||||++...... ....+.+|+.++.++ +|+||+++++++.
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 3444667789999999999999874 478999999754321 234567899999999 8999999999999
Q ss_pred CCCcceeEeee-ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEc-CCCcEEEee
Q 002809 632 EDNQTALIYEF-MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLN-EKLQAKLAD 709 (878)
Q Consensus 632 ~~~~~~lV~Ey-~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~-~~~~~kL~D 709 (878)
..+..++|+|+ +.+++|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred cCCeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEE
Confidence 99999999999 789999999976 45699999999999999999999998 999999999999999 889999999
Q ss_pred cCCccccccCCCCcccccccCCCCccCccccccCCCC-CccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHh
Q 002809 710 FGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLT-EKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIA 788 (878)
Q Consensus 710 FGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t-~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~ 788 (878)
||+++...... .....|+..|+|||++.+..+. .++||||||++++||++|+.||..... + .
T Consensus 184 fg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~-------~- 246 (312)
T 2iwi_A 184 FGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----I-------L- 246 (312)
T ss_dssp CSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H-------H-
T ss_pred cchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----H-------h-
Confidence 99998764322 2335689999999999876664 589999999999999999999965211 0 0
Q ss_pred cCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 789 KGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 789 ~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.... . ++......+.+++.+||+.+|++||+++|+++.
T Consensus 247 ~~~~------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 247 EAEL------H----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HTCC------C----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred hhcc------C----CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0110 1 111223467899999999999999999999873
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.3e-34 Score=317.29 Aligned_cols=251 Identities=20% Similarity=0.328 Sum_probs=176.3
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCC-hhhHHHHHHHHH-HHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS-AQGFQQFQAEVK-LLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ei~-~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+++.. ++.||||++.... .....++..|+. +++.++||||+++++++...+..++||||++
T Consensus 25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~ 104 (327)
T 3aln_A 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS 104 (327)
T ss_dssp EC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred hehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC
Confidence 34578999999999999986 5889999997653 334456666766 6677899999999999999999999999997
Q ss_pred CCChhhhhcc---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCC
Q 002809 645 NGNLQEYLSD---ISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 645 ~gsL~~~l~~---~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~ 721 (878)
+ +|.+++.. .....+++..+..++.|+++||.|||+. .+|+||||||+|||++.++.+||+|||+++......
T Consensus 105 ~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~- 180 (327)
T 3aln_A 105 T-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI- 180 (327)
T ss_dssp E-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred C-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc-
Confidence 5 88877753 2256799999999999999999999984 279999999999999999999999999998664321
Q ss_pred CcccccccCCCCccCcccc----ccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccC
Q 002809 722 THVSTVVAGTPGYLDPEYY----TSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVD 797 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~----~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid 797 (878)
......|+..|+|||++ .+..++.++|||||||++|||++|+.||........ ... .+.....
T Consensus 181 --~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~------~~~~~~~ 247 (327)
T 3aln_A 181 --AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLT------QVVKGDP 247 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------C------CCCCSCC
T ss_pred --ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHH------HHhcCCC
Confidence 12234689999999998 456789999999999999999999999976432110 000 0000011
Q ss_pred CccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 798 PRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 798 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+.+...........+.+++.+||+.+|++||+++|+++.
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 111111112234578899999999999999999999874
No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.2e-34 Score=328.36 Aligned_cols=246 Identities=26% Similarity=0.368 Sum_probs=184.1
Q ss_pred cccccccccEEEEE-EEEcceeEEEEEeccCChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEeeeccCCCh
Q 002809 571 ERTLGKGGFGTVYY-GRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYEFMANGNL 648 (878)
Q Consensus 571 ~~~LG~G~fG~Vy~-~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 648 (878)
.+.||+|+||+||. +...++.||||++.... .+.+.+|++++.++ +||||+++++++..++..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 47899999999964 45567999999986532 35678999999987 89999999999999999999999995 699
Q ss_pred hhhhccccCC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCC-------------CcEEEeec
Q 002809 649 QEYLSDISKK-----VLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEK-------------LQAKLADF 710 (878)
Q Consensus 649 ~~~l~~~~~~-----~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~-------------~~~kL~DF 710 (878)
.+++...... ..++..++.++.||+.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9999764321 113335678999999999999998 99999999999999754 48999999
Q ss_pred CCccccccCCCCc--ccccccCCCCccCcccccc-------CCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 002809 711 GLSKSFATDANTH--VSTVVAGTPGYLDPEYYTS-------NRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIR 780 (878)
Q Consensus 711 Gla~~~~~~~~~~--~~~~~~gt~~Y~APE~~~~-------~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~ 780 (878)
|+++.+....... ......||+.|+|||++.+ ..++.++|||||||+++||+| |+.||........ .+
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~-~i- 250 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NI- 250 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH-HH-
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH-HH-
Confidence 9998764332211 1234579999999999975 578999999999999999999 9999976543221 11
Q ss_pred HHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 781 QWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 781 ~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.. +... .+.+....+.....++.+++.+||+.+|++||++.||++
T Consensus 251 --~~-----~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 251 --IR-----GIFS---LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HH-----TCCC---CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --hc-----CCCC---cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 1110 011111123445678899999999999999999999986
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.1e-34 Score=319.37 Aligned_cols=237 Identities=24% Similarity=0.406 Sum_probs=194.3
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCChh------hHHHHHHHHHHHHHhc--ccceeeeeecccCCCcce
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQ------GFQQFQAEVKLLMRVH--HRNLTSLVGHCDEDNQTA 637 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~------~~~~f~~Ei~~L~~l~--H~nIv~l~g~~~~~~~~~ 637 (878)
+.+.+.||+|+||.||+|+.. ++.||||++...... ..+.+.+|+.++.+++ |+||+++++++...+..+
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~ 124 (320)
T 3a99_A 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV 124 (320)
T ss_dssp EEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEE
Confidence 456789999999999999874 488999998754321 2356788999999996 599999999999999999
Q ss_pred eEeeeccC-CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEc-CCCcEEEeecCCccc
Q 002809 638 LIYEFMAN-GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLN-EKLQAKLADFGLSKS 715 (878)
Q Consensus 638 lV~Ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~-~~~~~kL~DFGla~~ 715 (878)
+|+|++.+ ++|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||+++.
T Consensus 125 lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 125 LILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp EEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 99999986 899999976 45799999999999999999999998 999999999999999 788999999999987
Q ss_pred cccCCCCcccccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCccc
Q 002809 716 FATDANTHVSTVVAGTPGYLDPEYYTSNRL-TEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKS 794 (878)
Q Consensus 716 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ 794 (878)
.... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... + . .+..
T Consensus 200 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~-------~-~~~~-- 260 (320)
T 3a99_A 200 LKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----I-------I-RGQV-- 260 (320)
T ss_dssp CCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H-------H-HCCC--
T ss_pred cccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----h-------h-cccc--
Confidence 6432 1223568999999999987665 6789999999999999999999965211 0 0 1111
Q ss_pred ccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 795 IVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 795 iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
.. .. ....++.+++.+||+.+|++||+++|+++.
T Consensus 261 ~~----~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 261 FF----RQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CC----SS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc----cc----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01 11 122467899999999999999999999873
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=306.80 Aligned_cols=247 Identities=21% Similarity=0.302 Sum_probs=175.5
Q ss_pred hhcccccccccEEEEEEEEc--ceeEEEEEeccCCh-hhH-HHHHHHHHHHHHhcccceeeeeecccCCCcceeEeeecc
Q 002809 569 NFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA-QGF-QQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEFMA 644 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~-~~~-~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 644 (878)
.+.+.||+|+||.||+++.. ++.||||++..... ... +.+.++..+++.++||||+++++++...+..++||||+
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 106 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM- 106 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-
Confidence 44578999999999999985 58899999976532 222 33445555778889999999999999999999999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCc
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHN-GCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTH 723 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 723 (878)
++.+..+.. .....+++..+..++.|+++||+|||+ . +|+||||||+|||++.++.+||+|||++.......
T Consensus 107 ~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--- 179 (318)
T 2dyl_A 107 GTCAEKLKK-RMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--- 179 (318)
T ss_dssp SEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred CCcHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc---
Confidence 444444443 335679999999999999999999997 4 89999999999999999999999999997653322
Q ss_pred ccccccCCCCccCccccc-----cCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCC
Q 002809 724 VSTVVAGTPGYLDPEYYT-----SNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDP 798 (878)
Q Consensus 724 ~~~~~~gt~~Y~APE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~ 798 (878)
......|++.|+|||++. ...++.++|||||||++|||++|+.||........ . ......... ..
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~----~~~~~~~~~-~~---- 249 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-V----LTKVLQEEP-PL---- 249 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-H----HHHHHHSCC-CC----
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH-H----HHHHhccCC-CC----
Confidence 122346899999999984 45688999999999999999999999986433211 1 111122111 11
Q ss_pred ccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 799 RLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 799 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
+.. .......+.+++.+||+.+|.+||+++|+++.
T Consensus 250 -~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 250 -LPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp -CCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -CCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 110 01122467899999999999999999999874
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.3e-34 Score=325.10 Aligned_cols=245 Identities=27% Similarity=0.378 Sum_probs=184.5
Q ss_pred hhcccccccccEE-EEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeEeeeccCC
Q 002809 569 NFERTLGKGGFGT-VYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALIYEFMANG 646 (878)
Q Consensus 569 ~f~~~LG~G~fG~-Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 646 (878)
...+.||+|+||+ ||++..+++.||||++..... ..+.+|+++|+++ +||||+++++++......++||||+. |
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 4457899999998 566677779999999975432 3467899999999 79999999999999999999999996 6
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC-----CCcEEEeecCCccccccCCC
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE-----KLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~-----~~~~kL~DFGla~~~~~~~~ 721 (878)
+|.+++.... ..+.+..++.++.||++||+|||+. +|+||||||+|||++. ...+||+|||+++.......
T Consensus 103 ~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 103 TLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp EHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred CHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 9999997533 3344556789999999999999998 9999999999999953 34688999999987643321
Q ss_pred C-cccccccCCCCccCccccc---cCCCCCccchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHHHHhcCCccccc
Q 002809 722 T-HVSTVVAGTPGYLDPEYYT---SNRLTEKSDVYSFGVVILEIIT-CKPAISRINEEEKIHIRQWVNSLIAKGDIKSIV 796 (878)
Q Consensus 722 ~-~~~~~~~gt~~Y~APE~~~---~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~ii 796 (878)
. .......||+.|+|||++. ...++.++|||||||+++||++ |+.||......... ........ ...
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-------~~~~~~~~-~~~ 250 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-------ILLGACSL-DCL 250 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-------HHTTCCCC-TTS
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-------HHhccCCc-ccc
Confidence 1 2233467999999999997 4567889999999999999999 89998654432211 11111111 111
Q ss_pred CCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 797 DPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 797 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
.........+.+++.+||+.+|++||+++||++
T Consensus 251 ------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 251 ------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111233456789999999999999999999995
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-33 Score=333.76 Aligned_cols=266 Identities=25% Similarity=0.335 Sum_probs=204.7
Q ss_pred HhhhcccccccccEEEEEEEEc--ceeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccC------CCcce
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDE------DNQTA 637 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~------~~~~~ 637 (878)
.+.+.+.||+|+||.||+|+.. +..||||++... .....+.+.+|++++.+++||||+++++++.. ++..+
T Consensus 15 rY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~ 94 (676)
T 3qa8_A 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 94 (676)
T ss_dssp --CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCC
T ss_pred CeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEE
Confidence 3566789999999999999874 488999998764 44556789999999999999999999998765 67789
Q ss_pred eEeeeccCCChhhhhcccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCc---EEEeecCCc
Q 002809 638 LIYEFMANGNLQEYLSDIS-KKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQ---AKLADFGLS 713 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~---~kL~DFGla 713 (878)
+||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 95 LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 9999999999999997643 33689999999999999999999998 9999999999999997764 999999999
Q ss_pred cccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCc-
Q 002809 714 KSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDI- 792 (878)
Q Consensus 714 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~- 792 (878)
....... ......|+..|+|||.+.+..++.++|||||||++|||++|+.||....... .|..........
T Consensus 172 ~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~-----~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 172 KELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV-----QWHGKVREKSNEH 243 (676)
T ss_dssp CBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH-----HSSTTCC------
T ss_pred ccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh-----hhhhhhhcccchh
Confidence 8764332 2234579999999999999999999999999999999999999997653321 221111111100
Q ss_pred ---ccccC------Ccc--ccccCHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHHHHHHH
Q 002809 793 ---KSIVD------PRL--QEDFDANSVWKAVELAMACLSPTGNQRPTMSQ-----VVMELSECLAA 843 (878)
Q Consensus 793 ---~~iid------~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~e-----vl~~L~~~~~~ 843 (878)
.+... ..+ ...........+.+++..||..||++||+++| ..+.+++++..
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 00000 010 11233456678999999999999999999988 55667776643
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.9e-33 Score=337.42 Aligned_cols=240 Identities=23% Similarity=0.324 Sum_probs=192.5
Q ss_pred HhhhcccccccccEEEEEEEEc---ceeEEEEEeccC-ChhhHHHHHHHHHHHHHhcccceeeeeecccCCCc-----ce
Q 002809 567 TNNFERTLGKGGFGTVYYGRLN---EIDVAVKMLSSS-SAQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQ-----TA 637 (878)
Q Consensus 567 t~~f~~~LG~G~fG~Vy~~~~~---~~~vAvK~l~~~-~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~-----~~ 637 (878)
.+.+.+.||+|+||.||+++.. ++.||||++... .......+.+|++++.+++||||+++++++...+. .+
T Consensus 81 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~ 160 (681)
T 2pzi_A 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGY 160 (681)
T ss_dssp TEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred ceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeE
Confidence 3456789999999999999874 488999998754 34456788999999999999999999999987665 69
Q ss_pred eEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccc
Q 002809 638 LIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFA 717 (878)
Q Consensus 638 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 717 (878)
+||||+++++|.+++.. .+++.+++.++.||++||.|||++ +|+||||||+|||++.+ .+||+|||+++...
T Consensus 161 lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 161 IVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999999999988753 699999999999999999999998 99999999999999986 89999999998763
Q ss_pred cCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccC
Q 002809 718 TDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVD 797 (878)
Q Consensus 718 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid 797 (878)
.. ....||+.|+|||++.+.. +.++|||||||+++||++|.+|+...... .+.
T Consensus 233 ~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------------~~~---- 285 (681)
T 2pzi_A 233 SF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD----------------GLP---- 285 (681)
T ss_dssp CC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS----------------SCC----
T ss_pred cC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc----------------ccc----
Confidence 32 3356999999999987654 88999999999999999999887642110 000
Q ss_pred CccccccCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHHHH
Q 002809 798 PRLQEDFDANSVWKAVELAMACLSPTGNQRP-TMSQVVMELSECLAAE 844 (878)
Q Consensus 798 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-sm~evl~~L~~~~~~e 844 (878)
...........+.+++.+||+.+|++|| +++++.+.|..++...
T Consensus 286 ---~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 286 ---EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp ---TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred ---ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0000112234678999999999999999 5667777787766543
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.98 E-value=1e-32 Score=314.72 Aligned_cols=235 Identities=17% Similarity=0.140 Sum_probs=177.3
Q ss_pred hcccccccccEEEEEEEEc--ceeEEEEEeccCCh---hhHHHHHHHHHHHHHhcc-cceeeeeec--------------
Q 002809 570 FERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSA---QGFQQFQAEVKLLMRVHH-RNLTSLVGH-------------- 629 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ei~~L~~l~H-~nIv~l~g~-------------- 629 (878)
..+.||+|+||.||+|+.. ++.||||++..... ...+.|.+|+.++..++| +|......+
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 3578999999999999976 58999999884322 236789999999999976 322111111
Q ss_pred -------ccC-----CCcceeEeeeccCCChhhhhcc-----ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC
Q 002809 630 -------CDE-----DNQTALIYEFMANGNLQEYLSD-----ISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDV 692 (878)
Q Consensus 630 -------~~~-----~~~~~lV~Ey~~~gsL~~~l~~-----~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDL 692 (878)
+.. ....+++|+++ +++|.++++. .....+++..++.++.|+++||+|||++ +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 111 12345566654 7899998852 2245688999999999999999999998 9999999
Q ss_pred CCccEEEcCCCcEEEeecCCccccccCCCCcccccccCCCCccCcccc----------ccCCCCCccchhhHHHHHHHHH
Q 002809 693 KSTNILLNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYY----------TSNRLTEKSDVYSFGVVILEII 762 (878)
Q Consensus 693 Kp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~----------~~~~~t~ksDV~S~Gvvl~ell 762 (878)
||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|||+
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999998765322 234567 999999999 5556888999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002809 763 TCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVM 835 (878)
Q Consensus 763 tG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~ 835 (878)
+|+.||....... ....++... ... ...+.+++.+||+.+|++||++.|+++
T Consensus 312 tg~~Pf~~~~~~~---------------~~~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 312 CADLPNTDDAALG---------------GSEWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HSSCCCCTTGGGS---------------CSGGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HCCCCCCCcchhh---------------hHHHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999997654321 111111100 111 246889999999999999999998865
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.98 E-value=2.4e-32 Score=297.52 Aligned_cols=222 Identities=22% Similarity=0.286 Sum_probs=175.2
Q ss_pred ccccccccEEEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHH-HHhcccceeeeeecccC----CCcceeEeeecc
Q 002809 572 RTLGKGGFGTVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLL-MRVHHRNLTSLVGHCDE----DNQTALIYEFMA 644 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L-~~l~H~nIv~l~g~~~~----~~~~~lV~Ey~~ 644 (878)
+.||+|+||.||+++.. ++.||+|++... ..+.+|++++ +..+||||+++++++.. +...++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 67999999999999874 488999999653 4677899888 55589999999999876 677899999999
Q ss_pred CCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcC---CCcEEEeecCCccccccCCC
Q 002809 645 NGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNE---KLQAKLADFGLSKSFATDAN 721 (878)
Q Consensus 645 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~---~~~~kL~DFGla~~~~~~~~ 721 (878)
+|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||++....
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---- 171 (299)
T 3m2w_A 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---- 171 (299)
T ss_dssp SCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc----
Confidence 99999999876566799999999999999999999998 9999999999999998 7899999999986432
Q ss_pred CcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCcc-
Q 002809 722 THVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRL- 800 (878)
Q Consensus 722 ~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l- 800 (878)
+..++.++|||||||++|||++|+.||........ .......+.....
T Consensus 172 --------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~~~~~~~~~~~~ 220 (299)
T 3m2w_A 172 --------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMKTRIRMGQYE 220 (299)
T ss_dssp --------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSCTTCCS
T ss_pred --------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHHHHHHHhhcccc
Confidence 23467899999999999999999999976443210 0000111111111
Q ss_pred -ccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002809 801 -QEDFDANSVWKAVELAMACLSPTGNQRPTMSQVVME 836 (878)
Q Consensus 801 -~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~ 836 (878)
..........++.+++.+||+.+|++||+++|+++.
T Consensus 221 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 221 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000001234578899999999999999999999874
No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.98 E-value=2.2e-32 Score=296.45 Aligned_cols=227 Identities=11% Similarity=0.115 Sum_probs=181.8
Q ss_pred hhhcccccccccEEEEEEEEc--ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 568 NNFERTLGKGGFGTVYYGRLN--EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 568 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
+.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|+.++.+++||||+++++++..++..++||||
T Consensus 33 y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 112 (286)
T 3uqc_A 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEW 112 (286)
T ss_dssp EEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEe
Confidence 456789999999999999986 5899999997653 33457899999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++++|.++++. . ....++.+++.|+++||+|||++ +|+||||||+|||++.++.+||+++|
T Consensus 113 ~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 113 IRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp CCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred cCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 999999999964 2 35567899999999999999998 99999999999999999999998543
Q ss_pred cccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccc-
Q 002809 723 HVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQ- 801 (878)
Q Consensus 723 ~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~- 801 (878)
|++ .++.++|||||||++|||+||+.||.......... .....+.....
T Consensus 175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~------------~~~~~~~~~~~~ 224 (286)
T 3uqc_A 175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA------------PAERDTAGQPIE 224 (286)
T ss_dssp -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE------------ECCBCTTSCBCC
T ss_pred -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH------------HHHHHhccCCCC
Confidence 233 36789999999999999999999998754321000 00000011000
Q ss_pred -cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 002809 802 -EDFDANSVWKAVELAMACLSPTGNQRPTMSQVVMELSECLAA 843 (878)
Q Consensus 802 -~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~evl~~L~~~~~~ 843 (878)
..........+.+++.+||+.||++| |++|+++.|+++...
T Consensus 225 ~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 225 PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 01112334568899999999999999 999999999997644
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=9.6e-33 Score=305.80 Aligned_cols=241 Identities=17% Similarity=0.191 Sum_probs=184.0
Q ss_pred HHhhhcccccccccEEEEEEEEcceeEEEEEeccCC--------hhhHHHHHHHHHHHHHhc------------------
Q 002809 566 ITNNFERTLGKGGFGTVYYGRLNEIDVAVKMLSSSS--------AQGFQQFQAEVKLLMRVH------------------ 619 (878)
Q Consensus 566 ~t~~f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~--------~~~~~~f~~Ei~~L~~l~------------------ 619 (878)
..+.+.+.||+|+||.||+|+.+++.||||++.... ....+.+.+|+.++++++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~ 99 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNS 99 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEE
T ss_pred ccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcc
Confidence 345667899999999999999988999999997642 223478999999999997
Q ss_pred --------ccceeeeeecccC-------------CCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHH
Q 002809 620 --------HRNLTSLVGHCDE-------------DNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEY 678 (878)
Q Consensus 620 --------H~nIv~l~g~~~~-------------~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~y 678 (878)
||||+++++++.. .+..++||||+++|++.+.+.+ ..+++..++.++.||+.||+|
T Consensus 100 ~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 100 VHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHH
T ss_pred eeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHH
Confidence 5666666666654 7889999999999987777643 568999999999999999999
Q ss_pred HH-hCCCCCeEecCCCCccEEEcCCC--------------------cEEEeecCCccccccCCCCcccccccCCCCccCc
Q 002809 679 LH-NGCKPPIVHRDVKSTNILLNEKL--------------------QAKLADFGLSKSFATDANTHVSTVVAGTPGYLDP 737 (878)
Q Consensus 679 LH-~~~~~~ivHrDLKp~NILl~~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~AP 737 (878)
|| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|+||
T Consensus 177 lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aP 246 (336)
T 2vuw_A 177 AEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDE 246 (336)
T ss_dssp HHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCS
T ss_pred HHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccCh
Confidence 99 88 999999999999999887 8999999999876422 34699999999
Q ss_pred cccccCCCCCccchhhHHHH-HHHHHhCCCCCCCCChHHHHHHHHHHHHHHhcCCcccccCCccccccCHHHHHHHHHHH
Q 002809 738 EYYTSNRLTEKSDVYSFGVV-ILEIITCKPAISRINEEEKIHIRQWVNSLIAKGDIKSIVDPRLQEDFDANSVWKAVELA 816 (878)
Q Consensus 738 E~~~~~~~t~ksDV~S~Gvv-l~elltG~~p~~~~~~~~~~~l~~~v~~~~~~~~~~~iid~~l~~~~~~~~~~~l~~l~ 816 (878)
|++.+.. +.++||||+|++ .+++++|..||.... .+............. ..............++.+++
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~-----~~~~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL-----WLHYLTDKMLKQMTF----KTKCNTPAMKQIKRKIQEFH 316 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH-----HHHHHHHHHHHTCCC----SSCCCSHHHHHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchh-----hhhHHHHhhhhhhcc----CcccchhhhhhcCHHHHHHH
Confidence 9998766 889999998777 777888999874210 000011111111111 11111112234567899999
Q ss_pred HHccCCCCCCCCCHHHHH
Q 002809 817 MACLSPTGNQRPTMSQVV 834 (878)
Q Consensus 817 ~~Cl~~dP~~RPsm~evl 834 (878)
.+||+.+ |++|++
T Consensus 317 ~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 317 RTMLNFS-----SATDLL 329 (336)
T ss_dssp HHGGGSS-----SHHHHH
T ss_pred HHHhccC-----CHHHHH
Confidence 9999975 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=7.4e-27 Score=276.32 Aligned_cols=182 Identities=16% Similarity=0.133 Sum_probs=129.6
Q ss_pred cccccccEEEEEEEE--cceeEEEEEeccC----------ChhhHHHHHHHHHHHHHh-cccceeeeeecccCCCcceeE
Q 002809 573 TLGKGGFGTVYYGRL--NEIDVAVKMLSSS----------SAQGFQQFQAEVKLLMRV-HHRNLTSLVGHCDEDNQTALI 639 (878)
Q Consensus 573 ~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~----------~~~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV 639 (878)
..+.|+.|.+..++. -+..+|+|++... .....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 456777776665443 4688999998754 123456799999999999 699999999999999999999
Q ss_pred eeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccC
Q 002809 640 YEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATD 719 (878)
Q Consensus 640 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 719 (878)
|||++|++|.++|.+ ...++.. +|+.||+.||+|||++ +||||||||+|||+++++++||+|||+++.....
T Consensus 321 MEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 999999999999986 4556654 5889999999999999 9999999999999999999999999999876433
Q ss_pred CCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCC
Q 002809 720 ANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCK 765 (878)
Q Consensus 720 ~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~ 765 (878)
. ......+||++|||||++.+ .+..++|+||+|++++++.++.
T Consensus 393 ~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 393 C--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred C--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 2 22334679999999999976 4667899999999988776554
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=9.9e-25 Score=256.67 Aligned_cols=184 Identities=16% Similarity=0.215 Sum_probs=148.8
Q ss_pred cccccccccEEEEEEEEcceeEEEEEeccCCh--------hhHHHHHHHHHHHHHhcccceeeeeecccCCCcceeEeee
Q 002809 571 ERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSA--------QGFQQFQAEVKLLMRVHHRNLTSLVGHCDEDNQTALIYEF 642 (878)
Q Consensus 571 ~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~--------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~Ey 642 (878)
.+.||+|+||.||+++..+..+++|+...... ...+.+.+|++++++++||||+++..++...+..++||||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~ 420 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY 420 (540)
T ss_dssp -------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred CCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence 46899999999999988889999998754321 1235689999999999999999777776677888999999
Q ss_pred ccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCC
Q 002809 643 MANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANT 722 (878)
Q Consensus 643 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~ 722 (878)
+++++|.++++. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++........
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~ 485 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDK 485 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcccc
Confidence 999999999875 568999999999999998 9999999999999999 9999999999876432211
Q ss_pred c-----ccccccCCCCccCcccccc--CCCCCccchhhHHHHHHHHHhCCCCCC
Q 002809 723 H-----VSTVVAGTPGYLDPEYYTS--NRLTEKSDVYSFGVVILEIITCKPAIS 769 (878)
Q Consensus 723 ~-----~~~~~~gt~~Y~APE~~~~--~~~t~ksDV~S~Gvvl~elltG~~p~~ 769 (878)
. ......||+.|||||++.. ..|+.++|+|+..+-.++.+.++.+|.
T Consensus 486 ~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 486 AVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 1 1235679999999999986 568889999999999888888777663
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82 E-value=1e-20 Score=204.14 Aligned_cols=141 Identities=14% Similarity=0.128 Sum_probs=114.6
Q ss_pred hcccccccccEEEEEEEEc-ceeEEEEEeccCCh------------------hhHHHHHHHHHHHHHhcccceeeeeecc
Q 002809 570 FERTLGKGGFGTVYYGRLN-EIDVAVKMLSSSSA------------------QGFQQFQAEVKLLMRVHHRNLTSLVGHC 630 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~~-~~~vAvK~l~~~~~------------------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~ 630 (878)
+.+.||+|+||.||+|+.. ++.||||+++.... .....+.+|++++.+++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 3489999999999999984 48999999964321 13467899999999999 5 6666655
Q ss_pred cCCCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeec
Q 002809 631 DEDNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADF 710 (878)
Q Consensus 631 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DF 710 (878)
.. +..++||||+++|+|.+ +.. .....++.|+++||+|||+. +|+||||||+|||++ ++.+||+||
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCC
T ss_pred ec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEEC
Confidence 43 56799999999999998 432 12457999999999999998 999999999999999 999999999
Q ss_pred CCccccccCCCCcccccccCCCCccCcccccc
Q 002809 711 GLSKSFATDANTHVSTVVAGTPGYLDPEYYTS 742 (878)
Q Consensus 711 Gla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~ 742 (878)
|+++. +..++|||++..
T Consensus 237 G~a~~---------------~~~~~a~e~l~r 253 (282)
T 1zar_A 237 PQSVE---------------VGEEGWREILER 253 (282)
T ss_dssp TTCEE---------------TTSTTHHHHHHH
T ss_pred CCCeE---------------CCCCCHHHHHHH
Confidence 99863 345788998753
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70 E-value=2.9e-17 Score=174.75 Aligned_cols=133 Identities=19% Similarity=0.278 Sum_probs=103.3
Q ss_pred hcccccccccEEEEEEEE--ccee--EEEEEeccCChh------------------------hHHHHHHHHHHHHHhccc
Q 002809 570 FERTLGKGGFGTVYYGRL--NEID--VAVKMLSSSSAQ------------------------GFQQFQAEVKLLMRVHHR 621 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~--~~~~--vAvK~l~~~~~~------------------------~~~~f~~Ei~~L~~l~H~ 621 (878)
+.+.||+|+||.||+|+. .++. ||||+++..... ....+.+|+..|.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999999988 5688 999987543111 123688999999999988
Q ss_pred ce--eeeeecccCCCcceeEeeeccC-C----ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEecCCC
Q 002809 622 NL--TSLVGHCDEDNQTALIYEFMAN-G----NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLH-NGCKPPIVHRDVK 693 (878)
Q Consensus 622 nI--v~l~g~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~~ivHrDLK 693 (878)
++ ..++.. ...++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+|||||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlk 198 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHADLS 198 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCC
Confidence 64 333332 367899999952 5 55554332 234567889999999999999 77 99999999
Q ss_pred CccEEEcCCCcEEEeecCCcccc
Q 002809 694 STNILLNEKLQAKLADFGLSKSF 716 (878)
Q Consensus 694 p~NILl~~~~~~kL~DFGla~~~ 716 (878)
|+|||+++ .++|+|||++...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999754
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.51 E-value=1.4e-14 Score=161.12 Aligned_cols=136 Identities=11% Similarity=0.096 Sum_probs=93.5
Q ss_pred hhcccccccccEEEEEEEEcc-eeEEEEEeccCCh--------------hhHHHHHHHHHHHHHhcccceeeeeecccC-
Q 002809 569 NFERTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSA--------------QGFQQFQAEVKLLMRVHHRNLTSLVGHCDE- 632 (878)
Q Consensus 569 ~f~~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~--------------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~- 632 (878)
.+.+.||+|++|.||+|...+ +.||||+++.... ........+.++.....|+|+.++......
T Consensus 98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~v 177 (397)
T 4gyi_A 98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPV 177 (397)
T ss_dssp EEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred EecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 456789999999999998754 8999998753210 001112222222222334444433322111
Q ss_pred -----CCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCC----
Q 002809 633 -----DNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKL---- 703 (878)
Q Consensus 633 -----~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~---- 703 (878)
....++||||+++++|.++... +....++.|++.+|.+||+. +||||||||.|||+++++
T Consensus 178 p~p~~~~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~d 246 (397)
T 4gyi_A 178 PEPIAQSRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAED 246 (397)
T ss_dssp CCEEEEETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSSC
T ss_pred CeeeeccCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCccc
Confidence 1234799999999888766432 12356889999999999998 999999999999998877
Q ss_pred ------cEEEeecCCccc
Q 002809 704 ------QAKLADFGLSKS 715 (878)
Q Consensus 704 ------~~kL~DFGla~~ 715 (878)
.+.|+||+.+..
T Consensus 247 ~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 247 PSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp TTSEEEEEEECCCTTCEE
T ss_pred ccccccceEEEEeCCccc
Confidence 389999998764
No 256
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.45 E-value=9.1e-14 Score=151.91 Aligned_cols=124 Identities=30% Similarity=0.473 Sum_probs=106.9
Q ss_pred cccchHHHHHHHHHhhCC---CCCCC--CCCCCCCCCcccceecCCCCCCCCcEEEEEecCCCccc--cchhhhhccCCC
Q 002809 361 TEQIDVDAITNIKATYGL---KKNWQ--GDPCAPLAYWWDGLNCSYGDSSSPRITYLNLSSSGLKG--DITSYVSNLTSL 433 (878)
Q Consensus 361 t~~~d~~al~~lk~~~~~---~~~w~--~~pc~~~~~~w~gv~C~~~~~~~~~l~~l~l~~n~l~g--~ip~~~~~l~~L 433 (878)
..+.|..||.++|+.+.. ..+|. .+||.. .|.||+|+.. ....+|+.|+|++|+|+| .+|+.|++|++|
T Consensus 3 c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~---~w~gv~C~~~-~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNR---TWLGVLCDTD-TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTT---CSTTEEECCS-SSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcC---CCcceEeCCC-CCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 467899999999998853 45896 367721 4999999742 123689999999999999 999999999999
Q ss_pred CEEeCcC-CcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcccccC
Q 002809 434 QFLDLSN-NNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 434 ~~L~Ls~-N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
+.|+|++ |+++|.+|..++.++ |++|+|++|+++|.+|..+.++++|+.|+++.+
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 135 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYN 135 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCC
Confidence 9999994 999999999999999 999999999999999999999999997776544
No 257
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.34 E-value=3.8e-13 Score=165.05 Aligned_cols=96 Identities=30% Similarity=0.557 Sum_probs=85.4
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
.+.|+.|+|++|+|+|.||.+|++|++|+.|+|++|+|+|.||..++.++ |+.|||++|+|+|.||.++.+++.|+.|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 46789999999999999999999999999999999999999999999999 99999999999999999999988877665
Q ss_pred c---------------------ccCCCCCCCCCc--cccC
Q 002809 485 L---------------------SVGGNPGLCSKI--SCKK 501 (878)
Q Consensus 485 l---------------------~~~~n~~lc~~~--~c~~ 501 (878)
+ +|.||+++||.+ .|..
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 4 456899999863 5764
No 258
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.31 E-value=1.2e-12 Score=161.19 Aligned_cols=121 Identities=20% Similarity=0.273 Sum_probs=104.5
Q ss_pred cccccchHHHHHHHHHhhCCCCCCCC-------CC--CCCCCCcc------------cceecCCCCCCCCcEEEEEecCC
Q 002809 359 LQTEQIDVDAITNIKATYGLKKNWQG-------DP--CAPLAYWW------------DGLNCSYGDSSSPRITYLNLSSS 417 (878)
Q Consensus 359 ~~t~~~d~~al~~lk~~~~~~~~w~~-------~p--c~~~~~~w------------~gv~C~~~~~~~~~l~~l~l~~n 417 (878)
..+..+|..||.++|+.+..+ +|+. +| | .| .||+|+. ..+|+.|+|++|
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~-~W~~~~~~~~~~~~~C-----~W~~~~~~~~w~~~~GV~C~~----~~~V~~L~Ls~~ 333 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK-NWRYYSGTINNTIHSL-----NWNFNKELDMWGDQPGVDLDN----NGRVTGLSLAGF 333 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG-GCCCCCSSCSSCCCCC-----SCCCSSCGGGTTCCTTEEECT----TSCEEEEECTTT
T ss_pred cccchHHHHHHHHHHHHcCCC-CCCcCCCcccccCCcc-----ccccccccccccCcCceEecC----CCCEEEEECccC
Confidence 345578999999999998655 8852 46 5 68 9999974 369999999999
Q ss_pred CccccchhhhhccCCCCEEeC-cCCcccCc--------------------------------------------------
Q 002809 418 GLKGDITSYVSNLTSLQFLDL-SNNNLTGS-------------------------------------------------- 446 (878)
Q Consensus 418 ~l~g~ip~~~~~l~~L~~L~L-s~N~l~g~-------------------------------------------------- 446 (878)
+|+|.||++|++|++|+.||| ++|.|+|.
T Consensus 334 ~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~ 413 (876)
T 4ecn_A 334 GAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPE 413 (876)
T ss_dssp CCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTT
T ss_pred CCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcc
Confidence 999999999999999999999 88877766
Q ss_pred --------------------------CCccCCCCc-ceEEEecCCcCCC-----------------CCchhhh--hcccC
Q 002809 447 --------------------------VPDFLSKLP-LRTLNLQGNKLNG-----------------SVPVELL--ERSKN 480 (878)
Q Consensus 447 --------------------------iP~~~~~l~-L~~L~ls~N~l~g-----------------~iP~~l~--~~~~l 480 (878)
||..+++|+ |+.|+|++|+|+| .||.+++ ++++|
T Consensus 414 ~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L 493 (876)
T 4ecn_A 414 MKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDL 493 (876)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred ccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCC
Confidence 899999999 9999999999999 4999988 99999
Q ss_pred CCcccccCC
Q 002809 481 GSLSLSVGG 489 (878)
Q Consensus 481 ~~l~l~~~~ 489 (878)
+.|+++.+.
T Consensus 494 ~~L~Ls~N~ 502 (876)
T 4ecn_A 494 TDVELYNCP 502 (876)
T ss_dssp CEEEEESCT
T ss_pred CEEECcCCC
Confidence 987776554
No 259
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.31 E-value=1.3e-12 Score=156.71 Aligned_cols=120 Identities=22% Similarity=0.276 Sum_probs=102.3
Q ss_pred ccccchHHHHHHHHHhhCCC------------CCCCC--CCCCCCCCcc---cceecCCCCCCCCcEEEEEecCCCcccc
Q 002809 360 QTEQIDVDAITNIKATYGLK------------KNWQG--DPCAPLAYWW---DGLNCSYGDSSSPRITYLNLSSSGLKGD 422 (878)
Q Consensus 360 ~t~~~d~~al~~lk~~~~~~------------~~w~~--~pc~~~~~~w---~gv~C~~~~~~~~~l~~l~l~~n~l~g~ 422 (878)
.....|..||.++++..+.. .+|+. ++| .| .||+|+.. .+|+.|+|++|+|+|.
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-----~w~~~~GV~C~~~----~~V~~L~L~~~~l~g~ 96 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-----MWGAQPGVSLNSN----GRVTGLSLEGFGASGR 96 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-----GTTCCTTEEECTT----CCEEEEECTTSCCEEE
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-----cccCCCCeEEcCC----CCEEEEEecCcccCCc
Confidence 34567999999999887432 25752 455 68 99999742 6999999999999999
Q ss_pred chhhhhccCCCCEEeCcCC-------------------------------------------------------------
Q 002809 423 ITSYVSNLTSLQFLDLSNN------------------------------------------------------------- 441 (878)
Q Consensus 423 ip~~~~~l~~L~~L~Ls~N------------------------------------------------------------- 441 (878)
+|++|++|++|+.|||++|
T Consensus 97 lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~ 176 (636)
T 4eco_A 97 VPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIK 176 (636)
T ss_dssp ECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCC
T ss_pred CChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccc
Confidence 9999999999999999998
Q ss_pred -----------------cccCcCCccCCCCc-ceEEEecCCcCCCC-----------------Cchhhh--hcccCCCcc
Q 002809 442 -----------------NLTGSVPDFLSKLP-LRTLNLQGNKLNGS-----------------VPVELL--ERSKNGSLS 484 (878)
Q Consensus 442 -----------------~l~g~iP~~~~~l~-L~~L~ls~N~l~g~-----------------iP~~l~--~~~~l~~l~ 484 (878)
+|+| ||..+++++ |+.|+|++|+|+|. +|.+++ ++++|+.|+
T Consensus 177 ~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~ 255 (636)
T 4eco_A 177 KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE 255 (636)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEE
Confidence 4556 999999999 99999999999996 999999 999999877
Q ss_pred cccCC
Q 002809 485 LSVGG 489 (878)
Q Consensus 485 l~~~~ 489 (878)
++.+.
T Consensus 256 L~~n~ 260 (636)
T 4eco_A 256 VYNCP 260 (636)
T ss_dssp EECCT
T ss_pred ecCCc
Confidence 76553
No 260
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.23 E-value=1.6e-12 Score=151.06 Aligned_cols=138 Identities=13% Similarity=0.106 Sum_probs=70.2
Q ss_pred eeEEEEEecCCCCCchh----hhhhhhheeccccccccccchHH-HHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCC
Q 002809 328 NYSFSLYKTGNSTLPPI----INAIEVYSVKEFLQLQTEQIDVD-AITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYG 402 (878)
Q Consensus 328 ~~~~~l~~t~~s~lpp~----inalEi~~l~~~~~~~t~~~d~~-al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~ 402 (878)
...+.|..+..+.++|. +..|+.+.+..+...+..|..+. .|..|+.+....+...+.|.
T Consensus 122 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--------------- 186 (487)
T 3oja_A 122 KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--------------- 186 (487)
T ss_dssp CEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC---------------
T ss_pred CCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc---------------
Confidence 45556666666665442 33555666655543333344432 23333333322222221111
Q ss_pred CCCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCC-CCCchhhhhcccC
Q 002809 403 DSSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLN-GSVPVELLERSKN 480 (878)
Q Consensus 403 ~~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~-g~iP~~l~~~~~l 480 (878)
....++|+.|+|++|+|+| +|+.++.+++|+.|+|++|+|++ +|..++.++ |+.|+|++|.+. |.+|..+..++.+
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L 264 (487)
T 3oja_A 187 QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV 264 (487)
T ss_dssp CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHH
T ss_pred cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCC
Confidence 0124456666666666664 44446666666666666666663 565566665 666666666665 5555555555544
Q ss_pred CC
Q 002809 481 GS 482 (878)
Q Consensus 481 ~~ 482 (878)
..
T Consensus 265 ~~ 266 (487)
T 3oja_A 265 QT 266 (487)
T ss_dssp HH
T ss_pred cE
Confidence 43
No 261
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.14 E-value=1.5e-10 Score=115.11 Aligned_cols=143 Identities=14% Similarity=0.104 Sum_probs=92.4
Q ss_pred eEeccCCCCCCCCccCCCceeeecCccccccCccceeec----cccccccccc-CceeccCCCCcceeEeeccCCCeeEE
Q 002809 28 ISLDCGLPKDSNYTETTTGINYISDDAFVETGIGKSILQ----EFQTGQQKQM-RRVRSFPDGIRNCYRFNLTKGSRYLI 102 (878)
Q Consensus 28 ~~idCG~~~~~~~~~~~~~~~~~~D~~~~~~g~~~~~~~----~~~~~~~~~~-~tlR~Fp~g~~nCY~l~~~~~~~ylv 102 (878)
..||||++.. + +..+++|.+|..|...|....... ........+. +|-|+||. .-||.+|+.++|+|+|
T Consensus 8 ~~INcGg~~~---~-d~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~--~~tY~f~v~~~G~Y~V 81 (174)
T 2jwp_A 8 WAVNAGGESH---V-DVHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNED--SFGYDIPIKEEGEYVL 81 (174)
T ss_dssp EEEEETSSSE---E-ETTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCS--CEEEEEECCSCEEEEE
T ss_pred EEEECCCCCc---c-CCCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCCC--CeEEEEEeCCCeEEEE
Confidence 3799997543 2 357899999998864443221110 0001112223 99999996 6799999999999999
Q ss_pred EEEeeecCCCCCCCCCceeEEEcccee-eEEEecCCc--cceeeeeEEEE-------------ccCCceEEEEeecCCCC
Q 002809 103 RTNFMYGNYDEKNSVPGFDMFIGPNKW-LSVTFENNA--SFVAIGEIIHI-------------LPSDYLHICLVNTGLGT 166 (878)
Q Consensus 103 R~~f~ygnyd~~~~~p~Fd~~~~~~~w-~~v~~~~~~--~~~~~~e~~~~-------------~~~~~~~vCl~~~~~~~ 166 (878)
|.-|.--.|.. .....||+++++..- ...++.... ......+..+. ..+..+.|.|.....+.
T Consensus 82 rLhF~ei~~~~-~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~ 160 (174)
T 2jwp_A 82 VLKFAEVYFAQ-SQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDN 160 (174)
T ss_dssp EEEEECCSCCC-SSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCS
T ss_pred EEEEeccccCC-CCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCC
Confidence 99997766654 455789999999642 333332111 11122344443 24556888888543567
Q ss_pred cceeeeeeeec
Q 002809 167 PFISALELRPL 177 (878)
Q Consensus 167 Pfis~lel~~l 177 (878)
||||+||+.+-
T Consensus 161 a~inaIEI~~~ 171 (174)
T 2jwp_A 161 PKVCALFIMKG 171 (174)
T ss_dssp SSEEEEEEESS
T ss_pred cEEEEEEEEeC
Confidence 99999999973
No 262
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.14 E-value=2.2e-11 Score=125.93 Aligned_cols=150 Identities=15% Similarity=0.120 Sum_probs=105.3
Q ss_pred EEEEEecCCCCCchhhh-hhhhheeccccccccc-cch-HHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCC
Q 002809 330 SFSLYKTGNSTLPPIIN-AIEVYSVKEFLQLQTE-QID-VDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSS 406 (878)
Q Consensus 330 ~~~l~~t~~s~lpp~in-alEi~~l~~~~~~~t~-~~d-~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~ 406 (878)
.+.+..+....+|+.+. .++.+.+..+. .+.+ +.+ +..+..|+.+....+...+.+-. . ....
T Consensus 15 ~l~~s~n~l~~iP~~~~~~~~~L~L~~N~-l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~----~---------~~~l 80 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHIPQYTAELRLNNNE-FTVLEATGIFKKLPQLRKINFSNNKITDIEEG----A---------FEGA 80 (220)
T ss_dssp EEECCSSCCSSCCSCCCTTCSEEECCSSC-CCEECCCCCGGGCTTCCEEECCSSCCCEECTT----T---------TTTC
T ss_pred EeEeCCCCcccCccCCCCCCCEEEcCCCc-CCccCchhhhccCCCCCEEECCCCcCCEECHH----H---------hCCC
Confidence 34444444555554322 34555555544 3333 222 44444444444333333322210 1 1346
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSL 485 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l 485 (878)
++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+..++ |+.|+|++|+|++..|..+..+++|+. +
T Consensus 81 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~--L 158 (220)
T 2v70_A 81 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLST--L 158 (220)
T ss_dssp TTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCE--E
T ss_pred CCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCE--E
Confidence 7899999999999988888899999999999999999998899999999 999999999999888999999988884 5
Q ss_pred ccCCCCCCCC
Q 002809 486 SVGGNPGLCS 495 (878)
Q Consensus 486 ~~~~n~~lc~ 495 (878)
.+.+|+..|.
T Consensus 159 ~L~~N~l~c~ 168 (220)
T 2v70_A 159 NLLANPFNCN 168 (220)
T ss_dssp ECCSCCEECS
T ss_pred EecCcCCcCC
Confidence 6678888775
No 263
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.13 E-value=6.9e-11 Score=117.00 Aligned_cols=101 Identities=24% Similarity=0.210 Sum_probs=86.1
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCc
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~ 465 (878)
.|+.+.|+.+. ...+.|+.|+|++|+|++..|..|++|++|+.|+|++|+|++..|..+..++ |+.|+|++|+
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 68889998542 2357899999999999998899999999999999999999976666788999 9999999999
Q ss_pred CCCCCchhhhhcccCCCcccccCCCCCCCC
Q 002809 466 LNGSVPVELLERSKNGSLSLSVGGNPGLCS 495 (878)
Q Consensus 466 l~g~iP~~l~~~~~l~~l~l~~~~n~~lc~ 495 (878)
|++..|..+..+++|+. +.+.+|+..|.
T Consensus 90 l~~~~~~~~~~l~~L~~--L~L~~N~~~c~ 117 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTH--IWLLNNPWDCA 117 (170)
T ss_dssp CCCCCTTTTTTCTTCCE--EECCSSCBCTT
T ss_pred cCEeCHHHhcCCCCCCE--EEeCCCCCCCC
Confidence 99766666888888874 56678888776
No 264
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.13 E-value=2.4e-11 Score=149.00 Aligned_cols=115 Identities=30% Similarity=0.442 Sum_probs=70.9
Q ss_pred ccccchHHHHHHHHHhhC---CCCCCC--CCCCCCCCCcccceecCCCCCCCCcEEEEEecCCCcccc---chhh-----
Q 002809 360 QTEQIDVDAITNIKATYG---LKKNWQ--GDPCAPLAYWWDGLNCSYGDSSSPRITYLNLSSSGLKGD---ITSY----- 426 (878)
Q Consensus 360 ~t~~~d~~al~~lk~~~~---~~~~w~--~~pc~~~~~~w~gv~C~~~~~~~~~l~~l~l~~n~l~g~---ip~~----- 426 (878)
...++|..||.++|+.+. ...+|+ .|+| .|.||+|+ ..+|+.|+|++++++|. +|+.
T Consensus 8 ~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-----~w~gv~C~-----~~~v~~L~L~~~~l~g~~~~l~~~l~~L~ 77 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-----TFDGVTCR-----DDKVTSIDLSSKPLNVGFSAVSSSLLSLT 77 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-----GSTTEEEE-----TTEEEEEECTTSCCCEEHHHHHHHTTTCT
T ss_pred cCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-----CCcceEEC-----CCcEEEEECCCCCcCCccCccChhHhccC
Confidence 346789999999998774 356895 3567 89999997 24777777777777776 5543
Q ss_pred ------------------hhccCCCCEEeCcCCcccCcCCc--cCCCCc-ceEEEecCCcCCCCCchhh-hhcccCCCcc
Q 002809 427 ------------------VSNLTSLQFLDLSNNNLTGSVPD--FLSKLP-LRTLNLQGNKLNGSVPVEL-LERSKNGSLS 484 (878)
Q Consensus 427 ------------------~~~l~~L~~L~Ls~N~l~g~iP~--~~~~l~-L~~L~ls~N~l~g~iP~~l-~~~~~l~~l~ 484 (878)
|++|++|++|||++|+|+|.+|. .++.++ |++|+|++|+++|.+|..+ .++++|+.|+
T Consensus 78 ~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 157 (768)
T 3rgz_A 78 GLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD 157 (768)
T ss_dssp TCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEE
T ss_pred cccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEE
Confidence 34445555555555555555554 455555 5555555555555544443 3344444333
No 265
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.08 E-value=6.7e-11 Score=123.03 Aligned_cols=149 Identities=20% Similarity=0.200 Sum_probs=109.2
Q ss_pred EEEEecCCCCCchh-hhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCCcE
Q 002809 331 FSLYKTGNSTLPPI-INAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSPRI 409 (878)
Q Consensus 331 ~~l~~t~~s~lpp~-inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~~l 409 (878)
+.........+|+. ...++.+.+..+......|..+..+..|+.+....+.+..-|.. .+ ...++|
T Consensus 24 v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~----~~---------~~l~~L 90 (229)
T 3e6j_A 24 VDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVG----VF---------DSLTQL 90 (229)
T ss_dssp EECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT----TT---------TTCTTC
T ss_pred eEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChh----hc---------ccCCCc
Confidence 44444555666653 34777788877664444455566666666655444444433321 11 346789
Q ss_pred EEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcccccC
Q 002809 410 TYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 410 ~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
+.|+|++|+|++..+..|..|++|+.|+|++|+|+ .||..+..++ |+.|+|++|+|++..+..+..+++|+ .+.+.
T Consensus 91 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~l~ 167 (229)
T 3e6j_A 91 TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLT--HAYLF 167 (229)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCC--EEECT
T ss_pred CEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCC--EEEee
Confidence 99999999999777777899999999999999999 8999999999 99999999999965556688888887 45667
Q ss_pred CCCCCCC
Q 002809 489 GNPGLCS 495 (878)
Q Consensus 489 ~n~~lc~ 495 (878)
+|+..|.
T Consensus 168 ~N~~~c~ 174 (229)
T 3e6j_A 168 GNPWDCE 174 (229)
T ss_dssp TSCBCTT
T ss_pred CCCccCC
Confidence 8888775
No 266
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.06 E-value=7.9e-11 Score=129.42 Aligned_cols=80 Identities=19% Similarity=0.256 Sum_probs=52.2
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
.++|+.|+|++|+|++ +|+.+++|++|+.|+|++|++.|.+|..++.++ |+.|+|++|++.|.+|..+.++++|+.|+
T Consensus 205 l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 283 (328)
T 4fcg_A 205 LQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLD 283 (328)
T ss_dssp CTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEE
T ss_pred CCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEe
Confidence 3466666666666663 555666666666666666666666666666666 66666666666666666666666666444
Q ss_pred cc
Q 002809 485 LS 486 (878)
Q Consensus 485 l~ 486 (878)
++
T Consensus 284 L~ 285 (328)
T 4fcg_A 284 LR 285 (328)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 267
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.06 E-value=1.8e-10 Score=121.94 Aligned_cols=138 Identities=15% Similarity=0.115 Sum_probs=109.3
Q ss_pred hcccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhc-ccceeeeeecccCCCcceeEeeeccCCCh
Q 002809 570 FERTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH-HRNLTSLVGHCDEDNQTALIYEFMANGNL 648 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 648 (878)
+...++.|+.+.||+....+..+++|+...........+.+|+++++.++ |..+.++++++...+..++||||++|.+|
T Consensus 18 ~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l 97 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLC 97 (263)
T ss_dssp EEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEH
T ss_pred eEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeeh
Confidence 45677888889999998878899999987532222346889999999995 66788899998888889999999999998
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------------------
Q 002809 649 QEYLSDISKKVLSSQERLRIAVESAQGLEYLHNG---------------------------------------------- 682 (878)
Q Consensus 649 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~---------------------------------------------- 682 (878)
.+.+.. ......++.+++++|+.||+.
T Consensus 98 ~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (263)
T 3tm0_A 98 SEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL 170 (263)
T ss_dssp HHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHH
T ss_pred hhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHH
Confidence 876421 122347889999999999981
Q ss_pred ----------CCCCeEecCCCCccEEEcCCCcEEEeecCCcc
Q 002809 683 ----------CKPPIVHRDVKSTNILLNEKLQAKLADFGLSK 714 (878)
Q Consensus 683 ----------~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~ 714 (878)
..+.++|+|+++.|||++++..+.|+||+.+.
T Consensus 171 ~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876667899999764
No 268
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.05 E-value=9.7e-11 Score=128.71 Aligned_cols=127 Identities=13% Similarity=0.102 Sum_probs=99.4
Q ss_pred hhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCCcEEEEEecCCCccccch
Q 002809 345 INAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSPRITYLNLSSSGLKGDIT 424 (878)
Q Consensus 345 inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~~l~~l~l~~n~l~g~ip 424 (878)
+..|+.+.+..+. .+.+|..+..+..|+.+....+.+.+.|. .+ ...++|+.|+|++|++.|.+|
T Consensus 182 l~~L~~L~L~~n~-l~~lp~~l~~l~~L~~L~L~~N~l~~l~~-----~l---------~~l~~L~~L~Ls~n~~~~~~p 246 (328)
T 4fcg_A 182 LVNLQSLRLEWTG-IRSLPASIANLQNLKSLKIRNSPLSALGP-----AI---------HHLPKLEELDLRGCTALRNYP 246 (328)
T ss_dssp STTCCEEEEEEEC-CCCCCGGGGGCTTCCEEEEESSCCCCCCG-----GG---------GGCTTCCEEECTTCTTCCBCC
T ss_pred CCCCCEEECcCCC-cCcchHhhcCCCCCCEEEccCCCCCcCch-----hh---------ccCCCCCEEECcCCcchhhhH
Confidence 3456666666554 44666666655555554443344443332 11 345789999999999999999
Q ss_pred hhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcccc
Q 002809 425 SYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLS 486 (878)
Q Consensus 425 ~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~ 486 (878)
..++++++|+.|+|++|++.|.+|..++.++ |+.|+|++|++.|.+|.++++++++..+.+.
T Consensus 247 ~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~ 309 (328)
T 4fcg_A 247 PIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVP 309 (328)
T ss_dssp CCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECC
T ss_pred HHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCC
Confidence 9999999999999999999999999999999 9999999999999999999999998866554
No 269
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.05 E-value=1.9e-11 Score=133.40 Aligned_cols=89 Identities=28% Similarity=0.381 Sum_probs=78.3
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
...++|+.|+|++|+++|.+|. +..+++|+.|+|++|+|+|.+|..+..++ |+.|+|++|+|+|.+|.. .+++++.
T Consensus 218 ~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~- 294 (313)
T 1ogq_A 218 GSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFD- 294 (313)
T ss_dssp CTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSC-
T ss_pred hcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccC-
Confidence 3467899999999999987776 88999999999999999999999999999 999999999999999986 7777777
Q ss_pred cccccCCCCCCCCC
Q 002809 483 LSLSVGGNPGLCSK 496 (878)
Q Consensus 483 l~l~~~~n~~lc~~ 496 (878)
.+.+.+|+.+|+.
T Consensus 295 -~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 295 -VSAYANNKCLCGS 307 (313)
T ss_dssp -GGGTCSSSEEEST
T ss_pred -hHHhcCCCCccCC
Confidence 4567789999985
No 270
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.03 E-value=2.1e-10 Score=120.84 Aligned_cols=152 Identities=21% Similarity=0.183 Sum_probs=104.3
Q ss_pred eEEEEEecCCCCCchh----hhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCC
Q 002809 329 YSFSLYKTGNSTLPPI----INAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDS 404 (878)
Q Consensus 329 ~~~~l~~t~~s~lpp~----inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~ 404 (878)
..+.|..+..+.++|. +..|+.+.+..+......+..+..+..|+.+....+...+.|.. .+ .
T Consensus 38 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~~---------~ 104 (251)
T 3m19_A 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLG----VF---------D 104 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT----TT---------T
T ss_pred CEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChh----Hh---------c
Confidence 3455555555666552 34666666666553322233345555555544433444333321 11 3
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..++.++ |+.|+|++|+|++..|..+..+++|+.
T Consensus 105 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~- 183 (251)
T 3m19_A 105 HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQT- 183 (251)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-
T ss_pred ccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCE-
Confidence 457899999999999976677789999999999999999976666789998 999999999999777778888888874
Q ss_pred ccccCCCCCCCC
Q 002809 484 SLSVGGNPGLCS 495 (878)
Q Consensus 484 ~l~~~~n~~lc~ 495 (878)
+.+.+|+..|.
T Consensus 184 -L~l~~N~~~c~ 194 (251)
T 3m19_A 184 -ITLFGNQFDCS 194 (251)
T ss_dssp -EECCSCCBCTT
T ss_pred -EEeeCCceeCC
Confidence 56677887765
No 271
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.02 E-value=1.1e-10 Score=120.77 Aligned_cols=90 Identities=23% Similarity=0.228 Sum_probs=75.9
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
...++|+.|+|++|+|++..+..|..|++|+.|+|++|+|++..|..+..++ |+.|+|++|+|++..|..+..+++++
T Consensus 77 ~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~- 155 (220)
T 2v9t_B 77 QGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQ- 155 (220)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC-
T ss_pred hCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCC-
Confidence 3457899999999999955555678999999999999999988889999999 99999999999977677788888877
Q ss_pred cccccCCCCCCCC
Q 002809 483 LSLSVGGNPGLCS 495 (878)
Q Consensus 483 l~l~~~~n~~lc~ 495 (878)
.+.+.+|+..|.
T Consensus 156 -~L~L~~N~~~c~ 167 (220)
T 2v9t_B 156 -TMHLAQNPFICD 167 (220)
T ss_dssp -EEECCSSCEECS
T ss_pred -EEEeCCCCcCCC
Confidence 456778888775
No 272
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.01 E-value=3.9e-10 Score=117.16 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=83.1
Q ss_pred CCCCCCCCCCcccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-
Q 002809 383 QGDPCAPLAYWWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP- 455 (878)
Q Consensus 383 ~~~pc~~~~~~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~- 455 (878)
....| .|++|.|+... ..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+..++
T Consensus 15 ~~~~C-----s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 89 (229)
T 3e6j_A 15 SQCSC-----SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89 (229)
T ss_dssp TTCEE-----ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCCEE-----eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCC
Confidence 34577 79999998542 3457899999999999998899999999999999999999855456678898
Q ss_pred ceEEEecCCcCCCCCchhhhhcccCCCcccccC
Q 002809 456 LRTLNLQGNKLNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 456 L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
|+.|+|++|+|++..|..+..+++|+.|+++.+
T Consensus 90 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N 122 (229)
T 3e6j_A 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCN 122 (229)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCEEECCCCcCCccChhHhCcchhhCeEeccCC
Confidence 999999999999665666788888887666544
No 273
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.01 E-value=5.3e-10 Score=111.11 Aligned_cols=100 Identities=21% Similarity=0.191 Sum_probs=81.5
Q ss_pred ccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcC
Q 002809 394 WDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKL 466 (878)
Q Consensus 394 w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l 466 (878)
..-+.|+... ...++|+.|+|++|+|++..|..|++|++|+.|+|++|+|++..|..+..++ |+.|+|++|+|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp SSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 4456776431 2357899999999999999999999999999999999999975555678999 99999999999
Q ss_pred CCCCchhhhhcccCCCcccccCCCCCCCC
Q 002809 467 NGSVPVELLERSKNGSLSLSVGGNPGLCS 495 (878)
Q Consensus 467 ~g~iP~~l~~~~~l~~l~l~~~~n~~lc~ 495 (878)
++..|..+..+++|+. +.+.+|+..|.
T Consensus 94 ~~l~~~~~~~l~~L~~--L~L~~N~~~c~ 120 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTH--IYLYNNPWDCE 120 (174)
T ss_dssp CCCCTTTTTTCTTCSE--EECCSSCBCTT
T ss_pred ceeCHHHhccccCCCE--EEeCCCCcccc
Confidence 9554445888888884 56678887765
No 274
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.01 E-value=2.5e-10 Score=115.24 Aligned_cols=89 Identities=25% Similarity=0.334 Sum_probs=79.5
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|+|++.+|..|+++++|+.|+|++|+|++..|..+..++ |+.|+|++|+|++.+|..+..+++|+.
T Consensus 52 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~- 130 (192)
T 1w8a_A 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTS- 130 (192)
T ss_dssp GCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCE-
T ss_pred cCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCE-
Confidence 456899999999999999999999999999999999999988888899999 999999999999988999999888874
Q ss_pred ccccCCCCCCCC
Q 002809 484 SLSVGGNPGLCS 495 (878)
Q Consensus 484 ~l~~~~n~~lc~ 495 (878)
+...+|+..|.
T Consensus 131 -L~L~~N~l~c~ 141 (192)
T 1w8a_A 131 -LNLASNPFNCN 141 (192)
T ss_dssp -EECTTCCBCCS
T ss_pred -EEeCCCCccCc
Confidence 55677887765
No 275
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.00 E-value=3e-10 Score=114.84 Aligned_cols=88 Identities=30% Similarity=0.358 Sum_probs=76.1
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
.++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..|..++ |+.|+|++|+|++..+..+..+++|+ .
T Consensus 53 l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~ 130 (193)
T 2wfh_A 53 YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALS--H 130 (193)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCC--E
T ss_pred ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCcccc--E
Confidence 46899999999999988888999999999999999999988888899999 99999999999954444677788877 4
Q ss_pred cccCCCCCCCC
Q 002809 485 LSVGGNPGLCS 495 (878)
Q Consensus 485 l~~~~n~~lc~ 495 (878)
+.+.+|+..|.
T Consensus 131 L~L~~N~~~C~ 141 (193)
T 2wfh_A 131 LAIGANPLYCD 141 (193)
T ss_dssp EECCSSCEECS
T ss_pred EEeCCCCeecC
Confidence 56788888875
No 276
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.98 E-value=4.9e-10 Score=123.73 Aligned_cols=100 Identities=25% Similarity=0.294 Sum_probs=82.5
Q ss_pred cccceecCCC--------CCCCCcEEEEEecC-CCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEec
Q 002809 393 WWDGLNCSYG--------DSSSPRITYLNLSS-SGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQ 462 (878)
Q Consensus 393 ~w~gv~C~~~--------~~~~~~l~~l~l~~-n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls 462 (878)
.|..|.|+.. .....+|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|+.|+ |+.|+|+
T Consensus 9 ~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 9 GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred cCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 6889999865 23346799999996 999988889999999999999999999999999999999 9999999
Q ss_pred CCcCCCCCchhhhhcccCCCcccccCCCCCCCC
Q 002809 463 GNKLNGSVPVELLERSKNGSLSLSVGGNPGLCS 495 (878)
Q Consensus 463 ~N~l~g~iP~~l~~~~~l~~l~l~~~~n~~lc~ 495 (878)
+|+|++ +|..+.....|+ .+.+.+|+..|.
T Consensus 89 ~N~l~~-~~~~~~~~~~L~--~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALES-LSWKTVQGLSLQ--ELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSC-CCSTTTCSCCCC--EEECCSSCCCCC
T ss_pred CCccce-eCHHHcccCCce--EEEeeCCCccCC
Confidence 999995 555544433365 456677888775
No 277
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.96 E-value=5.7e-10 Score=119.03 Aligned_cols=150 Identities=23% Similarity=0.225 Sum_probs=103.6
Q ss_pred EEEEEecCCCCCchh--hhhhhhheeccccccccccch-HHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCC
Q 002809 330 SFSLYKTGNSTLPPI--INAIEVYSVKEFLQLQTEQID-VDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSS 406 (878)
Q Consensus 330 ~~~l~~t~~s~lpp~--inalEi~~l~~~~~~~t~~~d-~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~ 406 (878)
.+.+..+....++.+ +..|+.+.+..+. .+.++.+ +..+..|+.+....+.+.+.|.. . ....
T Consensus 67 ~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~---------~~~l 132 (272)
T 3rfs_A 67 YLALGGNKLHDISALKELTNLTYLILTGNQ-LQSLPNGVFDKLTNLKELVLVENQLQSLPDG----V---------FDKL 132 (272)
T ss_dssp EEECTTSCCCCCGGGTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECTTSCCCCCCTT----T---------TTTC
T ss_pred EEECCCCCCCCchhhcCCCCCCEEECCCCc-cCccChhHhcCCcCCCEEECCCCcCCccCHH----H---------hccC
Confidence 344444444444332 3366666666654 3444433 34555555544444444333221 0 1345
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSL 485 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l 485 (878)
++|+.|+|++|+|++..|..++++++|+.|+|++|+|++..|..++.++ |+.|+|++|+|++..|..+..+++|+. +
T Consensus 133 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~--L 210 (272)
T 3rfs_A 133 TNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQY--I 210 (272)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE--E
T ss_pred CCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCE--E
Confidence 7899999999999977777889999999999999999987777789999 999999999999877777888888885 4
Q ss_pred ccCCCCCCCC
Q 002809 486 SVGGNPGLCS 495 (878)
Q Consensus 486 ~~~~n~~lc~ 495 (878)
.+.+|+..|.
T Consensus 211 ~l~~N~~~~~ 220 (272)
T 3rfs_A 211 WLHDNPWDCT 220 (272)
T ss_dssp ECCSSCBCCC
T ss_pred EccCCCcccc
Confidence 5567777665
No 278
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=98.95 E-value=1.2e-09 Score=108.39 Aligned_cols=145 Identities=14% Similarity=0.141 Sum_probs=89.0
Q ss_pred EEEEEeeccCCCceeecCCCCCCceeecCCCCCce--eeccccccccCCCCCCCChhhhhccccccCCCCccceeeccCC
Q 002809 192 LFTRLDVASTTNLTIRYNDDVHDRSWFPYNSANWA--RINTSLTVDAESHNSYQPPAVVMNTAGTPKNASQSMDFYLETE 269 (878)
Q Consensus 192 ~~~r~~~g~~~~~~~ryp~D~~dR~W~~~~~~~~~--~~~t~~~~~~~~~~~~~~P~~v~~tA~t~~~~~~~l~~~~~~~ 269 (878)
...|.|||+.. +. |..+|.|.+-.. +. ...+...........+..|..|+|||=... .+++|..+
T Consensus 6 ~~~~INcGg~~---~~---d~~gr~w~~D~~--~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~-----~~~tY~f~ 72 (174)
T 2jwp_A 6 VIWAVNAGGES---HV---DVHGIHYRKDPL--EGRVGRASDYGMKLPILRSNPEDQVLYQTERYNE-----DSFGYDIP 72 (174)
T ss_dssp EEEEEEETSSS---EE---ETTTEEECSSCS--STTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCC-----SCEEEEEE
T ss_pred EEEEEECCCCC---cc---CCCCCEEcCCcC--cccCCcccccccceEecccCCCCchhhhhhccCC-----CCeEEEEE
Confidence 46799999864 22 678999975321 11 000000000011122457889999997643 24455444
Q ss_pred -CCCceEEEEEeeccccccccCceeEEEEEECCccccCCCCCCccc----ee-EEEc-----------ce-eecCceeEE
Q 002809 270 -DPSIQFYVYMHFAEVQILQANQSRQFNISLNGEHWYGPFSPNYLL----TT-TVFS-----------PT-ALIGGNYSF 331 (878)
Q Consensus 270 -~~~~~~~~~l~Fae~~~~~~~~~R~F~i~in~~~~~~~~~p~~~~----~~-~~~~-----------~~-~~~~~~~~~ 331 (878)
+++-.|.|.|||||+.. ++.++|+|||++||+...+.|++.... +. ..|. .. ...+|..+|
T Consensus 73 v~~~G~Y~VrLhF~ei~~-~~~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I 151 (174)
T 2jwp_A 73 IKEEGEYVLVLKFAEVYF-AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSV 151 (174)
T ss_dssp CCSCEEEEEEEEEECCSC-CCSSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEE
T ss_pred eCCCeEEEEEEEEecccc-CCCCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEE
Confidence 45689999999999974 567899999999999876555532111 10 0010 00 135677888
Q ss_pred EEEecCCCCCchhhhhhhhhe
Q 002809 332 SLYKTGNSTLPPIINAIEVYS 352 (878)
Q Consensus 332 ~l~~t~~s~lpp~inalEi~~ 352 (878)
++.+. +.-.|+|||+|++.
T Consensus 152 ~f~p~--~~~~a~inaIEI~~ 170 (174)
T 2jwp_A 152 EFVKG--YYDNPKVCALFIMK 170 (174)
T ss_dssp EEECS--SSCSSSEEEEEEES
T ss_pred EEecc--CCCCcEEEEEEEEe
Confidence 88764 24469999999975
No 279
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.95 E-value=4.1e-10 Score=121.50 Aligned_cols=133 Identities=23% Similarity=0.210 Sum_probs=97.3
Q ss_pred hhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCCcEEEEEecCCCccccchh
Q 002809 346 NAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSPRITYLNLSSSGLKGDITS 425 (878)
Q Consensus 346 nalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~~l~~l~l~~n~l~g~ip~ 425 (878)
..++.+.+..+. .+.+|..+..+.+|+.+....+.+.+.|-. .+ ...++|+.|+|++|+|++..+.
T Consensus 77 ~~L~~L~Ls~N~-l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~----~~---------~~l~~L~~L~L~~N~l~~~~~~ 142 (290)
T 1p9a_G 77 PVLGTLDLSHNQ-LQSLPLLGQTLPALTVLDVSFNRLTSLPLG----AL---------RGLGELQELYLKGNELKTLPPG 142 (290)
T ss_dssp TTCCEEECCSSC-CSSCCCCTTTCTTCCEEECCSSCCCCCCSS----TT---------TTCTTCCEEECTTSCCCCCCTT
T ss_pred CcCCEEECCCCc-CCcCchhhccCCCCCEEECCCCcCcccCHH----HH---------cCCCCCCEEECCCCCCCccChh
Confidence 356666666554 456666555555555444444444433321 11 3457899999999999977777
Q ss_pred hhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcccccCCCCCCCC
Q 002809 426 YVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLSVGGNPGLCS 495 (878)
Q Consensus 426 ~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~~~~n~~lc~ 495 (878)
.|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|+ .+|..+..+..++ .+.+.+||..|.
T Consensus 143 ~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~--~l~L~~Np~~C~ 210 (290)
T 1p9a_G 143 LLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLP--FAFLHGNPWLCN 210 (290)
T ss_dssp TTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCS--EEECCSCCBCCS
T ss_pred hcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCC--eEEeCCCCccCc
Confidence 789999999999999999954445568888 999999999999 8999998887776 466789999886
No 280
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=98.95 E-value=4e-10 Score=118.66 Aligned_cols=147 Identities=17% Similarity=0.126 Sum_probs=108.5
Q ss_pred eEEEEEecCCCCCchhh-hhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCC
Q 002809 329 YSFSLYKTGNSTLPPII-NAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSP 407 (878)
Q Consensus 329 ~~~~l~~t~~s~lpp~i-nalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~ 407 (878)
..+.+.......+|+.+ ..++.+.+..+......+..+..+.+|+.+....+...+.+-. .+ ...+
T Consensus 17 ~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~~---------~~l~ 83 (251)
T 3m19_A 17 KEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG----VF---------DDLT 83 (251)
T ss_dssp TEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT----TT---------TTCT
T ss_pred eEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh----Hh---------ccCC
Confidence 45566666777777644 4788888888764443444566666666655444454443321 11 3467
Q ss_pred cEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcccc
Q 002809 408 RITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLS 486 (878)
Q Consensus 408 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~ 486 (878)
+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+..++ |+.|+|++|+|++..|..+..+++|+.|+++
T Consensus 84 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 163 (251)
T 3m19_A 84 ELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLS 163 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECC
Confidence 899999999999987788899999999999999999966666688898 9999999999996666678889988877665
Q ss_pred cC
Q 002809 487 VG 488 (878)
Q Consensus 487 ~~ 488 (878)
.+
T Consensus 164 ~N 165 (251)
T 3m19_A 164 TN 165 (251)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 281
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=98.93 E-value=9.4e-10 Score=112.17 Aligned_cols=89 Identities=27% Similarity=0.305 Sum_probs=73.8
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..+..++ |+.|+|++|+|++..+..+..+++++.
T Consensus 74 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~- 152 (208)
T 2o6s_A 74 KLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQY- 152 (208)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-
T ss_pred CCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccE-
Confidence 457899999999999976677789999999999999999976667788898 999999999999665656788888875
Q ss_pred ccccCCCCCCCC
Q 002809 484 SLSVGGNPGLCS 495 (878)
Q Consensus 484 ~l~~~~n~~lc~ 495 (878)
+.+.+|+..|.
T Consensus 153 -L~l~~N~~~~~ 163 (208)
T 2o6s_A 153 -IWLHDNPWDCT 163 (208)
T ss_dssp -EECCSCCBCCC
T ss_pred -EEecCCCeecC
Confidence 45567776654
No 282
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.92 E-value=1.5e-09 Score=109.65 Aligned_cols=95 Identities=25% Similarity=0.227 Sum_probs=83.2
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCc
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~ 465 (878)
.|..+.|+.+. ..++.|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|..++ |+.|+|++|+
T Consensus 11 ~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 11 LDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 57888998542 34568999999999998 8999999999999999999999988888899999 9999999999
Q ss_pred CCCCCchhhhhcccCCCcccccC
Q 002809 466 LNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 466 l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
|++..|..+..+++|+.|+++.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N 112 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGN 112 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSS
T ss_pred cCEeCHHHhCCCCCCCEEECCCC
Confidence 99877888999999987766554
No 283
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.91 E-value=1.6e-09 Score=107.45 Aligned_cols=96 Identities=24% Similarity=0.226 Sum_probs=78.0
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCc
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~ 465 (878)
.|.+|.|+... ...++|+.|+|++|+|++..+..|+++++|+.|+|++|+|++..|..+..++ |+.|+|++|+
T Consensus 8 ~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp ETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 69999998542 2346899999999999977677789999999999999999966666678888 9999999999
Q ss_pred CCCCCchhhhhcccCCCcccccC
Q 002809 466 LNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 466 l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
|++..|..+..+++|+.|+++.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N 110 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTN 110 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSS
T ss_pred ccccCHHHhhCCcccCEEECcCC
Confidence 99766666788888887666544
No 284
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=98.90 E-value=1.1e-09 Score=110.50 Aligned_cols=96 Identities=22% Similarity=0.212 Sum_probs=82.8
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccchh-hhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCC
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITS-YVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGN 464 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~-~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N 464 (878)
.|+.+.|+... ....+|+.|+|++|+|++..|. .|++|++|+.|+|++|+|++.+|..+..++ |+.|+|++|
T Consensus 9 ~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 9 EGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 68899998542 2345899999999999966664 499999999999999999999999999999 999999999
Q ss_pred cCCCCCchhhhhcccCCCcccccC
Q 002809 465 KLNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 465 ~l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
+|++..|..+..+++|+.|+++.+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N 112 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDN 112 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSS
T ss_pred cCCccCHHHhcCCCCCCEEECCCC
Confidence 999888888999999987766544
No 285
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.90 E-value=2.7e-09 Score=112.12 Aligned_cols=127 Identities=17% Similarity=0.093 Sum_probs=96.6
Q ss_pred cccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccc--eeeeeecccCCCcceeEeeeccCCChhhh
Q 002809 575 GKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRN--LTSLVGHCDEDNQTALIYEFMANGNLQEY 651 (878)
Q Consensus 575 G~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~n--Iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~ 651 (878)
+.|..+.||+....+ ..+++|+.... ....+.+|+++++.+++.+ +.+++++...++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 455669999997654 67999997654 2356789999999997555 445888888777889999999998884
Q ss_pred hccccCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------------
Q 002809 652 LSDISKKVLSSQERLRIAVESAQGLEYLHNGC------------------------------------------------ 683 (878)
Q Consensus 652 l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------------------ 683 (878)
... .. ...++.++++.|+.||+..
T Consensus 104 ~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 221 11 2367788888888888642
Q ss_pred -------CCCeEecCCCCccEEEcCCCcEEEeecCCcc
Q 002809 684 -------KPPIVHRDVKSTNILLNEKLQAKLADFGLSK 714 (878)
Q Consensus 684 -------~~~ivHrDLKp~NILl~~~~~~kL~DFGla~ 714 (878)
...++|+|++|.|||++++..+.|+||+.+.
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887667899999875
No 286
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.89 E-value=6.8e-10 Score=127.41 Aligned_cols=152 Identities=17% Similarity=0.094 Sum_probs=108.5
Q ss_pred eeEEEEEecCCCCCchh----hhhhhhheeccccccccccch-HHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCC
Q 002809 328 NYSFSLYKTGNSTLPPI----INAIEVYSVKEFLQLQTEQID-VDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYG 402 (878)
Q Consensus 328 ~~~~~l~~t~~s~lpp~----inalEi~~l~~~~~~~t~~~d-~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~ 402 (878)
...+.|..+....+|+. +..|+.+.+..+...+.++.+ +..|.+|+.+....+...+.|-
T Consensus 149 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~--------------- 213 (452)
T 3zyi_A 149 LRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN--------------- 213 (452)
T ss_dssp CCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCC---------------
T ss_pred CCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccccc---------------
Confidence 34555555556666552 345666666654445555543 3334444433333333322221
Q ss_pred CCCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCC
Q 002809 403 DSSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNG 481 (878)
Q Consensus 403 ~~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~ 481 (878)
....++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+..++ |+.|+|++|+|++..+..+..+++|+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 293 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLV 293 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCC
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCC
Confidence 24567899999999999999999999999999999999999999999999999 99999999999966666677788777
Q ss_pred CcccccCCCCCCCCC
Q 002809 482 SLSLSVGGNPGLCSK 496 (878)
Q Consensus 482 ~l~l~~~~n~~lc~~ 496 (878)
.+.+.+||..|..
T Consensus 294 --~L~L~~Np~~CdC 306 (452)
T 3zyi_A 294 --ELHLHHNPWNCDC 306 (452)
T ss_dssp --EEECCSSCEECST
T ss_pred --EEEccCCCcCCCC
Confidence 4567789988763
No 287
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.87 E-value=1.9e-09 Score=114.72 Aligned_cols=91 Identities=31% Similarity=0.329 Sum_probs=76.0
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
...++|+.|+|++|+|++..+..|+.+++|+.|+|++|++++..|..+..++ |+.|+|++|+|++..+..+..+++|+
T Consensus 130 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~- 208 (270)
T 2o6q_A 130 DSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLK- 208 (270)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC-
T ss_pred CcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCC-
Confidence 3467899999999999976667799999999999999999976667788998 99999999999965555677788777
Q ss_pred cccccCCCCCCCCC
Q 002809 483 LSLSVGGNPGLCSK 496 (878)
Q Consensus 483 l~l~~~~n~~lc~~ 496 (878)
.+.+.+||..|..
T Consensus 209 -~L~l~~N~~~c~c 221 (270)
T 2o6q_A 209 -MLQLQENPWDCTC 221 (270)
T ss_dssp -EEECCSSCBCCSS
T ss_pred -EEEecCCCeeCCC
Confidence 4567888988763
No 288
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=6.4e-09 Score=115.46 Aligned_cols=140 Identities=16% Similarity=0.199 Sum_probs=107.5
Q ss_pred ccccccccEEEEEEEEcceeEEEEEec--cCC-hhhHHHHHHHHHHHHHhc--ccceeeeeecccCC---CcceeEeeec
Q 002809 572 RTLGKGGFGTVYYGRLNEIDVAVKMLS--SSS-AQGFQQFQAEVKLLMRVH--HRNLTSLVGHCDED---NQTALIYEFM 643 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~~~vAvK~l~--~~~-~~~~~~f~~Ei~~L~~l~--H~nIv~l~g~~~~~---~~~~lV~Ey~ 643 (878)
+.|+.|.++.||+.+..+..+++|+.. ... ......+.+|+.+++.++ +..+.+++.++.+. +..++||||+
T Consensus 44 ~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v 123 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFV 123 (359)
T ss_dssp EECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECC
T ss_pred EEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEec
Confidence 468899999999999888889999876 322 123457889999999997 45577888888766 4588999999
Q ss_pred cCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 002809 644 ANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGC---------------------------------------- 683 (878)
Q Consensus 644 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~---------------------------------------- 683 (878)
+|..+.+.. -..++..++..++.++++.|+.||...
T Consensus 124 ~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (359)
T 3dxp_A 124 SGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDS 199 (359)
T ss_dssp CCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred CCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHH
Confidence 998875422 123678888999999999999999721
Q ss_pred ---------------CCCeEecCCCCccEEEcCCCc--EEEeecCCccc
Q 002809 684 ---------------KPPIVHRDVKSTNILLNEKLQ--AKLADFGLSKS 715 (878)
Q Consensus 684 ---------------~~~ivHrDLKp~NILl~~~~~--~kL~DFGla~~ 715 (878)
.+.++|||+++.|||+++++. +.|.||+.+..
T Consensus 200 ~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 200 LMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999998753 68999998864
No 289
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.87 E-value=1.2e-09 Score=116.96 Aligned_cols=152 Identities=18% Similarity=0.138 Sum_probs=104.2
Q ss_pred eEEEEEecC-CCCCchh----hhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCC
Q 002809 329 YSFSLYKTG-NSTLPPI----INAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGD 403 (878)
Q Consensus 329 ~~~~l~~t~-~s~lpp~----inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~ 403 (878)
..+.+..+. ...++|. +..|+.+.+..+......|..+..+.+|+.+....+...+.|-. . .
T Consensus 83 ~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~----~---------~ 149 (285)
T 1ozn_A 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD----T---------F 149 (285)
T ss_dssp CEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT----T---------T
T ss_pred CEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHh----H---------h
Confidence 344444443 4444332 34566666665543222244444444444444333333332210 0 1
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
...++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..|..+..++ |+.|+|++|++++..|..+..+++|+.
T Consensus 150 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 229 (285)
T 1ozn_A 150 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (285)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred ccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCE
Confidence 3457899999999999966666799999999999999999999999999999 999999999999766677888888874
Q ss_pred cccccCCCCCCCC
Q 002809 483 LSLSVGGNPGLCS 495 (878)
Q Consensus 483 l~l~~~~n~~lc~ 495 (878)
+.+.+|+..|.
T Consensus 230 --L~l~~N~~~c~ 240 (285)
T 1ozn_A 230 --LRLNDNPWVCD 240 (285)
T ss_dssp --EECCSSCEECS
T ss_pred --EeccCCCccCC
Confidence 56678887765
No 290
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.87 E-value=5.5e-10 Score=107.51 Aligned_cols=82 Identities=21% Similarity=0.234 Sum_probs=65.4
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccC-cCCccCCCCc-ceEEEecCCcCCCCCc---hhhhhcc
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTG-SVPDFLSKLP-LRTLNLQGNKLNGSVP---VELLERS 478 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~l~-L~~L~ls~N~l~g~iP---~~l~~~~ 478 (878)
...++|+.|+|++|+|++.+|..++++++|+.|+|++|++++ ..|..++.++ |+.|+|++|++++..+ ..+..++
T Consensus 61 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~ 140 (149)
T 2je0_A 61 PKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLP 140 (149)
T ss_dssp CCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCT
T ss_pred hcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCC
Confidence 345688889999999988888888888999999999999886 3457788888 8999999998886554 4677788
Q ss_pred cCCCccc
Q 002809 479 KNGSLSL 485 (878)
Q Consensus 479 ~l~~l~l 485 (878)
+|+.|++
T Consensus 141 ~L~~L~l 147 (149)
T 2je0_A 141 QLTYLDG 147 (149)
T ss_dssp TCCEETT
T ss_pred CcccccC
Confidence 7776654
No 291
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.86 E-value=8e-10 Score=126.33 Aligned_cols=152 Identities=16% Similarity=0.118 Sum_probs=107.1
Q ss_pred eeEEEEEecCCCCCchh----hhhhhhheeccccccccccch-HHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCC
Q 002809 328 NYSFSLYKTGNSTLPPI----INAIEVYSVKEFLQLQTEQID-VDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYG 402 (878)
Q Consensus 328 ~~~~~l~~t~~s~lpp~----inalEi~~l~~~~~~~t~~~d-~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~ 402 (878)
...+.|..+....+|+. +..|+.+.+..+...+.++.+ +..|.+|+.+....+....-|-
T Consensus 138 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~--------------- 202 (440)
T 3zyj_A 138 LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--------------- 202 (440)
T ss_dssp CCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCC---------------
T ss_pred CceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccccc---------------
Confidence 34455555555555542 345666666654444444442 3333333333322233222221
Q ss_pred CCCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCC
Q 002809 403 DSSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNG 481 (878)
Q Consensus 403 ~~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~ 481 (878)
....++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+..++ |+.|+|++|+|++..+..+..+++|+
T Consensus 203 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 282 (440)
T 3zyj_A 203 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLE 282 (440)
T ss_dssp CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCC
T ss_pred cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCC
Confidence 24567899999999999998899999999999999999999998899999999 99999999999966666677788777
Q ss_pred CcccccCCCCCCCCC
Q 002809 482 SLSLSVGGNPGLCSK 496 (878)
Q Consensus 482 ~l~l~~~~n~~lc~~ 496 (878)
.+.+.+||..|..
T Consensus 283 --~L~L~~Np~~CdC 295 (440)
T 3zyj_A 283 --RIHLHHNPWNCNC 295 (440)
T ss_dssp --EEECCSSCEECSS
T ss_pred --EEEcCCCCccCCC
Confidence 4667899988863
No 292
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=98.83 E-value=4e-09 Score=107.50 Aligned_cols=96 Identities=26% Similarity=0.271 Sum_probs=79.6
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCc
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~ 465 (878)
.|.+|.|+..+ ...++|+.|+|++|+|++..+..|+++++|+.|+|++|+|++..+..+..++ |+.|+|++|+
T Consensus 8 ~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 8 SGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 79999998543 2356899999999999977777789999999999999999966666678898 9999999999
Q ss_pred CCCCCchhhhhcccCCCcccccC
Q 002809 466 LNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 466 l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
|++..|..+..+++|+.|+++.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N 110 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTN 110 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCccCHhHhcCccCCCEEEcCCC
Confidence 99655566788888887766544
No 293
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.81 E-value=3.4e-09 Score=112.90 Aligned_cols=145 Identities=17% Similarity=0.148 Sum_probs=102.2
Q ss_pred eEEEEEecCCCCCchh--hhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCC
Q 002809 329 YSFSLYKTGNSTLPPI--INAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSS 406 (878)
Q Consensus 329 ~~~~l~~t~~s~lpp~--inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~ 406 (878)
..+.+..+....++.+ +..++.+.+..+. ...++ .+..+..|+.+....+.+.+.|.. . ....
T Consensus 44 ~~L~l~~~~i~~~~~l~~l~~L~~L~l~~n~-l~~~~-~l~~l~~L~~L~L~~n~l~~~~~~----~---------~~~l 108 (272)
T 3rfs_A 44 DQIIANNSDIKSVQGIQYLPNVRYLALGGNK-LHDIS-ALKELTNLTYLILTGNQLQSLPNG----V---------FDKL 108 (272)
T ss_dssp CEEECTTSCCCCCTTGGGCTTCCEEECTTSC-CCCCG-GGTTCTTCCEEECTTSCCCCCCTT----T---------TTTC
T ss_pred eeeeeCCCCcccccccccCCCCcEEECCCCC-CCCch-hhcCCCCCCEEECCCCccCccChh----H---------hcCC
Confidence 3444444445555433 4577778887765 33433 454554555444434444433321 0 1345
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSL 485 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l 485 (878)
++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..|..++.++ |+.|+|++|+|++..|..+..+++|+.|++
T Consensus 109 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 188 (272)
T 3rfs_A 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRL 188 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEEC
Confidence 7899999999999988888899999999999999999977777788999 999999999999777777788888887766
Q ss_pred ccC
Q 002809 486 SVG 488 (878)
Q Consensus 486 ~~~ 488 (878)
+.+
T Consensus 189 ~~N 191 (272)
T 3rfs_A 189 YQN 191 (272)
T ss_dssp CSS
T ss_pred CCC
Confidence 544
No 294
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.80 E-value=1.5e-09 Score=116.98 Aligned_cols=79 Identities=30% Similarity=0.350 Sum_probs=45.8
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCch-hhhhcccCCCc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPV-ELLERSKNGSL 483 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~-~l~~~~~l~~l 483 (878)
.++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+..++ |+.|+|++|+|+ .+|. .+..+++|+.|
T Consensus 99 l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTL 177 (290)
T ss_dssp CTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-CCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC-ccCHHHhcCcCCCCEE
Confidence 44566666666666655555566666666666666666644444455565 666666666666 3333 33445555544
Q ss_pred cc
Q 002809 484 SL 485 (878)
Q Consensus 484 ~l 485 (878)
++
T Consensus 178 ~L 179 (290)
T 1p9a_G 178 LL 179 (290)
T ss_dssp EC
T ss_pred EC
Confidence 43
No 295
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.78 E-value=1.7e-09 Score=109.48 Aligned_cols=77 Identities=23% Similarity=0.306 Sum_probs=35.2
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
++|+.|+|++|++++..|..|+.|++|+.|+|++|++++..|..++.++ |+.|+|++|++.+.+| .+..+++|+.|+
T Consensus 88 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 88 SNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLN 165 (197)
T ss_dssp TTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEE
T ss_pred CCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEE
Confidence 3444444444444444444444444444444444444444444444444 4444444444222343 344444444333
No 296
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.78 E-value=1.2e-09 Score=129.99 Aligned_cols=90 Identities=23% Similarity=0.245 Sum_probs=75.4
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcc-cCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERS-KNG 481 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~-~l~ 481 (878)
...++|+.|+|++|+|++.+|..|++|++|+.|+|++|++++.+|..++.++ |+.|+|++|+|+ .+|..+..++ +++
T Consensus 470 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~ 548 (606)
T 3vq2_A 470 ANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLA 548 (606)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCC
T ss_pred ccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCc
Confidence 4557889999999999988888899999999999999999988888898888 999999999998 7888887776 366
Q ss_pred CcccccCCCCCCCCC
Q 002809 482 SLSLSVGGNPGLCSK 496 (878)
Q Consensus 482 ~l~l~~~~n~~lc~~ 496 (878)
.+...+|+..|..
T Consensus 549 --~l~l~~N~~~c~c 561 (606)
T 3vq2_A 549 --FFNLTNNSVACIC 561 (606)
T ss_dssp --EEECCSCCCCCSS
T ss_pred --EEEccCCCcccCC
Confidence 4567788888763
No 297
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.78 E-value=3.1e-09 Score=104.40 Aligned_cols=85 Identities=22% Similarity=0.241 Sum_probs=72.1
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCc-CCccCCCCc-ceEEEecCCcCCCCCc---hhhhhcc
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGS-VPDFLSKLP-LRTLNLQGNKLNGSVP---VELLERS 478 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~-iP~~~~~l~-L~~L~ls~N~l~g~iP---~~l~~~~ 478 (878)
...++|+.|+|++|+|++.+|..+.++++|+.|+|++|+|++. .+..+..++ |+.|+|++|++++..+ ..+..++
T Consensus 68 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~ 147 (168)
T 2ell_A 68 PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLP 147 (168)
T ss_dssp CCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCS
T ss_pred ccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCc
Confidence 4567899999999999988999999999999999999999963 237889999 9999999999995544 3788889
Q ss_pred cCCCcccccC
Q 002809 479 KNGSLSLSVG 488 (878)
Q Consensus 479 ~l~~l~l~~~ 488 (878)
+|+.|+++.+
T Consensus 148 ~L~~L~l~~n 157 (168)
T 2ell_A 148 QLTYLDGYDR 157 (168)
T ss_dssp SCCEETTEET
T ss_pred cCcEecCCCC
Confidence 8887766544
No 298
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=98.77 E-value=6.6e-09 Score=107.20 Aligned_cols=95 Identities=25% Similarity=0.270 Sum_probs=76.2
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCc
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~ 465 (878)
.|..|.|+... ..++.|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..++ |+.|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 12 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp ETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred CCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 68889998542 2345789999999999977777899999999999999999988888899998 9999999999
Q ss_pred CCCCCchh-hhhcccCCCcccccC
Q 002809 466 LNGSVPVE-LLERSKNGSLSLSVG 488 (878)
Q Consensus 466 l~g~iP~~-l~~~~~l~~l~l~~~ 488 (878)
|+ .+|.. +..+++|+.|+++.+
T Consensus 92 l~-~l~~~~f~~l~~L~~L~L~~N 114 (220)
T 2v9t_B 92 IT-ELPKSLFEGLFSLQLLLLNAN 114 (220)
T ss_dssp CC-CCCTTTTTTCTTCCEEECCSS
T ss_pred CC-ccCHhHccCCCCCCEEECCCC
Confidence 99 45554 567888886666544
No 299
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.77 E-value=5.3e-09 Score=124.38 Aligned_cols=91 Identities=26% Similarity=0.237 Sum_probs=81.4
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhc-ccCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLER-SKNG 481 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~-~~l~ 481 (878)
...++|+.|+|++|+|++.+|..|++|++|+.|+|++|+|++..|..+..++ |+.|+|++|+|++..|..+..+ ++|+
T Consensus 491 ~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~ 570 (635)
T 4g8a_A 491 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 570 (635)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCC
T ss_pred hhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCC
Confidence 4567899999999999999999999999999999999999988888899999 9999999999999999988887 4566
Q ss_pred CcccccCCCCCCCCC
Q 002809 482 SLSLSVGGNPGLCSK 496 (878)
Q Consensus 482 ~l~l~~~~n~~lc~~ 496 (878)
.+..++||..|.+
T Consensus 571 --~L~L~~Np~~C~C 583 (635)
T 4g8a_A 571 --FLNLTQNDFACTC 583 (635)
T ss_dssp --EEECTTCCBCCSG
T ss_pred --EEEeeCCCCcccC
Confidence 4677899999873
No 300
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.75 E-value=5.8e-09 Score=110.95 Aligned_cols=146 Identities=21% Similarity=0.238 Sum_probs=97.8
Q ss_pred eEEEEEecCCCCCchh----hhhhhhheeccccccccccchH-HHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCC
Q 002809 329 YSFSLYKTGNSTLPPI----INAIEVYSVKEFLQLQTEQIDV-DAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGD 403 (878)
Q Consensus 329 ~~~~l~~t~~s~lpp~----inalEi~~l~~~~~~~t~~~d~-~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~ 403 (878)
..+.+..+..+.+|+. +..|+.+.+..+. .+.+|.+. ..+..|+.+....+...+.|-. . .
T Consensus 40 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~----~---------~ 105 (270)
T 2o6q_A 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNK-LQTLPAGIFKELKNLETLWVTDNKLQALPIG----V---------F 105 (270)
T ss_dssp SEEECCSSCCSCCCTTSSSSCTTCCEEECCSSC-CSCCCTTTTSSCTTCCEEECCSSCCCCCCTT----T---------T
T ss_pred CEEECcCCCCCeeCHHHhcCCCCCCEEECCCCc-cCeeChhhhcCCCCCCEEECCCCcCCcCCHh----H---------c
Confidence 3455555555566541 3456666665544 44555443 3344444443333333332210 0 1
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
...++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..+..+..++ |+.|+|++|++++..|..+..+++|+.
T Consensus 106 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 185 (270)
T 2o6q_A 106 DQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKT 185 (270)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred ccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCE
Confidence 3456899999999999988888899999999999999999965556688888 999999999999766666888888887
Q ss_pred cccccC
Q 002809 483 LSLSVG 488 (878)
Q Consensus 483 l~l~~~ 488 (878)
|+++.+
T Consensus 186 L~L~~N 191 (270)
T 2o6q_A 186 LKLDNN 191 (270)
T ss_dssp EECCSS
T ss_pred EECCCC
Confidence 666543
No 301
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.74 E-value=4.2e-09 Score=120.44 Aligned_cols=135 Identities=19% Similarity=0.128 Sum_probs=96.2
Q ss_pred hhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCCcEEEEEecCCCccccchhh
Q 002809 347 AIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSPRITYLNLSSSGLKGDITSY 426 (878)
Q Consensus 347 alEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~~l~~l~l~~n~l~g~ip~~ 426 (878)
.++.+.+..+...+..|..+..+.+|+.+....+...+.+.. .+ ...++|+.|+|++|+|++..|..
T Consensus 276 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~----~~---------~~l~~L~~L~Ls~N~l~~~~~~~ 342 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDN----AF---------WGLTHLLKLNLSQNFLGSIDSRM 342 (455)
T ss_dssp CCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT----TT---------TTCTTCCEEECCSSCCCEECGGG
T ss_pred CceEEEecCccccccchhhcccCCCCCEEECCCCcccccChh----Hh---------cCcccCCEEECCCCccCCcChhH
Confidence 455555555543333444444444444444333333322110 11 34578999999999999888999
Q ss_pred hhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcccccCCCCCCCCC
Q 002809 427 VSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLSVGGNPGLCSK 496 (878)
Q Consensus 427 ~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~~~~n~~lc~~ 496 (878)
|+++++|+.|+|++|++++..|..+..++ |+.|+|++|+|++..+..+..+++|+. +...+|+..|..
T Consensus 343 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~--L~l~~N~l~~~~ 411 (455)
T 3v47_A 343 FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQK--IWLHTNPWDCSC 411 (455)
T ss_dssp GTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE--EECCSSCBCCCT
T ss_pred hcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccE--EEccCCCcccCC
Confidence 99999999999999999998899999999 999999999999655556678888874 556778877653
No 302
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.74 E-value=1.3e-08 Score=100.88 Aligned_cols=89 Identities=25% Similarity=0.262 Sum_probs=72.6
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|+|++..+..++++++|+.|+|++|+|++..|..+..++ |+.|+|++|+|++..+..+..+++|+.
T Consensus 50 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~- 128 (177)
T 2o6r_A 50 KLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQK- 128 (177)
T ss_dssp TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-
T ss_pred CcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCE-
Confidence 356899999999999976677789999999999999999977777788998 999999999999544444577887775
Q ss_pred ccccCCCCCCCC
Q 002809 484 SLSVGGNPGLCS 495 (878)
Q Consensus 484 ~l~~~~n~~lc~ 495 (878)
+.+.+|+..|.
T Consensus 129 -L~l~~N~~~~~ 139 (177)
T 2o6r_A 129 -IWLHTNPWDCS 139 (177)
T ss_dssp -EECCSSCBCCC
T ss_pred -EEecCCCeecc
Confidence 45567777654
No 303
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.74 E-value=1.8e-09 Score=120.12 Aligned_cols=150 Identities=20% Similarity=0.150 Sum_probs=91.5
Q ss_pred EEEEecCCCCCch-----hhhhhhhheeccccccccccc-hHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCC
Q 002809 331 FSLYKTGNSTLPP-----IINAIEVYSVKEFLQLQTEQI-DVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDS 404 (878)
Q Consensus 331 ~~l~~t~~s~lpp-----~inalEi~~l~~~~~~~t~~~-d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~ 404 (878)
+.|..+..+.+|+ .+..|+.+.+..+. ++.++. .+..|.+|+.+....+.....|-. .+ .
T Consensus 44 L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~-i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~----~~---------~ 109 (361)
T 2xot_A 44 LDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNH-LNFISSEAFVPVPNLRYLDLSSNHLHTLDEF----LF---------S 109 (361)
T ss_dssp EECCSSCCCEECTTSSSSCCTTCCEEECCSSC-CCEECTTTTTTCTTCCEEECCSSCCCEECTT----TT---------T
T ss_pred EECCCCCCCccChhhhhhcccccCEEECCCCc-CCccChhhccCCCCCCEEECCCCcCCcCCHH----Hh---------C
Confidence 4444444444444 23455666665544 334432 344444444444333333222210 01 3
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccC----CCCc-ceEEEecCCcCCCCCchhhhhccc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFL----SKLP-LRTLNLQGNKLNGSVPVELLERSK 479 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~----~~l~-L~~L~ls~N~l~g~iP~~l~~~~~ 479 (878)
..++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++ +|..+ ..++ |+.|+|++|+|++..+..+..++.
T Consensus 110 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~ 188 (361)
T 2xot_A 110 DLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPA 188 (361)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCH
T ss_pred CCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccH
Confidence 45688889999999987778888999999999999999984 66543 5677 899999999998544456666654
Q ss_pred CCCcccccCCCCCCCC
Q 002809 480 NGSLSLSVGGNPGLCS 495 (878)
Q Consensus 480 l~~l~l~~~~n~~lc~ 495 (878)
+..-.+.+.+||..|.
T Consensus 189 ~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 189 WVKNGLYLHNNPLECD 204 (361)
T ss_dssp HHHTTEECCSSCEECC
T ss_pred hhcceEEecCCCccCC
Confidence 3112467788888876
No 304
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=98.74 E-value=7.2e-09 Score=106.88 Aligned_cols=84 Identities=19% Similarity=0.207 Sum_probs=59.9
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..|..+..++ |+.|+|++|+|++..|..+..+++|+.|
T Consensus 55 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp GCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred cCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 345677777777777766666777777777777777777766666677777 7777777777776667777777777765
Q ss_pred ccccC
Q 002809 484 SLSVG 488 (878)
Q Consensus 484 ~l~~~ 488 (878)
+++.+
T Consensus 135 ~L~~N 139 (220)
T 2v70_A 135 SLYDN 139 (220)
T ss_dssp ECTTS
T ss_pred ECCCC
Confidence 55443
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.72 E-value=1.9e-09 Score=116.70 Aligned_cols=90 Identities=26% Similarity=0.243 Sum_probs=73.1
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcc-cCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERS-KNG 481 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~-~l~ 481 (878)
...++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..+..++ |+.|+|++|++++..|..+..++ .++
T Consensus 172 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~ 251 (306)
T 2z66_A 172 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 251 (306)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCC
T ss_pred hhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCC
Confidence 3457889999999999888888899999999999999999876666788888 99999999999988888888774 666
Q ss_pred CcccccCCCCCCCC
Q 002809 482 SLSLSVGGNPGLCS 495 (878)
Q Consensus 482 ~l~l~~~~n~~lc~ 495 (878)
. +...+|+..|.
T Consensus 252 ~--L~L~~N~~~~~ 263 (306)
T 2z66_A 252 F--LNLTQNDFACT 263 (306)
T ss_dssp E--EECTTCCEECS
T ss_pred E--EEccCCCeecc
Confidence 3 55567777664
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.72 E-value=5.7e-09 Score=111.79 Aligned_cols=146 Identities=15% Similarity=0.111 Sum_probs=97.6
Q ss_pred EEEEEecCCCCCch-h---hhhhhhheeccccccccc-cchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCC
Q 002809 330 SFSLYKTGNSTLPP-I---INAIEVYSVKEFLQLQTE-QIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDS 404 (878)
Q Consensus 330 ~~~l~~t~~s~lpp-~---inalEi~~l~~~~~~~t~-~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~ 404 (878)
.+.+..+....++| . +..++.+.+..+...+.+ |..+..+.+|+.+....+.+.+.+-. . ..
T Consensus 60 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~----~---------~~ 126 (285)
T 1ozn_A 60 ILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPG----L---------FR 126 (285)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT----T---------TT
T ss_pred EEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHh----H---------hh
Confidence 44444444444432 2 346777777766434444 44555555555544333333332210 0 13
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|+|++..+..|+++++|+.|+|++|+|++..+..+..++ |+.|+|++|++++..|..+..+++|+.|
T Consensus 127 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 206 (285)
T 1ozn_A 127 GLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 206 (285)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEe
Confidence 457899999999999876677788999999999999999865556688888 9999999999998888888888888866
Q ss_pred ccccC
Q 002809 484 SLSVG 488 (878)
Q Consensus 484 ~l~~~ 488 (878)
+++.+
T Consensus 207 ~l~~n 211 (285)
T 1ozn_A 207 YLFAN 211 (285)
T ss_dssp ECCSS
T ss_pred eCCCC
Confidence 65543
No 307
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.71 E-value=3.8e-09 Score=130.91 Aligned_cols=85 Identities=25% Similarity=0.273 Sum_probs=71.4
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
...++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+. + |+.|+|++|+|+|.+|..+.++ .
T Consensus 477 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L---~- 550 (844)
T 3j0a_A 477 EGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSL---S- 550 (844)
T ss_dssp SCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSC---C-
T ss_pred cCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCc---C-
Confidence 4568999999999999999999999999999999999999976666555 5 9999999999999999876543 3
Q ss_pred cccccCCCCCCCC
Q 002809 483 LSLSVGGNPGLCS 495 (878)
Q Consensus 483 l~l~~~~n~~lc~ 495 (878)
.+.+.+||..|.
T Consensus 551 -~l~l~~Np~~C~ 562 (844)
T 3j0a_A 551 -VLDITHNKFICE 562 (844)
T ss_dssp -EEEEEEECCCCS
T ss_pred -EEEecCCCcccc
Confidence 456778888774
No 308
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.70 E-value=4.9e-09 Score=116.64 Aligned_cols=143 Identities=22% Similarity=0.208 Sum_probs=95.8
Q ss_pred EEEEEecCCCCCchhh-hhhhhheeccccccccccchH-H-HHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCC
Q 002809 330 SFSLYKTGNSTLPPII-NAIEVYSVKEFLQLQTEQIDV-D-AITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSS 406 (878)
Q Consensus 330 ~~~l~~t~~s~lpp~i-nalEi~~l~~~~~~~t~~~d~-~-al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~ 406 (878)
.+.+..+....+|..+ ..++.+.+..+. ++.++.+. . .+..|+.+....+...+-|-. . ....
T Consensus 22 ~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~-l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~----~---------~~~l 87 (361)
T 2xot_A 22 ILSCSKQQLPNVPQSLPSYTALLDLSHNN-LSRLRAEWTPTRLTNLHSLLLSHNHLNFISSE----A---------FVPV 87 (361)
T ss_dssp EEECCSSCCSSCCSSCCTTCSEEECCSSC-CCEECTTSSSSCCTTCCEEECCSSCCCEECTT----T---------TTTC
T ss_pred EEEeCCCCcCccCccCCCCCCEEECCCCC-CCccChhhhhhcccccCEEECCCCcCCccChh----h---------ccCC
Confidence 4555556667777543 357788888765 55555543 2 455555544444444332210 1 1345
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhh----hhcccCC
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVEL----LERSKNG 481 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l----~~~~~l~ 481 (878)
++|+.|+|++|+|++..+..|.+|++|+.|+|++|+|++..|..|..++ |+.|+|++|+|+ .+|..+ ..+++|+
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~ 166 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLM 166 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCC
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCC
Confidence 6888899999998876677788899999999999999877788888888 999999999988 466655 4577777
Q ss_pred Cccccc
Q 002809 482 SLSLSV 487 (878)
Q Consensus 482 ~l~l~~ 487 (878)
.|+++.
T Consensus 167 ~L~L~~ 172 (361)
T 2xot_A 167 LLDLSS 172 (361)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 655543
No 309
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.70 E-value=8.7e-09 Score=104.15 Aligned_cols=79 Identities=24% Similarity=0.298 Sum_probs=69.1
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|++++.+|..++++++|+.|+|++|++.+.+| .+..++ |+.|+|++|++++ +| .+..+++|+.|
T Consensus 110 ~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L 186 (197)
T 4ezg_A 110 GLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQL 186 (197)
T ss_dssp TCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEE
T ss_pred CCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEE
Confidence 45789999999999999999999999999999999999555787 688899 9999999999995 55 78888888866
Q ss_pred ccc
Q 002809 484 SLS 486 (878)
Q Consensus 484 ~l~ 486 (878)
+++
T Consensus 187 ~l~ 189 (197)
T 4ezg_A 187 YAF 189 (197)
T ss_dssp EEC
T ss_pred Eee
Confidence 554
No 310
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.70 E-value=1.5e-08 Score=109.80 Aligned_cols=184 Identities=21% Similarity=0.200 Sum_probs=121.8
Q ss_pred ccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhc-ccc--eeeeeecccCCC---cceeEeeeccC
Q 002809 572 RTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH-HRN--LTSLVGHCDEDN---QTALIYEFMAN 645 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~-H~n--Iv~l~g~~~~~~---~~~lV~Ey~~~ 645 (878)
+.++.|....||+.. ..+++|+.... .....+.+|.++|..+. +.. +.+++......+ ..++|||+++|
T Consensus 26 ~~~~~G~~n~v~~v~---~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN---RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST---TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC---CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 458899999999754 56888886432 34567899999999884 333 334454443333 35789999999
Q ss_pred CChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 002809 646 GNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNG------------------------------------------- 682 (878)
Q Consensus 646 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~------------------------------------------- 682 (878)
.+|.+... ..++..++..++.++++.|+.||+.
T Consensus 101 ~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 176 (304)
T 3sg8_A 101 VPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDF 176 (304)
T ss_dssp EECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred eECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHH
Confidence 88875332 2367788888999999999999961
Q ss_pred ------------CCCCeEecCCCCccEEEcC--CCcEEEeecCCccccccCCCCccccccc--------------CCCCc
Q 002809 683 ------------CKPPIVHRDVKSTNILLNE--KLQAKLADFGLSKSFATDANTHVSTVVA--------------GTPGY 734 (878)
Q Consensus 683 ------------~~~~ivHrDLKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~~~~--------------gt~~Y 734 (878)
..+.++|+|+++.||++++ ...+.|+||+.+..-... ........ ...+.
T Consensus 177 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~--~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 177 YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD--NDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT--HHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH--HHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1245899999999999998 456899999987643111 00000000 00011
Q ss_pred cC-ccccccCCCCCccchhhHHHHHHHHHhCCCCC
Q 002809 735 LD-PEYYTSNRLTEKSDVYSFGVVILEIITCKPAI 768 (878)
Q Consensus 735 ~A-PE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~ 768 (878)
.. |+.... .....+.|++|.+++++.+|+.+|
T Consensus 255 ~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11 222111 112258899999999999998765
No 311
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.69 E-value=1.4e-08 Score=97.64 Aligned_cols=78 Identities=28% Similarity=0.373 Sum_probs=49.7
Q ss_pred CcEEEEEecCCCcc-ccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 407 PRITYLNLSSSGLK-GDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 407 ~~l~~l~l~~n~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
++|+.|+|++|+++ |.+|..++.+++|+.|+|++|++++. ..++.++ |+.|+|++|++++.+|..+..+++++.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666666 66666666666666666666666644 4566666 66666666666665666666666666544
Q ss_pred cc
Q 002809 485 LS 486 (878)
Q Consensus 485 l~ 486 (878)
++
T Consensus 95 ls 96 (149)
T 2je0_A 95 LS 96 (149)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 312
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.68 E-value=5.1e-09 Score=119.76 Aligned_cols=142 Identities=15% Similarity=0.141 Sum_probs=93.6
Q ss_pred EEecCCCCCchhhhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCC--CCCCCCCcccceecCCCCCCCCcEE
Q 002809 333 LYKTGNSTLPPIINAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGD--PCAPLAYWWDGLNCSYGDSSSPRIT 410 (878)
Q Consensus 333 l~~t~~s~lpp~inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~--pc~~~~~~w~gv~C~~~~~~~~~l~ 410 (878)
........+|.+...++.+.+..+......|..+..|.+|+.+....+...+. |- .....++|+
T Consensus 17 c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~--------------~~~~l~~L~ 82 (455)
T 3v47_A 17 CINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNN--------------TFRGLSSLI 82 (455)
T ss_dssp CCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTT--------------TTTTCTTCC
T ss_pred cCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcc--------------cccccccCC
Confidence 33345555666446677777776653333355565555555444332222211 11 013456788
Q ss_pred EEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCcc--CCCCc-ceEEEecCCcCCCCCchh-hhhcccCCCcccc
Q 002809 411 YLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDF--LSKLP-LRTLNLQGNKLNGSVPVE-LLERSKNGSLSLS 486 (878)
Q Consensus 411 ~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~--~~~l~-L~~L~ls~N~l~g~iP~~-l~~~~~l~~l~l~ 486 (878)
.|+|++|++++..|..|++|++|+.|+|++|+++|.+|.. ++.++ |+.|+|++|++++..|.. +..+++|+.|+++
T Consensus 83 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~ 162 (455)
T 3v47_A 83 ILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLT 162 (455)
T ss_dssp EEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECT
T ss_pred EEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCC
Confidence 8888888888777888888888888888888888766655 77887 888888888888777776 6777877766665
Q ss_pred cC
Q 002809 487 VG 488 (878)
Q Consensus 487 ~~ 488 (878)
.+
T Consensus 163 ~n 164 (455)
T 3v47_A 163 FN 164 (455)
T ss_dssp TC
T ss_pred CC
Confidence 44
No 313
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.68 E-value=9.6e-09 Score=122.13 Aligned_cols=137 Identities=17% Similarity=0.083 Sum_probs=85.2
Q ss_pred CCCCCchhhh-hhhhheecccccccccc-chHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCCcEEEEEe
Q 002809 337 GNSTLPPIIN-AIEVYSVKEFLQLQTEQ-IDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSPRITYLNL 414 (878)
Q Consensus 337 ~~s~lpp~in-alEi~~l~~~~~~~t~~-~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~~l~~l~l 414 (878)
..+.+|+-|. .++.+.|..|. ++.+| .++..|.+|+.+....+...+-|-. . -...++|+.|+|
T Consensus 42 ~l~~vP~~lp~~~~~LdLs~N~-i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~----~---------f~~L~~L~~L~L 107 (635)
T 4g8a_A 42 NFYKIPDNLPFSTKNLDLSFNP-LRHLGSYSFFSFPELQVLDLSRCEIQTIEDG----A---------YQSLSHLSTLIL 107 (635)
T ss_dssp CCSSCCSSSCTTCCEEECTTSC-CCEECTTTTTTCTTCCEEECTTCCCCEECTT----T---------TTTCTTCCEEEC
T ss_pred CcCccCCCCCcCCCEEEeeCCC-CCCCCHHHHhCCCCCCEEECCCCcCCCcChh----H---------hcCCCCCCEEEc
Confidence 3345555443 56667776654 44444 3455555555544433333322110 0 134567888888
Q ss_pred cCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCC-CCchhhhhcccCCCccccc
Q 002809 415 SSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNG-SVPVELLERSKNGSLSLSV 487 (878)
Q Consensus 415 ~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g-~iP~~l~~~~~l~~l~l~~ 487 (878)
++|+|++..|..|.+|++|++|+|++|+|++..|..|+.++ |+.|+|++|++++ .+|..+..++.|+.|+++.
T Consensus 108 s~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~ 182 (635)
T 4g8a_A 108 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 182 (635)
T ss_dssp TTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCS
T ss_pred cCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccC
Confidence 88888765556678888888888888888865556677777 8888888888765 4677777777777655543
No 314
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.67 E-value=1.1e-08 Score=108.90 Aligned_cols=84 Identities=24% Similarity=0.223 Sum_probs=66.5
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCC-CCchhhhhcccCCC
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNG-SVPVELLERSKNGS 482 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g-~iP~~l~~~~~l~~ 482 (878)
..++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..++.++ |+.|+|++|++++ .+|..+..+++|+.
T Consensus 74 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~ 153 (276)
T 2z62_A 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 153 (276)
T ss_dssp TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCE
T ss_pred CCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCE
Confidence 456788888888888877778888888888888888888876666788888 8888888888876 46888888888886
Q ss_pred cccccC
Q 002809 483 LSLSVG 488 (878)
Q Consensus 483 l~l~~~ 488 (878)
|+++.+
T Consensus 154 L~Ls~N 159 (276)
T 2z62_A 154 LDLSSN 159 (276)
T ss_dssp EECCSS
T ss_pred EECCCC
Confidence 655443
No 315
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.67 E-value=1.2e-08 Score=111.83 Aligned_cols=143 Identities=20% Similarity=0.170 Sum_probs=93.5
Q ss_pred eeEEEEEecCCCCCchh----hhhhhhheecccccc--ccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCC
Q 002809 328 NYSFSLYKTGNSTLPPI----INAIEVYSVKEFLQL--QTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSY 401 (878)
Q Consensus 328 ~~~~~l~~t~~s~lpp~----inalEi~~l~~~~~~--~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~ 401 (878)
...+.+..+..+.+++. +..++.+.+..+... +..+..+..+.+|+.+....+.+..-|-
T Consensus 123 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~-------------- 188 (330)
T 1xku_A 123 LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQ-------------- 188 (330)
T ss_dssp CCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCS--------------
T ss_pred ccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCc--------------
Confidence 44556666666666653 345666666654421 1334444444444443333333322221
Q ss_pred CCCCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccC
Q 002809 402 GDSSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKN 480 (878)
Q Consensus 402 ~~~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l 480 (878)
...++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+..++ |+.|+|++|+|+ .+|..+..++.|
T Consensus 189 --~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L 265 (330)
T 1xku_A 189 --GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYI 265 (330)
T ss_dssp --SCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSC
T ss_pred --cccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCc
Confidence 1225788888888888887788888888888888888888877777788887 888888888888 788888888877
Q ss_pred CCccccc
Q 002809 481 GSLSLSV 487 (878)
Q Consensus 481 ~~l~l~~ 487 (878)
+.|+++.
T Consensus 266 ~~L~l~~ 272 (330)
T 1xku_A 266 QVVYLHN 272 (330)
T ss_dssp CEEECCS
T ss_pred CEEECCC
Confidence 7655543
No 316
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.67 E-value=2.9e-09 Score=127.72 Aligned_cols=78 Identities=27% Similarity=0.420 Sum_probs=44.9
Q ss_pred CCcEEEEEecCCC-ccc-cchhhhhcc------CCCCEEeCcCCcccCcCCc--cCCCCc-ceEEEecCCcCCCCCchhh
Q 002809 406 SPRITYLNLSSSG-LKG-DITSYVSNL------TSLQFLDLSNNNLTGSVPD--FLSKLP-LRTLNLQGNKLNGSVPVEL 474 (878)
Q Consensus 406 ~~~l~~l~l~~n~-l~g-~ip~~~~~l------~~L~~L~Ls~N~l~g~iP~--~~~~l~-L~~L~ls~N~l~g~iP~~l 474 (878)
.++|+.|+|++|+ |+| .+|..+++| ++|+.|+|++|+|+ .||. .++.++ |+.|+|++|+++|.+| .+
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 4455666666665 555 556555555 56666666666665 5555 555555 6666666666665555 55
Q ss_pred hhcccCCCccc
Q 002809 475 LERSKNGSLSL 485 (878)
Q Consensus 475 ~~~~~l~~l~l 485 (878)
..+++|+.|++
T Consensus 350 ~~l~~L~~L~L 360 (636)
T 4eco_A 350 GSEIKLASLNL 360 (636)
T ss_dssp EEEEEESEEEC
T ss_pred CCCCCCCEEEC
Confidence 55555554443
No 317
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.65 E-value=9.7e-09 Score=122.05 Aligned_cols=76 Identities=18% Similarity=0.209 Sum_probs=41.5
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccC-cCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCC
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTG-SVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNG 481 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~ 481 (878)
.++|+.|+|++|++++..|..|++|++|+.|+|++|++++ .+|..+++++ |+.|+|++|++++..|..+..+.+++
T Consensus 103 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 180 (606)
T 3vq2_A 103 LTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENP 180 (606)
T ss_dssp CTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCT
T ss_pred cccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccc
Confidence 3455555555555554444555555555555555555553 4555555555 55555555555554455555554443
No 318
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.65 E-value=2e-08 Score=98.60 Aligned_cols=82 Identities=27% Similarity=0.376 Sum_probs=63.1
Q ss_pred CCCcEEEEEecCCCcc-ccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 405 SSPRITYLNLSSSGLK-GDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
.+++|+.|+|++|+|+ |.+|..+..+++|+.|+|++|+|++. ..++.++ |+.|+|++|++++.+|..+..+++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4467888888888887 78888888888888888888888854 6677777 888888888888777777777777776
Q ss_pred cccccC
Q 002809 483 LSLSVG 488 (878)
Q Consensus 483 l~l~~~ 488 (878)
|+++.+
T Consensus 100 L~Ls~N 105 (168)
T 2ell_A 100 LNLSGN 105 (168)
T ss_dssp EECBSS
T ss_pred EeccCC
Confidence 665544
No 319
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.64 E-value=2.2e-08 Score=118.08 Aligned_cols=81 Identities=28% Similarity=0.324 Sum_probs=72.1
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCC-chhhhhcccCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSV-PVELLERSKNG 481 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~i-P~~l~~~~~l~ 481 (878)
...++|+.|+|++|+|+ .||..|++|++|+.|+|++|+|++ || .++.++ |+.|+|++|+|++.+ |..++.+++|+
T Consensus 460 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~ 536 (567)
T 1dce_A 460 EQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLV 536 (567)
T ss_dssp GGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCC
T ss_pred cccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCC
Confidence 34568999999999999 999999999999999999999996 88 799999 999999999999877 99999999998
Q ss_pred Cccccc
Q 002809 482 SLSLSV 487 (878)
Q Consensus 482 ~l~l~~ 487 (878)
.|+++.
T Consensus 537 ~L~L~~ 542 (567)
T 1dce_A 537 LLNLQG 542 (567)
T ss_dssp EEECTT
T ss_pred EEEecC
Confidence 665543
No 320
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.63 E-value=7e-09 Score=123.27 Aligned_cols=88 Identities=30% Similarity=0.337 Sum_probs=77.0
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|++++..|..|+++++|+.|+|++|++++.+|..+..++ | .|+|++|++++..|..+..+++++
T Consensus 474 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~-- 550 (606)
T 3t6q_A 474 TLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQR-- 550 (606)
T ss_dssp GCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSS--
T ss_pred cCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCC--
Confidence 457899999999999988899999999999999999999999999999999 9 999999999988888888888887
Q ss_pred ccccCCCCCCCC
Q 002809 484 SLSVGGNPGLCS 495 (878)
Q Consensus 484 ~l~~~~n~~lc~ 495 (878)
.+.+.+||..|.
T Consensus 551 ~L~l~~N~~~c~ 562 (606)
T 3t6q_A 551 TINLRQNPLDCT 562 (606)
T ss_dssp EEECTTCCEECS
T ss_pred EEeCCCCCcccc
Confidence 456678888775
No 321
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.62 E-value=1.4e-08 Score=125.17 Aligned_cols=152 Identities=11% Similarity=0.130 Sum_probs=114.9
Q ss_pred CceeEEEEEecCCCC------------------Cchhh-----hhhhhheeccccccccccchHHHHHHHHHhhCCCCC-
Q 002809 326 GGNYSFSLYKTGNST------------------LPPII-----NAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKN- 381 (878)
Q Consensus 326 ~~~~~~~l~~t~~s~------------------lpp~i-----nalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~- 381 (878)
.....+.|..+..+. +|+.+ ..|+.+.+..+...+.+|..+..|.+|+.+....+.
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 456778888888877 77754 467777787776678888888777777666544443
Q ss_pred CCC--CCCCCCCCcccceecCCCCCCCCcEEEEEecCCCccccchh--hhhccCCCCEEeCcCCcccCcCCccCCCCc-c
Q 002809 382 WQG--DPCAPLAYWWDGLNCSYGDSSSPRITYLNLSSSGLKGDITS--YVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-L 456 (878)
Q Consensus 382 w~~--~pc~~~~~~w~gv~C~~~~~~~~~l~~l~l~~n~l~g~ip~--~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L 456 (878)
+.| -|- .|..+.- .....++|+.|+|++|+|+ .||. .|++|++|+.|+|++|+|+ .|| .++.++ |
T Consensus 528 lsg~~iP~-----~i~~L~~--~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L 597 (876)
T 4ecn_A 528 ISAAQLKA-----DWTRLAD--DEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKL 597 (876)
T ss_dssp SCHHHHHH-----HHHHHHH--CTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEE
T ss_pred cccccchH-----HHHhhhh--cccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcc
Confidence 443 221 1211110 1134568999999999999 8998 9999999999999999999 999 889999 9
Q ss_pred eEEEecCCcCCCCCchhhhhccc-CCCcccccC
Q 002809 457 RTLNLQGNKLNGSVPVELLERSK-NGSLSLSVG 488 (878)
Q Consensus 457 ~~L~ls~N~l~g~iP~~l~~~~~-l~~l~l~~~ 488 (878)
+.|+|++|+|+ .+|..+..+++ |+.|+++.+
T Consensus 598 ~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N 629 (876)
T 4ecn_A 598 TDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHN 629 (876)
T ss_dssp SEEECCSSCCS-CCCTTSCEECTTCCEEECCSS
T ss_pred eEEECcCCccc-cchHHHhhccccCCEEECcCC
Confidence 99999999999 89999999988 887666544
No 322
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.62 E-value=8.8e-09 Score=121.26 Aligned_cols=89 Identities=22% Similarity=0.319 Sum_probs=74.4
Q ss_pred CCCcEEEEEecCCCcc-ccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 405 SSPRITYLNLSSSGLK-GDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
..++|+.|+|++|.++ |.+|..++.+++|+.|+|++|++++.+|..+..++ |+.|+|++|+|++..|..+..+++|+.
T Consensus 443 ~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 522 (570)
T 2z63_A 443 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQK 522 (570)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcE
Confidence 4578899999999987 68898899999999999999999988888888888 999999999999877777888888774
Q ss_pred cccccCCCCCCCC
Q 002809 483 LSLSVGGNPGLCS 495 (878)
Q Consensus 483 l~l~~~~n~~lc~ 495 (878)
+.+.+|+..|.
T Consensus 523 --L~l~~N~~~~~ 533 (570)
T 2z63_A 523 --IWLHTNPWDCS 533 (570)
T ss_dssp --EECCSSCBCCC
T ss_pred --EEecCCcccCC
Confidence 55567777665
No 323
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.62 E-value=7.1e-09 Score=112.19 Aligned_cols=84 Identities=20% Similarity=0.270 Sum_probs=73.3
Q ss_pred CCCcEEEEEecCCCccc-cchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 405 SSPRITYLNLSSSGLKG-DITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
..++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++..|..+..++ |+.|+|++|++++..+..+..+++|+.
T Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 45789999999999998 6899999999999999999999988899999999 999999999999776778888888887
Q ss_pred cccccC
Q 002809 483 LSLSVG 488 (878)
Q Consensus 483 l~l~~~ 488 (878)
|+++.+
T Consensus 228 L~L~~N 233 (306)
T 2z66_A 228 LDYSLN 233 (306)
T ss_dssp EECTTS
T ss_pred eECCCC
Confidence 666544
No 324
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.61 E-value=2.2e-08 Score=117.37 Aligned_cols=95 Identities=20% Similarity=0.120 Sum_probs=80.3
Q ss_pred cccceecCCCC--------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecC
Q 002809 393 WWDGLNCSYGD--------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQG 463 (878)
Q Consensus 393 ~w~gv~C~~~~--------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~ 463 (878)
.|.|+ |+... ...++|+.|+|++|+|++..|..|+++++|++|+|++|++++..|..++.++ |++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 68887 75321 2346899999999999988889999999999999999999988888999999 99999999
Q ss_pred CcCCCCCchhhhhcccCCCcccccC
Q 002809 464 NKLNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 464 N~l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
|++++..|..++.+++|+.|+++.+
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n 108 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGN 108 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTC
T ss_pred CccCccCHHHhccCCCCcEEECCCC
Confidence 9999877777999998887776554
No 325
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.60 E-value=1.5e-08 Score=118.82 Aligned_cols=82 Identities=26% Similarity=0.293 Sum_probs=70.4
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
+++|+.|+|++|+|+|.+ +++++|+.|+|++|+|+ .||. .+.++ |+.|+|++|+|++.+|..+..+++++ .
T Consensus 430 ~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~--~ 501 (549)
T 2z81_A 430 PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQ--K 501 (549)
T ss_dssp CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCC--E
T ss_pred cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccC--E
Confidence 358899999999998753 58999999999999999 8997 46778 99999999999998888899999888 4
Q ss_pred cccCCCCCCCC
Q 002809 485 LSVGGNPGLCS 495 (878)
Q Consensus 485 l~~~~n~~lc~ 495 (878)
+..++|+..|.
T Consensus 502 L~l~~N~~~~~ 512 (549)
T 2z81_A 502 IWLHTNPWDCS 512 (549)
T ss_dssp EECCSSCBCCC
T ss_pred EEecCCCccCC
Confidence 56678888775
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.60 E-value=1.1e-08 Score=109.10 Aligned_cols=87 Identities=23% Similarity=0.311 Sum_probs=63.2
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccC-cCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTG-SVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
..++|+.|+|++|++++..+..++++++|+.|+|++|++++ .+|..++.++ |+.|+|++|++++..|..+..+.++..
T Consensus 98 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 177 (276)
T 2z62_A 98 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 177 (276)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT
T ss_pred CCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccc
Confidence 45678888888888886666678888888888888888876 4677788887 888888888888666667777776664
Q ss_pred c--ccccCCCC
Q 002809 483 L--SLSVGGNP 491 (878)
Q Consensus 483 l--~l~~~~n~ 491 (878)
+ .+..++|.
T Consensus 178 l~l~L~ls~n~ 188 (276)
T 2z62_A 178 LNLSLDLSLNP 188 (276)
T ss_dssp CCEEEECCSSC
T ss_pred cceeeecCCCc
Confidence 4 23444443
No 327
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.60 E-value=1.3e-08 Score=117.26 Aligned_cols=89 Identities=26% Similarity=0.286 Sum_probs=76.5
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|.|++..+..|.++++|+.|+|++|++++..|..+..++ |+.|+|++|+|++..+..+..+++|+.
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~- 324 (477)
T 2id5_A 246 HLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLET- 324 (477)
T ss_dssp TCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCE-
T ss_pred CccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCE-
Confidence 456899999999999988888899999999999999999998899999999 999999999999765666778888874
Q ss_pred ccccCCCCCCCC
Q 002809 484 SLSVGGNPGLCS 495 (878)
Q Consensus 484 ~l~~~~n~~lc~ 495 (878)
+.+.+|+..|.
T Consensus 325 -L~l~~N~l~c~ 335 (477)
T 2id5_A 325 -LILDSNPLACD 335 (477)
T ss_dssp -EECCSSCEECS
T ss_pred -EEccCCCccCc
Confidence 56678888775
No 328
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.60 E-value=7.8e-09 Score=125.67 Aligned_cols=114 Identities=16% Similarity=0.186 Sum_probs=85.2
Q ss_pred hhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCCcEEEEEecCCCccccchhh
Q 002809 347 AIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSPRITYLNLSSSGLKGDITSY 426 (878)
Q Consensus 347 alEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~~l~~l~l~~n~l~g~ip~~ 426 (878)
.|+.+.|..+. ...+|.++..|..|+.+....+.+..-|. .+ ..+++|+.|+|++|+|+ .||..
T Consensus 225 ~L~~L~Ls~n~-l~~l~~~~~~l~~L~~L~Ls~N~l~~lp~-----~~---------~~l~~L~~L~Ls~N~l~-~lp~~ 288 (727)
T 4b8c_D 225 LWHALDLSNLQ-IFNISANIFKYDFLTRLYLNGNSLTELPA-----EI---------KNLSNLRVLDLSHNRLT-SLPAE 288 (727)
T ss_dssp CCCEEECTTSC-CSCCCGGGGGCCSCSCCBCTTSCCSCCCG-----GG---------GGGTTCCEEECTTSCCS-SCCSS
T ss_pred CCcEEECCCCC-CCCCChhhcCCCCCCEEEeeCCcCcccCh-----hh---------hCCCCCCEEeCcCCcCC-ccChh
Confidence 45666666654 45677666655555555444444433232 11 34568999999999999 88999
Q ss_pred hhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhc
Q 002809 427 VSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLER 477 (878)
Q Consensus 427 ~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~ 477 (878)
|++|++|+.|+|++|+|+ .||..|+.|+ |+.|+|++|+|+|.+|..+..+
T Consensus 289 ~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 289 LGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp GGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred hcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 999999999999999997 8898899998 9999999999999888887654
No 329
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.58 E-value=1.5e-08 Score=119.49 Aligned_cols=77 Identities=32% Similarity=0.303 Sum_probs=65.5
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcC-CccCCCCc-ceEEEecCCcCCCCCchh---hhhccc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSV-PDFLSKLP-LRTLNLQGNKLNGSVPVE---LLERSK 479 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~i-P~~~~~l~-L~~L~ls~N~l~g~iP~~---l~~~~~ 479 (878)
.+++|+.|+|++|+|++ || .|++|++|+.|+|++|+|++.+ |..++.++ |+.|+|++|+|+|..|.. +..+++
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~ 561 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 561 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTT
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcc
Confidence 45789999999999997 78 8999999999999999999887 99999999 999999999999765532 223555
Q ss_pred CCCc
Q 002809 480 NGSL 483 (878)
Q Consensus 480 l~~l 483 (878)
|+.|
T Consensus 562 L~~L 565 (567)
T 1dce_A 562 VSSI 565 (567)
T ss_dssp CSEE
T ss_pred cCcc
Confidence 5544
No 330
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.57 E-value=2.1e-08 Score=115.55 Aligned_cols=146 Identities=18% Similarity=0.087 Sum_probs=92.1
Q ss_pred EEEEEecCCCCCchh----hhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCC
Q 002809 330 SFSLYKTGNSTLPPI----INAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSS 405 (878)
Q Consensus 330 ~~~l~~t~~s~lpp~----inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~ 405 (878)
.+.|..+....++|. +..|+.+.+..+......|..+..|.+|+.+....+.....|.. . ...
T Consensus 36 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~---------~~~ 102 (477)
T 2id5_A 36 LLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG----V---------FTG 102 (477)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT----S---------STT
T ss_pred EEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc----c---------ccC
Confidence 344444444444431 33566666665543333355555555555544433334333321 0 023
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
.++|+.|+|++|++++.+|..|.++++|+.|+|++|++++..|..+..++ |+.|+|++|++++..+..+..+++|+.|+
T Consensus 103 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 182 (477)
T 2id5_A 103 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 182 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEE
T ss_pred CCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEe
Confidence 56788888888888877788888888888888888888877777788887 88888888888865556677777777665
Q ss_pred cccC
Q 002809 485 LSVG 488 (878)
Q Consensus 485 l~~~ 488 (878)
++.+
T Consensus 183 l~~n 186 (477)
T 2id5_A 183 LRHL 186 (477)
T ss_dssp EESC
T ss_pred CCCC
Confidence 5443
No 331
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.56 E-value=7.4e-08 Score=95.49 Aligned_cols=73 Identities=22% Similarity=0.225 Sum_probs=60.6
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhc
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLER 477 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~ 477 (878)
...++|+.|+|++|+|++..+..|.+|++|+.|+|++|+|++..|..+..++ |+.|+|++|.|. ..|..+..+
T Consensus 54 ~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~-c~~~~~~~l 127 (174)
T 2r9u_A 54 DHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD-CECRDIMYL 127 (174)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC-TTBGGGHHH
T ss_pred cCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc-cccccHHHH
Confidence 3457899999999999976556679999999999999999965555699999 999999999999 455544433
No 332
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.56 E-value=1.4e-08 Score=111.41 Aligned_cols=79 Identities=27% Similarity=0.275 Sum_probs=55.6
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSL 485 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l 485 (878)
++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+..++ |+.|+|++|+|+ .+|..+..+++|+.|++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 4677777777777766667777777777777777777766666677776 777777777777 67777777776665544
Q ss_pred c
Q 002809 486 S 486 (878)
Q Consensus 486 ~ 486 (878)
+
T Consensus 272 ~ 272 (332)
T 2ft3_A 272 H 272 (332)
T ss_dssp C
T ss_pred C
Confidence 4
No 333
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.56 E-value=3.2e-08 Score=122.55 Aligned_cols=145 Identities=17% Similarity=0.091 Sum_probs=85.7
Q ss_pred eEEEEEecCCCCCch----hhhhhhhheeccccccccc-cchHHHHHHHHHhhCCCCCCCCC-CCCCCCCcccceecCCC
Q 002809 329 YSFSLYKTGNSTLPP----IINAIEVYSVKEFLQLQTE-QIDVDAITNIKATYGLKKNWQGD-PCAPLAYWWDGLNCSYG 402 (878)
Q Consensus 329 ~~~~l~~t~~s~lpp----~inalEi~~l~~~~~~~t~-~~d~~al~~lk~~~~~~~~w~~~-pc~~~~~~w~gv~C~~~ 402 (878)
..+.|..+..+.++| -+..|+.+.+..+.....+ |..+..|..|+.+....+...+. |- +
T Consensus 27 ~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~-----~--------- 92 (844)
T 3j0a_A 27 ERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD-----A--------- 92 (844)
T ss_dssp CEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT-----S---------
T ss_pred CEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh-----H---------
Confidence 455555555555533 1345666666655434444 44455555444443333333221 21 1
Q ss_pred CCCCCcEEEEEecCCCccccchhh--hhccCCCCEEeCcCCcccCcCC-ccCCCCc-ceEEEecCCcCCCCCchhhhhc-
Q 002809 403 DSSSPRITYLNLSSSGLKGDITSY--VSNLTSLQFLDLSNNNLTGSVP-DFLSKLP-LRTLNLQGNKLNGSVPVELLER- 477 (878)
Q Consensus 403 ~~~~~~l~~l~l~~n~l~g~ip~~--~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~- 477 (878)
....++|+.|+|++|+|++.+|.. |++|++|+.|+|++|++++..| ..+++++ |+.|+|++|++++..|..+..+
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 134556777777777777766665 7777777777777777776554 4577777 7777777777777777777666
Q ss_pred -ccCCCccccc
Q 002809 478 -SKNGSLSLSV 487 (878)
Q Consensus 478 -~~l~~l~l~~ 487 (878)
++|+.|.++.
T Consensus 173 ~~~L~~L~L~~ 183 (844)
T 3j0a_A 173 GKTLSFFSLAA 183 (844)
T ss_dssp HCSSCCCEECC
T ss_pred CCccceEECCC
Confidence 5566555543
No 334
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=98.54 E-value=7.2e-08 Score=95.13 Aligned_cols=67 Identities=22% Similarity=0.242 Sum_probs=59.6
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVP 471 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP 471 (878)
..++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+..++ |+.|+|++|.|++..+
T Consensus 52 ~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 52 RLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 457899999999999977777789999999999999999976667799999 9999999999996644
No 335
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.53 E-value=7.1e-08 Score=110.48 Aligned_cols=96 Identities=22% Similarity=0.191 Sum_probs=82.4
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCc
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~ 465 (878)
.|..|.|+... +.+++|+.|+|++|+|++..|..|++|++|+.|+|++|+|++..|..+..++ |+.|+|++|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 46789998542 3456899999999999998899999999999999999999988889999999 9999999999
Q ss_pred CCCCCchhhhhcccCCCcccccC
Q 002809 466 LNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 466 l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
|++..|..+..+++|+.|+++.+
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N 157 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNN 157 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSC
T ss_pred CCccChhhhcccCCCCEEECCCC
Confidence 99666666888898887766544
No 336
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.53 E-value=9.7e-09 Score=119.05 Aligned_cols=80 Identities=23% Similarity=0.254 Sum_probs=66.5
Q ss_pred CCcEEEEEecCCCccccchhhhh-ccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVS-NLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~-~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
.++|+.|+|++|+|+|.+|..+. +|++|+.|+|++|+|++. |. +..++ |+.|+|++|+|+| +|+.+..++.|..|
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L 219 (487)
T 3oja_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWI 219 (487)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEE
T ss_pred CCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEE
Confidence 56899999999999998998887 799999999999999966 43 33577 9999999999996 66678889988877
Q ss_pred ccccC
Q 002809 484 SLSVG 488 (878)
Q Consensus 484 ~l~~~ 488 (878)
+++.+
T Consensus 220 ~Ls~N 224 (487)
T 3oja_A 220 SLRNN 224 (487)
T ss_dssp ECTTS
T ss_pred EecCC
Confidence 66654
No 337
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.53 E-value=3.5e-08 Score=117.31 Aligned_cols=129 Identities=19% Similarity=0.200 Sum_probs=60.8
Q ss_pred ceeEEEEEecCCCCCchhh----hhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCC
Q 002809 327 GNYSFSLYKTGNSTLPPII----NAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYG 402 (878)
Q Consensus 327 ~~~~~~l~~t~~s~lpp~i----nalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~ 402 (878)
+...+.+..+....+|+.+ ..|+.+.+..+......|..+..+..|+.+....+...+.|.. .
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~--------- 118 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH----V--------- 118 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT----T---------
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH----H---------
Confidence 3344555555556666542 3566666655442222222444443333333322333222210 0
Q ss_pred CCCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCC
Q 002809 403 DSSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNG 468 (878)
Q Consensus 403 ~~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g 468 (878)
....++|+.|+|++|+|++..+..|++|++|+.|+|++|+|++..|..++.++ |+.|+|++|+|++
T Consensus 119 ~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 119 FQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred HcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 02234555555555555533333345555555555555555555555555555 5555555555554
No 338
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.53 E-value=3.5e-08 Score=119.98 Aligned_cols=79 Identities=28% Similarity=0.363 Sum_probs=68.1
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
.+++|+.|+|++|+|+ .||..|++|++|+.|+|++|+|+ .||..++.|+ |+.|+|++|+|+ .||.+++.+++|+.|
T Consensus 245 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L 321 (727)
T 4b8c_D 245 KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFL 321 (727)
T ss_dssp GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCE
T ss_pred CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEE
Confidence 3567889999999998 88989999999999999999999 8898898888 999999999987 889888888888866
Q ss_pred ccc
Q 002809 484 SLS 486 (878)
Q Consensus 484 ~l~ 486 (878)
+++
T Consensus 322 ~L~ 324 (727)
T 4b8c_D 322 GVE 324 (727)
T ss_dssp ECT
T ss_pred eCC
Confidence 554
No 339
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.51 E-value=3.5e-08 Score=107.27 Aligned_cols=175 Identities=21% Similarity=0.177 Sum_probs=101.0
Q ss_pred cCceeEEEEEECCccccCCCCCCccceeEEEcceeecCceeEEEEEecCCCCCchhh--------hhhhhheeccccccc
Q 002809 289 ANQSRQFNISLNGEHWYGPFSPNYLLTTTVFSPTALIGGNYSFSLYKTGNSTLPPII--------NAIEVYSVKEFLQLQ 360 (878)
Q Consensus 289 ~~~~R~F~i~in~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~t~~s~lpp~i--------nalEi~~l~~~~~~~ 360 (878)
-...|..++.-|.-.-. .|..+. .........+.|..+..+.+|+.+ ..++.+.+..+...+
T Consensus 94 l~~L~~L~L~~n~l~~~---~~~~~~-------~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~ 163 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGT---APPPLL-------EATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLN 163 (312)
T ss_dssp TSCCCEEEEEEEBCBSC---CCCCSS-------SCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCC
T ss_pred cCCccEEEccCCcccch---hHHHHH-------HhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCcc
Confidence 34678888877754311 121110 011234456777777777776543 355666666655332
Q ss_pred cccchHHHHHHHHHhhCCCCCCCCC---CCCCCCCcccceecCCCCCCCCcEEEEEecCCCccc--cchh-hhhccCCCC
Q 002809 361 TEQIDVDAITNIKATYGLKKNWQGD---PCAPLAYWWDGLNCSYGDSSSPRITYLNLSSSGLKG--DITS-YVSNLTSLQ 434 (878)
Q Consensus 361 t~~~d~~al~~lk~~~~~~~~w~~~---pc~~~~~~w~gv~C~~~~~~~~~l~~l~l~~n~l~g--~ip~-~~~~l~~L~ 434 (878)
..|..+..+.+|+.+....+...+. |- -.|. ...++|+.|+|++|+|++ .++. .+.++++|+
T Consensus 164 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---------~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~ 231 (312)
T 1wwl_A 164 FSCEQVRVFPALSTLDLSDNPELGERGLIS---------ALCP---LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQ 231 (312)
T ss_dssp CCTTTCCCCSSCCEEECCSCTTCHHHHHHH---------HSCT---TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCS
T ss_pred chHHHhccCCCCCEEECCCCCcCcchHHHH---------HHHh---ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCC
Confidence 2234444444444433222222111 00 0010 345688888888888883 3443 346778888
Q ss_pred EEeCcCCcccCcCC-ccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcccccC
Q 002809 435 FLDLSNNNLTGSVP-DFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 435 ~L~Ls~N~l~g~iP-~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
.|+|++|+|++.+| ..+..++ |+.|+|++|+|+ .+|..+. ++++.|+++.+
T Consensus 232 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N 284 (312)
T 1wwl_A 232 GLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYN 284 (312)
T ss_dssp EEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSS
T ss_pred EEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCC
Confidence 88888888888776 4455667 888888888888 7888776 55665555443
No 340
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.51 E-value=7.4e-08 Score=112.20 Aligned_cols=76 Identities=24% Similarity=0.240 Sum_probs=37.3
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCC-CCchhhhhcccCCCcc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNG-SVPVELLERSKNGSLS 484 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g-~iP~~l~~~~~l~~l~ 484 (878)
++|+.|+|++|+|++..|..|++|++|++|||++|+|+ .||.. .++ |++|+|++|++++ .+|..++.+++|+.|+
T Consensus 45 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 121 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLG 121 (520)
T ss_dssp TTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEE
T ss_pred ccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEE
Confidence 34555555555555444555555555555555555555 34443 344 5555555555544 3445555555444443
Q ss_pred c
Q 002809 485 L 485 (878)
Q Consensus 485 l 485 (878)
+
T Consensus 122 L 122 (520)
T 2z7x_B 122 L 122 (520)
T ss_dssp E
T ss_pred e
Confidence 3
No 341
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.51 E-value=4.1e-08 Score=114.35 Aligned_cols=84 Identities=31% Similarity=0.427 Sum_probs=62.9
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchh-hhhcccCCCc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVE-LLERSKNGSL 483 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~-l~~~~~l~~l 483 (878)
.++|+.|+|++|+|+|.+|..+. ++|+.|+|++|+|+ .||..+..++ |+.|+|++|+|+ .+|.. +..+++++.
T Consensus 398 l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~- 472 (520)
T 2z7x_B 398 TKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQK- 472 (520)
T ss_dssp CTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCE-
T ss_pred CccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccE-
Confidence 46788888888888877777665 67888888888888 7887777777 888888888888 67766 666776663
Q ss_pred ccccCCCCCCCC
Q 002809 484 SLSVGGNPGLCS 495 (878)
Q Consensus 484 ~l~~~~n~~lc~ 495 (878)
+...+|+..|.
T Consensus 473 -L~l~~N~~~c~ 483 (520)
T 2z7x_B 473 -IWLHTNPWDCS 483 (520)
T ss_dssp -EECCSSCBCCC
T ss_pred -EECcCCCCccc
Confidence 45567777665
No 342
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.50 E-value=9.2e-08 Score=105.71 Aligned_cols=95 Identities=23% Similarity=0.178 Sum_probs=78.1
Q ss_pred cccceecCCCC--------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecC
Q 002809 393 WWDGLNCSYGD--------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQG 463 (878)
Q Consensus 393 ~w~gv~C~~~~--------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~ 463 (878)
.|.|+ |+... ...++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..|..++.++ |+.|+|++
T Consensus 31 ~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 31 DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 68886 54221 2346899999999999976666999999999999999999988888899999 99999999
Q ss_pred CcCCCCCchhhhhcccCCCcccccC
Q 002809 464 NKLNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 464 N~l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
|++++..+..+..+++|+.|+++.+
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n 134 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGN 134 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTC
T ss_pred CcCCcCCHhHhCCCccCCEEECCCC
Confidence 9999544444888999987766544
No 343
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.49 E-value=4.8e-08 Score=114.95 Aligned_cols=67 Identities=21% Similarity=0.318 Sum_probs=33.1
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCcc-------eEEEecCCcCCCCCchhhhhccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLPL-------RTLNLQGNKLNGSVPVELLERSK 479 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~L-------~~L~ls~N~l~g~iP~~l~~~~~ 479 (878)
++|+.|+|++|+|++ ||. |+ ++|+.|+|++|+|+ .||. +.. .| +.|+|++|+|+ .||..+.++++
T Consensus 160 ~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~-~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~ 231 (571)
T 3cvr_A 160 TSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV-RNHHSEETEIFFRCRENRIT-HIPENILSLDP 231 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC---------CCEEEECCSSCCC-CCCGGGGGSCT
T ss_pred CCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH-hhhcccccceEEecCCCcce-ecCHHHhcCCC
Confidence 345555555555554 444 43 55555555555555 4544 322 23 55555555555 45555555554
Q ss_pred CC
Q 002809 480 NG 481 (878)
Q Consensus 480 l~ 481 (878)
|.
T Consensus 232 L~ 233 (571)
T 3cvr_A 232 TC 233 (571)
T ss_dssp TE
T ss_pred CC
Confidence 44
No 344
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.49 E-value=6.2e-08 Score=114.22 Aligned_cols=85 Identities=32% Similarity=0.439 Sum_probs=70.9
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchh-hhhcccCCC
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVE-LLERSKNGS 482 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~-l~~~~~l~~ 482 (878)
..++|+.|+|++|+|+|.+|..+. ++|+.|+|++|+|+ .||..+..++ |+.|+|++|+|+ .+|.. +..+++++.
T Consensus 426 ~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~ 501 (562)
T 3a79_B 426 WAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQY 501 (562)
T ss_dssp CCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCC
T ss_pred CcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCE
Confidence 356889999999999888887765 78999999999998 8998888888 999999999999 68877 777887774
Q ss_pred cccccCCCCCCCC
Q 002809 483 LSLSVGGNPGLCS 495 (878)
Q Consensus 483 l~l~~~~n~~lc~ 495 (878)
+...+|+..|.
T Consensus 502 --L~l~~N~~~c~ 512 (562)
T 3a79_B 502 --IWLHDNPWDCT 512 (562)
T ss_dssp --EECCSCCBCCC
T ss_pred --EEecCCCcCCC
Confidence 56678888775
No 345
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.49 E-value=5.2e-08 Score=115.74 Aligned_cols=137 Identities=18% Similarity=0.221 Sum_probs=81.6
Q ss_pred ceeEEEEEecCCCCCchh--hhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCC
Q 002809 327 GNYSFSLYKTGNSTLPPI--INAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDS 404 (878)
Q Consensus 327 ~~~~~~l~~t~~s~lpp~--inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~ 404 (878)
....+.|..+..+.+||+ +..|+.+.|..+. +..+| .+..|..|+.+....+...+.|. ..
T Consensus 66 ~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~-l~~l~-~l~~l~~L~~L~Ls~N~l~~l~~---------------l~ 128 (605)
T 1m9s_A 66 NVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENK-IKDLS-SLKDLKKLKSLSLEHNGISDING---------------LV 128 (605)
T ss_dssp TCCEEECTTSCCCCCGGGGGCTTCCEEECCSSC-CCCCT-TSTTCTTCCEEECTTSCCCCCGG---------------GG
T ss_pred CCCEEEeeCCCCCCChhhccCCCCCEEECcCCC-CCCCh-hhccCCCCCEEEecCCCCCCCcc---------------cc
Confidence 345566666666677663 2355666665543 33333 33333333333322222221110 12
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
.+++|+.|+|++|+|++. +.|+.|++|+.|+|++|+|++..| +..++ |+.|+|++|+|++ +| .+..+++|+.|
T Consensus 129 ~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L 202 (605)
T 1m9s_A 129 HLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVL 202 (605)
T ss_dssp GCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEE
T ss_pred CCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEE
Confidence 346778888888888754 567788888888888888886655 77777 8888888888875 43 57777777755
Q ss_pred ccc
Q 002809 484 SLS 486 (878)
Q Consensus 484 ~l~ 486 (878)
+++
T Consensus 203 ~L~ 205 (605)
T 1m9s_A 203 ELF 205 (605)
T ss_dssp ECC
T ss_pred Ecc
Confidence 544
No 346
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.49 E-value=3.8e-08 Score=116.85 Aligned_cols=75 Identities=35% Similarity=0.472 Sum_probs=41.7
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
+++|+.|+|++|+|++ + +.+..|++|+.|+|++|+|++. ..++.++ |+.|+|++|+|++..| +..+++|+.|+
T Consensus 108 l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 108 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 4456666666666654 2 3455666666666666666643 3455555 6666666666664444 55555555444
Q ss_pred cc
Q 002809 485 LS 486 (878)
Q Consensus 485 l~ 486 (878)
++
T Consensus 182 Ls 183 (605)
T 1m9s_A 182 LS 183 (605)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 347
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.48 E-value=5.4e-08 Score=104.78 Aligned_cols=138 Identities=19% Similarity=0.235 Sum_probs=90.7
Q ss_pred ceeEEEEEecCCCCCchh--hhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCC
Q 002809 327 GNYSFSLYKTGNSTLPPI--INAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDS 404 (878)
Q Consensus 327 ~~~~~~l~~t~~s~lpp~--inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~ 404 (878)
....+.+..+..+.++|+ +..|+.+.+..+. .+.++ .+..+..|+.+....+...+-+ + ..
T Consensus 69 ~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~-l~~~~-~l~~l~~L~~L~L~~n~i~~~~---------~------l~ 131 (291)
T 1h6t_A 69 NVTKLFLNGNKLTDIKPLANLKNLGWLFLDENK-VKDLS-SLKDLKKLKSLSLEHNGISDIN---------G------LV 131 (291)
T ss_dssp TCCEEECCSSCCCCCGGGTTCTTCCEEECCSSC-CCCGG-GGTTCTTCCEEECTTSCCCCCG---------G------GG
T ss_pred CCCEEEccCCccCCCcccccCCCCCEEECCCCc-CCCCh-hhccCCCCCEEECCCCcCCCCh---------h------hc
Confidence 345666777777777773 3356666666654 33433 2444444443332222222211 1 13
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|+|++. +.++++++|+.|+|++|++++..| +..++ |+.|+|++|++++ +|. +..+++|+.|
T Consensus 132 ~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L 205 (291)
T 1h6t_A 132 HLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVL 205 (291)
T ss_dssp GCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEE
T ss_pred CCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Chh-hccCCCCCEE
Confidence 456899999999999865 678999999999999999986555 88888 9999999999984 554 7778877766
Q ss_pred cccc
Q 002809 484 SLSV 487 (878)
Q Consensus 484 ~l~~ 487 (878)
+++.
T Consensus 206 ~l~~ 209 (291)
T 1h6t_A 206 ELFS 209 (291)
T ss_dssp EEEE
T ss_pred ECcC
Confidence 5543
No 348
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.48 E-value=6e-08 Score=115.33 Aligned_cols=130 Identities=15% Similarity=0.137 Sum_probs=88.5
Q ss_pred hhhhhhheeccccccccccchH-HHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCCcEEEEEecCCCccccc
Q 002809 345 INAIEVYSVKEFLQLQTEQIDV-DAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSPRITYLNLSSSGLKGDI 423 (878)
Q Consensus 345 inalEi~~l~~~~~~~t~~~d~-~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~~l~~l~l~~n~l~g~i 423 (878)
+..++++.+..+. .+.+|.++ ..+..|+.+....+...+.|.. .....++|+.|+|++|.|++..
T Consensus 50 l~~l~~l~l~~~~-l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~-------------~~~~l~~L~~L~L~~n~l~~~~ 115 (597)
T 3oja_B 50 LNNQKIVTFKNST-MRKLPAALLDSFRQVELLNLNDLQIEEIDTY-------------AFAYAHTIQKLYMGFNAIRYLP 115 (597)
T ss_dssp GCCCSEEEESSCE-ESEECTHHHHHCCCCSEEECTTSCCCEECTT-------------TTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCceEEEeeCCC-CCCcCHHHHccCCCCcEEECCCCCCCCCChH-------------HhcCCCCCCEEECCCCcCCCCC
Confidence 4566777776654 56677653 3344444443333333332210 1134568888888888888877
Q ss_pred hhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcccccC
Q 002809 424 TSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 424 p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
|..|++|++|+.|+|++|+|++..|..++.++ |+.|+|++|+|++..|..+..+++|+.|+++.+
T Consensus 116 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 181 (597)
T 3oja_B 116 PHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 181 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTS
T ss_pred HHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCC
Confidence 77888888888888888888854444568888 888888888888877878888888887666544
No 349
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.47 E-value=1.1e-07 Score=114.54 Aligned_cols=148 Identities=20% Similarity=0.094 Sum_probs=99.9
Q ss_pred eeEEEEEecCCCCCchh----hhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCC
Q 002809 328 NYSFSLYKTGNSTLPPI----INAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGD 403 (878)
Q Consensus 328 ~~~~~l~~t~~s~lpp~----inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~ 403 (878)
...+.|..+....+|+. +..++.+.+..+...+..|..+..|..|+.+....+...+-|.. . .
T Consensus 27 l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~----~---------~ 93 (680)
T 1ziw_A 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDK----T---------F 93 (680)
T ss_dssp CSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTT----T---------T
T ss_pred CcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChh----h---------h
Confidence 34566666666777663 34566666766553333355555555555554433444433321 0 1
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhh--hcccC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELL--ERSKN 480 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~--~~~~l 480 (878)
...++|+.|+|++|++++..|..|++|++|++|+|++|++++..|..++.++ |+.|+|++|++++..|..+. .+++|
T Consensus 94 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L 173 (680)
T 1ziw_A 94 AFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSL 173 (680)
T ss_dssp TTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEE
T ss_pred ccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccc
Confidence 3456889999999999877778899999999999999999988888888888 99999999999877776654 34667
Q ss_pred CCcccccC
Q 002809 481 GSLSLSVG 488 (878)
Q Consensus 481 ~~l~l~~~ 488 (878)
+.|+++.+
T Consensus 174 ~~L~L~~n 181 (680)
T 1ziw_A 174 KKLELSSN 181 (680)
T ss_dssp SEEECTTC
T ss_pred cEEECCCC
Confidence 76555443
No 350
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.46 E-value=1.2e-07 Score=112.70 Aligned_cols=95 Identities=22% Similarity=0.121 Sum_probs=75.0
Q ss_pred ccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcC
Q 002809 394 WDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKL 466 (878)
Q Consensus 394 w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l 466 (878)
+.-+.|+..+ ..+..++.|+|++|+|++..|..|++|++|++|+|++|++++..|..|+.++ |+.|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 3457786432 2446788889999988877788888888888888888888888888888888 88888888888
Q ss_pred CCCCchhhhhcccCCCcccccC
Q 002809 467 NGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 467 ~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
++..|..++.+++|+.|+++.+
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n 115 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQT 115 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTS
T ss_pred cccChhhhcccccccEeecccc
Confidence 8777888888887776665544
No 351
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.46 E-value=7e-08 Score=108.13 Aligned_cols=78 Identities=23% Similarity=0.264 Sum_probs=39.2
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCcc-CCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDF-LSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
++|+.|+|++|++++..|..|+++++|+.|+|++|+++ .+|.. ++.++ |+.|+|++|++++..|..+..+++|+.|+
T Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 93 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEE
T ss_pred CCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEE
Confidence 44555555555555444445555555555555555555 33332 34454 55555555555544444455555554443
Q ss_pred c
Q 002809 485 L 485 (878)
Q Consensus 485 l 485 (878)
+
T Consensus 172 l 172 (390)
T 3o6n_A 172 L 172 (390)
T ss_dssp C
T ss_pred C
Confidence 3
No 352
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.45 E-value=7.2e-08 Score=113.38 Aligned_cols=75 Identities=20% Similarity=0.287 Sum_probs=43.5
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccC-cCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccC
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTG-SVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKN 480 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l 480 (878)
.++|+.|+|++|++++..+..|++|++|++|+|++|++++ .+|..++.++ |+.|+|++|++++..|..+..+.++
T Consensus 99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 175 (570)
T 2z63_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (570)
T ss_dssp CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTC
T ss_pred ccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhcc
Confidence 4456666666666654333356666666666666666654 4566666665 6666666666665555555555554
No 353
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.45 E-value=7.4e-08 Score=113.52 Aligned_cols=146 Identities=16% Similarity=0.189 Sum_probs=95.3
Q ss_pred eEEEEEecCCCCCc--hhhhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCC
Q 002809 329 YSFSLYKTGNSTLP--PIINAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSS 406 (878)
Q Consensus 329 ~~~~l~~t~~s~lp--p~inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~ 406 (878)
..+.+..+....++ ..+..++.+.+..+...+..|..+..+.+|+.+....+.+.+-|..+ ......
T Consensus 334 ~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-----------~~~~~l 402 (562)
T 3a79_B 334 KMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVA-----------LMTKNM 402 (562)
T ss_dssp SEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHH-----------HTTTTC
T ss_pred eEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccch-----------hhhcCC
Confidence 34555555444433 34556777777766544445555555555544443333333211100 001345
Q ss_pred CcEEEEEecCCCccccchhh-hhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 407 PRITYLNLSSSGLKGDITSY-VSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~-~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
++|+.|+|++|++++.+|.. +..+++|+.|+|++|+|+|.+|..+. + |+.|+|++|+|+ .||..+..+++|+.|+
T Consensus 403 ~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~ 479 (562)
T 3a79_B 403 SSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELN 479 (562)
T ss_dssp TTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEE
T ss_pred CCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEE
Confidence 68888889888888867764 77888889999999988888887665 5 899999999998 7888888888888766
Q ss_pred cccC
Q 002809 485 LSVG 488 (878)
Q Consensus 485 l~~~ 488 (878)
++.+
T Consensus 480 L~~N 483 (562)
T 3a79_B 480 VASN 483 (562)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 6544
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.45 E-value=8e-08 Score=103.45 Aligned_cols=137 Identities=21% Similarity=0.238 Sum_probs=94.2
Q ss_pred eEEEEEecCCCCCchh--hhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCC
Q 002809 329 YSFSLYKTGNSTLPPI--INAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSS 406 (878)
Q Consensus 329 ~~~~l~~t~~s~lpp~--inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~ 406 (878)
..+.+..+....+|.+ +..++.+.+..+. .+.++. +..+.+|+.+....+...+-|. ....
T Consensus 49 ~~L~l~~~~i~~~~~~~~l~~L~~L~L~~n~-l~~~~~-l~~l~~L~~L~l~~n~l~~~~~---------------l~~l 111 (291)
T 1h6t_A 49 DQIIANNSDIKSVQGIQYLPNVTKLFLNGNK-LTDIKP-LANLKNLGWLFLDENKVKDLSS---------------LKDL 111 (291)
T ss_dssp CEEECTTSCCCCCTTGGGCTTCCEEECCSSC-CCCCGG-GTTCTTCCEEECCSSCCCCGGG---------------GTTC
T ss_pred cEEEccCCCcccChhHhcCCCCCEEEccCCc-cCCCcc-cccCCCCCEEECCCCcCCCChh---------------hccC
Confidence 3445545555555543 3467777777765 455554 5555555544433333322111 1456
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSL 485 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l 485 (878)
++|+.|+|++|+|++ + +.+.+|++|+.|+|++|++++. ..++.++ |+.|+|++|++++..| +..+++|+.|++
T Consensus 112 ~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L 185 (291)
T 1h6t_A 112 KKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185 (291)
T ss_dssp TTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEEC
Confidence 789999999999986 3 5799999999999999999964 5688888 9999999999996544 888888887766
Q ss_pred ccC
Q 002809 486 SVG 488 (878)
Q Consensus 486 ~~~ 488 (878)
+.+
T Consensus 186 ~~N 188 (291)
T 1h6t_A 186 SKN 188 (291)
T ss_dssp CSS
T ss_pred CCC
Confidence 544
No 355
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.44 E-value=4.9e-08 Score=106.12 Aligned_cols=79 Identities=23% Similarity=0.332 Sum_probs=43.4
Q ss_pred CCcEEEEEecCCCccccchhhhhcc-----CCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCC--Cchhh--h
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNL-----TSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGS--VPVEL--L 475 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l-----~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~--iP~~l--~ 475 (878)
.++|+.|+|++|+|++. |..++++ ++|+.|+|++|++++..|..++.++ |+.|+|++|++.|. +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 34556666666666554 5555555 5666666666666555555555555 66666666665554 23333 4
Q ss_pred hcccCCCccc
Q 002809 476 ERSKNGSLSL 485 (878)
Q Consensus 476 ~~~~l~~l~l 485 (878)
.+++|+.|++
T Consensus 199 ~l~~L~~L~L 208 (312)
T 1wwl_A 199 KFPTLQVLAL 208 (312)
T ss_dssp SCTTCCEEEC
T ss_pred cCCCCCEEEC
Confidence 4555554433
No 356
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.43 E-value=2.5e-08 Score=108.72 Aligned_cols=143 Identities=13% Similarity=0.127 Sum_probs=92.2
Q ss_pred ceeEEEEEecCCCCCchh----hhhhhhheeccccccccccchHH-HHHHHHHhhCCCCCCCCCCCCCCCCcccceecCC
Q 002809 327 GNYSFSLYKTGNSTLPPI----INAIEVYSVKEFLQLQTEQIDVD-AITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSY 401 (878)
Q Consensus 327 ~~~~~~l~~t~~s~lpp~----inalEi~~l~~~~~~~t~~~d~~-al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~ 401 (878)
....+.+..+..+.++|. +..++.+.+..+......+..+. .+..|+.+....+...+.|.
T Consensus 121 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-------------- 186 (317)
T 3o53_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG-------------- 186 (317)
T ss_dssp SCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--------------
T ss_pred CCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--------------
Confidence 345666777777777653 34667777766553322333332 33344333322222221111
Q ss_pred CCCCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCC-CCCchhhhhccc
Q 002809 402 GDSSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLN-GSVPVELLERSK 479 (878)
Q Consensus 402 ~~~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~-g~iP~~l~~~~~ 479 (878)
....++|+.|+|++|+|+ .+|+.+..+++|+.|+|++|+|+ .+|..+..++ |+.|+|++|.++ +.+|..+..++.
T Consensus 187 -~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~ 263 (317)
T 3o53_A 187 -QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQR 263 (317)
T ss_dssp -CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHH
T ss_pred -ccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhcccc
Confidence 123567888888888888 45666888888888888888888 6788888888 888888888888 777877777777
Q ss_pred CCCcccc
Q 002809 480 NGSLSLS 486 (878)
Q Consensus 480 l~~l~l~ 486 (878)
++.+.+.
T Consensus 264 L~~l~l~ 270 (317)
T 3o53_A 264 VQTVAKQ 270 (317)
T ss_dssp HHHHHHH
T ss_pred ceEEECC
Confidence 6655543
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.43 E-value=7.7e-08 Score=102.01 Aligned_cols=74 Identities=26% Similarity=0.402 Sum_probs=60.3
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSL 485 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l 485 (878)
++|+.|+|++|+|++ +| .++++++|+.|+|++|+|++ +| .++.++ |+.|+|++|++++. ..+..+++|+.|++
T Consensus 106 ~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l 179 (263)
T 1xeu_A 106 ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDL 179 (263)
T ss_dssp SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEE
T ss_pred CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeC
Confidence 578999999999986 44 68999999999999999985 45 578888 99999999999865 66777777775554
Q ss_pred c
Q 002809 486 S 486 (878)
Q Consensus 486 ~ 486 (878)
+
T Consensus 180 ~ 180 (263)
T 1xeu_A 180 T 180 (263)
T ss_dssp E
T ss_pred C
Confidence 3
No 358
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.43 E-value=8.7e-08 Score=115.51 Aligned_cols=143 Identities=17% Similarity=0.078 Sum_probs=104.4
Q ss_pred EEEecCCCCCchhh-hhhhhheecccccccccc-chHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCCcE
Q 002809 332 SLYKTGNSTLPPII-NAIEVYSVKEFLQLQTEQ-IDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSPRI 409 (878)
Q Consensus 332 ~l~~t~~s~lpp~i-nalEi~~l~~~~~~~t~~-~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~~l 409 (878)
.......+.+|+.+ ..++.+.+..+. ...++ .++..+..|+.+....+...+.+-. .+ ...++|
T Consensus 10 ~cs~~~L~~ip~~~~~~l~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~----~~---------~~l~~L 75 (680)
T 1ziw_A 10 DCSHLKLTQVPDDLPTNITVLNLTHNQ-LRRLPAANFTRYSQLTSLDVGFNTISKLEPE----LC---------QKLPML 75 (680)
T ss_dssp ECCSSCCSSCCSCSCTTCSEEECCSSC-CCCCCGGGGGGGTTCSEEECCSSCCCCCCTT----HH---------HHCTTC
T ss_pred ECCCCCccccccccCCCCcEEECCCCC-CCCcCHHHHhCCCcCcEEECCCCccCccCHH----HH---------hcccCc
Confidence 33344556666544 478888888766 44444 4566666665554433333332110 11 235689
Q ss_pred EEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcccccC
Q 002809 410 TYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 410 ~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
+.|+|++|+|++..+..|++|++|++|+|++|++++..|..++.++ |++|+|++|++++..|..+.++++|+.|+++.+
T Consensus 76 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 76 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 9999999999955555799999999999999999977778899999 999999999999998999999999987766554
No 359
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.43 E-value=1.4e-07 Score=105.79 Aligned_cols=144 Identities=19% Similarity=0.178 Sum_probs=102.4
Q ss_pred CceeEEEEEecCCCCCchhh----hhhhhheecccccccccc-chHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecC
Q 002809 326 GGNYSFSLYKTGNSTLPPII----NAIEVYSVKEFLQLQTEQ-IDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCS 400 (878)
Q Consensus 326 ~~~~~~~l~~t~~s~lpp~i----nalEi~~l~~~~~~~t~~-~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~ 400 (878)
.....+.+..+....+|+.+ ..++.+.+..+. ...++ ..+..+..|+.+....+...+.|.. .
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~------- 112 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ-IEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH----V------- 112 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSC-CCEECTTTTTTCTTCCEEECCSSCCCCCCTT----T-------
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCc-ccccChhhccCCCCcCEEECCCCCCCcCCHH----H-------
Confidence 44556777777777787753 467788887765 44443 3556666666555444444443321 0
Q ss_pred CCCCCCCcEEEEEecCCCccccchhh-hhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcc
Q 002809 401 YGDSSSPRITYLNLSSSGLKGDITSY-VSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERS 478 (878)
Q Consensus 401 ~~~~~~~~l~~l~l~~n~l~g~ip~~-~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~ 478 (878)
....++|+.|+|++|+|+ .+|+. |+++++|+.|+|++|++++..|..++.++ |+.|+|++|++++. + +..++
T Consensus 113 --~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~--~~~l~ 186 (390)
T 3o6n_A 113 --FQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D--LSLIP 186 (390)
T ss_dssp --TTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-C--GGGCT
T ss_pred --hcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc-c--ccccc
Confidence 135678999999999999 56655 69999999999999999988888899999 99999999999964 3 45566
Q ss_pred cCCCccccc
Q 002809 479 KNGSLSLSV 487 (878)
Q Consensus 479 ~l~~l~l~~ 487 (878)
+++.|.++.
T Consensus 187 ~L~~L~l~~ 195 (390)
T 3o6n_A 187 SLFHANVSY 195 (390)
T ss_dssp TCSEEECCS
T ss_pred ccceeeccc
Confidence 666555543
No 360
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.41 E-value=1e-07 Score=94.42 Aligned_cols=75 Identities=20% Similarity=0.169 Sum_probs=50.2
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCch--hhhhcccCCCc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPV--ELLERSKNGSL 483 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~--~l~~~~~l~~l 483 (878)
++|+.|+|++|+|++. +.|++|++|+.|+|++|+|++..|..++.++ |+.|+|++|+|+ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 3677777777777753 5677777777777777777743333346677 777777777774 5665 66666666643
Q ss_pred c
Q 002809 484 S 484 (878)
Q Consensus 484 ~ 484 (878)
+
T Consensus 119 ~ 119 (176)
T 1a9n_A 119 C 119 (176)
T ss_dssp E
T ss_pred E
Confidence 3
No 361
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.41 E-value=1.5e-07 Score=102.08 Aligned_cols=74 Identities=23% Similarity=0.344 Sum_probs=39.6
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
.++|+.|+|++|+|++..+ ++++++|+.|+|++|++++ +|. +..++ |+.|+|++|++++ +|. +..+++|+.|+
T Consensus 128 l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 201 (308)
T 1h6u_A 128 LSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVH 201 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEE
T ss_pred CCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCc-Chh-hcCCCCCCEEE
Confidence 4456666666666653322 5566666666666666653 333 55555 6666666666653 222 45555555443
Q ss_pred c
Q 002809 485 L 485 (878)
Q Consensus 485 l 485 (878)
+
T Consensus 202 L 202 (308)
T 1h6u_A 202 L 202 (308)
T ss_dssp C
T ss_pred c
Confidence 3
No 362
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.40 E-value=4.6e-08 Score=106.20 Aligned_cols=59 Identities=32% Similarity=0.446 Sum_probs=32.6
Q ss_pred CcEEEEEecCCCccccchhhhhcc---CCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCC
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNL---TSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNG 468 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l---~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g 468 (878)
++|+.|+|++|+|++.+|+.++.+ ++|+.|+|++|+|+ .+|..+. + |+.|+|++|+|+|
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR 286 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC
Confidence 455555555555555555555555 35555555555555 5555443 3 5555555555553
No 363
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.39 E-value=1.7e-07 Score=103.18 Aligned_cols=77 Identities=21% Similarity=0.185 Sum_probs=69.2
Q ss_pred EEEecCC-CccccchhhhhccCCCCEEeCcC-CcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCccccc
Q 002809 411 YLNLSSS-GLKGDITSYVSNLTSLQFLDLSN-NNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLSV 487 (878)
Q Consensus 411 ~l~l~~n-~l~g~ip~~~~~l~~L~~L~Ls~-N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~~ 487 (878)
.++++++ +|+ .||. |..+++|+.|+|++ |+|++..|..|+.|+ |+.|+|++|+|+|..|..+.++++|+.|+|+.
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4699998 999 5999 99999999999996 999988778999999 99999999999998888999999999877765
Q ss_pred CC
Q 002809 488 GG 489 (878)
Q Consensus 488 ~~ 489 (878)
+.
T Consensus 90 N~ 91 (347)
T 2ifg_A 90 NA 91 (347)
T ss_dssp SC
T ss_pred Cc
Confidence 53
No 364
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.39 E-value=1.2e-07 Score=111.68 Aligned_cols=119 Identities=23% Similarity=0.249 Sum_probs=87.5
Q ss_pred ceeEEEEEecCCCCCchhhhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCC
Q 002809 327 GNYSFSLYKTGNSTLPPIINAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSS 406 (878)
Q Consensus 327 ~~~~~~l~~t~~s~lpp~inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~ 406 (878)
....+.|..+..+.+|..+..|+.+.+..|. .+.+|. +.. +|+.+....+...+-|- .+
T Consensus 81 ~L~~L~Ls~N~l~~ip~~l~~L~~L~Ls~N~-l~~ip~-l~~--~L~~L~Ls~N~l~~lp~-----------------~l 139 (571)
T 3cvr_A 81 QITVLEITQNALISLPELPASLEYLDACDNR-LSTLPE-LPA--SLKHLDVDNNQLTMLPE-----------------LP 139 (571)
T ss_dssp TCSEEECCSSCCSCCCCCCTTCCEEECCSSC-CSCCCC-CCT--TCCEEECCSSCCSCCCC-----------------CC
T ss_pred CCCEEECcCCCCcccccccCCCCEEEccCCC-CCCcch-hhc--CCCEEECCCCcCCCCCC-----------------cC
Confidence 3567777778888888667788888888875 555776 432 33333333333333221 34
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhh
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLE 476 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~ 476 (878)
++|+.|+|++|+|++ ||. .+++|+.|+|++|+|++ ||. ++ + |+.|+|++|+|+ .||. +..
T Consensus 140 ~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~ 200 (571)
T 3cvr_A 140 ALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV 200 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC-
T ss_pred ccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH
Confidence 689999999999996 887 68999999999999997 888 66 6 999999999999 8888 554
No 365
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.38 E-value=2.9e-07 Score=105.06 Aligned_cols=96 Identities=23% Similarity=0.209 Sum_probs=79.2
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCc
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~ 465 (878)
.|..|.|+... ..++.++.|+|++|+|++..+..|.+|++|+.|+|++|+|++..|..|..++ |+.|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 46788997532 3446789999999999988889999999999999999999977778899999 9999999999
Q ss_pred CCCCCchhhhhcccCCCcccccC
Q 002809 466 LNGSVPVELLERSKNGSLSLSVG 488 (878)
Q Consensus 466 l~g~iP~~l~~~~~l~~l~l~~~ 488 (878)
|++..+..+..+++|+.|+++.+
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N 146 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNN 146 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSC
T ss_pred CCeeCHhHhhccccCceeeCCCC
Confidence 99555557888888887666543
No 366
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.37 E-value=2.9e-07 Score=100.79 Aligned_cols=92 Identities=25% Similarity=0.248 Sum_probs=78.0
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCc
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~ 465 (878)
.|+.+.|+... ...++|+.|+|++|+|++..|..|+++++|+.|+|++|++++..|..++.++ |+.|+|++|+
T Consensus 34 ~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 113 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113 (332)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSC
T ss_pred cCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCc
Confidence 68889997542 2346899999999999987788999999999999999999988899999999 9999999999
Q ss_pred CCCCCchhhhhcccCCCccccc
Q 002809 466 LNGSVPVELLERSKNGSLSLSV 487 (878)
Q Consensus 466 l~g~iP~~l~~~~~l~~l~l~~ 487 (878)
++ .+|..+. ++|+.|+++.
T Consensus 114 l~-~l~~~~~--~~L~~L~l~~ 132 (332)
T 2ft3_A 114 LV-EIPPNLP--SSLVELRIHD 132 (332)
T ss_dssp CC-SCCSSCC--TTCCEEECCS
T ss_pred CC-ccCcccc--ccCCEEECCC
Confidence 99 7888776 5666555543
No 367
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.37 E-value=3.5e-07 Score=99.89 Aligned_cols=91 Identities=23% Similarity=0.293 Sum_probs=77.2
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCc
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~ 465 (878)
.|+.+.|+... ..++.|+.|+|++|+|++..+..|+++++|+.|+|++|++++..|..++.++ |+.|+|++|+
T Consensus 32 ~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111 (330)
T ss_dssp ETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred CCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc
Confidence 68889998532 2356899999999999987777999999999999999999988899999999 9999999999
Q ss_pred CCCCCchhhhhcccCCCcccc
Q 002809 466 LNGSVPVELLERSKNGSLSLS 486 (878)
Q Consensus 466 l~g~iP~~l~~~~~l~~l~l~ 486 (878)
++ .+|..+. ++|+.|.++
T Consensus 112 l~-~l~~~~~--~~L~~L~l~ 129 (330)
T 1xku_A 112 LK-ELPEKMP--KTLQELRVH 129 (330)
T ss_dssp CS-BCCSSCC--TTCCEEECC
T ss_pred CC-ccChhhc--ccccEEECC
Confidence 99 7887765 566655544
No 368
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.35 E-value=1.5e-07 Score=102.04 Aligned_cols=78 Identities=27% Similarity=0.368 Sum_probs=62.5
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|+|++ +|+ +..|++|+.|+|++|++++..| ++.++ |+.|+|++|++++ +|. +..+++|+.|
T Consensus 105 ~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L 178 (308)
T 1h6u_A 105 GLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTL 178 (308)
T ss_dssp TCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEE
T ss_pred CCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEE
Confidence 45689999999999986 454 8999999999999999985443 77888 9999999999985 554 7888888876
Q ss_pred ccccC
Q 002809 484 SLSVG 488 (878)
Q Consensus 484 ~l~~~ 488 (878)
+++.+
T Consensus 179 ~l~~n 183 (308)
T 1h6u_A 179 KADDN 183 (308)
T ss_dssp ECCSS
T ss_pred ECCCC
Confidence 66544
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.35 E-value=1.6e-07 Score=103.26 Aligned_cols=77 Identities=30% Similarity=0.347 Sum_probs=62.1
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|++++. +.+..+++|+.|+|++|++++..|..++.++ |+.|+|++|++++..| +..+++|+.|
T Consensus 263 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 338 (347)
T 4fmz_A 263 DLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSA 338 (347)
T ss_dssp TCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEE
T ss_pred cCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhcccee
Confidence 456888899999988864 4688889999999999999888888888888 9999999999887655 7777777754
Q ss_pred cc
Q 002809 484 SL 485 (878)
Q Consensus 484 ~l 485 (878)
++
T Consensus 339 ~l 340 (347)
T 4fmz_A 339 DF 340 (347)
T ss_dssp SS
T ss_pred eh
Confidence 44
No 370
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.35 E-value=2.4e-07 Score=91.67 Aligned_cols=81 Identities=20% Similarity=0.152 Sum_probs=68.6
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCc--cCCCCc-ceEEEecCCcCCCCCchh----hhh
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPD--FLSKLP-LRTLNLQGNKLNGSVPVE----LLE 476 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~--~~~~l~-L~~L~ls~N~l~g~iP~~----l~~ 476 (878)
...++|+.|+|++|+|++..|..++.+++|+.|+|++|+|+ .+|. .+..++ |+.|+|++|.++ .+|.. +..
T Consensus 61 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~ 138 (176)
T 1a9n_A 61 PLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYK 138 (176)
T ss_dssp CCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHH
T ss_pred ccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHH
Confidence 34578999999999999544455599999999999999996 7887 788999 999999999998 67875 888
Q ss_pred cccCCCcccc
Q 002809 477 RSKNGSLSLS 486 (878)
Q Consensus 477 ~~~l~~l~l~ 486 (878)
+++++.|+++
T Consensus 139 l~~L~~Ld~~ 148 (176)
T 1a9n_A 139 VPQVRVLDFQ 148 (176)
T ss_dssp CTTCSEETTE
T ss_pred CCccceeCCC
Confidence 8888876554
No 371
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.34 E-value=1.3e-07 Score=104.54 Aligned_cols=139 Identities=17% Similarity=0.166 Sum_probs=75.6
Q ss_pred EecCCCCCchhh-hhhhhheeccccccccccc-hHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCCcEEE
Q 002809 334 YKTGNSTLPPII-NAIEVYSVKEFLQLQTEQI-DVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSPRITY 411 (878)
Q Consensus 334 ~~t~~s~lpp~i-nalEi~~l~~~~~~~t~~~-d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~~l~~ 411 (878)
..+....+|..+ ..++.+.+..+. .+.++. .+..+..|+.+....+...+.+.. .....++|+.
T Consensus 39 ~~~~l~~iP~~~~~~L~~L~l~~n~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-------------~~~~l~~L~~ 104 (353)
T 2z80_A 39 SSGSLNSIPSGLTEAVKSLDLSNNR-ITYISNSDLQRCVNLQALVLTSNGINTIEED-------------SFSSLGSLEH 104 (353)
T ss_dssp CSTTCSSCCTTCCTTCCEEECTTSC-CCEECTTTTTTCTTCCEEECTTSCCCEECTT-------------TTTTCTTCCE
T ss_pred CCCCcccccccccccCcEEECCCCc-CcccCHHHhccCCCCCEEECCCCccCccCHh-------------hcCCCCCCCE
Confidence 344555555532 366666666654 333433 344444444333322222221110 0123456777
Q ss_pred EEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCc--cCCCCc-ceEEEecCCc-CCCCCchhhhhcccCCCccccc
Q 002809 412 LNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPD--FLSKLP-LRTLNLQGNK-LNGSVPVELLERSKNGSLSLSV 487 (878)
Q Consensus 412 l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~--~~~~l~-L~~L~ls~N~-l~g~iP~~l~~~~~l~~l~l~~ 487 (878)
|+|++|+|++..+..++++++|+.|+|++|+++ .+|. .+..++ |+.|+|++|+ +++..|..+..+++|+.|+++.
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCC
Confidence 777777777544444777777777777777777 4554 566676 7777777774 4433345666666666555443
No 372
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.33 E-value=5.4e-08 Score=101.29 Aligned_cols=73 Identities=19% Similarity=0.243 Sum_probs=36.8
Q ss_pred CcEEEEEecC-CCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ce---EEEecCC-cCCCCCchhhhhcccC
Q 002809 407 PRITYLNLSS-SGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LR---TLNLQGN-KLNGSVPVELLERSKN 480 (878)
Q Consensus 407 ~~l~~l~l~~-n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~---~L~ls~N-~l~g~iP~~l~~~~~l 480 (878)
++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++ +|. ++.++ |+ .|+|++| ++++..|..+..++++
T Consensus 80 ~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L 157 (239)
T 2xwt_C 80 SKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNE 157 (239)
T ss_dssp TTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSS
T ss_pred cCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcc
Confidence 3555555555 55554334455555555555555555553 554 44444 44 5555555 5553223334444444
Q ss_pred C
Q 002809 481 G 481 (878)
Q Consensus 481 ~ 481 (878)
+
T Consensus 158 ~ 158 (239)
T 2xwt_C 158 T 158 (239)
T ss_dssp E
T ss_pred e
Confidence 4
No 373
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.32 E-value=3.5e-06 Score=91.77 Aligned_cols=131 Identities=19% Similarity=0.212 Sum_probs=98.5
Q ss_pred ccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcc----cceeeeeecccCCCcceeEeeeccCCC
Q 002809 572 RTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHH----RNLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H----~nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
+.++.|....||+. +..+++|+.... .....+.+|.++|..+++ -.+.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v---g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC---NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE---TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE---CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 46899999999987 777888876432 223568899999999976 123344444 56789999999988
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCC-------------------------------------------
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCK------------------------------------------- 684 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~------------------------------------------- 684 (878)
+.+... ..++..++..++.++++.|+.||+...
T Consensus 114 l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (320)
T 3r70_A 114 ITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHI 189 (320)
T ss_dssp CCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred cccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHH
Confidence 874321 235677778888888888888885321
Q ss_pred -----------------CCeEecCCCCccEEEcCCCcEEEeecCCccc
Q 002809 685 -----------------PPIVHRDVKSTNILLNEKLQAKLADFGLSKS 715 (878)
Q Consensus 685 -----------------~~ivHrDLKp~NILl~~~~~~kL~DFGla~~ 715 (878)
+.++|+|++|.|||++++..+.|.||+.+..
T Consensus 190 ~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 190 ETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999976679999998854
No 374
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.32 E-value=3.3e-07 Score=109.04 Aligned_cols=67 Identities=28% Similarity=0.333 Sum_probs=35.5
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERS 478 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~ 478 (878)
++|+.|+|++|+|+ .||. .+++|+.|+|++|+|+ .||..+..++ |+.|+|++|.|+|.+|..+..+.
T Consensus 241 ~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 241 SELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 34555555555555 3444 4455555555555555 5555555555 55555555555555555554443
No 375
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.31 E-value=2.7e-07 Score=105.87 Aligned_cols=74 Identities=26% Similarity=0.419 Sum_probs=52.2
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCcceEEEecCCcCCCCCchhhhhcccCCCcccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLPLRTLNLQGNKLNGSVPVELLERSKNGSLSLS 486 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~ 486 (878)
++|+.|+|++|+|++ +| +|+++++|+.|+|++|++++ +|..+. .|+.|+|++|++++ +| ++..+++|+.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~~--~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLPP--SLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCCT--TCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCcc--cccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 467788888888875 77 57888888888888888874 665432 37777788887775 66 57777777655554
Q ss_pred c
Q 002809 487 V 487 (878)
Q Consensus 487 ~ 487 (878)
.
T Consensus 204 ~ 204 (454)
T 1jl5_A 204 N 204 (454)
T ss_dssp S
T ss_pred C
Confidence 3
No 376
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.30 E-value=6.6e-08 Score=105.34 Aligned_cols=81 Identities=21% Similarity=0.145 Sum_probs=39.5
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSL 485 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l 485 (878)
++|+.|+|++|+|++. | ....+++|+.|+|++|+|+ .+|..+..++ |+.|+|++|+|+ .+|..+..+++++. +
T Consensus 169 ~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~--L 242 (317)
T 3o53_A 169 DTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH--F 242 (317)
T ss_dssp TTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE--E
T ss_pred CcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE--E
Confidence 3455555555555532 2 2223555555555555555 2333355555 555555555555 35555555554442 3
Q ss_pred ccCCCCCC
Q 002809 486 SVGGNPGL 493 (878)
Q Consensus 486 ~~~~n~~l 493 (878)
..++|+..
T Consensus 243 ~l~~N~~~ 250 (317)
T 3o53_A 243 DLRGNGFH 250 (317)
T ss_dssp ECTTCCCB
T ss_pred EccCCCcc
Confidence 33444443
No 377
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.30 E-value=2.8e-07 Score=105.77 Aligned_cols=135 Identities=17% Similarity=0.187 Sum_probs=92.4
Q ss_pred ceeEEEEEecCCCCCchhhhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCC
Q 002809 327 GNYSFSLYKTGNSTLPPIINAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSS 406 (878)
Q Consensus 327 ~~~~~~l~~t~~s~lpp~inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~ 406 (878)
....+.+..+..+.+|.....++.+.+..+. .+.+| ++..+..|+.+....+...+-|- ..
T Consensus 112 ~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~-l~~lp-~~~~l~~L~~L~l~~N~l~~lp~-----------------~~ 172 (454)
T 1jl5_A 112 SLKSLLVDNNNLKALSDLPPLLEYLGVSNNQ-LEKLP-ELQNSSFLKIIDVDNNSLKKLPD-----------------LP 172 (454)
T ss_dssp TCCEEECCSSCCSCCCSCCTTCCEEECCSSC-CSSCC-CCTTCTTCCEEECCSSCCSCCCC-----------------CC
T ss_pred CCcEEECCCCccCcccCCCCCCCEEECcCCC-CCCCc-ccCCCCCCCEEECCCCcCcccCC-----------------Cc
Confidence 3445566666666666665678888887765 45566 46655555555443333333221 22
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCcceEEEecCCcCCCCCchhhhhcccCCCcccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLPLRTLNLQGNKLNGSVPVELLERSKNGSLSLS 486 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~ 486 (878)
.+|+.|+|++|++++ +| .+++|++|+.|+|++|++++ +|.... .|+.|+|++|+++ .+| +++.+++++.|+++
T Consensus 173 ~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~~--~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~ 245 (454)
T 1jl5_A 173 PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLPL--SLESIVAGNNILE-ELP-ELQNLPFLTTIYAD 245 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCCT--TCCEEECCSSCCS-SCC-CCTTCTTCCEEECC
T ss_pred ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCcC--cccEEECcCCcCC-ccc-ccCCCCCCCEEECC
Confidence 478899999999986 67 68899999999999999885 665431 3888888988888 788 47788888766655
Q ss_pred c
Q 002809 487 V 487 (878)
Q Consensus 487 ~ 487 (878)
.
T Consensus 246 ~ 246 (454)
T 1jl5_A 246 N 246 (454)
T ss_dssp S
T ss_pred C
Confidence 4
No 378
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.27 E-value=3.4e-07 Score=105.22 Aligned_cols=75 Identities=28% Similarity=0.334 Sum_probs=56.8
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|++++..| ++.+++|+.|+|++|++++. ..+..++ |+.|+|++|+++|.+| +..+++++.|
T Consensus 307 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 380 (466)
T 1o6v_A 307 NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQL 380 (466)
T ss_dssp GCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEE
T ss_pred CCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEE
Confidence 34678888888888887665 77888888888888888864 3577777 8888888888887776 6777777755
Q ss_pred cc
Q 002809 484 SL 485 (878)
Q Consensus 484 ~l 485 (878)
.+
T Consensus 381 ~l 382 (466)
T 1o6v_A 381 GL 382 (466)
T ss_dssp EC
T ss_pred ec
Confidence 44
No 379
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.23 E-value=3.1e-07 Score=95.53 Aligned_cols=77 Identities=22% Similarity=0.144 Sum_probs=43.4
Q ss_pred EEEEEecCC-CccccchhhhhccCCCC-EEeCcCCcccCcCCccCCCCc-ceEEEecCCc-CCCCCchhhhhc-ccCCCc
Q 002809 409 ITYLNLSSS-GLKGDITSYVSNLTSLQ-FLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNK-LNGSVPVELLER-SKNGSL 483 (878)
Q Consensus 409 l~~l~l~~n-~l~g~ip~~~~~l~~L~-~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~-l~g~iP~~l~~~-~~l~~l 483 (878)
|+.|+|++| ++++..+..|.++++|+ .|+|++|+++ .||......+ |+.|+|++|+ +++..|..+..+ ++++.|
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L 210 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEE
Confidence 446666666 66644444566666666 6666666666 5555433334 6666666663 663333445555 555544
Q ss_pred ccc
Q 002809 484 SLS 486 (878)
Q Consensus 484 ~l~ 486 (878)
+++
T Consensus 211 ~l~ 213 (239)
T 2xwt_C 211 DVS 213 (239)
T ss_dssp ECT
T ss_pred ECC
Confidence 443
No 380
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.23 E-value=4.4e-07 Score=98.39 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=49.3
Q ss_pred CCcEEEEEecCCCccccch----hhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCC--Cchh--hhh
Q 002809 406 SPRITYLNLSSSGLKGDIT----SYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGS--VPVE--LLE 476 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip----~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~--iP~~--l~~ 476 (878)
.++|+.|+|++|++++.+| ..+..+++|+.|+|++|++++..|..++.++ |+.|+|++|++.|. +|.. +..
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4566667777777766544 3445666777777777777666666666666 77777777766543 2222 245
Q ss_pred cccCCCcccc
Q 002809 477 RSKNGSLSLS 486 (878)
Q Consensus 477 ~~~l~~l~l~ 486 (878)
+++|+.|.++
T Consensus 196 l~~L~~L~Ls 205 (310)
T 4glp_A 196 FPAIQNLALR 205 (310)
T ss_dssp SCCCCSCBCC
T ss_pred CCCCCEEECC
Confidence 5556655443
No 381
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.23 E-value=5.9e-07 Score=103.14 Aligned_cols=73 Identities=26% Similarity=0.349 Sum_probs=40.8
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
.++|+.|+|++|+|++ +| ++++++|+.|+|++|+|++ +| ++.++ |+.|+|++|++.|.+ .+..+++|+.|+
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 4456666666666654 33 5666666666666666664 33 55555 666666666555555 244555555444
Q ss_pred cc
Q 002809 485 LS 486 (878)
Q Consensus 485 l~ 486 (878)
++
T Consensus 177 ls 178 (457)
T 3bz5_A 177 CS 178 (457)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.21 E-value=3.6e-07 Score=108.70 Aligned_cols=133 Identities=22% Similarity=0.274 Sum_probs=91.0
Q ss_pred eeEEEEEecCCCCCchhhhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCC
Q 002809 328 NYSFSLYKTGNSTLPPIINAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSSP 407 (878)
Q Consensus 328 ~~~~~l~~t~~s~lpp~inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~~ 407 (878)
...+.+..+..+.+|..+..|+.+.+..+. ...+|... .+|+.+....+....-| ..++
T Consensus 163 L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~-l~~l~~~~---~~L~~L~L~~N~l~~l~-----------------~~~~ 221 (622)
T 3g06_A 163 LCKLWAYNNQLTSLPMLPSGLQELSVSDNQ-LASLPTLP---SELYKLWAYNNRLTSLP-----------------ALPS 221 (622)
T ss_dssp CCEEECCSSCCSCCCCCCTTCCEEECCSSC-CSCCCCCC---TTCCEEECCSSCCSSCC-----------------CCCT
T ss_pred CCEEECCCCCCCCCcccCCCCcEEECCCCC-CCCCCCcc---chhhEEECcCCcccccC-----------------CCCC
Confidence 345555566666666666667777776654 44454432 12222221112221111 1236
Q ss_pred cEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcccc
Q 002809 408 RITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSLS 486 (878)
Q Consensus 408 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l~ 486 (878)
+|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .||. .++ |+.|+|++|+|+ .||..+.++++|..|++
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L- 291 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL- 291 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC-
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe-
Confidence 89999999999996 77 66799999999999999 7887 556 999999999999 89999999999886554
Q ss_pred cCCCCC
Q 002809 487 VGGNPG 492 (878)
Q Consensus 487 ~~~n~~ 492 (878)
.+|+.
T Consensus 292 -~~N~l 296 (622)
T 3g06_A 292 -EGNPL 296 (622)
T ss_dssp -CSCCC
T ss_pred -cCCCC
Confidence 55554
No 383
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.20 E-value=1.1e-06 Score=92.89 Aligned_cols=72 Identities=25% Similarity=0.306 Sum_probs=36.2
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
.++|+.|+|++|+|++. |+ +++|++|+.|+|++|+|++ +|.... + |+.|+|++|++++ +| .+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 34566666666666533 22 6666666666666666653 343222 3 5555555555553 22 344444444333
No 384
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.17 E-value=9.6e-07 Score=93.39 Aligned_cols=80 Identities=31% Similarity=0.326 Sum_probs=64.1
Q ss_pred CCCcEEEEEecCCCccc--cchhhhhccCCCCEEeCcCCcccCcC-CccCCCCcceEEEecCCcCCCCCch-------hh
Q 002809 405 SSPRITYLNLSSSGLKG--DITSYVSNLTSLQFLDLSNNNLTGSV-PDFLSKLPLRTLNLQGNKLNGSVPV-------EL 474 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g--~ip~~~~~l~~L~~L~Ls~N~l~g~i-P~~~~~l~L~~L~ls~N~l~g~iP~-------~l 474 (878)
..++|+.|+|++|+|++ .+|..+..|++|+.|+|++|+|++.- -..+..+.|+.|+|++|.+++.+|. .+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCccccCcchhHHHHHH
Confidence 35789999999999998 78899999999999999999999751 1223444699999999999998873 35
Q ss_pred hhcccCCCcc
Q 002809 475 LERSKNGSLS 484 (878)
Q Consensus 475 ~~~~~l~~l~ 484 (878)
..+++|..|+
T Consensus 248 ~~~P~L~~LD 257 (267)
T 3rw6_A 248 ERFPKLLRLD 257 (267)
T ss_dssp HHCTTCCEES
T ss_pred HHCcccCeEC
Confidence 6677776553
No 385
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.17 E-value=6.3e-06 Score=88.45 Aligned_cols=137 Identities=18% Similarity=0.118 Sum_probs=90.5
Q ss_pred ccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhccc---ceeeeeecccCCCcceeEeeeccCCC
Q 002809 572 RTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHR---NLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~---nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
+.|+.|.++.||+.+..+ ..++||+...........|.+|++.|+.+++. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 468999999999998765 78999997544333346789999999999875 467777763 4689999999987
Q ss_pred hhh-----------hhccccCC-------------------CCCHHHHH---------H-----------HHHHHHHHHH
Q 002809 648 LQE-----------YLSDISKK-------------------VLSSQERL---------R-----------IAVESAQGLE 677 (878)
Q Consensus 648 L~~-----------~l~~~~~~-------------------~l~~~~~~---------~-----------i~~qia~gL~ 677 (878)
+.. .||..... .-+|.... + ....+-+.++
T Consensus 97 ~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~ 176 (288)
T 3d1u_A 97 PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLD 176 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 532 12221110 01233211 0 0111122222
Q ss_pred HHH----hCCCCCeEecCCCCccEEEcCCCcEEEeecCCcc
Q 002809 678 YLH----NGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSK 714 (878)
Q Consensus 678 yLH----~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~ 714 (878)
.|. ....+.++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 177 ~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 177 ALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp THHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 232 233568999999999999998 45889999 553
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.16 E-value=1e-07 Score=96.38 Aligned_cols=77 Identities=18% Similarity=0.229 Sum_probs=61.4
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCcc
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLS 484 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~ 484 (878)
.++|+.|+|++|+|++ +| .+.++++|+.|+|++|+|+ .+|..+..++ |+.|+|++|++++ +| .+..+++|+.|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 4578888888888886 77 8888888888888888888 7887777777 8888888888885 66 677778777665
Q ss_pred ccc
Q 002809 485 LSV 487 (878)
Q Consensus 485 l~~ 487 (878)
++.
T Consensus 122 l~~ 124 (198)
T 1ds9_A 122 MSN 124 (198)
T ss_dssp ESE
T ss_pred CCC
Confidence 544
No 387
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.16 E-value=1.1e-06 Score=100.91 Aligned_cols=134 Identities=19% Similarity=0.141 Sum_probs=91.2
Q ss_pred eeEEEEEecCCCCCc-hhhhhhhhheeccccccccccchHHHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCC
Q 002809 328 NYSFSLYKTGNSTLP-PIINAIEVYSVKEFLQLQTEQIDVDAITNIKATYGLKKNWQGDPCAPLAYWWDGLNCSYGDSSS 406 (878)
Q Consensus 328 ~~~~~l~~t~~s~lp-p~inalEi~~l~~~~~~~t~~~d~~al~~lk~~~~~~~~w~~~pc~~~~~~w~gv~C~~~~~~~ 406 (878)
...+.+..+..+.+| ..+..++.+.+..+. .+.++ +..|.+|+.+....+...+-| ....
T Consensus 66 L~~L~Ls~n~l~~~~~~~l~~L~~L~Ls~N~-l~~~~--~~~l~~L~~L~L~~N~l~~l~----------------~~~l 126 (457)
T 3bz5_A 66 LTKLICTSNNITTLDLSQNTNLTYLACDSNK-LTNLD--VTPLTKLTYLNCDTNKLTKLD----------------VSQN 126 (457)
T ss_dssp CSEEECCSSCCSCCCCTTCTTCSEEECCSSC-CSCCC--CTTCTTCCEEECCSSCCSCCC----------------CTTC
T ss_pred CCEEEccCCcCCeEccccCCCCCEEECcCCC-Cceee--cCCCCcCCEEECCCCcCCeec----------------CCCC
Confidence 345566566666554 123467777777655 44443 444444444433333332221 1456
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSL 485 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l 485 (878)
++|+.|+|++|+|++ +| ++++++|+.|+|++|++.|.++ ++.++ |+.|+|++|++++ +| +..++.++.|.+
T Consensus 127 ~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l 198 (457)
T 3bz5_A 127 PLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNC 198 (457)
T ss_dssp TTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCC--CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEEC
T ss_pred CcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccc--cccCCcCCEEECCCCccce-ec--cccCCCCCEEEC
Confidence 789999999999997 44 8999999999999998888884 77888 9999999999996 66 777888877666
Q ss_pred ccC
Q 002809 486 SVG 488 (878)
Q Consensus 486 ~~~ 488 (878)
+.+
T Consensus 199 ~~N 201 (457)
T 3bz5_A 199 DTN 201 (457)
T ss_dssp CSS
T ss_pred cCC
Confidence 544
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.16 E-value=7.1e-07 Score=98.58 Aligned_cols=96 Identities=18% Similarity=0.153 Sum_probs=78.0
Q ss_pred cccceecCCCC------CCCCcEEEEEecCCCccccch-hhhhccCCCCEEeCcCCcccCcCCc-cCCCCc--ceEEEec
Q 002809 393 WWDGLNCSYGD------SSSPRITYLNLSSSGLKGDIT-SYVSNLTSLQFLDLSNNNLTGSVPD-FLSKLP--LRTLNLQ 462 (878)
Q Consensus 393 ~w~gv~C~~~~------~~~~~l~~l~l~~n~l~g~ip-~~~~~l~~L~~L~Ls~N~l~g~iP~-~~~~l~--L~~L~ls 462 (878)
.|..|.|+... +.+++++.|+|++|+|+ .|| ..|.+|++|+.|+|++|++.+.||. .|.+++ ++.+.++
T Consensus 10 ~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 10 SNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp ETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 68889998542 23468999999999999 565 5799999999999999999988885 467887 5568888
Q ss_pred CCcCCCCCchhhhhcccCCCcccccCC
Q 002809 463 GNKLNGSVPVELLERSKNGSLSLSVGG 489 (878)
Q Consensus 463 ~N~l~g~iP~~l~~~~~l~~l~l~~~~ 489 (878)
+|+|++..|..+..+++|+.|.++.+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~ 115 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTG 115 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEEC
T ss_pred CCcccccCchhhhhccccccccccccc
Confidence 999996667788889999877765543
No 389
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.16 E-value=7.9e-07 Score=97.62 Aligned_cols=80 Identities=24% Similarity=0.383 Sum_probs=67.2
Q ss_pred CCCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCC
Q 002809 404 SSSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGS 482 (878)
Q Consensus 404 ~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~ 482 (878)
...++|+.|+|++|++++ + +.+..+++|+.|+|++|++++ +| .+..++ |+.|+|++|++++..|..+..+++|+.
T Consensus 240 ~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 315 (347)
T 4fmz_A 240 ANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTT 315 (347)
T ss_dssp TTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSE
T ss_pred hcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCE
Confidence 345789999999999986 4 579999999999999999996 44 477888 999999999999888888999998886
Q ss_pred ccccc
Q 002809 483 LSLSV 487 (878)
Q Consensus 483 l~l~~ 487 (878)
|+++.
T Consensus 316 L~L~~ 320 (347)
T 4fmz_A 316 LFLSQ 320 (347)
T ss_dssp EECCS
T ss_pred EEccC
Confidence 65543
No 390
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.12 E-value=1.7e-05 Score=85.71 Aligned_cols=135 Identities=22% Similarity=0.237 Sum_probs=95.0
Q ss_pred ccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhccc---ceeeeeeccc-CCCcceeEeeeccCCC
Q 002809 572 RTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHR---NLTSLVGHCD-EDNQTALIYEFMANGN 647 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~---nIv~l~g~~~-~~~~~~lV~Ey~~~gs 647 (878)
+.++.|....||+. +..+++|+-. .......+.+|.++|..+++. .+.+.+.++. ..+..++|||+++|..
T Consensus 25 ~~l~~G~~n~v~~v---g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV---NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE---TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE---CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45788888999987 6778888842 233456889999999999753 2455666653 4556789999999988
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------------------------------
Q 002809 648 LQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNG--------------------------------------------- 682 (878)
Q Consensus 648 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~--------------------------------------------- 682 (878)
|.+..- ..++...+..++.++++.|+.||+.
T Consensus 100 l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 100 LGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp CHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred Cchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 876321 1234555556666666666666642
Q ss_pred ------------CCCCeEecCCCCccEEEcC---CCc-EEEeecCCccc
Q 002809 683 ------------CKPPIVHRDVKSTNILLNE---KLQ-AKLADFGLSKS 715 (878)
Q Consensus 683 ------------~~~~ivHrDLKp~NILl~~---~~~-~kL~DFGla~~ 715 (878)
..+.++|+|+++.|||++. ++. +.|.||+.+..
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335699999999999998 455 58999997753
No 391
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.11 E-value=1.5e-06 Score=99.89 Aligned_cols=76 Identities=29% Similarity=0.357 Sum_probs=53.4
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSL 483 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l 483 (878)
..++|+.|+|++|++++..| ++.+++|+.|+|++|++++..| ++.++ |+.|+|++|++++. ..+..+++|+.|
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 285 GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp TCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 34577777777777776444 7777788888888887776655 56677 78888888877754 356677777655
Q ss_pred ccc
Q 002809 484 SLS 486 (878)
Q Consensus 484 ~l~ 486 (878)
+++
T Consensus 359 ~l~ 361 (466)
T 1o6v_A 359 SAG 361 (466)
T ss_dssp ECC
T ss_pred eCC
Confidence 554
No 392
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.10 E-value=1.1e-05 Score=89.04 Aligned_cols=79 Identities=3% Similarity=0.007 Sum_probs=56.3
Q ss_pred ccc-cccccEEEEEEEEc--------ceeEEEEEeccCC---hhhHHHHHHHHHHHHHhccc---ceeeeeecccCC---
Q 002809 572 RTL-GKGGFGTVYYGRLN--------EIDVAVKMLSSSS---AQGFQQFQAEVKLLMRVHHR---NLTSLVGHCDED--- 633 (878)
Q Consensus 572 ~~L-G~G~fG~Vy~~~~~--------~~~vAvK~l~~~~---~~~~~~f~~Ei~~L~~l~H~---nIv~l~g~~~~~--- 633 (878)
+.| +.|....+|+.... +..+++|+..... ......+.+|+.+++.++.. .+.+++.++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78889999988775 5778888765432 11124678899999988532 466778777655
Q ss_pred CcceeEeeeccCCChhh
Q 002809 634 NQTALIYEFMANGNLQE 650 (878)
Q Consensus 634 ~~~~lV~Ey~~~gsL~~ 650 (878)
+..++|||+++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877764
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.07 E-value=2e-07 Score=94.12 Aligned_cols=79 Identities=24% Similarity=0.244 Sum_probs=68.6
Q ss_pred CcEEEEEecCCCccccchh------hhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhccc
Q 002809 407 PRITYLNLSSSGLKGDITS------YVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSK 479 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~------~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~ 479 (878)
.+++.++|+.|.|+|.+|. .++++++|+.|+|++|+|++ +| .+..++ |+.|+|++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3566777888888888777 99999999999999999996 88 788888 999999999999 89998888888
Q ss_pred CCCcccccC
Q 002809 480 NGSLSLSVG 488 (878)
Q Consensus 480 l~~l~l~~~ 488 (878)
|+.|+++.+
T Consensus 95 L~~L~L~~N 103 (198)
T 1ds9_A 95 LEELWISYN 103 (198)
T ss_dssp CSEEEEEEE
T ss_pred CCEEECcCC
Confidence 987777654
No 394
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.98 E-value=2e-05 Score=87.38 Aligned_cols=73 Identities=11% Similarity=0.064 Sum_probs=56.0
Q ss_pred ccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcccc--eeeeeecccCC-CcceeEeeeccCCCh
Q 002809 572 RTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRN--LTSLVGHCDED-NQTALIYEFMANGNL 648 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~n--Iv~l~g~~~~~-~~~~lV~Ey~~~gsL 648 (878)
+.++.|....+|+.+..+..+++|+.... ..+.+|..++..+.... +.++++++... +..++||||++|.++
T Consensus 47 ~~l~gG~~n~~y~v~~~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDVGGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEECCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 45788999999999888889999987543 35888999999987543 45666666544 568999999998766
Q ss_pred h
Q 002809 649 Q 649 (878)
Q Consensus 649 ~ 649 (878)
.
T Consensus 122 ~ 122 (362)
T 3ovc_A 122 Q 122 (362)
T ss_dssp T
T ss_pred c
Confidence 4
No 395
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.96 E-value=1.3e-06 Score=95.27 Aligned_cols=81 Identities=27% Similarity=0.303 Sum_probs=55.3
Q ss_pred CCcEEEEEecCCCcccc-chhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCC-cCCCC-CchhhhhcccCC
Q 002809 406 SPRITYLNLSSSGLKGD-ITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGN-KLNGS-VPVELLERSKNG 481 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~-ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N-~l~g~-iP~~l~~~~~l~ 481 (878)
.++|+.|+|++|++++. +|..+.++++|+.|+|++|++++.+|..++.++ |+.|+|++| .+++. +|..+..+++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 35677777777777665 677777777777777777777777777777776 777777777 56652 566666666666
Q ss_pred Ccccc
Q 002809 482 SLSLS 486 (878)
Q Consensus 482 ~l~l~ 486 (878)
.|+++
T Consensus 172 ~L~l~ 176 (336)
T 2ast_B 172 ELNLS 176 (336)
T ss_dssp EEECC
T ss_pred EEcCC
Confidence 55443
No 396
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.92 E-value=2.7e-05 Score=82.15 Aligned_cols=133 Identities=17% Similarity=0.095 Sum_probs=95.0
Q ss_pred ccccccE-EEEEEEEc--ceeEEEEEeccCChhhHHHHHHHHHHHHHhc-ccceeeeeecccCCCcceeEeeeccCCChh
Q 002809 574 LGKGGFG-TVYYGRLN--EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVH-HRNLTSLVGHCDEDNQTALIYEFMANGNLQ 649 (878)
Q Consensus 574 LG~G~fG-~Vy~~~~~--~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 649 (878)
+..|..| .||+.... +..+.+|+-... ....+.+|...|+.+. +--+.++++++...+..++|||++++.++.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 4445444 68877654 367889986533 3457888999998885 333667888888888999999999998877
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------------
Q 002809 650 EYLSDISKKVLSSQERLRIAVESAQGLEYLHNG----------------------------------------------- 682 (878)
Q Consensus 650 ~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~----------------------------------------------- 682 (878)
+..... ......++.++++.|+.||..
T Consensus 109 ~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 109 QVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred ccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 654321 122345666777777777742
Q ss_pred --------CCCCeEecCCCCccEEEcCCCcEEEeecCCccc
Q 002809 683 --------CKPPIVHRDVKSTNILLNEKLQAKLADFGLSKS 715 (878)
Q Consensus 683 --------~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~ 715 (878)
..+.++|+|+.+.|||+++++.+-|.||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012379999999999999887778999998753
No 397
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=97.92 E-value=1.9e-06 Score=96.21 Aligned_cols=82 Identities=20% Similarity=0.198 Sum_probs=68.1
Q ss_pred CCCcEEEEEecCCCcc----ccchhhhhccCCCCEEeCcCCcccCc----CCccC--CCCc-ceEEEecCCcCCC----C
Q 002809 405 SSPRITYLNLSSSGLK----GDITSYVSNLTSLQFLDLSNNNLTGS----VPDFL--SKLP-LRTLNLQGNKLNG----S 469 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~----g~ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~--~~l~-L~~L~ls~N~l~g----~ 469 (878)
..++|+.|+|++|+|+ +.+|..+..+++|+.|+|++|+|++. +|..+ +.++ |+.|+|++|++++ .
T Consensus 214 ~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~ 293 (386)
T 2ca6_A 214 YCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRT 293 (386)
T ss_dssp GCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHH
T ss_pred cCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHH
Confidence 3568999999999997 78899999999999999999999876 67776 4477 9999999999997 5
Q ss_pred Cchhh-hhcccCCCcccc
Q 002809 470 VPVEL-LERSKNGSLSLS 486 (878)
Q Consensus 470 iP~~l-~~~~~l~~l~l~ 486 (878)
+|..+ .++++|+.|+++
T Consensus 294 l~~~l~~~l~~L~~L~l~ 311 (386)
T 2ca6_A 294 LKTVIDEKMPDLLFLELN 311 (386)
T ss_dssp HHHHHHHHCTTCCEEECT
T ss_pred HHHHHHhcCCCceEEEcc
Confidence 88888 557888865554
No 398
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=97.81 E-value=6.1e-06 Score=92.17 Aligned_cols=81 Identities=19% Similarity=0.276 Sum_probs=62.3
Q ss_pred CcEEEEEecCCCccccch----hhhhccCCCCEEeCcC---CcccCcCCccC-------CCCc-ceEEEecCCcCCC---
Q 002809 407 PRITYLNLSSSGLKGDIT----SYVSNLTSLQFLDLSN---NNLTGSVPDFL-------SKLP-LRTLNLQGNKLNG--- 468 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip----~~~~~l~~L~~L~Ls~---N~l~g~iP~~~-------~~l~-L~~L~ls~N~l~g--- 468 (878)
++|+.|+|++|+|++..+ ..|.++++|+.|+|++ |+++|.+|..+ ..++ |+.|+|++|++++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 568888898888887644 4466888888998888 46677777665 6777 8888999988887
Q ss_pred -CCchhhhhcccCCCccccc
Q 002809 469 -SVPVELLERSKNGSLSLSV 487 (878)
Q Consensus 469 -~iP~~l~~~~~l~~l~l~~ 487 (878)
.+|..+..+++|+.|+++.
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~ 131 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHN 131 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCS
T ss_pred HHHHHHHHhCCCCCEEECcC
Confidence 4788888888888665543
No 399
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.80 E-value=2.8e-06 Score=92.68 Aligned_cols=82 Identities=24% Similarity=0.278 Sum_probs=69.5
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCC-cccC-cCCccCCCCc-ceEEEecCC-cCCCC-Cchhhhhcc-c
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNN-NLTG-SVPDFLSKLP-LRTLNLQGN-KLNGS-VPVELLERS-K 479 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N-~l~g-~iP~~~~~l~-L~~L~ls~N-~l~g~-iP~~l~~~~-~ 479 (878)
.++|+.|+|++|++++.+|..++++++|+.|+|++| .+++ .+|..+..++ |+.|+|++| ++++. +|..+..++ +
T Consensus 117 ~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~ 196 (336)
T 2ast_B 117 CSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSET 196 (336)
T ss_dssp BCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTT
T ss_pred CCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccC
Confidence 357999999999999999999999999999999999 7887 3788788888 999999999 89865 788888888 8
Q ss_pred CCCccccc
Q 002809 480 NGSLSLSV 487 (878)
Q Consensus 480 l~~l~l~~ 487 (878)
|+.|+++.
T Consensus 197 L~~L~l~~ 204 (336)
T 2ast_B 197 ITQLNLSG 204 (336)
T ss_dssp CCEEECCS
T ss_pred CCEEEeCC
Confidence 88766543
No 400
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.78 E-value=6.9e-06 Score=90.97 Aligned_cols=66 Identities=27% Similarity=0.288 Sum_probs=31.2
Q ss_pred cEEEEEecCCCccccchhhhhcc-----CCCCEEeCcCCcccCcCCccCCC----C-c-ceEEEecCCcCCCCCchh
Q 002809 408 RITYLNLSSSGLKGDITSYVSNL-----TSLQFLDLSNNNLTGSVPDFLSK----L-P-LRTLNLQGNKLNGSVPVE 473 (878)
Q Consensus 408 ~l~~l~l~~n~l~g~ip~~~~~l-----~~L~~L~Ls~N~l~g~iP~~~~~----l-~-L~~L~ls~N~l~g~iP~~ 473 (878)
+|+.|+|++|+|++..+..++.+ ++|+.|+|++|+|++..+..++. + + |+.|+|++|+|++..+..
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~ 128 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSE 128 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHH
Confidence 45555555555554444444443 55555555555555444432222 2 3 555555555554443333
No 401
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=97.68 E-value=2.8e-05 Score=85.65 Aligned_cols=73 Identities=21% Similarity=0.200 Sum_probs=52.4
Q ss_pred CCCcEEEEEecCCCccccchh-hhhccCCCCE-EeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCchhhhhc
Q 002809 405 SSPRITYLNLSSSGLKGDITS-YVSNLTSLQF-LDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLER 477 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~-~~~~l~~L~~-L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~ 477 (878)
..++|+.|+|++|++.+.||. .|.+|++|+. +++++|+|++..|..+..++ |+.|++++|+|++..+......
T Consensus 52 ~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~ 127 (350)
T 4ay9_X 52 GFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHS 127 (350)
T ss_dssp TCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCB
T ss_pred CCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhccc
Confidence 346788888888888777765 4677877664 66677888866677788888 8888888888885444444333
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=97.64 E-value=1.6e-05 Score=84.06 Aligned_cols=81 Identities=30% Similarity=0.427 Sum_probs=59.2
Q ss_pred EEecCCC---ccccchhhhhccCCCCEEeCcCCcccC--cCCccCCCCc-ceEEEecCCcCCCCCchhhhhcccCCCccc
Q 002809 412 LNLSSSG---LKGDITSYVSNLTSLQFLDLSNNNLTG--SVPDFLSKLP-LRTLNLQGNKLNGSVPVELLERSKNGSLSL 485 (878)
Q Consensus 412 l~l~~n~---l~g~ip~~~~~l~~L~~L~Ls~N~l~g--~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~~~l~~l~l 485 (878)
|+++.|. +.+.++....+|++|+.|+||+|+|++ .+|..+..++ |+.|+|++|+|++. .++..+..+..-.+
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 4556663 344444445789999999999999998 7788888999 99999999999964 45666663322246
Q ss_pred ccCCCCCCCC
Q 002809 486 SVGGNPGLCS 495 (878)
Q Consensus 486 ~~~~n~~lc~ 495 (878)
...+|| +|+
T Consensus 226 ~L~~Np-l~~ 234 (267)
T 3rw6_A 226 WLDGNS-LCD 234 (267)
T ss_dssp ECTTST-TGG
T ss_pred EccCCc-Ccc
Confidence 677887 443
No 403
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.63 E-value=0.00026 Score=76.97 Aligned_cols=138 Identities=12% Similarity=0.134 Sum_probs=81.6
Q ss_pred cccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhccc--ceeeeeec------ccCCCcceeEeeecc
Q 002809 573 TLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHR--NLTSLVGH------CDEDNQTALIYEFMA 644 (878)
Q Consensus 573 ~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~--nIv~l~g~------~~~~~~~~lV~Ey~~ 644 (878)
.|+.|..+.||+....+..+++|+.... . ..+..|..++..++.. .+.+++.. ....+..++||||++
T Consensus 39 ~l~gG~~n~~~~v~~~~~~~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~ 114 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSGAVCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE 114 (346)
T ss_dssp ECC----CEEEEEEETTEEEEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred eccccccCcEEEEEeCCCCEEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence 4566778899999887777999998752 1 3344566666666422 23344431 123556789999999
Q ss_pred CCChhh--------------hhccccC------------CCCCHHHH-------------------------------HH
Q 002809 645 NGNLQE--------------YLSDISK------------KVLSSQER-------------------------------LR 667 (878)
Q Consensus 645 ~gsL~~--------------~l~~~~~------------~~l~~~~~-------------------------------~~ 667 (878)
|..+.. .+|.... ..-.|... ..
T Consensus 115 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (346)
T 2q83_A 115 GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDG 194 (346)
T ss_dssp CBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 865530 1111100 01123211 01
Q ss_pred HHHHHHHHHHHHHh----------CCCCCeEecCCCCccEEEcCCCcEEEeecCCcc
Q 002809 668 IAVESAQGLEYLHN----------GCKPPIVHRDVKSTNILLNEKLQAKLADFGLSK 714 (878)
Q Consensus 668 i~~qia~gL~yLH~----------~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~ 714 (878)
+...+.+++++|+. .....++|+|+++.|||++.++.+.|+||+.+.
T Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 195 FIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11224446666763 124589999999999999888899999999764
No 404
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.62 E-value=1.4e-05 Score=88.37 Aligned_cols=81 Identities=27% Similarity=0.304 Sum_probs=57.0
Q ss_pred CcEEEEEecCCCccccchhhhhcc-----CCCCEEeCcCCcccCcCCccCC----CC-c-ceEEEecCCcCCCCCchh--
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNL-----TSLQFLDLSNNNLTGSVPDFLS----KL-P-LRTLNLQGNKLNGSVPVE-- 473 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l-----~~L~~L~Ls~N~l~g~iP~~~~----~l-~-L~~L~ls~N~l~g~iP~~-- 473 (878)
++|+.|+|++|+|++..+..++.+ ++|+.|+|++|+|++..+..++ .+ + |+.|+|++|+|++.-+..
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI 159 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred CCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH
Confidence 678888999988888777766665 8888999999888866655443 32 4 888899988888644433
Q ss_pred --hhhcc-cCCCccccc
Q 002809 474 --LLERS-KNGSLSLSV 487 (878)
Q Consensus 474 --l~~~~-~l~~l~l~~ 487 (878)
+...+ +++.|+++.
T Consensus 160 ~~l~~~~~~L~~L~Ls~ 176 (362)
T 3goz_A 160 QILAAIPANVNSLNLRG 176 (362)
T ss_dssp HHHHTSCTTCCEEECTT
T ss_pred HHHhcCCccccEeeecC
Confidence 34443 666555543
No 405
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.56 E-value=0.00024 Score=79.45 Aligned_cols=73 Identities=12% Similarity=0.163 Sum_probs=48.9
Q ss_pred ccccccccEEEEEEEE--cceeEEEEEeccCCh-------hhHHHHHHHHHHHHHhcc--cce-eeeeecccCCCcceeE
Q 002809 572 RTLGKGGFGTVYYGRL--NEIDVAVKMLSSSSA-------QGFQQFQAEVKLLMRVHH--RNL-TSLVGHCDEDNQTALI 639 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~--~~~~vAvK~l~~~~~-------~~~~~f~~Ei~~L~~l~H--~nI-v~l~g~~~~~~~~~lV 639 (878)
+.||.|..+.||+++. .++.++||....... .....+..|.+++..+.+ +.. .+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 4689999999999965 347899998653211 123456789999988853 333 345544 23456899
Q ss_pred eeeccCC
Q 002809 640 YEFMANG 646 (878)
Q Consensus 640 ~Ey~~~g 646 (878)
||++++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 406
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.47 E-value=1.9e-05 Score=89.98 Aligned_cols=80 Identities=25% Similarity=0.232 Sum_probs=66.9
Q ss_pred CcEEEEEecCCCcccc----chhhhhccCCCCEEeCcCCcccCcCCccCCC-----Cc-ceEEEecCCcCCC----CCch
Q 002809 407 PRITYLNLSSSGLKGD----ITSYVSNLTSLQFLDLSNNNLTGSVPDFLSK-----LP-LRTLNLQGNKLNG----SVPV 472 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-----l~-L~~L~ls~N~l~g----~iP~ 472 (878)
++|+.|+|++|++++. +|..+.++++|+.|+|++|++++..+..+.. .+ |+.|+|++|++++ .+|.
T Consensus 313 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 392 (461)
T 1z7x_W 313 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 392 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred ccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHH
Confidence 5899999999999976 7888889999999999999998766655542 55 9999999999997 7899
Q ss_pred hhhhcccCCCcccc
Q 002809 473 ELLERSKNGSLSLS 486 (878)
Q Consensus 473 ~l~~~~~l~~l~l~ 486 (878)
.+..+++|+.|+++
T Consensus 393 ~l~~~~~L~~L~l~ 406 (461)
T 1z7x_W 393 TLLANHSLRELDLS 406 (461)
T ss_dssp HHHHCCCCCEEECC
T ss_pred HHHhCCCccEEECC
Confidence 99888988866554
No 407
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.46 E-value=0.00044 Score=74.85 Aligned_cols=136 Identities=19% Similarity=0.168 Sum_probs=92.1
Q ss_pred ccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcc---cceeeeeecccCCCcceeEeeeccCCCh
Q 002809 572 RTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHH---RNLTSLVGHCDEDNQTALIYEFMANGNL 648 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H---~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 648 (878)
+.|+.|....+|+....+..+++|+.... ....+..|.+.|+.+.. ..+.++++++...+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDEVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEESSSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEECCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 45889999999999887788999987643 24678899999998852 4577888888777889999999998765
Q ss_pred hh-----------hhccccC-C-------------------CCCHHHHH---HHH----------------HHHHHH-HH
Q 002809 649 QE-----------YLSDISK-K-------------------VLSSQERL---RIA----------------VESAQG-LE 677 (878)
Q Consensus 649 ~~-----------~l~~~~~-~-------------------~l~~~~~~---~i~----------------~qia~g-L~ 677 (878)
.. .||.... . .-+|.... ++. ..+.+. ..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 31 1222111 0 12454321 111 111111 22
Q ss_pred HHHh-CCCCCeEecCCCCccEEEcCCCcEEEeecC
Q 002809 678 YLHN-GCKPPIVHRDVKSTNILLNEKLQAKLADFG 711 (878)
Q Consensus 678 yLH~-~~~~~ivHrDLKp~NILl~~~~~~kL~DFG 711 (878)
.|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3321 2357899999999999999887 8899974
No 408
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.21 E-value=0.0012 Score=74.49 Aligned_cols=78 Identities=8% Similarity=0.078 Sum_probs=46.2
Q ss_pred CCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcccccc-cCCCCccCccccccC---CCCCccchhhHHHHHH
Q 002809 684 KPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVSTVV-AGTPGYLDPEYYTSN---RLTEKSDVYSFGVVIL 759 (878)
Q Consensus 684 ~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~-~gt~~Y~APE~~~~~---~~t~ksDV~S~Gvvl~ 759 (878)
.+.++|||+++.|||++.++ ++|.||+.+..-.... ...... .-...|++|+..... .-....++......+|
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~--Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF--DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH--HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH--HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 45899999999999999876 9999999876432110 000000 001235555554311 1112345557777777
Q ss_pred HHHhC
Q 002809 760 EIITC 764 (878)
Q Consensus 760 elltG 764 (878)
+.+++
T Consensus 308 ~~y~~ 312 (420)
T 2pyw_A 308 NLFNK 312 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77764
No 409
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.21 E-value=4.9e-05 Score=86.52 Aligned_cols=82 Identities=20% Similarity=0.210 Sum_probs=59.0
Q ss_pred CCcEEEEEecCCCcccc----chhhhhccCCCCEEeCcCCcccCcCCccCCCC-----c-ceEEEecCCcCCCC----Cc
Q 002809 406 SPRITYLNLSSSGLKGD----ITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKL-----P-LRTLNLQGNKLNGS----VP 471 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l-----~-L~~L~ls~N~l~g~----iP 471 (878)
.++|+.|+|++|+|++. +|..+.++++|+.|+|++|++++..+..+... + |+.|+|++|++++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 45788888888888864 77778888888888888888876544444322 4 88888888888865 56
Q ss_pred hhhhhcccCCCccccc
Q 002809 472 VELLERSKNGSLSLSV 487 (878)
Q Consensus 472 ~~l~~~~~l~~l~l~~ 487 (878)
..+..++.++.|+++.
T Consensus 335 ~~l~~~~~L~~L~Ls~ 350 (461)
T 1z7x_W 335 SVLAQNRFLLELQISN 350 (461)
T ss_dssp HHHHHCSSCCEEECCS
T ss_pred HHHhhCCCccEEEccC
Confidence 6666777777665543
No 410
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.19 E-value=7e-05 Score=83.33 Aligned_cols=81 Identities=23% Similarity=0.200 Sum_probs=57.1
Q ss_pred CcEEEEEecCCCccc----cchhhhhccCCCCEEeCcCCcccC----cCCccCCCCc-ceEEEecCCcCCCC----Cchh
Q 002809 407 PRITYLNLSSSGLKG----DITSYVSNLTSLQFLDLSNNNLTG----SVPDFLSKLP-LRTLNLQGNKLNGS----VPVE 473 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g----~ip~~~~~l~~L~~L~Ls~N~l~g----~iP~~~~~l~-L~~L~ls~N~l~g~----iP~~ 473 (878)
+.|+.|+|++|+|+. .++..+..+++|+.|||++|+|+. .++..+...+ |+.|+|++|+|+.. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 468888888888875 356666778888888888888874 2355566666 88888888888742 3344
Q ss_pred hhhcccCCCccccc
Q 002809 474 LLERSKNGSLSLSV 487 (878)
Q Consensus 474 l~~~~~l~~l~l~~ 487 (878)
+...+.|+.|+++.
T Consensus 235 L~~~~~L~~L~Ls~ 248 (372)
T 3un9_A 235 AREHPSLELLHLYF 248 (372)
T ss_dssp HHHCSSCCEEECTT
T ss_pred HHhCCCCCEEeccC
Confidence 55556677555543
No 411
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.99 E-value=0.0021 Score=69.41 Aligned_cols=140 Identities=11% Similarity=0.119 Sum_probs=81.1
Q ss_pred cccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcccce--eeeeecc------cCCCcceeEeeecc
Q 002809 573 TLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNL--TSLVGHC------DEDNQTALIYEFMA 644 (878)
Q Consensus 573 ~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nI--v~l~g~~------~~~~~~~lV~Ey~~ 644 (878)
.|+.|....+|+....+..+++|+..... ....+..|+.++..++...+ .+++... ...+..+++++|++
T Consensus 29 ~i~~G~~n~~~~v~~~~g~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~ 106 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKDPLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE 106 (322)
T ss_dssp EECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCC
T ss_pred ccCCCcccceEEEEeCCccEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCC
Confidence 46678889999998877789999887531 12345678888888753332 3333221 12345688999998
Q ss_pred CCChhh--------------hhccc----cCC---C---CCHHHHHH------------HHHHHHHHHHHHHhC----CC
Q 002809 645 NGNLQE--------------YLSDI----SKK---V---LSSQERLR------------IAVESAQGLEYLHNG----CK 684 (878)
Q Consensus 645 ~gsL~~--------------~l~~~----~~~---~---l~~~~~~~------------i~~qia~gL~yLH~~----~~ 684 (878)
|..+.. .+|.. ... . ..|..... +...+.+.++.++.. ..
T Consensus 107 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~ 186 (322)
T 2ppq_A 107 GMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLP 186 (322)
T ss_dssp CBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSC
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCC
Confidence 865422 01111 000 0 11322110 011244455555532 23
Q ss_pred CCeEecCCCCccEEEcCCCcEEEeecCCcc
Q 002809 685 PPIVHRDVKSTNILLNEKLQAKLADFGLSK 714 (878)
Q Consensus 685 ~~ivHrDLKp~NILl~~~~~~kL~DFGla~ 714 (878)
..++|+|+++.|||++++..+.|+||+.+.
T Consensus 187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 478999999999999987666899998764
No 412
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.93 E-value=0.0027 Score=67.52 Aligned_cols=73 Identities=18% Similarity=0.138 Sum_probs=52.8
Q ss_pred ccccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhccc---ceeeeeecccCCCcceeEeeeccCCC
Q 002809 572 RTLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHR---NLTSLVGHCDEDNQTALIYEFMANGN 647 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~---nIv~l~g~~~~~~~~~lV~Ey~~~gs 647 (878)
+.+|.|..+.||+.++.+ +.+.+|+-..........|.+|...|+.+... -+.+++++. ..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence 468999999999999876 88999987655444445688899999988522 234444432 3478999998765
Q ss_pred h
Q 002809 648 L 648 (878)
Q Consensus 648 L 648 (878)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 413
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.85 E-value=0.0042 Score=66.47 Aligned_cols=127 Identities=10% Similarity=0.099 Sum_probs=75.4
Q ss_pred ccccccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcccce-eeeeecccCCCcceeEeeec-cCCChh
Q 002809 572 RTLGKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNL-TSLVGHCDEDNQTALIYEFM-ANGNLQ 649 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nI-v~l~g~~~~~~~~~lV~Ey~-~~gsL~ 649 (878)
+.|+.|....+|+. ..+++|+....... .....+|..++..+....+ .++++++. +.-++|+||+ ++.+|.
T Consensus 24 ~~l~gG~tN~~~~~----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~l~ 96 (301)
T 3dxq_A 24 LERLGGLTNLVFRA----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQTMS 96 (301)
T ss_dssp EEEESCSSEEEEEE----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEECC
T ss_pred eEcCCcccccccee----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCccCC
Confidence 56888999999998 67888887653221 1233568888888764333 35555443 3347899999 554443
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHHHHHHHh------------------------------------------------
Q 002809 650 EYLSDISKKVLSSQERLRIAVESAQGLEYLHN------------------------------------------------ 681 (878)
Q Consensus 650 ~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~------------------------------------------------ 681 (878)
...... +..++.++++.|+-||+
T Consensus 97 ~~~~~~---------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 167 (301)
T 3dxq_A 97 PEKFKT---------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALA 167 (301)
T ss_dssp HHHHHH---------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHH
T ss_pred HhhHhh---------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHH
Confidence 210000 00112222222222222
Q ss_pred --CCCCCeEecCCCCccEEEcCCCcEEEeecCCccc
Q 002809 682 --GCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKS 715 (878)
Q Consensus 682 --~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~ 715 (878)
.....++|+|+.+.||+ ..++.+.++||..+..
T Consensus 168 ~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 168 AHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp SSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred hcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 12335799999999999 5667789999997753
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.79 E-value=0.0003 Score=70.02 Aligned_cols=37 Identities=8% Similarity=0.086 Sum_probs=17.1
Q ss_pred cEEEEEecCC-Ccccc----chhhhhccCCCCEEeCcCCccc
Q 002809 408 RITYLNLSSS-GLKGD----ITSYVSNLTSLQFLDLSNNNLT 444 (878)
Q Consensus 408 ~l~~l~l~~n-~l~g~----ip~~~~~l~~L~~L~Ls~N~l~ 444 (878)
.|+.|+|++| +|... +...+...++|+.|+|++|+|+
T Consensus 37 ~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 37 DLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp TCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred CCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 4455555555 44321 3333344455555555555544
No 415
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=96.74 E-value=0.00031 Score=78.08 Aligned_cols=37 Identities=22% Similarity=0.129 Sum_probs=16.0
Q ss_pred cEEEEEecCCCccccchhhhh-ccCCCCEEeCcCCccc
Q 002809 408 RITYLNLSSSGLKGDITSYVS-NLTSLQFLDLSNNNLT 444 (878)
Q Consensus 408 ~l~~l~l~~n~l~g~ip~~~~-~l~~L~~L~Ls~N~l~ 444 (878)
+|+.|+|++|+|+..-...+. .|++|+.|+|++|+|+
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~ 139 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG 139 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC
Confidence 455555555554433222222 2344445555555444
No 416
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.73 E-value=0.0042 Score=70.30 Aligned_cols=71 Identities=17% Similarity=0.256 Sum_probs=49.2
Q ss_pred ccccccccEEEEEEEEc---------ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccce-eeeeecccCCCcceeEee
Q 002809 572 RTLGKGGFGTVYYGRLN---------EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNL-TSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~---------~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nI-v~l~g~~~~~~~~~lV~E 641 (878)
+.|+.|....+|+.... +..+.+|+...... ...+.+|..++..+...++ .++++.+.. .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 45778888999999875 36788888744211 1455679999998864444 466666543 38999
Q ss_pred eccCCCh
Q 002809 642 FMANGNL 648 (878)
Q Consensus 642 y~~~gsL 648 (878)
|++|.+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986444
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.66 E-value=0.00045 Score=68.70 Aligned_cols=80 Identities=14% Similarity=0.206 Sum_probs=61.0
Q ss_pred CcEEEEEecCCCccc----cchhhhhccCCCCEEeCcCCcccCc----CCccCCCCc-ceEEEe--cCCcCCCC----Cc
Q 002809 407 PRITYLNLSSSGLKG----DITSYVSNLTSLQFLDLSNNNLTGS----VPDFLSKLP-LRTLNL--QGNKLNGS----VP 471 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g----~ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~-L~~L~l--s~N~l~g~----iP 471 (878)
+.|+.|+|++|+|.. .|...+...++|+.|+|++|+|+.. +...+...+ |+.|+| ++|.++.. +-
T Consensus 65 ~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~ 144 (185)
T 1io0_A 65 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA 144 (185)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH
Confidence 579999999999975 3566677779999999999999854 566677777 999999 88999854 33
Q ss_pred hhhhhcccCCCcccc
Q 002809 472 VELLERSKNGSLSLS 486 (878)
Q Consensus 472 ~~l~~~~~l~~l~l~ 486 (878)
..+...+.|+.|+++
T Consensus 145 ~~L~~n~~L~~L~L~ 159 (185)
T 1io0_A 145 NMLEKNTTLLKFGYH 159 (185)
T ss_dssp HHHHHCSSCCEEECC
T ss_pred HHHHhCCCcCEEecc
Confidence 344445667766554
No 418
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.61 E-value=0.00035 Score=82.15 Aligned_cols=79 Identities=10% Similarity=0.102 Sum_probs=51.4
Q ss_pred CcEEEEEecCCCcccc----chhhhhccCCCCEEeCcCCccc----CcCCccCCCCc-ceEEEecCCcCCCCCchhhhhc
Q 002809 407 PRITYLNLSSSGLKGD----ITSYVSNLTSLQFLDLSNNNLT----GSVPDFLSKLP-LRTLNLQGNKLNGSVPVELLER 477 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~----ip~~~~~l~~L~~L~Ls~N~l~----g~iP~~~~~l~-L~~L~ls~N~l~g~iP~~l~~~ 477 (878)
++|+.|+|++|.+++. ++..+.++++|+.|+|++|+++ +.++..+..++ |+.|+|++|.+.+ +|..+..+
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhh
Confidence 4667777777776655 5556666777777777777776 34454455566 7777777777764 66666666
Q ss_pred ccCCCcccc
Q 002809 478 SKNGSLSLS 486 (878)
Q Consensus 478 ~~l~~l~l~ 486 (878)
++|+.|.++
T Consensus 243 ~~L~~L~l~ 251 (592)
T 3ogk_B 243 ANLEEFCGG 251 (592)
T ss_dssp TTCCEEEEC
T ss_pred hHHHhhccc
Confidence 666655554
No 419
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.57 E-value=0.011 Score=64.18 Aligned_cols=138 Identities=14% Similarity=0.083 Sum_probs=71.8
Q ss_pred cccccccEE-EEEEEEc-ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccc--eeeeeecccCCCcceeEeeeccCCCh
Q 002809 573 TLGKGGFGT-VYYGRLN-EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRN--LTSLVGHCDEDNQTALIYEFMANGNL 648 (878)
Q Consensus 573 ~LG~G~fG~-Vy~~~~~-~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~n--Iv~l~g~~~~~~~~~lV~Ey~~~gsL 648 (878)
.|+.|+... +|+.... +..+++|....... ..+..|+.++..+.... +.+++.+....+ +++||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 455555544 6677664 56677776443221 33456777777775323 445666544333 789999977666
Q ss_pred hhhhcccc---------------------C---CCCCHHHHH-------H-------------HHHHHHHHHHHHH---h
Q 002809 649 QEYLSDIS---------------------K---KVLSSQERL-------R-------------IAVESAQGLEYLH---N 681 (878)
Q Consensus 649 ~~~l~~~~---------------------~---~~l~~~~~~-------~-------------i~~qia~gL~yLH---~ 681 (878)
.+++.... . ..+...... . ....+.+.++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 54432110 0 011111000 0 0011112222221 1
Q ss_pred CCCCCeEecCCCCccEEEcCC----CcEEEeecCCccc
Q 002809 682 GCKPPIVHRDVKSTNILLNEK----LQAKLADFGLSKS 715 (878)
Q Consensus 682 ~~~~~ivHrDLKp~NILl~~~----~~~kL~DFGla~~ 715 (878)
.....++|||+.+.|||++.+ ..+.|.||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 124478999999999999875 6899999998764
No 420
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.52 E-value=0.011 Score=67.22 Aligned_cols=73 Identities=12% Similarity=0.131 Sum_probs=48.4
Q ss_pred ccccccccEEEEEEEEcc--eeEEEEEeccCChhhHHHHHHHHHHHHHhcccce-eeeeecccCCCcceeEeeeccCCCh
Q 002809 572 RTLGKGGFGTVYYGRLNE--IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNL-TSLVGHCDEDNQTALIYEFMANGNL 648 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~--~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nI-v~l~g~~~~~~~~~lV~Ey~~~gsL 648 (878)
+.|+.|-...+|+....+ ..+.+|+....... ...-.+|..++..+...++ .++++.+.. .+|+||+++.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence 467888889999999876 78899987543211 1122589999999875555 466776632 359999987554
Q ss_pred h
Q 002809 649 Q 649 (878)
Q Consensus 649 ~ 649 (878)
.
T Consensus 189 ~ 189 (458)
T 2qg7_A 189 S 189 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 421
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.49 E-value=0.00044 Score=81.35 Aligned_cols=83 Identities=13% Similarity=0.187 Sum_probs=60.2
Q ss_pred CCcEEEEEecCC--Cccccchhhhhc-cCCCCEEeCcCCcccC-cCCccCCCCc-ceEEEecCCcCCCC-Cchhhhhccc
Q 002809 406 SPRITYLNLSSS--GLKGDITSYVSN-LTSLQFLDLSNNNLTG-SVPDFLSKLP-LRTLNLQGNKLNGS-VPVELLERSK 479 (878)
Q Consensus 406 ~~~l~~l~l~~n--~l~g~ip~~~~~-l~~L~~L~Ls~N~l~g-~iP~~~~~l~-L~~L~ls~N~l~g~-iP~~l~~~~~ 479 (878)
.++|+.|+|+.+ .+++..+..++. +++|+.|+|++|++++ .+|..+..++ |+.|+|++|+|++. ++..+..+++
T Consensus 435 ~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~ 514 (592)
T 3ogk_B 435 CKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPS 514 (592)
T ss_dssp CTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSS
T ss_pred CCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCc
Confidence 457888888743 477777777766 7888888888888886 5566667778 88888888888755 4444556777
Q ss_pred CCCcccccC
Q 002809 480 NGSLSLSVG 488 (878)
Q Consensus 480 l~~l~l~~~ 488 (878)
|+.|+++.+
T Consensus 515 L~~L~ls~n 523 (592)
T 3ogk_B 515 LRYLWVQGY 523 (592)
T ss_dssp CCEEEEESC
T ss_pred cCeeECcCC
Confidence 776655443
No 422
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.47 E-value=0.0083 Score=66.55 Aligned_cols=138 Identities=19% Similarity=0.231 Sum_probs=81.2
Q ss_pred ccccccccEEEEEEEEc---------ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccce-eeeeecccCCCcceeEee
Q 002809 572 RTLGKGGFGTVYYGRLN---------EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNL-TSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~---------~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nI-v~l~g~~~~~~~~~lV~E 641 (878)
+.|..|-...+|+.... +..+.+|+.... ......+.+|..+++.+....+ .++++.+.. .+|+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 34666777888988764 267888885332 2234566789999988863333 466666654 29999
Q ss_pred eccCCChhhh-h----------------cccc---CCCCC--HHHHHHHHHHHHH-------------------HHHHHH
Q 002809 642 FMANGNLQEY-L----------------SDIS---KKVLS--SQERLRIAVESAQ-------------------GLEYLH 680 (878)
Q Consensus 642 y~~~gsL~~~-l----------------~~~~---~~~l~--~~~~~~i~~qia~-------------------gL~yLH 680 (878)
|++|.+|..- + |... ..... |.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998665421 1 1111 11122 3444444433321 223332
Q ss_pred ----h-CCCCCeEecCCCCccEEEcCC----CcEEEeecCCcc
Q 002809 681 ----N-GCKPPIVHRDVKSTNILLNEK----LQAKLADFGLSK 714 (878)
Q Consensus 681 ----~-~~~~~ivHrDLKp~NILl~~~----~~~kL~DFGla~ 714 (878)
. .....++|+|+.+.|||++++ +.+.++||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2 123468999999999999887 789999999775
No 423
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.28 E-value=0.012 Score=64.76 Aligned_cols=72 Identities=13% Similarity=0.183 Sum_probs=44.4
Q ss_pred ccccccccEEEEEEEEcc----------eeEEEEEeccCChhhHHHHHHHHHHHHHhcccce-eeeeecccCCCcceeEe
Q 002809 572 RTLGKGGFGTVYYGRLNE----------IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNL-TSLVGHCDEDNQTALIY 640 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~----------~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nI-v~l~g~~~~~~~~~lV~ 640 (878)
+.|+.|....+|+....+ ..+++|+...... .......|.+++..+...++ .++++... -.+||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 356778888999988764 5788887654322 22234678888888864443 35665442 36899
Q ss_pred eeccCCCh
Q 002809 641 EFMANGNL 648 (878)
Q Consensus 641 Ey~~~gsL 648 (878)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987544
No 424
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.95 E-value=0.015 Score=62.69 Aligned_cols=138 Identities=12% Similarity=0.157 Sum_probs=78.7
Q ss_pred cccccccEEEEEEEEcc-eeEEEEEeccCChhhHHHHHHHHHHHHHhcccc--eeeeeec-----ccCCCcceeEeeecc
Q 002809 573 TLGKGGFGTVYYGRLNE-IDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRN--LTSLVGH-----CDEDNQTALIYEFMA 644 (878)
Q Consensus 573 ~LG~G~fG~Vy~~~~~~-~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~n--Iv~l~g~-----~~~~~~~~lV~Ey~~ 644 (878)
.++ |....||+....+ +.+++|+...... ....+..|..++..++... +.+++.. ...++..++|+|+++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 7778999887654 5799999864321 2356677888888885333 3444443 111344578999998
Q ss_pred CCChhh-----------h---hcccc-------CCCCCHHHH----HHH---------------HHHHHHHHHHHHhC--
Q 002809 645 NGNLQE-----------Y---LSDIS-------KKVLSSQER----LRI---------------AVESAQGLEYLHNG-- 682 (878)
Q Consensus 645 ~gsL~~-----------~---l~~~~-------~~~l~~~~~----~~i---------------~~qia~gL~yLH~~-- 682 (878)
|..+.. . +|... ....++... ..+ ...+.+.++.+...
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 755431 0 11100 111222111 001 11111223333221
Q ss_pred --CCCCeEecCCCCccEEEcCCCcEEEeecCCcc
Q 002809 683 --CKPPIVHRDVKSTNILLNEKLQAKLADFGLSK 714 (878)
Q Consensus 683 --~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~ 714 (878)
....++|+|+++.|||++ + .+.|.||+.+.
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 234679999999999999 4 89999998765
No 425
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=95.92 E-value=0.0012 Score=77.63 Aligned_cols=79 Identities=16% Similarity=0.178 Sum_probs=54.5
Q ss_pred CcEEEEEecCCCccccchhhhhc-cCCCCEEeCcCCcccCcCCccC-CCCc-ceEEEecCCcCCCCCchhh-hhcccCCC
Q 002809 407 PRITYLNLSSSGLKGDITSYVSN-LTSLQFLDLSNNNLTGSVPDFL-SKLP-LRTLNLQGNKLNGSVPVEL-LERSKNGS 482 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~-l~~L~~L~Ls~N~l~g~iP~~~-~~l~-L~~L~ls~N~l~g~iP~~l-~~~~~l~~ 482 (878)
++|+.|+|++ ++++..+..++. +++|+.|+|++|.+++..+..+ ..++ |+.|+|++|.+++..+..+ ..+++|+.
T Consensus 432 ~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~ 510 (594)
T 2p1m_B 432 KDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRS 510 (594)
T ss_dssp TTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSE
T ss_pred CCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCE
Confidence 4688888866 777777777776 7888888888888876655444 4566 8888888888854444333 34667776
Q ss_pred cccc
Q 002809 483 LSLS 486 (878)
Q Consensus 483 l~l~ 486 (878)
|+++
T Consensus 511 L~l~ 514 (594)
T 2p1m_B 511 LWMS 514 (594)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 5554
No 426
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.91 E-value=0.0068 Score=56.45 Aligned_cols=53 Identities=32% Similarity=0.496 Sum_probs=28.3
Q ss_pred EEEecCCCcc-ccchhhhhccCCCCEEeCcCCcccCcCC-ccCCCCc-ceEEEecCCcC
Q 002809 411 YLNLSSSGLK-GDITSYVSNLTSLQFLDLSNNNLTGSVP-DFLSKLP-LRTLNLQGNKL 466 (878)
Q Consensus 411 ~l~l~~n~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~-L~~L~ls~N~l 466 (878)
.++.++++|+ ..+|..|. ++|+.|+|++|+|+ .|| ..|..++ |+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCe
Confidence 5666666665 34554321 24666666666666 333 3344455 55555555544
No 427
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=95.87 E-value=0.0016 Score=76.45 Aligned_cols=58 Identities=24% Similarity=0.355 Sum_probs=25.7
Q ss_pred cEEEEEecCC-Ccccc-chhhhhccCCCCEEeCcCCcccCcCCccC----CCCc-ceEEEecCCc
Q 002809 408 RITYLNLSSS-GLKGD-ITSYVSNLTSLQFLDLSNNNLTGSVPDFL----SKLP-LRTLNLQGNK 465 (878)
Q Consensus 408 ~l~~l~l~~n-~l~g~-ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~----~~l~-L~~L~ls~N~ 465 (878)
+|+.|+|++| .++.. ++..+.++++|+.|+|++|.+++..+..+ ..++ |+.|+|++|.
T Consensus 131 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 131 NFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA 195 (594)
T ss_dssp TCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC
T ss_pred CCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC
Confidence 4555555554 33322 33333345555555555555444332222 2333 5555555554
No 428
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.83 E-value=0.03 Score=61.03 Aligned_cols=68 Identities=10% Similarity=0.150 Sum_probs=44.5
Q ss_pred cccccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcc---cceeeeeecc------cCCCcceeEeeeccC
Q 002809 575 GKGGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHH---RNLTSLVGHC------DEDNQTALIYEFMAN 645 (878)
Q Consensus 575 G~G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H---~nIv~l~g~~------~~~~~~~lV~Ey~~~ 645 (878)
|.|....||+....+..+++|+...... ..|+..+..+.. +.+.+.+... ...+..++||+|++|
T Consensus 32 G~g~~N~vy~v~~~~g~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSESKSYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSSCEEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCCCCEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 3444689999987666899998765432 356667766642 2244544332 234667899999998
Q ss_pred CCh
Q 002809 646 GNL 648 (878)
Q Consensus 646 gsL 648 (878)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 766
No 429
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.67 E-value=0.048 Score=55.00 Aligned_cols=102 Identities=17% Similarity=0.202 Sum_probs=67.5
Q ss_pred ChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEEEcCCCcEEEeecCCccccccCCCCcccc
Q 002809 647 NLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNILLNEKLQAKLADFGLSKSFATDANTHVST 726 (878)
Q Consensus 647 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 726 (878)
+|.++|.. .++++++++++.++.|.+.+|.-+-.+.. + ..+=+.|..|++..+|.+...+ ..+.
T Consensus 34 SL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 34 SLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc------------
Confidence 78888874 47889999999999999999887732111 1 1233456899999999988874 2110
Q ss_pred cccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCC
Q 002809 727 VVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPA 767 (878)
Q Consensus 727 ~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p 767 (878)
.....+.|||... ...+.+.-|||+|+++|..+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122456788764 3556788999999999998864433
No 430
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.37 E-value=0.0033 Score=69.36 Aligned_cols=63 Identities=22% Similarity=0.362 Sum_probs=46.8
Q ss_pred CCCcEEEEEecCCCccccchhhhh---ccCCCCEEeCcCCcccCc----CCccCCCCc-ceEEEecCCcCC
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVS---NLTSLQFLDLSNNNLTGS----VPDFLSKLP-LRTLNLQGNKLN 467 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~---~l~~L~~L~Ls~N~l~g~----iP~~~~~l~-L~~L~ls~N~l~ 467 (878)
..++|+.|+|.+|++++..+..+. .+++|+.|+|+.|+|++. ++..+..++ |+.|+|++|.++
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 356888888888888866665555 477888888888888763 455445566 888888888776
No 431
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.00 E-value=0.095 Score=58.35 Aligned_cols=139 Identities=18% Similarity=0.182 Sum_probs=80.3
Q ss_pred ccccccccEEEEEEEEcc---------eeEEEEEeccCChh-----------hH-------HHHHHHHHHHHHhcccc-e
Q 002809 572 RTLGKGGFGTVYYGRLNE---------IDVAVKMLSSSSAQ-----------GF-------QQFQAEVKLLMRVHHRN-L 623 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~~---------~~vAvK~l~~~~~~-----------~~-------~~f~~Ei~~L~~l~H~n-I 623 (878)
+.|..|-...+|+....+ ..|.+++.-..... .+ .....|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 356667888999887753 56788876443211 11 12235888988886444 4
Q ss_pred eeeeecccCCCcceeEeeeccCCChhhh-h----------------cccc---CCCCC--HHHHHHHHHHHH--------
Q 002809 624 TSLVGHCDEDNQTALIYEFMANGNLQEY-L----------------SDIS---KKVLS--SQERLRIAVESA-------- 673 (878)
Q Consensus 624 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~-l----------------~~~~---~~~l~--~~~~~~i~~qia-------- 673 (878)
.++++++..+ +|+||+++-+|..- + |... ..... +....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 4677776532 89999987555321 1 1110 11122 233333333221
Q ss_pred --------------HHH----HHHHhC-CCCCeEecCCCCccEEEcCC------CcEEEeecCCcc
Q 002809 674 --------------QGL----EYLHNG-CKPPIVHRDVKSTNILLNEK------LQAKLADFGLSK 714 (878)
Q Consensus 674 --------------~gL----~yLH~~-~~~~ivHrDLKp~NILl~~~------~~~kL~DFGla~ 714 (878)
+-+ ++|... ....++|+|+.+.|||++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223222 23467999999999999887 789999998764
No 432
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=94.69 E-value=0.019 Score=62.03 Aligned_cols=72 Identities=15% Similarity=0.171 Sum_probs=37.0
Q ss_pred cEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCC-ccCCCCc-ce-EEEecCCcCCCCCc-hhhhhcccCCCc
Q 002809 408 RITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVP-DFLSKLP-LR-TLNLQGNKLNGSVP-VELLERSKNGSL 483 (878)
Q Consensus 408 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~-L~-~L~ls~N~l~g~iP-~~l~~~~~l~~l 483 (878)
+|+.|+|++|+++..-+..|.+|++|+.|+|++| ++ .|+ ..|..+. |+ .|+|.+ +++ .|+ ..+..+.+|+.+
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYV 302 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEE
Confidence 4556666666655222334556666666666655 44 333 3355555 65 666655 444 332 344445555443
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=94.36 E-value=0.035 Score=51.55 Aligned_cols=40 Identities=20% Similarity=0.152 Sum_probs=34.3
Q ss_pred CCCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCccc
Q 002809 405 SSPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLT 444 (878)
Q Consensus 405 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 444 (878)
.+.+|+.|+|++|+|+..-+..|..|++|+.|+|++|.+.
T Consensus 29 lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 29 FPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3458999999999999544567889999999999999876
No 434
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=94.07 E-value=0.037 Score=59.81 Aligned_cols=75 Identities=17% Similarity=0.106 Sum_probs=60.3
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCC-EEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCch-hhhhcccCCC
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQ-FLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPV-ELLERSKNGS 482 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~-~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~-~l~~~~~l~~ 482 (878)
..+|+.|+|++| ++..-+..|.+|++|+ .|+|++ +++-.-+..|..++ |+.|+|++|+++ .|+. .+.++++|+.
T Consensus 249 ~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~-~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 249 KKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT-TLGDELFGNGVPSKL 325 (329)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC-EECTTTTCTTCCCCE
T ss_pred CCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC-ccchhhhcCCcchhh
Confidence 458999999998 7744456899999999 999999 78833357799999 999999999999 5554 6667777665
Q ss_pred c
Q 002809 483 L 483 (878)
Q Consensus 483 l 483 (878)
+
T Consensus 326 l 326 (329)
T 3sb4_A 326 I 326 (329)
T ss_dssp E
T ss_pred h
Confidence 4
No 435
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=93.99 E-value=0.017 Score=56.57 Aligned_cols=80 Identities=14% Similarity=0.100 Sum_probs=58.2
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCc-ccCcCCccCCCC----c-ceEEEecCCc-CCCCCchhhhhccc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNN-LTGSVPDFLSKL----P-LRTLNLQGNK-LNGSVPVELLERSK 479 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~-l~g~iP~~~~~l----~-L~~L~ls~N~-l~g~iP~~l~~~~~ 479 (878)
.+|+.|||+++.++..==..+..|++|+.|+|+++. ++..==..++.+ + |+.|+|+++. +|..==..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999886555668899999999999985 764433345554 4 9999999974 66321234566777
Q ss_pred CCCcccc
Q 002809 480 NGSLSLS 486 (878)
Q Consensus 480 l~~l~l~ 486 (878)
|+.|+++
T Consensus 141 L~~L~L~ 147 (176)
T 3e4g_A 141 LKYLFLS 147 (176)
T ss_dssp CCEEEEE
T ss_pred CCEEECC
Confidence 7766554
No 436
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.78 E-value=0.1 Score=58.56 Aligned_cols=72 Identities=11% Similarity=0.211 Sum_probs=47.2
Q ss_pred ccccccccEEEEEEEEc---------ceeEEEEEeccCChhhHHHHHHHHHHHHHhcccce-eeeeecccCCCcceeEee
Q 002809 572 RTLGKGGFGTVYYGRLN---------EIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNL-TSLVGHCDEDNQTALIYE 641 (878)
Q Consensus 572 ~~LG~G~fG~Vy~~~~~---------~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nI-v~l~g~~~~~~~~~lV~E 641 (878)
+.+..|-...+|+.... +..+.+|+..... .......+|..+++.+...++ .++++.+. -.+|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 34666778889988876 5778888865432 222234678888888863333 45555432 378999
Q ss_pred eccCCCh
Q 002809 642 FMANGNL 648 (878)
Q Consensus 642 y~~~gsL 648 (878)
|++|..|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998664
No 437
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=92.08 E-value=0.065 Score=58.93 Aligned_cols=81 Identities=19% Similarity=0.282 Sum_probs=43.1
Q ss_pred CcEEEEEecCCCccccchhhhh--ccCCCCEEeCcC--CcccCc--C---CccC--CCCc-ceEEEecCCcCCCCCchhh
Q 002809 407 PRITYLNLSSSGLKGDITSYVS--NLTSLQFLDLSN--NNLTGS--V---PDFL--SKLP-LRTLNLQGNKLNGSVPVEL 474 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~--~l~~L~~L~Ls~--N~l~g~--i---P~~~--~~l~-L~~L~ls~N~l~g~iP~~l 474 (878)
++|+.|+|..++++...-..++ +|++|+.|+|+. |+..|. + -..+ ..++ |+.|+|++|++.+..+..+
T Consensus 193 ~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 193 PNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp TTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred CCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 4667777776666554444454 567777777642 222111 1 1112 1345 7777777777665444444
Q ss_pred h---hcccCCCccccc
Q 002809 475 L---ERSKNGSLSLSV 487 (878)
Q Consensus 475 ~---~~~~l~~l~l~~ 487 (878)
. .+++|+.|++++
T Consensus 273 a~a~~~~~L~~LdLs~ 288 (362)
T 2ra8_A 273 LESDILPQLETMDISA 288 (362)
T ss_dssp HHCSSGGGCSEEECCS
T ss_pred HhCccCCCCCEEECCC
Confidence 4 245566555543
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=90.80 E-value=0.063 Score=53.57 Aligned_cols=37 Identities=11% Similarity=0.255 Sum_probs=17.3
Q ss_pred cEEEEEecCC-Cccc----cchhhhhccCCCCEEeCcCCccc
Q 002809 408 RITYLNLSSS-GLKG----DITSYVSNLTSLQFLDLSNNNLT 444 (878)
Q Consensus 408 ~l~~l~l~~n-~l~g----~ip~~~~~l~~L~~L~Ls~N~l~ 444 (878)
.|+.|+|++| +|.. .|-..+..=+.|+.|+|++|+|.
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 3555555553 4432 13333444455555555555554
No 439
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.53 E-value=1.5 Score=48.65 Aligned_cols=28 Identities=43% Similarity=0.593 Sum_probs=24.1
Q ss_pred eEecCCCCccEEE------cCCCcEEEeecCCcc
Q 002809 687 IVHRDVKSTNILL------NEKLQAKLADFGLSK 714 (878)
Q Consensus 687 ivHrDLKp~NILl------~~~~~~kL~DFGla~ 714 (878)
++|+|+.+.|||+ +++..++++||..|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456779999999875
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=87.08 E-value=0.23 Score=49.49 Aligned_cols=59 Identities=14% Similarity=0.227 Sum_probs=44.7
Q ss_pred CcEEEEEecCCCcccc----chhhhhccCCCCEEeCcCCcccCc----CCccCCCCc-ceEEEecCCc
Q 002809 407 PRITYLNLSSSGLKGD----ITSYVSNLTSLQFLDLSNNNLTGS----VPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~-L~~L~ls~N~ 465 (878)
..|+.|+|++|+|... |...+..=+.|+.|+|++|+|+.. |-..+..-+ |+.|+|++|.
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCS
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCc
Confidence 4799999999999843 455566679999999999999843 223344444 9999999763
No 441
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=81.08 E-value=1.3 Score=49.24 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=50.5
Q ss_pred cEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCCccCCCCc-ceEEEecCCcCCCCCch-hhhhcccCCCccc
Q 002809 408 RITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVPDFLSKLP-LRTLNLQGNKLNGSVPV-ELLERSKNGSLSL 485 (878)
Q Consensus 408 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-L~~L~ls~N~l~g~iP~-~l~~~~~l~~l~l 485 (878)
+|+.|.|.+ +++-.-+..|.+|++|+.|+|++|+++ .||...-... |+.+.|.+| ++ .|+. .+..+.+|+.+.+
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CC-EECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hh-eehhhHhhCCCCCCEEec
Confidence 477888875 666444567888888888888888888 6665433345 888888744 55 4443 4556666665554
No 442
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=77.14 E-value=3.2 Score=45.92 Aligned_cols=76 Identities=8% Similarity=0.133 Sum_probs=51.7
Q ss_pred CCcEEEEEecCCCcc-----ccchhhhhccCCCCEEeCcCCcccCcCC-ccCCCCc-ceEEEecCCcCCCCCc-hhhhhc
Q 002809 406 SPRITYLNLSSSGLK-----GDITSYVSNLTSLQFLDLSNNNLTGSVP-DFLSKLP-LRTLNLQGNKLNGSVP-VELLER 477 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~-----g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~-L~~L~ls~N~l~g~iP-~~l~~~ 477 (878)
..+|+.|+|.+|.+. -.-+..|.+|++|+.|+|. |+++ .|+ ..|..+. |+.|+|..| ++ .|+ ..+.++
T Consensus 270 c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~ 345 (401)
T 4fdw_A 270 CPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNT 345 (401)
T ss_dssp CTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSS
T ss_pred CCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCC
Confidence 457888888887765 2335678888999999998 4577 555 4577777 999988655 55 454 345555
Q ss_pred ccCCCcccc
Q 002809 478 SKNGSLSLS 486 (878)
Q Consensus 478 ~~l~~l~l~ 486 (878)
+|+.+.+.
T Consensus 346 -~L~~l~l~ 353 (401)
T 4fdw_A 346 -GIKEVKVE 353 (401)
T ss_dssp -CCCEEEEC
T ss_pred -CCCEEEEc
Confidence 66655443
No 443
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=76.85 E-value=2.8 Score=42.09 Aligned_cols=117 Identities=11% Similarity=0.125 Sum_probs=78.2
Q ss_pred cccceeeeeecccCCCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCccEE
Q 002809 619 HHRNLTSLVGHCDEDNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGCKPPIVHRDVKSTNIL 698 (878)
Q Consensus 619 ~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLKp~NIL 698 (878)
.||+++.. ..-..++...+.|+.-+. ..++-. -+.++...+++++.+|+....+++.. +|--|+|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPFDN---IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTT--SEEGGG---GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcc--cCCHHH---HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEE
Confidence 57877765 344555555555554432 222211 22378899999999999988777644 78899999999
Q ss_pred EcCCCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 002809 699 LNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAISR 770 (878)
Q Consensus 699 l~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~ 770 (878)
++.++.+++.-.|+...+. |. ..++..=.-.+=+++..+++++..|+.
T Consensus 112 f~~~~~p~i~~RGik~~l~-------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVVD-------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp ECTTSCEEESCCEETTTBS-------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EcCCCCEEEEEccCccCCC-------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999888644332 11 011112233577888999999887753
No 444
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=75.89 E-value=3.9 Score=41.13 Aligned_cols=115 Identities=10% Similarity=0.097 Sum_probs=75.9
Q ss_pred cccceeeeeecccCCCcceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEecCCCCccE
Q 002809 619 HHRNLTSLVGHCDEDNQTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLE-YLHNGCKPPIVHRDVKSTNI 697 (878)
Q Consensus 619 ~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~-yLH~~~~~~ivHrDLKp~NI 697 (878)
.||++ -...-..++...+.|+.-+++.=...++ .++...+++++.+|+.... +++ .-+|--|+|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceE
Confidence 57777 3333356666666666554433223333 3788899999999888776 555 347889999999
Q ss_pred EEcCCCcEEEeecCCccccccCCCCcccccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCCC
Q 002809 698 LLNEKLQAKLADFGLSKSFATDANTHVSTVVAGTPGYLDPEYYTSNRLTEKSDVYSFGVVILEIITCKPAIS 769 (878)
Q Consensus 698 Ll~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~ 769 (878)
+++.++.+++.-.|+-..+ +|.-+ ++.-=.-.+=+++..++.++..|+
T Consensus 116 ~f~~~~~p~i~hRGi~~~l-------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL-------------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETTTB-------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCcccC-------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999988864433 22211 111112357788888888887664
No 445
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=70.20 E-value=1.6 Score=31.91 Aligned_cols=15 Identities=27% Similarity=0.437 Sum_probs=6.9
Q ss_pred HHHHHHHhhhhhccc
Q 002809 522 AAALAIFFVLKRKRQ 536 (878)
Q Consensus 522 ~~~~~i~~~~rrk~~ 536 (878)
+++++++++.||+++
T Consensus 26 ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 26 VVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHhhhhHh
Confidence 333344555555443
No 446
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=67.84 E-value=1.3 Score=43.17 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=45.3
Q ss_pred CCCcEEEEEecCCC-ccccchhhhhcc----CCCCEEeCcCC-cccCcCCccCCCCc-ceEEEecCCc
Q 002809 405 SSPRITYLNLSSSG-LKGDITSYVSNL----TSLQFLDLSNN-NLTGSVPDFLSKLP-LRTLNLQGNK 465 (878)
Q Consensus 405 ~~~~l~~l~l~~n~-l~g~ip~~~~~l----~~L~~L~Ls~N-~l~g~iP~~~~~l~-L~~L~ls~N~ 465 (878)
..++|+.|+|+++. |+..-=..|+.+ ++|+.|+|+++ ++|..==..+..++ |+.|+|++..
T Consensus 83 ~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 83 GLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp TCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 45789999999984 775544556665 47999999996 47743223466788 9999999864
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=64.89 E-value=1.9 Score=31.49 Aligned_cols=15 Identities=20% Similarity=0.277 Sum_probs=6.7
Q ss_pred HHHHHHHhhhhhccc
Q 002809 522 AAALAIFFVLKRKRQ 536 (878)
Q Consensus 522 ~~~~~i~~~~rrk~~ 536 (878)
+++.+++++.||+++
T Consensus 25 ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 25 IVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhhhhhh
Confidence 333344455555443
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=63.26 E-value=0.81 Score=51.92 Aligned_cols=58 Identities=9% Similarity=0.065 Sum_probs=16.7
Q ss_pred hcccccccccEEEEEEEEcc--eeEEE------EEeccC--ChhhHHHHHHHHHHHHHhcccceeeeeecc
Q 002809 570 FERTLGKGGFGTVYYGRLNE--IDVAV------KMLSSS--SAQGFQQFQAEVKLLMRVHHRNLTSLVGHC 630 (878)
Q Consensus 570 f~~~LG~G~fG~Vy~~~~~~--~~vAv------K~l~~~--~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~ 630 (878)
+.+.|| ||.||+|.+.. .+||| |..... ..+....|.+|..++...+|+|+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 445676 99999999875 57888 666542 223345788999999999999999987754
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=62.03 E-value=3.6 Score=30.02 Aligned_cols=25 Identities=20% Similarity=0.473 Sum_probs=10.9
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhccc
Q 002809 512 ASVAGSVFLLAAALAIFFVLKRKRQ 536 (878)
Q Consensus 512 ~~v~~~vvll~~~~~i~~~~rrk~~ 536 (878)
++++++++++++.++++++.||+++
T Consensus 16 ~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 16 SAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHhheehhhh
Confidence 3344433333333344455555543
No 450
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=46.92 E-value=1.7e+02 Score=26.65 Aligned_cols=87 Identities=14% Similarity=0.093 Sum_probs=55.2
Q ss_pred ceeEeeccCCCeeEEEEEeeecCCCCCCCCCceeEEEcccee-eEEEecCCcc--ceeeeeEEEEccCCceEEEEeec-C
Q 002809 88 NCYRFNLTKGSRYLIRTNFMYGNYDEKNSVPGFDMFIGPNKW-LSVTFENNAS--FVAIGEIIHILPSDYLHICLVNT-G 163 (878)
Q Consensus 88 nCY~l~~~~~~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w-~~v~~~~~~~--~~~~~e~~~~~~~~~~~vCl~~~-~ 163 (878)
==|++.+.+.|.|-|+..|.=|.. ..-.++|+++|..- .+|.+..... .+....+-+......=.|.|... +
T Consensus 42 v~~~V~v~~aG~Y~l~~ryan~~~----~~~~~~l~VNG~~~~~~v~~p~Tg~w~~w~~~~~~v~L~aG~ntI~l~~~~~ 117 (144)
T 2w47_A 42 IEWNVNAPSSGSYALIFRYANGTT----ANRPMRITVNGNIVKPSMDFVSTGAWTTWNEAGIVANLNQGNNVIRATAIAS 117 (144)
T ss_dssp EEEEEEESSSEEEEEEEEEECCSS----SCCCEEEEETTEEEEEEECCCCCSSTTCCEEEEEEEEECSEEEEEEEEECST
T ss_pred EEEEEECCCCcEEEEEEEEECCCC----CCeEEEEEECCeEeeeEEEecCCCCCCeeEEEEEEEEECCCccEEEEEEeCC
Confidence 347888888899999888764432 24579999999864 5676654321 22112222334444456666543 4
Q ss_pred CCCcceeeeeeeecC
Q 002809 164 LGTPFISALELRPLF 178 (878)
Q Consensus 164 ~~~Pfis~lel~~l~ 178 (878)
.|-|.|-.|+|.+..
T Consensus 118 ~g~~niD~i~v~~~~ 132 (144)
T 2w47_A 118 DGGPNVDYLKVFSAN 132 (144)
T ss_dssp TCCCEEEEEEEEECT
T ss_pred CCCEEEeEEEEEeCC
Confidence 567999999998753
No 451
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=45.31 E-value=22 Score=38.27 Aligned_cols=74 Identities=15% Similarity=0.194 Sum_probs=43.0
Q ss_pred cEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCC-ccCCCCc-ceEEEecCCcCCCCCch-hhhhcccCCCcc
Q 002809 408 RITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVP-DFLSKLP-LRTLNLQGNKLNGSVPV-ELLERSKNGSLS 484 (878)
Q Consensus 408 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~-L~~L~ls~N~l~g~iP~-~l~~~~~l~~l~ 484 (878)
.|+.+.+.++ ++-.-...|.++++|+.+.|.+|.++ .|+ ..|.++. |+.+.|..| ++ .|+. ++.++.+|..+.
T Consensus 264 ~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 264 ALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTIS 339 (379)
T ss_dssp TCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCC
T ss_pred hhcccccccc-ceeccccccccccccccccccccccc-eehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEE
Confidence 4666666543 44222345677777777777777776 454 4466666 777777544 44 4433 345555565544
Q ss_pred c
Q 002809 485 L 485 (878)
Q Consensus 485 l 485 (878)
+
T Consensus 340 i 340 (379)
T 4h09_A 340 Y 340 (379)
T ss_dssp C
T ss_pred E
Confidence 3
No 452
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=44.37 E-value=1.9e+02 Score=26.49 Aligned_cols=85 Identities=14% Similarity=0.125 Sum_probs=53.9
Q ss_pred eEeeccCCCeeEEEEEeeecCCCCCCCCCceeEEEccceeeEEEecCCcc--ceeeeeEEEEccCCceEEEEeec-CCCC
Q 002809 90 YRFNLTKGSRYLIRTNFMYGNYDEKNSVPGFDMFIGPNKWLSVTFENNAS--FVAIGEIIHILPSDYLHICLVNT-GLGT 166 (878)
Q Consensus 90 Y~l~~~~~~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w~~v~~~~~~~--~~~~~e~~~~~~~~~~~vCl~~~-~~~~ 166 (878)
|++.+.+.|.|.|+..|.=|.. ..-.++|+++|..-.+|.+..+.. .+....+-+......=.|=|..+ +.|-
T Consensus 43 ~~V~v~~aG~Y~l~~ryang~~----~~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~L~aG~ntI~l~~~~~~g~ 118 (145)
T 2w3j_A 43 WSLSAASAKTYTAQIRFGNGGT----SARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIPLKAGTNSIKLVAETADGL 118 (145)
T ss_dssp EEEEESSCEEEEEEEEEECCSS----SCCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEEECSEEEEEEEEECSTTCC
T ss_pred EEEECCCCeEEEEEEEEECCCC----CCeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEEECCCceEEEEEEecCcCC
Confidence 7787778999999888752222 234699999999878887754321 12112223333333345555543 4567
Q ss_pred cceeeeeeeecC
Q 002809 167 PFISALELRPLF 178 (878)
Q Consensus 167 Pfis~lel~~l~ 178 (878)
|-|-.|+|.+.+
T Consensus 119 ~niD~i~v~~~~ 130 (145)
T 2w3j_A 119 ANIDSIRVTGNG 130 (145)
T ss_dssp CEEEEEEECSTT
T ss_pred EEEEEEEEEcCC
Confidence 999999998764
No 453
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=42.80 E-value=16 Score=39.77 Aligned_cols=73 Identities=16% Similarity=0.094 Sum_probs=40.5
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCC-ccCCCCc-ceEEEecCCcCCCCCch-hhhhcccCCCc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVP-DFLSKLP-LRTLNLQGNKLNGSVPV-ELLERSKNGSL 483 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~-L~~L~ls~N~l~g~iP~-~l~~~~~l~~l 483 (878)
..|+.+.+.++ ++-.-...|.++++|+.++|.++ ++ .|+ ..|.++. |+.++|..| ++ .|+. .+..+.+|+.+
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i 371 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKV 371 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEE
T ss_pred ccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEE
Confidence 35666666544 44222445677777777777643 55 453 4466666 777777655 44 3432 34444555544
Q ss_pred c
Q 002809 484 S 484 (878)
Q Consensus 484 ~ 484 (878)
.
T Consensus 372 ~ 372 (394)
T 4fs7_A 372 E 372 (394)
T ss_dssp E
T ss_pred E
Confidence 3
No 454
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=38.34 E-value=37 Score=36.77 Aligned_cols=72 Identities=15% Similarity=0.285 Sum_probs=41.7
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCC-ccCCCCc-ceEEEecCCcCCCCCc-hhhhhcccCCCc
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVP-DFLSKLP-LRTLNLQGNKLNGSVP-VELLERSKNGSL 483 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~-L~~L~ls~N~l~g~iP-~~l~~~~~l~~l 483 (878)
..|+.+.+. ++++-.-...|.++++|+.++|.+| ++ .|. ..|..+. |+.+.|..| ++ .|. ..+.++.+|..+
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNI 362 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEE
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEE
Confidence 356666665 4455222346777777777777654 55 443 4466666 777777544 54 443 345556666543
No 455
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=35.09 E-value=2.5e+02 Score=25.44 Aligned_cols=83 Identities=16% Similarity=0.139 Sum_probs=51.8
Q ss_pred eEeeccCCCeeEEEEEeeecCCCCCCCCCceeEEEcccee--eEEEecCCcc--ceeeeeEEEEccCCceEEEEeec-CC
Q 002809 90 YRFNLTKGSRYLIRTNFMYGNYDEKNSVPGFDMFIGPNKW--LSVTFENNAS--FVAIGEIIHILPSDYLHICLVNT-GL 164 (878)
Q Consensus 90 Y~l~~~~~~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w--~~v~~~~~~~--~~~~~e~~~~~~~~~~~vCl~~~-~~ 164 (878)
|++.+.+.|.|.|+..|.-|.. ..-..+|+++|..- .+|.+..... .+....+-+..+...=.|=|... +.
T Consensus 43 ~~V~v~~aG~Y~l~~ryang~~----~~r~~~l~VNG~~~g~~~v~~p~Tg~W~~w~t~~~~v~L~aG~ntI~l~~~~~~ 118 (139)
T 2w87_A 43 WAIDATSSGRRTLTIRYANGGT----ANRNGSLVINGGSNGNYTVSLPTTGAWTTWQTATIDVDLVQGNNIVQLSATTAE 118 (139)
T ss_dssp EEEEESSCEEEEEEEEEECCSS----SCCCEEEEETTTTTCEEEECCCCCSSTTCCEEEEEEEEECSEEEEEEEEESSTT
T ss_pred EEEECCCCcEEEEEEEEECCCC----CCceEEEEECCEEcceeEEEecCCCCCCccEEEEEEEEECCCceEEEEEEcCCC
Confidence 7777778899999888754332 23468999999875 6777754431 22112233333333344555543 34
Q ss_pred CCcceeeeeeee
Q 002809 165 GTPFISALELRP 176 (878)
Q Consensus 165 ~~Pfis~lel~~ 176 (878)
|-|-|-.|+|.+
T Consensus 119 g~~niD~i~v~~ 130 (139)
T 2w87_A 119 GLPNIDSLSVVG 130 (139)
T ss_dssp CCCEEEEEEEES
T ss_pred CCEEEEEEEEec
Confidence 679999999876
No 456
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=34.03 E-value=27 Score=37.88 Aligned_cols=55 Identities=15% Similarity=0.236 Sum_probs=43.4
Q ss_pred CCcEEEEEecCCCccccc-hhhhhccCCCCEEeCcCCcccCcCC-ccCCCCc-ceEEEecCC
Q 002809 406 SPRITYLNLSSSGLKGDI-TSYVSNLTSLQFLDLSNNNLTGSVP-DFLSKLP-LRTLNLQGN 464 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~i-p~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~-L~~L~ls~N 464 (878)
..+|+.++|.++ ++ .| ...|.++++|+.++|..| ++ .|+ ..|..+. |+.++|..|
T Consensus 319 c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 319 CTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 357899999754 66 55 568999999999999877 77 565 5688888 999998754
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=31.47 E-value=1.8e+02 Score=30.87 Aligned_cols=134 Identities=15% Similarity=0.184 Sum_probs=69.1
Q ss_pred cccEEEEEEEEcceeEEEEEeccCChhhHHHHHHHHHHHHHhcccceeeeeec----------------------ccCCC
Q 002809 577 GGFGTVYYGRLNEIDVAVKMLSSSSAQGFQQFQAEVKLLMRVHHRNLTSLVGH----------------------CDEDN 634 (878)
Q Consensus 577 G~fG~Vy~~~~~~~~vAvK~l~~~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~----------------------~~~~~ 634 (878)
+|.+.||....++..+.||-. .....+.+-.++...-.+.-|+.--+.-. ....+
T Consensus 79 ~Gstgvff~~td~~~~VVK~s---~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l~~l~~~ 155 (342)
T 1cja_A 79 KGTEGLFFVETESGVFIVKRS---TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVITTLANQ 155 (342)
T ss_dssp STTSCEEEEEESSCEEEEECC---TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHHHHHTTC
T ss_pred CCCCCeEEEEeCCCEEEEeCc---HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHHHHhhcc
Confidence 334556655556778889944 12233444445554444555542211100 01123
Q ss_pred cceeEeeeccCCChhhhhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCeEe-cCCCCccEEEcCCCc-EEEeecC
Q 002809 635 QTALIYEFMANGNLQEYLSDISKKVLSSQERLRIAVESAQGLEYLHNGC-KPPIVH-RDVKSTNILLNEKLQ-AKLADFG 711 (878)
Q Consensus 635 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-~~~ivH-rDLKp~NILl~~~~~-~kL~DFG 711 (878)
..+++|||.+|..|.+.-.....+.+..+....+. -.-++..+..+. +.+.+. .--.+.|||+++++. +.++|-+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn 233 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK 233 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred cceehhhhcCCCccccchhhhhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence 56799999987666654221111223333222211 123455555443 223322 235789999987654 8899988
Q ss_pred Cccc
Q 002809 712 LSKS 715 (878)
Q Consensus 712 la~~ 715 (878)
++..
T Consensus 234 ~af~ 237 (342)
T 1cja_A 234 IIPL 237 (342)
T ss_dssp CCCC
T ss_pred cccc
Confidence 8753
No 458
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=31.20 E-value=3.1e+02 Score=25.47 Aligned_cols=89 Identities=15% Similarity=0.084 Sum_probs=53.1
Q ss_pred eE-eeccCCCeeEEEEEeeecCCC-----CCC-CCCceeEEEccceeeEEEecCCc--cceeeeeEEEEccCCceEEEEe
Q 002809 90 YR-FNLTKGSRYLIRTNFMYGNYD-----EKN-SVPGFDMFIGPNKWLSVTFENNA--SFVAIGEIIHILPSDYLHICLV 160 (878)
Q Consensus 90 Y~-l~~~~~~~ylvR~~f~ygnyd-----~~~-~~p~Fd~~~~~~~w~~v~~~~~~--~~~~~~e~~~~~~~~~~~vCl~ 160 (878)
++ +.+.+.|+|.|+..|.=|... +.+ ..-..+|+|+|..=.+|.+.... ..+.-..+.+-.....=.|-|.
T Consensus 51 f~~V~~~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~~~~v~fp~Tg~W~~~~~~tv~V~L~aG~NtI~~~ 130 (156)
T 2wz8_A 51 FNNVYVPQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGPEKGHYFFNTRGWNTYRTDIIDVYLNAGNNTIRFY 130 (156)
T ss_dssp EEEEEESSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCCCEEEEECCCSSTTCCEEEEEEEEECSEEEEEEEE
T ss_pred EEEEecCCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCceeeEEEeCCCCCCCcceEEEEEEEECCCceEEEEE
Confidence 44 666789999999887644321 111 23469999998875566665432 2221123333444445666676
Q ss_pred ec--CCCCcceeeeeeeecC
Q 002809 161 NT--GLGTPFISALELRPLF 178 (878)
Q Consensus 161 ~~--~~~~Pfis~lel~~l~ 178 (878)
+. ....|-|-.|+|.++.
T Consensus 131 ~~~~~~~~pdiD~i~v~~~~ 150 (156)
T 2wz8_A 131 NGTSGSYAPNIDKIAIAALE 150 (156)
T ss_dssp CCSTTCBCCEEEEEEEEC--
T ss_pred ecCCCCCCcEEEEEEEeccc
Confidence 65 3447999999998764
No 459
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=30.91 E-value=30 Score=37.15 Aligned_cols=57 Identities=12% Similarity=0.157 Sum_probs=44.3
Q ss_pred CCcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCC-ccCCCCc-ceEEEecCC
Q 002809 406 SPRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVP-DFLSKLP-LRTLNLQGN 464 (878)
Q Consensus 406 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~-L~~L~ls~N 464 (878)
..+|+.+.|.+++++-.-...|.++++|+.+.|.+| ++ .|+ ..|.++. |+.+.|..|
T Consensus 285 c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 285 CSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEECCc
Confidence 357999999999998434578999999999999865 66 565 4577887 988876543
No 460
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=28.30 E-value=3.1e+02 Score=24.12 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=49.7
Q ss_pred CCcceeEeeccCCCeeEEEEEeeecCCCCCCCCCceeEEEccceeeE-EEecCCc--cceeeeeEEEEccCCceEEEEee
Q 002809 85 GIRNCYRFNLTKGSRYLIRTNFMYGNYDEKNSVPGFDMFIGPNKWLS-VTFENNA--SFVAIGEIIHILPSDYLHICLVN 161 (878)
Q Consensus 85 g~~nCY~l~~~~~~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w~~-v~~~~~~--~~~~~~e~~~~~~~~~~~vCl~~ 161 (878)
|..=-|++.+.+.|.|-|+..|.=|. ...-.++|+++|..-.+ |.+.... ..+....+-+......=.|=|..
T Consensus 38 g~~v~~~V~v~~aG~Y~l~~rya~~~----~~~~~~~l~VnG~~~~~~v~~p~tg~W~~w~~~~~~v~L~aG~ntI~l~~ 113 (127)
T 2vzp_A 38 GSSVEWTVTVPSAGTYDVVVRYANGT----TTSRPLDFSVNGSISASGVAFGSTGTWPAWTTKTVRVTLAAGVNKIKAVA 113 (127)
T ss_dssp TCEEEEEEEESSSEEEEEEEEEECCS----SSCCCEEEEETTEEEEEEECCCCCSSTTCCEEEEEEEEECSEEEEEEEEE
T ss_pred CCEEEEEEEcCCCCEEEEEEEEEcCC----CCCeEEEEEECCEEeeeEEEecCCCCCCceEEEEEEEEECCCceEEEEEE
Confidence 34445888888899999998876543 23457999999987543 7664332 11211122233333333344443
Q ss_pred c-CCCCcceeeeee
Q 002809 162 T-GLGTPFISALEL 174 (878)
Q Consensus 162 ~-~~~~Pfis~lel 174 (878)
. +.|.|-|-.|+|
T Consensus 114 ~~~~~~~niD~i~v 127 (127)
T 2vzp_A 114 TTANGGPNVDKITL 127 (127)
T ss_dssp CSTTCCCEEEEEEC
T ss_pred eCCCCCeEEEEEEC
Confidence 2 345677776664
No 461
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=27.64 E-value=53 Score=35.52 Aligned_cols=57 Identities=11% Similarity=0.294 Sum_probs=44.3
Q ss_pred CcEEEEEecCCCccccchhhhhccCCCCEEeCcCCcccCcCC-ccCCCCc-ceEEEecCCcC
Q 002809 407 PRITYLNLSSSGLKGDITSYVSNLTSLQFLDLSNNNLTGSVP-DFLSKLP-LRTLNLQGNKL 466 (878)
Q Consensus 407 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~-L~~L~ls~N~l 466 (878)
.+|+.++|..+ ++-.-...|.+|++|+.+.|.+| ++ .|+ ..|.++. |+.+++.+|..
T Consensus 311 ~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 311 ISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 57889999864 66333568999999999999755 76 665 4588888 99999988754
No 462
>2l3b_A Conserved protein found in conjugate transposon; beta, structural genomics, PSI-biology; NMR {Bacteroides thetaiotaomicron}
Probab=26.68 E-value=68 Score=28.79 Aligned_cols=71 Identities=18% Similarity=0.288 Sum_probs=38.2
Q ss_pred cccCccceeeccccc-ccccc-cCceecc-CCCCccee---EeeccCCCeeEE-EEEe--eecCCCCCCCCCceeEEEcc
Q 002809 56 VETGIGKSILQEFQT-GQQKQ-MRRVRSF-PDGIRNCY---RFNLTKGSRYLI-RTNF--MYGNYDEKNSVPGFDMFIGP 126 (878)
Q Consensus 56 ~~~g~~~~~~~~~~~-~~~~~-~~tlR~F-p~g~~nCY---~l~~~~~~~ylv-R~~f--~ygnyd~~~~~p~Fd~~~~~ 126 (878)
|..|+...|--+-.. +.... .-++||| |+|+--=+ ..+..++-+|.+ +-.| ||=+-. ....+||+++.-
T Consensus 24 I~~GeTvEIR~~L~reG~f~~t~Y~IRYFQ~dGkG~L~~~dg~~l~PND~YpL~~~~FRLYYtS~s--~~~q~idv~veD 101 (130)
T 2l3b_A 24 LKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKMSDGTVLLPNDLYPLPGETFRLYYTSAS--TDQQTVDVYFQD 101 (130)
T ss_dssp CCTTCEEEEEEEEECSSCCSSCCCEEEEECSSCCCEEEETTSCEECTTSCEECSCSEEEEEEECCC--SSCEEEEEEEEC
T ss_pred cCCCCeEEEEEEEecCceecccEEEEEEEeecCCeeEEeCCCCEecCCcccccCcCeEEEEEecCC--CCCceEEEEEEc
Confidence 446777666533222 22222 3799999 78853211 223345556654 2233 554432 334678888887
Q ss_pred ce
Q 002809 127 NK 128 (878)
Q Consensus 127 ~~ 128 (878)
|+
T Consensus 102 nf 103 (130)
T 2l3b_A 102 SF 103 (130)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 463
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=24.82 E-value=22 Score=21.76 Aligned_cols=15 Identities=20% Similarity=0.346 Sum_probs=12.9
Q ss_pred eeecCCCCCCceeec
Q 002809 205 TIRYNDDVHDRSWFP 219 (878)
Q Consensus 205 ~~ryp~D~~dR~W~~ 219 (878)
..|.|.|.|.-+|..
T Consensus 7 llrnpndkyepfwed 21 (26)
T 1nrp_R 7 LLRNPNDKYEPFWED 21 (26)
T ss_pred hhcCCCcccCccccc
Confidence 579999999999953
No 464
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=23.39 E-value=25 Score=21.67 Aligned_cols=15 Identities=20% Similarity=0.346 Sum_probs=13.0
Q ss_pred eeecCCCCCCceeec
Q 002809 205 TIRYNDDVHDRSWFP 219 (878)
Q Consensus 205 ~~ryp~D~~dR~W~~ 219 (878)
..|.|.|.|.-+|..
T Consensus 7 llrnpndkyepfwed 21 (27)
T 1nro_R 7 LLRNPNDKYEPFWED 21 (27)
T ss_pred cccCCCcccCccccc
Confidence 579999999999953
Done!